Citrus Sinensis ID: 017635

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------37
Protein Sequence
MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHHHHcccHHHHHHHHccccccccccccEEEEcccHHHHHHHHHHHHHccEEEEcccccccccHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
cccEHHHHHHHHEEEEHHccccccccHHccccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccEEcccHHHccccHHHHHHHHHHHcHHHHHHccccccccHHHHHHHHHHHcccccccccEEEEEEcccEEccccHHHEHHHHHHHHHHHHHcccccHHHHHHHcccccEEEEEEHHHHHHHEEEccccccccccc
Coil and Loop (DISEMBL)
MNALIWYSWLGGIIIGTMVGANMVLEehckagprnvvitgstrgLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGmmaaggsskknLVHAKVAGiacdvcepadvqklsnfavnefgsidiwinnagtnkgfkpllqFTNEEIEQIVSTNLVGSILCTREAMRVmrdqpkgghifnmdgagsggsstpltavygstkcgLRQLQASLFkeskrskvgvhtaspgmVLTDLLLSGSTIQNKQMFNIICELPETVARTLVprirvvkgsgkainyltpPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILsstgsntfpgt
Flexible Loop (DISEMBL)
MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREfllsgdrvvvasrssesvrmTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLfkeskrskvgvhtaspgmVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVkgsgkainyltpprILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIIlsstgsntfpgt
Low Complexity Region (SEG)
MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDrvvvasrssesvrMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Disordered region (IsUnstruct)
**ALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA*******************************NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM********IF*************LTAVYGSTKCGLRQLQASLF*******VGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILS**********
Disordered Region (DISOPRED)
*NALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYA**********************EMYTENTWVSVFSLSVVCAFIILSST********
Disordered Region (DISEMBL)
MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE********HTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Disordered Region (DISPRO)
*NALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS*********
Transmembrane Helix (TMHMM)
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFPGT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	368	2.2.26 [Sep-21-2011]
Q5N800	504	Probable chlorophyll(ide)	yes	no	0.997	0.728	0.826	0.0
Q93ZA0	496	Probable chlorophyll(ide)	yes	no	1.0	0.741	0.820	0.0
Q84ST4	343	Chlorophyll(ide) b reduct	no	no	0.614	0.658	0.471	7e-55
Q8LEU3	348	Chlorophyll(ide) b reduct	no	no	0.622	0.658	0.464	4e-53
P39483	261	Glucose 1-dehydrogenase 2	no	no	0.502	0.708	0.307	6e-16
Q08632	271	Short-chain type dehydrog	N/A	no	0.540	0.734	0.288	9e-16
P07999	262	Glucose 1-dehydrogenase B	no	no	0.510	0.717	0.299	3e-15
Q6NUE2	236	Carbonyl reductase family	N/A	no	0.483	0.754	0.297	3e-14
Q59787	256	Sorbitol dehydrogenase OS	yes	no	0.489	0.703	0.272	3e-14
O31680	248	Uncharacterized oxidoredu	yes	no	0.480	0.713	0.278	3e-14

>sp|Q5N800|NYC1_ORYSJ Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Oryza sativa subsp. japonica GN=NYC1 PE=1 SV=1

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/368 (82%), Positives = 338/368 (91%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 138 MNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 197

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           V+ASRS ESV  T+ ELEEN++EG+  A    ++ L+HAKV G +CDVC+P DV+KL NF
Sbjct: 198 VIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAKVVGTSCDVCKPEDVKKLVNF 257

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           A +E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNLVGS+LCTREAM VM+ Q KG
Sbjct: 258 AKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNLVGSLLCTREAMNVMQHQQKG 317

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL KES+RSKVGVHTASPGMVLTDLL
Sbjct: 318 GHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKESRRSKVGVHTASPGMVLTDLL 377

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGS+++NKQMFN+ICELPETVARTLVPR+RVVKGSGKAINYLTPPRILLALVTAW+RRG
Sbjct: 378 LSGSSLRNKQMFNLICELPETVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWVRRG 437

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFD++GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS+
Sbjct: 438 RWFDEEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSS 497

Query: 361 GSNTFPGT 368
           G    PGT
Sbjct: 498 G-GPLPGT 504

Required for proper chloroplast degradation. Involved in chlorophyll b degradation.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 9EC: 4

>sp|Q93ZA0|NYC1_ARATH Probable chlorophyll(ide) b reductase NYC1, chloroplastic OS=Arabidopsis thaliana GN=NYC1 PE=1 SV=1

 Score =  635 bits (1637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 302/368 (82%), Positives = 332/368 (90%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN+L+WYSWLGGIIIGTM GANMVLE+H +AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 129 MNSLVWYSWLGGIIIGTMTGANMVLEDHYRAGPRNVVITGSTRGLGKALAREFLLSGDRV 188

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           +V SRSSESV MTV ELE+NLKE M  A  S++K L  AKV GIACDVC+P DV+KLSNF
Sbjct: 189 IVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAKVVGIACDVCKPEDVEKLSNF 248

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL+GSILCTR AM VM  Q  G
Sbjct: 249 AVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNLIGSILCTRGAMDVMSRQHSG 308

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ   S+ KES+++ VG+HTASPGMVLT+LL
Sbjct: 309 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKESQKTNVGLHTASPGMVLTELL 368

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGS+I+NKQMFNIICELPETVARTLVPR+RVVKGSGKA+NYLTPPRILLA+VT+WLRRG
Sbjct: 369 LSGSSIKNKQMFNIICELPETVARTLVPRMRVVKGSGKAVNYLTPPRILLAIVTSWLRRG 428

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADR+RNWAENR R S TDAMEMYTENTWVSVFSLSVVCAFIIL ST
Sbjct: 429 RWFDDQGRALYAAEADRLRNWAENRTRLSLTDAMEMYTENTWVSVFSLSVVCAFIILQST 488

Query: 361 GSNTFPGT 368
             ++FPGT
Sbjct: 489 TPSSFPGT 496

Involved in chlorophyll b degradation.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q84ST4|NOL_ORYSJ Chlorophyll(ide) b reductase NOL, chloroplastic OS=Oryza sativa subsp. japonica GN=NOL PE=1 SV=1

 Score =  214 bits (546), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 116/246 (47%), Positives = 158/246 (64%), Gaps = 20/246 (8%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           P NV+ITGST+G+G ALA+EFL +GD VV+ SRS+E V   VT+L               
Sbjct: 73  PYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVESAVTDL--------------- 117

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEE 151
           KK      V GI CDV E  DV+ L +FA ++   IDIWINNAG+N   +KPL++ ++E 
Sbjct: 118 KKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIWINNAGSNAYSYKPLVETSDEA 177

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
           + ++++TN +G ++C REA+ +MR+QP+GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct: 178 LMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 237

Query: 212 LQASLFKESKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLV 267
           L  SL  E + ++V    VH  SPGMV TDLL+SG+T +  + F NI+ E    VA  LV
Sbjct: 238 LTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTKQAKFFINILAEPANVVADYLV 297

Query: 268 PRIRVV 273
           P IR +
Sbjct: 298 PNIRAI 303

Required for chlorophyll b degradation.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|Q8LEU3|NOL_ARATH Chlorophyll(ide) b reductase NOL, chloroplastic OS=Arabidopsis thaliana GN=NOL PE=2 SV=1

 Score =  208 bits (530), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/250 (46%), Positives = 151/250 (60%), Gaps = 21/250 (8%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           P N++ITGST+G+G ALAREFL +GD VV+ SRS+E V   V  L+E   E         
Sbjct: 79  PYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE--------- 129

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEE 151
                   V G  CDV E  DV++L  ++      IDIWINNAG+N   FKPL + ++E+
Sbjct: 130 -------HVWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDED 182

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
           + ++V TN +G +LC REAM +M  Q +GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct: 183 LIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 242

Query: 212 LQASLFKESKRSKVG---VHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTLV 267
           L  SL  E +   V    VH  SPGMV TDLL+SG+T +  + F N++ E  E VA  LV
Sbjct: 243 LTKSLQAELQMQDVKNVVVHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYLV 302

Query: 268 PRIRVVKGSG 277
           P IR +  SG
Sbjct: 303 PNIRAIPASG 312

Required for chlorophyll b degradation. Chlorophyll b, chlorophyllide b, pheophorbide b and pheophytin b can be used as substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 4

>sp|P39483|DHG2_BACME Glucose 1-dehydrogenase 2 OS=Bacillus megaterium GN=gdhII PE=3 SV=1

 Score = 85.5 bits (210), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 20/205 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT-ELEENLKEGMMAAGGSSKK 94
           VV+TG ++GLG+A+A  F     +VVV  RS+E   + V  E+EE   + ++  G     
Sbjct: 10  VVVTGGSKGLGRAMAVRFGQEQSKVVVNYRSNEEEALEVKKEIEEAGGQAIIVRG----- 64

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                       DV +  DV  L   AV EFGS+D+ INNAG      P  + + E   Q
Sbjct: 65  ------------DVTKEEDVVNLVETAVKEFGSLDVMINNAGVENPV-PSHELSLENWNQ 111

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ +  
Sbjct: 112 VIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMTE 170

Query: 215 SLFKESKRSKVGVHTASPGMVLTDL 239
           +L  E     + V+   PG + T +
Sbjct: 171 TLALEYAPKGIRVNNIGPGAIDTPI 195

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q08632|SDR1_PICAB Short-chain type dehydrogenase/reductase OS=Picea abies PE=2 SV=1

 Score = 84.7 bits (208), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 19/218 (8%)

Query: 32  GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
           G R  ++TG++RG+G+ +A      G +VV+   S++     V  +  N           
Sbjct: 20  GGRVAIVTGASRGIGREIALNMAEKGAKVVIHYSSNQHAAEEVASIINN----------- 68

Query: 92  SKKNLVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFT 148
            K       V  I C  DV EP+ V +L + A + FG + I +NNAG T+  +  L Q +
Sbjct: 69  -KSPSSGDGVRAIVCKADVAEPSQVAQLFDTAEHAFGPLHIVVNNAGVTDSKYPTLAQTS 127

Query: 149 NEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
           +EE ++I   N  G+ LC+REA  RV+R    GG I N+  +       P    Y ++K 
Sbjct: 128 DEEWDRIFQVNCKGAFLCSREAAKRVVRG--GGGRIINISSSLV-AMPIPRYGAYTASKA 184

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
            +  +   L +E + +++  +  +PG V TD+  +G +
Sbjct: 185 AVEMMTRILAQELRGTQITANCVAPGPVATDMFFAGKS 222

Picea abies (taxid: 3329)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|P07999|DHGB_BACME Glucose 1-dehydrogenase B OS=Bacillus megaterium GN=gdhB PE=1 SV=2

 Score = 83.2 bits (204), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 96/204 (47%), Gaps = 16/204 (7%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VVITGS+ GLGK++A  F     +VVV  RS E    +V  LEE +K+            
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEEIKK------------ 55

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
            V  +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 56  -VGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGMENPVSSH-EMSLSDWNKV 113

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 114 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEWKIPWPLFVHYAASKGGMKLMTET 173

Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E     + V+   PG + T +
Sbjct: 174 LALEYAPKGIRVNNIGPGAINTPI 197

Bacillus megaterium (taxid: 1404)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 4

EC: 7

>sp|Q6NUE2|CBR4_XENLA Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1

 Score = 80.1 bits (196), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 24/202 (11%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 97
           + G +RG+GKA+A+       +V V SR+ E  +  VTE+  +L                
Sbjct: 7   VFGGSRGIGKAVAKLLAQKDYKVAVISRNLEVAQAAVTEIGAHL---------------- 50

Query: 98  HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 157
                 ++CDV +  ++Q       N  G+ID  +N+AG ++    LL+  +E+I  ++S
Sbjct: 51  -----ALSCDVSKENEIQCTFKEIKNNLGNIDYLVNSAGISRD-ALLLRTRSEDIMSLLS 104

Query: 158 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 217
            NLVG+I   + A++ M  Q +GG I N+ G+  G       ++YG++K GL     SL 
Sbjct: 105 INLVGTIQTCKVALKGMIQQ-QGGSIVNI-GSIVGHKGNIGQSIYGASKEGLIGFSKSLA 162

Query: 218 KESKRSKVGVHTASPGMVLTDL 239
           KE  +  + V+  +PG + TD+
Sbjct: 163 KEVAKRNIRVNVVAPGFIRTDM 184

The heteroteramer with HSD17B8 has NADH-dependent 3-ketoacyl-acyl carrier protein reductase activity. May play a role in biosynthesis of fatty acids in mitochondria. The homotetramer may act as NADPH-dependent quinone reductase. Has broad substrate specificity and reduces 9,10-phenanthrenequinone, 1,4-benzoquinone and various other o-quinones and p-quinones (in vitro).

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q59787|DHSO_RHOSH Sorbitol dehydrogenase OS=Rhodobacter sphaeroides GN=polS PE=1 SV=1

 Score = 80.1 bits (196), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 22/202 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITGS RG+G+A A  ++  G RV +A  + E+ R T  E                 
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE----------------- 48

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              +      IA DV + A + +     ++ +GSIDI +NNA       P+++ T E  +
Sbjct: 49  ---IGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYD 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G++   +   R M    +GG I NM  + +G     L  VY +TK  +  L 
Sbjct: 105 RLFAINVSGTLFMMQAVARAMIAGGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLT 163

Query: 214 ASLFKESKRSKVGVHTASPGMV 235
            S      R  + V+  +PG+V
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVV 185

Catalyzes the oxidation of D-glucitol (sorbitol) to D-fructose, galactitol to D-tagatose and of L-iditol.

Rhodobacter sphaeroides (taxid: 1063)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|O31680|YKVO_BACSU Uncharacterized oxidoreductase YkvO OS=Bacillus subtilis (strain 168) GN=ykvO PE=3 SV=1

 Score = 79.7 bits (195), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 24/201 (11%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG T G+G A A++F+  G  V +  R    +   V ++ +N                
Sbjct: 10  LVTGGTSGIGLATAQKFVNEGAYVYITGRRQNELDKAVNQIGKN---------------- 53

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
               V G+  D+ +  D+ KL +    E G +DI   NAG    F PL + T E++++  
Sbjct: 54  ----VTGVQGDISKLEDLDKLYDIIKQEKGKLDILFANAGIGN-FLPLGEITEEQVDRTF 108

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+ G+I   ++A+ +  D  K G I  + G+ +G    P  +VYG++K  LR L  + 
Sbjct: 109 DINVKGTIFTVQKALSLFPD--KVGSII-VTGSTAGSIGNPAFSVYGASKAALRALVRNW 165

Query: 217 FKESKRSKVGVHTASPGMVLT 237
             + K +++ V+  SPG +LT
Sbjct: 166 ILDLKGTEIRVNVVSPGGILT 186

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
356520529	514	PREDICTED: probable chlorophyll(ide) b r	0.997	0.714	0.872	0.0
255546477	517	short-chain dehydrogenase, putative [Ric	0.997	0.709	0.899	0.0
449506622	521	PREDICTED: probable chlorophyll(ide) b r	0.994	0.702	0.866	0.0
449464672	521	PREDICTED: probable chlorophyll(ide) b r	0.994	0.702	0.864	0.0
356531269	515	PREDICTED: probable chlorophyll(ide) b r	0.997	0.712	0.855	0.0
224142147	436	predicted protein [Populus trichocarpa]	0.991	0.837	0.888	0.0
225445234	517	PREDICTED: probable chlorophyll(ide) b r	0.997	0.709	0.888	0.0
357500769	514	Oxidoreductase [Medicago truncatula] gi|	0.997	0.714	0.847	0.0
357128420	496	PREDICTED: probable chlorophyll(ide) b r	0.997	0.739	0.831	0.0
242055895	512	hypothetical protein SORBIDRAFT_03g00110	0.997	0.716	0.831	0.0

>gi|356520529|ref|XP_003528914.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max]

 Score =  671 bits (1731), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/368 (87%), Positives = 344/368 (93%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           M+ALIWYSWLGG+IIGTM+GANMVLEEHC+AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 148 MDALIWYSWLGGVIIGTMIGANMVLEEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRV 207

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           +V SRS ESV+ T+ ELEENLKEG+  A GSS   L HAKV GIACDVCEP DVQ+L+NF
Sbjct: 208 IVTSRSPESVQATIKELEENLKEGIANAVGSSLTKLSHAKVVGIACDVCEPHDVQRLANF 267

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNLVGSILCTREAMRVMR+Q   
Sbjct: 268 AVKELGHIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNLVGSILCTREAMRVMRNQAIA 327

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE KRSKVGVHTASPGMVLTDLL
Sbjct: 328 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKECKRSKVGVHTASPGMVLTDLL 387

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGST+QN+QMFNIICELPETVARTLVPR+RVVKG+GKAINYLTPPRILLALVTAWLRRG
Sbjct: 388 LSGSTVQNRQMFNIICELPETVARTLVPRMRVVKGTGKAINYLTPPRILLALVTAWLRRG 447

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADR+RNWAE+RARFSFTDAMEMYTENTW+SVFSLSVVCAFIILSST
Sbjct: 448 RWFDDQGRALYAAEADRLRNWAEDRARFSFTDAMEMYTENTWLSVFSLSVVCAFIILSST 507

Query: 361 GSNTFPGT 368
           GSN  PGT
Sbjct: 508 GSN-LPGT 514

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546477|ref|XP_002514298.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223546754|gb|EEF48252.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  666 bits (1719), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/368 (89%), Positives = 351/368 (95%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGGIIIGTM+GANMVL+EHC+AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 151 MNTLIWYSWLGGIIIGTMIGANMVLDEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRV 210

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           VVASRS ESV  TV ELEENLKEGM+   G+S+ NL HAKV GIAC+VCEP+DVQKL+NF
Sbjct: 211 VVASRSPESVDTTVRELEENLKEGMVTTSGTSRTNLAHAKVVGIACNVCEPSDVQKLANF 270

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV EFGSIDIWINNAGTNKGF+PLLQF++E+I QIVSTNLVGSILCTREAMRV+ +QPKG
Sbjct: 271 AVKEFGSIDIWINNAGTNKGFRPLLQFSDEDINQIVSTNLVGSILCTREAMRVIMNQPKG 330

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE KRSKVGVHTASPGMVLTDLL
Sbjct: 331 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKECKRSKVGVHTASPGMVLTDLL 390

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGST++NKQMFNIICELPETVARTLVPR+RVVKGSGKAINYLTPPRILLALVTAWLR+G
Sbjct: 391 LSGSTLKNKQMFNIICELPETVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWLRQG 450

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADR+RNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST
Sbjct: 451 RWFDDQGRALYAAEADRLRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 510

Query: 361 GSNTFPGT 368
            SN FPGT
Sbjct: 511 -SNPFPGT 517

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449506622|ref|XP_004162801.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Cucumis sativus]

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/368 (86%), Positives = 343/368 (93%), Gaps = 2/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGG+IIGTM+GANMVLEEHC AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 156 MNTLIWYSWLGGVIIGTMIGANMVLEEHCSAGPRNVVITGSTRGLGKALAREFLLSGDRV 215

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           VVASRSSESV+ T+ ELEENLK G+M   GSS K+L HAKV G  C+VC+P DV KL+NF
Sbjct: 216 VVASRSSESVQETLRELEENLK-GLMVRSGSSNKSLAHAKVVGTTCNVCDPEDVHKLANF 274

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
            +NE GSIDIWINNAGTNKGF+PLLQFT+E+I QI+STNLVGS+LCTREAMRVMR+Q KG
Sbjct: 275 TLNELGSIDIWINNAGTNKGFRPLLQFTDEDITQILSTNLVGSLLCTREAMRVMRNQAKG 334

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ+SL KE +RS VGVHTASPGMVLTDLL
Sbjct: 335 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQSSLLKECRRSNVGVHTASPGMVLTDLL 394

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGST++NKQMFNIICELPETVARTLVPR+RVVKG+GKAINYLTPPRILLALVTAWLRRG
Sbjct: 395 LSGSTVRNKQMFNIICELPETVARTLVPRMRVVKGTGKAINYLTPPRILLALVTAWLRRG 454

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADRIRNWAENR RFSFTDAMEMYTENTWVSVFSLSVVCAFIILS+T
Sbjct: 455 RWFDDQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSTT 514

Query: 361 GSNTFPGT 368
            +NT PGT
Sbjct: 515 -NNTLPGT 521

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449464672|ref|XP_004150053.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Cucumis sativus]

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 318/368 (86%), Positives = 342/368 (92%), Gaps = 2/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGG+IIGTM+GANMVLEEHC AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 156 MNTLIWYSWLGGVIIGTMIGANMVLEEHCSAGPRNVVITGSTRGLGKALAREFLLSGDRV 215

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           VVASRSSESV+ T+ ELEENLK G+M   GSS K+L HAKV G  C+VC+P DV KL+NF
Sbjct: 216 VVASRSSESVQETLRELEENLK-GLMVRSGSSNKSLAHAKVVGTTCNVCDPEDVHKLANF 274

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
            +NE GSIDIWINNAGTNKGF+PLLQFT+E+I QI+STNLVGS+LCTREAMRVMR+Q KG
Sbjct: 275 TLNELGSIDIWINNAGTNKGFRPLLQFTDEDITQILSTNLVGSLLCTREAMRVMRNQAKG 334

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           G IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ+SL KE +RS VGVHTASPGMVLTDLL
Sbjct: 335 GQIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQSSLLKECRRSNVGVHTASPGMVLTDLL 394

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGST++NKQMFNIICELPETVARTLVPR+RVVKG+GKAINYLTPPRILLALVTAWLRRG
Sbjct: 395 LSGSTVRNKQMFNIICELPETVARTLVPRMRVVKGTGKAINYLTPPRILLALVTAWLRRG 454

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADRIRNWAENR RFSFTDAMEMYTENTWVSVFSLSVVCAFIILS+T
Sbjct: 455 RWFDDQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSTT 514

Query: 361 GSNTFPGT 368
            +NT PGT
Sbjct: 515 -NNTLPGT 521

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531269|ref|XP_003534200.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Glycine max]

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/368 (85%), Positives = 343/368 (93%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           M+ALIWYSWLGG+IIGTM+GANMVLEEHC+AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 149 MDALIWYSWLGGVIIGTMIGANMVLEEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRV 208

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           +V SRS ESV+ T+ ELEENLKEG+  A GSS   L  AKV GI+CDVCEP DVQ+L+NF
Sbjct: 209 IVTSRSPESVQDTIKELEENLKEGIANAVGSSLTKLSQAKVIGISCDVCEPHDVQRLANF 268

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNLVGSILCTREA+R+MR+Q   
Sbjct: 269 AVKELGHIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNLVGSILCTREAVRIMRNQANA 328

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE KRSKVGVHTASPGMVLTDLL
Sbjct: 329 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKECKRSKVGVHTASPGMVLTDLL 388

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGST+QN+QMFNIICELPETVARTLVPR+RVVKG+GKAINYLTPPRILLAL+TAWLR+G
Sbjct: 389 LSGSTVQNRQMFNIICELPETVARTLVPRMRVVKGTGKAINYLTPPRILLALITAWLRQG 448

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADR+RNWAE+RARFSFTDAMEMYTENTW+SVFSLSVVCAFIILSST
Sbjct: 449 RWFDDQGRALYAAEADRLRNWAEDRARFSFTDAMEMYTENTWLSVFSLSVVCAFIILSST 508

Query: 361 GSNTFPGT 368
           GSN  PGT
Sbjct: 509 GSN-LPGT 515

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142147|ref|XP_002324420.1| predicted protein [Populus trichocarpa] gi|222865854|gb|EEF02985.1| predicted protein [Populus trichocarpa]

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/368 (88%), Positives = 352/368 (95%), Gaps = 3/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGGIIIGTM+GANMVL+EHC+AGPRNVVITGSTRGLGKALAREFLLSGD V
Sbjct: 72  MNTLIWYSWLGGIIIGTMIGANMVLDEHCRAGPRNVVITGSTRGLGKALAREFLLSGDHV 131

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           VVASRS ESV  T+ ELEENLKEGM+ A  S++ +L HAKV GIACDVCEP+DVQKL+NF
Sbjct: 132 VVASRSPESVDTTIRELEENLKEGMITA--SNRTSLAHAKVVGIACDVCEPSDVQKLANF 189

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AVNEFGSIDIWINNAGTNKGF+PLLQFT+E+I+QIVSTNLVGSILCT+EAMR+M +QPKG
Sbjct: 190 AVNEFGSIDIWINNAGTNKGFRPLLQFTDEDIKQIVSTNLVGSILCTQEAMRMMMNQPKG 249

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL KE KRSKVG+HTASPGMVLTDLL
Sbjct: 250 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLLKECKRSKVGIHTASPGMVLTDLL 309

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGST++NKQMFNIICELPETVARTLVPR+RVVKG+GKAI+YLTPPRILLALVTAWLRRG
Sbjct: 310 LSGSTLKNKQMFNIICELPETVARTLVPRMRVVKGTGKAISYLTPPRILLALVTAWLRRG 369

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDDQGRALYAAEADR+RNWAENRA+FSFTDAMEMYTENTWVSVFSLSVVCAFIILSST
Sbjct: 370 RWFDDQGRALYAAEADRLRNWAENRAQFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 429

Query: 361 GSNTFPGT 368
           GS TFPGT
Sbjct: 430 GS-TFPGT 436

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445234|ref|XP_002280953.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic [Vitis vinifera] gi|297738824|emb|CBI28069.3| unnamed protein product [Vitis vinifera]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/368 (88%), Positives = 347/368 (94%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MNALIWYSWLGGIIIGTM+GAN+VLEEHC+AGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 151 MNALIWYSWLGGIIIGTMIGANLVLEEHCRAGPRNVVITGSTRGLGKALAREFLLSGDRV 210

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           VVASRS ESV  TV ELEENLKEGM+ AGG SK NL  AKV GIACDVCEP DVQKL+NF
Sbjct: 211 VVASRSPESVHATVRELEENLKEGMVTAGGPSKTNLERAKVVGIACDVCEPDDVQKLANF 270

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV+EFGSI+IWINNAGTNKGF+PLLQFT+E+I+QIVSTNLVGS+LCT+EA+RVMR Q  G
Sbjct: 271 AVSEFGSINIWINNAGTNKGFRPLLQFTDEDIKQIVSTNLVGSLLCTQEAIRVMRSQGNG 330

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ SL KE KRS VGVHTASPGMVLTDLL
Sbjct: 331 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQGSLLKECKRSNVGVHTASPGMVLTDLL 390

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGSTIQNKQMFNIICELPETVARTLVPR+RVVKG+GKAINYLTPPRILLAL+T WLR+G
Sbjct: 391 LSGSTIQNKQMFNIICELPETVARTLVPRMRVVKGTGKAINYLTPPRILLALITVWLRQG 450

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFD+QGRALYAAEADRIRNWAENR RFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST
Sbjct: 451 RWFDEQGRALYAAEADRIRNWAENRTRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 510

Query: 361 GSNTFPGT 368
           GS +FPGT
Sbjct: 511 GS-SFPGT 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357500769|ref|XP_003620673.1| Oxidoreductase [Medicago truncatula] gi|355495688|gb|AES76891.1| Oxidoreductase [Medicago truncatula]

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/368 (84%), Positives = 338/368 (91%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           M+ALIWYSWLGG+IIGTM+GAN VLE++C+ GPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 148 MDALIWYSWLGGVIIGTMIGANWVLEDYCREGPRNVVITGSTRGLGKALAREFLLSGDRV 207

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           +V SRS ESV+ TV ELEENLKEG+  A GSS   L  AKV GIACDVCE  DVQ+L+NF
Sbjct: 208 IVTSRSPESVQATVKELEENLKEGIANAVGSSLTKLSQAKVVGIACDVCEANDVQRLANF 267

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV+E G IDIWINNAGTNKGF+PLLQF++E+I+QIVSTNLVGSILCTREAMR+MR+Q K 
Sbjct: 268 AVSELGYIDIWINNAGTNKGFRPLLQFSDEDIKQIVSTNLVGSILCTREAMRIMRNQTKP 327

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ   SL  E KRSKVGVHTASPGMVLT+LL
Sbjct: 328 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSLLTECKRSKVGVHTASPGMVLTELL 387

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGSTIQNKQMFNIICELPETVARTLVPR+RVVKG+GKAINYLTPPRILLALVTAWLRRG
Sbjct: 388 LSGSTIQNKQMFNIICELPETVARTLVPRMRVVKGTGKAINYLTPPRILLALVTAWLRRG 447

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDD+GRALY+AEADR+RNWAENRARFSFTDAMEMYTENTW+SVFSLSVVCAFIILSST
Sbjct: 448 RWFDDEGRALYSAEADRLRNWAENRARFSFTDAMEMYTENTWLSVFSLSVVCAFIILSST 507

Query: 361 GSNTFPGT 368
            SN  PGT
Sbjct: 508 SSN-LPGT 514

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357128420|ref|XP_003565871.1| PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic-like [Brachypodium distachyon]

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/368 (83%), Positives = 339/368 (92%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV
Sbjct: 130 MNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 189

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           VVASRS +SV  T++ELEEN++EG+  A    ++ L+ AKV G +CDVC+P DV+KL NF
Sbjct: 190 VVASRSPQSVLQTISELEENIQEGLSVAKKKQREALLQAKVVGTSCDVCKPEDVKKLVNF 249

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           AV+E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNLVGS+LCTREAM VM++Q KG
Sbjct: 250 AVDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNLVGSLLCTREAMDVMQNQEKG 309

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL  ESKRSKVGVHTASPGMVLTDLL
Sbjct: 310 GHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLMTESKRSKVGVHTASPGMVLTDLL 369

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGS++QNKQMFNIICELPETVARTLVPR+RVVKGSGKAINYLTPPRILLALVTAW+RRG
Sbjct: 370 LSGSSLQNKQMFNIICELPETVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWVRRG 429

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFD++GRA+YAAEADRIRNWAE+R RFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS+
Sbjct: 430 RWFDEEGRAVYAAEADRIRNWAESRTRFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSS 489

Query: 361 GSNTFPGT 368
           G   FPGT
Sbjct: 490 G-GPFPGT 496

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242055895|ref|XP_002457093.1| hypothetical protein SORBIDRAFT_03g001100 [Sorghum bicolor] gi|241929068|gb|EES02213.1| hypothetical protein SORBIDRAFT_03g001100 [Sorghum bicolor]

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 306/368 (83%), Positives = 336/368 (91%), Gaps = 1/368 (0%)

Query: 1   MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 60
           MN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD V
Sbjct: 146 MNELIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDHV 205

Query: 61  VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
           V+ SRS ESV  T+TELEEN++EG+  A    +K L HAKV G ACDVC+P DV+KL NF
Sbjct: 206 VITSRSPESVLQTITELEENIQEGLSVAKKKERKILSHAKVVGTACDVCKPEDVKKLVNF 265

Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           A+NE GS+DIWINNAGTNKGF+PL+ F++++I QIVSTNLVGS+LCTREAM VM+ Q KG
Sbjct: 266 AINELGSVDIWINNAGTNKGFRPLVTFSDDDITQIVSTNLVGSLLCTREAMNVMQYQEKG 325

Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ Q SL KES+RSKVGVHTASPGMVLTDLL
Sbjct: 326 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQGSLLKESRRSKVGVHTASPGMVLTDLL 385

Query: 241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
           LSGS+I+NKQMFN+ICELPETVARTLVPR+RVVKGSGKAINYLTPPRILLALVTAW+RRG
Sbjct: 386 LSGSSIRNKQMFNLICELPETVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWVRRG 445

Query: 301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
           RWFDD+GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS+
Sbjct: 446 RWFDDEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSS 505

Query: 361 GSNTFPGT 368
           G    PGT
Sbjct: 506 G-GPLPGT 512

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	368
UNIPROTKB|Q5N800	504	NYC1 "Probable chlorophyll(ide	0.997	0.728	0.798	3.2e-159
TAIR|locus:2119330	496	NYC1 "NON-YELLOW COLORING 1" [	1.0	0.741	0.793	3e-156
UNIPROTKB|Q84ST4	343	NOL "Chlorophyll(ide) b reduct	0.671	0.720	0.423	1.3e-45
TAIR|locus:2175254	348	NOL "NYC1-like" [Arabidopsis t	0.619	0.655	0.438	5e-44
TIGR_CMR|CHY_1306	249	CHY_1306 "oxidoreductase, shor	0.527	0.779	0.298	1.3e-16
UNIPROTKB|F1RIX8	238	CBR4 "Uncharacterized protein"	0.364	0.563	0.323	8.7e-16
UNIPROTKB|Q8N4T8	237	CBR4 "Carbonyl reductase famil	0.413	0.641	0.339	2.9e-15
TIGR_CMR|CHY_1447	247	CHY_1447 "3-oxoacyl-(acyl-carr	0.5	0.744	0.282	7.3e-15
ZFIN|ZDB-GENE-040426-1796	237	cbr4 "carbonyl reductase 4" [D	0.402	0.624	0.309	2e-14
TIGR_CMR|DET_1277	247	DET_1277 "3-oxoacyl-acyl carri	0.388	0.578	0.287	3.1e-14

UNIPROTKB|Q5N800 NYC1 "Probable chlorophyll(ide) b reductase NYC1, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 1551 (551.0 bits), Expect = 3.2e-159, P = 3.2e-159
 Identities = 294/368 (79%), Positives = 327/368 (88%)

Query:     1 MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXX 60
             MN LIWYSWLGG+IIGTM+GAN VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD  
Sbjct:   138 MNTLIWYSWLGGVIIGTMIGANSVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRV 197

Query:    61 XXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
                         T+ ELEEN++EG+  A    ++ L+HAKV G +CDVC+P DV+KL NF
Sbjct:   198 VIASRSPESVLQTINELEENIQEGLSVAKKKQREILLHAKVVGTSCDVCKPEDVKKLVNF 257

Query:   121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
             A +E GSIDIWINNAGTNKGF+PL+ F++E+I QIVSTNLVGS+LCTREAM VM+ Q KG
Sbjct:   258 AKDELGSIDIWINNAGTNKGFRPLVNFSDEDISQIVSTNLVGSLLCTREAMNVMQHQQKG 317

Query:   181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
             GH+FNMDGAGSGGSSTPLTAVYGSTKCGLRQ QASL KES+RSKVGVHTASPGMVLTDLL
Sbjct:   318 GHVFNMDGAGSGGSSTPLTAVYGSTKCGLRQFQASLLKESRRSKVGVHTASPGMVLTDLL 377

Query:   241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
             LSGS+++NKQMFN+ICELPETVARTLVPR+RVVKGSGKAINYLTPPRILLALVTAW+RRG
Sbjct:   378 LSGSSLRNKQMFNLICELPETVARTLVPRMRVVKGSGKAINYLTPPRILLALVTAWVRRG 437

Query:   301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
             RWFD++GRA+YAAEADRIRNWAE+RARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSS+
Sbjct:   438 RWFDEEGRAVYAAEADRIRNWAESRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSS 497

Query:   361 GSNTFPGT 368
             G    PGT
Sbjct:   498 GG-PLPGT 504

GO:0009536 "plastid" evidence=IDA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=IDA

GO:0042170 "plastid membrane" evidence=RCA

TAIR|locus:2119330 NYC1 "NON-YELLOW COLORING 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1523 (541.2 bits), Expect = 3.0e-156, P = 3.0e-156
 Identities = 292/368 (79%), Positives = 321/368 (87%)

Query:     1 MNALIWYSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXX 60
             MN+L+WYSWLGGIIIGTM GANMVLE+H +AGPRNVVITGSTRGLGKALAREFLLSGD  
Sbjct:   129 MNSLVWYSWLGGIIIGTMTGANMVLEDHYRAGPRNVVITGSTRGLGKALAREFLLSGDRV 188

Query:    61 XXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNF 120
                        MTV ELE+NLKE M  A  S++K L  AKV GIACDVC+P DV+KLSNF
Sbjct:   189 IVTSRSSESVDMTVKELEQNLKEIMSNASESARKKLSDAKVVGIACDVCKPEDVEKLSNF 248

Query:   121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
             AV E GSI+IWINNAGTNKGF+PLL+FT E+I QIVSTNL+GSILCTR AM VM  Q  G
Sbjct:   249 AVKELGSINIWINNAGTNKGFRPLLEFTEEDITQIVSTNLIGSILCTRGAMDVMSRQHSG 308

Query:   181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
             GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ   S+ KES+++ VG+HTASPGMVLT+LL
Sbjct:   309 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQFHGSIVKESQKTNVGLHTASPGMVLTELL 368

Query:   241 LSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG 300
             LSGS+I+NKQMFNIICELPETVARTLVPR+RVVKGSGKA+NYLTPPRILLA+VT+WLRRG
Sbjct:   369 LSGSSIKNKQMFNIICELPETVARTLVPRMRVVKGSGKAVNYLTPPRILLAIVTSWLRRG 428

Query:   301 RWFDDQGRALYAAEADRIRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSST 360
             RWFDDQGRALYAAEADR+RNWAENR R S TDAMEMYTENTWVSVFSLSVVCAFIIL ST
Sbjct:   429 RWFDDQGRALYAAEADRLRNWAENRTRLSLTDAMEMYTENTWVSVFSLSVVCAFIILQST 488

Query:   361 GSNTFPGT 368
               ++FPGT
Sbjct:   489 TPSSFPGT 496

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IC

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=IMP

GO:0015996 "chlorophyll catabolic process" evidence=IMP

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q84ST4 NOL "Chlorophyll(ide) b reductase NOL, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 113/267 (42%), Positives = 154/267 (57%)

Query:    12 GIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXX 71
             GI    + G   V        P NV+ITGST+G+G ALA+EFL +GD             
Sbjct:    52 GIRAEAVPGGGGVARRAAMVPPYNVLITGSTKGIGYALAKEFLKAGDNVVICSRSAERVE 111

Query:    72 MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW 131
               VT+L               KK      V GI CDV E  DV+ L +FA ++   IDIW
Sbjct:   112 SAVTDL---------------KKEFGEQHVWGIVCDVREGKDVKALVDFARDKMKYIDIW 156

Query:   132 INNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 190
             INNAG+N   +KPL++ ++E + ++++TN +G ++C REA+ +MR+QP+GGHIFN+DGAG
Sbjct:   157 INNAGSNAYSYKPLVETSDEALMEVITTNTLGLMICCREAINMMRNQPRGGHIFNIDGAG 216

Query:   191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG---VHTASPGMVLTDLLLSGSTIQ 247
             S G  TP  A YG+TK  +  L  SL  E + ++V    VH  SPGMV TDLL+SG+T +
Sbjct:   217 SDGRPTPRFAAYGATKRSVVHLTKSLQAELQMNEVNNVMVHNLSPGMVTTDLLMSGATTK 276

Query:   248 NKQMF-NIICELPETVARTLVPRIRVV 273
               + F NI+ E    VA  LVP IR +
Sbjct:   277 QAKFFINILAEPANVVADYLVPNIRAI 303

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

TAIR|locus:2175254 NOL "NYC1-like" [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 110/251 (43%), Positives = 146/251 (58%)

Query:    33 PRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSS 92
             P N++ITGST+G+G ALAREFL +GD               V  L+E   E         
Sbjct:    79 PYNILITGSTKGIGYALAREFLKAGDNVVICSRSAERVETAVQSLKEEFGE--------- 129

Query:    93 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEE 151
                  H  V G  CDV E  DV++L  ++      IDIWINNAG+N   FKPL + ++E+
Sbjct:   130 -----H--VWGTKCDVTEGKDVRELVAYSQKNLKYIDIWINNAGSNAYSFKPLAEASDED 182

Query:   152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL-- 209
             + ++V TN +G +LC REAM +M  Q +GGHIFN+DGAGS G  TP  A YG+TK  +  
Sbjct:   183 LIEVVKTNTLGLMLCCREAMNMMLTQSRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVH 242

Query:   210 --RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPETVARTL 266
               + LQA L  +  ++ V VH  SPGMV TDLL+SG+T +  + F N++ E  E VA  L
Sbjct:   243 LTKSLQAELQMQDVKNVV-VHNLSPGMVTTDLLMSGATTKQAKFFINVLAEPAEVVAEYL 301

Query:   267 VPRIRVVKGSG 277
             VP IR +  SG
Sbjct:   302 VPNIRAIPASG 312

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=TAS

GO:0015996 "chlorophyll catabolic process" evidence=IDA

GO:0034256 "chlorophyll(ide) b reductase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

TIGR_CMR|CHY_1306 CHY_1306 "oxidoreductase, short chain dehydrogenase/reductase family" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 186 (70.5 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
 Identities = 62/208 (29%), Positives = 101/208 (48%)

Query:    80 NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 139
             N +EG  AA    +K L   +V  I CDV + AD++KL +     +G IDI +N AG N 
Sbjct:    39 NKEEGEKAALQLREKGL---EVYSIPCDVGKVADIKKLVSEVYGRYGRIDILVNCAGVNV 95

Query:   140 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 199
               KP+ ++T E+   +V  NL G+     EA + M  Q K G I N+          P  
Sbjct:    96 R-KPIEEYTEEDWNYMVDINLKGTFFACIEAGKHMIAQ-KEGVIVNLASI-QAEEVLPER 152

Query:   200 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
              +Y +TK G++QL  +L  E  +  + V+  SP  + T+++     +Q+    N+I    
Sbjct:   153 GIYATTKGGVKQLTKALAVEWAKYNIRVNAVSPAFIKTEMV--EKVLQDPYWGNLI---- 206

Query:   260 ETVARTLVPRIRVVKGSGKAINYLTPPR 287
               + +T + R    +   +AI +L  P+
Sbjct:   207 --INKTPMRRPGTPEEVAEAILFLVSPK 232

GO:0008152 "metabolic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=ISS

UNIPROTKB|F1RIX8 CBR4 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 177 (67.4 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
 Identities = 44/136 (32%), Positives = 73/136 (53%)

Query:   104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 163
             ++CDV +  DVQ          G ++  +N AG N     L++ + E++   + TNL+GS
Sbjct:    53 LSCDVAKEQDVQSTFEEIEKNLGPVNFLVNAAGINSRDNLLVRTSTEDMLCQLQTNLLGS 112

Query:   164 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 223
             +L  + A++ M  Q +GG I N+ G+  G    P  +VY ++K GL     +L KE  + 
Sbjct:   113 MLTCKAAVKTMIKQ-QGGSIVNI-GSVVGLKGNPGQSVYSASKGGLVGFSRALAKEVAKK 170

Query:   224 KVGVHTASPGMVLTDL 239
             K+ V+  +PG V TD+
Sbjct:   171 KIRVNVVAPGFVHTDM 186

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0044598 "doxorubicin metabolic process" evidence=IEA

GO:0044597 "daunorubicin metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003955 "NAD(P)H dehydrogenase (quinone) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8N4T8 CBR4 "Carbonyl reductase family member 4" [Homo sapiens (taxid:9606)]

 Score = 177 (67.4 bits), Expect = 2.9e-15, Sum P(2) = 2.9e-15
 Identities = 56/165 (33%), Positives = 83/165 (50%)

Query:    77 LEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 136
             +  NL EG  AA G    +  H      +CDV +  DVQ          G ++  +N AG
Sbjct:    32 IARNL-EGAKAAAGDLGGD--HL---AFSCDVAKEHDVQNTFEELEKHLGRVNFLVNAAG 85

Query:   137 TNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGS 194
              N+ G   L++   E++   + TNL+GS+L  + AMR M  Q +GG I N+    G  G+
Sbjct:    86 INRDGL--LVRTKTEDMVSQLHTNLLGSMLTCKAAMRTMIQQ-QGGSIVNVGSIVGLKGN 142

Query:   195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             S    +VY ++K GL     +L KE  R K+ V+  +PG V TD+
Sbjct:   143 SGQ--SVYSASKGGLVGFSRALAKEVARKKIRVNVVAPGFVHTDM 185

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008753 "NADPH dehydrogenase (quinone) activity" evidence=ISS;IDA

GO:0048038 "quinone binding" evidence=ISS;IDA

GO:0070402 "NADPH binding" evidence=ISS;IDA

GO:0005759 "mitochondrial matrix" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0044597 "daunorubicin metabolic process" evidence=IMP

GO:0003955 "NAD(P)H dehydrogenase (quinone) activity" evidence=IDA

GO:0044598 "doxorubicin metabolic process" evidence=IMP

GO:0051289 "protein homotetramerization" evidence=IPI

TIGR_CMR|CHY_1447 CHY_1447 "3-oxoacyl-(acyl-carrier-protein) reductase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 193 (73.0 bits), Expect = 7.3e-15, P = 7.3e-15
 Identities = 58/205 (28%), Positives = 103/205 (50%)

Query:    36 VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
             V++TG++RG+G+ +A  F L+G              +  ++L+E L+         SK  
Sbjct:     8 VLVTGASRGIGRKIAERFALAG---AKVGINYAHNDLLASQLKEELE---------SKG- 54

Query:    96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                A+V  +  DV +  +V+++    V  FG IDI +NNAG  K  K LL+ + ++ + +
Sbjct:    55 ---AEVLLVKGDVSQKEEVERIFKELVTTFGKIDIVVNNAGITKD-KLLLRMSYDDFDSV 110

Query:   156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQA 214
             + TNL  + L TREA ++M  Q + G I N+    G  G++    A Y ++K  +     
Sbjct:   111 IKTNLYSTFLVTREAAKIMLKQ-RFGRIINISSVVGIKGNAGQ--ANYAASKAAIIGFTK 167

Query:   215 SLFKESKRSKVGVHTASPGMVLTDL 239
             ++  E     + V+  +PG + TD+
Sbjct:   168 AVALELASRGITVNAVAPGYIKTDM 192

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

ZFIN|ZDB-GENE-040426-1796 cbr4 "carbonyl reductase 4" [Danio rerio (taxid:7955)]

 Score = 173 (66.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
 Identities = 47/152 (30%), Positives = 78/152 (51%)

Query:    88 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 147
             A  S+ ++L      G++CDV +  +VQK         G++   +N AG N+    LL+ 
Sbjct:    38 AAQSTAQSLPGENHLGLSCDVSKEEEVQKAFETINKTCGTVGFLVNAAGINRDAL-LLRS 96

Query:   148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
              +E++  ++ TNL+GS+L  + A+R M     GG I N+ G+  G        VY ++K 
Sbjct:    97 KSEDMLSVLHTNLLGSMLTCKAAVRNMLSH--GGAIVNI-GSVVGVKGNAGQCVYSASKA 153

Query:   208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             GL     SL KE     + V+  +PG++ TD+
Sbjct:   154 GLEGFTRSLAKEVASRNIRVNLVAPGLIHTDM 185

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

TIGR_CMR|DET_1277 DET_1277 "3-oxoacyl-acyl carrier protein reductase" [Dehalococcoides ethenogenes 195 (taxid:243164)]

 Score = 169 (64.5 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
 Identities = 42/146 (28%), Positives = 71/146 (48%)

Query:   104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 163
             +  DV + + V  L   A   FG +DI +NNAG  +  +  ++ + E+ + ++ TNL   
Sbjct:    59 VQADVSQSSGVDALFKAAQEAFGGVDILVNNAGITRD-QLTMRLSEEDWDSVIQTNLKSV 117

Query:   164 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 223
              LC++ A+R M    + G I N+     G    P  A Y + K G+     SL KE    
Sbjct:   118 FLCSKAALRQMLKN-RWGRIINLSSI-VGLKGNPGQANYAAAKAGILGFSCSLAKEVASR 175

Query:   224 KVGVHTASPGMVLTDLLLSGSTIQNK 249
              + V++ +PG + TD+  + S  Q +
Sbjct:   176 NITVNSIAPGFIETDMTAALSEEQRQ 201

GO:0004316 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5N800	NYC1_ORYSJ	1, ., 1, ., 1, ., 2, 9, 4	0.8260	0.9972	0.7281	yes	no
Q93ZA0	NYC1_ARATH	1, ., 1, ., 1, ., 2, 9, 4	0.8206	1.0	0.7419	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.294	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	368
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-49
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	9e-35
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-34
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	5e-33
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-30
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-28
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	1e-28
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-28
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	6e-28
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-27
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-27
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-27
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-26
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-26
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	5e-26
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-25
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-25
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	8e-25
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-24
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-24
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-24
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-24
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-24
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	7e-24
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-23
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	6e-23
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	7e-23
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-22
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-22
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-22
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	2e-22
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-22
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-22
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	4e-22
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-22
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-21
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-21
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	1e-21
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-21
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-21
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-21
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	4e-21
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	8e-21
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-20
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-20
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	5e-20
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	1e-19
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-19
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-19
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	2e-19
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-19
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-19
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-19
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-19
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	5e-19
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	7e-19
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-18
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-18
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-18
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	3e-18
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-18
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	5e-18
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	6e-18
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	7e-18
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-17
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-17
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-17
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-17
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-17
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-17
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-17
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-17
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-17
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-17
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	8e-17
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	8e-17
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	9e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-16
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-16
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-16
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-16
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-16
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-16
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	5e-16
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	5e-16
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	8e-16
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-15
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-15
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-15
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-15
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-15
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	4e-15
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	4e-15
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	5e-15
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	5e-15
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	8e-15
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-14
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-14
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-14
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	1e-14
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-14
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-14
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	2e-14
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	6e-14
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	6e-14
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	6e-14
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	7e-14
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	8e-14
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	1e-13
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-13
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	1e-13
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-13
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	4e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-13
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	4e-13
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	5e-13
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	5e-13
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	6e-13
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-13
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	1e-12
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	2e-12
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	3e-12
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	4e-12
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	5e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	5e-12
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	6e-12
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	7e-12
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	7e-12
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	8e-12
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	1e-11
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-11
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-11
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-11
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-11
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-11
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-11
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	5e-11
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	7e-11
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	9e-11
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	1e-10
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-10
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-10
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-10
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-10
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-10
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-10
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-10
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	3e-10
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-10
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-10
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-10
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	4e-10
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	5e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-10
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-10
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	6e-10
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	9e-10
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-09
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	3e-09
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	3e-09
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	4e-09
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	4e-09
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	5e-09
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	6e-09
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	6e-09
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-09
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	7e-09
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	7e-09
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	8e-09
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-09
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	1e-08
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-08
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	3e-08
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-08
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	3e-08
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	3e-08
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	4e-08
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-08
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	7e-08
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	1e-07
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-07
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-07
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-07
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	2e-07
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	2e-07
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-07
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	2e-07
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-07
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-07
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	2e-07
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	3e-07
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-07
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	7e-07
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	9e-07
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-06
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-06
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-06
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-06
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-06
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	4e-06
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	6e-06
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	7e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	7e-06
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	8e-06
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-05
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-05
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	3e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	5e-05
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	6e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	8e-05
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	1e-04
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-04
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-04
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	2e-04
pfam08659	181	pfam08659, KR, KR domain	4e-04
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	5e-04
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	6e-04
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	8e-04
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	0.001
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	0.001
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	0.001
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.001
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.002
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	0.002
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	0.002
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.004
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	0.004

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  165 bits (420), Expect = 2e-49
 Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 26/237 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++ G+G+A+AR     G +VV+A R+ E++     EL      G           
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALA----ELAAIEALG----------- 45

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  DV +  DV+ L   A+ EFG +DI +NNAG      PL + T+E+ +++
Sbjct: 46  ---GNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNAGIA-RPGPLEELTDEDWDRV 101

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G  L TR A+  M+ Q  GG I N+          P  A Y ++K  L  L  S
Sbjct: 102 LDVNLTGVFLLTRAALPHMKKQ-GGGRIVNISSVAGLRPL-PGQAAYAASKAALEGLTRS 159

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-----NIICELPETVARTLV 267
           L  E     + V+  +PG+V T +L      + ++             PE VA  +V
Sbjct: 160 LALELAPYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVV 216

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  128 bits (322), Expect = 9e-35
 Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 20/208 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++ G+G+A+AR     G RVVVA+R SE       E  E L   +  AGG   
Sbjct: 6   KVALVTGASSGIGRAIARALAREGARVVVAARRSEE------EAAEALAAAIKEAGG--- 56

Query: 94  KNLVHAKVAGIACDV-CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                 + A +A DV  +   V+ L   A  EFG IDI +NNAG      PL + T E+ 
Sbjct: 57  -----GRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDW 111

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++++  NL+G+ L TR A+ +M+ Q     I N+  + +G    P  A Y ++K  L  L
Sbjct: 112 DRVIDVNLLGAFLLTRAALPLMKKQ----RIVNI-SSVAGLGGPPGQAAYAASKAALIGL 166

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             +L  E     + V+  +PG + T + 
Sbjct: 167 TKALALELAPRGIRVNAVAPGYIDTPMT 194

Length = 251

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  126 bits (319), Expect = 3e-34
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 23/222 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++ G+G+ +AR F   G RVVV  R+ E+      E+          AGG   
Sbjct: 6   KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL---------AGG--- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +A DV + ADV+     A+  FGS+DI +NNAGT     PLL     E +
Sbjct: 54  ------RAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFD 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +I + N+    L T+ A+  MR +  GG I N+     G    P    Y ++K  +  L 
Sbjct: 108 RIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVASTA-GLRPRPGLGWYNASKGAVITLT 165

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQNKQMF 252
            +L  E    K+ V+  +P +V T L    +   T +N+  F
Sbjct: 166 KALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKF 207

Length = 251

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  123 bits (311), Expect = 5e-33
 Identities = 64/275 (23%), Positives = 117/275 (42%), Gaps = 28/275 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+G  LA++    G  +++ +R        +  L + L+           
Sbjct: 7   KTALITGASSGIGAELAKQLARRGYNLILVARR----EDKLEALAKELE----------D 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           K  V  +V  I  D+ +P  +++L +      G ID+ +NNAG    F P L+ + +E E
Sbjct: 53  KTGVEVEV--IPADLSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEE 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  N++     T+  +  M ++   GHI N+ G+ +G   TP  AVY +TK  +    
Sbjct: 110 EMIQLNILALTRLTKAVLPGMVER-GAGHIINI-GSAAGLIPTPYMAVYSATKAFVLSFS 167

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP----- 268
            +L +E K + V V    PG   T+   +  +         +   PE VA   +      
Sbjct: 168 EALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKG 227

Query: 269 -RIRVVKGSGKAIN---YLTPPRILLALVTAWLRR 299
            R  +     KA+     L P  +   L     ++
Sbjct: 228 KREIIPGLPNKALALSFRLLPRSLREKLAGKIFKK 262

Length = 265

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  114 bits (289), Expect = 6e-30
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 19/211 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G+A+A      G  VV+   SSE+         E L   + A GG   
Sbjct: 6   KVALVTGASRGIGRAIAERLAAQGANVVINYASSEA-------GAEALVAEIGALGG--- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   +  DV +   V++  + A  EFG +DI +NNAG  +    L++   E+ +
Sbjct: 56  ------KALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD-NLLMRMKEEDWD 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ TNL G    T+   R M  Q + G I N+  +  G    P  A Y ++K G+    
Sbjct: 109 RVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINI-SSVVGLMGNPGQANYAASKAGVIGFT 166

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGS 244
            SL +E     + V+  +PG + TD+  +  
Sbjct: 167 KSLARELASRGITVNAVAPGFIETDMTDALP 197

Length = 248

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (280), Expect = 1e-28
 Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 24/225 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            ++TG++ G+G+A+A      G +VV+A   + E+ +  + E++E               
Sbjct: 8   AIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-------------- 53

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                    +  DV    DV+ L    V +FG IDI +NNAG +  F  +   T+EE ++
Sbjct: 54  ---GGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDR 109

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++  NL G +L TR A+  M  + K G I N+     G        +Y ++K  +     
Sbjct: 110 VIDVNLTGVMLLTRYALPYMIKR-KSGVIVNISSIW-GLIGASCEVLYSASKGAVNAFTK 167

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
           +L KE   S + V+  +PG + T++    S+   +    +  E+P
Sbjct: 168 ALAKELAPSGIRVNAVAPGAIDTEM---WSSFSEEDKEGLAEEIP 209

Length = 247

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 1e-28
 Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 20/204 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+  G+G  +A      G +VV+A  + E+       L++        AGG     
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK--------AGG----- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               K  G+A DV +   +    ++AV  FG +DI +NNAG  +   P+  F  E+ +++
Sbjct: 54  ----KAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGI-QHVAPIEDFPTEKWKKM 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++  L G+ L T+ A+ +M+ Q  GG I NM  +  G   +   A Y S K GL  L   
Sbjct: 109 IAIMLDGAFLTTKAALPIMKAQ-GGGRIINM-ASVHGLVGSAGKAAYVSAKHGLIGLTKV 166

Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           +  E     V V+   PG V T L
Sbjct: 167 VALEGATHGVTVNAICPGYVDTPL 190

Length = 258

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  110 bits (277), Expect = 2e-28
 Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 22/211 (10%)

Query: 30  KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 89
               +  +ITG++ G+G+A AR    +G +VV+A+R  E     +  L + +  G     
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREE----RLEALADEIGAG----- 53

Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
                         +A DV + A V+        EFG IDI +NNAG   G  PL +   
Sbjct: 54  ----------AALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG-DPLDEADL 102

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           ++ ++++ TN+ G +  TR  +  M ++ K GHI N+ G+ +G    P  AVYG+TK  +
Sbjct: 103 DDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINL-GSIAGRYPYPGGAVYGATKAAV 160

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           R     L +E   + + V   SPG+V T   
Sbjct: 161 RAFSLGLRQELAGTGIRVTVISPGLVETTEF 191

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 6e-28
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG + G+G ALA      G RV+  +R+ + +            E +      +   
Sbjct: 3   VLITGCSSGIGLALALALAAQGYRVIATARNPDKL------------ESLGELLNDN--- 47

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                +  +  DV +   ++      +  FG ID+ +NNAG    F PL + + EE+ ++
Sbjct: 48  -----LEVLELDVTDEESIKAAVKEVIERFGRIDVLVNNAGYG-LFGPLEETSIEEVREL 101

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              N+ G +  TR  + +MR Q   G I N+  + +G   TP    Y ++K  L  L  S
Sbjct: 102 FEVNVFGPLRVTRAFLPLMRKQ-GSGRIVNV-SSVAGLVPTPFLGPYCASKAALEALSES 159

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L  E     + V    PG V T   
Sbjct: 160 LRLELAPFGIKVTIIEPGPVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  108 bits (272), Expect = 2e-27
 Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 20/222 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G+A+A      G +VV+   + E+      EL         AAGG   
Sbjct: 6   KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR--------AAGG--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +  DV + A V+ L   AV  FG++DI +NNAG       L + + E+ +
Sbjct: 55  ------EARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGIT-RDALLPRMSEEDWD 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL G+    R A+  M    + G I N+  + SG +  P    Y + K G+    
Sbjct: 108 RVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNI-SSVSGVTGNPGQTNYSAAKAGVIGFT 165

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 255
            +L  E     + V+  +PG + TD+          ++   I
Sbjct: 166 KALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEI 207

Length = 246

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 2e-27
 Identities = 67/206 (32%), Positives = 93/206 (45%), Gaps = 28/206 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++TG TRG+G  +AR FL +G  VVV  R                       G    
Sbjct: 7   RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRR----------------APETVDG---- 46

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                      A DV +P  V  L +  V   G +D+ +NNAG +  +    + +    E
Sbjct: 47  -----RPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHE 100

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +IV  NL+  +L  + A  VM+ QP GG I N+ G+ SG   +P TA YG+ K GL  L 
Sbjct: 101 KIVELNLLAPLLVAQAANAVMQQQPGGGSIVNI-GSVSGRRPSPGTAAYGAAKAGLLNLT 159

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            SL  E    KV V+    G+V T+ 
Sbjct: 160 RSLAVEWA-PKVRVNAVVVGLVRTEQ 184

Length = 252

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  107 bits (270), Expect = 3e-27
 Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 30/212 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++ G+GKA+A     +G  VVV  RS E          E + E + A GG  K
Sbjct: 4   KVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDA-------AEEVVEEIKAVGG--K 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              V A       DV +  DV  L   A+ EFG++DI +NNAG         + T E+  
Sbjct: 55  AIAVQA-------DVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGDA-SSHEMTLEDWN 106

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKC 207
           +++  NL G  LC REA++  R     G I NM       SS       P    Y ++K 
Sbjct: 107 KVIDVNLTGQFLCAREAIKRFRKSKIKGKIINM-------SSVHEKIPWPGHVNYAASKG 159

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           G++ +  +L +E     + V+  +PG + T +
Sbjct: 160 GVKMMTKTLAQEYAPKGIRVNAIAPGAINTPI 191

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  105 bits (264), Expect = 2e-26
 Identities = 63/210 (30%), Positives = 102/210 (48%), Gaps = 23/210 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++TG++RG+G+A+A+     G  VVV  + S  +    V E+E        AAGG     
Sbjct: 7   LVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIE--------AAGG----- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               K   +  DV +P+ V +L + A   FG +DI +NNAG     KP+ + + EE +++
Sbjct: 54  ----KAIAVQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML-KKPIAETSEEEFDRM 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            + N  G+    +EA + +RD   GG I N+  +    + TP    Y  +K  +      
Sbjct: 109 FTVNTKGAFFVLQEAAKRLRD---GGRIINI-SSSLTAAYTPNYGAYAGSKAAVEAFTRV 164

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGST 245
           L KE     + V+  +PG V TD+  +G T
Sbjct: 165 LAKELGGRGITVNAVAPGPVDTDMFYAGKT 194

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  104 bits (261), Expect = 4e-26
 Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 27/251 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG +RG+GKA+A      G  VV+  R S+       +    +   +   GG     
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSK-------DAAAEVAAEIEELGG----- 48

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               K   +  DV +P DV+++       FG +D+ ++NA     F+PL + T    +  
Sbjct: 49  ----KAVVVRADVSQPQDVEEMFAAVKERFGRLDVLVSNAAAG-AFRPLSELTPAHWDAK 103

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++TNL   + C ++A ++MR++  GG I  +   GS  +     AV G+ K  L  L   
Sbjct: 104 MNTNLKALVHCAQQAAKLMRER-GGGRIVAISSLGSIRALPNYLAV-GTAKAALEALVRY 161

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG 275
           L  E     + V+  SPG++ TD L            N    L    A T   R+   + 
Sbjct: 162 LAVELGPRGIRVNAVSPGVIDTDAL--------AHFPNREDLLEAAAANTPAGRVGTPQD 213

Query: 276 SGKAINYLTPP 286
              A+ +L   
Sbjct: 214 VADAVGFLCSD 224

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 5e-26
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 22/203 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V++TG   G+G+A+A  F  +G RV V   S  ++  T   L                
Sbjct: 12  LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-------------- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                AKV     DV +PA V+++ + AV  FG +D+ +NNAG       + + T E+ E
Sbjct: 58  -----AKVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWE 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 212
           Q ++ NL G     R A+ +++    GG I  +   AG  G   P    Y ++K  +  L
Sbjct: 113 QTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--YPGRTPYAASKWAVVGL 170

Query: 213 QASLFKESKRSKVGVHTASPGMV 235
             SL  E     + V+   PG+V
Sbjct: 171 VKSLAIELGPLGIRVNAILPGIV 193

Length = 264

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  102 bits (256), Expect = 2e-25
 Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 21/217 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++RG+G+A+A +    G +V++  RSSE       E  E + E + A G      
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE-------EGAEEVVEELKAYGV----- 48

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 154
               K  G+ CDV +  DV+ +      E G IDI +NNAG T      L++   E+ + 
Sbjct: 49  ----KALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRDNL--LMRMKEEDWDA 102

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++ TNL G    T+  +R+M  Q + G I N+  +  G       A Y ++K G+     
Sbjct: 103 VIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINI-SSVVGLMGNAGQANYAASKAGVIGFTK 160

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 251
           SL KE     + V+  +PG + TD+    S    K++
Sbjct: 161 SLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKI 197

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  102 bits (256), Expect = 3e-25
 Identities = 63/211 (29%), Positives = 94/211 (44%), Gaps = 27/211 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG +RG+G A+AR    +G  V +   S+          EE  +E        +K
Sbjct: 9   KVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAP-------RAEEKAEE-------LAK 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           K  V  K     CDV     V+K       +FG IDI I NAG     KP L +T E+  
Sbjct: 55  KYGVKTKA--YKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVH-KPALDYTYEQWN 111

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST----PLT-AVYGSTKCG 208
           +++  NL G   C + A ++ + Q KG  I       +  S T    P   A Y ++K  
Sbjct: 112 KVIDVNLNGVFNCAQAAAKIFKKQGKGSLIIT-----ASMSGTIVNRPQPQAAYNASKAA 166

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           +  L  SL  E  +  + V++ SPG + TDL
Sbjct: 167 VIHLAKSLAVEWAKYFIRVNSISPGYIDTDL 197

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score =  103 bits (258), Expect = 8e-25
 Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 24/183 (13%)

Query: 30  KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 89
             G + VVITG++ G+G+A AR F   G +VV+ +R  E +     E+         AAG
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIR--------AAG 56

Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
           G         +   +  DV +   VQ  ++ A  E G ID W+NNA     F P    T 
Sbjct: 57  G---------EALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTP 106

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKC 207
           EE  ++     +G +  T  A+R MR +   G I  +   GS  +  S PL + Y + K 
Sbjct: 107 EEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQV---GSALAYRSIPLQSAYCAAKH 162

Query: 208 GLR 210
            +R
Sbjct: 163 AIR 165

Length = 334

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  100 bits (251), Expect = 1e-24
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 22/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G+A+A      G +V V  RS E+   TV E++        A GG   
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIK--------ALGG--- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                   A +  DV +   V+ L      EFG +DI +NNAG T      L++ + E+ 
Sbjct: 50  ------NAAALEADVSDREAVEALVEKVEAEFGPVDILVNNAGITRDNL--LMRMSEEDW 101

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + +++ NL G    T+  +R M  + + G I N+  +  G    P  A Y ++K G+   
Sbjct: 102 DAVINVNLTGVFNVTQAVIRAMIKR-RSGRIINI-SSVVGLIGNPGQANYAASKAGVIGF 159

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             SL KE     + V+  +PG + TD+
Sbjct: 160 TKSLAKELASRGITVNAVAPGFIDTDM 186

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  100 bits (251), Expect = 1e-24
 Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 20/206 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           ++V+ITG + G+GKALA+E +  G  V++ +RS   +   V E+E             ++
Sbjct: 2   KHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIE-------------AE 48

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
            N    KV+ I+ D+ +  +V++    AV + G  D+ +N AG +         T EE E
Sbjct: 49  ANASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISI-PGLFEDLTAEEFE 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 211
           + +  N  GS+      + +M++Q + GHI  +    S  +   +   + Y  +K  LR 
Sbjct: 108 RGMDVNYFGSLNVAHAVLPLMKEQ-RPGHIVFV---SSQAALVGIYGYSAYCPSKFALRG 163

Query: 212 LQASLFKESKRSKVGVHTASPGMVLT 237
           L  SL +E K   + V    P    T
Sbjct: 164 LAESLRQELKPYNIRVSVVYPPDTDT 189

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =   99 bits (250), Expect = 2e-24
 Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 21/206 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSS 92
           R  ++TG+ RGLG+A+A     +G  VVV  RS E      V  +E              
Sbjct: 7   RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL------------ 54

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +   +  DV + A ++     AV  FG IDI +NNAG  +  KPL   +++E 
Sbjct: 55  -----GRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED-KPLADMSDDEW 108

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++++  NL G     R  +  MR Q +GG I N+  + +G    P  + Y + K GL  L
Sbjct: 109 DEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNI-SSVAGLPGWPGRSNYAAAKAGLVGL 166

Query: 213 QASLFKESKRSKVGVHTASPGMVLTD 238
             +L +E     + V+  +PG + TD
Sbjct: 167 TKALARELAEYGITVNMVAPGDIDTD 192

Length = 249

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 99.9 bits (249), Expect = 2e-24
 Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 22/207 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+  G+G A A      G RVVVA     + +  V ++          AGG+    
Sbjct: 6   AIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQI----------AGGA---- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  DV +   V  L   AV EFG +D+ +NNAG       ++       +Q 
Sbjct: 52  ------LALRVDVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQT 105

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ NL G+ LC R A   M  +  GG I N+  + +G S  P    YG++K  +R L  +
Sbjct: 106 MAINLRGTFLCCRHAAPRMIAR-GGGSIVNLS-SIAGQSGDPGYGAYGASKAAIRNLTRT 163

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLS 242
           L  E + + +  +  +PG++ T LLL+
Sbjct: 164 LAAELRHAGIRCNALAPGLIDTPLLLA 190

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 98.9 bits (247), Expect = 3e-24
 Identities = 66/245 (26%), Positives = 108/245 (44%), Gaps = 36/245 (14%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 97
           ITG ++G+G A+A   L  G +V + +R  + +     EL                    
Sbjct: 11  ITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN------------------ 52

Query: 98  HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 157
              V G+A DV + ADVQ+  +  V  FG +D+ I NAG    F P+ + T EE   ++ 
Sbjct: 53  KGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVID 111

Query: 158 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQAS 215
           TNL G+    + A+  ++    GG+I N+    S   +      A Y ++K GL     +
Sbjct: 112 TNLTGAFYTIKAAVPALKRG--GGYIINI---SSLAGTNFFAGGAAYNASKFGLVGFSEA 166

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGST--------IQNKQMFNIICELPETVARTLV 267
              + ++  + V T  PG V T    +G T        IQ + +  ++ +L +   RTL 
Sbjct: 167 AMLDLRQYGIKVSTIMPGSVATH--FNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTLP 224

Query: 268 PRIRV 272
            +I V
Sbjct: 225 SKIEV 229

Length = 237

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 98.7 bits (246), Expect = 6e-24
 Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 23/225 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG T+G+G A+  E    G  V   +R+ +       EL+E L E         +
Sbjct: 7   KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQK-------ELDECLTE-------WRE 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEI 152
           K     KV G  CDV   ++ Q+L +   + FG  ++I +NNAGTN   K    +T E+ 
Sbjct: 53  KGF---KVEGSVCDVSSRSERQELMDTVASHFGGKLNILVNNAGTNI-RKEAKDYTEEDY 108

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
             I+STN   +   +R A  +++    G  +F    + +G  + P  A YG+TK  L QL
Sbjct: 109 SLIMSTNFEAAYHLSRLAHPLLKASGNGNIVFI--SSVAGVIAVPSGAPYGATKGALNQL 166

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 257
             SL  E  +  + V+  +P ++ T L+     IQ K+  + + E
Sbjct: 167 TRSLACEWAKDNIRVNAVAPWVIATPLV--EPVIQQKENLDKVIE 209

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 98.2 bits (245), Expect = 7e-24
 Identities = 60/193 (31%), Positives = 93/193 (48%), Gaps = 20/193 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VVITG++ G+G+A A  F   G +VV+A+RS+E++     E+ E         GG     
Sbjct: 3   VVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRE--------LGG----- 49

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV + A V++ ++ AV  FG ID W+NNAG    F      T EE  ++
Sbjct: 50  ----EAIAVVADVADAAQVERAADTAVERFGRIDTWVNNAGVAV-FGRFEDVTPEEFRRV 104

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              N +G +  T  A+  +R +  GG + N+ G+  G  S PL A Y ++K  +R    S
Sbjct: 105 FDVNYLGHVYGTLAALPHLRRR-GGGALINV-GSLLGYRSAPLQAAYSASKHAVRGFTES 162

Query: 216 LFKESKRSKVGVH 228
           L  E       + 
Sbjct: 163 LRAELAHDGAPIS 175

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 97.4 bits (243), Expect = 2e-23
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 22/206 (10%)

Query: 35  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            V+ITG++ G+G+A AR F  +G ++++  R +E ++    EL                 
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFP------------ 49

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                KV  +  DV +   ++        EF  IDI +NNAG   G  P  +   E+ E 
Sbjct: 50  ----VKVLPLQLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWET 105

Query: 155 IVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++ TN+ G +  TR  + +M  R+Q   GHI N+ G+ +G        VY +TK  +RQ 
Sbjct: 106 MIDTNVKGLLNVTRLILPIMIARNQ---GHIINL-GSIAGRYPYAGGNVYCATKAAVRQF 161

Query: 213 QASLFKESKRSKVGVHTASPGMVLTD 238
             +L K+   + + V    PG+V T+
Sbjct: 162 SLNLRKDLIGTGIRVTNIEPGLVETE 187

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 95.9 bits (239), Expect = 6e-23
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 20/207 (9%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            +  ++TG+  G+G A+AR    +G  VVV     E          +        AGGS 
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGD--------AGGS- 51

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                   V  +  DV +  ++  +   A  EFG +DI +NNAG      P+ +F  E+ 
Sbjct: 52  --------VIYLPADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDW 102

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++I++  L  +    R A+  M+ Q   G I N+  +  G  ++P  + Y + K GL  L
Sbjct: 103 DRIIAVMLTSAFHTIRAALPHMKKQ-GWGRIINI-ASAHGLVASPFKSAYVAAKHGLIGL 160

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
              L  E     + V+   PG V T L
Sbjct: 161 TKVLALEVAEHGITVNAICPGYVRTPL 187

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 95.8 bits (239), Expect = 7e-23
 Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 30/215 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ RGLG A A     +G  V      +   R     LE        AAGG   
Sbjct: 8   KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALE--------AAGG--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   IA D+ +PA VQ+  + A    G +D  +NNAG     K   +   +  +
Sbjct: 57  ------RAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS-KSATELDIDTWD 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL-----TAVYGSTKCG 208
            +++ N+ G+ L  R A+  +RD    G I N+       S T L        Y ++K  
Sbjct: 110 AVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNL------ASDTALWGAPKLGAYVASKGA 162

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
           +  +  SL +E     + V+  +PG+  T+     
Sbjct: 163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYV 197

Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 95.1 bits (237), Expect = 1e-22
 Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG+ +G+G+A+A      G  +V+A  + E          + + E    AG ++ 
Sbjct: 3   KVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEE---AAKSTIQEISE----AGYNA- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A  A    DV +  DV+ L + AV +FGS D+ +NNAG      PLL  T E+++
Sbjct: 55  ----VAVGA----DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLK 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G +   + A R  +    GG I N   + +G    P    Y ++K  +R L 
Sbjct: 106 KVYAVNVFGVLFGIQAAARQFKKLGHGGKIINA-SSIAGVQGFPNLGAYSASKFAVRGLT 164

Query: 214 ASLFKESKRSKVGVHTASPGMVLT 237
            +  +E     + V+  +PG+V T
Sbjct: 165 QTAAQELAPKGITVNAYAPGIVKT 188

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 95.0 bits (237), Expect = 1e-22
 Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 21/208 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+ RG+G+A+A      G  V+V     +    T   +E        AAGG   
Sbjct: 7   RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE--------AAGG--- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                 K      DV + A ++      V +FG +DI + NAG       P  +  +E+ 
Sbjct: 56  ------KARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLT--PFAEMDDEQW 107

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           E+++  NL G+ L T+ A+  +     GG I             P  A Y ++K GL   
Sbjct: 108 ERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGF 166

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             +L  E     + V++  PG V T + 
Sbjct: 167 TRALALELAARNITVNSVHPGGVDTPMA 194

Length = 251

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 94.1 bits (234), Expect = 2e-22
 Identities = 66/246 (26%), Positives = 105/246 (42%), Gaps = 37/246 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++RG+G+A AR     G RV + +R    +     +  E                
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEG--------------- 47

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                V G+A DV + ADV++  +     FG +D  +NNAG     KP+ + T EE   +
Sbjct: 48  -----VLGLAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGV-MKPVEELTPEEWRLV 101

Query: 156 VSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQL 212
           + TNL G+  C  +A   ++R    GG I N+   GS          A Y ++K GL  L
Sbjct: 102 LDTNLTGAFYCIHKAAPALLRRG--GGTIVNV---GSLAGKNAFKGGAAYNASKFGLLGL 156

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGST------IQNKQMFNIICELPETVARTL 266
             +   + + + + V    PG V T    +GS       +  + +   +    E  AR L
Sbjct: 157 SEAAMLDLREANIRVVNVMPGSVDTG--FAGSPEGQAWKLAPEDVAQAVLFALEMPARAL 214

Query: 267 VPRIRV 272
           V RI +
Sbjct: 215 VSRIEL 220

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 94.4 bits (235), Expect = 2e-22
 Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 22/234 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG   G+G+A AR F   G RVV+A            ++++        AG +    L
Sbjct: 8   IITGGASGIGEATARLFAKHGARVVIA------------DIDD-------DAGQAVAAEL 48

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-LLQFTNEEIEQI 155
               ++ + CDV   ADV+   + AV  FG +DI  NNAG        +L+ + EE E++
Sbjct: 49  GDPDISFVHCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERV 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  N+ G+ L T+ A RVM    KG  +     AG  G   P    Y ++K  +  L  S
Sbjct: 109 LDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGP--HAYTASKHAVLGLTRS 166

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 269
              E     + V+  SP  V T LL +G  ++++ +   +          L P 
Sbjct: 167 AATELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPE 220

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 94.4 bits (235), Expect = 3e-22
 Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 32/209 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VVITG + GLG+A+A  F     +VV+  RS E       E   ++ E +  AGG +   
Sbjct: 10  VVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE-------EEANDVAEEIKKAGGEAIA- 61

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQ 154
            V         DV   +DV  L   AV EFG++D+ INNAG  N    P  + + E+  +
Sbjct: 62  -VKG-------DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENA--VPSHEMSLEDWNK 111

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------PLTAVYGSTKCG 208
           +++TNL G+ L +REA++   +    G+I NM       SS       PL   Y ++K G
Sbjct: 112 VINTNLTGAFLGSREAIKYFVEHDIKGNIINM-------SSVHEQIPWPLFVHYAASKGG 164

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLT 237
           ++ +  +L  E     + V+   PG + T
Sbjct: 165 VKLMTETLAMEYAPKGIRVNNIGPGAINT 193

Length = 261

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 94.0 bits (234), Expect = 3e-22
 Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 43/267 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +N +ITG+ RG+G+A+A      G  V + +R+ E+++    E+E               
Sbjct: 8   KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-------------- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV     DV +  +V        NE GSIDI INNAG +K F   L+    E E
Sbjct: 54  ---YGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWE 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 212
           +I+  NL+G    TR  +  M ++ + G I N+   AG  G    +T+ Y ++K G+  L
Sbjct: 110 KIIQVNLMGVYYATRAVLPSMIER-QSGDIINISSTAGQKG--AAVTSAYSASKFGVLGL 166

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLS-GSTIQN--KQMFNIICELPETVARTLVPR 269
             SL +E ++  + V   +P  V TD+ +  G T  N  K M       PE +A  +V +
Sbjct: 167 TESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDGNPDKVM------QPEDLAEFIVAQ 220

Query: 270 IRVVKGSGKAINYLTPPRILLALVTAW 296
           +++              R  +     W
Sbjct: 221 LKL------------NKRTFIKSAGLW 235

Length = 239

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 93.1 bits (232), Expect = 4e-22
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 26/208 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           +  ++TG+ RG+G  + R+   SG   V++ +R  E  +  V +L               
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE------------ 48

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEE 151
                   V     DV + A ++  ++F   ++G +DI +NNAG   KGF        E+
Sbjct: 49  -----GLSVRFHQLDVTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTR-EQ 102

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
             + + TN  G++  T+  + +++ +   G I N+    SG  S  LT+ YG +K  L  
Sbjct: 103 ARETMKTNFFGTVDVTQALLPLLK-KSPAGRIVNV---SSGLGS--LTSAYGVSKAALNA 156

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L   L KE K + + V+   PG V TD+
Sbjct: 157 LTRILAKELKETGIKVNACCPGWVKTDM 184

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 96.8 bits (241), Expect = 5e-22
 Identities = 65/209 (31%), Positives = 102/209 (48%), Gaps = 22/209 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++TG+  G+G+A  + F  +GD+VVVA R+ E  R    E  ++L     A      
Sbjct: 6   RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERAR----ERADSLGPDHHA------ 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                     +A DV + A +++       EFG ID+ +NNAG T+      L  T EE 
Sbjct: 56  ----------LAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEF 105

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            ++ + NL G+ L  REA+R+M +Q  G  I N+  +G+G  + P    Y ++K  +  L
Sbjct: 106 ARLQAINLTGAYLVAREALRLMIEQGHGAAIVNV-ASGAGLVALPKRTAYSASKAAVISL 164

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLL 241
             SL  E     + V+   PG V T ++ 
Sbjct: 165 TRSLACEWAAKGIRVNAVLPGYVRTQMVA 193

Length = 520

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 92.5 bits (230), Expect = 1e-21
 Identities = 61/205 (29%), Positives = 99/205 (48%), Gaps = 24/205 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           VV+TGS RG+G+A+A      G  VVV A + +E +  T+  ++EN  EG+         
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGI--------- 59

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                   G+  DV      + L+   ++ +G  DI +NNAG    F P L   ++ I++
Sbjct: 60  --------GVLADVSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDK 110

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            +ST+    I C++E  + MR+   GG I N+  + +G       ++YG+ K  +  L  
Sbjct: 111 HISTDFKSVIYCSQELAKEMRE---GGAIVNI-ASVAGIRPAYGLSIYGAMKAAVINLTK 166

Query: 215 SLFKESKRSKVGVHTASPGMVLTDL 239
            L  E    K+ V+  +PG V T L
Sbjct: 167 YLALELA-PKIRVNAIAPGFVKTKL 190

Length = 252

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 92.4 bits (229), Expect = 1e-21
 Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 19/208 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+GK +A  ++ +G +V +A+R  +++     E+            G   
Sbjct: 10  KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEI---------GTSG--- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV  + CDV +   V  + +    E G IDI + NAG      P+L    EE +
Sbjct: 58  -----GKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGI-ITVTPMLDMPLEEFQ 111

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAVYGSTKCGLRQL 212
           ++ +TN+ G  L  + A + M  Q +GG I N         + P   + Y ++K  +  L
Sbjct: 112 RLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHL 171

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             ++  E    K+ V++ SPG +LT+L+
Sbjct: 172 TKAMAVELAPHKIRVNSVSPGYILTELV 199

Length = 253

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 91.3 bits (227), Expect = 1e-21
 Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 24/215 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G  +AR     G RV +  R+ E +                A+GG   
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALS------------ASGG--- 45

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V  +  D  +P D + L +   + FG ID+ ++NAG       L + ++ E+E
Sbjct: 46  ------DVEAVPYDARDPEDARALVDALRDRFGRIDVLVHNAGIG-RPTTLREGSDAELE 98

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
              S N++     TR  +  +R+    G +  ++ + SG       A Y ++K  LR L 
Sbjct: 99  AHFSINVIAPAELTRALLPALREAGS-GRVVFLN-SLSGKRVLAGNAGYSASKFALRALA 156

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN 248
            +L +E     V V    PG V T +    + +  
Sbjct: 157 HALRQEGWDHGVRVSAVCPGFVDTPMAQGLTLVGA 191

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 91.9 bits (229), Expect = 2e-21
 Identities = 55/208 (26%), Positives = 83/208 (39%), Gaps = 38/208 (18%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
             ITG   G+GKA+A+ F   G  V +A R  E +     E+         +A G     
Sbjct: 6   AFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEIS--------SATG----- 52

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN----------KGFKPLL 145
               +   I CDV +P  V+   +  + EFG IDI INNA  N           GFK   
Sbjct: 53  ---GRAHPIQCDVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFK--- 106

Query: 146 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 205
                    ++  +L G+   T+   + + +   GG I N+  A    + +P      + 
Sbjct: 107 --------TVIDIDLNGTFNTTKAVGKRLIEAKHGGSILNI-SATYAYTGSPFQVHSAAA 157

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPG 233
           K G+  L  SL  E     + V+  +PG
Sbjct: 158 KAGVDALTRSLAVEWGPYGIRVNAIAPG 185

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 91.3 bits (227), Expect = 2e-21
 Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 24/207 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G  +A     +G  +V+ SR+ E        +E   KEG+        
Sbjct: 6   KVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIE---KEGV-------- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +     CDV +   ++        +FG IDI +NNAG  +   P  +F   E  
Sbjct: 55  ------EATAFTCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIR-RHPAEEFPEAEWR 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKCGLRQ 211
            ++  NL G    ++   R M  Q   G I N+    S  S    P    Y ++K G+  
Sbjct: 108 DVIDVNLNGVFFVSQAVARHMIKQ-GHGKIINI---CSLLSELGGPPVPAYAASKGGVAG 163

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTD 238
           L  +L  E  R  + V+  +PG   T+
Sbjct: 164 LTKALATEWARHGIQVNAIAPGYFATE 190

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 90.7 bits (226), Expect = 4e-21
 Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 22/206 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            V+TG+T G+GKA A E    G  V++ SR+ E +     E+EE                
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYG------------- 50

Query: 96  LVHAKVAGIACDVC-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIE 153
            V  K   IA D        +++          I I +NN G +    +  L+   +E++
Sbjct: 51  -VETKT--IAADFSAGDDIYERIEKELEGL--DIGILVNNVGISHSIPEYFLETPEDELQ 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I++ N++ ++  TR  +  M  + KG  I N+  + +G   TPL A Y ++K  L    
Sbjct: 106 DIINVNVMATLKMTRLILPGMVKRKKGA-IVNI-SSFAGLIPTPLLATYSASKAFLDFFS 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L++E K   + V +  P +V T +
Sbjct: 164 RALYEEYKSQGIDVQSLLPYLVATKM 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 91.3 bits (227), Expect = 4e-21
 Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 23/209 (11%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 97
           ITG++RG G+A     L  GDRVV  +R +     T+ +L E   +              
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTA----TLADLAEKYGD-------------- 49

Query: 98  HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS 157
             ++  +A DV + A V      AV  FG +DI +NNAG    F  + + T  E    + 
Sbjct: 50  --RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQID 106

Query: 158 TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 217
           TN  G++  T+  +  +R+Q + GHI  +   G G S+ P++ +Y ++K  L  +  +L 
Sbjct: 107 TNFFGALWVTQAVLPYLREQ-RSGHIIQISSIG-GISAFPMSGIYHASKWALEGMSEALA 164

Query: 218 KESKRSKVGVHTASPGMVLTDLLLSGSTI 246
           +E     + V    PG   TD   + +  
Sbjct: 165 QEVAEFGIKVTLVEPGGYSTDWAGTSAKR 193

Length = 275

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 90.5 bits (225), Expect = 8e-21
 Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 17/154 (11%)

Query: 34  RNVVITGST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           + V++T +   G+G A AR  L  G RVV++      +  T  EL   L  G        
Sbjct: 18  KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLG-------- 69

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +V  + CDV   A V  L + AV   G +D+ +NNAG   G  P++  T++E 
Sbjct: 70  -------RVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLG-GQTPVVDMTDDEW 121

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
            +++   L G+   TR A+R MR +  GG I N 
Sbjct: 122 SRVLDVTLTGTFRATRAALRYMRARGHGGVIVNN 155

Length = 262

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.8 bits (223), Expect = 1e-20
 Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 24/212 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG TRG+G+A+A  FL  G +V V   S+E                      +  
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE----------------------NEA 45

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           K L    V  I CDV     V+K       EFG +D+ +NNAG      P  +F  E+  
Sbjct: 46  KELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYN 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL G+I  T E + +++   K G I N+      G++   T  Y  TK G+  L 
Sbjct: 105 KMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILT 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
             L  E  +  + V+  +PG V TD+ LSG +
Sbjct: 164 RRLAFELGKYGIRVNAVAPGWVETDMTLSGKS 195

Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 92.2 bits (229), Expect = 2e-20
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 31/240 (12%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           PR V ITG  RG+G+A+A  F  +GDR+++  R +E          + L E   A G   
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGA--------KKLAE---ALGD-- 315

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
            ++L       +  D+ + A V+         +G +D+ +NNAG  + FKP L+ + E+ 
Sbjct: 316 -EHLS------VQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDF 368

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            ++   NL G+  C R A R+M    +GG I N+ G+ +   + P    Y ++K  +  L
Sbjct: 369 TRVYDVNLSGAFACARAAARLMS---QGGVIVNL-GSIASLLALPPRNAYCASKAAVTML 424

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP-------ETVART 265
             SL  E   + + V+T +PG + T  +L+          +I   +P       E VA  
Sbjct: 425 SRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEA 484

Length = 520

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 88.5 bits (220), Expect = 2e-20
 Identities = 61/262 (23%), Positives = 103/262 (39%), Gaps = 41/262 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +++TG++RG+G+ALA E L  G    VV+ +RS E ++    EL   L+           
Sbjct: 2   IILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLR----------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V  +  D+ + A V++L        G  D+ INNAG+      +     +E++
Sbjct: 51  -------VTTVKADLSDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQ 103

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 211
           +    NL   +  T   +R  + +     + N+    SG +  P     +Y S+K     
Sbjct: 104 KYFDLNLTSPVCLTSTLLRAFKKRGLKKTVVNVS---SGAAVNPFKGWGLYCSSKAARDM 160

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
               L  E     V V + +PG+V TD            M   I E   +       R R
Sbjct: 161 FFRVLAAEEP--DVRVLSYAPGVVDTD------------MQREIRE--TSADPETRSRFR 204

Query: 272 VVKGSGKAINYLTPPRILLALV 293
            +K  G+ ++       L  L+
Sbjct: 205 SLKEKGELLDPEQSAEKLANLL 226

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 87.8 bits (218), Expect = 5e-20
 Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 28/205 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+  G+G+A+A  +L  G RVV+A       R+   E+                
Sbjct: 7   KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--------------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEE 151
                     ++ DV     + ++   AV  FG IDI  NNA     F   P+L  + + 
Sbjct: 52  -----PAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL---FDMAPILDISRDS 103

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLR 210
            +++ + N+ G     +   R M +Q +GG I NM   AG  G    L + Y +TK  + 
Sbjct: 104 YDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--ALVSHYCATKAAVI 161

Query: 211 QLQASLFKESKRSKVGVHTASPGMV 235
               S      R  + V+  +PG+V
Sbjct: 162 SYTQSAALALIRHGINVNAIAPGVV 186

Length = 257

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 1e-19
 Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 21/205 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG   G+G+A A  F   G +VVVA R +     TV  + E        AGG +    
Sbjct: 11  LVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE--------AGGEA---- 58

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                  +ACDV   A+V+ L    +  +G +D   NNAG       L + +  E + I+
Sbjct: 59  -----LFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIM 113

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
             N+ G  LC +  + +M  Q  GG I N    AG G    P  ++Y ++K  +  L  S
Sbjct: 114 GVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGLGA--APKMSIYAASKHAVIGLTKS 170

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
              E  +  + V+   P ++ TD+ 
Sbjct: 171 AAIEYAKKGIRVNAVCPAVIDTDMF 195

Length = 253

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 1e-19
 Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 24/204 (11%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+  G+G+A A      G  VVVA  ++E       ++        +A GG++    
Sbjct: 10  IVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQI--------VADGGTA---- 57

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQ 154
           +  +V     DV +P   + +++  V+ FG ID  +NNA    G K   L+    +  ++
Sbjct: 58  IAVQV-----DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKK 112

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            +S NL G+++CTR   + M  +  GG I N     +   S      YG  K GL  L  
Sbjct: 113 FMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQSSTAAWLYSNF----YGLAKVGLNGLTQ 167

Query: 215 SLFKESKRSKVGVHTASPGMVLTD 238
            L +E     + V+  +PG + T+
Sbjct: 168 QLARELGGMNIRVNAIAPGPIDTE 191

Length = 250

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 86.5 bits (214), Expect = 2e-19
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 22/202 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITGS RG+G+A A+ ++  G RV +A  + E+ R T  E+                
Sbjct: 4   KTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPA------------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     I+ DV + A + +     V+ +GSIDI +NNA       P++  T E  +
Sbjct: 51  -------ACAISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFD-LAPIVDITRESYD 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G++   +   R M  Q +GG I NM  + +G     L  VY +TK  +  L 
Sbjct: 103 RLFAINVSGTLFMMQAVARAMIAQGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLT 161

Query: 214 ASLFKESKRSKVGVHTASPGMV 235
            S      R  + V+  +PG+V
Sbjct: 162 QSAGLNLIRHGINVNAIAPGVV 183

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 2e-19
 Identities = 55/205 (26%), Positives = 92/205 (44%), Gaps = 20/205 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGS RGLG  +AR    +G  V+V  R++ ++   V  L         AAGG++ 
Sbjct: 12  QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALR--------AAGGAA- 62

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +A D+ +   V         E G +DI +NN G  +  +PL +  +  I 
Sbjct: 63  --------EALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGA-RDRRPLAELDDAAIR 113

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++ T+LV  IL +R A + M+ +   G I  +    +G  +    AVY + K GL  L 
Sbjct: 114 ALLETDLVAPILLSRLAAQRMK-RQGYGRIIAITSI-AGQVARAGDAVYPAAKQGLTGLM 171

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
            +L  E     +  +  +PG   T+
Sbjct: 172 RALAAEFGPHGITSNAIAPGYFATE 196

Length = 256

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 86.2 bits (214), Expect = 2e-19
 Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 20/205 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++T ++ G+G A+AR     G RV + +R+         E  E     + A G    
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNR--------ENLERAASELRAGGAG-- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V  +  D+ +P D+ +L   A + FG +DI +NNAG      P  + T+E+  
Sbjct: 52  -------VLAVVADLTDPEDIDRLVEKAGDAFGRVDILVNNAGGPPP-GPFAELTDEDWL 103

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +     L+  I   R  +  M+++   G I N+  + +     P   +    + GL  L 
Sbjct: 104 EAFDLKLLSVIRIVRAVLPGMKER-GWGRIVNI-SSLTVKEPEPNLVLSNVARAGLIGLV 161

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
            +L +E     V V++  PG + T+
Sbjct: 162 KTLSRELAPDGVTVNSVLPGYIDTE 186

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 86.0 bits (213), Expect = 3e-19
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG+++G+G A+AREFL  G  V++ +R ++++     EL E   E          
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPER--------- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V G+A DV +  D + + ++  + +  + I +NNAG N   K  + +T +E  
Sbjct: 61  ------EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR-KAAIDYTEDEWR 113

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I  TNL  +   +R A  +++ Q     I N+ G+ SG +     A YG TK  L Q+ 
Sbjct: 114 GIFETNLFSAFELSRYAHPLLK-QHASSAIVNI-GSVSGLTHVRSGAPYGMTKAALLQMT 171

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L  E     + V+  +P  + T L
Sbjct: 172 RNLAVEWAEDGIRVNAVAPWYIRTPL 197

Length = 257

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 85.7 bits (212), Expect = 3e-19
 Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 22/206 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG+T G+G A+AR     G RV V +R  E +  TV EL E    G         
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELRE---AG--------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +  G  CDV    +++ L   AV  +G ID+ +NNAG + G     +  +E   
Sbjct: 52  -----VEADGRTCDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGG-GATAELADELWL 105

Query: 154 QIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            +V TNL G    T+E ++   M ++   G I N+   G G       A Y ++K G+  
Sbjct: 106 DVVETNLTGVFRVTKEVLKAGGMLERGT-GRIINIASTG-GKQGVVHAAPYSASKHGVVG 163

Query: 212 LQASLFKESKRSKVGVHTASPGMVLT 237
              +L  E  R+ + V+   PG V T
Sbjct: 164 FTKALGLELARTGITVNAVCPGFVET 189

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 85.1 bits (211), Expect = 4e-19
 Identities = 69/268 (25%), Positives = 108/268 (40%), Gaps = 35/268 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG++ G+G+ALAREF  +G  V +A+R ++ +     EL                  
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLN------PNPS------ 48

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQ 154
                V     DV +    Q +      E G +D+ I NAG  KG     L F  +   +
Sbjct: 49  -----VEVEILDVTDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDLSF--KAFRE 101

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            + TNL+G+      A+   R +   GH+  +  + +     P  A Y ++K  L  L  
Sbjct: 102 TIDTNLLGAAAILEAALPQFRAK-GRGHLVLI-SSVAALRGLPGAAAYSASKAALSSLAE 159

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVK 274
           SL  + K+  + V   +PG + T L     T     M  ++    E  A+ +   I   K
Sbjct: 160 SLRYDVKKRGIRVTVINPGFIDTPL-----TANMFTMPFLMS--VEQAAKRIYKAI---K 209

Query: 275 GSGKAINY---LTPPRILLALVTAWLRR 299
                  +   L  P  LL L+   LRR
Sbjct: 210 KGAAEPTFPWRLAVPLRLLKLLPERLRR 237

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 85.3 bits (211), Expect = 5e-19
 Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 19/204 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           V+TG+  G+GK +A E   +G  V +A  + +       E+          AGG      
Sbjct: 11  VVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEIN--------KAGG------ 56

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K  G+A DV     V    +     FGS+DI ++NAG  +   P+  ++  + +++ 
Sbjct: 57  ---KAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGI-QIVNPIENYSFADWKKMQ 112

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + ++ G+ L T+ A++ M    +GG +  M G+     ++PL + Y + K GL  L   L
Sbjct: 113 AIHVDGAFLTTKAALKHMYKDDRGGVVIYM-GSVHSHEASPLKSAYVTAKHGLLGLARVL 171

Query: 217 FKESKRSKVGVHTASPGMVLTDLL 240
            KE  +  V  H   PG V T L+
Sbjct: 172 AKEGAKHNVRSHVVCPGFVRTPLV 195

Length = 262

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 87.7 bits (218), Expect = 7e-19
 Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 19/203 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG+  G+G+  A  F   G  VV +     +   T   +         AAG      
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIR--------AAGAV---- 365

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
             HA       DV +   ++  + +   E G  DI +NNAG        L  + E+ +++
Sbjct: 366 -AHAYR----VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMA-GGFLDTSAEDWDRV 419

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G I   R   R M ++  GGHI N+  A +   S  L A Y ++K  +  L   
Sbjct: 420 LDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPA-YATSKAAVLMLSEC 478

Query: 216 LFKESKRSKVGVHTASPGMVLTD 238
           L  E   + +GV    PG V T+
Sbjct: 479 LRAELAAAGIGVTAICPGFVDTN 501

Length = 582

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 84.0 bits (208), Expect = 1e-18
 Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 21/209 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G A+AR     G  V V    S +         + L   + AAGG      
Sbjct: 9   IVTGASRGIGAAIARRLAADGFAVAVNYAGSAAA-------ADELVAEIEAAGG------ 55

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +   +  DV + A V +L + A   FG ID+ +NNAG       +  F  E+ ++ +
Sbjct: 56  ---RAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGV-MPLGTIADFDLEDFDRTI 111

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           +TNL G+ +  REA R +     GG I N+          P    Y ++K  +  L   L
Sbjct: 112 ATNLRGAFVVLREAARHLGQ---GGRIINLS-TSVIALPLPGYGPYAASKAAVEGLVHVL 167

Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGST 245
             E +   + V+  +PG V T+L  +G +
Sbjct: 168 ANELRGRGITVNAVAPGPVATELFFNGKS 196

Length = 245

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 83.9 bits (208), Expect = 1e-18
 Identities = 41/146 (28%), Positives = 55/146 (37%), Gaps = 17/146 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            V+ G  + LG  L       G RV VA  +SE       E+     EG           
Sbjct: 5   AVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG----------- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                  G   D      V  LS      FG +D+ + NAG  K    +  F   + ++ 
Sbjct: 54  ----MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA-AFITDFQLGDFDRS 108

Query: 156 VSTNLVGSILCTREAMRVM-RDQPKG 180
           +  NLVG  LC RE  R+M RD  +G
Sbjct: 109 LQVNLVGYFLCAREFSRLMIRDGIQG 134

Length = 259

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 64/240 (26%), Positives = 95/240 (39%), Gaps = 26/240 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG   G+G A A+  L  G +V +  R +E+      EL+    +          
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDR-NENPGAA-AELQAINPKV--------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-- 151
                 K   + CDV     +      A+ +FG +DI INNAG     K  L        
Sbjct: 50  ------KATFVQCDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDE-KSYLFAGKLPPP 102

Query: 152 IEQIVSTNLVGSILCTREAMRVMR--DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
            E+ +  NL G I  T  A+  M      KGG I N+     G    P   VY ++K G+
Sbjct: 103 WEKTIDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGSVA-GLYPAPQFPVYSASKHGV 161

Query: 210 RQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPETVARTLV 267
                SL    + ++ V V+   PG   T  LL     +  +M      + PE VA+ +V
Sbjct: 162 VGFTRSLADLLEYKTGVRVNAICPGFTNTP-LLPDLVAKEAEMLPSAPTQSPEVVAKAIV 220

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 82.6 bits (204), Expect = 3e-18
 Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 21/211 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++ G+G A+AR  +  G +VV  +R  + +     E +         AG  + 
Sbjct: 7   RVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQS--------AGYPT- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +    CD+     +  + +    +   +D+ INNAG  +  +PLL    E  +
Sbjct: 58  -------LFPYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARP-EPLLSGKTEGWK 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQ 211
           ++   N++   +CTREA + M+++    GHI N++  +G       +   Y +TK  +  
Sbjct: 110 EMFDVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTA 169

Query: 212 LQASLFKE--SKRSKVGVHTASPGMVLTDLL 240
           L   L +E    ++ +   + SPG+V T+  
Sbjct: 170 LTEGLRQELREAKTHIRATSISPGLVETEFA 200

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 80.3 bits (199), Expect = 4e-18
 Identities = 48/178 (26%), Positives = 70/178 (39%), Gaps = 23/178 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           V+ITG T GLG ALAR     G R +V  SR               L   + A G     
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGP------APGAAELVAELEALG----- 51

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
               A+V   ACDV +   +  L        G +D  ++NAG      PL + T E  E+
Sbjct: 52  ----AEVTVAACDVADRDALAALLAALPAALGPLDGVVHNAGVLD-DGPLEELTPERFER 106

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +++  + G+         + RD   G   F +  + +G   +P  A Y +    L  L
Sbjct: 107 VLAPKVTGAWNLH----ELTRDLDLG--AFVLFSSVAGVLGSPGQANYAAANAALDAL 158

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 82.1 bits (203), Expect = 5e-18
 Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 25/211 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG   G+G A+A+     G  VVVA    E     V E  +                
Sbjct: 4   ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAE-KVAEAAQG--------------- 47

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +  G+ CDV   A VQ     AV EFG +DI ++NAG      P+ + + E+  + 
Sbjct: 48  --GPRALGVQCDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATS-SPIAETSLEDWNRS 104

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G  L +REA R+M+ Q  GG+I   + + +  +  P  A Y + K     L   
Sbjct: 105 MDINLTGHFLVSREAFRIMKSQGIGGNIV-FNASKNAVAPGPNAAAYSAAKAAEAHLARC 163

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTI 246
           L  E     + V+T +P     D +  GS I
Sbjct: 164 LALEGGEDGIRVNTVNP-----DAVFRGSKI 189

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 82.2 bits (203), Expect = 6e-18
 Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 24/199 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG+ +G+G+ +A      G RV++  RS         EL   +   ++AAG      
Sbjct: 7   VVVTGAAQGIGRGVAERLAGEGARVLLVDRS---------ELVHEVLAEILAAGD----- 52

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      D+   A  Q +   AV  FG +D+ INN G     KP   +  E+IE  
Sbjct: 53  ----AAHVHTADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAE 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQA 214
           +  +L  ++ C R  +  M ++ + G I N+   A  G    P    Y + K G+  L A
Sbjct: 109 IRRSLFPTLWCCRAVLPHMLER-QQGVIVNVSSIATRGIYRIP----YSAAKGGVNALTA 163

Query: 215 SLFKESKRSKVGVHTASPG 233
           SL  E  R  + V+  +PG
Sbjct: 164 SLAFEHARDGIRVNAVAPG 182

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 82.1 bits (203), Expect = 7e-18
 Identities = 59/221 (26%), Positives = 89/221 (40%), Gaps = 36/221 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITG T  LG A+AR    +G +V    R+ E       E+         A GG + 
Sbjct: 6   KVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEIT--------ALGGRAI 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-------------G 140
                     +A DV + A +++     V +FG++DI IN AG N               
Sbjct: 58  ---------ALAADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPET 108

Query: 141 FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT- 199
            +       E  E +   NL GS L ++   + M +Q KGG I N+    S  + +PLT 
Sbjct: 109 EQNFFDLDEEGWEFVFDLNLNGSFLPSQVFGKDMLEQ-KGGSIINI---SSMNAFSPLTK 164

Query: 200 -AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
              Y + K  +      L  E   + V V+  +PG  +T  
Sbjct: 165 VPAYSAAKAAVSNFTQWLAVEFATTGVRVNAIAPGFFVTPQ 205

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 33/243 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG++ G+G+ALA     +G R+++  R++E +      L               +
Sbjct: 6   KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP-----------YPGR 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              V A       D+   A  + +   A  E G I++ INNAG N  F  L     E IE
Sbjct: 55  HRWVVA-------DLTSEAGREAVLARA-REMGGINVLINNAGVNH-FALLEDQDPEAIE 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
           ++++ NL   +  TR  + ++R QP       G  F     GS G   P  A Y ++K  
Sbjct: 106 RLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTF-----GSIG--YPGYASYCASKFA 158

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 268
           LR    +L +E   + V V   +P    T +        N+ + N + + PE VA  ++ 
Sbjct: 159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRALGNAMDD-PEDVAAAVLQ 217

Query: 269 RIR 271
            I 
Sbjct: 218 AIE 220

Length = 263

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 81.2 bits (201), Expect = 1e-17
 Identities = 50/217 (23%), Positives = 93/217 (42%), Gaps = 34/217 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + ++ITG+   +GKA  +  L +G R+++A  ++ ++     EL                
Sbjct: 3   KIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELT--------------- 47

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKG-FKPLLQFTNEE 151
            NL   +V  +  D+     +++L    + +FG IDI INNA  + K       +F  E+
Sbjct: 48  -NLYKNRVIALELDITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQ 106

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS------------GGSSTPLT 199
             ++++ NL G+ LC++  +++ + Q   G I N+    S              +     
Sbjct: 107 WNEVLNVNLGGAFLCSQAFIKLFKKQ-GKGSIINI---ASIYGVIAPDFRIYENTQMYSP 162

Query: 200 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 236
             Y   K G+  L   L K    + + V+  SPG +L
Sbjct: 163 VEYSVIKAGIIHLTKYLAKYYADTGIRVNAISPGGIL 199

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 81.4 bits (201), Expect = 1e-17
 Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 23/213 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG +RG+G+ + R F+ +G +VV  +R   + +   +EL         A  GS K  
Sbjct: 12  VIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNR-------AGPGSCKF- 63

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   + CDV +  D++ L +  V  FG ID  +NNAG +   +   + + +E   +
Sbjct: 64  --------VPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDL 115

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++ NL+   L ++ A+  +R     G+I N+    GS G      A Y +TK  +  +  
Sbjct: 116 LNLNLISYFLASKYALPHLRKSQ--GNIINLSSLVGSIGQKQ--AAPYVATKGAITAMTK 171

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL--LSGST 245
           +L  +  R  V V+  SPG + T L   L+  T
Sbjct: 172 ALAVDESRYGVRVNCISPGNIWTPLWEELAAQT 204

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 81.1 bits (201), Expect = 1e-17
 Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 21/205 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG++ G+G+ LA      G R+V+++R  E        LEE +K        S    
Sbjct: 6   VIITGASSGIGEELAYHLARLGARLVLSARREE-------RLEE-VK--------SECLE 49

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI-EQ 154
           L       +  D+ +  D +++   A+  FG +DI INNAG     + L   T+ ++  +
Sbjct: 50  LGAPSPHVVPLDMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRK 107

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           I+  N  G +  T+ A+  + ++   G I  +    +G    P    Y ++K  L+    
Sbjct: 108 IMEVNYFGPVALTKAALPHLIER-SQGSIVVVSSI-AGKIGVPFRTAYAASKHALQGFFD 165

Query: 215 SLFKESKRSKVGVHTASPGMVLTDL 239
           SL  E     + V    PG++ T++
Sbjct: 166 SLRAELSEPNISVTVVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 56/204 (27%), Positives = 83/204 (40%), Gaps = 25/204 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG  RGLG A AR  +  G +VV++    E  +    EL +                
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGD-------------AAR 54

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
             H        DV +      + + A   FG +D+ +NNAG   G   +   T EE  ++
Sbjct: 55  FFHL-------DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTG-GTVETTTLEEWRRL 106

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G  L TR  +  M++   GG I NM     G    P  A Y ++K  +R L  S
Sbjct: 107 LDINLTGVFLGTRAVIPPMKEA-GGGSIINMSSI-EGLVGDPALAAYNASKGAVRGLTKS 164

Query: 216 LFKESKRSKVG--VHTASPGMVLT 237
              E      G  V++  PG + T
Sbjct: 165 AALECATQGYGIRVNSVHPGYIYT 188

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 80.9 bits (200), Expect = 2e-17
 Identities = 49/206 (23%), Positives = 85/206 (41%), Gaps = 23/206 (11%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            +   ITG++ G G+ +    L  GDRV    R  +++        + L           
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVL-------- 53

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                         DV + A V+ + + A    G ID+ ++NAG    F    + ++ +I
Sbjct: 54  ------------QLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGL-FGAAEELSDAQI 100

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            + + TNL+GSI   R A+  +R Q  GG I  +   G G  + P  ++Y +TK G+   
Sbjct: 101 RRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSEG-GQIAYPGFSLYHATKWGIEGF 158

Query: 213 QASLFKESKRSKVGVHTASPGMVLTD 238
             ++ +E     +      PG   T+
Sbjct: 159 VEAVAQEVAPFGIEFTIVEPGPARTN 184

Length = 276

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 80.4 bits (199), Expect = 2e-17
 Identities = 68/267 (25%), Positives = 104/267 (38%), Gaps = 35/267 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG   G+G+ LA EF   G +VV+   + +    T   + +   +            
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGK------------ 49

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
            VH       CDV +  +V + +     E G + I INNAG   G K LL+  +EEIE+ 
Sbjct: 50  -VHYYK----CDVSKREEVYEAAKKIKKEVGDVTILINNAGVVSG-KKLLELPDEEIEKT 103

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQA 214
              N +     T+  +  M ++   GHI  +  A   G  S    A Y ++K        
Sbjct: 104 FEVNTLAHFWTTKAFLPDMLERNH-GHIVTI--ASVAGLISPAGLADYCASKAAAVGFHE 160

Query: 215 SLFKESKRSKV-GVHTA--SPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
           SL  E K     G+ T    P  + T  +  G       +  I+   PE VA  +V  I 
Sbjct: 161 SLRLELKAYGKPGIKTTLVCPYFINTG-MFQGVKTPRPLLAPIL--EPEYVAEKIVRAIL 217

Query: 272 VVKGSGKAINYLTPPRILLALVTAWLR 298
               + + + YL  P      +    R
Sbjct: 218 ----TNQQMLYL--PFY-AYFLPILKR 237

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 21/195 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
             + G+  GLG A+AR F   G  V +A+R          +LE  L + +  AGGS+K  
Sbjct: 2   AAVVGAGDGLGAAIARRFAAEGFSVALAARREA-------KLEALLVDIIRDAGGSAK-- 52

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  D  +  +V  L +    E G +++ + NAG N  F P+L+ T    E++
Sbjct: 53  -------AVPTDARDEDEVIALFDLIEEEIGPLEVLVYNAGANVWF-PILETTPRVFEKV 104

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
                 G  L  REA + M  + +G  IF   GA +        A +   K  LR L  S
Sbjct: 105 WEMAAFGGFLAAREAAKRMLARGRGTIIFT--GATASLRGRAGFAAFAGAKFALRALAQS 162

Query: 216 LFKESKRSKVGVHTA 230
           + +E      G+H A
Sbjct: 163 MARE--LGPKGIHVA 175

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 80.2 bits (198), Expect = 3e-17
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 25/210 (11%)

Query: 37  VITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++TG++RG+G+A+A E    G D  +      +     V E+         AAG      
Sbjct: 5   IVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVL--------AAGR----- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 154
               +      D+ E +D + L + A  +FG +D  +NNAG   +    LL  T +  ++
Sbjct: 52  ----RAIYFQADIGELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDR 107

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           +++ NL G    T+   R M +QP         I  +    +   S P    Y  +K GL
Sbjct: 108 LIAINLRGPFFLTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVS-PNRGEYCISKAGL 166

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
                 L        + VH   PG++ TD+
Sbjct: 167 SMATRLLAYRLADEGIAVHEIRPGLIHTDM 196

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.0 bits (198), Expect = 3e-17
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 47/222 (21%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           +VITG  +GLG+A+A      G ++ +   + E +   V E          A G      
Sbjct: 8   IVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECG--------ALGT----- 54

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---------------TNKG 140
               +V G A +V +  DV+        +FG ++  INNAG               T+K 
Sbjct: 55  ----EVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSK- 109

Query: 141 FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG---AGSGGSSTP 197
              L QF     + ++  NL G  LC REA   M +    G I N+     AG+ G +  
Sbjct: 110 -MSLEQF-----QSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN- 162

Query: 198 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
               Y ++K G+  +  +  KE  R  + V   +PG++ T++
Sbjct: 163 ----YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200

Length = 253

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 79.0 bits (195), Expect = 8e-17
 Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 19/203 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG  +G+GK +A      G  V VA  + E+ + T  E+ +        AGG      
Sbjct: 4   LVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ--------AGG------ 49

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
             A    +  DV +   V    + A  +FG  D+ +NNAG      P+L+ T EE++++ 
Sbjct: 50  -KAVAYKL--DVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVY 105

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + N+ G +   + A R  + Q  GG I N   + +G    P+ + Y STK  +R L  + 
Sbjct: 106 NVNVKGVLFGIQAAARQFKKQGHGGKIINA-ASIAGHEGNPILSAYSSTKFAVRGLTQTA 164

Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
            +E     + V+   PG+V T +
Sbjct: 165 AQELAPKGITVNAYCPGIVKTPM 187

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 78.8 bits (194), Expect = 8e-17
 Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 21/212 (9%)

Query: 35  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
             ++TG   G+GKA+A     +G  VV+A   SE        +++         GG    
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--------GG---- 48

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIE 153
                +  G+ C+V    D++ +    V++FG I I +NNAG   G KP  +  T E+ E
Sbjct: 49  -----QAIGLECNVTSEQDLEAVVKATVSQFGGITILVNNAGGG-GPKPFDMPMTEEDFE 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
                NL  +   ++     M+ +  GG I N+  + S  +     A YGS+K  +  + 
Sbjct: 103 WAFKLNLFSAFRLSQLCAPHMQ-KAGGGAILNI-SSMSSENKNVRIAAYGSSKAAVNHMT 160

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
            +L  +     + V+  +PG V TD L S  T
Sbjct: 161 RNLAFDLGPKGIRVNAVAPGAVKTDALASVLT 192

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 9e-17
 Identities = 56/208 (26%), Positives = 85/208 (40%), Gaps = 27/208 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TG   G+G A+A  F   G RV +  RS +   +    L  N K           
Sbjct: 16  KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAK----------- 64

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                    G+ CDV +   V+      ++ FG IDI +N+AG      P    + E+ +
Sbjct: 65  ---------GLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWD 114

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 211
           + +  NL GS L  +   R M     GG I N+    S      L     Y ++K G+  
Sbjct: 115 KTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNL---ASQAGVVALERHVAYCASKAGVVG 170

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           +   L  E     + V+  SP +VLT+L
Sbjct: 171 MTKVLALEWGPYGITVNAISPTVVLTEL 198

Length = 255

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 77.7 bits (192), Expect = 1e-16
 Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 28/209 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V+ITG T G+G ALAR+FL +G+ V++  R            EE L E       +  
Sbjct: 6   NTVLITGGTSGIGLALARKFLEAGNTVIITGRR-----------EERLAE-AKKELPN-- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEI 152
              +H  V     DV +   V+ L+   ++E+ ++DI INNAG  +           ++ 
Sbjct: 52  ---IHTIV----LDVGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKA 104

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLR 210
           +  + TNL+G I   +  +  ++ QP+   I N+    SG +  P+ A  VY +TK  L 
Sbjct: 105 DTEIDTNLIGPIRLIKAFLPHLKKQPEAT-IVNV---SSGLAFVPMAANPVYCATKAALH 160

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
               +L  + K + V V    P  V T+L
Sbjct: 161 SYTLALRHQLKDTGVEVVEIVPPAVDTEL 189

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 80.7 bits (200), Expect = 2e-16
 Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 39/223 (17%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+  G+GKA A+     G  VV+A    E+      EL                  
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG---------------- 468

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +  G+ACDV + A VQ     A   FG +DI ++NAG      P+ + ++E+  + 
Sbjct: 469 --PDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG-IAISGPIEETSDEDWRRS 525

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHI-FNMD------GAGSGGSSTPLTAVYGSTKCG 208
              N  G  L  REA+R+M+ Q  GG I F         G   G         YG+ K  
Sbjct: 526 FDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGA--------YGAAKAA 577

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 251
              L   L  E     + V+      V  D ++ GS I   + 
Sbjct: 578 ELHLVRQLALELGPDGIRVN-----GVNPDAVVRGSGIWTGEW 615

Length = 681

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 78.1 bits (193), Expect = 2e-16
 Identities = 58/212 (27%), Positives = 88/212 (41%), Gaps = 36/212 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG++ G+G+ALA     +G ++V+A+R+   +     EL +                
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD---------------- 47

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--KGFKPLLQFTNEEIE 153
               +   +  DV +    ++L   AV  FG IDI +NNAG      F  L        E
Sbjct: 48  -HGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFE 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAV-----YGSTKC 207
           +++  N +G++ CT  A+      P   H+    G     SS   LT V     Y ++K 
Sbjct: 105 RVMRVNYLGAVYCTHAAL------P---HLKASRGQIVVVSSLAGLTGVPTRSGYAASKH 155

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
            L     SL  E     V V    PG V TD+
Sbjct: 156 ALHGFFDSLRIELADDGVAVTVVCPGFVATDI 187

Length = 263

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 77.6 bits (191), Expect = 2e-16
 Identities = 56/203 (27%), Positives = 87/203 (42%), Gaps = 20/203 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++ G+G+A AR     G  V +A+R  + +     ELE        A GG      
Sbjct: 7   LVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELE--------AEGG------ 52

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
             A V  +  DV +   V       V   G +DI +NNAG      P+      +  +++
Sbjct: 53  -KALV--LELDVTDEQQVDAAVERTVEALGRLDILVNNAGIML-LGPVEDADTTDWTRMI 108

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL+G +  T  A+     +   G I N+    +G  +   +AVY +TK G+      L
Sbjct: 109 DTNLLGLMYTTHAALPHHLLR-NKGTIVNISSV-AGRVAVRNSAVYNATKFGVNAFSEGL 166

Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
            +E     V V    PG V T+L
Sbjct: 167 RQEVTERGVRVVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 76.7 bits (189), Expect = 4e-16
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE-LE---ENLKEGMMAAGGS 91
             +TG++RG+G+A+A     +G  VVVA++++        + L    E   E + AAGG 
Sbjct: 6   AFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG- 64

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                   +   I  DV +   V+ L    V++FG +DI +NNAG       +     + 
Sbjct: 65  --------QALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIW-LSLVEDTPAKR 115

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGL 209
            + +   NL G+ L ++ A+  M    + GHI N+       S  P      Y + K G+
Sbjct: 116 FDLMQRVNLRGTYLLSQAALPHMVKAGQ-GHILNI---SPPLSLRPARGDVAYAAGKAGM 171

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLT 237
            +L   L  E +R  + V++  P   + 
Sbjct: 172 SRLTLGLAAELRRHGIAVNSLWPSTAIE 199

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 76.7 bits (189), Expect = 4e-16
 Identities = 60/214 (28%), Positives = 96/214 (44%), Gaps = 19/214 (8%)

Query: 33  PRNV-VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
            R V +ITG++RG+G A A      G  V +    +        +  E + + +   GG 
Sbjct: 1   MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNR-------DAAEAVVQAIRRQGGE 53

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
           +           +A DV + ADV +L      E G +D  +NNAG  +    L Q     
Sbjct: 54  A---------LAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAAR 104

Query: 152 IEQIVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           + +I +TN+VGS LC REA++ M  R   +GG I N+    +   S      Y ++K  +
Sbjct: 105 LTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAI 164

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
             +   L KE     + V+   PG++ T++  SG
Sbjct: 165 DTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG 198

Length = 248

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 5e-16
 Identities = 80/299 (26%), Positives = 111/299 (37%), Gaps = 48/299 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V ITG  RG+G A AR     G RV +        + T  EL                
Sbjct: 6   KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---------------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-- 151
                  V G   DV +PA      +    + G ID+ +NNAG      P+  F +E   
Sbjct: 50  -----GLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGV----MPVGPFLDEPDA 100

Query: 152 -IEQIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
              +I+  N+ G IL ++ A   M   P+G GH+ N+    +G    P  A Y ++K  +
Sbjct: 101 VTRRILDVNVYGVILGSKLAAPRMV--PRGRGHVVNVASL-AGKIPVPGMATYCASKHAV 157

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-- 267
                +   E + + V V    P  V T+  L   T   K   N   E PE VA  +V  
Sbjct: 158 VGFTDAARLELRGTGVHVSVVLPSFVNTE--LIAGTGGAKGFKN--VE-PEDVAAAIVGT 212

Query: 268 -----PRIRVVK--GSGKAINYLTPPRILLALVTAWL--RRGRWFDDQGRALYAAEADR 317
                P +RV +  G       L P R+  AL       R     D   RA Y   A  
Sbjct: 213 VAKPRPEVRVPRALGPLAQAQRLLPRRVREALNRLLGGDRVFLDVDTAARAAYERRARG 271

Length = 273

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 76.6 bits (189), Expect = 5e-16
 Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 20/207 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+G A+AR F   G  V +A   +         +  +       AG    
Sbjct: 8   KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD------VAG---- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+V  +  DV + A V      A   FG +D+ +NNAG N  F   L  T+E+  
Sbjct: 58  -----ARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWR 111

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQL 212
           +  + +L G+    R  +  M ++   G I N+  A +      P    Y   K GL  L
Sbjct: 112 RCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNI--ASTHAFKIIPGCFPYPVAKHGLLGL 168

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L  E     V V+  +PG + T L
Sbjct: 169 TRALGIEYAARNVRVNAIAPGYIETQL 195

Length = 260

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 76.1 bits (188), Expect = 8e-16
 Identities = 60/224 (26%), Positives = 90/224 (40%), Gaps = 44/224 (19%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VVITG+  G+GK  ARE    G  V++A R+ E       E+++                
Sbjct: 4   VVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETG------------- 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
             +AKV  I  D+   A V++ +   +  F  +DI INNAG      P  + T +  E  
Sbjct: 51  --NAKVEVIQLDLSSLASVRQFAEEFLARFPRLDILINNAGI---MAPPRRLTKDGFELQ 105

Query: 156 VSTNLVGSILCTREAMRVMRDQP------------KGGHI-FNMDGAGSGGSSTPLTAVY 202
            + N +G  L T   + V++               + G I FN     +    +P    Y
Sbjct: 106 FAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSP-YKAY 164

Query: 203 GSTK--CGL--RQLQASLFKESKRSKVGVHTAS--PGMVLTDLL 240
           G +K    L  R+L   L         GV   +  PG+V T+LL
Sbjct: 165 GQSKLANILFTRELARRL------EGTGVTVNALHPGVVRTELL 202

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 77.1 bits (190), Expect = 1e-15
 Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 52/291 (17%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
              VVITG++ G+G+A A  F   G R+V+A+R  E+++    E                
Sbjct: 7   GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA------------- 53

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK----PLLQFT 148
               + A+V  +  DV +   V+ L+  A +  G ID+W+NN G     +    P+    
Sbjct: 54  ----LGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPI---- 105

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            E  EQ++ TNL+G +     A+ + + Q  G  I NM   G G ++ P  A Y ++K G
Sbjct: 106 -EAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFI-NMISLG-GFAAQPYAAAYSASKFG 162

Query: 209 LRQLQASLFKE-SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ------MFNIICELPET 261
           LR    +L  E +    + V    P  + T     G+    ++      +++     P  
Sbjct: 163 LRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYD-----PRR 217

Query: 262 VARTLV-----PRIRVVKGSGKAI----NYLTP---PRILLALVTAWLRRG 300
           VA+ +V     PR     G+   +    ++L P    R++  L   +L R 
Sbjct: 218 VAKAVVRLADRPRATTTVGAAARLARLAHFLAPGLTARLMGRLTRRYLARA 268

Length = 330

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 1e-15
 Identities = 50/207 (24%), Positives = 76/207 (36%), Gaps = 38/207 (18%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           +++TG + G+G A+ +E L +G  VV A                      +  G    +N
Sbjct: 12  IIVTGGSSGIGLAIVKELLANGANVVNAD---------------------IHGGDGQHEN 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--------KGFKPLLQF 147
                      DV    +V       + +FG ID  +NNAG N        K      + 
Sbjct: 51  YQFVP-----TDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYEL 105

Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTK 206
                +++ + N  G  L ++   R M  Q   G I NM   AG  GS     + Y +TK
Sbjct: 106 NEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAGLEGSEG--QSCYAATK 162

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPG 233
             L     S  KE  +  + V   +PG
Sbjct: 163 AALNSFTRSWAKELGKHNIRVVGVAPG 189

Length = 266

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 75.0 bits (185), Expect = 1e-15
 Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 43/258 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           V+ITG++RG+G  L R+ L  G+  V+A+ R   +     TEL         AA G+S  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSA----ATEL---------AALGASHS 47

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS------IDIWINNAGTNKGFKPLLQFT 148
            L                DV      +            +D+ INNAG    + P  +  
Sbjct: 48  RL-----------HILELDVTDEIAESAEAVAERLGDAGLDVLINNAGILHSYGPASEVD 96

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAV-YGSTK 206
           +E++ ++   N++G +L T+  + ++  +     I N+    GS G +T      Y ++K
Sbjct: 97  SEDLLEVFQVNVLGPLLLTQAFLPLLL-KGARAKIINISSRVGSIGDNTSGGWYSYRASK 155

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 266
             L  L  SL  E KR  + V +  PG V TD  + G   +NK         PE     L
Sbjct: 156 AALNMLTKSLAVELKRDGITVVSLHPGWVRTD--MGGPFAKNKGPIT-----PEESVAGL 208

Query: 267 VPRIRVVK--GSGKAINY 282
           +  I  +    SGK ++Y
Sbjct: 209 LKVIDNLNEEDSGKFLDY 226

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 2e-15
 Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           V+ITG++RG+G+A A      G  V +  +R + +   T   +         AAGG    
Sbjct: 5   VLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVR--------AAGG---- 52

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
               A V  +A DV   ADV  + +   + FG +D  +NNAG      PL       + +
Sbjct: 53  ---RACV--VAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRR 107

Query: 155 IVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +  TN++G+ LC REA R +      +GG I N+    S   S      Y  +K  +  L
Sbjct: 108 MFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTL 167

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
              L KE     V V+   PG++ T++  SG
Sbjct: 168 TLGLAKELGPHGVRVNAVRPGLIETEIHASG 198

Length = 248

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 74.7 bits (184), Expect = 2e-15
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 21/217 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G+A+A+     G  V+V+SR  +  +             ++AAGG ++   
Sbjct: 12  LVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADA--------IVAAGGKAE--- 60

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                  +AC + E   +  L        G +DI +NNA  N  F  +L       ++ V
Sbjct: 61  ------ALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTV 114

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+ G    + EA ++M++Q  GG I N+  + +G S      +Y  TK  +  +  + 
Sbjct: 115 DVNIRGYFFMSVEAGKLMKEQ-GGGSIVNV-ASVNGVSPGDFQGIYSITKAAVISMTKAF 172

Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 253
            KE     + V+   PG  LTD   + +  +N  +  
Sbjct: 173 AKECAPFGIRVNALLPG--LTDTKFASALFKNDAILK 207

Length = 252

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 73.6 bits (181), Expect = 4e-15
 Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 23/234 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + + ITG+  G+G+  A  F  +G  V +               E+ L       G    
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDID-----------EDGLAALAAELGA--- 46

Query: 94  KNLVHAKVAGIACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
           +N+V   +     DV + A     L++FA    G +D   NNAG  +G  P         
Sbjct: 47  ENVVAGAL-----DVTDRAAWAAALADFAAATGGRLDALFNNAGVGRG-GPFEDVPLAAH 100

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +++V  N+ G +     A+  ++  P G  + N   + S     P  AVY +TK  +R L
Sbjct: 101 DRMVDINVKGVLNGAYAALPYLKATP-GARVINTASS-SAIYGQPDLAVYSATKFAVRGL 158

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL 266
             +L  E  R  + V    P  V T +L  G T    +           VA+ +
Sbjct: 159 TEALDVEWARHGIRVADVWPWFVDTPILTKGETGAAPKKGLGRVLPVSDVAKVV 212

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 4e-15
 Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 34/211 (16%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG++ G+G+A A+ F   G +VVV +R          EL++ L   + A GG      
Sbjct: 10  IITGASSGIGRAAAKLFAREGAKVVVGARRQA-------ELDQ-LVAEIRAEGG------ 55

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +   +A DV + A  + L   AV  FG +DI  NNAGT     P+ + + E   + +
Sbjct: 56  ---EAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETL 112

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--------PLTAVYGSTKCG 208
           +TNL  + L  +  +  M  +  G  IF         +ST        P  A Y ++K G
Sbjct: 113 ATNLTSAFLGAKHQIPAMLARGGGSLIF---------TSTFVGHTAGFPGMAAYAASKAG 163

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           L  L   L  E     + V+   PG   T +
Sbjct: 164 LIGLTQVLAAEYGAQGIRVNALLPGGTDTPM 194

Length = 254

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 73.6 bits (181), Expect = 5e-15
 Identities = 55/222 (24%), Positives = 95/222 (42%), Gaps = 29/222 (13%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+  G G+ +AR F   G RVV+A  +++       ++ E                 
Sbjct: 9   IVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEA---------------- 52

Query: 97  VHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                  IA   DV + ADV+ +   A+++FG +DI +NNAG     KP+L+   EE ++
Sbjct: 53  ------AIAIQADVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDR 106

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           + + N+    L  +  +  M +Q  GG I N+     G    P    Y ++K  +     
Sbjct: 107 VFAVNVKSIYLSAQALVPHMEEQ-GGGVIINIASTA-GLRPRPGLTWYNASKGWVVTATK 164

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFN 253
           ++  E     + V+   P    T LL   +   T +N+  F 
Sbjct: 165 AMAVELAPRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFR 206

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 73.6 bits (181), Expect = 5e-15
 Identities = 47/207 (22%), Positives = 82/207 (39%), Gaps = 19/207 (9%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            +  ++TG+ RG+G A+ARE L  G RV+    S         +  E             
Sbjct: 2   KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND---CAKDWFE------------- 45

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
           +      +V     DV +  +  +       E G +DI +NNAG  +      + +++E 
Sbjct: 46  EYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRD-SVFKRMSHQEW 104

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
             +++TNL      T+     M +Q   G I N+    +G         Y + K G+   
Sbjct: 105 NDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV-NGLKGQFGQTNYSAAKAGMIGF 162

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L  E  R  + V+  +PG + T +
Sbjct: 163 TKALASEGARYGITVNCIAPGYIATPM 189

Length = 245

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 72.8 bits (179), Expect = 8e-15
 Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 15/207 (7%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V+ITG + GLG+A+A      G  V+V         M      + +  G+ AAGG   
Sbjct: 7   RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHP----MRGRAEADAVAAGIEAAGG--- 59

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K  G+A DV + A  +   +  V EFG +DI +NNAG         + + EE +
Sbjct: 60  ------KALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATD-AAFAELSIEEWD 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  NL G    T+ A+  M    +GG I N+  + +G         Y ++K GL  L 
Sbjct: 113 DVIDVNLDGFFNVTQAALPPMIRARRGGRIVNI-ASVAGVRGNRGQVNYAASKAGLIGLT 171

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  E     + V+  +PG + T + 
Sbjct: 172 KTLANELAPRGITVNAVAPGAINTPMA 198

Length = 249

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 73.1 bits (180), Expect = 1e-14
 Identities = 59/199 (29%), Positives = 88/199 (44%), Gaps = 24/199 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG+ +G+G+ +A      G RVV+  RS         EL   +   + AAGG     
Sbjct: 11  VVVTGAAQGIGRGVALRAAAEGARVVLVDRS---------ELVHEVAAELRAAGG----- 56

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  D+   A  Q     AV  FG ID+ INN G     KP  ++  E+IE  
Sbjct: 57  ----EALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAE 112

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQA 214
           +  +L  ++ C R  +  M  Q  GG I N+    + G +  P    Y + K G+  L A
Sbjct: 113 IRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGINRVP----YSAAKGGVNALTA 167

Query: 215 SLFKESKRSKVGVHTASPG 233
           SL  E     + V+  +PG
Sbjct: 168 SLAFEYAEHGIRVNAVAPG 186

Length = 260

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 73.0 bits (179), Expect = 1e-14
 Identities = 56/203 (27%), Positives = 90/203 (44%), Gaps = 23/203 (11%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++T ST G+G A+AR     G  VVV+SR  ++V   V  L+    EG+           
Sbjct: 14  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQ---GEGL----------- 59

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
               V G  C V +  D ++L   AVN  G +DI ++NA  N  F  +L  T E  ++I+
Sbjct: 60  ---SVTGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKIL 116

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV--YGSTKCGLRQLQA 214
             N+  + L T+  +  M  +  G  +       S  +  P   +  Y  +K  L  L  
Sbjct: 117 DVNVKATALMTKAVVPEMEKRGGGSVVI----VSSVAAFHPFPGLGPYNVSKTALLGLTK 172

Query: 215 SLFKESKRSKVGVHTASPGMVLT 237
           +L  E     + V+  +PG++ T
Sbjct: 173 NLAPELAPRNIRVNCLAPGLIKT 195

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 73.2 bits (180), Expect = 1e-14
 Identities = 57/211 (27%), Positives = 92/211 (43%), Gaps = 26/211 (12%)

Query: 35  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            V+ITG+  GLG+A+A  +   G R+ +A  + E    T+  L E        AGG    
Sbjct: 2   RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE--------AGG---- 49

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                      CDV + + +  L+     ++G ID+ +NNAG   G      F    +E 
Sbjct: 50  -----DGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASGGF----FEELSLED 100

Query: 155 ---IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
               ++ NL+G +   +  + + + Q K G I N+  + +G    P  + Y   K G+  
Sbjct: 101 WDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNI-ASMAGLMQGPAMSSYNVAKAGVVA 158

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
           L  +L  E    ++GVH   P    T+LL S
Sbjct: 159 LSETLLVELADDEIGVHVVCPSFFQTNLLDS 189

Length = 270

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 37/221 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITG    LG A+A+E   +G +V +  R+ E     V E++        AAGG + 
Sbjct: 11  KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIK--------AAGGEAL 62

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN--------------K 139
                     +  DV +   +++     + +FG  DI IN AG N              +
Sbjct: 63  ---------AVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIE 113

Query: 140 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 199
             K       E  E +   NL+G++L T+   + M  + KGG+I N+    S  + TPLT
Sbjct: 114 PTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINI---SSMNAFTPLT 169

Query: 200 AV--YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 238
            V  Y + K  +      L     +  + V+  +PG  LT+
Sbjct: 170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTE 210

Length = 278

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 72.4 bits (178), Expect = 1e-14
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 37/277 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            ++TGS+RG+GKA+A      G D  V  +RS ++   T  E+E        A G     
Sbjct: 7   ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE--------ALG----- 53

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                K   +  +V +   ++++      EFG +D+++NNA +    +P ++      + 
Sbjct: 54  ----RKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDW 108

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            ++ N    + C +EA ++M ++  GG I ++   GS       T V G +K  L  L  
Sbjct: 109 TMNINAKALLFCAQEAAKLM-EKVGGGKIISLSSLGSIRYLENYTTV-GVSKAALEALTR 166

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVK 274
            L  E     + V+  S G V TD L        K   N    L +  A+T   R+   +
Sbjct: 167 YLAVELAPKGIAVNAVSGGAVDTDAL--------KHFPNREELLEDARAKTPAGRMVEPE 218

Query: 275 GSGKAINYLTPPRILLALVTAWLRRGR-WFDDQGRAL 310
               A+ +L  P        A + RG+    D GR+L
Sbjct: 219 DVANAVLFLCSPE-------ADMIRGQTIIVDGGRSL 248

Length = 250

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 23/211 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           VITG++ G+G+A A      G  V+     +E+V  TV +++ N        GG +K   
Sbjct: 10  VITGASTGIGQASAIALAQEGAYVLAVD-IAEAVSETVDKIKSN--------GGKAKAYH 60

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           V         D+ +   V+  ++    +FG +D+  NNAG +     + ++  +  ++I+
Sbjct: 61  V---------DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIM 111

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + ++ G+ L T+  + +M +Q  GG I N   + SG ++    + Y + K  +     S+
Sbjct: 112 AVDMRGTFLMTKMLLPLMMEQ--GGSIIN-TSSFSGQAADLYRSGYNAAKGAVINFTKSI 168

Query: 217 FKESKRSKVGVHTASPGMVLTDLL--LSGST 245
             E  R  +  +  +PG + T L+  L+G++
Sbjct: 169 AIEYGRDGIRANAIAPGTIETPLVDKLTGTS 199

Length = 272

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 21/203 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG +RGLG  +A     +G RVV+++R +E +      LE        A G    
Sbjct: 13  KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE--------ALG---- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     IA DV + AD+++L+   +  FG +DI +NNAG   G  P      E  +
Sbjct: 61  -----IDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWG-APAEDHPVEAWD 114

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPL--TAVYGSTKCGLR 210
           ++++ N+ G  L ++   +        G I N+   AG GG+   +  T  Y ++K  + 
Sbjct: 115 KVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVI 174

Query: 211 QLQASLFKESKRSKVGVHTASPG 233
               +L  E     + V+  +PG
Sbjct: 175 NFTRALAAEWGPHGIRVNAIAPG 197

Length = 259

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 2e-14
 Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 20/204 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           V+TG+ RGLG A+A  F  +G  V++A+R       T ++L+E + E + AAG   ++  
Sbjct: 14  VVTGAGRGLGAAIALAFAEAGADVLIAAR-------TESQLDE-VAEQIRAAG---RRAH 62

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           V      +A D+  P     L+  AV  FG +DI +NN G      PLL  + +++    
Sbjct: 63  V------VAADLAHPEATAGLAGQAVEAFGRLDIVVNNVG-GTMPNPLLSTSTKDLADAF 115

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + N+  +   T  A+ +M +   GG + N+     G  +    A YG+ K  L      L
Sbjct: 116 TFNVATAHALTVAAVPLMLEHSGGGSVINISST-MGRLAGRGFAAYGTAKAALAHY-TRL 173

Query: 217 FKESKRSKVGVHTASPGMVLTDLL 240
                  ++ V+  +PG +LT  L
Sbjct: 174 AALDLCPRIRVNAIAPGSILTSAL 197

Length = 263

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 70.9 bits (174), Expect = 6e-14
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 18/203 (8%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TGST G+G  +AR    +G  +V+      +    V       K G+           
Sbjct: 6   LVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAA-KHGV----------- 53

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              KV     D+ +PA ++ +  +A  +FG +DI +NNAG  +   P+  F  E+ + I+
Sbjct: 54  ---KVLYHGADLSKPAAIEDMVAYAQRQFGGVDILVNNAGI-QHVAPIEDFPTEKWDAII 109

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + NL      TR A+  M+ Q   G I N+     G  ++   + Y + K G+  L   +
Sbjct: 110 ALNLSAVFHTTRLALPHMKKQ-GWGRIINIASV-HGLVASANKSAYVAAKHGVVGLTKVV 167

Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             E+  + V  +   PG VLT L
Sbjct: 168 ALETAGTGVTCNAICPGWVLTPL 190

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 70.5 bits (173), Expect = 6e-14
 Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 18/204 (8%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITGS+ G+G   A  F   G R+ +  R +E        LEE  +   + AG S KK 
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAE-------RLEETRQS-CLQAGVSEKKI 57

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
           L+      +  D+ E     ++ +  + +FG +DI +NNAG             EE +++
Sbjct: 58  LL------VVADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL-AKGGGEDQDIEEYDKV 110

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ NL   I  T+ A+  +      G I N+    +GG S P    Y  +K  L Q    
Sbjct: 111 MNLNLRAVIYLTKLAVPHLIKTK--GEIVNVSSV-AGGRSFPGVLYYCISKAALDQFTRC 167

Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
              E     V V++ SPG+++T  
Sbjct: 168 TALELAPKGVRVNSVSPGVIVTGF 191

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 6e-14
 Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 25/202 (12%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 97
           ITG + G G+ALA+  L +G RVV   RS  +         +                  
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDR----------------- 51

Query: 98  HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIV 156
                    DV +   +  +   A   FG ID+ +NNAG   G +  ++ +   E+ +  
Sbjct: 52  ---ALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGY--GHEGAIEESPLAEMRRQF 106

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+ G++  T+  +  MR + + GHI N+   G G  + P    Y  +K  L  +  SL
Sbjct: 107 EVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSMG-GLITMPGIGYYCGSKFALEGISESL 164

Query: 217 FKESKRSKVGVHTASPGMVLTD 238
            KE     + V    PG   TD
Sbjct: 165 AKEVAPFGIHVTAVEPGSFRTD 186

Length = 277

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 70.3 bits (172), Expect = 7e-14
 Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 22/208 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG   G+G A  R F   G +V V   + E+      ++           GG+++
Sbjct: 4   KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA--------KGGNAQ 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                      ACD+ +   V      A    G +D+ +NNAG +K F P  +      E
Sbjct: 56  ---------AFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWE 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++++ NL G++      +  M ++   G I N+   A   GSS    AVY + K GL   
Sbjct: 106 RLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGSSG--EAVYAACKGGLVAF 162

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             ++ +E  R  + V+   PG   T LL
Sbjct: 163 SKTMAREHARHGITVNVVCPGPTDTALL 190

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 70.2 bits (172), Expect = 8e-14
 Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 18/200 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           V+ G  + LG+ L      +G  V VA  +SE+      E+     E             
Sbjct: 6   VVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGE------------- 52

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K  G   D      V  LS      F  +D+ + +AG  K    +  F   + ++ +
Sbjct: 53  ---KAYGFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKS-AKITDFELGDFDRSL 108

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             NLVG  LC RE  ++M      G I  ++ + SG   +   + Y + K G   L  SL
Sbjct: 109 QVNLVGYFLCAREFSKLMIRDGIQGRIIQIN-SKSGKVGSKHNSGYSAAKFGGVGLTQSL 167

Query: 217 FKESKRSKVGVHTASPGMVL 236
             +     + V++   G +L
Sbjct: 168 ALDLAEHGITVNSLMLGNLL 187

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 69.7 bits (171), Expect = 1e-13
 Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 26/206 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV------ASRSSESVRMTVTELEENLKEGMMA 87
           R V++TG+  GLG+A A  F   G +VVV         S +S       ++E    G  A
Sbjct: 6   RVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGKA 65

Query: 88  AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 147
                               V    D +K+   A++ FG +DI +NNAG  +  +   + 
Sbjct: 66  VANYD--------------SV---EDGEKIVKTAIDAFGRVDILVNNAGILRD-RSFAKM 107

Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
           + E+ + ++  +L GS   TR A   MR Q  G  I     AG  G+     A Y + K 
Sbjct: 108 SEEDWDLVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFG--QANYSAAKL 165

Query: 208 GLRQLQASLFKESKRSKVGVHTASPG 233
           GL  L  +L  E  +  +  +T +P 
Sbjct: 166 GLLGLSNTLAIEGAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 69.8 bits (171), Expect = 1e-13
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 36/216 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++ITG   G+G ALA+ FL  G+ V++  R+           EE L E          K 
Sbjct: 8   ILITGGASGIGLALAKRFLELGNTVIICGRN-----------EERLAEA---------KA 47

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE---- 151
                +    CDV +    ++L  +   E+ ++++ INNAG  +        T  E    
Sbjct: 48  ENPE-IHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNE----DLTGAEDLLD 102

Query: 152 -IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCG 208
             EQ ++TNL+  I  T   +  +  QP+   I N+    SG +  P+  T VY +TK  
Sbjct: 103 DAEQEIATNLLAPIRLTALLLPHLLRQPE-ATIINVS---SGLAFVPMASTPVYCATKAA 158

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 244
           +     +L ++ K + V V   +P +V T    + +
Sbjct: 159 IHSYTLALREQLKDTSVEVIELAPPLVDTTEGNTQA 194

Length = 245

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 69.6 bits (170), Expect = 1e-13
 Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 46/240 (19%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG  +G+GKA+       G +VV+   SS+       E  ENL   +   G       
Sbjct: 10  IVTGGAKGIGKAITVALAQEGAKVVINYNSSK-------EAAENLVNELGKEGH------ 56

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQ 154
               V  +  DV +  D  +L   AVN FG +DI +NNAG   ++ FK L     E+ E+
Sbjct: 57  ---DVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL---NREDWER 110

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG----AGSGGSSTPLTAVYGSTKCGLR 210
           ++  NL  S+  T  A+     + + G I ++      AG  G +      Y + K G+ 
Sbjct: 111 VIDVNL-SSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTN-----YSAAKAGML 164

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 270
               SL  E  ++ V V+   PG + T++               + E+PE V + +V +I
Sbjct: 165 GFTKSLALELAKTNVTVNAICPGFIDTEM---------------VAEVPEEVRQKIVAKI 209

Length = 247

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 68.6 bits (168), Expect = 3e-13
 Identities = 66/235 (28%), Positives = 93/235 (39%), Gaps = 35/235 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  VITG   G+G A AR     G  VVV     E+ +    E+           GG   
Sbjct: 8   RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----------GGLF- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV +   V  L + A   +GS+DI  NNAG +      +  T  +  
Sbjct: 56  ----------VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAW 105

Query: 154 QIVS-TNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           Q V   NL    LC + A+  M  Q KG  I         GS+T   + Y ++K G+  +
Sbjct: 106 QRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS-YTASKGGVLAM 164

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
              L  +  R  + V+   PG V T LL        +++F    + PE  AR LV
Sbjct: 165 SRELGVQFARQGIRVNALCPGPVNTPLL--------QELF---AKDPERAARRLV 208

Length = 255

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 68.5 bits (168), Expect = 4e-13
 Identities = 49/207 (23%), Positives = 85/207 (41%), Gaps = 22/207 (10%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            +  ++T S  G+GKA A      G  + +   S E       E  +   E + + G   
Sbjct: 2   AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE-------EGAKETAEEVRSHG--- 51

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +      D+ +  +  +  +  +   G ID+ +NNAG      P L    +E 
Sbjct: 52  ------VRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK-APFLDMDFDEW 104

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLR 210
            +I + ++ G+ LC++ A R M  Q +GG I N+    S    TPL   + Y + K  L 
Sbjct: 105 RKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINIT---SVHEHTPLPGASAYTAAKHALG 161

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLT 237
            L  ++  E     + V+  +PG + T
Sbjct: 162 GLTKAMALELVEHGILVNAVAPGAIAT 188

Length = 256

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 4e-13
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 28/206 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           ++V++TG++ G+G+A A      G RVV A+R           L+    E     G    
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAAR-------NAAALDRLAGE----TGCE-- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV + A ++     A+   G+ D  +N AG     +  L  T E  +
Sbjct: 57  ---------PLRLDVGDDAAIRA----ALAAAGAFDGLVNCAGIASL-ESALDMTAEGFD 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++++ N  G+ L  R   R M    +GG I N+          P    Y ++K  L  + 
Sbjct: 103 RVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQA-ALVGLPDHLAYCASKAALDAIT 161

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
             L  E     + V++ +P + LT +
Sbjct: 162 RVLCVELGPHGIRVNSVNPTVTLTPM 187

Length = 245

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 67.9 bits (166), Expect = 4e-13
 Identities = 57/202 (28%), Positives = 93/202 (46%), Gaps = 26/202 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+T G G+ + R F+  G +V+   R  E ++    EL +NL              
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYI------------ 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      DV   A ++++      E+ +ID+ +NNAG   G +P  + + E+ E +
Sbjct: 51  --------AQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETM 102

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQ 213
           + TN  G +  TR  +  M ++   GHI N+   GS   S P     VYG+TK  +RQ  
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVERNH-GHIINI---GSTAGSWPYAGGNVYGATKAFVRQFS 158

Query: 214 ASLFKESKRSKVGVHTASPGMV 235
            +L  +   + V V    PG+V
Sbjct: 159 LNLRTDLHGTAVRVTDIEPGLV 180

Length = 248

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 5e-13
 Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 24/210 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +   +TG+  G+G+A A      G  + +  R ++ +  TV +          A GG+  
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADAR--------ALGGT-- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFA---VNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
              V    A    D+   +D   ++ FA       GS+D+ +N AG +  +  + + T+E
Sbjct: 51  ---VPEHRAL---DI---SDYDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRLTHE 100

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
           +  ++V  NL+G I      +  M    +GGH+ N+  A +G  + P  A Y ++K GLR
Sbjct: 101 QWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA-AGLVALPWHAAYSASKFGLR 159

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDLL 240
            L   L  +  R  +GV    PG V T L+
Sbjct: 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLV 189

Length = 272

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 67.6 bits (166), Expect = 5e-13
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 31/207 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           + V++TG+ RG+G+A   + L  G  +V  A+R  ESV                      
Sbjct: 7   KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESV---------------------- 44

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
               +  +V  +  DV +PA V   +  A      + I +NNAG  +    LL+   + +
Sbjct: 45  --TDLGPRVVPLQLDVTDPASVAAAAEAA----SDVTILVNNAGIFRTGSLLLEGDEDAL 98

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
              + TN  G +   R    V+     GG I N+    S   + P    Y ++K     L
Sbjct: 99  RAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLS-WVNFPNLGTYSASKAAAWSL 156

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L  E       V    PG + TD+
Sbjct: 157 TQALRAELAPQGTRVLGVHPGPIDTDM 183

Length = 238

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 68.5 bits (168), Expect = 5e-13
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 26/208 (12%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           VITG+  G G A AR     G ++V+A    +++   V EL         A G       
Sbjct: 10  VITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELR--------AQG------- 54

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
             A+V G+  DV + A V+ L++ A+  FG++ +  NNAG   G   + + +  + E ++
Sbjct: 55  --AEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG-GLVWENSLADWEWVL 111

Query: 157 STNLVGSILCTREAMRVM-----RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
             NL G I   R    +M     +D    GHI N   + +G  + P   +Y  +K  +  
Sbjct: 112 GVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNT-ASMAGLLAPPAMGIYNVSKHAVVS 170

Query: 212 LQASLFKESK--RSKVGVHTASPGMVLT 237
           L  +L+++      +VG     P  V T
Sbjct: 171 LTETLYQDLSLVTDQVGASVLCPYFVPT 198

Length = 287

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 67.5 bits (165), Expect = 6e-13
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 30/207 (14%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG++RGLG A+AR F   G RVVV    S       TE  E +     AA    +  
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRS-------TESAEAV-----AAEAGERAI 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE-- 153
            + A       DV +   VQ +   A N FG +D  +NNA  +  F P  + T + I+  
Sbjct: 51  AIQA-------DVRDRDQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWE 103

Query: 154 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV--YGSTKCG 208
              Q +   + G++   +  +   +++   G + N+   G+     P+     Y + K  
Sbjct: 104 DYQQQLEGAVKGALNLLQAVLPDFKER-GSGRVINI---GTNLFQNPVVPYHDYTTAKAA 159

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMV 235
           L     ++ KE     + V+  S G++
Sbjct: 160 LLGFTRNMAKELGPYGITVNMVSGGLL 186

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 67.7 bits (165), Expect = 7e-13
 Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 27/218 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  VITG   G+G A   EF   G RVV+       +R  V          + A G    
Sbjct: 7   RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAV--------NHLRAEG---- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V G+ CDV    +V  L++ A    G +D+  +NAG   G  P+++ T+++  
Sbjct: 55  -----FDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVG-GPIVEMTHDDWR 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHI-FNMDGAG---SGGSSTPLTAVYGSTKCGL 209
            ++  +L GSI      +  + +Q  GGH+ F    AG   + G        YG  K G+
Sbjct: 109 WVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGA-----YGVAKYGV 163

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
             L  +L +E     +GV    P +V T+L+ +   I+
Sbjct: 164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR 201

Length = 275

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 67.2 bits (164), Expect = 1e-12
 Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 23/207 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG   GLG A A      G ++ +   + E +      L E   +          
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPD---------- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+V  I  DV + A V+   +  V +FG ID + NNAG          F  +E +
Sbjct: 54  -----AEVLLIKADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFD 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG---SGGSSTPLTAVYGSTKCGLR 210
           ++VS NL G      + ++VMR+Q   G I N    G     G+ +     Y + K G+ 
Sbjct: 109 KVVSINLRGVFYGLEKVLKVMREQ-GSGMIVNTASVGGIRGVGNQSG----YAAAKHGVV 163

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLT 237
            L  +   E  +  + ++  +PG +LT
Sbjct: 164 GLTRNSAVEYGQYGIRINAIAPGAILT 190

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 67.2 bits (164), Expect = 1e-12
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG   G+G+++ R F   G +V +     +        L +N+ + +   GG      
Sbjct: 22  LVTGGATGIGESIVRLFHKHGAKVCIVDLQDD--------LGQNVCDSL---GGEPNVCF 70

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQI 155
            H       CDV    DV +  +F V++FG++DI +NNAG      P ++     E E++
Sbjct: 71  FH-------CDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKV 123

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              N+ G  L  + A R+M    KG  +     A + G   P    Y  +K  +  L  S
Sbjct: 124 FDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGP--HAYTGSKHAVLGLTRS 181

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLS 242
           +  E  +  + V+  SP  V T L L+
Sbjct: 182 VAAELGKHGIRVNCVSPYAVPTALALA 208

Length = 280

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 24/201 (11%)

Query: 31  AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
            G R +++TG++ G+G+A A +F   G  VV  +R  +        L + + + +  AGG
Sbjct: 39  TGKR-ILLTGASSGIGEAAAEQFARRGATVVAVARRED--------LLDAVADRITRAGG 89

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN- 149
            +      A    + CD+ +   V  L        G +DI INNAG +   +PL +  + 
Sbjct: 90  DA-----MA----VPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR-RPLAESLDR 139

Query: 150 -EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
             ++E+ +  N    +   R     M ++   GHI N+   G    ++PL +VY ++K  
Sbjct: 140 WHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGVLSEASPLFSVYNASKAA 198

Query: 209 LRQLQASLFKESKRSKVGVHT 229
           L  +   +  E++    GVH+
Sbjct: 199 LSAVSRVI--ETEWGDRGVHS 217

Length = 293

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.8 bits (161), Expect = 2e-12
 Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 48/188 (25%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG+  G+G A AR FL  G +V    +  +       +L  N             
Sbjct: 6   KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP------DLSGNF------------ 47

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
               H        D+ +  +         +   S+DI  N AG    +KPLL  + EE +
Sbjct: 48  ----HFLQL----DLSDDLEP------LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQ 93

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-----AGSGGSSTPLTAVYGSTKCG 208
            I  TNL  + L TR  +  M ++ K G I NM       AG GG      A Y ++K  
Sbjct: 94  HIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIASFVAGGGG------AAYTASKHA 146

Query: 209 L----RQL 212
           L    +QL
Sbjct: 147 LAGFTKQL 154

Length = 235

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 65.3 bits (160), Expect = 3e-12
 Identities = 63/279 (22%), Positives = 106/279 (37%), Gaps = 42/279 (15%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            +++ ITG+  G+G+A A  F   G RV     +   +     EL           G   
Sbjct: 1   MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-----------GAG- 48

Query: 93  KKNLVHAKVAGIACDVCEPADVQK-LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
             N     +     DV + A     L++FA    G +D+  NNAG  +G  P      E 
Sbjct: 49  --NAWTGAL-----DVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG-GPFEDIPLEA 100

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            ++++  N+ G +     A+  ++  P G  + N   A S     P  AVY +TK  +R 
Sbjct: 101 HDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSA-SAIYGQPGLAVYSATKFAVRG 158

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGS------TIQNKQMFNIICELPETVART 265
           L  +L  E +R  + V    P  V T +L   S      + +      +    PE VA  
Sbjct: 159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKR-LGVRLT---PEDVAEA 214

Query: 266 LVPRIRVVKGSGKAINYLTPPRILL-----ALVTAWLRR 299
           +   ++        +++    +  L      L   ++RR
Sbjct: 215 VWAAVQ----HPTRLHWPVGKQAKLLAFLARLSPGFVRR 249

Length = 260

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 24/200 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+ +G+G A+AR    +G RV    R+ E +   V +L                  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRY--------------- 45

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                 A    DV + A V ++      E+G ID+ +N AG  +    +   ++E+ +  
Sbjct: 46  --GYPFATYKLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILR-LGAIDSLSDEDWQAT 102

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQ 213
            + N  G    ++     M+ + + G I  +   GS  ++ P    A Y ++K  L  L 
Sbjct: 103 FAVNTFGVFNVSQAVSPRMKRR-RSGAIVTV---GSNAANVPRMGMAAYAASKAALTMLT 158

Query: 214 ASLFKESKRSKVGVHTASPG 233
             L  E     +  +  SPG
Sbjct: 159 KCLGLELAPYGIRCNVVSPG 178

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 65.2 bits (159), Expect = 5e-12
 Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 27/203 (13%)

Query: 35  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            V+ITG + G+G+ALA  F  +G  V   +R +E V            E + AAG     
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDV------------EALAAAG----- 45

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                    +  DV + A + +L+     E G +D+ INNAG      PLL    E + +
Sbjct: 46  ------FTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYG-AMGPLLDGGVEAMRR 98

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
              TN+   +  TR    ++R     G + N+ G+ SG   TP    Y ++K  +  L  
Sbjct: 99  QFETNVFAVVGVTRALFPLLRR--SRGLVVNI-GSVSGVLVTPFAGAYCASKAAVHALSD 155

Query: 215 SLFKESKRSKVGVHTASPGMVLT 237
           +L  E     V V    PG + +
Sbjct: 156 ALRLELAPFGVQVMEVQPGAIAS 178

Length = 274

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 25/163 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG + G+GKA+A+ F   G  VV+  R+ E +     E+E+    G           
Sbjct: 4   VIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PG----------- 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQ 154
               +V  +  DV  P DVQK+      +FG ID  INNA  N  F  P    +      
Sbjct: 51  ----QVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGN--FICPAEDLSVNGWNS 104

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-----GAGSG 192
           ++   L G+  C++   +   ++   G+I NM       AG G
Sbjct: 105 VIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPG 147

Length = 252

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 6e-12
 Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 22/205 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+G A+A+ +  +G  +V    + E V   +    E    G+        
Sbjct: 11  KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE---LGI-------- 59

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +  G  CDV +   VQ + +    E G IDI +NNAG  K   P+L+ + E+  
Sbjct: 60  ------EAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKR-IPMLEMSAEDFR 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG-GSSTPLTAVYGSTKCGLRQL 212
           Q++  +L    + ++  +  M  +   G I N+    S  G  T   + Y + K GL+ L
Sbjct: 113 QVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSMMSELGRET--VSAYAAAKGGLKML 169

Query: 213 QASLFKESKRSKVGVHTASPGMVLT 237
             ++  E   + +  +   PG + T
Sbjct: 170 TKNIASEYGEANIQCNGIGPGYIAT 194

Length = 265

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 7e-12
 Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 33/209 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+  G+G+ALAR FL +GDRV+     + ++      L +              
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGD-------------- 48

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+   +ACD+ + A +      A  E G +D+ + NAG  +     L  T     
Sbjct: 49  -----ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARAAS--LHDTTPASW 101

Query: 154 QI-VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV----YGSTKCG 208
           +   + NL  + LC    +  M  + +G  + N+      GS   + A+    Y + K G
Sbjct: 102 RADNALNLEAAYLCVEAVLEGMLKRSRGA-VVNI------GSVNGMAALGHPAYSAAKAG 154

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLT 237
           L      L  E  R  +  +  +PG V T
Sbjct: 155 LIHYTKLLAVEYGRFGIRANAVAPGTVKT 183

Length = 257

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 64.4 bits (157), Expect = 7e-12
 Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 31/208 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+G+A  +    +G RVV  SR+   +   V E                 
Sbjct: 8   KRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE----------------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                    GI     + +D    +  A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 51  -------CPGIEPVCVDLSDWDA-TEEALGSVGPVDLLVNNAAVAI-LQPFLEVTKEAFD 101

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 211
           +    N+   I  ++   R M  +   G I N+    S  S   LT   VY STK  L  
Sbjct: 102 RSFDVNVRAVIHVSQIVARGMIARGVPGSIVNVS---SQASQRALTNHTVYCSTKAALDM 158

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L   +  E    K+ V++ +P +V+TD+
Sbjct: 159 LTKVMALELGPHKIRVNSVNPTVVMTDM 186

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 64.6 bits (158), Expect = 8e-12
 Identities = 47/198 (23%), Positives = 75/198 (37%), Gaps = 20/198 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV++G   GLG+ LA     +G  VV+A+R       T   L+E   E +   G      
Sbjct: 8   VVVSGVGPGLGRTLAVRAARAGADVVLAAR-------TAERLDEVAAE-IDDLGRR---- 55

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  D+ +      L   A+  FG +D  +NNA      KPL          +
Sbjct: 56  -----ALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAV 110

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  N++G++  T+     +     GG I  ++       S P    Y   K  L     S
Sbjct: 111 IELNVLGTLRLTQAFTPALA--ESGGSIVMINSM-VLRHSQPKYGAYKMAKGALLAASQS 167

Query: 216 LFKESKRSKVGVHTASPG 233
           L  E     + V++ +PG
Sbjct: 168 LATELGPQGIRVNSVAPG 185

Length = 258

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 47/206 (22%), Positives = 84/206 (40%), Gaps = 22/206 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + VV+TG+ RG+G  LAR     G ++ +       +     EL                
Sbjct: 10  KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-------------- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  +  DV + A +Q  +  AV  FG ID+ + NAG   G   + Q   +   
Sbjct: 56  ----DDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG-GSVAQVDPDAFR 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL+G     R  +  + +  + G++  +    +  ++ P  A Y ++K G+    
Sbjct: 111 RVIDVNLLGVFHTVRATLPALIE--RRGYVLQVSSLAAFAAA-PGMAAYCASKAGVEAFA 167

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L  E     V V +A    + TDL
Sbjct: 168 NALRLEVAHHGVTVGSAYLSWIDTDL 193

Length = 296

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 1e-11
 Identities = 53/214 (24%), Positives = 85/214 (39%), Gaps = 44/214 (20%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG T+G+G A     L +G RVV  +RS            ++L EG         
Sbjct: 10  KRALVTGGTKGIGAATVARLLEAGARVVTTARSRP----------DDLPEG--------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK----GFKPLLQFTN 149
                  V  +A D+        ++   +   G +DI ++  G +     GF  L   T+
Sbjct: 51  -------VEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAAL---TD 100

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGG--HIFNMDGAGSGGSSTPL---TAVYGS 204
           EE +  ++ NL+ ++   R  +  M  +  G   H+       S     PL   T  Y +
Sbjct: 101 EEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHV------TSIQRRLPLPESTTAYAA 154

Query: 205 TKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 238
            K  L     SL KE     V V+T SPG + T+
Sbjct: 155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETE 188

Length = 260

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 63.6 bits (155), Expect = 1e-11
 Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 31/207 (14%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+ +G+G+A+AR  L +G  V+        +      L                  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL---------------- 44

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      DV + A V+++ +  + E G ID  +N AG  +        + E+ EQ 
Sbjct: 45  --------TPLDVADAAAVREVCSRLLAEHGPIDALVNCAGVLR-PGATDPLSTEDWEQT 95

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQ 213
            + N+ G     +     M+D+ + G I  +    S  +  P    A YG++K  L  L 
Sbjct: 96  FAVNVTGVFNLLQAVAPHMKDR-RTGAIVTV---ASNAAHVPRISMAAYGASKAALASLS 151

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
             L  E     V  +  SPG   T + 
Sbjct: 152 KCLGLELAPYGVRCNVVSPGSTDTAMQ 178

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 64.0 bits (156), Expect = 1e-11
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+  G+G+A A+ F   G RVVVA R +E+                +AAGG   
Sbjct: 6   RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAA---------IAAGG--- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +      DV     V+ L +F    +G +D+ +NNAG   G   ++     + +
Sbjct: 54  ------RAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCG-GTVVTTDEADWD 106

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM--DGAGSGGSSTPLTAVYGSTKCGLRQ 211
            ++  N+ G  L  + A+ +M+ Q  GG I N     A +GG      A Y ++K  +  
Sbjct: 107 AVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTASQLALAGG---RGRAAYVASKGAIAS 162

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLL 240
           L  ++  +     + V+  +PG + T   
Sbjct: 163 LTRAMALDHATDGIRVNAVAPGTIDTPYF 191

Length = 252

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 26/206 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V ITG   GLG+A A      G RV +  R +  +  T+         G+ A      
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLP--------GVPADAL--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEE 151
                 ++ GI  D+ +P   ++  +    +FG +D  +N AG    F    +     + 
Sbjct: 57  ------RIGGI--DLVDPQAARRAVDEVNRQFGRLDALVNIAG---AFVWGTIADGDADT 105

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            +++   N+  ++  ++ A+  +     GG I N+ GAG+   + P    Y + K G+ +
Sbjct: 106 WDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNI-GAGAALKAGPGMGAYAAAKAGVAR 163

Query: 212 LQASLFKESKRSKVGVHTASPGMVLT 237
           L  +L  E     + V+   P ++ T
Sbjct: 164 LTEALAAELLDRGITVNAVLPSIIDT 189

Length = 239

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 63.7 bits (155), Expect = 1e-11
 Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 21/206 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG+  G+GK +A  F  +G  VVV+  ++++    V E+++         GG      
Sbjct: 15  IITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--------LGG------ 60

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +     CD+    ++  L++FA+++ G +DI +NNAG   G KP       +  +  
Sbjct: 61  ---QAFACRCDITSEQELSALADFALSKLGKVDILVNNAG-GGGPKP-FDMPMADFRRAY 115

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+      ++     M ++  GG I  +    +  +       Y S+K     L  ++
Sbjct: 116 ELNVFSFFHLSQLVAPEM-EKNGGGVILTITSM-AAENKNINMTSYASSKAAASHLVRNM 173

Query: 217 FKESKRSKVGVHTASPGMVLTDLLLS 242
             +     + V+  +PG +LTD L S
Sbjct: 174 AFDLGEKNIRVNGIAPGAILTDALKS 199

Length = 255

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 63.5 bits (155), Expect = 2e-11
 Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 22/179 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            ++TG T+GLG A+AR F   G   +V+  R++E       ELE                
Sbjct: 9   ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-------------- 54

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIE 153
               AK   +  D+ +  D +++   A   FG +D  +N AG T++G   +L  + E  +
Sbjct: 55  ---GAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRG--TILDTSPELFD 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +  + N+       +EA+++MR +   G I N+    + G   P  A Y ++K  L  L
Sbjct: 110 RHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-PFLAAYCASKGALATL 167

Length = 260

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 2e-11
 Identities = 57/209 (27%), Positives = 86/209 (41%), Gaps = 31/209 (14%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++ G G     E    G  V+   R+ E         +ENL               
Sbjct: 7   IVTGASSGFGLLTTLELAKKGYLVIATMRNPEK--------QENLLSQATQLNLQQ---- 54

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQI 155
            + KV     DV +   +       + E G ID+ +NNAG  N GF  + +   EE  + 
Sbjct: 55  -NIKV--QQLDVTDQNSIHNFQLV-LKEIGRIDLLVNNAGYANGGF--VEEIPVEEYRKQ 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
             TN+ G+I  T+  +  MR Q K G I N+  + SG    P  + Y S+K  L      
Sbjct: 109 FETNVFGAISVTQAVLPYMRKQ-KSGKIINI-SSISGRVGFPGLSPYVSSKYALEG---- 162

Query: 216 LFKESKRSKV---GVHTA--SPGMVLTDL 239
            F ES R ++   G+  A   PG   T++
Sbjct: 163 -FSESLRLELKPFGIDVALIEPGSYNTNI 190

Length = 280

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 34/241 (14%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
               +ITG++ G+GKA A  F  +G  + + +RS +++     EL               
Sbjct: 6   MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS------------- 52

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTN 149
                  K A  + D+  P  +       + +FG  D+ INNAG   T     PLL+   
Sbjct: 53  ----TGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTG----PLLEMPL 104

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
            + + ++  NL     C    +  MR +  GG I N+  + +  ++ P    Y  +K  L
Sbjct: 105 SDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINV-SSIAARNAFPQWGAYCVSKAAL 162

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLS---GSTIQNKQMFNIICELPETVARTL 266
                 L +E +   + V T + G V T L  +    +      M +     PE VA+T+
Sbjct: 163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQADFDRSAMLS-----PEQVAQTI 217

Query: 267 V 267
           +
Sbjct: 218 L 218

Length = 241

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 62.1 bits (151), Expect = 5e-11
 Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+ +G+G A+A+  +  G +V +   + E+ +    +L +         GG      
Sbjct: 6   LVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK--------DGG------ 51

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K   +  DV +   V       V+ FG +++ +NNAG      P+   T E+ +++ 
Sbjct: 52  ---KAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPT-TPIETITEEQFDKVY 107

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + N+ G I   + A    +    GG I N    AG  G+  P  AVY STK  +R L  +
Sbjct: 108 NINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN--PELAVYSSTKFAVRGLTQT 165

Query: 216 LFKESKRSKVGVHTASPGMVLT 237
             ++     + V+  +PG+V T
Sbjct: 166 AARDLASEGITVNAYAPGIVKT 187

Length = 256

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 61.8 bits (150), Expect = 7e-11
 Identities = 64/266 (24%), Positives = 108/266 (40%), Gaps = 34/266 (12%)

Query: 38  ITGSTRGLGKA----LAREF--LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
           ITG+ RG G+A    LA E   +++ D     S        T  +L+E  +  + A G  
Sbjct: 8   ITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETAR-LVEALG-- 64

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                   KV     DV + A+V+ +    V +FG +D+ + NAG    +    + + E+
Sbjct: 65  -------RKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGV-LSYGRSWELSEEQ 116

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            + ++  NL G     +  +  M ++  GG I  +  + +G  + P  A Y + K GL  
Sbjct: 117 WDTVLDINLTGVWRTCKAVVPHMIERGNGGSII-ITSSVAGLKALPGLAHYAAAKHGLVG 175

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
           L  +L  E     + V++  P  V T +      I  + M     + PE  AR  +P   
Sbjct: 176 LTKTLANELAEYGIRVNSIHPYSVDTPM------IAPEAMREAFLKYPE-AARAFMP--- 225

Query: 272 VVKGSGKAINYLTPPRILLALVTAWL 297
                   ++   PP  +   V  WL
Sbjct: 226 -----ALPVSGFVPPEDVADAV-LWL 245

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 61.1 bits (149), Expect = 9e-11
 Identities = 50/203 (24%), Positives = 79/203 (38%), Gaps = 24/203 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+ + +G+A+A      G RVVV    SE       E +  LK+ + A        
Sbjct: 3   ALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSE------AEAQR-LKDELNALRN----- 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--KPLLQFTNEEIE 153
                   +  D+ + A    L   A   FG  D+ +NNA     F   PL Q + +   
Sbjct: 51  ----SAVLVQADLSDFAACADLVAAAFRAFGRCDVLVNNASA---FYPTPLGQGSEDAWA 103

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++   NL    L  +   R +      G I N+  A +    T   A Y  +K  L  L 
Sbjct: 104 ELFGINLKAPYLLIQAFARRLAGSRN-GSIINIIDAMTDRPLTGYFA-YCMSKAALEGLT 161

Query: 214 ASLFKESKRSKVGVHTASPGMVL 236
            S   E     + V+  +PG++L
Sbjct: 162 RSAALELA-PNIRVNGIAPGLIL 183

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 1e-10
 Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 26/213 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++ GLG   A+    +G +VV+ASR  E ++    E+E        A GG++ 
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIE--------AEGGAA- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
               H     ++ DV +   ++     A  E G+IDI +NN+G +   K L+  T  + +
Sbjct: 61  ----HV----VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK-LVDVTPADFD 111

Query: 154 QIVSTNLVGSILCTREAMR--VMR-----DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 206
            +  TN  G+    +E  +  + R     +   GG I N+  + +G    P   +Y  +K
Sbjct: 112 FVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINI-ASVAGLRVLPQIGLYCMSK 170

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             +  +  ++  E  R  + V+   PG + T++
Sbjct: 171 AAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203

Length = 258

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 23/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + ++ITG++ GLG  +AREF   G  + + +R ++        LEE LK  ++A      
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTD-------RLEE-LKAELLARYPG-- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KVA  A DV +   V ++     +E G +D  I NAG  KG   L        +
Sbjct: 53  -----IKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKG-ARLGTGKFWANK 106

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGH---IFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
               TN V ++     AM + R+Q   GH   I ++  +   G      A Y ++K G+ 
Sbjct: 107 ATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSV--SAVRGLPGVKAA-YAASKAGVA 162

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
            L   L  E  ++ + V T  PG + +++
Sbjct: 163 SLGEGLRAELAKTPIKVSTIEPGYIRSEM 191

Length = 248

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 1e-10
 Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 55/221 (24%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMM 86
           + + ITG++RG+G A+A      G  +V+A++++E       ++     E+E        
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIE-------- 58

Query: 87  AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ 146
           AAGG         +   +  DV +   V      AV  FG IDI +NNA         + 
Sbjct: 59  AAGG---------QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASA-------IN 102

Query: 147 FTNEE---------IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF------NMDGAGS 191
            T  E         ++QI   N+ G+ L ++  +  ++      HI       N+D    
Sbjct: 103 LTGTEDTPMKRFDLMQQI---NVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWF 158

Query: 192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASP 232
              +    A YG + C L      L +E +   + V+   P
Sbjct: 159 APHTAYTMAKYGMSLCTL-----GLAEEFRDDGIAVNALWP 194

Length = 273

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 61.0 bits (148), Expect = 1e-10
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG+ +G+G+ +AR F   G  +++   S E     + +L + L               
Sbjct: 10  LITGALQGIGEGIARVFARHGANLILLDISPE-----IEKLADELCGR------------ 52

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +   +  DV +PA V      A  + G IDI +NNAG  +     L  ++E+ +  +
Sbjct: 53  -GHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHI 110

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+ G    T+  +  M  + K G I  M        + P    Y  TK  +  L  SL
Sbjct: 111 DINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSL 169

Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             E  +S + V+   PG V T +
Sbjct: 170 AVEYAQSGIRVNAICPGYVRTPM 192

Length = 263

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 18/209 (8%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG +RG+G+A A      G  V V  + +      V  L       +  AGG      
Sbjct: 5   LVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNL-------ITQAGG------ 51

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K   +  D+ +   V  +          +   +NNAG       +   T E I +++
Sbjct: 52  ---KAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVL 108

Query: 157 STNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           STN+ G  LC REA++ M  +    GG I N+  A S   +      Y ++K  +  L  
Sbjct: 109 STNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTT 168

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSG 243
            L  E     + V+   PG + T++  SG
Sbjct: 169 GLSLEVAAQGIRVNCVRPGFIYTEMHASG 197

Length = 247

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 60.6 bits (147), Expect = 1e-10
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 30/153 (19%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG ++G+GKA+       G  V+       S                        
Sbjct: 7   KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------------------------ 42

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
               +  V     DV     V K  ++ ++++G IDI +NNAG    +  +     +E +
Sbjct: 43  ----YNDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWD 97

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           +I++ N+ G  L ++  +  M  Q   G I N+
Sbjct: 98  RIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINI 129

Length = 258

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 47/206 (22%), Positives = 86/206 (41%), Gaps = 28/206 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG +RG+G+ +A+ FL +G RV++++R +E+      EL              S 
Sbjct: 7   KIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL--------------SA 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A    I  D+     ++ L          +D+ +NNAG   G  PL  F     +
Sbjct: 53  YGECIA----IPADLSSEEGIEALVARVAERSDRLDVLVNNAGATWG-APLEAFPESGWD 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGH------IFNMDGAGSGGSSTPLTAVYGSTKC 207
           +++  N+      T+  + ++R      +      I ++ G    G        YG++K 
Sbjct: 108 KVMDINVKSVFFLTQALLPLLRAAATAENPARVINIGSIAGIVVSGLE---NYSYGASKA 164

Query: 208 GLRQLQASLFKESKRSKVGVHTASPG 233
            + QL   L KE     + V+  +PG
Sbjct: 165 AVHQLTRKLAKELAGEHITVNAIAPG 190

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 61.8 bits (150), Expect = 2e-10
 Identities = 53/213 (24%), Positives = 83/213 (38%), Gaps = 22/213 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R   +TG   G+G+  AR     G  VV+A  + E+      E+  N + G         
Sbjct: 415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI--NGQFGA-------- 464

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +  DV +   V+         +G +DI +NNAG      P  + T +E +
Sbjct: 465 -----GRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS-SPFEETTLQEWQ 518

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             +     G  L  REA R MR+Q  GG+I     + +   +    + Y + K     L 
Sbjct: 519 LNLDILATGYFLVAREAFRQMREQGLGGNIV-FIASKNAVYAGKNASAYSAAKAAEAHLA 577

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI 246
             L  E     + V+T +P     D +L GS I
Sbjct: 578 RCLAAEGGTYGIRVNTVNP-----DAVLQGSGI 605

Length = 676

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 60.1 bits (146), Expect = 3e-10
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG+++G+G A A  F   G  + + +R ++++        E L   + AA G   
Sbjct: 8   KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL--------EALAADLRAAHG--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  VA  A D+  P   ++L+  A    G IDI +NNAG   G   L    +    
Sbjct: 57  -----VDVAVHALDLSSPEAREQLAAEA----GDIDILVNNAGAIPG-GGLDDVDDAAWR 106

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST-KCGLRQL 212
                 + G I  TR A   M+ +   G I N+   G+ G +     + GS     L   
Sbjct: 107 AGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNV--IGAAGENPDADYICGSAGNAALMAF 163

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLL 241
             +L  +S    V V   +PG V TD +L
Sbjct: 164 TRALGGKSLDDGVRVVGVNPGPVATDRML 192

Length = 259

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 59.6 bits (145), Expect = 3e-10
 Identities = 50/217 (23%), Positives = 81/217 (37%), Gaps = 34/217 (15%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           V+TG   GLG A     L  G +VV+    +          E   K G            
Sbjct: 6   VVTGGASGLGLATVERLLAQGAKVVILDLPNS-------PGETVAKLG------------ 46

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-----GFKPLLQFTNEE 151
                  +  DV    DV+     A  +FG +DI +N AG          K     + E 
Sbjct: 47  --DNCRFVPVDVTSEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLEL 104

Query: 152 IEQIVSTNLVGSILCTREAMRVM-RDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGST 205
            +++++ NL+G+    R A   M +++P     +G  I     A   G      A Y ++
Sbjct: 105 FQRVINVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQ--IGQAAYSAS 162

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
           K G+  +   + ++     + V T +PG+  T LL  
Sbjct: 163 KGGIVGMTLPIARDLAPQGIRVVTIAPGLFDTPLLAG 199

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 60.0 bits (146), Expect = 3e-10
 Identities = 51/211 (24%), Positives = 83/211 (39%), Gaps = 21/211 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG   G+G+A+A  F   G  V +     E       +  E  K+ +   G    
Sbjct: 27  KKALITGGDSGIGRAVAIAFAREGADVAINYLPEE------EDDAEETKKLIEEEGR--- 77

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   I  D+ + +  + L    V EFG +DI +NNA      + +   T E++E
Sbjct: 78  ------KCLLIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLE 131

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +   TN+      T+ A+  +    KG  I N        GS   L   Y +TK  +   
Sbjct: 132 KTFRTNIFSMFYLTKAALPHL---KKGSSIINTTSVTAYKGSPHLLD--YAATKGAIVAF 186

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
              L  +     + V+  +PG + T L+ S 
Sbjct: 187 TRGLSLQLAEKGIRVNAVAPGPIWTPLIPSS 217

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 59.4 bits (144), Expect = 3e-10
 Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+  GLG+ +A     +G  +V A RS      + T      ++ + A G    
Sbjct: 6   KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE----PSET------QQQVEALGR--- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +  D+ +   ++ L + AV EFG IDI +NNAG  +      +F+ ++ +
Sbjct: 53  ------RFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRRAD-AEEFSEKDWD 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
            +++ NL      T+ A +    Q +GG I N+    S  GG   P    Y ++K  +  
Sbjct: 106 DVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVP---SYTASKHAVAG 162

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTD 238
           L   L  E     + V+  +PG + T+
Sbjct: 163 LTKLLANEWAAKGINVNAIAPGYMATN 189

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 4e-10
 Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 32/215 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V+ITG+++GLG+A+A + L  G  V+  SR+       +T+L E              
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK---ELTKLAEQ-----------YN 47

Query: 94  KNLVHAKVAGIACDVCEPADVQK-----LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 148
            NL        + D+ +  +++      LS+   +   SI + INNAG     KP+ +  
Sbjct: 48  SNLTF-----HSLDLQDVHELETNFNEILSSIQEDNVSSIHL-INNAGMVAPIKPIEKAE 101

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTK 206
           +EE+   V  NL+  ++ T   M+  +D      + N+    SG +  P    + Y S+K
Sbjct: 102 SEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINIS---SGAAKNPYFGWSAYCSSK 158

Query: 207 CGLRQLQASLFKESKRSKVGVHTAS--PGMVLTDL 239
            GL     ++  E +  +  V   +  PG++ T++
Sbjct: 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM 193

Length = 251

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 59.4 bits (144), Expect = 4e-10
 Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 32/210 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG   GLG+A+   F+  G RV V  +S+  +            + + AA G     
Sbjct: 8   VLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL------------QELEAAHG----- 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--- 152
                V G+  DV    D ++     V  FG ID  I NAG       L+   ++ I   
Sbjct: 51  ---DAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEA 107

Query: 153 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGGSSTPLTAVYGSTKCGL 209
            +++   N+ G +L  + A+  +    +G  IF +  AG    G     TA   +    +
Sbjct: 108 FDEVFHINVKGYLLAVKAALPALV-ASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLV 166

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           ++L   L        V V+  +PG + +DL
Sbjct: 167 KELAFEL-----APYVRVNGVAPGGMSSDL 191

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 59.4 bits (144), Expect = 5e-10
 Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 28/214 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKK 94
            ++TG++RG+G+ +A +   +G  V +  R+    +  T  E+E        A GG    
Sbjct: 6   ALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIE--------ARGG---- 53

Query: 95  NLVHAKVAGIACDVCEPADVQKL-SNFAVNEFGSIDIWINNA--GTNKGF----KPLLQF 147
                K   + CD  +  +V+ L    A  + G +DI +NNA            KP  + 
Sbjct: 54  -----KCIPVRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEE 108

Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
                + I +  L     C+  A  +M    K G I  +  + +GG        YG  K 
Sbjct: 109 PPTIWDDINNVGLRAHYACSVYAAPLMVKAGK-GLIVII--SSTGGLEYLFNVAYGVGKA 165

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 241
            + ++ A +  E K   V V +  PG V T+L+L
Sbjct: 166 AIDRMAADMAHELKPHGVAVVSLWPGFVRTELVL 199

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 5e-10
 Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 17/103 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG++ G+G+A A +   +G  V + +R+ E++   V E+         A GG   
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIR--------AKGG--- 420

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 136
                       CD+ + A V       + E G +D  +NNAG
Sbjct: 421 ------TAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAG 457

Length = 657

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 58.8 bits (143), Expect = 6e-10
 Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 23/152 (15%)

Query: 37  VITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++TG  RG+G  +AR    +G D  +      E +  T  EL      G           
Sbjct: 6   LVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA---LG----------- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEI 152
               +V     DV + +  + + + A   +G ID  +NNAG     +G   LL  T E  
Sbjct: 52  ---VEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRG--DLLDLTPESF 106

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIF 184
           +++++ NL G    T+   + M  QP+   + 
Sbjct: 107 DRVLAINLRGPFFLTQAVAKRMLAQPEPEELP 138

Length = 256

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 6e-10
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 31/206 (15%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG   GLG+  A     +G  +++ +          T  +E              + L
Sbjct: 19  IVTGGNTGLGQGYAVALAKAGADIIITTHG--------TNWDET-------------RRL 57

Query: 97  VHA---KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +     KV  +  D+ +P   +K+   A+ EFG IDI +NNAGT +   PLL++ +E+  
Sbjct: 58  IEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRR-APLLEYKDEDWN 116

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
            ++  NL      ++   +VM  Q   G I N+    S  GG   P    Y ++K G+  
Sbjct: 117 AVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSFQGGKFVP---AYTASKHGVAG 172

Query: 212 LQASLFKESKRSKVGVHTASPGMVLT 237
           L  +   E     + V+  +PG + T
Sbjct: 173 LTKAFANELAAYNIQVNAIAPGYIKT 198

Length = 258

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 58.2 bits (141), Expect = 9e-10
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 24/208 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +N++ITGS +G+G  LA      G  +++   ++E   + V +L +   EG+ A      
Sbjct: 10  KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ---EGIKA------ 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
               HA       +V    +V+        + G ID+ INNAG  +   P  +F  +E  
Sbjct: 61  ----HA----APFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRH-PFTEFPEQEWN 111

Query: 154 QIVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            +++ N     L ++   R M  R   K  +I +M       + TP    Y ++K  ++ 
Sbjct: 112 DVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITP----YAASKGAVKM 167

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L   +  E  R  + V+  +PG   T++
Sbjct: 168 LTRGMCVELARHNIQVNGIAPGYFKTEM 195

Length = 254

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 20/199 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+I G  + LG  +AR+    G + V    +S + +    E    +K    AAG      
Sbjct: 11  VLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVK----AAG------ 60

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQ 154
              AK      D+   A V+KL + A   FG  DI IN  G  K   KP+++ +  E ++
Sbjct: 61  ---AKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVG--KVLKKPIVEISEAEYDE 115

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           + + N   +    +EA R + D    G I  +  +   G+ TP  + Y  +K  +     
Sbjct: 116 MFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTS-LLGAFTPFYSAYAGSKAPVEHFTR 171

Query: 215 SLFKESKRSKVGVHTASPG 233
           +  KE     + V    PG
Sbjct: 172 AASKEFGARGISVTAVGPG 190

Length = 257

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 27/171 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG   G+G+AL   FL  G RV V  RS+E +        ++               
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDH--------------- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ- 154
                V  +  DV   AD Q+  +  V+ FG +D ++ NAG       L+    E ++  
Sbjct: 54  -----VLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTA 108

Query: 155 ---IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG--SGGSSTPLTA 200
              I + N+ G +L  + A+  ++    G  IF +  +    GG     TA
Sbjct: 109 FDEIFNVNVKGYLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTA 158

Length = 263

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 56.4 bits (136), Expect = 3e-09
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 20/206 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R +++TG++ G+G+  A  +   G  V++  R+ E +R     + E              
Sbjct: 5   RIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINE-------------- 50

Query: 94  KNLVHAKVAGIACDV--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                 +      D+  C   + Q+L+      +  +D  ++NAG      PL +   + 
Sbjct: 51  --EGGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQV 108

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            + +   N+  + + T+  + ++     G  +F     G  G +      Y  +K     
Sbjct: 109 WQDVXQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRAN--WGAYAVSKFATEG 166

Query: 212 LQASLFKESKRSKVGVHTASPGMVLT 237
           L   L  E ++  + V+  +PG   T
Sbjct: 167 LXQVLADEYQQRNLRVNCINPGGTRT 192

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 56.3 bits (136), Expect = 4e-09
 Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 27/205 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           V++TG+ RG+GKA     L  G  +V  A R   S       L                K
Sbjct: 6   VLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGS----AAHLVA--------------K 47

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                KV  +  DV +P  ++  +  A +    +D+ INNAG  K    L +   E ++Q
Sbjct: 48  YG--DKVVPLRLDVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQ 101

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            +  N+ G +   +    V++    G  I N++   S   + P    Y ++K     L  
Sbjct: 102 EMDVNVFGLLRLAQAFAPVLKANGGGA-IVNLNSVAS-LKNFPAMGTYSASKSAAYSLTQ 159

Query: 215 SLFKESKRSKVGVHTASPGMVLTDL 239
            L  E       V +  PG + T +
Sbjct: 160 GLRAELAAQGTLVLSVHPGPIDTRM 184

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 34/222 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG   GLG+AL   F+  G +V V  RS+E     V EL  +  +            
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK----VAELRADFGD------------ 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--- 152
                V G+  DV   AD ++     V  FG +D +I NAG       L+    E++   
Sbjct: 51  ----AVVGVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEA 106

Query: 153 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG---SGGSSTPLTAVYGSTKCG 208
            +++   N+ G IL  + A+  +    +G  IF +  AG    GG       +Y ++K  
Sbjct: 107 FDELFHINVKGYILGAKAALPALY-ATEGSVIFTVSNAGFYPGGGGP-----LYTASKHA 160

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 250
           +  L   L  E     + V+  +PG ++TDL    S  Q + 
Sbjct: 161 VVGLVKQLAYELA-PHIRVNGVAPGGMVTDLRGPASLGQGET 201

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 56.0 bits (136), Expect = 5e-09
 Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 33/209 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V +TG+ +G+G A+A  F+ +G +V+   ++          L +              
Sbjct: 9   KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQA---------FLTQE------------- 46

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A    DV + A V ++    + E G +D+ +N AG  +        ++E+ +
Sbjct: 47  ----DYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQ 101

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 211
           Q  + N  G+    R  M   R Q + G I  +   GS  +  P    A YG++K  L  
Sbjct: 102 QTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTV---GSNAAHVPRIGMAAYGASKAALTS 157

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLL 240
           L   +  E     V  +  SPG   TD+ 
Sbjct: 158 LAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186

Length = 252

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 41/219 (18%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++ITG+   +G AL +  L +G  V+ A    E++   +  L +  K             
Sbjct: 7   ILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFK------------- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-GTNKGF-KPLLQFTNEEIE 153
               K++ +  D+ +   +++  + +  ++G ID  +N A   NK + K     + ++  
Sbjct: 54  --SKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFN 111

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS--------------TPLT 199
           + +S +L  S L +++  +  + Q  GG++ N+       SS              T +T
Sbjct: 112 ENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNI-------SSIYGVVAPKFEIYEGTSMT 163

Query: 200 AV--YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 236
           +   Y + K G+  L   L K  K S + V+  SPG +L
Sbjct: 164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGIL 202

Length = 256

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 55.3 bits (134), Expect = 6e-09
 Identities = 52/211 (24%), Positives = 90/211 (42%), Gaps = 39/211 (18%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              +ITG++RG+G A+ARE L     +++  R +E +     EL                
Sbjct: 4   PTALITGASRGIGAAIARE-LAPTHTLLLGGRPAERLDELAAELPG-------------- 48

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                        D+ +P  +      AV + G +D+ ++NAG  + G  P+ + T +E 
Sbjct: 49  -------ATPFPVDLTDPEAIAA----AVEQLGRLDVLVHNAGVADLG--PVAESTVDEW 95

Query: 153 EQIVSTNLVGSILCTRE---AMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
              +  N+V     TR    A+R        GH+  ++ +G+G  + P    Y ++K  L
Sbjct: 96  RATLEVNVVAPAELTRLLLPALRAAH-----GHVVFIN-SGAGLRANPGWGSYAASKFAL 149

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           R L  +L +E +   V V +  PG   TD+ 
Sbjct: 150 RALADALREE-EPGNVRVTSVHPGRTDTDMQ 179

Length = 227

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.9 bits (135), Expect = 7e-09
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 23/187 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TG+  GLG+A A      G  VVV   +S        +  + L E + AAG    
Sbjct: 13  KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA------LDASDVLDE-IRAAGA--- 62

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   +A D+ + A   +L   AV   G +DI +NNAG  +  + L   ++EE +
Sbjct: 63  ------KAVAVAGDISQRATADELVATAV-GLGGLDIVVNNAGITRD-RMLFNMSDEEWD 114

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPK--GGHIFN--MDGAGSGGSSTPL-TAVYGSTKCG 208
            +++ +L G  L TR A    R + K  GG ++   ++ +   G   P+  A YG+ K G
Sbjct: 115 AVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAG 174

Query: 209 LRQLQAS 215
           +  L  S
Sbjct: 175 ITALTLS 181

Length = 306

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 55.7 bits (134), Expect = 7e-09
 Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 27/205 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSS 92
           +  ++TG   G+GK +  +FL +GD+VV A    E        E           A  + 
Sbjct: 2   KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETL 61

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
            K +V+A                      + + G ID+ +NNA        L     EE 
Sbjct: 62  VKFVVYA---------------------MLEKLGRIDVLVNNAARGSK-GILSSLLLEEW 99

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++I+S NL G    +R     +      G I N+  +     S P +  Y ++K GL  L
Sbjct: 100 DRILSVNLTGPYELSRYCRDELIKN--KGRIINI-ASTRAFQSEPDSEAYAASKGGLVAL 156

Query: 213 QASLFKESKRSKVGVHTASPGMVLT 237
             +L   S    + V+  SPG + T
Sbjct: 157 THAL-AMSLGPDIRVNCISPGWINT 180

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 7e-09
 Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 40/177 (22%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++ G+G+A A +   +G RV   SR+                     A  +    
Sbjct: 7   ALVTGASSGIGRATAEKLARAGYRVFGTSRN--------------------PARAAPI-- 44

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL----QFTNEE 151
                V  +  DV + A VQ   +  +   G ID+ +NNAG       L     + +  +
Sbjct: 45  ---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVG-----LAGAAEESSIAQ 96

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTK 206
            + +  TN+ G +  TR  +  MR Q   G I N+    S  G    P  A+Y ++K
Sbjct: 97  AQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINI---SSVLGFLPAPYMALYAASK 149

Length = 270

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 8e-09
 Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 29/199 (14%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG    +G A+AR  + +G RV +                        A  G++    
Sbjct: 10  IVTGGATLIGAAVARALVAAGARVAIVDID--------------------ADNGAAVAAS 49

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQ 154
           +  +   IA D+ + A +++     V  FG +DI +N A T  + G       +  +   
Sbjct: 50  LGERARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLDDGLAS----SRADWLA 105

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            +  NLV + +  + A   +     GG I N   + S   +     +Y ++K  +RQL  
Sbjct: 106 ALDVNLVSAAMLAQAAHPHLARG--GGAIVNF-TSISAKFAQTGRWLYPASKAAIRQLTR 162

Query: 215 SLFKESKRSKVGVHTASPG 233
           S+  +     + V++ SPG
Sbjct: 163 SMAMDLAPDGIRVNSVSPG 181

Length = 261

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 55.1 bits (133), Expect = 9e-09
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 26/157 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG +RGLG A+AR F   G RVVV    SE        L + L +  +A        
Sbjct: 8   VLVTGGSRGLGAAIARAFAREGARVVVNYHQSED---AAEALADELGDRAIA-------- 56

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIE- 153
                   +  DV +   VQ +   A   FG  I   +NNA  +  F    +   ++I  
Sbjct: 57  --------LQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITW 108

Query: 154 ----QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
               Q +  ++ G++   + A+  MR+Q   G I N+
Sbjct: 109 EDFQQQLEGSVKGALNTIQAALPGMREQ-GFGRIINI 144

Length = 253

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.8 bits (132), Expect = 1e-08
 Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 21/204 (10%)

Query: 37  VITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTV-TELEEN--LKEGMMAAGGS 91
           V+TG +R  G+G A+ +E   +G  +     ++    M    + +E   L+E ++  G  
Sbjct: 10  VVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG-- 67

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFTN 149
                   KV+ +  D+ +    ++L N    + G   I +NNA   TN  F  L   T 
Sbjct: 68  -------VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNL---TA 117

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           EE+++    N+  + L + +  R   D+  GG I NM  +G           Y +TK  +
Sbjct: 118 EELDKHYMVNVRATTLLSSQFAR-GFDKKSGGRIINMT-SGQFQGPMVGELAYAATKGAI 175

Query: 210 RQLQASLFKESKRSKVGVHTASPG 233
             L +SL  E     + V+  +PG
Sbjct: 176 DALTSSLAAEVAHLGITVNAINPG 199

Length = 256

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 25/205 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG T G+G   AR+FL  G RV +  R   S+     EL E+               
Sbjct: 9   ALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGES--------------- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   I  D  + A  + L+      FG +D    NAG  K F PL  +     ++ 
Sbjct: 54  -----ALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRS 107

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            +TN+ G     +  + ++        I  ++G+ +     P ++VY ++K  L  L  +
Sbjct: 108 FNTNVKGPYFLIQALLPLLA---NPASIV-LNGSINAHIGMPNSSVYAASKAALLSLAKT 163

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L  E     + V+  SPG V T L 
Sbjct: 164 LSGELLPRGIRVNAVSPGPVQTPLY 188

Length = 249

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 23/201 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +NVV+ G T G+   +A+ F  +G  V VASRS E V   V +L++              
Sbjct: 10  KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-------------- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEI 152
                 +  G++ DV + A V+       +EFG ID+ ++ A  N  F  P    +    
Sbjct: 56  ---AGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN--FPAPAAGMSANGF 110

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + +V  +L+G+    + A  ++R    G  I  +  A       P+ A   + K G+  L
Sbjct: 111 KTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQIS-APQAFVPMPMQAHVCAAKAGVDML 167

Query: 213 QASLFKESKRSKVGVHTASPG 233
             +L  E     + V++  PG
Sbjct: 168 TRTLALEWGPEGIRVNSIVPG 188

Length = 264

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSS 92
           R V++TG+  G+G+A A  F   G RVVV           +     + + + ++AAGG +
Sbjct: 7   RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEA 66

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
             N           D+ +      L + AV  FG +D+ +NNAG  +  + +   + EE 
Sbjct: 67  VAN---------GDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRD-RMIANMSEEEW 116

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGH-----IFNM-DGAGSGGSSTPLTAVYGSTK 206
           + +++ +L G     R A    R + K G      I N   GAG  GS       Y + K
Sbjct: 117 DAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS--VGQGNYSAAK 174

Query: 207 CGLRQLQASLFKESKRSKVGVHTASP 232
            G+  L      E  R  V V+  +P
Sbjct: 175 AGIAALTLVAAAELGRYGVTVNAIAP 200

Length = 286

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 56/217 (25%), Positives = 84/217 (38%), Gaps = 21/217 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSS 92
           R  +ITG+  G+G+A A  F   G  + +      E     V +L +       A G   
Sbjct: 56  RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-------AEG--- 105

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  K   +  D+ + A  ++L   AV E G +DI +N AG     K +   T E+ 
Sbjct: 106 ------RKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQF 159

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +    TN+       + A+  +   P G  I N     S   S  L   Y STK  +   
Sbjct: 160 DATFKTNVYAMFWLCKAAIPHL---PPGASIINTGSIQSYQPSPTLLD-YASTKAAIVAF 215

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 249
             +L K+     + V+  +PG V T L  SG     K
Sbjct: 216 TKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEK 252

Length = 300

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 26/203 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++ G+GKA AR     G  V  A+R  +  +M                      +
Sbjct: 6   ALVTGASSGIGKATARRLAAQGYTVYGAARRVD--KME---------------------D 42

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
           L    V  ++ DV + A ++   +  + E G ID+ +NNAG    +  +     +E  + 
Sbjct: 43  LASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQ 101

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              NL G+   T+  +  MR Q + G I N+   G G   TPL A Y +TK  L     +
Sbjct: 102 FEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSMG-GKIYTPLGAWYHATKFALEGFSDA 159

Query: 216 LFKESKRSKVGVHTASPGMVLTD 238
           L  E     + V    PG + T+
Sbjct: 160 LRLEVAPFGIDVVVIEPGGIKTE 182

Length = 273

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 53.2 bits (128), Expect = 4e-08
 Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 34/164 (20%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMM 86
           + + ITG++RG+GKA+A +    G  VV+A++++E       ++     E+E        
Sbjct: 4   KTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIE-------- 55

Query: 87  AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG----TNKGFK 142
           AAGG         K      D+ +   V+     AV +FG IDI +NNA     T     
Sbjct: 56  AAGG---------KALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDT 106

Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           P+ ++     + ++  N  G+ LC++  +  ++ + K  HI N+
Sbjct: 107 PMKRY-----DLMMGVNTRGTYLCSKACLPYLK-KSKNPHILNL 144

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 53.0 bits (127), Expect = 5e-08
 Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 28/227 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++ G+G+ +AR     G  V +     E +     EL E +K  +  A  S +
Sbjct: 7   RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVK--IFPANLSDR 64

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                              +V+ L   A  +   +DI +NNAG T  G    ++ ++E+ 
Sbjct: 65  ------------------DEVKALGQKAEADLEGVDILVNNAGITKDGL--FVRMSDEDW 104

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + ++  NL  +   TRE    M  + + G I N+     G +  P  A Y ++K G+   
Sbjct: 105 DSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITSV-VGVTGNPGQANYCASKAGMIGF 162

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
             SL +E     V V+  +PG + + +      + +KQ   I+  +P
Sbjct: 163 SKSLAQEIATRNVTVNCVAPGFIESAMT---GKLNDKQKEAIMGAIP 206

Length = 245

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 7e-08
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 15/103 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  V+TG + G+G A     L +G  V +  R  E +      L E              
Sbjct: 9   RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP----------- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 136
                A++    CDV + ADV   +      FG +D+ +NNAG
Sbjct: 58  ----GARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 45/209 (21%), Positives = 77/209 (36%), Gaps = 43/209 (20%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +I G+T G+G+ALAR     G R++++ R +                            
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDA---------------------------- 32

Query: 96  LVHAKVAGIACDVCEPADVQKLSN-----FAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
                +AG+A +V   A    ++          E G +D+ +  AG   G KPL +    
Sbjct: 33  ---GALAGLAAEVGALARPADVAAELEVWALAQELGPLDLLVYAAGAILG-KPLARTKPA 88

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
              +I+  NL G+ L  + A+ ++     G  +  + GA       P  + Y + K  L 
Sbjct: 89  AWRRILDANLTGAALVLKHALALL---AAGARLVFL-GAYPELVMLPGLSAYAAAKAALE 144

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
                  KE +   + +    P  V T L
Sbjct: 145 AYVEVARKEVR--GLRLTLVRPPAVDTGL 171

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 52.1 bits (125), Expect = 1e-07
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 18/102 (17%)

Query: 35  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           NV++T S+RG+G  +ARE L  G RVV++SR+ E++   + EL+E               
Sbjct: 2   NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE--------------- 46

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 136
              + +V  +  D+ +  D++ L   A    G ID  + NAG
Sbjct: 47  ---YGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAG 85

Length = 259

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGS+RG+G   A+    +G  VVV  R               +   + AAGG   
Sbjct: 7   KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA-------PRANKVVAEIEAAGG--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 135
                 + + +  D+ +   V  L + A  EFG +D  + NA
Sbjct: 57  ------RASAVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 52.2 bits (125), Expect = 1e-07
 Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 28/210 (13%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG T G+GK  A +    G  +V+ +R+ + ++     ++             SK + 
Sbjct: 57  LVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQ-------------SKYSK 103

Query: 97  VHAK--VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-IE 153
              K  V   + D+ E   V+++      E   + + INN G +  +       +EE ++
Sbjct: 104 TQIKTVVVDFSGDIDE--GVKRIKETI--EGLDVGVLINNVGVSYPYARFFHEVDEELLK 159

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS----STPLTAVYGSTKCGL 209
            ++  N+ G+   T+  +  M  + KG  I N+   GSG +    S PL AVY +TK  +
Sbjct: 160 NLIKVNVEGTTKVTQAVLPGMLKRKKGA-IINI---GSGAAIVIPSDPLYAVYAATKAYI 215

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
            Q    L+ E K+S + V    P  V T +
Sbjct: 216 DQFSRCLYVEYKKSGIDVQCQVPLYVATKM 245

Length = 320

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 46/229 (20%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVA---SRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           ++TG++RG+G+A+A    L+ D  +VA    R+ ++   T+ E+E N        GG  K
Sbjct: 10  LVTGASRGIGRAIAMR--LANDGALVAIHYGRNKQAADETIREIESN--------GG--K 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQF 147
             L+ A +  I         V+KL     NE         IDI +NNAG   G +  ++ 
Sbjct: 58  AFLIEADLNSI-------DGVKKLVEQLKNELQIRVGTSEIDILVNNAGI--GTQGTIEN 108

Query: 148 TNEEI-EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVY 202
           T EEI ++I++ N+       ++ + ++R +   G + N+  A    G  GS       Y
Sbjct: 109 TTEEIFDEIMAVNIKAPFFLIQQTLPLLRAE---GRVINISSAEVRLGFTGS-----IAY 160

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQN 248
           G +K  L  +   L K      + V+T  PG   TD+   LL    I+N
Sbjct: 161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRN 209

Length = 254

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 49/219 (22%), Positives = 80/219 (36%), Gaps = 56/219 (25%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKK 94
            +ITG  R +G A+AR    +G RV +    S +       EL                 
Sbjct: 9   ALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL----------------- 51

Query: 95  NLVHA-KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEE 151
           N +     A +  D+ +P  + +L    V  FG +D  +NNA +   F P  L   T  +
Sbjct: 52  NALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASS---FYPTPLGSITEAQ 108

Query: 152 IEQIVSTNLVGSILCTREAMRVMR--------------DQPKGGHIFNMDGAGSGGSSTP 197
            + + ++NL      ++ A   +R              ++P  G+               
Sbjct: 109 WDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYP-------------- 154

Query: 198 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 236
              VY + K  L  L  SL  E    +V V+  +PG +L
Sbjct: 155 ---VYCAAKAALEMLTRSLALELA-PEVRVNAVAPGAIL 189

Length = 249

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 48/207 (23%), Positives = 80/207 (38%), Gaps = 22/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TGS++G+G ALA     +G  V++  R    +      L+         A   + 
Sbjct: 11  RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD 70

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEI 152
            + V A +                      E G IDI +NNAG    F+ PL  F  +  
Sbjct: 71  HDAVRAAIDAFEA-----------------EIGPIDILVNNAGMQ--FRTPLEDFPADAF 111

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           E+++ TN+       +   R M  +   G I N+    S   + P  A Y +TK  +  L
Sbjct: 112 ERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASVQS-ALARPGIAPYTATKGAVGNL 169

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
              +  +  +  +  +  +PG   T L
Sbjct: 170 TKGMATDWAKHGLQCNAIAPGYFDTPL 196

Length = 255

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 30/210 (14%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           P  V ITG++ G+G+ALARE+   G  + + +R +++++     L +             
Sbjct: 2   PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK------------- 48

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                 A+V+  A DV +   +   +   +   G  D+ I NAG + G    L    E++
Sbjct: 49  -----AARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVG---TLTEEREDL 100

Query: 153 E---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKC 207
               +++ TN  G +   +  +  MR   +G     + G  S  G    P    Y ++K 
Sbjct: 101 AVFREVMDTNYFGMVATFQPFIAPMRAARRG----TLVGIASVAGVRGLPGAGAYSASKA 156

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLT 237
              +   SL  E + + V V T +PG + T
Sbjct: 157 AAIKYLESLRVELRPAGVRVVTIAPGYIRT 186

Length = 257

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 21/202 (10%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           +TG+  G+G+ +A     +G  V     R+ + +  T   +E        AAG  +    
Sbjct: 13  VTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIE--------AAGRRA---- 60

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                  IA DV   AD++        E G++ + +N AG      P  +   E+ + ++
Sbjct: 61  -----IQIAADVTSKADLRAAVARTEAELGALTLAVNAAGI-ANANPAEEMEEEQWQTVM 114

Query: 157 STNLVGSIL-CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
             NL G  L C  EA R M +   G  +     +G   +   L A Y ++K G+  L  S
Sbjct: 115 DINLTGVFLSCQAEA-RAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKS 173

Query: 216 LFKESKRSKVGVHTASPGMVLT 237
           L  E     + V++ SPG   T
Sbjct: 174 LAMEWVGRGIRVNSISPGYTAT 195

Length = 254

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 50.9 bits (122), Expect = 2e-07
 Identities = 50/208 (24%), Positives = 81/208 (38%), Gaps = 34/208 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +IT + +G+G+A+A  F   G  V+    +           EE LKE  +  G      
Sbjct: 5   ALITAAAQGIGRAIALAFAREGANVIATDIN-----------EEKLKE--LERGPG---- 47

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP---LLQFTNEEI 152
            +  +V     DV +   V  L      E G ID+  N AG    F     +L   +++ 
Sbjct: 48  -ITTRVL----DVTDKEQVAAL----AKEEGRIDVLFNCAG----FVHHGSILDCEDDDW 94

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +  ++ N+    L  +  +  M  + K G I NM    S     P   VY +TK  +  L
Sbjct: 95  DFAMNLNVRSMYLMIKAVLPKMLAR-KDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGL 153

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             S+  +  +  +  +   PG V T  L
Sbjct: 154 TKSVAADFAQQGIRCNAICPGTVDTPSL 181

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 39/218 (17%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG   G+GK +A   + +G  V++  R+ + +     E+E       +   G+  
Sbjct: 8   RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEA------LKGAGA-- 59

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              V  + A    DV +   V +  + A    G +   ++ AG ++   P+ Q  ++   
Sbjct: 60  ---VRYEPA----DVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWR 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----------Y 202
           + V  N+ G++   + A R +               G GGS   ++++           Y
Sbjct: 113 RTVDLNVNGTMYVLKHAARELV-------------RGGGGSFVGISSIAASNTHRWFGAY 159

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           G TK  +  L      E   S V V++  PG++ TDL+
Sbjct: 160 GVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLV 197

Length = 276

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 46/217 (21%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA----SRSSESVRMTVTELEENLKEGMMAAGGS 91
            +ITG   G+G+A+A  F   G  + +        +   +  V       KEG       
Sbjct: 49  ALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE------KEG------- 95

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
             K L+      I  DV + A  +      V E G +DI +NNA      + L   T E+
Sbjct: 96  -VKCLL------IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQ 148

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTK 206
           +++   TN+      T+ A+  ++   +G  I N       GS T          Y +TK
Sbjct: 149 LDKTFKTNIYSYFHMTKAALPHLK---QGSAIINT------GSITGYEGNETLIDYSATK 199

Query: 207 CGL----RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             +    R L  SL ++  R    V+  +PG + T L
Sbjct: 200 GAIHAFTRSLAQSLVQKGIR----VNAVAPGPIWTPL 232

Length = 290

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 31/211 (14%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV 97
           +TG   G+G A+ +     G RV      +E       E  E   +   A G        
Sbjct: 5   VTGGMGGIGTAICQRLAKDGYRVAANCGPNE-------ERAEAWLQEQGALG-------- 49

Query: 98  HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQI 155
                 +  DV      +        E G ID+ +NNAG   +  FK   + T E+   +
Sbjct: 50  -FDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFK---KMTYEQWSAV 105

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQ 211
           + TNL      T+  +  MR++   G I N+       G  G +      Y + K G+  
Sbjct: 106 IDTNLNSVFNVTQPVIDGMRER-GWGRIINISSVNGQKGQFGQTN-----YSAAKAGMIG 159

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
              +L +E     V V+T SPG + TD++++
Sbjct: 160 FTKALAQEGATKGVTVNTISPGYIATDMVMA 190

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 7e-07
 Identities = 48/240 (20%), Positives = 85/240 (35%), Gaps = 46/240 (19%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVAS-----------RSSESVRMTVTELEENLKEG 84
           V+ITG   G G  LA++    G  V+              R   S R+   +L       
Sbjct: 3   VLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELRRVCSDRLRTLQL------- 55

Query: 85  MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW--INNAGTNKGFK 142
                                 DV +P  +++ + +     G   +W  +NNAG      
Sbjct: 56  ----------------------DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGG 93

Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 202
                  ++  + +  NL G++  T+  + ++R + KG  + N+  +  G    P    Y
Sbjct: 94  DEELLPMDDYRKCMEVNLFGTVEVTKAFLPLLR-RAKG-RVVNV-SSMGGRVPFPAGGAY 150

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 262
            ++K  +     SL +E +   V V    PG   T +  +    + KQ   +   LP  V
Sbjct: 151 CASKAAVEAFSDSLRRELQPWGVKVSIIEPGNFKTGITGNSELWE-KQAKKLWERLPPEV 209

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 49.6 bits (118), Expect = 9e-07
 Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 19/216 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG   G+G+A A  +   G  V ++    E       E  +++K+ +   G    
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE------EDAQDVKKIIEECG---- 99

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   +  D+ +    + L + A    G +DI    AG       +   T+E+ +
Sbjct: 100 -----RKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQ 154

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +  + N+      T+EA+ ++   PKG  I       +   S P    Y +TK  +    
Sbjct: 155 KTFAINVFALFWLTQEAIPLL---PKGASIITTSSIQAYQPS-PHLLDYAATKAAILNYS 210

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 249
             L K+     + V+  +PG + T L +SG   Q+K
Sbjct: 211 RGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDK 246

Length = 294

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 49/210 (23%), Positives = 86/210 (40%), Gaps = 35/210 (16%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG +RGLG ALA + L  G  V+  +RS                  + AA G      
Sbjct: 5   IVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--------------SLAAAAG------ 44

Query: 97  VHAKVAGIACDVCEPADV-QKLSNFAVNEFG---SIDIWINNAGTNKGFKPLLQFTNEEI 152
              ++A +  D+ + A     L+   +  F    S  + INNAGT +   PL       I
Sbjct: 45  --ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAI 102

Query: 153 EQIVSTNLVGSILCT-REAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGL 209
            + V  N+   ++ T   A        +   I ++    SG +       +VY +TK  L
Sbjct: 103 ARAVGLNVAAPLMLTAALAQAASDAAER--RILHIS---SGAARNAYAGWSVYCATKAAL 157

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
                ++  ++ R+ + + + +PG+V T +
Sbjct: 158 DHHARAVALDANRA-LRIVSLAPGVVDTGM 186

Length = 243

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 48.7 bits (116), Expect = 1e-06
 Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 31/207 (14%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG   GLG+ +A     +G  +V                      G+  A     +  
Sbjct: 12  IITGCNTGLGQGMAIGLAKAGADIV----------------------GVGVAEAPETQAQ 49

Query: 97  VHA---KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           V A   K   I  D+ +  D+  + + AV   G IDI INNAG  +  + LL+F N++ +
Sbjct: 50  VEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR-QDLLEFGNKDWD 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
            +++ N       ++   +    Q  GG I N+    S  GG   P    Y ++K  +  
Sbjct: 109 DVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVP---SYTASKSAVMG 165

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTD 238
           L  +L  E  +  + V+  +PG + TD
Sbjct: 166 LTRALATELSQYNINVNAIAPGYMATD 192

Length = 251

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 48.2 bits (115), Expect = 2e-06
 Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 34/211 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++ G++ G+G A A E   +G  V + +R        V + EE L + + A GG + 
Sbjct: 11  RPALVAGASSGIGAATAIELAAAGFPVALGARR-------VEKCEE-LVDKIRADGGEA- 61

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                        DV +P  V+     A    G I++ ++ AG +  F  L + + E+ E
Sbjct: 62  --------VAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAG-DTYFGKLHEISTEQFE 112

Query: 154 QIVSTNLVGSILCTREAMRV---MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL- 209
             V  +LVG+    R A  V   M ++ +G  IF   G+       P    YG+ K GL 
Sbjct: 113 SQVQIHLVGA---NRLATAVLPGMIERRRGDLIFV--GSDVALRQRPHMGAYGAAKAGLE 167

Query: 210 ---RQLQASLFKESKRSKVGVHTASPGMVLT 237
                LQ  L     R+ + VH   PG  LT
Sbjct: 168 AMVTNLQMELEGTGVRASI-VH---PGPTLT 194

Length = 274

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 19/211 (9%)

Query: 33  PRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
            +  ++TG++R  G+G A+ R     G  +     S     M     ++   E ++    
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDK---EPVLLKEE 61

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA--GTNKGFKPLLQFT 148
                    +   +  D+ +P    ++        G   I INNA   T+   + L   T
Sbjct: 62  IESYG---VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEEL---T 115

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTK 206
            E++++  + N+  ++L +    +   D   GG I N+    SG S  P+     Y +TK
Sbjct: 116 AEQLDKHYAVNVRATMLLSSAFAKQY-DGKAGGRIINLT---SGQSLGPMPDELAYAATK 171

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLT 237
             +     SL  E     + V+  +PG   T
Sbjct: 172 GAIEAFTKSLAPELAEKGITVNAVNPGPTDT 202

Length = 256

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 48.5 bits (116), Expect = 3e-06
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 24/124 (19%)

Query: 37  VITGSTRGLGKALAREFL-LSGDRVVVASRSS-----ESVRMTVTELEENLKEGMMAAGG 90
           ++TG   G+G+ALAR      G R+V+  RS      E    T+  LE      +     
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY---- 264

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
                        I+ DV + A V++L       +G+ID  I+ AG  +    L Q T E
Sbjct: 265 -------------ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRD-ALLAQKTAE 310

Query: 151 EIEQ 154
           + E 
Sbjct: 311 DFEA 314

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 47/207 (22%), Positives = 83/207 (40%), Gaps = 23/207 (11%)

Query: 38  ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT-ELEENLKEGMMAAGGSSKKNL 96
           ITG+  GLG+A+AR     G +V +   +  +       E+     EG+  A        
Sbjct: 4   ITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFA-------- 55

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                     DV + A  Q L   A +  G + + +NNAG    F  + Q   +E  +++
Sbjct: 56  -------AVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVG-SFGAIEQIELDEWRRVM 107

Query: 157 STNLVGSILCTREAMRVMRD-QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + N+    L  + A+  +R  QP    I N+    +   + P    Y ++K  +  L  S
Sbjct: 108 AINVESIFLGCKHALPYLRASQP--ASIVNISSV-AAFKAEPDYTAYNASKAAVASLTKS 164

Query: 216 LFKESKRSKVGVHTAS--PGMVLTDLL 240
           +  +  R  + V   S  P  + T ++
Sbjct: 165 IALDCARRGLDVRCNSIHPTFIRTGIV 191

Length = 251

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 47.5 bits (113), Expect = 4e-06
 Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 23/132 (17%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           + ITGS+ GLG A AR  L  G  VV+ +RS +                   A    K  
Sbjct: 10  IFITGSSDGLGLAAARTLLHQGHEVVLHARSQKR---------------AADA----KAA 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              A    I  D+   A+ +KL++  VN  G  D  I+NAG   G  P  +  +  I  +
Sbjct: 51  CPGAAGVLIG-DLSSLAETRKLAD-QVNAIGRFDAVIHNAGILSG--PNRKTPDTGIPAM 106

Query: 156 VSTNLVGSILCT 167
           V+ N++   + T
Sbjct: 107 VAVNVLAPYVLT 118

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 46.6 bits (110), Expect = 6e-06
 Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 43/258 (16%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVV--ASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           ++TG++RG+G+A+A+     G  V +   +R  E+   TV E++ N        GGS+  
Sbjct: 8   LVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEA-EETVYEIQSN--------GGSA-- 56

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS------IDIWINNAGTNKGFKPLLQFT 148
                    I  ++     V+ L +   NE  +       DI INNAG   G    ++ T
Sbjct: 57  -------FSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG--AFIEET 107

Query: 149 NEE-IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
            E+  +++VS N        ++A+  +RD  +   I N+  A +   S P    Y  TK 
Sbjct: 108 TEQFFDRMVSVNAKAPFFIIQQALSRLRDNSR---IINISSAAT-RISLPDFIAYSMTKG 163

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL---LLS-------GSTIQNKQMFNIICE 257
            +  +  +L K+     + V+   PG + TD+   LLS        +TI        + +
Sbjct: 164 AINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVED 223

Query: 258 LPETVARTLVPRIRVVKG 275
           + +T A    P  R V G
Sbjct: 224 IADTAAFLASPDSRWVTG 241

Length = 252

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 46.7 bits (111), Expect = 7e-06
 Identities = 57/220 (25%), Positives = 90/220 (40%), Gaps = 36/220 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG+  G+GK  ARE    G RV++A R              ++ +   AA    +
Sbjct: 2   KTVIITGANTGIGKETARELARRGARVIMACR--------------DMAKCEEAAAEIRR 47

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFA---VNEFGSIDIWINNAG--------TNKGFK 142
             L H     +     + A ++ +  FA   + E   +D+ INNAG        T  GF+
Sbjct: 48  DTLNHE----VIVRHLDLASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFE 103

Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---KGGHIFNMDGAGSGGSSTPLT 199
             +QF    +   + TNL+  +L      R++       K G I N D   S  S     
Sbjct: 104 --MQFGVNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKI-NFDDLNSEKSYNTGF 160

Query: 200 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           A Y  +K         L +  + + V V+   PG+V T+L
Sbjct: 161 A-YCQSKLANVLFTRELARRLQGTGVTVNALHPGVVRTEL 199

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 46.3 bits (110), Expect = 7e-06
 Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 35/209 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++ G +RG+G A+ R F+  G  V                             GS  
Sbjct: 7   KKVLVLGGSRGIGAAIVRRFVTDGANVR------------------------FTYAGSKD 42

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+  G      + AD   + +  V + G++DI + NAG       L    + +I+
Sbjct: 43  AAERLAQETGATAVQTDSADRDAVIDV-VRKSGALDILVVNAGIAVFGDALELDAD-DID 100

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-GGSSTPLT--AVYGSTKCGLR 210
           ++   N+      + EA R M   P+GG I  +   GS  G   P+   A Y ++K  L+
Sbjct: 101 RLFKINIHAPYHASVEAARQM---PEGGRIIII---GSVNGDRMPVAGMAAYAASKSALQ 154

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
            +   L ++     + ++   PG + TD 
Sbjct: 155 GMARGLARDFGPRGITINVVQPGPIDTDA 183

Length = 237

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 46.2 bits (110), Expect = 8e-06
 Identities = 53/204 (25%), Positives = 76/204 (37%), Gaps = 33/204 (16%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++ G + G+G ALAR F   G RV +ASRS + +      L                   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG----------------- 43

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSID-IWINNAGTNKGFKPLLQFTNEEIEQI 155
             A V   A D+ + A V     FA  E G  D + I  A T  G  P+        +  
Sbjct: 44  -GAPVRTAALDITDEAAVDAF--FA--EAGPFDHVVITAADTPGG--PVRALPLAAAQAA 96

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + +   G+    R A         GG +  + G  +   S     + G+    L  L   
Sbjct: 97  MDSKFWGAYRVARAA-----RIAPGGSLTFVSGFAAVRPS-ASGVLQGAINAALEALARG 150

Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E   + V V+T SPG+V T L
Sbjct: 151 LALE--LAPVRVNTVSPGLVDTPL 172

Length = 230

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 27/106 (25%), Positives = 42/106 (39%), Gaps = 21/106 (19%)

Query: 31  AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
           AG   +V TG+ RG+G A+A      G  VV          + V    E L       GG
Sbjct: 209 AGKVALV-TGAARGIGAAIAEVLARDGAHVVC---------LDVPAAGEALAAVANRVGG 258

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 136
           ++           +A D+  P    +++       G +DI ++NAG
Sbjct: 259 TA-----------LALDITAPDAPARIAEHLAERHGGLDIVVHNAG 293

Length = 450

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 46/221 (20%), Positives = 71/221 (32%), Gaps = 28/221 (12%)

Query: 40  GSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA 99
                +  A+A+     G  VV+ +         V EL + L                 A
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELP----------------A 46

Query: 100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWIN---NAGTNKGFKPLLQFTNEEIEQIV 156
            V  I  DV    D+ +L      + G ID  ++    +   +  KP L  + E   + +
Sbjct: 47  DV--IPLDVTSDEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKAL 104

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             +    I   + A  +M    +GG I  +    +     P     G  K  L  L   L
Sbjct: 105 DISAYSFISLAKAAKPLM---NEGGSIVALSYIAAER-VFPGYGGMGVAKAALESLARYL 160

Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE 257
             E  R  + V+T S G   T    +GS I          E
Sbjct: 161 AYELGRKGIRVNTISAGPTKT---TAGSGIGGFDKMVEYAE 198

Length = 239

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 45.0 bits (106), Expect = 2e-05
 Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 6/136 (4%)

Query: 124 EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 183
           E G ID+ +NNAG  +      + T E+   ++ TNL      T++ +  M ++   G I
Sbjct: 78  EVGEIDVLVNNAGITRDVV-FRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRI 135

Query: 184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
            N+            T  Y + K G+     SL +E     V V+T SPG + TD++   
Sbjct: 136 INISSVNGQKGQFGQTN-YSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV--- 191

Query: 244 STIQNKQMFNIICELP 259
             I+   +  I+  +P
Sbjct: 192 KAIRPDVLEKIVATIP 207

Length = 246

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 44.9 bits (106), Expect = 3e-05
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 31/216 (14%)

Query: 37  VITGSTRGLGKALAREFLLS----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           ++TG++RG G+ +A+E        G  +V+++R+ E++R    E+            G+ 
Sbjct: 4   LVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI------------GAE 51

Query: 93  KKNLVHAKVAGIACDVCEPADVQKL-----SNFAVNEFGSIDIWINNAGT----NKGFKP 143
           +  L    V  ++ D+   A +++L               + + INNAGT    +KGF  
Sbjct: 52  RSGLR---VVRVSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGDVSKGFVD 107

Query: 144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYG 203
           L   T   ++   + NL   +  T   ++  +D P          +          A+Y 
Sbjct: 108 LSDSTQ--VQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYC 165

Query: 204 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           + K     L   L  E K   V V   +PG++ TD+
Sbjct: 166 AGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDM 201

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 28/209 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEG---MMAAGG 90
             V+ITG + G+G  LA    L+ D          S R  V     +LK+      AAG 
Sbjct: 1   TVVLITGCSSGIGLHLA--VRLASD---------PSKRFKVYATMRDLKKKGRLWEAAGA 49

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFT 148
            +   L   ++     DVC+   V      AV       +D+ + NAG      PL   +
Sbjct: 50  LAGGTLETLQL-----DVCDSKSVAA----AVERVTERHVDVLVCNAGVGL-LGPLEALS 99

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            + +  +   N+ G++   +  +  M+ +   G I      G G    P   VY ++K  
Sbjct: 100 EDAMASVFDVNVFGTVRMLQAFLPDMKRR-GSGRILVTSSVG-GLQGLPFNDVYCASKFA 157

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLT 237
           L  L  SL  +     V +     G V T
Sbjct: 158 LEGLCESLAVQLLPFNVHLSLIECGPVHT 186

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 22/132 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDR-VVVASRS---SESVRMTVTELEENLKEGMMAAGGS 91
            +ITG   GLG+ALAR     G R +V+ SRS   +      + ELE             
Sbjct: 3   YLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAG---------- 52

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                  A+V  +ACDV +   +  +        G +   I+ AG       L   T E 
Sbjct: 53  -------ARVTVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLD-DGVLASLTPER 104

Query: 152 IEQIVSTNLVGS 163
              +++    G+
Sbjct: 105 FAAVLAPKAAGA 116

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 43.4 bits (102), Expect = 6e-05
 Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 23/183 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++TG+++GLG+ +A+ +  +G  V++ +R  + +        E + + ++ AG    
Sbjct: 7   KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL--------EKVYDAIVEAG---- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVN---EF-GSIDIWINNAGTNKGFKPLLQFTN 149
               H +   I  D+    + ++   FA        G +D  ++ AG      PL   T 
Sbjct: 55  ----HPEPFAIRFDLMSAEE-KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTV 109

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
            E       N V  +  TR    +++  P    IF   G   G +       +G++K  L
Sbjct: 110 AEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFV--GESHGETPKAYWGGFGASKAAL 167

Query: 210 RQL 212
             L
Sbjct: 168 NYL 170

Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 43.3 bits (102), Expect = 8e-05
 Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 25/204 (12%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           V+TG   GLG+ +A         + +A    + V + + E  E + E + A G       
Sbjct: 14  VVTGCDTGLGQGMA---------LGLAEAGCDIVGINIVEPTETI-EQVTALG------- 56

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +   +  D+ +   +  L   AV EFG IDI +NNAG  +  +  ++F+ ++ + ++
Sbjct: 57  --RRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR-EDAIEFSEKDWDDVM 113

Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQA 214
           + N+      ++ A +    Q  GG I N+    S  GG   P    Y ++K G+  +  
Sbjct: 114 NLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVP---SYTASKSGVMGVTR 170

Query: 215 SLFKESKRSKVGVHTASPGMVLTD 238
            +  E  +  + V+  +PG + T+
Sbjct: 171 LMANEWAKHNINVNAIAPGYMATN 194

Length = 253

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 46/225 (20%), Positives = 71/225 (31%), Gaps = 59/225 (26%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            R  +I G++RGLG  L    L  G +V    R  +         +  L+          
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ--------DTALQA--------- 43

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAG-TNKGFKPLLQFTNE 150
                   + G+  +  +  D   L        G   D+   NAG +    +     T  
Sbjct: 44  --------LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAA 95

Query: 151 EIEQIVSTNLVGSI-LCTREAMRVMRDQ---------------PKGGHIFNMDGAGSGGS 194
           EI Q+  TN +  I L  R   +V   Q               P GG +           
Sbjct: 96  EIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEM----------- 144

Query: 195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
                 +Y ++K  L  +  S   E     + V +  PG V TD+
Sbjct: 145 -----PLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184

Length = 225

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 44/206 (21%), Positives = 83/206 (40%), Gaps = 28/206 (13%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            + ++ITG+  G G+ +A      G  V+   + +  V    T L           G + 
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQV----TALRAEAAR----RGLA- 52

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                   +     D+ +  D  + + +       +D+ +NNAG  +    ++    E +
Sbjct: 53  --------LRVEKLDLTDAIDRAQAAEW------DVDVLLNNAGIGEA-GAVVDIPVELV 97

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQ 211
            ++  TN+ G +  T+  +R M  + KG  +F    +   G  T P T  Y ++K  L  
Sbjct: 98  RELFETNVFGPLELTQGFVRKMVARGKGKVVFT---SSMAGLITGPFTGAYCASKHALEA 154

Query: 212 LQASLFKESKRSKVGVHTASPGMVLT 237
           +  ++  E K   + V T +PG  LT
Sbjct: 155 IAEAMHAELKPFGIQVATVNPGPYLT 180

Length = 257

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 31/126 (24%), Positives = 50/126 (39%), Gaps = 20/126 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG   G+G A++      G   V+  RS+        E  E L+    A    ++  
Sbjct: 10  VIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-----EFAEELR----ALQPRAEF- 59

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  D+ + A  +      V +FG ID  +NNAG N G    L+   E     
Sbjct: 60  --------VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDGVG--LEAGREAFVAS 109

Query: 156 VSTNLV 161
           +  NL+
Sbjct: 110 LERNLI 115

Length = 258

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 38/125 (30%), Positives = 50/125 (40%), Gaps = 26/125 (20%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  V+TG+  GLG   A      G  VV+A R              NL +G  AA   + 
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVR--------------NLDKGKAAAARITA 62

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--------TNKGFKPLL 145
                A V     D+   A V+  ++     +  ID+ INNAG        T  GF+  L
Sbjct: 63  AT-PGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFE--L 119

Query: 146 QF-TN 149
           QF TN
Sbjct: 120 QFGTN 124

Length = 306

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 40.6 bits (96), Expect = 4e-04
 Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 16/129 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            ++TG   GLG  LAR     G R +V+ SRS          L E      + A G    
Sbjct: 3   YLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAE------LEARG---- 52

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
               A+V  +ACDV +   V+ L      +   +   I+ AG  +    L   T E+  +
Sbjct: 53  ----AEVTVVACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLR-DALLANMTAEDFAR 107

Query: 155 IVSTNLVGS 163
           +++  + G+
Sbjct: 108 VLAPKVTGA 116

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 40.7 bits (95), Expect = 5e-04
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 24/208 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG++RG+G+A+A      G  + V   S        ++ E  +   + A GG+++  
Sbjct: 1   VLVTGASRGIGRAIANRLAADGFEICVHYHSGR------SDAESVVSA-IQAQGGNAR-- 51

Query: 96  LVHAKVAG-IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEI 152
           L+   VA  +AC     AD+         E G+    + NAG  +   F  L   + E+ 
Sbjct: 52  LLQFDVADRVACRTLLEADIA--------EHGAYYGVVLNAGITRDAAFPAL---SEEDW 100

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + ++ TNL G           M    +GG I  +    SG         Y + K GL   
Sbjct: 101 DIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASV-SGVMGNRGQVNYSAAKAGLIGA 159

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             +L  E  + K+ V+  +PG++ T++L
Sbjct: 160 TKALAVELAKRKITVNCIAPGLIDTEML 187

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 70/288 (24%), Positives = 107/288 (37%), Gaps = 56/288 (19%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSS 92
           ++V+ITG + G+G   A E    G RV+ A R  + V RM                    
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFT-------------- 48

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-----GSIDIWINNAGTNKGFKPLLQF 147
                     GI  D+ +P  V++    A +E        +    NNAG    + PL   
Sbjct: 49  ----------GILLDLDDPESVER----AADEVIALTDNRLYGLFNNAGFGV-YGPLSTI 93

Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
           + +++EQ  STN  G+   T   +  M    +G  +  M  +  G  STP    Y ++K 
Sbjct: 94  SRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIV--MTSSVMGLISTPGRGAYAASKY 151

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS-GSTIQNKQMFNIICELPETVARTL 266
            L     +L  E + S + V    PG + T    +   T  +K + N     P   AR  
Sbjct: 152 ALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVEN-----PGIAARFT 206

Query: 267 VPRIRVVKGSGKAINYLTPPR-------ILLALVTAWLRR---GRWFD 304
           +    VV    K  + L  P+        L+      L+R   GR  D
Sbjct: 207 LGPEAVVP---KLRHALESPKPKLRYPVTLVTHAVMVLKRLLPGRMMD 251

Length = 256

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 40.3 bits (94), Expect = 8e-04
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 2/107 (1%)

Query: 126 GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN 185
           G+ID+ ++N    +   P+   +  +I Q      +      + A+  M+    G  IF 
Sbjct: 71  GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMKKAGGGSIIFI 130

Query: 186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASP 232
                         ++YG  +     L  SL KE  R  + V+   P
Sbjct: 131 TSAVPKKP--LAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGP 175

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 35/139 (25%), Positives = 51/139 (36%), Gaps = 26/139 (18%)

Query: 35  NVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
            VVITG++ GLG A A+     G+  VV+A R            E+  +E  M     S 
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKA-------EQAAQEVGMPKDSYS- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF----GSIDIWINNAGTNKGFKPLLQFTN 149
                          C+ A +  +  F V+ F      +D  + NA          +FT 
Sbjct: 55  ------------VLHCDLASLDSVRQF-VDNFRRTGRPLDALVCNAAVYLPTAKEPRFTA 101

Query: 150 EEIEQIVSTNLVGSILCTR 168
           +  E  V  N +G  L T 
Sbjct: 102 DGFELTVGVNHLGHFLLTN 120

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 32/142 (22%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAA-- 88
           ++V+ITG+T  LGK L  + L S     ++ +  R            EE L+E +     
Sbjct: 1   KSVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQS-----AEERLRELLKDKLF 55

Query: 89  -GGSSKKNLVHAKVAGIACDVCEP------ADVQKLSNFAVNEFGSIDIWINNAGTNKGF 141
             G +   L  +K+  I  D+ EP       D+Q L          ++I I+ A T    
Sbjct: 56  DRGRNLNPLFESKIVPIEGDLSEPNLGLSDEDLQTLIE-------EVNIIIHCAAT---- 104

Query: 142 KPLLQFTNEEIEQIVSTNLVGS 163
              + F +E +++ +S N++G+
Sbjct: 105 ---VTF-DERLDEALSINVLGT 122

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R +++TG+  G+G+  A  +   G  V++  R       T  +LE    E + AAG    
Sbjct: 13  RIILVTGAGDGIGREAALTYARHGATVILLGR-------TEEKLEAVYDE-IEAAG---- 60

Query: 94  KNLVHAKVAGIACDV--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                 + A I  D+    P + Q+L++    +FG +D  ++NAG      P+ Q   E 
Sbjct: 61  ----GPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEV 116

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG 193
            + ++  N+  + + T+  + ++   P    +F     G  G
Sbjct: 117 WQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQG 158

Length = 247

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 25/90 (27%), Positives = 35/90 (38%), Gaps = 16/90 (17%)

Query: 29  CKAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMA 87
                   +ITG   GLG  +AR     G R +V+ SR   + R                
Sbjct: 146 PGGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALL-------R 198

Query: 88  AGGSSKKNLVHAKVAGIACDVCEPADVQKL 117
           AGG        A+V+ + CDV +PA +  L
Sbjct: 199 AGG--------ARVSVVRCDVTDPAALAAL 220

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 39.6 bits (93), Expect = 0.002
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 15/102 (14%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE--ENLKEGMMAAGGSSKK 94
           ++ G+TRG G+ +A E   +G  V V  RS+ + R      E  E   E + AAGG    
Sbjct: 12  LVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR--- 68

Query: 95  NLVHAKVAGIA--CDVCEPADVQKLSNFAVNEFGSIDIWINN 134
                   GIA   D   P  V+ L      E G +DI +N+
Sbjct: 69  --------GIAVQVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 34/163 (20%), Positives = 66/163 (40%), Gaps = 23/163 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSS 92
           + +VI+G TRG+GKA+  EF  SG  +     S+         +LE+             
Sbjct: 9   KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYG---------- 58

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-----GTNKGFKPLLQF 147
                  K      ++ EP   ++L      +F  +D +I+NA         G+   ++ 
Sbjct: 59  ------IKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRL 112

Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG 190
             + +  I +  +   ++  +EA + M ++  GG I ++   G
Sbjct: 113 KPKGLNNIYTATVNAFVVGAQEAAKRM-EKVGGGSIISLSSTG 154

Length = 260

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 38.3 bits (90), Expect = 0.002
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 42/148 (28%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           +++ G+T  +G A+A+     G  V+ A RSS                            
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDY------------------------- 35

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      D+ + A ++ L  F   + G  D  ++ AG  + F PL + T+ + ++ 
Sbjct: 36  ---------QVDITDEASIKAL--FE--KVGHFDAIVSTAGDAE-FAPLAELTDADFQRG 81

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHI 183
           +++ L+G I   R  +  + D   GG I
Sbjct: 82  LNSKLLGQINLVRHGLPYLND---GGSI 106

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 38.3 bits (89), Expect = 0.004
 Identities = 48/213 (22%), Positives = 83/213 (38%), Gaps = 47/213 (22%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG+T G+GK LA ++   G +V+   R+       + EL                  
Sbjct: 4   VLITGATSGIGKQLALDYAKQGWQVIACGRNQS----VLDELHT---------------- 43

Query: 96  LVHAKVAGIACDVCE-PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI-- 152
              A +  +A DV + P     LS          ++WI NAG         ++ ++    
Sbjct: 44  -QSANIFTLAFDVTDHPGTKAALSQLPFIP----ELWIFNAGD-------CEYMDDGKVD 91

Query: 153 ----EQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTK 206
                ++ + N++G   C  E +     QP    GH   + G+ +   + P    YG++K
Sbjct: 92  ATLMARVFNVNVLGVANCI-EGI-----QPHLSCGHRVVIVGSIASELALPRAEAYGASK 145

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             +     +L  + +   + V T  PG V T L
Sbjct: 146 AAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178

Length = 240

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 13/42 (30%), Positives = 20/42 (47%)

Query: 36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 77
          ++ITG T  +G+AL +     G  V + +RS      T  E 
Sbjct: 1  ILITGGTGFIGRALTQRLTKRGHEVTILTRSPPPGANTKWEG 42

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	368
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	99.98
PRK09134	258	short chain dehydrogenase; Provisional	99.98
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.98
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.98
PRK07060	245	short chain dehydrogenase; Provisional	99.98
PRK12746	254	short chain dehydrogenase; Provisional	99.98
PRK06914	280	short chain dehydrogenase; Provisional	99.98
PRK06101	240	short chain dehydrogenase; Provisional	99.98
COG1028	251	FabG Dehydrogenases with different specificities (	99.98
PRK12827	249	short chain dehydrogenase; Provisional	99.98
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK07074	257	short chain dehydrogenase; Provisional	99.97
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07577	234	short chain dehydrogenase; Provisional	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.96
PRK08017	256	oxidoreductase; Provisional	99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.94
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.86
PLN03209	576	translocon at the inner envelope of chloroplast su	99.86
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.85
PRK06720	169	hypothetical protein; Provisional	99.85
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.83
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.81
PLN02653	340	GDP-mannose 4,6-dehydratase	99.77
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.76
PLN02583	297	cinnamoyl-CoA reductase	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.75
PLN02572	442	UDP-sulfoquinovose synthase	99.75
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.74
PLN00198	338	anthocyanidin reductase; Provisional	99.74
PLN02650	351	dihydroflavonol-4-reductase	99.73
PLN02240	352	UDP-glucose 4-epimerase	99.73
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.72
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.71
PLN02214	342	cinnamoyl-CoA reductase	99.71
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.71
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.69
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.67
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.67
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.65
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.65
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.64
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.63
PLN02686	367	cinnamoyl-CoA reductase	99.62
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.61
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.61
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.56
PLN02427	386	UDP-apiose/xylose synthase	99.56
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.54
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.53
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.52
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.5
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.5
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.5
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.5
PLN02260	668	probable rhamnose biosynthetic enzyme	99.48
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.47
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.46
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.45
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.45
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.42
PLN02206	442	UDP-glucuronate decarboxylase	99.42
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.41
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.4
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.4
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.37
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.37
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.37
CHL00194	317	ycf39 Ycf39; Provisional	99.36
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.28
PLN02996	491	fatty acyl-CoA reductase	99.27
PRK07201	657	short chain dehydrogenase; Provisional	99.25
PRK05865	854	hypothetical protein; Provisional	99.24
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.21
PLN02778	298	3,5-epimerase/4-reductase	99.19
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.19
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.19
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.14
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.13
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.12
PRK08309	177	short chain dehydrogenase; Provisional	99.09
PLN02503	605	fatty acyl-CoA reductase 2	99.06
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.0
PLN02260	668	probable rhamnose biosynthetic enzyme	98.99
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.99
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.98
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.94
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.86
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.81
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.8
PLN00016	378	RNA-binding protein; Provisional	98.72
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.7
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.69
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.68
PRK12320	699	hypothetical protein; Provisional	98.67
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.62
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.58
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.57
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.56
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.55
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.53
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.45
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.26
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.19
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.16
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.14
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.09
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.06
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.04
PRK09620	229	hypothetical protein; Provisional	97.98
COG2910	211	Putative NADH-flavin reductase [General function p	97.95
PLN00106	323	malate dehydrogenase	97.94
PRK14982	340	acyl-ACP reductase; Provisional	97.87
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.85
KOG2774	366	consensus NAD dependent epimerase [General functio	97.82
PTZ00325	321	malate dehydrogenase; Provisional	97.76
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.73
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.69
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.68
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.67
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.61
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.58
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.57
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	97.54
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.52
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.45
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.4
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.27
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.24
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.21
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.19
PRK06849	389	hypothetical protein; Provisional	97.19
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.15
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.15
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.11
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.1
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.05
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.03
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.03
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.02
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.02
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.01
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.0
COG3268	382	Uncharacterized conserved protein [Function unknow	96.99
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.93
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.88
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.88
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.88
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.85
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.85
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.85
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.83
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.79
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.75
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.72
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.71
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.69
PRK05086	312	malate dehydrogenase; Provisional	96.69
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.68
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.68
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.67
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.66
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.64
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.63
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.62
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.58
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.57
PRK14968	188	putative methyltransferase; Provisional	96.46
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.46
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.46
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.45
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.45
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.44
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.44
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.41
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.41
PLN00203	519	glutamyl-tRNA reductase	96.39
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.38
PTZ00117	319	malate dehydrogenase; Provisional	96.35
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.33
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.32
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.23
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.23
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.23
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.19
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.17
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.14
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.13
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.11
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.11
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.11
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.09
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.06
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.01
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.92
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.89
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.88
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.87
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.87
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.87
PRK09496	453	trkA potassium transporter peripheral membrane com	95.83
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.79
PRK05442	326	malate dehydrogenase; Provisional	95.77
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.76
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.74
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.73
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.72
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.72
PRK04148	134	hypothetical protein; Provisional	95.69
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.68
PLN02602	350	lactate dehydrogenase	95.68
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	95.55
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.53
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.53
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.5
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.49
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.48
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.47
PRK08328	231	hypothetical protein; Provisional	95.45
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.43
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	95.42
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.41
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.38
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.38
PLN02740	381	Alcohol dehydrogenase-like	95.35
PRK08223	287	hypothetical protein; Validated	95.3
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.26
PRK09496	453	trkA potassium transporter peripheral membrane com	95.25
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.24
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.24
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.23
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.21
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.16
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.09
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.06
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.06
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.04
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.04
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.03
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.02
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.02
PRK07877	722	hypothetical protein; Provisional	95.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.99
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.96
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.92
PTZ00354	334	alcohol dehydrogenase; Provisional	94.92
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.92
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.91
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	94.91
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.9
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.89
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.83
PRK06223	307	malate dehydrogenase; Reviewed	94.81
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.8
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.78
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.75
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.73
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.72
PRK12480	330	D-lactate dehydrogenase; Provisional	94.72
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.72
COG2130	340	Putative NADP-dependent oxidoreductases [General f	94.72
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.67
PLN02827	378	Alcohol dehydrogenase-like	94.67
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	94.66
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	94.58
PRK08655	437	prephenate dehydrogenase; Provisional	94.58
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.57
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.51
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.49
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	94.48
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.43
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.42
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.34
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.33
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.29
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.25
PLN02928	347	oxidoreductase family protein	94.23
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.18
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.18
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	94.14
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	94.12
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.1
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.09
PRK11207	197	tellurite resistance protein TehB; Provisional	94.04
PRK14851	679	hypothetical protein; Provisional	94.03
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.03
PRK14967	223	putative methyltransferase; Provisional	94.01
PRK14030	445	glutamate dehydrogenase; Provisional	93.98
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	93.95
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	93.91
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	93.9
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	93.83
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.81
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	93.77
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	93.73
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	93.67
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	93.65
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	93.6
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	93.58

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.3e-44  Score=314.70  Aligned_cols=225  Identities=28%  Similarity=0.400  Sum_probs=200.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++|||||||||.++|++|++.|++|++++|+.++++++.+++.+                   .++.++..|++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-------------------~~~~~~~~DVt   63 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-------------------GAALALALDVT   63 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-------------------CceEEEeeccC
Confidence            45789999999999999999999999999999999999999999888742                   46888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++.+.++|+++|+||||||.+.. .++.+.+.++|++++++|+.|.++.+++++|.|.++ +.|+|||+||.
T Consensus        64 D~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g-~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~Si  141 (246)
T COG4221          64 DRAAVEAAIEALPEEFGRIDILVNNAGLALG-DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSI  141 (246)
T ss_pred             CHHHHHHHHHHHHHhhCcccEEEecCCCCcC-ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccc
Confidence            9999999999999999999999999999984 999999999999999999999999999999999998 67899999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch----hh-hhhhhcCCHHHHHH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN----KQ-MFNIICELPETVAR  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~----~~-~~~~~~~~pe~~a~  264 (368)
                       ++..++|+.+.|++||+++.+|++.|++|+.+++|||.+|+||.+.|..+........    .. .......+|+++|+
T Consensus       142 -AG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~  220 (246)
T COG4221         142 -AGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAE  220 (246)
T ss_pred             -cccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHH
Confidence             7899999999999999999999999999999999999999999998776644322211    11 12333457999999


Q ss_pred             Hhhhhhhhcccc
Q 017635          265 TLVPRIRVVKGS  276 (368)
Q Consensus       265 ~~~~~~~~~~~~  276 (368)
                      .++.....|+.+
T Consensus       221 ~V~~~~~~P~~v  232 (246)
T COG4221         221 AVLFAATQPQHV  232 (246)
T ss_pred             HHHHHHhCCCcc
Confidence            999888887764

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=4.5e-44  Score=322.71  Aligned_cols=226  Identities=26%  Similarity=0.396  Sum_probs=202.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..++|++||||||+|||+++|++|+++|++|++++|++++++++.++++..                .+.++.++++|++
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~----------------~~v~v~vi~~DLs   66 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK----------------TGVEVEVIPADLS   66 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh----------------hCceEEEEECcCC
Confidence            457899999999999999999999999999999999999999999999875                3468999999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +++++.++.+++.++.+.||+||||||+.. ++++.+.+.++.++++++|+.+...++++++|.|.++ +.|+||||+|.
T Consensus        67 ~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~  144 (265)
T COG0300          67 DPEALERLEDELKERGGPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSA  144 (265)
T ss_pred             ChhHHHHHHHHHHhcCCcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            999999999999999899999999999988 7899999999999999999999999999999999998 68999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.|..+.|++||+++.+|+++|+.|++++||+|.+++||+|.|+++..............+..+||++|+..+..
T Consensus       145 -ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~  223 (265)
T COG0300         145 -AGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKA  223 (265)
T ss_pred             -hhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccccccccccccchhhccCHHHHHHHHHHH
Confidence             7889999999999999999999999999999999999999999999999862111111122344456899999999988


Q ss_pred             hhhcc
Q 017635          270 IRVVK  274 (368)
Q Consensus       270 ~~~~~  274 (368)
                      +...+
T Consensus       224 l~~~k  228 (265)
T COG0300         224 LEKGK  228 (265)
T ss_pred             HhcCC
Confidence            76433

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1e-44  Score=303.67  Aligned_cols=243  Identities=21%  Similarity=0.300  Sum_probs=213.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++..|.++||||++|||+++++.|+++|++|++++++.+..++++..|..                  ..+...+.||++
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g------------------~~~h~aF~~DVS   72 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGG------------------YGDHSAFSCDVS   72 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCC------------------CCccceeeeccC
Confidence            56779999999999999999999999999999999999988888777642                  135667899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~Iv~isS  188 (368)
                      +.++++..+++..+.+|++++||||||+.. ...+..+..++|+..+.+|+.|.|+++|++...|... .++++|||+||
T Consensus        73 ~a~~v~~~l~e~~k~~g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsS  151 (256)
T KOG1200|consen   73 KAHDVQNTLEEMEKSLGTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSS  151 (256)
T ss_pred             cHHHHHHHHHHHHHhcCCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehh
Confidence            999999999999999999999999999988 6888899999999999999999999999999995433 35569999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      + .+..+.-++..|++||+++.+|+++.++|+++++||||.|+||+|.|||.....+...          .+-+.-.|+.
T Consensus       152 I-VGkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~----------~ki~~~iPmg  220 (256)
T KOG1200|consen  152 I-VGKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVL----------DKILGMIPMG  220 (256)
T ss_pred             h-hcccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHH----------HHHHccCCcc
Confidence            8 6888899999999999999999999999999999999999999999999754332211          1122235578


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      |++.+||+++.+.||+||...|+|++.+-.+|++
T Consensus       221 r~G~~EevA~~V~fLAS~~ssYiTG~t~evtGGl  254 (256)
T KOG1200|consen  221 RLGEAEEVANLVLFLASDASSYITGTTLEVTGGL  254 (256)
T ss_pred             ccCCHHHHHHHHHHHhccccccccceeEEEeccc
Confidence            8999999999999999999999999999888875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-42  Score=315.53  Aligned_cols=196  Identities=26%  Similarity=0.427  Sum_probs=181.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++.+|+|+|||||+|||+++|++|+++|++++++.|+.++++...+++++....               .++++++||
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~---------------~~v~~~~~D   71 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSL---------------EKVLVLQLD   71 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCc---------------CccEEEeCc
Confidence            45789999999999999999999999999999999999999999998999875431               169999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++..+||++|+||||||+.. ....++.+.++++.+|++|++|++.++|+++|+|++++ .|+||++|
T Consensus        72 vs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvis  149 (282)
T KOG1205|consen   72 VSDEESVKKFVEWAIRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVIS  149 (282)
T ss_pred             cCCHHHHHHHHHHHHHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEe
Confidence            99999999999999999999999999999988 78888999999999999999999999999999999984 89999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccCccccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~  242 (368)
                      |+ ++..+.|..+.|+|||+|+.+|+++|++|+.+.+  |++ +|+||+|+|++...
T Consensus       150 Si-aG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  150 SI-AGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             cc-ccccCCCcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence            98 7999999999999999999999999999999977  566 99999999997754

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-42  Score=317.52  Aligned_cols=251  Identities=18%  Similarity=0.212  Sum_probs=210.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.                .+.++.++++|+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dv   67 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE----------------SNVDVSYIVADL   67 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCceEEEEecC
Confidence            4578999999999999999999999999999999999999888877777542                234688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++. ++|++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+++ +.|+||++||
T Consensus        68 ~~~~~i~~~~~~~~-~~g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS  144 (263)
T PRK08339         68 TKREDLERTVKELK-NIGEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTS  144 (263)
T ss_pred             CCHHHHHHHHHHHH-hhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence            99999999999985 6899999999999866 5778889999999999999999999999999999877 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH-----HH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----VA  263 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----~a  263 (368)
                      . ++..+.+....|+++|+|+++|+++++.|++++|||||+|+||+|+|++...........    ....+++     ..
T Consensus       145 ~-~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~----~~~~~~~~~~~~~~  219 (263)
T PRK08339        145 V-AIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKR----EGKSVEEALQEYAK  219 (263)
T ss_pred             c-cccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhc----cCCCHHHHHHHHhc
Confidence            7 566778888999999999999999999999999999999999999999863211000000    0001111     12


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..+++++..|++++..+.||+++...++++..+..||++.
T Consensus       220 ~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        220 PIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             cCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence            3456778889999999999999999899999888888764

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.9e-41  Score=300.91  Aligned_cols=223  Identities=24%  Similarity=0.351  Sum_probs=200.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.-+.+|++||||||++|||+++|.+|+++|+++++.+.+.+..+++.+++++                 . +++..+.|
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~-----------------~-g~~~~y~c   93 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRK-----------------I-GEAKAYTC   93 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHh-----------------c-CceeEEEe
Confidence            56678999999999999999999999999999999999999999999999876                 2 37899999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.+++.+.++++++++|.+|+||||||+.. ..++.+.+.+++++++++|+.|+|..+|+++|.|.++ +.|+||++
T Consensus        94 dis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~I  171 (300)
T KOG1201|consen   94 DISDREEIYRLAKKVKKEVGDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTI  171 (300)
T ss_pred             cCCCHHHHHHHHHHHHHhcCCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEe
Confidence            999999999999999999999999999999988 6888999999999999999999999999999999988 68999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      +|+ ++..+.++...|++||+|+.+|.++|..|+.   ..||+..+|+|++++|.|...  ......+++.  .+|+++|
T Consensus       172 aS~-aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~--~~~~~~l~P~--L~p~~va  246 (300)
T KOG1201|consen  172 ASV-AGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG--ATPFPTLAPL--LEPEYVA  246 (300)
T ss_pred             hhh-hcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC--CCCCccccCC--CCHHHHH
Confidence            998 7999999999999999999999999999876   467999999999999999875  2222233333  3799999


Q ss_pred             HHhhhhhhhcc
Q 017635          264 RTLVPRIRVVK  274 (368)
Q Consensus       264 ~~~~~~~~~~~  274 (368)
                      +.+++.+.+.+
T Consensus       247 ~~Iv~ai~~n~  257 (300)
T KOG1201|consen  247 KRIVEAILTNQ  257 (300)
T ss_pred             HHHHHHHHcCC
Confidence            99998886543

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-41  Score=311.32  Aligned_cols=246  Identities=21%  Similarity=0.283  Sum_probs=206.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+++++                 .+.++.++.+|+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~Dl   64 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEA-----------------LGRKFHFITADL   64 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHH-----------------cCCeEEEEEeCC
Confidence            4678999999999999999999999999999999998643  223333332                 235788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++++.+|+||++||
T Consensus        65 ~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS  143 (251)
T PRK12481         65 IQQKDIDSIVSQAVEVMGHIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS  143 (251)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence            9999999999999999999999999999876 577888999999999999999999999999999987644689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ..+...+.+.+
T Consensus       144 ~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~--~~~------~~~~~~~~p~~  214 (251)
T PRK12481        144 M-LSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRAD--TAR------NEAILERIPAS  214 (251)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccC--hHH------HHHHHhcCCCC
Confidence            7 56677788889999999999999999999999999999999999999986432110  000      01222344567


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++..|++++..+.||+++...++++..+..+|++.
T Consensus       215 ~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        215 RWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             CCcCHHHHHHHHHHHhCccccCcCCceEEECCCEe
Confidence            78889999999999999999899999998888864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.2e-41  Score=311.41  Aligned_cols=258  Identities=29%  Similarity=0.422  Sum_probs=211.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++|||+++|||+++|++|++.|++|++++|+.+++++..+++.....              .+.++..+.||
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D   68 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY--------------TGGKVLAIVCD   68 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--------------CCCeeEEEECc
Confidence            4578999999999999999999999999999999999999999998888765321              24679999999


Q ss_pred             CCCHHHHHHHHHHHHhH-cCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchH-HHHHHHHHHHHHHcCCCCcEEEE
Q 017635          108 VCEPADVQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG-SILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g-~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +++.++++++++...++ +|+||+||||||......++.+.++|+|++++++|+.| .+.+.+.+.|+++++ ++|+|++
T Consensus        69 v~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~-~gg~I~~  147 (270)
T KOG0725|consen   69 VSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKS-KGGSIVN  147 (270)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhc-CCceEEE
Confidence            99999999999999998 79999999999998755579999999999999999996 555556655655554 7899999


Q ss_pred             EcCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcc-cchhhhhhhhcCCHHHHH
Q 017635          186 MDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST-IQNKQMFNIICELPETVA  263 (368)
Q Consensus       186 isS~~~~~~~~~~~-~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~pe~~a  263 (368)
                      +||. ++..+.+.. ..|++||+|+++|+|++|.|++++|||||+|+||.|.|++...... ...+.+.+.    .+.-.
T Consensus       148 ~ss~-~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~----~~~~~  222 (270)
T KOG0725|consen  148 ISSV-AGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEA----TDSKG  222 (270)
T ss_pred             Eecc-ccccCCCCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhh----hcccc
Confidence            9887 455444444 7999999999999999999999999999999999999998211111 101111110    00112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      ..+++++..+++++..+.||+++...+++++.+..||+....
T Consensus       223 ~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~~~~  264 (270)
T KOG0725|consen  223 AVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGFTVV  264 (270)
T ss_pred             ccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCEEee
Confidence            346889999999999999999998889999999999987553

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-41  Score=312.85  Aligned_cols=246  Identities=14%  Similarity=0.158  Sum_probs=202.3

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      |.+++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.++.                +.. .++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~----------------~~~-~~~~~   62 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL----------------GSD-YVYEL   62 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc----------------CCc-eEEEe
Confidence            45678999999997  89999999999999999999999853 333344443321                123 56899


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |++|.++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++++++|+.|++++++.++|+|++   +|+|
T Consensus        63 Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~I  139 (274)
T PRK08415         63 DVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASV  139 (274)
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcE
Confidence            9999999999999999999999999999998542   256788999999999999999999999999999964   4799


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.|.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++......  .....      .....
T Consensus       140 v~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~~~~------~~~~~  210 (274)
T PRK08415        140 LTLSYL-GGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGD--FRMIL------KWNEI  210 (274)
T ss_pred             EEEecC-CCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccch--hhHHh------hhhhh
Confidence            999987 5667788889999999999999999999999999999999999999987432110  00000      01112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +.+++++..|+|++..+.||+++...++++..+..+|++..
T Consensus       211 ~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        211 NAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             hCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCcccc
Confidence            34667888899999999999999999999999999998754

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-41  Score=310.38  Aligned_cols=241  Identities=15%  Similarity=0.143  Sum_probs=201.0

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.                   +.++.+++||
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~-------------------~~~~~~~~~D   63 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV-------------------DEEDLLVECD   63 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc-------------------cCceeEEeCC
Confidence            4689999999999  8999999999999999999999983 4443333331                   1357789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|+++++++++++.+++|++|+||||||...+   ..++.+.+.++|++.+++|+.+++.+++.++|+|++   +|+||
T Consensus        64 l~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv  140 (252)
T PRK06079         64 VASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIV  140 (252)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEE
Confidence            999999999999999999999999999998642   257788999999999999999999999999999963   48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.+.+..|++||+|+++|+++|+.|++++||+||+|+||+|+|++......  .+...      .+...+
T Consensus       141 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~--~~~~~------~~~~~~  211 (252)
T PRK06079        141 TLTYF-GSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG--HKDLL------KESDSR  211 (252)
T ss_pred             EEecc-CccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC--hHHHH------HHHHhc
Confidence            99987 5667778899999999999999999999999999999999999999997533211  01110      111223


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+.+++..|+|++..+.||+++...++++..+..+|++
T Consensus       212 ~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        212 TVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             CcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            45678889999999999999999989999888888875

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-41  Score=307.28  Aligned_cols=246  Identities=24%  Similarity=0.367  Sum_probs=208.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..++++.                 .+.++..+.+|+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   67 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT-----------------SGGKVVPVCCDV   67 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEccC
Confidence            457899999999999999999999999999999999999888887777654                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+++++++|+++||
T Consensus        68 ~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  146 (253)
T PRK05867         68 SQHQQVTSMLDQVTAELGGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTAS  146 (253)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECc
Confidence            9999999999999999999999999999876 577888999999999999999999999999999987655689999988


Q ss_pred             CCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          189 AGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      ..+.....+ ....|++||+|+++|++++++|++++||+||+|+||+|+|++......     .      ..+...+.++
T Consensus       147 ~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~-----~------~~~~~~~~~~  215 (253)
T PRK05867        147 MSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTE-----Y------QPLWEPKIPL  215 (253)
T ss_pred             HHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchH-----H------HHHHHhcCCC
Confidence            632222223 457899999999999999999999999999999999999998643210     0      0111223456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++..|++++..+.||+++...+++|+.+..||++.
T Consensus       216 ~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        216 GRLGRPEELAGLYLYLASEASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             CCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCCcc
Confidence            778889999999999999999999999999998863

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-40  Score=306.58  Aligned_cols=249  Identities=16%  Similarity=0.201  Sum_probs=203.4

Q ss_pred             cccccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           25 LEEHCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      |.+.+++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.++.                 ....
T Consensus         2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~~-----------------~~~~   63 (258)
T PRK07533          2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEEL-----------------DAPI   63 (258)
T ss_pred             CCcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHhh-----------------ccce
Confidence            446678899999999998  5999999999999999999999986432 2333443321                 1245


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      +++||++|.++++++++++.+++|++|++|||||+...   ..++.+.+.++|++.+++|+.+++++++.++|+|++   
T Consensus        64 ~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---  140 (258)
T PRK07533         64 FLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---  140 (258)
T ss_pred             EEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---
Confidence            78999999999999999999999999999999998542   256778999999999999999999999999999952   


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  259 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  259 (368)
                      +|+||++||. ++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|+||+|+|++...... . ....      .
T Consensus       141 ~g~Ii~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~-~-~~~~------~  211 (258)
T PRK07533        141 GGSLLTMSYY-GAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD-F-DALL------E  211 (258)
T ss_pred             CCEEEEEecc-ccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC-c-HHHH------H
Confidence            5899999987 5666778889999999999999999999999999999999999999998643211 0 0000      1


Q ss_pred             HHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          260 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       260 e~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +...+.+++++..|++++..+.||+++...+++|..+..||++.
T Consensus       212 ~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg~~  255 (258)
T PRK07533        212 DAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYH  255 (258)
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCccc
Confidence            11233456677888999999999999988899999998888763

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.9e-41  Score=309.66  Aligned_cols=244  Identities=16%  Similarity=0.173  Sum_probs=199.6

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+.+..+ ..+++.+.                .+ ...++++|
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~-~~~~~~~~----------------~g-~~~~~~~D   65 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGK-RVKPLAES----------------LG-SDFVLPCD   65 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHH-HHHHHHHh----------------cC-CceEEeCC
Confidence            36889999999996  9999999999999999999999864332 23333321                11 12468999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|.++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++|+++|+|++   +|+||
T Consensus        66 v~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv  142 (271)
T PRK06505         66 VEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSML  142 (271)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEE
Confidence            999999999999999999999999999998641   146778999999999999999999999999999973   48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.|.+..|++||+|+.+|+++|+.|++++|||||+|+||+|+|++......  ......      .....
T Consensus       143 ~isS~-~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~--~~~~~~------~~~~~  213 (271)
T PRK06505        143 TLTYG-GSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGD--ARAIFS------YQQRN  213 (271)
T ss_pred             EEcCC-CccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcc--hHHHHH------HHhhc
Confidence            99987 5667788899999999999999999999999999999999999999997532111  000000      01112


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|++..+.||+++...++++..+..||++.
T Consensus       214 ~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        214 SPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             CCccccCCHHHHHHHHHHHhCccccccCceEEeecCCcc
Confidence            356777889999999999999998899999999998874

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.5e-40  Score=305.95  Aligned_cols=246  Identities=16%  Similarity=0.174  Sum_probs=202.5

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+.+  +.++..+++.+.                 ..++.++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~   64 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP-----------------LNPSLFL   64 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc-----------------cCcceEe
Confidence            35789999999986  89999999999999999999877643  344445555431                 1346678


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      ++|++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|.|++   +|
T Consensus        65 ~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g  141 (258)
T PRK07370         65 PCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GG  141 (258)
T ss_pred             ecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CC
Confidence            999999999999999999999999999999998531   256788899999999999999999999999999964   48


Q ss_pred             EEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          182 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       182 ~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      +||++||. ++..+.|.+..|++||+|+++|+++|+.|++++||+||+|+||+|+|++...... . ....      .+.
T Consensus       142 ~Iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~-~-~~~~------~~~  212 (258)
T PRK07370        142 SIVTLTYL-GGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG-I-LDMI------HHV  212 (258)
T ss_pred             eEEEEecc-ccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc-c-hhhh------hhh
Confidence            99999987 5667888999999999999999999999999999999999999999997532110 0 0000      011


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ....++.++..++|++..+.||+++...++++..+..||++.
T Consensus       213 ~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        213 EEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGYC  254 (258)
T ss_pred             hhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCccc
Confidence            123456778889999999999999999999999888888763

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-40  Score=306.27  Aligned_cols=245  Identities=18%  Similarity=0.141  Sum_probs=201.1

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++|+++||||++  |||+++|++|+++|++|++++|+. +.++..+++.+.                .+. ..++++|
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~----------------~g~-~~~~~~D   66 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE----------------IGC-NFVSELD   66 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh----------------cCC-ceEEEcc
Confidence            45789999999997  999999999999999999999884 444445555432                112 2457899


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|+++++++++++.+++|++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++.++|+|++   +|+||
T Consensus        67 v~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv  143 (260)
T PRK06603         67 VTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIV  143 (260)
T ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEE
Confidence            999999999999999999999999999997531   246778999999999999999999999999999953   48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.|.+..|++||+|+++|+++|+.|++++||+||+|+||+|+|++......  ....      ..+....
T Consensus       144 ~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~~~------~~~~~~~  214 (260)
T PRK06603        144 TLTYY-GAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGD--FSTM------LKSHAAT  214 (260)
T ss_pred             EEecC-ccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCC--cHHH------HHHHHhc
Confidence            99987 5667778889999999999999999999999999999999999999997532110  0000      0111223


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      .+++++..|+|+++.+.||+++...++++..+..||++.-
T Consensus       215 ~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  254 (260)
T PRK06603        215 APLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCGYNI  254 (260)
T ss_pred             CCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCcccc
Confidence            4677888899999999999999988999999999988743

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-40  Score=303.52  Aligned_cols=252  Identities=24%  Similarity=0.296  Sum_probs=211.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~   68 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDV---------------AGARVLAVPADVT   68 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc---------------CCceEEEEEccCC
Confidence            4679999999999999999999999999999999999988888877775421               2356889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.++++++|+||||||... ..+..+.+.++|++.+++|+.+++.++++++|.|+++ +.|+||++||.
T Consensus        69 ~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~  146 (260)
T PRK07063         69 DAASVAAAVAAAEEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIAST  146 (260)
T ss_pred             CHHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECCh
Confidence            999999999999999999999999999865 4666788999999999999999999999999999876 56899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.+....|++||+|+++|+++++.|++++|||||+|+||+|+|++............ .   .........++++
T Consensus       147 -~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~-~---~~~~~~~~~~~~r  221 (260)
T PRK07063        147 -HAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPA-A---ARAETLALQPMKR  221 (260)
T ss_pred             -hhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChH-H---HHHHHHhcCCCCC
Confidence             5677788889999999999999999999999999999999999999998643211000000 0   0011112345677


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..|++++..+.||+++...+++|..+..||++.
T Consensus       222 ~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        222 IGRPEEVAMTAVFLASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             CCCHHHHHHHHHHHcCccccccCCcEEEECCCee
Confidence            8899999999999999998899999998888764

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1e-39  Score=302.71  Aligned_cols=251  Identities=20%  Similarity=0.297  Sum_probs=207.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++++                 .+.++.++++|++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   64 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS-----------------NGGKAKAYHVDIS   64 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh-----------------cCCeEEEEEeecC
Confidence            3678999999999999999999999999999999999 777777777754                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++++++++++++.+++|++|+||||||......++.+.+.++|++++++|+.+++.+++.++|+|+++  +|+||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~  142 (272)
T PRK08589         65 DEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSF  142 (272)
T ss_pred             CHHHHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCch
Confidence            99999999999999999999999999986534577788999999999999999999999999999875  4899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.+....|++||+|+++|+++++.|+.++||+||+|+||+|+|++...............+.  .......++++
T Consensus       143 -~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  219 (272)
T PRK08589        143 -SGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFR--ENQKWMTPLGR  219 (272)
T ss_pred             -hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHh--hhhhccCCCCC
Confidence             566777888999999999999999999999999999999999999999865322111101000000  00001234566


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..++++++.+.||+++...++++..+..+|++.
T Consensus       220 ~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg~~  253 (272)
T PRK08589        220 LGKPEEVAKLVVFLASDDSSFITGETIRIDGGVM  253 (272)
T ss_pred             CcCHHHHHHHHHHHcCchhcCcCCCEEEECCCcc
Confidence            7788899999999999888888888888888764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-40  Score=303.98  Aligned_cols=244  Identities=13%  Similarity=0.104  Sum_probs=198.8

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|+++||||  ++|||+++|++|+++|++|++++|+. +.++..+++.+.                . .....++||+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~----------------~-~~~~~~~~Dv   65 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAE----------------L-DSELVFRCDV   65 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc----------------c-CCceEEECCC
Confidence            67899999997  67999999999999999999998863 344444555331                1 2345789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---C-CCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---K-PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~-~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|+++++++++++.+++|++|+||||||+....   . .+++.+.++|++.+++|+.+++++++.++|.|+++  +|+||
T Consensus        66 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv  143 (261)
T PRK08690         66 ASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIV  143 (261)
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEE
Confidence            999999999999999999999999999986421   1 24567889999999999999999999999999754  48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.|++..|++||+|+.+|+++++.|++++|||||+|+||+|+|++......  .....      .+....
T Consensus       144 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~--~~~~~------~~~~~~  214 (261)
T PRK08690        144 ALSYL-GAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIAD--FGKLL------GHVAAH  214 (261)
T ss_pred             EEccc-ccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCc--hHHHH------HHHhhc
Confidence            99887 5666788899999999999999999999999999999999999999997543211  00100      011123


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|+++.+.||+++...+.++..+..||++.
T Consensus       215 ~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        215 NPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCCcc
Confidence            467788899999999999999998889999998888764

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-40  Score=300.19  Aligned_cols=247  Identities=25%  Similarity=0.319  Sum_probs=206.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++.+|+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   64 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRA-----------------EGGEAVALAGDV   64 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCC
Confidence            467899999999999999999999999999999999999988887777754                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|+||||||...+..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS  143 (254)
T PRK07478         65 RDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTST  143 (254)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            999999999999999999999999999986434677889999999999999999999999999999877 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-HHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~  267 (368)
                      ..+...+.+....|++||+++++++++++.|+.++||+||+|+||+++|++.......  ....       +.. ...+.
T Consensus       144 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~-------~~~~~~~~~  214 (254)
T PRK07478        144 FVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDT--PEAL-------AFVAGLHAL  214 (254)
T ss_pred             hHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCC--HHHH-------HHHHhcCCC
Confidence            7332356788899999999999999999999999999999999999999976432110  0000       011 11234


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.||+++...+++|..+..+|++
T Consensus       215 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~  249 (254)
T PRK07478        215 KRMAQPEEIAQAALFLASDAASFVTGTALLVDGGV  249 (254)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCch
Confidence            56677888888889999988878888888777765

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-40  Score=301.58  Aligned_cols=255  Identities=20%  Similarity=0.263  Sum_probs=212.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~   68 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKF---------------PGARLLAARCDV   68 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEEecC
Confidence            35789999999999999999999999999999999999998888877775532               234788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|+++ +.|+||++||
T Consensus        69 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  146 (265)
T PRK07062         69 LDEADVAAFAAAVEARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS  146 (265)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence            9999999999999999999999999999865 5778889999999999999999999999999999876 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH---HHH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV---ART  265 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~---a~~  265 (368)
                      . ++..+.+....|+++|+|+.+|+++++.|+.++||+||+|+||+|+|++............ .......+.+   ...
T Consensus       147 ~-~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  224 (265)
T PRK07062        147 L-LALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPG-QSWEAWTAALARKKGI  224 (265)
T ss_pred             c-cccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccC-CChHHHHHHHhhcCCC
Confidence            7 5667778889999999999999999999999999999999999999998643211000000 0000001111   123


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++++..|++++..+.||+++...+++|..+..+|++
T Consensus       225 p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg~  261 (265)
T PRK07062        225 PLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF  261 (265)
T ss_pred             CcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCce
Confidence            5667888999999999999998889999988888875

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-40  Score=308.15  Aligned_cols=270  Identities=17%  Similarity=0.226  Sum_probs=204.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----------HHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS----------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.          ++++++.+++..                 .+.
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~   67 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTA-----------------AGG   67 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHh-----------------cCC
Confidence            46899999999999999999999999999999999984          344444455433                 234


Q ss_pred             eeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEcc-CCCC---CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 017635          100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA-GTNK---GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  175 (368)
Q Consensus       100 ~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nA-G~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  175 (368)
                      ++.+++||++|+++++++++++.+++|+||+||||| |...   ...++.+.+.+++++.+++|+.+++.++++++|+|+
T Consensus        68 ~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~  147 (305)
T PRK08303         68 RGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLI  147 (305)
T ss_pred             ceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence            677899999999999999999999999999999999 7531   125677888999999999999999999999999998


Q ss_pred             cCCCCcEEEEEcCCCCCCC--CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhh
Q 017635          176 DQPKGGHIFNMDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN  253 (368)
Q Consensus       176 ~~~~~g~Iv~isS~~~~~~--~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~  253 (368)
                      ++ ++|+||++||..+...  +.+....|++||+|+.+|+++|+.|++++|||||+|+||+|+|++............  
T Consensus       148 ~~-~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~--  224 (305)
T PRK08303        148 RR-PGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENW--  224 (305)
T ss_pred             hC-CCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccch--
Confidence            76 4689999998633221  334567899999999999999999999999999999999999998532110000000  


Q ss_pred             hhcCCHHHHHHHh-hhhhhhcccccceeeeccCHHH-HHHHhhhhhcCCceecCCCccccchhhhhhhhhhccc
Q 017635          254 IICELPETVARTL-VPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR  325 (368)
Q Consensus       254 ~~~~~pe~~a~~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~w~~~~  325 (368)
                           .+.....+ ..+...|++++..+.||+++.. .+++|+.+ .++.+.++.+...+...+++||+-.++.
T Consensus       225 -----~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (305)
T PRK08303        225 -----RDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSL-SSGQLARVYGFTDLDGSRPDAWRYLVEV  292 (305)
T ss_pred             -----hhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEE-EhHHHHHhcCccCCCCCCCcchhhhhhc
Confidence                 11112223 3455678889999999998774 46665543 3444445555555556666777655443

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.7e-40  Score=300.45  Aligned_cols=246  Identities=17%  Similarity=0.166  Sum_probs=199.0

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +++++|+++||||+  +|||+++|++|+++|++|++++|+... ++..+++.++.               .+.++.++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~---------------~~~~~~~~~~   66 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTL---------------EGQESLLLPC   66 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHc---------------CCCceEEEec
Confidence            35789999999997  899999999999999999999876422 12223333221               1246778999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |++|+++++++++++.+++|++|++|||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   +|+|
T Consensus        67 Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~I  143 (257)
T PRK08594         67 DVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSI  143 (257)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceE
Confidence            9999999999999999999999999999997531   256778899999999999999999999999999953   5899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.+.+..|++||+|+++|+++|+.|++++|||||+|+||+|+|++...... .. ...      .+...
T Consensus       144 v~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~~-~~~------~~~~~  214 (257)
T PRK08594        144 VTLTYL-GGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG-FN-SIL------KEIEE  214 (257)
T ss_pred             EEEccc-CCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc-cc-HHH------HHHhh
Confidence            999987 5667778889999999999999999999999999999999999999997432110 00 000      01112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +.++.++..|++++..+.||+++...++++..+..||++
T Consensus       215 ~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg~  253 (257)
T PRK08594        215 RAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSGY  253 (257)
T ss_pred             cCCccccCCHHHHHHHHHHHcCcccccccceEEEECCch
Confidence            335667788899999999999999989999888888775

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=300.29  Aligned_cols=242  Identities=14%  Similarity=0.169  Sum_probs=196.8

Q ss_pred             CCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|+++||||++  |||+++|++|+++|++|++++|+ +++++..+++...                 ...+.+++||+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~-----------------~~~~~~~~~Dl   65 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQ-----------------LGSDIVLPCDV   65 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhc-----------------cCCceEeecCC
Confidence            5789999999986  99999999999999999999997 3455555555432                 12356789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC----CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF----KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|+++++++++++.+++|++|++|||||+....    .++.+.+.++|++.+++|+.+++.+++.++|.|+ +  +|+||
T Consensus        66 ~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~Iv  142 (262)
T PRK07984         66 AEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P--GSALL  142 (262)
T ss_pred             CCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C--CcEEE
Confidence            999999999999999999999999999985421    1156688999999999999999999999998664 2  47999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.+.+..|++||+|+++|+++++.|++++|||||+|+||+|+|++......  ....      .......
T Consensus       143 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~--~~~~------~~~~~~~  213 (262)
T PRK07984        143 TLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKM------LAHCEAV  213 (262)
T ss_pred             EEecC-CCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCc--hHHH------HHHHHHc
Confidence            99887 5667788899999999999999999999999999999999999999986432110  0000      0111223


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..|++++..+.||+++...++++..+..+|++
T Consensus       214 ~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg~  251 (262)
T PRK07984        214 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  251 (262)
T ss_pred             CCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            45678888999999999999998888888888888775

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-39  Score=295.83  Aligned_cols=246  Identities=22%  Similarity=0.295  Sum_probs=207.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+.+ .+++..+++..                 .+.++.++++
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~   65 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA-----------------AGRRAIQIAA   65 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----------------cCCceEEEEc
Confidence            35688999999999999999999999999999999999764 45555566543                 2356788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++
T Consensus        66 D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i  143 (254)
T PRK06114         66 DVTSKADLRAAVARTEAELGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNI  143 (254)
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999876 5778889999999999999999999999999999876 57899999


Q ss_pred             cCCCCCCCCCC--CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          187 DGAGSGGSSTP--LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       187 sS~~~~~~~~~--~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ||. ++..+.+  ....|+++|+|+++++++++.|+.++||+||+|+||+++|++......  .+.       ..+....
T Consensus       144 sS~-~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~--~~~-------~~~~~~~  213 (254)
T PRK06114        144 ASM-SGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEM--VHQ-------TKLFEEQ  213 (254)
T ss_pred             Cch-hhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccc--hHH-------HHHHHhc
Confidence            987 3444333  368999999999999999999999999999999999999998642110  000       0122234


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..|+|++..+.||+++...+++|+.+..+|++
T Consensus       214 ~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg~  251 (254)
T PRK06114        214 TPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGGF  251 (254)
T ss_pred             CCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcCE
Confidence            56778889999999999999999999999999888876

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-39  Score=296.99  Aligned_cols=248  Identities=19%  Similarity=0.268  Sum_probs=205.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++| +.+++++..++++..                .+.++.++++|
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   67 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK----------------YGIKAKAYPLN   67 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh----------------cCCceEEEEcC
Confidence            3568999999999999999999999999999998865 566666666666432                23578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCC-----CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      ++|+++++++++++.+.++++|+||||||...     ...++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.|+
T Consensus        68 ~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~  146 (260)
T PRK08416         68 ILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGS  146 (260)
T ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEE
Confidence            99999999999999999999999999998742     13566788899999999999999999999999999876 4689


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||++||. ++..+.+.+..|++||+|+++|+++|+.|++++||+||+|+||+++|++.......  ...      ..+..
T Consensus       147 iv~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~--~~~------~~~~~  217 (260)
T PRK08416        147 IISLSST-GNLVYIENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNY--EEV------KAKTE  217 (260)
T ss_pred             EEEEecc-ccccCCCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCC--HHH------HHHHH
Confidence            9999987 56677788899999999999999999999999999999999999999986432110  010      01111


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ...+.+++..|++++..+.||+++...++++..+..+|++
T Consensus       218 ~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~  257 (260)
T PRK08416        218 ELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGT  257 (260)
T ss_pred             hcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCe
Confidence            2334567788899999999999988888888888877765

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-39  Score=299.94  Aligned_cols=244  Identities=14%  Similarity=0.183  Sum_probs=199.0

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.++.                 .....+++|
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~-----------------~~~~~~~~D   68 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAEL-----------------GAFVAGHCD   68 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhc-----------------CCceEEecC
Confidence            3578999999997  8999999999999999999998873 2333344443321                 124568999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++   +|+||
T Consensus        69 l~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv  145 (272)
T PRK08159         69 VTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSIL  145 (272)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEE
Confidence            999999999999999999999999999998642   256778999999999999999999999999999953   48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.|.+..|++||+|+.+|+++|+.|++++||+||+|+||+++|++......  .+...      ...-..
T Consensus       146 ~iss~-~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~--~~~~~------~~~~~~  216 (272)
T PRK08159        146 TLTYY-GAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGD--FRYIL------KWNEYN  216 (272)
T ss_pred             EEecc-ccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCc--chHHH------HHHHhC
Confidence            99987 5667788899999999999999999999999999999999999999987532110  00000      001113


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|+++.+.||+++...++++..+..+|++.
T Consensus       217 ~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        217 APLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             CcccccCCHHHHHHHHHHHhCccccCccceEEEECCCce
Confidence            456777889999999999999988899999999998874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.7e-39  Score=303.83  Aligned_cols=259  Identities=18%  Similarity=0.152  Sum_probs=201.7

Q ss_pred             ccCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           28 HCKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        28 ~~~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .++++||++|||||  ++|||+++|+.|+++|++|++ +|+.+++++...++.+...........    .........+.
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~   78 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPD----GSLMEITKVYP   78 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhccc----ccccCcCeeee
Confidence            45689999999999  899999999999999999999 889888888877765310000000000    00011245688


Q ss_pred             ccC--CC------------------HHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHH
Q 017635          106 CDV--CE------------------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSI  164 (368)
Q Consensus       106 ~Dv--~~------------------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~  164 (368)
                      +|+  ++                  +++++++++++.+++|++|+||||||... ...++.+.+.++|++++++|+.+++
T Consensus        79 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~  158 (303)
T PLN02730         79 LDAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFV  158 (303)
T ss_pred             cceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHH
Confidence            888  33                  44899999999999999999999998643 1368889999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCccccc
Q 017635          165 LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       165 ~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~  242 (368)
                      .++|.++|+|++   .|+||++||. ++..+.|.+ ..|++||+|+++|+++|+.|+++ +|||||+|+||+|+|++...
T Consensus       159 ~l~~~~~p~m~~---~G~II~isS~-a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~  234 (303)
T PLN02730        159 SLLQHFGPIMNP---GGASISLTYI-ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA  234 (303)
T ss_pred             HHHHHHHHHHhc---CCEEEEEech-hhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence            999999999974   3899999987 556666755 58999999999999999999986 79999999999999998643


Q ss_pred             CcccchhhhhhhhcCCHHHH-HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          243 GSTIQNKQMFNIICELPETV-ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       243 ~~~~~~~~~~~~~~~~pe~~-a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      . ... ...       .+.. ...++.++..|++++..+.||+++...++++..+..+|++..
T Consensus       235 ~-~~~-~~~-------~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        235 I-GFI-DDM-------IEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             c-ccc-HHH-------HHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            1 100 010       1111 122456777889999999999999988899998888887643

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=7.5e-39  Score=293.73  Aligned_cols=246  Identities=19%  Similarity=0.268  Sum_probs=205.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+++.+                 .+.++.++++|
T Consensus         5 ~~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~-----------------~~~~~~~~~~D   65 (253)
T PRK08993          5 AFSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTA-----------------LGRRFLSLTAD   65 (253)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHh-----------------cCCeEEEEECC
Confidence            45788999999999999999999999999999998887642  334444433                 23467889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.++++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++++.+|+||++|
T Consensus        66 l~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~is  144 (253)
T PRK08993         66 LRKIDGIPALLERAVAEFGHIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIA  144 (253)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence            99999999999999999999999999999865 56788899999999999999999999999999998775568999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.+....|++||+|+++++++++.|+.++||+||+|+||+++|++.......  ...      ..+.....+.
T Consensus       145 S~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~--~~~------~~~~~~~~p~  215 (253)
T PRK08993        145 SM-LSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD--EQR------SAEILDRIPA  215 (253)
T ss_pred             ch-hhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc--hHH------HHHHHhcCCC
Confidence            87 56677788899999999999999999999999999999999999999986432110  000      0111223445


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..|++++..+.||+++...+++|..+..||++
T Consensus       216 ~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        216 GRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            67788999999999999999989999888888775

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.8e-39  Score=296.29  Aligned_cols=242  Identities=12%  Similarity=0.102  Sum_probs=193.4

Q ss_pred             CCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|+++||||  ++|||+++|++|+++|++|++++|... .++..+++.++                .+ ...++++|+
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~----------------~~-~~~~~~~Dv   65 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAE----------------FG-SDLVFPCDV   65 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHh----------------cC-CcceeeccC
Confidence            57899999996  689999999999999999999876522 22223333321                11 224689999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---CC-CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KP-LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~-~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|+++++++++++.+++|++|++|||||+....   .+ +.+.+.++|++.+++|+.++++++++++|+|.   +.|+||
T Consensus        66 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~---~~g~Ii  142 (260)
T PRK06997         66 ASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS---DDASLL  142 (260)
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC---CCceEE
Confidence            999999999999999999999999999986421   12 45678899999999999999999999999994   348999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.+.+..|++||+|+++|+++|+.|++++|||||+|+||+|+|++......  ....      ..+..++
T Consensus       143 ~iss~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~--~~~~------~~~~~~~  213 (260)
T PRK06997        143 TLSYL-GAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKD--FGKI------LDFVESN  213 (260)
T ss_pred             EEecc-ccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccc--hhhH------HHHHHhc
Confidence            99987 5667788889999999999999999999999999999999999999986432110  0000      0111223


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++++...|+|+++.+.||+++...++++..+..||++
T Consensus       214 ~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  251 (260)
T PRK06997        214 APLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSGF  251 (260)
T ss_pred             CcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCCh
Confidence            45677888999999999999998888899888888875

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-39  Score=299.73  Aligned_cols=241  Identities=22%  Similarity=0.281  Sum_probs=200.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---------HHHHHHHHHHHHHhhhhhhhcCCCCcccccCce
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS---------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  100 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  100 (368)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.         +++++..+++.+                 .+.+
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------~~~~   65 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVA-----------------AGGE   65 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHh-----------------cCCc
Confidence            36789999999999999999999999999999998876         666666666654                 2456


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-
Q 017635          101 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-  179 (368)
Q Consensus       101 v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-  179 (368)
                      +.++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++++++|+|+++.. 
T Consensus        66 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  144 (286)
T PRK07791         66 AVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKA  144 (286)
T ss_pred             eEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccc
Confidence            788999999999999999999999999999999999876 467889999999999999999999999999999975421 


Q ss_pred             ----CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          180 ----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       180 ----~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                          .|+||++||. ++..+.++...|++||+|+++|+++|+.|++++|||||+|+|| ++|++.....    ....   
T Consensus       145 ~~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~----~~~~---  215 (286)
T PRK07791        145 GRAVDARIINTSSG-AGLQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF----AEMM---  215 (286)
T ss_pred             CCCCCcEEEEeCch-hhCcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH----HHHH---
Confidence                3799999987 5677888999999999999999999999999999999999999 8998753211    0000   


Q ss_pred             cCCHHHHHHHhhh--hhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          256 CELPETVARTLVP--RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       256 ~~~pe~~a~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                             ......  +...|++++..+.||+++...+++|..+..+|++..
T Consensus       216 -------~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        216 -------AKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             -------hcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence                   000111  234677788888899998888888888888887654

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-39  Score=295.01  Aligned_cols=249  Identities=23%  Similarity=0.233  Sum_probs=205.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||++|||+++|++|+++|++|++++|+++++++..+++++                 . .++.++++|++|++++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~-~~~~~~~~Dv~d~~~~   63 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKE-----------------Y-GEVYAVKADLSDKDDL   63 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------c-CCceEEEcCCCCHHHH
Confidence            699999999999999999999999999999999888887777754                 1 2577899999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +++++++.++++++|+||||||... ...++.+.+.++|.+.+++|+.+++.+++.++|.|.++.++|+||++||. ++.
T Consensus        64 ~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~-~~~  142 (259)
T PRK08340         64 KNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSV-SVK  142 (259)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCc-ccC
Confidence            9999999999999999999999753 12456788899999999999999999999999998754457899999987 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC--CHHHHHHHhhhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE--LPETVARTLVPRIR  271 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~pe~~a~~~~~~~~  271 (368)
                      .+.+....|++||+|+++|+++|+.|++++||+||+|+||+++|++.........+........  ..+...+.+++|+.
T Consensus       143 ~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~  222 (259)
T PRK08340        143 EPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTG  222 (259)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCC
Confidence            7788889999999999999999999999999999999999999998642110000000000000  01122344677888


Q ss_pred             hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          272 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       272 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .|+|++..+.||+++...+++|..+..||++
T Consensus       223 ~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        223 RWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             CHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            9999999999999999999999999988876

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=292.29  Aligned_cols=247  Identities=20%  Similarity=0.287  Sum_probs=210.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..++++.                 .+.++..+.+|
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   66 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ-----------------EGIKAHAAPFN   66 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEecC
Confidence            4678899999999999999999999999999999999999888887777754                 23567889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++.+.++++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|.++ +.++||++|
T Consensus        67 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~is  144 (254)
T PRK08085         67 VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKR-QAGKIINIC  144 (254)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEc
Confidence            99999999999999999999999999999865 5778889999999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.+....|+++|+++++++++++.|++++||+||+|+||+++|++.......  +...      .......++
T Consensus       145 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~------~~~~~~~p~  215 (254)
T PRK08085        145 SM-QSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFT------AWLCKRTPA  215 (254)
T ss_pred             cc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHH------HHHHhcCCC
Confidence            87 45667788899999999999999999999999999999999999999986432110  1110      111123456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++..+++++..+.||+++...+++|..+..+|++
T Consensus       216 ~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg~  250 (254)
T PRK08085        216 ARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGGM  250 (254)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            67788899999999999998888898888888775

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.7e-39  Score=293.95  Aligned_cols=241  Identities=13%  Similarity=0.101  Sum_probs=193.3

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           30 KAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        30 ~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ++++|+++||||  ++|||+++|++|+++|++|++++|+.  +.++++.+++                    +.++.+++
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--------------------~~~~~~~~   63 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL--------------------PEPAPVLE   63 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc--------------------CCCCcEEe
Confidence            467899999999  89999999999999999999999864  2233332222                    12467899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      +|++|+++++++++++.+++|++|+||||||+....   .++.+.+.+++++.+++|+.+++.+++.++|+|++   +|+
T Consensus        64 ~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~  140 (256)
T PRK07889         64 LDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGS  140 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---Cce
Confidence            999999999999999999999999999999986411   35677889999999999999999999999999973   479


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      |+++++.  +..+.|.+..|++||+|+++|+++|+.|++++|||||+|+||+++|++...... . ....      ....
T Consensus       141 Iv~is~~--~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~-~-~~~~------~~~~  210 (256)
T PRK07889        141 IVGLDFD--ATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPG-F-ELLE------EGWD  210 (256)
T ss_pred             EEEEeec--ccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccC-c-HHHH------HHHH
Confidence            9999865  345567788899999999999999999999999999999999999997542211 0 0000      0111


Q ss_pred             HHHhhh-hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          263 ARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       263 a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+.+++ ++..|+++++.+.||+++...+.++..+..+|++.
T Consensus       211 ~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        211 ERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             hcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCcee
Confidence            223444 46788999999999999988888888888887763

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=4.7e-38  Score=292.25  Aligned_cols=256  Identities=21%  Similarity=0.290  Sum_probs=212.3

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ..++++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.+++
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~   65 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA-----------------AGGEALAVK   65 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEE
Confidence            344578899999999999999999999999999999999998888777777654                 235788999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC--------------CCCCCCCCHHHHHHHHHhhchHHHHHHHHHH
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG--------------FKPLLQFTNEEIEQIVSTNLVGSILCTREAM  171 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~--------------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l  171 (368)
                      +|++|+++++++++++.++++++|++|||||...+              ..++.+.+.+++++.+++|+.+++.+++.++
T Consensus        66 ~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  145 (278)
T PRK08277         66 ADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFA  145 (278)
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999996432              1346778899999999999999999999999


Q ss_pred             HHHHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh
Q 017635          172 RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM  251 (368)
Q Consensus       172 p~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~  251 (368)
                      |.|+++ +.|+||++||. ++..+.+....|++||+|+++|+++++.|+.++||+||+|+||+|+|++............
T Consensus       146 ~~~~~~-~~g~ii~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~  223 (278)
T PRK08277        146 KDMVGR-KGGNIINISSM-NAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSL  223 (278)
T ss_pred             HHHHhc-CCcEEEEEccc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccc
Confidence            999877 47899999987 5777888899999999999999999999999999999999999999997542111000000


Q ss_pred             hhhhcCCHHHHHHHhhhhhhhcccccceeeeccCH-HHHHHHhhhhhcCCcee
Q 017635          252 FNIICELPETVARTLVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWF  303 (368)
Q Consensus       252 ~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~  303 (368)
                      ..   ...+.....+++++..++|++.++.||+++ ...+++|..+..||++.
T Consensus       224 ~~---~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        224 TE---RANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             hh---HHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCCee
Confidence            00   001122344567888899999999999999 78889999988888764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-38  Score=288.65  Aligned_cols=248  Identities=22%  Similarity=0.307  Sum_probs=207.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ++.+++++|++|||||++|||+++|++|+++|++|++++|+ ++.++..+++.+                 .+.++.+++
T Consensus         8 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~~   69 (258)
T PRK06935          8 MDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEK-----------------EGRKVTFVQ   69 (258)
T ss_pred             cccccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHh-----------------cCCceEEEE
Confidence            34567889999999999999999999999999999999998 555555544433                 235688999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|+++.++++++++++.+.+|++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|+++ +.|+||+
T Consensus        70 ~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~  147 (258)
T PRK06935         70 VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIIN  147 (258)
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEE
Confidence            9999999999999999999999999999999875 5778888999999999999999999999999999877 5689999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. .+..+.+..+.|+++|++++++++++++|+.++||+||+|+||+++|++.......  +..      ..+.....
T Consensus       148 isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~------~~~~~~~~  218 (258)
T PRK06935        148 IASM-LSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD--KNR------NDEILKRI  218 (258)
T ss_pred             ECCH-HhccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC--hHH------HHHHHhcC
Confidence            9987 46667788899999999999999999999999999999999999999975432110  000      01112233


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +.++...+++++..+.||+++...++++..+..+|++
T Consensus       219 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~  255 (258)
T PRK06935        219 PAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGGW  255 (258)
T ss_pred             CCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCe
Confidence            4566778889999999999999888888888887765

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-37  Score=293.12  Aligned_cols=226  Identities=27%  Similarity=0.381  Sum_probs=194.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++.+|+
T Consensus         3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv   65 (330)
T PRK06139          3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA-----------------LGAEVLVVPTDV   65 (330)
T ss_pred             cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeC
Confidence            357889999999999999999999999999999999999999888887765                 345788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+.+|++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|+|+++ +.|+||+++|
T Consensus        66 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS  143 (330)
T PRK06139         66 TDADQVKALATQAASFGGRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMIS  143 (330)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence            9999999999999999999999999999876 6788899999999999999999999999999999987 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CeEEEEEecCcccCcccccCcccchhhh-hhhhcCCHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS-KVGVHTASPGMVLTDLLLSGSTIQNKQM-FNIICELPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~-gI~v~~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~~pe~~a~~~  266 (368)
                      . ++..+.|....|++||+++.+|+++|+.|+.+. ||+|++|+||+++|++..+......... ......+||++|+.+
T Consensus       144 ~-~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i  222 (330)
T PRK06139        144 L-GGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAV  222 (330)
T ss_pred             h-hhcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHH
Confidence            7 577788899999999999999999999999875 9999999999999998754221111111 112235799999999


Q ss_pred             hhhhhhcc
Q 017635          267 VPRIRVVK  274 (368)
Q Consensus       267 ~~~~~~~~  274 (368)
                      +..+..++
T Consensus       223 l~~~~~~~  230 (330)
T PRK06139        223 VRLADRPR  230 (330)
T ss_pred             HHHHhCCC
Confidence            88776544

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-38  Score=290.93  Aligned_cols=252  Identities=23%  Similarity=0.233  Sum_probs=202.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +.+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~   61 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF--------------------GDHVLVVEGDV   61 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCcceEEEccC
Confidence            3468899999999999999999999999999999999988776554432                    23577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHH----HHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE----IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~----~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|+++++++++++.+.++++|+||||||+.....++.+.+.++    |++++++|+.+++.+++.++|.|+++  +|+||
T Consensus        62 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv  139 (263)
T PRK06200         62 TSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMI  139 (263)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEE
Confidence            9999999999999999999999999999864235566666665    89999999999999999999998765  58999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH-HHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE-TVA  263 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe-~~a  263 (368)
                      +++|. ++..+.++...|++||+|+++|+++++.|+++. ||||+|+||+|+|++....................+ ...
T Consensus       140 ~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T PRK06200        140 FTLSN-SSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAA  217 (263)
T ss_pred             EECCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhc
Confidence            99987 566677788899999999999999999999885 999999999999998643211000000000000011 112


Q ss_pred             HHhhhhhhhcccccceeeeccCHH-HHHHHhhhhhcCCceec
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWFD  304 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~~  304 (368)
                      ..+++++..|+|++..+.||+++. ..+++|..+..||++.-
T Consensus       218 ~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG~~~  259 (263)
T PRK06200        218 ITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGGLGI  259 (263)
T ss_pred             CCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCceee
Confidence            346678889999999999999998 88999999999988743

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=4.9e-38  Score=289.74  Aligned_cols=249  Identities=20%  Similarity=0.232  Sum_probs=197.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.++++++.++                    .+.++.++++|+
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~--------------------~~~~~~~~~~D~   60 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA--------------------HGDAVVGVEGDV   60 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh--------------------cCCceEEEEecc
Confidence            457899999999999999999999999999999999998766543321                    124678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCH----HHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN----EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~----~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|.++++++++++.++++++|+||||||......++.+.+.    ++|++.+++|+.+++.++++++|.|.++  +|+||
T Consensus        61 ~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv  138 (262)
T TIGR03325        61 RSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVI  138 (262)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEE
Confidence            99999999999999999999999999997532234444443    5799999999999999999999999865  37888


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH--
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV--  262 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~--  262 (368)
                      +++|. .+..+.+....|++||+|+++|+++++.|++++ |+||+|+||+++|++................  ..++.  
T Consensus       139 ~~sS~-~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~--~~~~~~~  214 (262)
T TIGR03325       139 FTISN-AGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTV--PLGDMLK  214 (262)
T ss_pred             EEecc-ceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCcccccccccccccccc--chhhhhh
Confidence            88876 566677788899999999999999999999987 9999999999999986432110000000000  11121  


Q ss_pred             HHHhhhhhhhcccccceeeeccCHH-HHHHHhhhhhcCCcee
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  303 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  303 (368)
                      ...+++|+..|++++..+.||+++. ..++++..+..||++.
T Consensus       215 ~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       215 SVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             hcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCCee
Confidence            2346788889999999999999874 5678898888888864

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-38  Score=285.82  Aligned_cols=248  Identities=22%  Similarity=0.328  Sum_probs=206.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   65 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA-----------------AGGKAEALACH   65 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcC
Confidence            3578899999999999999999999999999999999998888877777754                 23467789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++.++++++++++.+.++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|+|+++ +.++|+++|
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~s  144 (252)
T PRK07035         66 IGEMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQ-GGGSIVNVA  144 (252)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCcEEEEEC
Confidence            9999999999999999999999999999975434667788999999999999999999999999999876 578999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.++.+.|++||+++++|+++++.|+.++||+|++|+||+|+|++.......  ....      ++.....+.
T Consensus       145 S~-~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~------~~~~~~~~~  215 (252)
T PRK07035        145 SV-NGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN--DAIL------KQALAHIPL  215 (252)
T ss_pred             ch-hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC--HHHH------HHHHccCCC
Confidence            87 56677788899999999999999999999999999999999999999986432211  1111      111222345


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+...|+++++.+.||+++...+.++..+..+|++
T Consensus       216 ~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg~  250 (252)
T PRK07035        216 RRHAEPSEMAGAVLYLASDASSYTTGECLNVDGGY  250 (252)
T ss_pred             CCcCCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            56677888888888999888777777777666654

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=286.81  Aligned_cols=241  Identities=20%  Similarity=0.280  Sum_probs=202.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~   62 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL--------------------GERARFIATDIT   62 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCeeEEEEecCC
Confidence            467899999999999999999999999999999999987766655443                    246788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++.+.+.++++|+||||||... ... .+.+.++|++.+++|+.+++.+++.++|+|+ + ++|+||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~g~id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~g~ii~isS~  138 (261)
T PRK08265         63 DDAAIERAVATVVARFGRVDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-R-GGGAIVNFTSI  138 (261)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-c-CCcEEEEECch
Confidence            999999999999999999999999999864 233 3578899999999999999999999999998 4 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH--HHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--RTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a--~~~~  267 (368)
                       ++..+.+....|+++|+++++++++++.|+.++||+||+|+||+++|++...........        .+...  ..++
T Consensus       139 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~--------~~~~~~~~~p~  209 (261)
T PRK08265        139 -SAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAK--------ADRVAAPFHLL  209 (261)
T ss_pred             -hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhH--------HHHhhcccCCC
Confidence             567778888999999999999999999999999999999999999999864321110000        11111  2356


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++..|++++..+.||+++...+++++.+..||++.
T Consensus       210 ~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg~~  245 (261)
T PRK08265        210 GRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGGYS  245 (261)
T ss_pred             CCccCHHHHHHHHHHHcCccccCccCcEEEECCCee
Confidence            677888999999999999988899999999988874

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.4e-37  Score=291.56  Aligned_cols=244  Identities=20%  Similarity=0.271  Sum_probs=201.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ++++|++|||||++|||+++|++|+++|++|++.+|+.  +..+++.+.+.+                 .+.++.++.+|
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  108 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEE-----------------CGRKAVLLPGD  108 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHH-----------------cCCeEEEEEcc
Confidence            47889999999999999999999999999999988753  334444333322                 23567889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+.+|++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+|++   +++||++|
T Consensus       109 l~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iS  185 (294)
T PRK07985        109 LSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTS  185 (294)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEEC
Confidence            999999999999999999999999999997543467888999999999999999999999999999963   47999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++......  ....      .++.....++
T Consensus       186 S~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~--~~~~------~~~~~~~~~~  256 (294)
T PRK07985        186 SI-QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ--TQDK------IPQFGQQTPM  256 (294)
T ss_pred             Cc-hhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC--CHHH------HHHHhccCCC
Confidence            87 5667778889999999999999999999999999999999999999998532110  0110      0112223456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..|++++..+.||+++...++++..+..+|++
T Consensus       257 ~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        257 KRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             CCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            67788999999999999999888888888887765

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.6e-38  Score=289.41  Aligned_cols=233  Identities=27%  Similarity=0.431  Sum_probs=203.8

Q ss_pred             cCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHHHH
Q 017635           40 GST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKL  117 (368)
Q Consensus        40 Gas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~  117 (368)
                      |++  +|||+++|++|+++|++|++++|+.+++++..+++.++.                +.+  ++++|++++++++++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~----------------~~~--~~~~D~~~~~~v~~~   62 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEY----------------GAE--VIQCDLSDEESVEAL   62 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHT----------------TSE--EEESCTTSHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHc----------------CCc--eEeecCcchHHHHHH
Confidence            666  999999999999999999999999999888888887653                233  499999999999999


Q ss_pred             HHHHHhHc-CCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          118 SNFAVNEF-GSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       118 ~~~i~~~~-g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++.+++ |+||+||||+|...+   ..++.+.+.++|++.+++|+.+++.++|+++|+|++   +|+||++||. ++.
T Consensus        63 ~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~-~~~  138 (241)
T PF13561_consen   63 FDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSI-AAQ  138 (241)
T ss_dssp             HHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEG-GGT
T ss_pred             HHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccch-hhc
Confidence            99999999 999999999998763   367888999999999999999999999999998875   4899999987 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      .+.+++..|+++|+|+++|+++|+.|+++ +|||||+|+||+++|++......  .+++      ......+.+++++..
T Consensus       139 ~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~--~~~~------~~~~~~~~pl~r~~~  210 (241)
T PF13561_consen  139 RPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPG--NEEF------LEELKKRIPLGRLGT  210 (241)
T ss_dssp             SBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHT--HHHH------HHHHHHHSTTSSHBE
T ss_pred             ccCccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhcccc--ccch------hhhhhhhhccCCCcC
Confidence            77889999999999999999999999999 99999999999999998532211  1111      233456678899999


Q ss_pred             cccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          273 VKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      |+|++.++.||+++...+++|+.+..||++
T Consensus       211 ~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  211 PEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             HHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             HHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            999999999999999999999999999986

...

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=1.7e-37  Score=284.97  Aligned_cols=251  Identities=20%  Similarity=0.333  Sum_probs=207.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++...++.+                 .+.++.++++|++|++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~~   64 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK-----------------DGGKAIAVKADVSDRD   64 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCCCHH
Confidence            68999999999999999999999999999999999888877777654                 2356788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+++.|++.+.+++||++||. .+
T Consensus        65 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~  142 (256)
T PRK08643         65 QVFAAVRQVVDTFGDLNVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQ-AG  142 (256)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcc-cc
Confidence            999999999999999999999999865 5778888999999999999999999999999999876456899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh-cCCHHHHHHHhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII-CELPETVARTLVPRIR  271 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~pe~~a~~~~~~~~  271 (368)
                      ..+.++...|+++|++++.|++.++.|+.++||+|++|+||+++|++................ ........+.+.+++.
T Consensus       143 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (256)
T PRK08643        143 VVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS  222 (256)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence            677788899999999999999999999999999999999999999986432110000000000 0001122234456677


Q ss_pred             hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          272 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       272 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..+.||+++...+++|..+..||++
T Consensus       223 ~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~  253 (256)
T PRK08643        223 EPEDVANCVSFLAGPDSDYITGQTIIVDGGM  253 (256)
T ss_pred             CHHHHHHHHHHHhCccccCccCcEEEeCCCe
Confidence            8889999999999999888888888888765

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-37  Score=282.96  Aligned_cols=240  Identities=23%  Similarity=0.277  Sum_probs=196.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|+++||||++|||+++|++|+++|++|++.. |+.++.++...++..                 .+.++..+.+|++
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-----------------NGGSAFSIGANLE   64 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEecccC
Confidence            4689999999999999999999999999999875 666777666666654                 2346778999999


Q ss_pred             CHHHHHHHHHHHHhH----cC--CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          110 EPADVQKLSNFAVNE----FG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~----~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +.++++.+++++.+.    ++  ++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|++   .|+|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~i  140 (252)
T PRK12747         65 SLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRI  140 (252)
T ss_pred             CHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeE
Confidence            999999999887653    34  8999999999865 567888999999999999999999999999999964   4799


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.++...|++||+|+++++++++.|+.++||+||+|+||+|+|++......  .+.        .+...
T Consensus       141 v~isS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~--~~~--------~~~~~  209 (252)
T PRK12747        141 INISSA-ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS--DPM--------MKQYA  209 (252)
T ss_pred             EEECCc-ccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc--CHH--------HHHHH
Confidence            999988 5677788889999999999999999999999999999999999999998643211  000        01111


Q ss_pred             H--HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 R--TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .  .+.+++..|++++..+.||+++...++++..+..+|++
T Consensus       210 ~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        210 TTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             HhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            1  13466778889999999999988777788777777654

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.5e-37  Score=285.92  Aligned_cols=243  Identities=19%  Similarity=0.261  Sum_probs=199.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.                            .++.+++||++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------------------------~~~~~~~~D~~   54 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------------------------NDVDYFKVDVS   54 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------------------------CceEEEEccCC
Confidence            57899999999999999999999999999999999985421                            24778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.++++++|+||||||... ..++.+.+.++|++.+++|+.|++.+++.++|+|+++ +.|+||++||.
T Consensus        55 ~~~~i~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~  132 (258)
T PRK06398         55 NKEQVIKGIDYVISKYGRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASV  132 (258)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcc
Confidence            999999999999999999999999999875 5788899999999999999999999999999999876 57899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC-CHHHHHHHhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPETVARTLVP  268 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~pe~~a~~~~~  268 (368)
                       ++..+.+....|++||+|+++|+++++.|+.+. |+||+|+||+++|++.................. ..+.....+++
T Consensus       133 -~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (258)
T PRK06398        133 -QSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMK  210 (258)
T ss_pred             -hhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcC
Confidence             566778889999999999999999999999876 999999999999998643211000000000000 00011223456


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ++..|++++..+.||+++...+.++..+..+|+..-
T Consensus       211 ~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        211 RVGKPEEVAYVVAFLASDLASFITGECVTVDGGLRA  246 (258)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcccc
Confidence            777889999999999998887888888877777643

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5e-39  Score=264.88  Aligned_cols=240  Identities=22%  Similarity=0.254  Sum_probs=211.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++.|+++++||+..|||+++++.|++.|++|+.++|+++.+..+.++.                    ...+..+..|++
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~--------------------p~~I~Pi~~Dls   63 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET--------------------PSLIIPIVGDLS   63 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC--------------------CcceeeeEeccc
Confidence            578999999999999999999999999999999999999998877763                    345889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +++.+.+.+..    .+++|.|+||||+.. ..|+.+++.++|++.|++|+.++++++|.....+..+..+|.|+|+||.
T Consensus        64 ~wea~~~~l~~----v~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSq  138 (245)
T KOG1207|consen   64 AWEALFKLLVP----VFPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQ  138 (245)
T ss_pred             HHHHHHHhhcc----cCchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecch
Confidence            98887776543    478999999999987 6899999999999999999999999999988877776678999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+......||++|+|+++++++|+.|+++++||||+|.|-.|.|+|.++......+        .-...++.+++|
T Consensus       139 -as~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--------~k~mL~riPl~r  209 (245)
T KOG1207|consen  139 -ASIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--------KKKMLDRIPLKR  209 (245)
T ss_pred             -hcccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--------ccchhhhCchhh
Confidence             67788889999999999999999999999999999999999999999998765443222        123356788899


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..++++.+++.||.|+...+.+|..+..+|++.
T Consensus       210 FaEV~eVVnA~lfLLSd~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  210 FAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             hhHHHHHHhhheeeeecCcCcccCceeeecCCcc
Confidence            9999999999999999999999999988888763

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-37  Score=281.68  Aligned_cols=248  Identities=25%  Similarity=0.351  Sum_probs=206.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||.++|++|+++|++|++++|+.+++++..+++++                 .+.++.++.+|+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   65 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE-----------------AGGEALFVACDV   65 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCC
Confidence            457899999999999999999999999999999999999888777776654                 345688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+.+|++|++|||||......++.+.+.+++++.+++|+.+++.++++++|.|.++ +.++|+++||
T Consensus        66 ~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS  144 (253)
T PRK06172         66 TRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTAS  144 (253)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            999999999999999999999999999986533457788999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.++...|++||+++++|+++++.|+.++||+|++|+||+|+|++........ .....      ......+..
T Consensus       145 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~------~~~~~~~~~  216 (253)
T PRK06172        145 V-AGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEAD-PRKAE------FAAAMHPVG  216 (253)
T ss_pred             h-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccC-hHHHH------HHhccCCCC
Confidence            7 566778889999999999999999999999999999999999999999865321100 00000      001123345


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++..|++++..+.||+++...+.+|..+..||++
T Consensus       217 ~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg~  250 (253)
T PRK06172        217 RIGKVEEVASAVLYLCSDGASFTTGHALMVDGGA  250 (253)
T ss_pred             CccCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            6678888888899999888777777777766654

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-37  Score=284.15  Aligned_cols=247  Identities=23%  Similarity=0.239  Sum_probs=203.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++|||+++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++.+|+
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~   66 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA----------------HGVDVAVHALDL   66 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCceEEEEecC
Confidence            4578999999999999999999999999999999999998888777777542                234678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++.    ++++|++|||||... ..++.+.+.++|++++++|+.+++++++.++|.|+++ +.|+||++||
T Consensus        67 ~~~~~~~~~~~~----~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss  140 (259)
T PRK06125         67 SSPEAREQLAAE----AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG  140 (259)
T ss_pred             CCHHHHHHHHHH----hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence            999999888754    589999999999875 5788899999999999999999999999999999876 4689999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH----HHHH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----TVAR  264 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~~a~  264 (368)
                      . .+..+.+.+..|+++|+|+++|+++++.|+.++||+||+|+||+++|++............+    ..++    ...+
T Consensus       141 ~-~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~~~~~~  215 (259)
T PRK06125        141 A-AGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAEL----GDESRWQELLAG  215 (259)
T ss_pred             c-cccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhccc----CCHHHHHHHhcc
Confidence            7 46667777889999999999999999999999999999999999999975321110000000    0111    1123


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..+++++..+.||+++...+.+|..+..+|++
T Consensus       216 ~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~  253 (259)
T PRK06125        216 LPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGI  253 (259)
T ss_pred             CCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCe
Confidence            34567778899999999999998888888888888775

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-37  Score=282.08  Aligned_cols=246  Identities=28%  Similarity=0.414  Sum_probs=198.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++.   .+++++                   ..+.++++|+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~-------------------~~~~~~~~Dl   60 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELRE-------------------KGVFTIKCDV   60 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHh-------------------CCCeEEEecC
Confidence            467899999999999999999999999999999987765432   223322                   1367899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||
T Consensus        61 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS  138 (255)
T PRK06463         61 GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIAS  138 (255)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            9999999999999999999999999999865 5678888999999999999999999999999999876 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch-hhhhhhhcCCHHHHHHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELPETVARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~pe~~a~~~~  267 (368)
                      ..+...+.++...|++||+|+++|+++++.|+.++||+||+|+||+++|++......... ....      .....+.++
T Consensus       139 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~  212 (255)
T PRK06463        139 NAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLR------ELFRNKTVL  212 (255)
T ss_pred             HHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHH------HHHHhCCCc
Confidence            733323456778999999999999999999999999999999999999998643211100 0000      011122345


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +++..|++++..+.||+++...+.+|..+..+|+...
T Consensus       213 ~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg~~~  249 (255)
T PRK06463        213 KTTGKPEDIANIVLFLASDDARYITGQVIVADGGRID  249 (255)
T ss_pred             CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCCeee
Confidence            6667788888888999988887888888887776643

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=273.30  Aligned_cols=190  Identities=15%  Similarity=0.140  Sum_probs=170.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++..+++|+
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~-----------------~~~~~~~~~~D~   63 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA-----------------LTDNVYSFQLKD   63 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCCeEEEEccC
Confidence            467899999999999999999999999999999999999998888877755                 235677899999


Q ss_pred             CCHHHHHHHHHHHHhHcC-CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g-~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +|+++++++++++.+++| ++|++|||||......++.+.+.+++.+.+++|+.+++.+++.++|+|++++++|+||++|
T Consensus        64 ~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~is  143 (227)
T PRK08862         64 FSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVI  143 (227)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence            999999999999999999 9999999998654356788999999999999999999999999999998764578999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      |. .+   .+.+..|++||+|+.+|+++|+.|++++|||||+|+||+++|+.
T Consensus       144 S~-~~---~~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~  191 (227)
T PRK08862        144 SH-DD---HQDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG  191 (227)
T ss_pred             cC-CC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence            86 22   35678999999999999999999999999999999999999983

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-36  Score=279.16  Aligned_cols=224  Identities=25%  Similarity=0.368  Sum_probs=191.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..++++.                 .+.++.++.+|++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~-----------------~~~~~~~~~~Dv~   65 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA-----------------EGFDVHGVMCDVR   65 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEeCCCC
Confidence            36789999999999999999999999999999999999888887777754                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+++|++|+||||||+.. ..++.+.+.+++++.+++|+.|++.+++.++|.|.+++.+|+||++||.
T Consensus        66 d~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~  144 (275)
T PRK05876         66 HREEVTHLADEAFRLLGHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASF  144 (275)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCh
Confidence            999999999999999999999999999876 5788899999999999999999999999999999877557899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch------------hhh-hhhhc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN------------KQM-FNIIC  256 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~------------~~~-~~~~~  256 (368)
                       ++..+.++...|++||+++.+|+++|+.|+.++||+|++|+||+++|++.........            ... .....
T Consensus       145 -~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (275)
T PRK05876        145 -AGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDN  223 (275)
T ss_pred             -hhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccC
Confidence             5677888899999999999999999999999999999999999999998643211000            000 00112


Q ss_pred             CCHHHHHHHhhhhhhh
Q 017635          257 ELPETVARTLVPRIRV  272 (368)
Q Consensus       257 ~~pe~~a~~~~~~~~~  272 (368)
                      .+|+++|+.++..+..
T Consensus       224 ~~~~dva~~~~~ai~~  239 (275)
T PRK05876        224 LGVDDIAQLTADAILA  239 (275)
T ss_pred             CCHHHHHHHHHHHHHc
Confidence            4799999998877753

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=5.2e-37  Score=288.59  Aligned_cols=244  Identities=22%  Similarity=0.292  Sum_probs=200.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ++++|++|||||++|||+++|++|+++|++|+++.++.+  ..++..+++++                 .+.++.++.||
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  114 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQA-----------------EGRKAVALPGD  114 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHH-----------------cCCeEEEEecC
Confidence            477899999999999999999999999999999887643  33444444433                 24568889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+.++++|+||||||......++.+.+.+++++.+++|+.|+++++++++|+|.+   +++||++|
T Consensus       115 l~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~s  191 (300)
T PRK06128        115 LKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTG  191 (300)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEEC
Confidence            999999999999999999999999999998643467888999999999999999999999999999863   47999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.+....|++||+|+++|+++|+.|+.++||+||+|+||+++|++...... ..+..       ++.....++
T Consensus       192 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~-~~~~~-------~~~~~~~p~  262 (300)
T PRK06128        192 SI-QSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQ-PPEKI-------PDFGSETPM  262 (300)
T ss_pred             Cc-cccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCC-CHHHH-------HHHhcCCCC
Confidence            87 5667778889999999999999999999999999999999999999998532110 01100       111123456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.||+++...+.++..+..+|+.
T Consensus       263 ~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        263 KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCE
Confidence            67778889999999999988777788777777654

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=6.2e-37  Score=279.74  Aligned_cols=245  Identities=22%  Similarity=0.307  Sum_probs=199.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..  ++..+++++                 .+.++.++++|++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~-----------------~~~~~~~~~~D~~   62 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEA-----------------LGRRFLSLTADLS   62 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHh-----------------cCCceEEEECCCC
Confidence            578999999999999999999999999999999999752  233333332                 2346888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++..|+||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~  141 (248)
T TIGR01832        63 DIEAIKALVDSAVEEFGHIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASM  141 (248)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecH
Confidence            999999999999999999999999999876 4677788999999999999999999999999999876446899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       .+..+.+....|++||++++++++++++|+.++||+||+|+||+|+|++.......  ...      ..+...+.+..+
T Consensus       142 -~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~------~~~~~~~~~~~~  212 (248)
T TIGR01832       142 -LSFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD--EDR------NAAILERIPAGR  212 (248)
T ss_pred             -HhccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC--hHH------HHHHHhcCCCCC
Confidence             45566777889999999999999999999999999999999999999976432110  000      011122233456


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...+++++..+.||+++...+.+|..+..||++.
T Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       213 WGTPDDIGGPAVFLASSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             CcCHHHHHHHHHHHcCccccCcCCcEEEeCCCEe
Confidence            6778888888889998887777888777777653

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-37  Score=282.47  Aligned_cols=257  Identities=20%  Similarity=0.284  Sum_probs=206.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .++++++|+++||||++|||+++|++|+++|++|++++|+.+++++..++++.                 .+.++.++++
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   66 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE-----------------LGIEAHGYVC   66 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEc
Confidence            45678899999999999999999999999999999999999888777766654                 3457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.+.++++|+||||||... ..++.+.+.+++++++++|+.+++.+++.++|+|+++ +.++||++
T Consensus        67 Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~i  144 (265)
T PRK07097         67 DVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINI  144 (265)
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999876 5778889999999999999999999999999999876 57899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. .+..+.+....|+++|++++++++++++|+.++||+|++|+||+++|++...............+  ........+
T Consensus       145 sS~-~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~  221 (265)
T PRK07097        145 CSM-MSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPF--DQFIIAKTP  221 (265)
T ss_pred             cCc-cccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhH--HHHHHhcCC
Confidence            987 45667788899999999999999999999999999999999999999976432110000000000  000011223


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      ..++..|++++..+.|+.++....+++..+..+|++...
T Consensus       222 ~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~  260 (265)
T PRK07097        222 AARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGILAY  260 (265)
T ss_pred             ccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCceec
Confidence            445566777888888888776666667766666665433

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=5.1e-36  Score=273.91  Aligned_cols=214  Identities=20%  Similarity=0.243  Sum_probs=183.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||+++|++|+ +|++|++++|+.++++++.+++++.                .+..+.+++||++|+++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~~~   63 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR----------------GATSVHVLSFDAQDLDT   63 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc----------------cCCceEEEEcccCCHHH
Confidence            579999999999999999999 5999999999999998888887652                12347789999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.+.+|++|++|||||... ..+..+.+.+++.+.+++|+.+++.+++.++|.|.+++++|+||++||. ++.
T Consensus        64 v~~~~~~~~~~~g~id~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~  141 (246)
T PRK05599         64 HRELVKQTQELAGEISLAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSI-AGW  141 (246)
T ss_pred             HHHHHHHHHHhcCCCCEEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecc-ccc
Confidence            99999999999999999999999865 3455667778889999999999999999999999876446899999987 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  273 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~  273 (368)
                      .+.++...|++||+|+++|+++|+.|++++||+||+++||+|+|++.......       ....+||++|+.++..+...
T Consensus       142 ~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~~-------~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        142 RARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKPA-------PMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             cCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCCC-------CCCCCHHHHHHHHHHHHhcC
Confidence            77888999999999999999999999999999999999999999986432110       11247999999999877653

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-37  Score=280.22  Aligned_cols=246  Identities=22%  Similarity=0.267  Sum_probs=207.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||+++|++|+++|++|++.+|+++++++..+++++                 .+.++.++++|+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-----------------~~~~~~~~~~D~   68 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG-----------------QGLSAHALAFDV   68 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCceEEEEEccC
Confidence            467899999999999999999999999999999999999888777666644                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.+.|.++ +.|+||++||
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss  146 (255)
T PRK07523         69 TDHDAVRAAIDAFEAEIGPIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIAS  146 (255)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEcc
Confidence            9999999999999999999999999999876 5788889999999999999999999999999999876 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ....+.++...|+++|+++++++++++.|++++||+||+|+||+++|++.......  ....      +......+++
T Consensus       147 ~-~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~------~~~~~~~~~~  217 (255)
T PRK07523        147 V-QSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFS------AWLEKRTPAG  217 (255)
T ss_pred             c-hhccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHH------HHHHhcCCCC
Confidence            7 46677788999999999999999999999999999999999999999985432110  0000      1111233456


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +...++|++..+.||+++...++++..+..+|+.
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  251 (255)
T PRK07523        218 RWGKVEELVGACVFLASDASSFVNGHVLYVDGGI  251 (255)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCcEEEECCCe
Confidence            7778889999999999988777777777666653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=280.48  Aligned_cols=246  Identities=25%  Similarity=0.365  Sum_probs=205.7

Q ss_pred             cCCCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTR-GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~-GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..+++|+++||||++ |||+++++.|+++|++|++++|+.+++++..+++++..               ...++.++++|
T Consensus        13 ~~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D   77 (262)
T PRK07831         13 GLLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAEL---------------GLGRVEAVVCD   77 (262)
T ss_pred             cccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhc---------------CCceEEEEEcc
Confidence            345789999999985 99999999999999999999999988887777775421               12468889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++++++++++++++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++++..|+|++++
T Consensus        78 l~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~s  156 (262)
T PRK07831         78 VTSEAQVDALIDAAVERLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNA  156 (262)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            99999999999999999999999999999865 57788899999999999999999999999999998764378999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.++...|+++|+|+++++++++.|++++||+||+|+||+++|++......   .....      +...+.++
T Consensus       157 s~-~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~---~~~~~------~~~~~~~~  226 (262)
T PRK07831        157 SV-LGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS---AELLD------ELAAREAF  226 (262)
T ss_pred             ch-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC---HHHHH------HHHhcCCC
Confidence            86 5666778889999999999999999999999999999999999999998643211   11110      11112345


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCC
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  300 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  300 (368)
                      ++...|+++++.+.||+++...+++|..+..++
T Consensus       227 ~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        227 GRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             CCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            677788999999999999988788877776665

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.2e-37  Score=281.10  Aligned_cols=240  Identities=20%  Similarity=0.260  Sum_probs=195.0

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCC-----------hHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           30 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRS-----------SESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        30 ~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      ++++|+++||||+  +|||+++|++|+++|++|++++|+           .++.++..+++++                 
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   65 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-----------------   65 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-----------------
Confidence            5789999999999  499999999999999999998643           2222233333332                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++++|++|.++++++++++.+.+|++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+
T Consensus        66 ~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~  144 (256)
T PRK12859         66 NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK  144 (256)
T ss_pred             cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh
Confidence            3467889999999999999999999999999999999999865 577889999999999999999999999999999987


Q ss_pred             CCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhc
Q 017635          177 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  256 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  256 (368)
                      + +.|+||++||. ++..+.+++..|++||+++++|+++++.|+.++||+||+|+||+++|++....   ....+     
T Consensus       145 ~-~~g~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~---~~~~~-----  214 (256)
T PRK12859        145 K-SGGRIINMTSG-QFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEE---IKQGL-----  214 (256)
T ss_pred             c-CCeEEEEEccc-ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHH---HHHHH-----
Confidence            6 47899999987 56777888999999999999999999999999999999999999999864311   00000     


Q ss_pred             CCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          257 ELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       257 ~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                           ....+.+++..|++++..+.||+++...+++|..+..||++
T Consensus       215 -----~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        215 -----LPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             -----HhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCc
Confidence                 01123445566777777778888877767777777776653

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=1.8e-36  Score=278.31  Aligned_cols=248  Identities=25%  Similarity=0.378  Sum_probs=205.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++....               .+.++.++.+|
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D   68 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEF---------------PEREVHGLAAD   68 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCCeEEEEECC
Confidence            346789999999999999999999999999999999999988888777775421               24578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|+++ +.++||++|
T Consensus        69 l~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~s  146 (257)
T PRK09242         69 VSDDEDRRAILDWVEDHWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIG  146 (257)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEEC
Confidence            99999999999999999999999999999865 5677889999999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|+++|++++.++++++.|+.++||+|++|+||+++|++.......  +...      .+...+.+.
T Consensus       147 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--~~~~------~~~~~~~~~  217 (257)
T PRK09242        147 SV-SGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--PDYY------EQVIERTPM  217 (257)
T ss_pred             cc-ccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--hHHH------HHHHhcCCC
Confidence            87 56677788899999999999999999999999999999999999999986432111  1100      111223345


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      .++..+++++..+.||+++...+.++..+..+|+
T Consensus       218 ~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        218 RRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             CCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            5666788888888888887665666666666654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=277.51  Aligned_cols=246  Identities=25%  Similarity=0.347  Sum_probs=203.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +..++..++++.                 .+.++.++.+|+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl   66 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK-----------------AGGEAIAVKGDV   66 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCeEEEEEecC
Confidence            57899999999999999999999999999999998854 445555555543                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|.+++..|+||++||
T Consensus        67 ~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS  145 (261)
T PRK08936         67 TVESDVVNLIQTAVKEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSS  145 (261)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            9999999999999999999999999999876 467778899999999999999999999999999987755789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.+....|+++|+|+++|+++++.|+.++||+|++|+||+++|++.......  ....      .......+++
T Consensus       146 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~------~~~~~~~~~~  216 (261)
T PRK08936        146 V-HEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFAD--PKQR------ADVESMIPMG  216 (261)
T ss_pred             c-cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCC--HHHH------HHHHhcCCCC
Confidence            7 56677888899999999999999999999999999999999999999985432110  0000      0011123455


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++..++++++.+.||+++...+.++..+..+|+.
T Consensus       217 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g~  250 (261)
T PRK08936        217 YIGKPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCccCcEEEECCCc
Confidence            6777888889999999988878888777777654

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.3e-36  Score=277.47  Aligned_cols=247  Identities=21%  Similarity=0.342  Sum_probs=205.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+.+..++..++++.                 .+.++.++.+
T Consensus         5 ~~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   67 (255)
T PRK06113          5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACRC   67 (255)
T ss_pred             cccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            34567899999999999999999999999999999999998888877777654                 2356888999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++.+.+.++++|++|||||... ..++ +.+.+++++.+++|+.+++++++.++|+|.+. +.++||++
T Consensus        68 D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~i  144 (255)
T PRK06113         68 DITSEQELSALADFALSKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTI  144 (255)
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999865 3444 67889999999999999999999999999865 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++...|++||+|+++|++++++++.++||+||+|+||+++|++......   ....      .+.....+
T Consensus       145 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~------~~~~~~~~  214 (255)
T PRK06113        145 TSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIE------QKMLQHTP  214 (255)
T ss_pred             ecc-cccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC---HHHH------HHHHhcCC
Confidence            987 5667778889999999999999999999999999999999999999998643211   0000      01112233


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +.++..|++++..+.||+++...+.+|..+..+|++.
T Consensus       215 ~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg~~  251 (255)
T PRK06113        215 IRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcc
Confidence            4566778888888899998888778888887777643

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.9e-36  Score=281.77  Aligned_cols=253  Identities=21%  Similarity=0.273  Sum_probs=199.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++.                  .+.++.++++|+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl   75 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG------------------GEPNVCFFHCDV   75 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc------------------CCCceEEEEeec
Confidence            46789999999999999999999999999999999999877665555442                  124688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +|.++++++++.+.+++|++|+||||||.... ..++.+.+.+++++++++|+.|+++++++++|.|.++ +.|+|++++
T Consensus        76 ~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~is  154 (280)
T PLN02253         76 TVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLC  154 (280)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEec
Confidence            99999999999999999999999999998542 2457788999999999999999999999999999876 468999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH-HHh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-RTL  266 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~~~  266 (368)
                      |. ++..+.+....|++||+|+++++++++.|++++||+||+++||+++|++......... .....+....+... ...
T Consensus       155 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  232 (280)
T PLN02253        155 SV-ASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDE-RTEDALAGFRAFAGKNAN  232 (280)
T ss_pred             Ch-hhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccccccccccccc-chhhhhhhhHHHhhcCCC
Confidence            87 4556667778999999999999999999999999999999999999997533211100 00000000000000 011


Q ss_pred             -hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 -VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                       ..+...++|++..+.|++++...++++..+..+|++
T Consensus       233 l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~  269 (280)
T PLN02253        233 LKGVELTVDDVANAVLFLASDEARYISGLNLMIDGGF  269 (280)
T ss_pred             CcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCch
Confidence             123356788889999999988888888888877765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=279.56  Aligned_cols=244  Identities=22%  Similarity=0.265  Sum_probs=199.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.++.+                          ..++.++++|
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------------------------~~~~~~~~~D   57 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------------------------HENYQFVPTD   57 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------------------------cCceEEEEcc
Confidence            35678999999999999999999999999999999999875431                          1357789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC--------CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF--------KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~--------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      ++|+++++++++++.++++++|++|||||...+.        .++.+.+.++|++++++|+.+++.++++++|+|+++ +
T Consensus        58 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~  136 (266)
T PRK06171         58 VSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-H  136 (266)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-C
Confidence            9999999999999999999999999999975421        123467899999999999999999999999999876 5


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-CcccccCcccchhhhhhhhcCC
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      .++||++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++ |++.......   .........
T Consensus       137 ~g~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~---~~~~~~~~~  212 (266)
T PRK06171        137 DGVIVNMSSE-AGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEE---ALAYTRGIT  212 (266)
T ss_pred             CcEEEEEccc-cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhh---hhccccCCC
Confidence            6899999987 5667778889999999999999999999999999999999999997 6653211100   000000001


Q ss_pred             HHHH-----H--HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          259 PETV-----A--RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       259 pe~~-----a--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++.     .  ..+++++..|+|++.++.||+++...++++..+..||++
T Consensus       213 ~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg~  263 (266)
T PRK06171        213 VEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGGK  263 (266)
T ss_pred             HHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCcc
Confidence            1111     1  346678889999999999999999999999999888875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=278.82  Aligned_cols=248  Identities=25%  Similarity=0.319  Sum_probs=195.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.. .++..+++..                 .+.++.++++|+
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~-----------------~~~~~~~~~~D~   65 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRA-----------------AGGEALALTADL   65 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHh-----------------cCCeEEEEEEeC
Confidence            3578899999999999999999999999999999999853 3444444433                 245688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.++++++|+||||||......++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||
T Consensus        66 ~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS  144 (260)
T PRK12823         66 ETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSS  144 (260)
T ss_pred             CCHHHHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcC
Confidence            999999999999999999999999999975434678889999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc--chhhhhhhhcCCHHH----H
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFNIICELPET----V  262 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~pe~----~  262 (368)
                      .. ..  .+....|++||+|+++|+++++.|++++||+|++|+||+|+||+.......  ..+.....   .++.    .
T Consensus       145 ~~-~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  218 (260)
T PRK12823        145 IA-TR--GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAW---YQQIVDQTL  218 (260)
T ss_pred             cc-cc--CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhcccccccccc---HHHHHHHHh
Confidence            73 32  234568999999999999999999999999999999999999863211000  00000000   0111    1


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      ...++++...++|+++.+.||+++...++++..+..+|+
T Consensus       219 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        219 DSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             ccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            233556777889999999999988776777766666554

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-36  Score=274.49  Aligned_cols=243  Identities=23%  Similarity=0.296  Sum_probs=196.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+                 .+.++.++++|++|++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   63 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ-----------------FPGQVLTVQMDVRNPE   63 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCHH
Confidence            58999999999999999999999999999999998887777666643                 2346889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+.++++|++|||||... ..++.+.+.++|++.+++|+.++++++++++|+|.++...|+|+++||. .+
T Consensus        64 ~~~~~~~~~~~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~-~~  141 (252)
T PRK07677         64 DVQKMVEQIDEKFGRIDALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVAT-YA  141 (252)
T ss_pred             HHHHHHHHHHHHhCCccEEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcCh-hh
Confidence            999999999999999999999999765 4677889999999999999999999999999999765456899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-HHHhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLVPRI  270 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~~~~  270 (368)
                      ..+.+....|++||+|+++|+++|+.|+.+ +||+|++|+||+++|+........ ....       .+.. ...+++++
T Consensus       142 ~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~  213 (252)
T PRK07677        142 WDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE-SEEA-------AKRTIQSVPLGRL  213 (252)
T ss_pred             ccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccC-CHHH-------HHHHhccCCCCCC
Confidence            667778889999999999999999999975 699999999999996432111000 0000       0111 11234566


Q ss_pred             hhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          271 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+++++..+.||+++...+.++..+..+|+.
T Consensus       214 ~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        214 GTPEEIAGLAYFLLSDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             CCHHHHHHHHHHHcCccccccCCCEEEECCCe
Confidence            77888888888888887767777776666653

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.2e-36  Score=305.13  Aligned_cols=242  Identities=27%  Similarity=0.448  Sum_probs=203.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ...+|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++..+.+|++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~  325 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL--------------------GDEHLSVQADIT  325 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEccCC
Confidence            457899999999999999999999999999999999988776655443                    235677899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||......++.+.+.++|++++++|+.|++++++.++|+|.   ++|+||++||.
T Consensus       326 ~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~iv~isS~  402 (520)
T PRK06484        326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS---QGGVIVNLGSI  402 (520)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc---cCCEEEEECch
Confidence            999999999999999999999999999864346778899999999999999999999999999992   46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||+++++|+++|+.|+.++||+||+|+||+|+|++....... .....      .+.....++++
T Consensus       403 -~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~------~~~~~~~~~~~  474 (520)
T PRK06484        403 -ASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKAS-GRADF------DSIRRRIPLGR  474 (520)
T ss_pred             -hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccc-cHHHH------HHHHhcCCCCC
Confidence             57778889999999999999999999999999999999999999999986432110 00000      11112334566


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +..++++++.+.||+++...+++|..+..+|++
T Consensus       475 ~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg~  507 (520)
T PRK06484        475 LGDPEEVAEAIAFLASPAASYVNGATLTVDGGW  507 (520)
T ss_pred             CcCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            778889999999999988888888888888876

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3e-35  Score=278.64  Aligned_cols=216  Identities=20%  Similarity=0.306  Sum_probs=176.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ..|++++||||++|||+++|++|+++|++|++++|++++++++.+++++.+               .+.++..+.+|+++
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~---------------~~~~~~~~~~Dl~~  115 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKY---------------SKTQIKTVVVDFSG  115 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHC---------------CCcEEEEEEEECCC
Confidence            468999999999999999999999999999999999999998888886532               12467888999985


Q ss_pred             HHHHHHHHHHHHhHcC--CCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          111 PADVQKLSNFAVNEFG--SIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                        ++.+.++++.+.++  ++|++|||||+..+ ..++.+.+.+++++++++|+.|++.+++.++|.|.++ +.|+||++|
T Consensus       116 --~~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iS  192 (320)
T PLN02780        116 --DIDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIG  192 (320)
T ss_pred             --CcHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence              23333444444444  46699999998642 2467789999999999999999999999999999887 579999999


Q ss_pred             CCCCCCC-CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          188 GAGSGGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       188 S~~~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      |..+... +.|....|++||+++++|+++|+.|++++||+|++|+||+|+|++.....       ...+..+||++|+.+
T Consensus       193 S~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~-------~~~~~~~p~~~A~~~  265 (320)
T PLN02780        193 SGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR-------SSFLVPSSDGYARAA  265 (320)
T ss_pred             chhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC-------CCCCCCCHHHHHHHH
Confidence            8733222 35788999999999999999999999999999999999999999864211       111234799999999


Q ss_pred             hhhhh
Q 017635          267 VPRIR  271 (368)
Q Consensus       267 ~~~~~  271 (368)
                      +..+.
T Consensus       266 ~~~~~  270 (320)
T PLN02780        266 LRWVG  270 (320)
T ss_pred             HHHhC
Confidence            98885

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-36  Score=276.23  Aligned_cols=238  Identities=29%  Similarity=0.354  Sum_probs=198.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||++++++|+++|++|++++|+.++      +  .                 .+.++.++++|+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~--~-----------------~~~~~~~~~~D~   56 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T--V-----------------DGRPAEFHAADV   56 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h--h-----------------cCCceEEEEccC
Confidence            56789999999999999999999999999999999998754      0  1                 234678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++.+.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.+.|.|.++++.|+||++||
T Consensus        57 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  135 (252)
T PRK07856         57 RDPDQVAALVDAIVERHGRLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS  135 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            9999999999999999999999999999865 567788899999999999999999999999999987645689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.+....|++||+++++|+++++.|+.++ |+||+|+||+|+|++....... ....       .......+.+
T Consensus       136 ~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~-~~~~-------~~~~~~~~~~  205 (252)
T PRK07856        136 V-SGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGD-AEGI-------AAVAATVPLG  205 (252)
T ss_pred             c-ccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccC-HHHH-------HHHhhcCCCC
Confidence            7 567778889999999999999999999999988 9999999999999975321110 0000       0011123445


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +...|++++..+.||+++...+++|..+..+|++
T Consensus       206 ~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~  239 (252)
T PRK07856        206 RLATPADIAWACLFLASDLASYVSGANLEVHGGG  239 (252)
T ss_pred             CCcCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            6678888999999999988878888888887765

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.7e-37  Score=286.74  Aligned_cols=263  Identities=16%  Similarity=0.135  Sum_probs=187.6

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhh-hhcCCCCc-------ccccC
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGM-MAAGGSSK-------KNLVH   98 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~-~~~~~~~~-------~~~~~   98 (368)
                      .+++||++||||++  +|||+++|++|+++|++|++.+|. ++++...+.......... ....+...       ....-
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV-PIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc-chhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            46789999999996  999999999999999999998765 222222111111000000 00000000       00000


Q ss_pred             ceeEEEeccCCC--------HHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHHHHHH
Q 017635           99 AKVAGIACDVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTRE  169 (368)
Q Consensus        99 ~~v~~~~~Dv~~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  169 (368)
                      ....-+.+|+.+        .++++++++++.+++|++|+||||||... ...++.+.+.++|++.+++|+.|+++++++
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a  162 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH  162 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence            011112222222        24699999999999999999999999753 146788999999999999999999999999


Q ss_pred             HHHHHHcCCCCcEEEEEcCCCCCCCCCCCch-hhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccCcccc
Q 017635          170 AMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQ  247 (368)
Q Consensus       170 ~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~-~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~~  247 (368)
                      ++|+|++   .|+|++++|. ++..+.|... .|++||+|+++|+++|+.|+++ +|||||+|+||+++|++......  
T Consensus       163 ~~p~m~~---~G~ii~iss~-~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~--  236 (299)
T PRK06300        163 FGPIMNP---GGSTISLTYL-ASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF--  236 (299)
T ss_pred             HHHHhhc---CCeEEEEeeh-hhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc--
Confidence            9999964   4789999887 4556677764 8999999999999999999987 59999999999999998532110  


Q ss_pred             hhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          248 NKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       248 ~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      .....      .......++++...+++++..+.||+++...+.++..+..+|++..
T Consensus       237 ~~~~~------~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        237 IERMV------DYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             cHHHH------HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            00100      0111223456777889999999999999888888888888887744

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-36  Score=278.16  Aligned_cols=250  Identities=23%  Similarity=0.351  Sum_probs=203.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++                    +.++.++++|+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~   61 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI--------------------GPAAIAVSLDV   61 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEccC
Confidence            3578899999999999999999999999999999999988776655443                    13578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.+++.+++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  140 (257)
T PRK07067         62 TRQDSIDRIVAAAVERFGGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS  140 (257)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            9999999999999999999999999999875 577888899999999999999999999999999987645689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh-cCCHHHH-HHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII-CELPETV-ARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~pe~~-a~~~  266 (368)
                      . .+..+.++...|++||+++++++++++.|+.++||+|++|+||+++|+++........ ...... ....+.. ...+
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  218 (257)
T PRK07067        141 Q-AGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFA-RYENRPPGEKKRLVGEAVP  218 (257)
T ss_pred             H-HhCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhh-hccCCCHHHHHHHHhhcCC
Confidence            7 4567778889999999999999999999999999999999999999998643211000 000000 0001111 1234


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      ++++..++++++.+.||+++...+.++..+..+|+
T Consensus       219 ~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        219 LGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             CCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            56777889999999999998877777777777665

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=279.20  Aligned_cols=195  Identities=24%  Similarity=0.291  Sum_probs=168.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..               .+.++.+++||+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~---------------~~~~v~~~~~Dl   74 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAV---------------PDAKLSLRALDL   74 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---------------CCCceEEEEecC
Confidence            46789999999999999999999999999999999999999988888886532               234688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.++++++|+||||||+..  .+..+.+.++++.++++|++|++.+++.++|.|++.  .++||++||
T Consensus        75 ~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~--~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS  150 (313)
T PRK05854         75 SSLASVAALGEQLRAEGRPIHLLINNAGVMT--PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSS  150 (313)
T ss_pred             CCHHHHHHHHHHHHHhCCCccEEEECCcccc--CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEec
Confidence            9999999999999999999999999999865  234467889999999999999999999999999864  579999998


Q ss_pred             CCCCCC-----------CCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCccccc
Q 017635          189 AGSGGS-----------STPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       189 ~~~~~~-----------~~~~~~~Y~aSKaal~~l~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ..+...           +.+....|+.||+|+..|++.|++++  .+.||+||+++||+|+|++...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        151 IAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             hhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence            743211           23456789999999999999999864  4678999999999999998643

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-36  Score=279.46  Aligned_cols=233  Identities=20%  Similarity=0.248  Sum_probs=188.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++|||+ +|||+++|++|+ +|++|++++|+.+++++..++++.                 .+.++.++++|++|.+
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d~~   62 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE-----------------AGFDVSTQEVDVSSRE   62 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEeecCCHH
Confidence            589999998 699999999996 899999999998888777766643                 2357888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++ ++++++|+||||||+..        ..+++++++++|+.|++++++.++|.|++   +|++|+++|.. +
T Consensus        63 ~i~~~~~~~-~~~g~id~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~-~  129 (275)
T PRK06940         63 SVKALAATA-QTLGPVTGLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQS-G  129 (275)
T ss_pred             HHHHHHHHH-HhcCCCCEEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecc-c
Confidence            999999988 56899999999999743        23679999999999999999999999964   36778888763 3


Q ss_pred             CCCC------------------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          193 GSST------------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       193 ~~~~------------------------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ..+.                              +.+..|++||+|+++++++++.|+.++|||||+|+||+++|++...
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~  209 (275)
T PRK06940        130 HRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD  209 (275)
T ss_pred             ccCcccchhhhccccccccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence            3221                              2467899999999999999999999999999999999999998643


Q ss_pred             CcccchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          243 GSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       243 ~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..........      .+.....+++++..|+++++.+.||+++...+++|..+..||++.
T Consensus       210 ~~~~~~~~~~------~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        210 ELNGPRGDGY------RNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             hhcCCchHHH------HHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeE
Confidence            2110000000      111223456788899999999999999999999999999988763

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-35  Score=273.94  Aligned_cols=232  Identities=21%  Similarity=0.299  Sum_probs=193.0

Q ss_pred             HHhccccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           17 TMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        17 ~~~~~~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      .|+..+...++.+++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 
T Consensus        24 ~~~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~-----------------   86 (293)
T PRK05866         24 PQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR-----------------   86 (293)
T ss_pred             chhhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------
Confidence            345555555566788999999999999999999999999999999999999888877777654                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCC--CHHHHHHHHHhhchHHHHHHHHHHHHH
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF--TNEEIEQIVSTNLVGSILCTREAMRVM  174 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~--~~~~~~~~~~vN~~g~~~l~~~~lp~m  174 (368)
                      .+.++.++++|++|.++++++++++.+.+|++|++|||||... ..++.+.  +.++++..+++|+.|++.+++.++|.|
T Consensus        87 ~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~  165 (293)
T PRK05866         87 AGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGM  165 (293)
T ss_pred             cCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2346788999999999999999999999999999999999875 3444442  457899999999999999999999999


Q ss_pred             HcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhh
Q 017635          175 RDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI  254 (368)
Q Consensus       175 ~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  254 (368)
                      +++ +.++||++||.+....+.+....|++||+|+++|+++++.|+.++||+|++|+||+|+|++.......     ...
T Consensus       166 ~~~-~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-----~~~  239 (293)
T PRK05866        166 LER-GDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-----DGL  239 (293)
T ss_pred             Hhc-CCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-----cCC
Confidence            877 57899999986332234677889999999999999999999999999999999999999987532211     111


Q ss_pred             hcCCHHHHHHHhhhhhhh
Q 017635          255 ICELPETVARTLVPRIRV  272 (368)
Q Consensus       255 ~~~~pe~~a~~~~~~~~~  272 (368)
                      ...+||++|+.++..+..
T Consensus       240 ~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        240 PALTADEAAEWMVTAART  257 (293)
T ss_pred             CCCCHHHHHHHHHHHHhc
Confidence            234899999999887764

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-36  Score=274.41  Aligned_cols=242  Identities=21%  Similarity=0.281  Sum_probs=197.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++.                          ...++.++++|+
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~   58 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------------------------LPEGVEFVAADL   58 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------------------------cCCceeEEecCC
Confidence            467899999999999999999999999999999999986431                          123577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +|.++++++++++.++++++|++|||||... ...++.+.+.+++++.+++|+.+++.+++.++|+|+++ +.++||++|
T Consensus        59 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~is  137 (260)
T PRK06523         59 TTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVT  137 (260)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            9999999999999999999999999999753 13567778999999999999999999999999999876 468999999


Q ss_pred             CCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH--
Q 017635          188 GAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR--  264 (368)
Q Consensus       188 S~~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~--  264 (368)
                      |. .+..+.+ ....|+++|+++++|+++++.|+.++||+|++|+||+|+|++......    .........+++..+  
T Consensus       138 S~-~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~  212 (260)
T PRK06523        138 SI-QRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAE----RLAEAAGTDYEGAKQII  212 (260)
T ss_pred             cc-cccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHH----HHHhhcCCCHHHHHHHH
Confidence            87 4555544 788999999999999999999999999999999999999998532111    000000112232222  


Q ss_pred             ------HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 ------TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                            .++++...+++++..+.||++++..++++..+..+|++
T Consensus       213 ~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~  256 (260)
T PRK06523        213 MDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGT  256 (260)
T ss_pred             HHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCc
Confidence                  34566778899999999999998888888888888765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.2e-36  Score=261.65  Aligned_cols=219  Identities=28%  Similarity=0.391  Sum_probs=183.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+++||++++||+.+|||++++++|+++|..+.++..+.++. +...+|++.+               +...+.+++||+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~---------------p~~~v~F~~~DV   64 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAIN---------------PSVSVIFIKCDV   64 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccC---------------CCceEEEEEecc
Confidence            467899999999999999999999999999988888877774 4455666543               457899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNM  186 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~i  186 (368)
                      ++..+++++++++.+.||.||++||+||+..         +.+|++++++|+.|.++-+..++|+|.++.  ++|.|||+
T Consensus        65 t~~~~~~~~f~ki~~~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNm  135 (261)
T KOG4169|consen   65 TNRGDLEAAFDKILATFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNM  135 (261)
T ss_pred             ccHHHHHHHHHHHHHHhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEe
Confidence            9999999999999999999999999999853         467999999999999999999999998764  68999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccCcccccCcc-----cch----hhhhhhh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGST-----IQN----KQMFNII  255 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~~-----~~~----~~~~~~~  255 (368)
                      ||. .+..|.|..++|++||+++.+|+|+|+..  +.+.||+++++|||+++|++......     ...    +.+....
T Consensus       136 sSv-~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~  214 (261)
T KOG4169|consen  136 SSV-AGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP  214 (261)
T ss_pred             ccc-cccCccccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc
Confidence            998 79999999999999999999999998864  56789999999999999998754311     111    1222334


Q ss_pred             cCCHHHHHHHhhhhhhhc
Q 017635          256 CELPETVARTLVPRIRVV  273 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~~~  273 (368)
                      ..+|+.+++.++..+..+
T Consensus       215 ~q~~~~~a~~~v~aiE~~  232 (261)
T KOG4169|consen  215 KQSPACCAINIVNAIEYP  232 (261)
T ss_pred             cCCHHHHHHHHHHHHhhc
Confidence            456777888777666543

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-36  Score=274.13  Aligned_cols=249  Identities=24%  Similarity=0.326  Sum_probs=206.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+.+++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++++                 .+.++.++.
T Consensus         4 ~~~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~   66 (256)
T PRK06124          4 LQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA-----------------AGGAAEALA   66 (256)
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEE
Confidence            345678999999999999999999999999999999999998888777777654                 235688999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      ||++|++++.++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||+
T Consensus        67 ~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~  144 (256)
T PRK06124         67 FDIADEEAVAAAFARIDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQ-GYGRIIA  144 (256)
T ss_pred             ccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            9999999999999999999999999999999876 5778889999999999999999999999999999876 5789999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. .+..+.++...|+++|++++++++.++.|+.++||+|++|+||+++|++......  .+...      +......
T Consensus       145 ~ss~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~--~~~~~------~~~~~~~  215 (256)
T PRK06124        145 ITSI-AGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAA--DPAVG------PWLAQRT  215 (256)
T ss_pred             Eeec-hhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhcc--ChHHH------HHHHhcC
Confidence            9987 5667788899999999999999999999999999999999999999997532211  01110      0011112


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +.++...+++++..+.||+++...+.+|..+..+|++
T Consensus       216 ~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg~  252 (256)
T PRK06124        216 PLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGGY  252 (256)
T ss_pred             CCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCCc
Confidence            3345566777888888888887767777777776654

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=275.79  Aligned_cols=222  Identities=23%  Similarity=0.330  Sum_probs=188.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++..                  +.++..++||
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~------------------~~~~~~~~~D   65 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG------------------DDRVLTVVAD   65 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC------------------CCcEEEEEec
Confidence            3467899999999999999999999999999999999999888776665521                  2456778899


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+.+|++|++|||||+.. ..++.+.+.++|++++++|+.|++++++.++|+|.++  .|+||++|
T Consensus        66 v~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~is  142 (296)
T PRK05872         66 VTDLAAMQAAAEEAVERFGGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVS  142 (296)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEe
Confidence            99999999999999999999999999999976 6788899999999999999999999999999999864  58999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc--chhhhhh------hhcCCH
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFN------IICELP  259 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~------~~~~~p  259 (368)
                      |. ++..+.++...|++||+++++|+++++.|+.++||+|++++||+++|++.......  ....+..      ....+|
T Consensus       143 S~-~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  221 (296)
T PRK05872        143 SL-AAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSV  221 (296)
T ss_pred             CH-hhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCH
Confidence            87 57778888999999999999999999999999999999999999999987543211  0001110      112468


Q ss_pred             HHHHHHhhhhhh
Q 017635          260 ETVARTLVPRIR  271 (368)
Q Consensus       260 e~~a~~~~~~~~  271 (368)
                      +++|+.++..+.
T Consensus       222 ~~va~~i~~~~~  233 (296)
T PRK05872        222 EKCAAAFVDGIE  233 (296)
T ss_pred             HHHHHHHHHHHh
Confidence            999988887664

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-35  Score=276.93  Aligned_cols=225  Identities=28%  Similarity=0.370  Sum_probs=192.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++++|+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~-----------------~g~~~~~v~~Dv   66 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA-----------------AGGEALAVVADV   66 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------cCCcEEEEEecC
Confidence            356789999999999999999999999999999999999988888777764                 345788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+.+++|++|++|||||... ..++.+.+.+++++.+++|+.|++++++.++|+|+++ +.|+||++||
T Consensus        67 ~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS  144 (334)
T PRK07109         67 ADAEAVQAAADRAEEELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGS  144 (334)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCC
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999887 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCcccccCcccchhh-hhhhhcCCHHHHHHH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQ-MFNIICELPETVART  265 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~pe~~a~~  265 (368)
                      . .+..+.+....|++||+++++|+++++.|+..  .+|+|++|+||.++||+........... .......+||++|+.
T Consensus       145 ~-~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~  223 (334)
T PRK07109        145 A-LAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADA  223 (334)
T ss_pred             h-hhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHH
Confidence            7 56777888999999999999999999999875  4799999999999999864321111100 001122479999999


Q ss_pred             hhhhhhhc
Q 017635          266 LVPRIRVV  273 (368)
Q Consensus       266 ~~~~~~~~  273 (368)
                      ++..+..+
T Consensus       224 i~~~~~~~  231 (334)
T PRK07109        224 ILYAAEHP  231 (334)
T ss_pred             HHHHHhCC
Confidence            99877654

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.2e-35  Score=280.36  Aligned_cols=264  Identities=16%  Similarity=0.171  Sum_probs=191.9

Q ss_pred             EEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           37 VITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        37 lITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |||||++|||+++|++|+++| ++|++++|+.++++++.+++..                 .+.++.++++|++|.++++
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~d~~~v~   63 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-----------------PKDSYTVMHLDLASLDSVR   63 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-----------------CCCeEEEEEecCCCHHHHH
Confidence            699999999999999999999 9999999998887776666532                 2346788999999999999


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEEcCCCCCCC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAGSGGS  194 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS~~~~~~  194 (368)
                      ++++++.+.++++|+||||||+..+..+..+.+.++|++++++|+.|++.+++.++|.|++++. +|+||++||..+...
T Consensus        64 ~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~  143 (308)
T PLN00015         64 QFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTN  143 (308)
T ss_pred             HHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccc
Confidence            9999999888999999999998643345667899999999999999999999999999987632 589999998743110


Q ss_pred             ----------------------------------CCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcc-cCc
Q 017635          195 ----------------------------------STPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMV-LTD  238 (368)
Q Consensus       195 ----------------------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v-~T~  238 (368)
                                                        ..++..+|++||+|+..+++.+++++.+ .||+|++|+||+| .|+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  223 (308)
T PLN00015        144 TLAGNVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTG  223 (308)
T ss_pred             cccccCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcc
Confidence                                              0124568999999999999999999975 6999999999999 788


Q ss_pred             ccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce----ecCCCccccchh
Q 017635          239 LLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW----FDDQGRALYAAE  314 (368)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~  314 (368)
                      |....... .+....       ...+.+.++...|++.+..+.++.++.....+|..+..+|.-    .+....+.+...
T Consensus       224 ~~~~~~~~-~~~~~~-------~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~  295 (308)
T PLN00015        224 LFREHIPL-FRLLFP-------PFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLSQEASDAEK  295 (308)
T ss_pred             ccccccHH-HHHHHH-------HHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcccccccCcChhhcCHHH
Confidence            86542211 010000       011122233344555555555555443333344444333321    123334445667


Q ss_pred             hhhhhhhhccc
Q 017635          315 ADRIRNWAENR  325 (368)
Q Consensus       315 ~~~l~~w~~~~  325 (368)
                      .++||+|.++.
T Consensus       296 ~~~lw~~~~~~  306 (308)
T PLN00015        296 AKKVWEISEKL  306 (308)
T ss_pred             HHHHHHHHHHh
Confidence            78899998764

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.4e-36  Score=274.40  Aligned_cols=247  Identities=26%  Similarity=0.319  Sum_probs=202.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+ ..+..+++..                 .+.++.++++|++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~-----------------~~~~~~~~~~Dl~   64 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCG-----------------RGHRCTAVVADVR   64 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHH-----------------hCCceEEEECCCC
Confidence            467899999999999999999999999999999999874 3344444432                 2356788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|+|.++ +.++||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  142 (263)
T PRK08226         65 DPASVAAAIKRAKEKEGRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIAR-KDGRIVMMSSV  142 (263)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEECcH
Confidence            999999999999999999999999999875 5778888999999999999999999999999999876 46899999886


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH-----H
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-----R  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-----~  264 (368)
                      .+...+.+.+..|+++|+++++++++++.|+.++||+|++|+||+++|++..........       ..+++..     .
T Consensus       143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~  215 (263)
T PRK08226        143 TGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNP-------EDPESVLTEMAKA  215 (263)
T ss_pred             HhcccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccC-------CCcHHHHHHHhcc
Confidence            333456677889999999999999999999999999999999999999986432110000       0111111     2


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .++.++..+++++..+.||+++...++++..+..||+..
T Consensus       216 ~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        216 IPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             CCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCcc
Confidence            244566788899999999999888888888888888764

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-35  Score=272.75  Aligned_cols=241  Identities=20%  Similarity=0.283  Sum_probs=198.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|+++||||++|||+++|++|+++|++|+++.| +.+.+++..++++.                 .+.++.++.+|++|+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~   64 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRS-----------------HGVRAEIRQLDLSDL   64 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------cCCceEEEEccCCCH
Confidence            589999999999999999999999999998865 55666666666654                 345788999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++++|.+++++|+||++||. .
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~-~  142 (256)
T PRK12743         65 PEGAQALDKLIQRLGRIDVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSV-H  142 (256)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeec-c
Confidence            9999999999999999999999999876 4667788999999999999999999999999999876556899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      +..+.++...|+++|+++++++++++.++.++||+|++|+||+++|++......    ....      ......++.+..
T Consensus       143 ~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~----~~~~------~~~~~~~~~~~~  212 (256)
T PRK12743        143 EHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDS----DVKP------DSRPGIPLGRPG  212 (256)
T ss_pred             ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccCh----HHHH------HHHhcCCCCCCC
Confidence            677788889999999999999999999999999999999999999998542111    0000      000122345556


Q ss_pred             hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          272 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       272 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..+.|++++...+.++..+..+|++
T Consensus       213 ~~~dva~~~~~l~~~~~~~~~G~~~~~dgg~  243 (256)
T PRK12743        213 DTHEIASLVAWLCSEGASYTTGQSLIVDGGF  243 (256)
T ss_pred             CHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            7778888888888877777777777777765

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=271.64  Aligned_cols=243  Identities=23%  Similarity=0.345  Sum_probs=199.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||.++|++|+++|++|++++|+.+.. +...++                   .+.++.++++|
T Consensus        10 ~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~-------------------~~~~~~~~~~D   69 (255)
T PRK06841         10 AFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQL-------------------LGGNAKGLVCD   69 (255)
T ss_pred             hcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh-------------------hCCceEEEEec
Confidence            3578899999999999999999999999999999999987642 222222                   12356689999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++|
T Consensus        70 l~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~s  147 (255)
T PRK06841         70 VSDSQSVEAAVAAVISAFGRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLA  147 (255)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEc
Confidence            99999999999999999999999999999876 5777788999999999999999999999999999876 478999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.+....|+++|+++++++++++.|++++||+||+|+||+|+|++..........         .+.....+.
T Consensus       148 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~---------~~~~~~~~~  217 (255)
T PRK06841        148 SQ-AGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKG---------ERAKKLIPA  217 (255)
T ss_pred             ch-hhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHH---------HHHHhcCCC
Confidence            87 45677888899999999999999999999999999999999999999986432110000         011122334


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++..++++++.+.+|+++....++|..+..+|++
T Consensus       218 ~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg~  252 (255)
T PRK06841        218 GRFAYPEEIAAAALFLASDAAAMITGENLVIDGGY  252 (255)
T ss_pred             CCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            56677788888888888888777788877777765

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=268.24  Aligned_cols=217  Identities=27%  Similarity=0.356  Sum_probs=188.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.                     ++.++.+|+
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---------------------~~~~~~~D~   59 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG---------------------LVVGGPLDV   59 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---------------------cceEEEccC
Confidence            45678999999999999999999999999999999999888766554431                     367789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++.+.+.++++|++|||||... ..++.+.+.+++++++++|+.|++.+++.++|.|+++ +.|+||++||
T Consensus        60 ~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS  137 (273)
T PRK07825         60 TDPASFAAFLDAVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVAS  137 (273)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence            9999999999999999999999999999976 5788889999999999999999999999999999987 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|++||+++++|+++++.|+.++||+|++|+||+++|++.......     ......+|+++|+.++.
T Consensus       138 ~-~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~~-----~~~~~~~~~~va~~~~~  211 (273)
T PRK07825        138 L-AGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGGA-----KGFKNVEPEDVAAAIVG  211 (273)
T ss_pred             c-cccCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhcccccc-----cCCCCCCHHHHHHHHHH
Confidence            7 56778889999999999999999999999999999999999999999986543111     11123479999999988


Q ss_pred             hhhhcc
Q 017635          269 RIRVVK  274 (368)
Q Consensus       269 ~~~~~~  274 (368)
                      .+..++
T Consensus       212 ~l~~~~  217 (273)
T PRK07825        212 TVAKPR  217 (273)
T ss_pred             HHhCCC
Confidence            776543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-35  Score=273.87  Aligned_cols=267  Identities=24%  Similarity=0.292  Sum_probs=206.3

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      .....++.+++++||||++|||+++|++|+.+|++|++.+|+.++.+++.++++...               ....+.++
T Consensus        27 ~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~---------------~~~~i~~~   91 (314)
T KOG1208|consen   27 VTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGK---------------ANQKIRVI   91 (314)
T ss_pred             eeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCceEEE
Confidence            344668899999999999999999999999999999999999999999999998632               34689999


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +||++|.++|+++++++.+.++++|++|||||++.+  + ...+.|.++.+|.+|++|+|++++.++|.|+++. .+|||
T Consensus        92 ~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~--~-~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV  167 (314)
T KOG1208|consen   92 QLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAP--P-FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIV  167 (314)
T ss_pred             ECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccC--C-cccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEE
Confidence            999999999999999999999999999999999762  2 2678899999999999999999999999999874 49999


Q ss_pred             EEcCCCCCCCC------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc---chh
Q 017635          185 NMDGAGSGGSS------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI---QNK  249 (368)
Q Consensus       185 ~isS~~~~~~~------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~---~~~  249 (368)
                      ++||.......            +....+|+.||.++..+++.|++.+.+ ||.+++++||.|.|+........   ..+
T Consensus       168 ~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~~~~~~~l~~  246 (314)
T KOG1208|consen  168 NVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRVNLLLRLLAK  246 (314)
T ss_pred             EEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecchHHHHHHHH
Confidence            99997431100            222346999999999999999999988 99999999999999933331111   111


Q ss_pred             hhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCCCccccchhhhhhhhhhccc
Q 017635          250 QMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIRNWAENR  325 (368)
Q Consensus       250 ~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~w~~~~  325 (368)
                      .+...+..++++.|+..++....|+-......|..              ++..........+++.++++|+..++.
T Consensus       247 ~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~--------------d~~~~~~~~~a~d~~~~~~lw~~s~~l  308 (314)
T KOG1208|consen  247 KLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFE--------------DCAIAEPSEEALDEELAEKLWKFSEEL  308 (314)
T ss_pred             HHHHHhccCHHHHhhheehhccCccccCccccccc--------------cccccccccccCCHHHHHHHHHHHHHH
Confidence            22233334688888887777666643333333322              222222233455666777888866554

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1e-34  Score=274.88  Aligned_cols=190  Identities=22%  Similarity=0.279  Sum_probs=164.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.                     .+.++++|
T Consensus        21 ~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~---------------------~v~~~~~D   79 (315)
T PRK06196         21 GHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID---------------------GVEVVMLD   79 (315)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh---------------------hCeEEEcc
Confidence            346789999999999999999999999999999999999888776655542                     26678999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.++++++|+||||||....   ..+.+.++++..+++|+.|++.+++.++|.|+++ +.++||++|
T Consensus        80 l~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vS  155 (315)
T PRK06196         80 LADLESVRAFAERFLDSGRRIDILINNAGVMAC---PETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALS  155 (315)
T ss_pred             CCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC---CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEEC
Confidence            999999999999999999999999999998541   2355678899999999999999999999999876 468999999


Q ss_pred             CCCCCC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          188 GAGSGG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       188 S~~~~~-----------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      |.+...           .+.+....|++||++++.+++.++.++.++||+|++|+||++.|++...
T Consensus       156 S~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~  221 (315)
T PRK06196        156 SAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRH  221 (315)
T ss_pred             CHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCcccc
Confidence            863221           1334567899999999999999999999999999999999999998654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.6e-34  Score=273.41  Aligned_cols=267  Identities=16%  Similarity=0.136  Sum_probs=194.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+|+++||||++|||+++|++|+++| ++|++++|+.++.+++.+++..                 .+.++.++.+|++|
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~   64 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-----------------PKDSYTIMHLDLGS   64 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-----------------CCCeEEEEEcCCCC
Confidence            36899999999999999999999999 9999999999888776666532                 23467889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEEEEcCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGA  189 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv~isS~  189 (368)
                      .++++++++++.++++++|++|||||+..+..+..+.+.+++++++++|+.|++.+++.++|.|++++ +.++||++||.
T Consensus        65 ~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~  144 (314)
T TIGR01289        65 LDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSI  144 (314)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecC
Confidence            99999999999888999999999999854223345678999999999999999999999999998763 25899999987


Q ss_pred             CCCCC--------------------------------CCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcc-
Q 017635          190 GSGGS--------------------------------STPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMV-  235 (368)
Q Consensus       190 ~~~~~--------------------------------~~~~~~~Y~aSKaal~~l~~~la~e~~-~~gI~v~~v~PG~v-  235 (368)
                      .+...                                +..+..+|++||+|+..+++.|++++. ++||+|++|+||+| 
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~  224 (314)
T TIGR01289       145 TGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIA  224 (314)
T ss_pred             ccccccCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCccc
Confidence            43110                                112456799999999999999999985 46999999999999 


Q ss_pred             cCcccccCcccchhhhh----hh---hcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCCCc
Q 017635          236 LTDLLLSGSTIQNKQMF----NI---ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGR  308 (368)
Q Consensus       236 ~T~~~~~~~~~~~~~~~----~~---~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~  308 (368)
                      +|++....... ....+    ..   ...+|++.|+.++..+..++. .....|+......         .+.-.+....
T Consensus       225 ~T~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-~~~g~~~~~~~~~---------~~~~~~~~~~  293 (314)
T TIGR01289       225 DTGLFREHVPL-FRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKL-KKSGVYWSWGNRQ---------ESFVNQLSEE  293 (314)
T ss_pred             CCcccccccHH-HHHHHHHHHHHHhccccchhhhhhhhHHhhcCccc-CCCceeeecCCcc---------cccccCCChh
Confidence            69987542211 00010    00   124677777777655543321 1223333321100         0000122333


Q ss_pred             cccchhhhhhhhhhcccc
Q 017635          309 ALYAAEADRIRNWAENRA  326 (368)
Q Consensus       309 ~~~~~~~~~l~~w~~~~~  326 (368)
                      ..++...++||+|.++..
T Consensus       294 ~~~~~~~~~lw~~~~~~~  311 (314)
T TIGR01289       294 VSDDSKASKMWDLSEKLV  311 (314)
T ss_pred             hcCHHHHHHHHHHHHHHh
Confidence            445667889999988754

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.5e-35  Score=268.85  Aligned_cols=245  Identities=21%  Similarity=0.275  Sum_probs=196.5

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      .++..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++                    +.++.++
T Consensus         2 ~~~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~   61 (255)
T PRK05717          2 SEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL--------------------GENAWFI   61 (255)
T ss_pred             CCCCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc--------------------CCceEEE
Confidence            35667889999999999999999999999999999999999887665543332                    2357889


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      ++|+++.++++++++++.+++|++|++|||||...+ ..++.+.+.+++++.+++|+.+++.++++++|+|.++  .++|
T Consensus        62 ~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~i  139 (255)
T PRK05717         62 AMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAI  139 (255)
T ss_pred             EccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEE
Confidence            999999999999999999999999999999998642 2567788999999999999999999999999999764  4799


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. .+..+.+....|++||+++++++++++.++.+ +|+|++|+||+++|++......   ...      ......
T Consensus       140 i~~sS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~~---~~~------~~~~~~  208 (255)
T PRK05717        140 VNLAST-RARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRRA---EPL------SEADHA  208 (255)
T ss_pred             EEEcch-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCccccccc---hHH------HHHHhh
Confidence            999887 56677788899999999999999999999987 4999999999999987432110   000      011112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+..++..+++++..+.|++++...+.++..+..+|++
T Consensus       209 ~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg~  247 (255)
T PRK05717        209 QHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGGM  247 (255)
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCc
Confidence            334456667777888888888776656666666655554

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=272.79  Aligned_cols=219  Identities=20%  Similarity=0.298  Sum_probs=178.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-------HHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  101 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v  101 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.++       +++..++++.                 .+.++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-----------------~~~~~   64 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEA-----------------AGGQA   64 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHh-----------------cCCce
Confidence            45788999999999999999999999999999999998653       2333333332                 24578


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          102 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       102 ~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      .++++|+++.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|+++ ++|
T Consensus        65 ~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-~~g  142 (273)
T PRK08278         65 LPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKS-ENP  142 (273)
T ss_pred             EEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhc-CCC
Confidence            89999999999999999999999999999999999866 5778889999999999999999999999999999877 568


Q ss_pred             EEEEEcCCCCCCCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCcccccCcccchhhhhhhhcCC
Q 017635          182 HIFNMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       182 ~Iv~isS~~~~~~~~--~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      +|+++||. .+..+.  ++...|++||+++++|+++++.|+.++||+||+|+|| +++|++....... ...+.  ...+
T Consensus       143 ~iv~iss~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-~~~~~--~~~~  218 (273)
T PRK08278        143 HILTLSPP-LNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-DEAMR--RSRT  218 (273)
T ss_pred             EEEEECCc-hhccccccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-ccccc--ccCC
Confidence            99999886 444554  7788999999999999999999999999999999999 6899865432111 00000  1135


Q ss_pred             HHHHHHHhhhhh
Q 017635          259 PETVARTLVPRI  270 (368)
Q Consensus       259 pe~~a~~~~~~~  270 (368)
                      |+++|+.++..+
T Consensus       219 p~~va~~~~~l~  230 (273)
T PRK08278        219 PEIMADAAYEIL  230 (273)
T ss_pred             HHHHHHHHHHHh
Confidence            666666665444

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=269.18  Aligned_cols=249  Identities=21%  Similarity=0.269  Sum_probs=201.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD-----------------LGRRALAVPTDIT   64 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCceEEEecCCC
Confidence            45789999999999999999999999999999999999888777766654                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.++++++|++|||||...+..++.+.+.+++++.+++|+.+++.++++++|.|.++  +++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~  142 (258)
T PRK07890         65 DEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSM  142 (258)
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEech
Confidence            99999999999999999999999999986534677788999999999999999999999999999765  4799999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-----HH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----AR  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~  264 (368)
                       ....+.++...|+++|++++.++++++.|++++||++++++||++.|++...........    .....+..     ..
T Consensus       143 -~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  217 (258)
T PRK07890        143 -VLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGK----YGVTVEQIYAETAAN  217 (258)
T ss_pred             -hhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccc----cCCCHHHHHHHHhhc
Confidence             566778888999999999999999999999999999999999999999753211100000    00011111     12


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+.++..+++++.++.|++++....+++..+..+|++
T Consensus       218 ~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg~  255 (258)
T PRK07890        218 SDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCGE  255 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence            23445566788888888888876666777766666654

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.9e-35  Score=247.36  Aligned_cols=187  Identities=26%  Similarity=0.362  Sum_probs=169.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++.|.++|||||++|||+++|++|.+.|-+||+++|++++++++.++.                     ..++...||+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---------------------p~~~t~v~Dv   59 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---------------------PEIHTEVCDV   59 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---------------------cchheeeecc
Confidence            5678999999999999999999999999999999999999988776653                     4678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCC-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      .|.++.++++++++++|+.+++||||||+....... .+...++.++.+.+|+.+|+.+++.++|++.++ ..+.||++|
T Consensus        60 ~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q-~~a~IInVS  138 (245)
T COG3967          60 ADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQ-PEATIINVS  138 (245)
T ss_pred             cchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhC-CCceEEEec
Confidence            999999999999999999999999999997632222 244567788999999999999999999999998 489999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      |. .+..|....+.||++|+|++.|+.+|+.+++..+|+|.-+.|..|+|+
T Consensus       139 SG-LafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         139 SG-LAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             cc-cccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            75 688899999999999999999999999999999999999999999997

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.8e-34  Score=271.98  Aligned_cols=241  Identities=24%  Similarity=0.302  Sum_probs=192.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+++++|+++||||++|||+++|++|+++|++|++.+++ .++.++..+++++                 .+.++.++.+
T Consensus         7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~-----------------~g~~~~~~~~   69 (306)
T PRK07792          7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA-----------------AGAKAVAVAG   69 (306)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh-----------------cCCeEEEEeC
Confidence            467899999999999999999999999999999999885 4456666666654                 3467889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC------CC
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP------KG  180 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~~  180 (368)
                      |++|.++++++++.+.+ +|++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|+|+++.      ..
T Consensus        70 Dv~d~~~~~~~~~~~~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~  147 (306)
T PRK07792         70 DISQRATADELVATAVG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVY  147 (306)
T ss_pred             CCCCHHHHHHHHHHHHH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCC
Confidence            99999999999999988 999999999999876 46778899999999999999999999999999997531      13


Q ss_pred             cEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH
Q 017635          181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  260 (368)
Q Consensus       181 g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  260 (368)
                      |+||++||. ++..+.++...|+++|+++++|+++++.|+.++||+||+|+|| +.|+|........           ++
T Consensus       148 g~iv~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~-----------~~  214 (306)
T PRK07792        148 GRIVNTSSE-AGLVGPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDA-----------PD  214 (306)
T ss_pred             cEEEEECCc-ccccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhcccc-----------ch
Confidence            799999987 5666778889999999999999999999999999999999999 4888753211100           00


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .... ... ...+++++..+.||+++.....+|..+..+|+.
T Consensus       215 ~~~~-~~~-~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        215 VEAG-GID-PLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             hhhh-ccC-CCCHHHHHHHHHHHcCccccCCCCCEEEEcCCe
Confidence            0000 000 114555666667777776666777777777654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.4e-34  Score=290.75  Aligned_cols=228  Identities=24%  Similarity=0.352  Sum_probs=195.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ...++++++|||||++|||+++|++|+++|++|++++|+.++++++.++++.                 .+.++.++.||
T Consensus       310 ~~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D  372 (582)
T PRK05855        310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA-----------------AGAVAHAYRVD  372 (582)
T ss_pred             cccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcC
Confidence            3456789999999999999999999999999999999999888888777754                 34578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|+++++++++|.|++++.+|+||++|
T Consensus       373 v~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~s  451 (582)
T PRK05855        373 VSDADAMEAFAEWVRAEHGVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVA  451 (582)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            99999999999999999999999999999976 57788999999999999999999999999999999875568999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc----chh--------hhhhhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI----QNK--------QMFNII  255 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~--------~~~~~~  255 (368)
                      |. ++..+.++...|++||+|+++|+++|+.|+.++||+|++|+||+|+|++.......    ...        ......
T Consensus       452 S~-~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  530 (582)
T PRK05855        452 SA-AAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRR  530 (582)
T ss_pred             Ch-hhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcccc
Confidence            98 57778888999999999999999999999999999999999999999987542210    000        001112


Q ss_pred             cCCHHHHHHHhhhhhhhcc
Q 017635          256 CELPETVARTLVPRIRVVK  274 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~~~~  274 (368)
                      ..+||++|+.++..+...+
T Consensus       531 ~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        531 GYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             CCCHHHHHHHHHHHHHcCC
Confidence            2479999999998886543

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-35  Score=266.71  Aligned_cols=244  Identities=21%  Similarity=0.303  Sum_probs=204.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++++++..++..                 .+.++.++.+|++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~   68 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEA-----------------EGGAAHVVSLDVT   68 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCC
Confidence            46789999999999999999999999999999999999888777776643                 2346788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-------CcE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-------GGH  182 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-------~g~  182 (368)
                      +.++++++++++.+.++++|++|||||... ..++.+.+.++++.++++|+.+++.+++.++|.|.++..       .++
T Consensus        69 ~~~~~~~~~~~~~~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  147 (258)
T PRK06949         69 DYQSIKAAVAHAETEAGTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGR  147 (258)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeE
Confidence            999999999999999999999999999865 467778889999999999999999999999999986632       479


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||+++|. .+..+.+....|+++|++++.++++++.++.++||+|++|+||+|+|++........  .        ....
T Consensus       148 iv~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~--------~~~~  216 (258)
T PRK06949        148 IINIASV-AGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETE--Q--------GQKL  216 (258)
T ss_pred             EEEECcc-cccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChH--H--------HHHH
Confidence            9999887 466677788899999999999999999999999999999999999999864321110  0        0111


Q ss_pred             H-HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 A-RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      . ..+..++..|++++..+.||+++...+++|..+..||++
T Consensus       217 ~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        217 VSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDGF  257 (258)
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCCC
Confidence            1 123456778899999999999998888888888777764

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=267.85  Aligned_cols=246  Identities=22%  Similarity=0.323  Sum_probs=197.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|++++|+++||||++|||.+++++|+++|++|++++|+.+.+++..+++..                 .+.++.++.+|
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   66 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ-----------------AGPEGLGVSAD   66 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCceEEEECC
Confidence            3678899999999999999999999999999999999998877766666644                 23456789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.|++.++++++|.|+++  +|+|+++|
T Consensus        67 v~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~is  143 (264)
T PRK07576         67 VRDYAAVEAAFAQIADEFGPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQIS  143 (264)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEEC
Confidence            99999999999999999999999999999765 4677888999999999999999999999999999764  48999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-CcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      |. ++..+.+....|+++|+++++|+++++.|+.++||+|++|+||+++ |+.......  .+....      ......+
T Consensus       144 s~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~--~~~~~~------~~~~~~~  214 (264)
T PRK07576        144 AP-QAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAP--SPELQA------AVAQSVP  214 (264)
T ss_pred             Ch-hhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhccc--CHHHHH------HHHhcCC
Confidence            87 4566778889999999999999999999999999999999999997 553322110  000000      0000112


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +.+...+++++..+.|++++...+.++..+..+|++
T Consensus       215 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg~  250 (264)
T PRK07576        215 LKRNGTKQDIANAALFLASDMASYITGVVLPVDGGW  250 (264)
T ss_pred             CCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCCc
Confidence            344556777888888888876666677777777765

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=271.15  Aligned_cols=227  Identities=20%  Similarity=0.209  Sum_probs=180.6

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+..++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.+..               .+.++.++.
T Consensus         9 ~~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~   73 (306)
T PRK06197          9 ADIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAAT---------------PGADVTLQE   73 (306)
T ss_pred             cccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC---------------CCCceEEEE
Confidence            34467899999999999999999999999999999999999988887777765421               134688899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.++++++++++.++++++|+||||||...+   ..+.+.++++..+++|+.|++.+++.++|.|+++ +.++||+
T Consensus        74 ~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~  149 (306)
T PRK06197         74 LDLTSLASVRAAADALRAAYPRIDLLINNAGVMYT---PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-PGSRVVT  149 (306)
T ss_pred             CCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccC---CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-CCCEEEE
Confidence            99999999999999999999999999999998642   2346778899999999999999999999999876 4689999


Q ss_pred             EcCCCCCC------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEE--ecCcccCcccccCcccchh--
Q 017635          186 MDGAGSGG------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA--SPGMVLTDLLLSGSTIQNK--  249 (368)
Q Consensus       186 isS~~~~~------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v--~PG~v~T~~~~~~~~~~~~--  249 (368)
                      +||.++..            .+.+....|++||+++++|++.+++++++.|++|+++  +||+|+|++.+........  
T Consensus       150 vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~  229 (306)
T PRK06197        150 VSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVA  229 (306)
T ss_pred             ECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHH
Confidence            99863221            1234567899999999999999999999888777665  6999999987643221111  


Q ss_pred             -hhhhhhcCCHHHHHHHhhhhhh
Q 017635          250 -QMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       250 -~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                       .....+..+|++.+...+....
T Consensus       230 ~~~~~~~~~~~~~g~~~~~~~~~  252 (306)
T PRK06197        230 TVLAPLLAQSPEMGALPTLRAAT  252 (306)
T ss_pred             HHHHhhhcCCHHHHHHHHHHHhc
Confidence             1112234567777776665544

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.4e-35  Score=268.59  Aligned_cols=229  Identities=20%  Similarity=0.237  Sum_probs=181.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLL----SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~----~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++||||++|||+++|++|++    +|++|++++|+.++++++.++++...               .+.++.++++|++|
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~v~~~~~Dl~~   66 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAER---------------SGLRVVRVSLDLGA   66 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcC---------------CCceEEEEEeccCC
Confidence            689999999999999999997    79999999999998888887775421               23468889999999


Q ss_pred             HHHHHHHHHHHHhHcCCC----CEEEEccCCCCCCC-CCCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEE
Q 017635          111 PADVQKLSNFAVNEFGSI----DIWINNAGTNKGFK-PLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHI  183 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~i----D~li~nAG~~~~~~-~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~I  183 (368)
                      .++++++++.+.+.+|++    |+||||||...... ...+ .+.+++++.+++|+.+++.+++.++|.|++++ ..++|
T Consensus        67 ~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~i  146 (256)
T TIGR01500        67 EAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTV  146 (256)
T ss_pred             HHHHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEE
Confidence            999999999998887653    69999999754222 2333 35789999999999999999999999998652 35799


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-chhhhhhhhcCCHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICELPETV  262 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~pe~~  262 (368)
                      |++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... .....      .....
T Consensus       147 v~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~------~~~~~  219 (256)
T TIGR01500       147 VNISSL-CAIQPFKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDM------RKGLQ  219 (256)
T ss_pred             EEECCH-HhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhH------HHHHH
Confidence            999987 56778888999999999999999999999999999999999999999986421100 00000      01112


Q ss_pred             HHHhhhhhhhcccccceeeeccC
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTP  285 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~  285 (368)
                      ...+++++..|++++..+.++++
T Consensus       220 ~~~~~~~~~~p~eva~~~~~l~~  242 (256)
T TIGR01500       220 ELKAKGKLVDPKVSAQKLLSLLE  242 (256)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHh
Confidence            33455666677777777777764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-34  Score=265.31  Aligned_cols=243  Identities=24%  Similarity=0.298  Sum_probs=195.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|+++||||++|||+++|++|+++|++|+++.+ +.++.+....++                    +.++.++++|
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~D   60 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL--------------------GDRAIALQAD   60 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh--------------------CCceEEEEcC
Confidence            5678899999999999999999999999999998765 444443332221                    2467889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCC-CCEEEEccCCCC-----CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          108 VCEPADVQKLSNFAVNEFGS-IDIWINNAGTNK-----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~-iD~li~nAG~~~-----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      ++|+++++++++++.+.+|+ +|++|||||...     ...++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+
T Consensus        61 ~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g  139 (253)
T PRK08642         61 VTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQ-GFG  139 (253)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhc-CCe
Confidence            99999999999999998888 999999998742     12457788999999999999999999999999999876 468


Q ss_pred             EEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          182 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       182 ~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      +|++++|. ....+.++...|++||+++++|++++++++.++||+||+|+||+++|+.......   +....      +.
T Consensus       140 ~iv~iss~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~~~------~~  209 (253)
T PRK08642        140 RIINIGTN-LFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP---DEVFD------LI  209 (253)
T ss_pred             EEEEECCc-cccCCCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC---HHHHH------HH
Confidence            99999886 4555666678999999999999999999999999999999999999986432110   11100      01


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ....++.++..+++++..+.||+++...+++|..+..+|++
T Consensus       210 ~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg~  250 (253)
T PRK08642        210 AATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGGL  250 (253)
T ss_pred             HhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            11234566778889999999999988888888888888875

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.7e-35  Score=265.56  Aligned_cols=231  Identities=16%  Similarity=0.174  Sum_probs=186.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||++|||+++|++|+++|++|++++|+.++..   +++++                 .  .+.++.+|++|.+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~-----------------~--~~~~~~~D~~~~~   59 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQ-----------------A--GAQCIQADFSTNA   59 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHH-----------------c--CCEEEEcCCCCHH
Confidence            579999999999999999999999999999999876432   23322                 1  2567899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEEEEcCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGS  191 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv~isS~~~  191 (368)
                      +++++++++.+.++++|++|||||... .....+.+.++|++.+++|+.+++.+++.++|.|++++ +.++||++||. .
T Consensus        60 ~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~-~  137 (236)
T PRK06483         60 GIMAFIDELKQHTDGLRAIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDY-V  137 (236)
T ss_pred             HHHHHHHHHHhhCCCccEEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcch-h
Confidence            999999999999999999999999865 34456778999999999999999999999999998762 25799999887 4


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      +..+.+....|++||+++++|+++++.|+++ +||||+|+||++.|+...   .   ...      ..+..++.++++..
T Consensus       138 ~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~---~---~~~------~~~~~~~~~~~~~~  204 (236)
T PRK06483        138 VEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEGD---D---AAY------RQKALAKSLLKIEP  204 (236)
T ss_pred             hccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEEEccCceecCCCC---C---HHH------HHHHhccCccccCC
Confidence            6667788899999999999999999999988 599999999999876321   0   010      01122344566777


Q ss_pred             hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          272 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       272 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++++++.+.||++  ..++++..+..+|++
T Consensus       205 ~~~~va~~~~~l~~--~~~~~G~~i~vdgg~  233 (236)
T PRK06483        205 GEEEIIDLVDYLLT--SCYVTGRSLPVDGGR  233 (236)
T ss_pred             CHHHHHHHHHHHhc--CCCcCCcEEEeCccc
Confidence            88888888889886  345677776666654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.4e-35  Score=265.36  Aligned_cols=241  Identities=21%  Similarity=0.282  Sum_probs=195.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|+++||||++|||+++|++|+++|++|++. +|+..+.++..++++.                 .+.++..+.+|++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   63 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKA-----------------LGFDFIASEGNVG   63 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            468999999999999999999999999998885 4555555555555543                 2456788899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus        64 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  141 (246)
T PRK12938         64 DWDSTKAAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINISSV  141 (246)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEech
Confidence            999999999999999999999999999865 4677888999999999999999999999999999876 56899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       .+..+.++...|+++|+++++|++++++++.+.||++++|+||+++|++......    ...      .......+..+
T Consensus       142 -~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~----~~~------~~~~~~~~~~~  210 (246)
T PRK12938        142 -NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRP----DVL------EKIVATIPVRR  210 (246)
T ss_pred             -hccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcCh----HHH------HHHHhcCCccC
Confidence             5666778889999999999999999999999999999999999999998643211    110      01111223445


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +..+++++..+.||+++...+.++..+..+|+
T Consensus       211 ~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        211 LGSPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             CcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            66777888888888887766666666666654

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-34  Score=266.57  Aligned_cols=246  Identities=23%  Similarity=0.335  Sum_probs=196.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+++++..++++.                 .+.++.++.+|+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   68 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA-----------------AGRRAHVVAADL   68 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence            457899999999999999999999999999999999998888777766643                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++++.|+|.+..+.++||++||
T Consensus        69 ~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS  147 (263)
T PRK07814         69 AHPEATAGLAGQAVEAFGRLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISS  147 (263)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcc
Confidence            9999999999999999999999999999865 467788899999999999999999999999999987546789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.++...|++||+++++++++++.|+.+ +|+|++|+||++.|++......  ...+.      .+........
T Consensus       148 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~--~~~~~------~~~~~~~~~~  217 (263)
T PRK07814        148 T-MGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAA--NDELR------APMEKATPLR  217 (263)
T ss_pred             c-cccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccC--CHHHH------HHHHhcCCCC
Confidence            7 56677888999999999999999999999987 6999999999999997542110  01110      0001112233


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++..+++++..+.|++++.....++..+..+++.
T Consensus       218 ~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        218 RLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             CCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            4455666777777777665545555555555443

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.3e-34  Score=265.18  Aligned_cols=249  Identities=24%  Similarity=0.354  Sum_probs=202.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++..                 .+.++.++.+|++|+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~~   63 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQ-----------------AGGKAVAYKLDVSDKDQ   63 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCCCHHH
Confidence            6899999999999999999999999999999998887777777654                 34578899999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.+++.|++++.+++||++||. .+.
T Consensus        64 i~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~-~~~  141 (254)
T TIGR02415        64 VFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASI-AGH  141 (254)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecch-hhc
Confidence            99999999999999999999999866 5778889999999999999999999999999999887556899999887 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH-HHHHhhhhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VARTLVPRIRV  272 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~~~~~~~~  272 (368)
                      .+.+....|+++|+++++|++.++.|+.+.||+|+.++||+++|++.........+..........+. ....+.++...
T Consensus       142 ~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (254)
T TIGR02415       142 EGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSE  221 (254)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCC
Confidence            77888999999999999999999999999999999999999999986432211111000000000111 12234456778


Q ss_pred             cccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          273 VKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      ++++++.+.||+++...+.++..+..+|+
T Consensus       222 ~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  250 (254)
T TIGR02415       222 PEDVAGLVSFLASEDSDYITGQSILVDGG  250 (254)
T ss_pred             HHHHHHHHHhhcccccCCccCcEEEecCC
Confidence            88889999999988776666766666664

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=264.72  Aligned_cols=242  Identities=20%  Similarity=0.227  Sum_probs=194.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++. +..+++.+                 .+.++.++.+|+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~-----------------~~~~~~~~~~D~   64 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA-----------------LQPRAEFVQVDL   64 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh-----------------cCCceEEEEccC
Confidence            578899999999999999999999999999999999998776 55555543                 235688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++.++++++++++.+.++++|++|||||... ...+.+.+ ++++..+++|+.+++.+++.++|.|++.  .++|+++||
T Consensus        65 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss  140 (258)
T PRK08628         65 TDDAQCRDAVEQTVAKFGRIDGLVNNAGVND-GVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISS  140 (258)
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCcccC-CCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECC
Confidence            9999999999999999999999999999754 34444444 9999999999999999999999998754  489999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-----H
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----A  263 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a  263 (368)
                      . .+..+.+....|++||+++++++++++.|+.++||+|++|+||.++|++.........         .++..     .
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~---------~~~~~~~~~~~  210 (258)
T PRK08628        141 K-TALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFD---------DPEAKLAAITA  210 (258)
T ss_pred             H-HhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhcc---------CHHHHHHHHHh
Confidence            7 4666777889999999999999999999999999999999999999997532110000         11111     1


Q ss_pred             HHhh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +.+. +++..+++++..+.|++++.....++..+..+|++
T Consensus       211 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  250 (258)
T PRK08628        211 KIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGY  250 (258)
T ss_pred             cCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCCc
Confidence            1122 24566778888888888887766667666666654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.4e-34  Score=292.03  Aligned_cols=192  Identities=33%  Similarity=0.486  Sum_probs=171.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   61 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL--------------------GPDHHALAMDVS   61 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEeccC
Confidence            457899999999999999999999999999999999988877655543                    235678999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |+++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++++++|+.+++.++++++|+|++++.+++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS  141 (520)
T PRK06484         62 DEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS  141 (520)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            9999999999999999999999999998431 356778999999999999999999999999999987644559999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      . ++..+.+....|+++|+++++|+++++.|+.++||+|++|+||+|+|++...
T Consensus       142 ~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~  194 (520)
T PRK06484        142 G-AGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE  194 (520)
T ss_pred             c-ccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh
Confidence            7 5777888899999999999999999999999999999999999999998643

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-34  Score=261.51  Aligned_cols=248  Identities=23%  Similarity=0.271  Sum_probs=198.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....               ...++.++.+|++|.+
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~   66 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEY---------------GEGMAYGFGADATSEQ   66 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---------------CCceeEEEEccCCCHH
Confidence            6899999999999999999999999999999999888877776665421               1146889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.++++++++++|.|++++..++||++||. ++
T Consensus        67 ~i~~~~~~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~-~~  144 (259)
T PRK12384         67 SVLALSRGVDEIFGRVDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK-SG  144 (259)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc-cc
Confidence            999999999999999999999999876 5778889999999999999999999999999999876336899999886 45


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCcccccCcccchhhhhhhhcCCHHHHHH-----Hh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVAR-----TL  266 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~~a~-----~~  266 (368)
                      ..+.+....|++||+|+++++++++.|++++||+|++|+||.+ .|++......    .........+++..+     .+
T Consensus       145 ~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  220 (259)
T PRK12384        145 KVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLP----QYAKKLGIKPDEVEQYYIDKVP  220 (259)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhH----HHHHhcCCChHHHHHHHHHhCc
Confidence            5667778899999999999999999999999999999999975 6766532111    111001112233322     34


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +++...++|++..+.||+++...+.++..+..+|+
T Consensus       221 ~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        221 LKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             ccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            45666788899999999887665666666655554

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-34  Score=264.50  Aligned_cols=241  Identities=18%  Similarity=0.268  Sum_probs=189.3

Q ss_pred             cCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 017635           29 CKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSS-----------ESVRMTVTELEENLKEGMMAAGGSSKKN   95 (368)
Q Consensus        29 ~~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~-----------~~~~~~~~~l~~~~~~~~~~~~~~~~~~   95 (368)
                      |++++|+++||||++  |||.++|++|+++|++|++++|++           .......+++..                
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~----------------   64 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES----------------   64 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHh----------------
Confidence            467889999999994  999999999999999999999972           222222233322                


Q ss_pred             ccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 017635           96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  175 (368)
Q Consensus        96 ~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  175 (368)
                       .+.+++++++|+++.++++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|.
T Consensus        65 -~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  142 (256)
T PRK12748         65 -YGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD  142 (256)
T ss_pred             -cCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence             2457889999999999999999999999999999999999865 57788889999999999999999999999999997


Q ss_pred             cCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          176 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       176 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                      ++ ..++||++||. .+..+.++...|++||+++++++++++.|+.+.||+|++++||+++|++......   ....   
T Consensus       143 ~~-~~~~iv~~ss~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~---~~~~---  214 (256)
T PRK12748        143 GK-AGGRIINLTSG-QSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELK---HHLV---  214 (256)
T ss_pred             hc-CCeEEEEECCc-cccCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHH---Hhhh---
Confidence            65 46899999886 5666777889999999999999999999999999999999999999987532110   0000   


Q ss_pred             cCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          256 CELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                             ...+..++..+++++..+.|+.++...+.++..+..||++
T Consensus       215 -------~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  254 (256)
T PRK12748        215 -------PKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGGF  254 (256)
T ss_pred             -------ccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCCc
Confidence                   0111223345566666666777776655566666555543

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=259.00  Aligned_cols=214  Identities=22%  Similarity=0.287  Sum_probs=181.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++..                 .+ ++.++++|++|.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~-~~~~~~~Dl~~~~   63 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK-----------------AA-RVSVYAADVRDAD   63 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc-----------------CC-eeEEEEcCCCCHH
Confidence            47999999999999999999999999999999998877665554421                 12 6889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+++|++|++|||||.........+.+.++++..+++|+.|++.+++.++|.|+++ +.++||++||. ++
T Consensus        64 ~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~-~~  141 (257)
T PRK07024         64 ALAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASV-AG  141 (257)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEech-hh
Confidence            99999999999999999999999986522223337889999999999999999999999999877 57899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.+....|++||++++.|+++++.|+.++||+|++|+||+++|++.......      .....+|+++++.++..+..
T Consensus       142 ~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~------~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        142 VRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNPYP------MPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCCCC------CCCccCHHHHHHHHHHHHhC
Confidence            777888899999999999999999999999999999999999999976432110      01123799999999887754

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=265.11  Aligned_cols=246  Identities=22%  Similarity=0.292  Sum_probs=185.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      ++++++|+++||||++|||+++|++|+++|++|++++++.    +..++..++++.                 .+.++.+
T Consensus         3 ~~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~   65 (257)
T PRK12744          3 DHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKA-----------------AGAKAVA   65 (257)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHH-----------------hCCcEEE
Confidence            3467889999999999999999999999999977776543    334444444432                 2346888


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +++|++|+++++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|.|++   .+++
T Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~i  141 (257)
T PRK12744         66 FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKI  141 (257)
T ss_pred             EecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCE
Confidence            999999999999999999999999999999999866 467788899999999999999999999999999964   3567


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      ++++|+. ...+.+.+..|++||+|+++|+++++.|+.++||+|++++||++.|++........   ..... ...  ..
T Consensus       142 v~~~ss~-~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~-~~~--~~  214 (257)
T PRK12744        142 VTLVTSL-LGAFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAE---AVAYH-KTA--AA  214 (257)
T ss_pred             EEEecch-hcccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccc---hhhcc-ccc--cc
Confidence            7664331 22345778899999999999999999999999999999999999999764321110   00000 000  00


Q ss_pred             HHhh--hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLV--PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..++  .++..++|++..+.||+++ ..+.++..+..+|++
T Consensus       215 ~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg~  254 (257)
T PRK12744        215 LSPFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGGY  254 (257)
T ss_pred             ccccccCCCCCHHHHHHHHHHhhcc-cceeecceEeecCCc
Confidence            1111  1455677888888888875 345556666665543

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.5e-34  Score=261.07  Aligned_cols=235  Identities=20%  Similarity=0.300  Sum_probs=194.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ++||||++|||+++|++|+++|++|++++|+ .++.++..+++++                 .+.++.++++|++|.+++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~~~   63 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA-----------------QGGNARLLQFDVADRVAC   63 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCeEEEEEccCCCHHHH
Confidence            5899999999999999999999999998875 4556666666544                 235788999999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHH-HHHHcCCCCcEEEEEcCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-p~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.+++++++.++ |.++++ +.++||++||. ++.
T Consensus        64 ~~~~~~~~~~~~~i~~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~vsS~-~~~  140 (239)
T TIGR01831        64 RTLLEADIAEHGAYYGVVLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRAR-QGGRIITLASV-SGV  140 (239)
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhc-CCeEEEEEcch-hhc
Confidence            9999999999999999999999876 4667788999999999999999999999875 544444 56899999987 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  273 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~  273 (368)
                      .+.+....|+++|+++++++++++.|+.++||+|++|+||+++|++......    .       ..+..+..+++++..+
T Consensus       141 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~-------~~~~~~~~~~~~~~~~  209 (239)
T TIGR01831       141 MGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH----D-------LDEALKTVPMNRMGQP  209 (239)
T ss_pred             cCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH----H-------HHHHHhcCCCCCCCCH
Confidence            7788889999999999999999999999999999999999999998643211    0       0122234456778888


Q ss_pred             ccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          274 KGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       274 ~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +++++.+.||+++...+.++..+..+|+
T Consensus       210 ~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       210 AEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             HHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            9999999999998887777777666654

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=262.38  Aligned_cols=184  Identities=24%  Similarity=0.330  Sum_probs=165.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||+++|++|+++|++|++++|+.++++++    .+                   ..+.++.+|++|.+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~-------------------~~~~~~~~Dl~d~~   60 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EA-------------------EGLEAFQLDYAEPE   60 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH-------------------CCceEEEccCCCHH
Confidence            58999999999999999999999999999999998765432    22                   13667899999999


Q ss_pred             HHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          113 DVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       113 ~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++++++++.+.+ |++|++|||||... ..++.+.+.++++..+++|+.|++.+++.++|.|+++ +.++||++||. .
T Consensus        61 ~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-~~g~iv~isS~-~  137 (277)
T PRK05993         61 SIAALVAQVLELSGGRLDALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-GQGRIVQCSSI-L  137 (277)
T ss_pred             HHHHHHHHHHHHcCCCccEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-CCCEEEEECCh-h
Confidence            9999999987766 68999999999876 5778889999999999999999999999999999887 57899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +..+.+....|++||+++++|+++|+.|+.++||+|++|+||+++|++...
T Consensus       138 ~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~  188 (277)
T PRK05993        138 GLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRAN  188 (277)
T ss_pred             hcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence            677788889999999999999999999999999999999999999998653

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-34  Score=260.58  Aligned_cols=192  Identities=24%  Similarity=0.390  Sum_probs=171.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|+++||||++|||++++++|+++|++|++ .+|+.++.++..++++.                 .+.++.++.+|++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEA-----------------LGRKALAVKANVG   64 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCCC
Confidence            46799999999999999999999999999876 58888877777777654                 3457889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.|+||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~  142 (250)
T PRK08063         65 DVEKIKEMFAQIDEEFGRLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKV-GGGKIISLSSL  142 (250)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEcch
Confidence            999999999999999999999999999876 5788889999999999999999999999999999877 57899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       ....+.+....|++||+++++|+++++.++.+.||++++|+||+++|++...
T Consensus       143 -~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~  194 (250)
T PRK08063        143 -GSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKH  194 (250)
T ss_pred             -hhccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence             4556677888999999999999999999999999999999999999998643

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=4.3e-33  Score=264.49  Aligned_cols=196  Identities=17%  Similarity=0.166  Sum_probs=163.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..++|+++||||++|||++++++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~   65 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-----------------PPDSYTIIHIDLG   65 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------------cCCceEEEEecCC
Confidence            45789999999999999999999999999999999999888877766632                 2346888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS  188 (368)
                      |.++++++++++.+.++++|+||||||+..+..+..+.+.++++..+++|+.|++++++.++|.|++++. .++||++||
T Consensus        66 ~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS  145 (322)
T PRK07453         66 DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGT  145 (322)
T ss_pred             CHHHHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcc
Confidence            9999999999988877899999999998642233456789999999999999999999999999987643 369999998


Q ss_pred             CCCCC----------------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecC
Q 017635          189 AGSGG----------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPG  233 (368)
Q Consensus       189 ~~~~~----------------------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~-~~gI~v~~v~PG  233 (368)
                      ..+..                                  .+......|+.||.+...+++.+++++. .+||+|++++||
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG  225 (322)
T PRK07453        146 VTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPG  225 (322)
T ss_pred             cccCccccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCC
Confidence            63211                                  0112346899999999999999999985 469999999999


Q ss_pred             cc-cCccccc
Q 017635          234 MV-LTDLLLS  242 (368)
Q Consensus       234 ~v-~T~~~~~  242 (368)
                      +| .|++.+.
T Consensus       226 ~v~~t~~~~~  235 (322)
T PRK07453        226 CVADTPLFRN  235 (322)
T ss_pred             cccCCccccc
Confidence            99 5888654

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=256.72  Aligned_cols=217  Identities=24%  Similarity=0.262  Sum_probs=179.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.++ ++++.++++..                ...+++++++|++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~----------------~~~~v~~~~~D~~   70 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA----------------GASSVEVIDFDAL   70 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc----------------CCCceEEEEecCC
Confidence            57899999999999999999999995 999999999886 77777777552                1236889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+ ++++|++|||+|...+ ......+.++..+.+++|+.+++.+++.++|.|+++ +.++|+++||.
T Consensus        71 ~~~~~~~~~~~~~~-~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-~~~~iv~isS~  147 (253)
T PRK07904         71 DTDSHPKVIDAAFA-GGDVDVAIVAFGLLGD-AEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-GFGQIIAMSSV  147 (253)
T ss_pred             ChHHHHHHHHHHHh-cCCCCEEEEeeecCCc-hhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            99999999998876 5899999999998642 111222455667889999999999999999999987 57999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       .+..+.+....|++||+++.+|+++|+.|+.++||+|++|+||+++|++.......       ....+|+++|+.++..
T Consensus       148 -~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~~-------~~~~~~~~~A~~i~~~  219 (253)
T PRK07904        148 -AGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKEA-------PLTVDKEDVAKLAVTA  219 (253)
T ss_pred             -hhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCCC-------CCCCCHHHHHHHHHHH
Confidence             45556677789999999999999999999999999999999999999987542211       1234799999999988


Q ss_pred             hhhccc
Q 017635          270 IRVVKG  275 (368)
Q Consensus       270 ~~~~~~  275 (368)
                      +...+.
T Consensus       220 ~~~~~~  225 (253)
T PRK07904        220 VAKGKE  225 (253)
T ss_pred             HHcCCC
Confidence            865443

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.9e-33  Score=254.10  Aligned_cols=214  Identities=23%  Similarity=0.340  Sum_probs=182.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      -+..+|.|+|||+-+|+|+.+|++|.++|++|+..+.+++..+++..+.+                   ..+...+++|+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~-------------------s~rl~t~~LDV   85 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK-------------------SPRLRTLQLDV   85 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc-------------------CCcceeEeecc
Confidence            45688999999999999999999999999999999988877766655542                   36788889999


Q ss_pred             CCHHHHHHHHHHHHhHc--CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          109 CEPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      +++++|+++.+.+.+..  ..+-.||||||+....++.+-.+.+++++++++|++|++.+++.++|+++++  .|||||+
T Consensus        86 T~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnv  163 (322)
T KOG1610|consen   86 TKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNV  163 (322)
T ss_pred             CCHHHHHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEe
Confidence            99999999999888765  3488999999987667888999999999999999999999999999999986  6999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. .+..+.|..+.|++||+|++.|+.+|++|+.+.||+|..|.||..+|++...  ....+.+.......|++..+..
T Consensus       164 sS~-~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~~--~~~~~~~~~~w~~l~~e~k~~Y  240 (322)
T KOG1610|consen  164 SSV-LGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLANP--EKLEKRMKEIWERLPQETKDEY  240 (322)
T ss_pred             ccc-ccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCCh--HHHHHHHHHHHhcCCHHHHHHH
Confidence            998 6889999999999999999999999999999999999999999999999862  1222333333444454444443

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=6.2e-34  Score=260.43  Aligned_cols=244  Identities=21%  Similarity=0.271  Sum_probs=196.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||++++++|+++|++|++++|+.         +..                 .+.++.++++|+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-----------------~~~~~~~~~~D~   57 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-----------------EDYPFATFVLDV   57 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-----------------cCCceEEEEecC
Confidence            568899999999999999999999999999999999986         111                 234678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++|+++||
T Consensus        58 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss  135 (252)
T PRK08220         58 SDAAAVAQVCQRLLAETGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGS  135 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECC
Confidence            9999999999999999999999999999876 5778888999999999999999999999999999876 5689999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-HHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~  267 (368)
                      . .+..+.+....|++||+++++++++++.|+.++||+|++++||++.|++........... ........+.. ...+.
T Consensus       136 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  213 (252)
T PRK08220        136 N-AAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGE-QQVIAGFPEQFKLGIPL  213 (252)
T ss_pred             c-hhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhh-hhhhhhHHHHHhhcCCC
Confidence            7 466677788999999999999999999999999999999999999999854321110000 00000001111 11234


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++..++++++.+.||+++...+.++..+..+|+.
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        214 GKIARPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             cccCCHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            56677888888888999887777777776666653

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-34  Score=257.91  Aligned_cols=241  Identities=26%  Similarity=0.407  Sum_probs=190.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|+++||||++|||+++|++|+++|++|+++.|+.+ ..++..+++..                 .+.++.++.+|
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEA-----------------AGGRAIAVQAD   63 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHh-----------------cCCeEEEEECC
Confidence            4678899999999999999999999999999988877643 44555555543                 34578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+.++++|++|||||... ..++.+.+.+++++++++|+.+++.++++++|.|.+   .++|+++|
T Consensus        64 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~s  139 (245)
T PRK12937         64 VADAAAVTRLFDAAETAFGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLS  139 (245)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEe
Confidence            99999999999999999999999999999865 567788899999999999999999999999999853   47999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. +...+.+....|+++|++++.++++++.++.+.||++++++||+++|++.......  ...       .......++
T Consensus       140 s~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~--~~~-------~~~~~~~~~  209 (245)
T PRK12937        140 TS-VIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSA--EQI-------DQLAGLAPL  209 (245)
T ss_pred             ec-cccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCH--HHH-------HHHHhcCCC
Confidence            87 56677888899999999999999999999999999999999999999985332110  000       000111233


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCC
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  300 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  300 (368)
                      .+...+++++..+.|++++...+.++..+..+|
T Consensus       210 ~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        210 ERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             CCCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence            444556677777777777665555555544444

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=264.73  Aligned_cols=244  Identities=22%  Similarity=0.269  Sum_probs=193.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+++++|++|||||++|||.++|++|+++|++|++++|+.++ .+...+.++.                 .+.++.++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~  103 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-----------------EGVKCLLIPG  103 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-----------------cCCeEEEEEc
Confidence            357789999999999999999999999999999999998643 4444343332                 2457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.+.++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|.|++   .++||++
T Consensus       104 Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~i  180 (290)
T PRK06701        104 DVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINT  180 (290)
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEE
Confidence            9999999999999999999999999999998643456788999999999999999999999999999953   4789999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.+....|++||+|+++++++++.++.++||+|++|+||+++|++......  .+..       .+......
T Consensus       181 sS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~--~~~~-------~~~~~~~~  250 (290)
T PRK06701        181 GSI-TGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD--EEKV-------SQFGSNTP  250 (290)
T ss_pred             ecc-cccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC--HHHH-------HHHHhcCC
Confidence            987 5666778888999999999999999999999999999999999999997543211  0000       01111223


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +.+...++++++.+.||+++....+++..+..+|+
T Consensus       251 ~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        251 MQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             cCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            44555677777778888877665556665555554

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-34  Score=259.01  Aligned_cols=243  Identities=23%  Similarity=0.316  Sum_probs=194.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL--------------------GESALVIRADAG   62 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh--------------------CCceEEEEecCC
Confidence            467899999999999999999999999999999999977665544332                    246778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.+++.++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|+|.+   .+++|+++|.
T Consensus        63 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~  138 (249)
T PRK06500         63 DVAAQKALAQALAEAFGRLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSI  138 (249)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEech
Confidence            999999999999999999999999999865 567778899999999999999999999999999853   4678888776


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH-HHHHhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VARTLVP  268 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~~~~  268 (368)
                       ++..+.+....|+++|+++++++++++.|+.++||+|++++||+++|++....... ......    ..+. ....++.
T Consensus       139 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-~~~~~~----~~~~~~~~~~~~  212 (249)
T PRK06500        139 -NAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLP-EATLDA----VAAQIQALVPLG  212 (249)
T ss_pred             -HhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccC-ccchHH----HHHHHHhcCCCC
Confidence             46667788899999999999999999999999999999999999999976431100 000000    0011 1112334


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +...+++++..+.|++++...+.++..+..+|+.
T Consensus       213 ~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg~  246 (249)
T PRK06500        213 RFGTPEEIAKAVLYLASDESAFIVGSEIIVDGGM  246 (249)
T ss_pred             CCcCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            5566778888888888877667777777776653

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=7.5e-34  Score=257.51  Aligned_cols=231  Identities=19%  Similarity=0.325  Sum_probs=185.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+ .++.+++.+++                      .+.++.+|+
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~----------------------~~~~~~~D~   60 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET----------------------GATAVQTDS   60 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh----------------------CCeEEecCC
Confidence            4678999999999999999999999999999988764 44443322211                      245678999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+++.++++    +++++|++|||||... ..+..+.+.+++++.+++|+.+++.+++.++|.|.+   .++||++||
T Consensus        61 ~~~~~~~~~~~----~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS  132 (237)
T PRK12742         61 ADRDAVIDVVR----KSGALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGS  132 (237)
T ss_pred             CCHHHHHHHHH----HhCCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEec
Confidence            99998887764    3578999999999865 466778899999999999999999999999999963   479999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-HHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~  267 (368)
                      ..+...+.++...|+++|+++++++++++.++.++||+||+|+||+++|++......     .       .+.. ...++
T Consensus       133 ~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-----~-------~~~~~~~~~~  200 (237)
T PRK12742        133 VNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-----M-------KDMMHSFMAI  200 (237)
T ss_pred             cccccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-----H-------HHHHHhcCCC
Confidence            743345678889999999999999999999999999999999999999998532110     0       0111 11234


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++...|++++..+.||+++...+.+|..+..||++
T Consensus       201 ~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg~  235 (237)
T PRK12742        201 KRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAF  235 (237)
T ss_pred             CCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCCc
Confidence            56678888999999999998888888888888775

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=254.89  Aligned_cols=219  Identities=25%  Similarity=0.353  Sum_probs=188.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..++++.                 .+.++.+++||++|+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~~~~~   63 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE-----------------AGGDGFYQRCDVRDYSQ   63 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEccCCCHHH
Confidence            4799999999999999999999999999999999988888877764                 34568889999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++.+.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||. .+.
T Consensus        64 ~~~~~~~i~~~~~~id~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~-~~~  140 (270)
T PRK05650         64 LTALAQACEEKWGGIDVIVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQ-KSGRIVNIASM-AGL  140 (270)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEECCh-hhc
Confidence            99999999999999999999999876 5778889999999999999999999999999999876 46899999987 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch---hhh---hhhhcCCHHHHHHHhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN---KQM---FNIICELPETVARTLV  267 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~---~~~---~~~~~~~pe~~a~~~~  267 (368)
                      .+.+..+.|+++|+++++|+++|+.|+.+.||++++|+||+++|++.........   ...   ......+|+++|+.++
T Consensus       141 ~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~  220 (270)
T PRK05650        141 MQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIY  220 (270)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHH
Confidence            7888899999999999999999999999999999999999999998754321111   111   1112347999999998


Q ss_pred             hhhhh
Q 017635          268 PRIRV  272 (368)
Q Consensus       268 ~~~~~  272 (368)
                      ..+..
T Consensus       221 ~~l~~  225 (270)
T PRK05650        221 QQVAK  225 (270)
T ss_pred             HHHhC
Confidence            77754

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=252.72  Aligned_cols=236  Identities=25%  Similarity=0.360  Sum_probs=193.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++ .                 .+.++.++.+|+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-----------------~~~~~~~~~~D~   62 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-P-----------------YPGRHRWVVADL   62 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-h-----------------cCCceEEEEccC
Confidence            4568899999999999999999999999999999999988877766655 2                 234688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+.+ ++++|++|||||... ..++.+.+.+++++.+++|+.|++.+++.++|+|.++ +.++|+++||
T Consensus        63 ~d~~~~~~~~~~~~~-~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS  139 (263)
T PRK09072         63 TSEAGREAVLARARE-MGGINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGS  139 (263)
T ss_pred             CCHHHHHHHHHHHHh-cCCCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecC
Confidence            999999999998876 789999999999875 5778889999999999999999999999999999876 4689999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.++...|+++|+++.+++++++.|+.+.||+|++++||+++|++............ .....+|+++|+.++.
T Consensus       140 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~-~~~~~~~~~va~~i~~  217 (263)
T PRK09072        140 T-FGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQALNRAL-GNAMDDPEDVAAAVLQ  217 (263)
T ss_pred             h-hhCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcccccccc-cCCCCCHHHHHHHHHH
Confidence            7 4666778889999999999999999999999999999999999999998643221111111 1123479999999987


Q ss_pred             hhhhcccccceeeeccCHHHHHH
Q 017635          269 RIRVVKGSGKAINYLTPPRILLA  291 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~  291 (368)
                      .+....    ...++..+...+.
T Consensus       218 ~~~~~~----~~~~~~~~~~~~~  236 (263)
T PRK09072        218 AIEKER----AERWLGWPEKLFV  236 (263)
T ss_pred             HHhCCC----CEEecCchHHHHH
Confidence            776432    2345555444443

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=254.90  Aligned_cols=220  Identities=24%  Similarity=0.380  Sum_probs=184.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||+++|++|+++|++|++++|+.+++++..+++...                .+..+.++.+|++|+++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~~   64 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL----------------GGTVPEHRALDISDYDA   64 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------CCCcceEEEeeCCCHHH
Confidence            57999999999999999999999999999999988887777776542                11235567999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.+++.+++.++|.|.+++.+++||++||. .+.
T Consensus        65 ~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~-~~~  142 (272)
T PRK07832         65 VAAFAADIHAAHGSMDVVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSA-AGL  142 (272)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccc-ccc
Confidence            99999999999999999999999875 5778889999999999999999999999999999876456899999987 466


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc----chh---hhhh-h--hcCCHHHHH
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI----QNK---QMFN-I--ICELPETVA  263 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~----~~~---~~~~-~--~~~~pe~~a  263 (368)
                      .+.+....|++||+++++|+++++.|+.++||+|++|+||+++|++.......    ..+   .... .  ...+|+++|
T Consensus       143 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA  222 (272)
T PRK07832        143 VALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAA  222 (272)
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence            67888899999999999999999999999999999999999999986542100    000   0111 1  124799999


Q ss_pred             HHhhhhhh
Q 017635          264 RTLVPRIR  271 (368)
Q Consensus       264 ~~~~~~~~  271 (368)
                      +.++..+.
T Consensus       223 ~~~~~~~~  230 (272)
T PRK07832        223 EKILAGVE  230 (272)
T ss_pred             HHHHHHHh
Confidence            99887774

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=254.57  Aligned_cols=214  Identities=17%  Similarity=0.248  Sum_probs=173.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||++|||++++++|+++|++|++++|+.+++++..+++                      .+.++++|++|++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~~~~~v   59 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----------------------DVDAIVCDNTDPASL   59 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------------cCcEEecCCCCHHHH
Confidence            4899999999999999999999999999999988776554432                      245688999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCC-----CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +++++++.+   ++|++|||||....     ..++.+ +.++|++++++|+.++++++|+++|.|++   +|+||++||.
T Consensus        60 ~~~~~~~~~---~id~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~  132 (223)
T PRK05884         60 EEARGLFPH---HLDTIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPE  132 (223)
T ss_pred             HHHHHHHhh---cCcEEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecC
Confidence            999887643   69999999985320     112333 57899999999999999999999999963   4899999886


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                      .     .+....|++||+|+++|+++++.|++++||+||+|+||+++|++.....        .    .|       .  
T Consensus       133 ~-----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~~--------~----~p-------~--  186 (223)
T PRK05884        133 N-----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGLS--------R----TP-------P--  186 (223)
T ss_pred             C-----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhcc--------C----CC-------C--
Confidence            3     3456899999999999999999999999999999999999998642110        0    11       0  


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                       ..+++++..+.||+++...++++..+..||++..
T Consensus       187 -~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg~~~  220 (223)
T PRK05884        187 -PVAAEIARLALFLTTPAARHITGQTLHVSHGALA  220 (223)
T ss_pred             -CCHHHHHHHHHHHcCchhhccCCcEEEeCCCeec
Confidence             1456667777889999888999999888888754

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=255.76  Aligned_cols=193  Identities=23%  Similarity=0.372  Sum_probs=172.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||.+++++|+++|++|++++|+.++.++..+++.                  .+.++.++++|+
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D~   62 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA------------------AGGRAFARQGDV   62 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh------------------cCCeEEEEEcCC
Confidence            56789999999999999999999999999999999999887766655543                  135688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|+||||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++|+++||
T Consensus        63 ~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  140 (252)
T PRK06138         63 GSAEAVEALVDFVAARWGRLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTAS  140 (252)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECC
Confidence            9999999999999999999999999999876 4677788999999999999999999999999999876 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      . ++..+.+....|+++|++++.++++++.|+.++||+|++++||++.|++...
T Consensus       141 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~  193 (252)
T PRK06138        141 Q-LALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR  193 (252)
T ss_pred             h-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhh
Confidence            7 4556777889999999999999999999999999999999999999998643

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=259.13  Aligned_cols=237  Identities=25%  Similarity=0.308  Sum_probs=190.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||.+++++|+++|++|++++|+..+.++..+++                      ...++++|++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~~   61 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----------------------GGLFVPTDVT   61 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----------------------CCcEEEeeCC
Confidence            367899999999999999999999999999999999987665544332                      1246899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |+++++++++++.+.++++|++|||||...+ ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS  140 (255)
T PRK06057         62 DEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTAS  140 (255)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcc
Confidence            9999999999999999999999999997542 2456678899999999999999999999999999876 4689999988


Q ss_pred             CCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH----
Q 017635          189 AGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA----  263 (368)
Q Consensus       189 ~~~~~~~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a----  263 (368)
                      .. +..+. ++...|+++|++++++++.++.++.++||+|++|+||+++|++.......           .++..+    
T Consensus       141 ~~-~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~-----------~~~~~~~~~~  208 (255)
T PRK06057        141 FV-AVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAK-----------DPERAARRLV  208 (255)
T ss_pred             hh-hccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccC-----------CHHHHHHHHh
Confidence            63 33333 46778999999999999999999999999999999999999986432111           122222    


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +.+..++..+++++..+.||+++...+.++..+..+|+
T Consensus       209 ~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        209 HVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            22334566677788888888887776666666665554

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-32  Score=256.03  Aligned_cols=194  Identities=27%  Similarity=0.399  Sum_probs=172.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++..                 .+.++.++.+|++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   65 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA-----------------QGAEVLGVRTDVS   65 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            35689999999999999999999999999999999998888777776654                 2357888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC-----cEEE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIF  184 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~-----g~Iv  184 (368)
                      |.++++++++.+.+.+|++|+||||||... ..++.+.+.+++++.+++|+.|+++++++++|.|.++...     ++||
T Consensus        66 d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv  144 (287)
T PRK06194         66 DAAQVEALADAALERFGAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIV  144 (287)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEE
Confidence            999999999999999999999999999976 5777888999999999999999999999999999876432     7999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccccc
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ++||. ++..+.+..+.|++||+++++|+++++.|+.  ..+||+++++||+|+|++...
T Consensus       145 ~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        145 NTASM-AGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             EeCCh-hhccCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccc
Confidence            99987 5667778889999999999999999999987  457999999999999998754

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-33  Score=256.61  Aligned_cols=194  Identities=31%  Similarity=0.494  Sum_probs=173.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++..                  +.++.++.+|+
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~   62 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA------------------GGRAIAVAADV   62 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------------------CCeEEEEECCC
Confidence            457889999999999999999999999999999999999887766665532                  24688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.++++++|++|||||......++.+.+.+++++.+++|+.+++.+++.+++.|.++ +.++||++||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  141 (251)
T PRK07231         63 SDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGE-GGGAIVNVAS  141 (251)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            999999999999999999999999999986545667788999999999999999999999999999876 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      . .+..+.++...|+.+|++++.+++.++.+++++||++++++||+++|++...
T Consensus       142 ~-~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~  194 (251)
T PRK07231        142 T-AGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEA  194 (251)
T ss_pred             h-hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchh
Confidence            7 5667788889999999999999999999999989999999999999998653

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.4e-33  Score=257.16  Aligned_cols=183  Identities=27%  Similarity=0.378  Sum_probs=165.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+++||||++|||++++++|+++|++|++++|+.+++++.    .+                   ..+.++.+|++|.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~----~~-------------------~~~~~~~~Dv~~~   58 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL----AS-------------------LGVHPLSLDVTDE   58 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh-------------------CCCeEEEeeCCCH
Confidence            578999999999999999999999999999999998765432    11                   2367889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.+.++++|+||||||... .+++.+.+.++++..+++|+.+++.+++.++|.|+++ +.|+||++||. .
T Consensus        59 ~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS~-~  135 (273)
T PRK06182         59 ASIKAAVDTIIAEEGRIDVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-RSGRIINISSM-G  135 (273)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcch-h
Confidence            9999999999999999999999999876 6788899999999999999999999999999999877 56899999987 4


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      +..+.+....|++||+++++|+++++.|+.+.||+|++|+||+++|++.
T Consensus       136 ~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~  184 (273)
T PRK06182        136 GKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWG  184 (273)
T ss_pred             hcCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccc
Confidence            5566777789999999999999999999999999999999999999975

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=257.28  Aligned_cols=243  Identities=23%  Similarity=0.314  Sum_probs=191.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||.++|++|+++|++|++++|+.++++...+++..                 .+.++.+++||
T Consensus         7 ~~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~-----------------~~~~~~~~~~D   69 (259)
T PRK08213          7 LFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEA-----------------LGIDALWIAAD   69 (259)
T ss_pred             hhCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEEcc
Confidence            3567899999999999999999999999999999999998887777666654                 23567889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHH-HHcCCCCcEEEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV-MRDQPKGGHIFNM  186 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~-m~~~~~~g~Iv~i  186 (368)
                      ++|+++++++++++.++++++|++|||||... ..+..+.+.+.+++.+++|+.+++.+++++.|+ |.++ +.+++|++
T Consensus        70 l~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~-~~~~~v~~  147 (259)
T PRK08213         70 VADEADIERLAEETLERFGHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPR-GYGRIINV  147 (259)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhc-CCeEEEEE
Confidence            99999999999999999999999999999865 466778899999999999999999999999998 6655 56899999


Q ss_pred             cCCCCCCCCCC----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          187 DGAGSGGSSTP----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       187 sS~~~~~~~~~----~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||. ++..+.+    ....|+++|++++++++++++++.++||+++.++||+++|++.........+          +..
T Consensus       148 sS~-~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~----------~~~  216 (259)
T PRK08213        148 ASV-AGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGE----------DLL  216 (259)
T ss_pred             CCh-hhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHH----------HHH
Confidence            886 3333333    3489999999999999999999999999999999999999875322110000          011


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCC
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  300 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  300 (368)
                      ...+..+...+++++....|++++...+..|..+..+|
T Consensus       217 ~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        217 AHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            12233444556667766777777665555555554444

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3e-33  Score=256.46  Aligned_cols=241  Identities=18%  Similarity=0.241  Sum_probs=189.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++....               ....+.+++||++|
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl~d   66 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEF---------------KSKKLSLVELDITD   66 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhc---------------CCCceeEEEecCCC
Confidence            568999999999999999999999999999999999988888777775421               12346677999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCC--CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +++++++++++.++++++|++|||||...  ...++.+.+.++++..+++|+.+++.++++++|+|+++ +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS  145 (256)
T PRK09186         67 QESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISS  145 (256)
T ss_pred             HHHHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEec
Confidence            99999999999999999999999998642  12467788999999999999999999999999999877 4679999998


Q ss_pred             CCCCCCCC----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCC
Q 017635          189 AGSGGSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       189 ~~~~~~~~----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      .. +..+.          .....|++||+++++++++++.|+.++||+|+.++||.+.|+....        +..     
T Consensus       146 ~~-~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~--------~~~-----  211 (256)
T PRK09186        146 IY-GVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA--------FLN-----  211 (256)
T ss_pred             hh-hhccccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH--------HHH-----
Confidence            63 32111          1224799999999999999999999999999999999998764210        000     


Q ss_pred             HHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          259 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                       ......+..++..+++++..+.|++++...+.++..+..+|++
T Consensus       212 -~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~  254 (256)
T PRK09186        212 -AYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDGF  254 (256)
T ss_pred             -HHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEecCCc
Confidence             0001112234456677777888888777666667666666653

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=256.33  Aligned_cols=232  Identities=24%  Similarity=0.277  Sum_probs=187.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||++++++|+++|++|++++|+....                          ...++.++.+|+
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~~~~~~~~~~D~   54 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--------------------------LSGNFHFLQLDL   54 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------cCCcEEEEECCh
Confidence            457889999999999999999999999999999999975321                          113577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +++      ++++.+.++++|++|||||......++.+.+.+++++.+++|+.++++++++++|.|+++ +.++||++||
T Consensus        55 ~~~------~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  127 (235)
T PRK06550         55 SDD------LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCS  127 (235)
T ss_pred             HHH------HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            987      444555678999999999975434567788999999999999999999999999999876 5689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|+++|+++++++++++.|+.++||+|++|+||+++|++......  ......      ......++.
T Consensus       128 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~------~~~~~~~~~  198 (235)
T PRK06550        128 I-ASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFE--PGGLAD------WVARETPIK  198 (235)
T ss_pred             h-hhccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccC--chHHHH------HHhccCCcC
Confidence            7 5666778889999999999999999999999999999999999999997532211  011100      111223456


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++..++++++.+.|++++...+.++..+..+|++
T Consensus       199 ~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        199 RWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             CCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            6778888999999999988878888887777775

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=254.66  Aligned_cols=187  Identities=27%  Similarity=0.342  Sum_probs=167.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+|+++||||+||||++++++|+++|++|++++|+.++++.+.+.                    .+.++.++.+|++|.
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~--------------------~~~~~~~~~~D~~d~   62 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL--------------------HPDRALARLLDVTDF   62 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh--------------------cCCCeeEEEccCCCH
Confidence            468999999999999999999999999999999998766543221                    124678899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++.++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.|++++++.++|+|+++ +.++||++||. +
T Consensus        63 ~~~~~~~~~~~~~~~~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~iSS~-~  139 (277)
T PRK06180         63 DAIDAVVADAEATFGPIDVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRAR-RRGHIVNITSM-G  139 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCCEEEEEecc-c
Confidence            9999999999999999999999999876 5778889999999999999999999999999999877 46899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +..+.++...|+++|+++++++++++.|+.+.|++|++|+||+++|++..
T Consensus       140 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~  189 (277)
T PRK06180        140 GLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAG  189 (277)
T ss_pred             ccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence            66778889999999999999999999999999999999999999998753

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=2.6e-33  Score=255.88  Aligned_cols=242  Identities=22%  Similarity=0.336  Sum_probs=198.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|+++||||++|||++++++|+++|++|++++|+.++.+++.+++.+                 .+.++.++++|++|
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~d~~~   63 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA-----------------KGGNAQAFACDITD   63 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence            4689999999999999999999999999999999999887777666654                 23568889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++|+++||. 
T Consensus        64 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~-  140 (250)
T TIGR03206        64 RDSVDTAVAAAEQALGPVDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASD-  140 (250)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECch-
Confidence            99999999999999999999999999865 5677788999999999999999999999999999876 56899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-----HHH
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----ART  265 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~~  265 (368)
                      ++..+.+....|+++|+|+++++++++.++.+.||+++.++||+++|++........         ..++..     ...
T Consensus       141 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~  211 (250)
T TIGR03206       141 AARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGA---------ENPEKLREAFTRAI  211 (250)
T ss_pred             hhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhcc---------CChHHHHHHHHhcC
Confidence            566777888999999999999999999999888999999999999999764321100         011111     122


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +.+++..++++++.+.+++++...++++..+..+|+
T Consensus       212 ~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       212 PLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             CccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            234456677788888888887766666665555543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=1.4e-33  Score=260.72  Aligned_cols=239  Identities=18%  Similarity=0.220  Sum_probs=179.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++++||||++|||++++++|+++|++|++++| +.+++++..+++...                .+.++.++.+|++|.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dv~d~~   65 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR----------------RPNSAVTCQADLSNSA   65 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc----------------cCCceEEEEccCCCch
Confidence            68999999999999999999999999999865 456666666666431                2345677999999998


Q ss_pred             HH----HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCH-----------HHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635          113 DV----QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-----------EEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus       113 ~v----~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      ++    +++++.+.+.+|++|+||||||... ..++.+.+.           +++++++++|+.+++.+++.++|.|+..
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~  144 (267)
T TIGR02685        66 TLFSRCEAIIDACFRAFGRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGT  144 (267)
T ss_pred             hhHHHHHHHHHHHHHccCCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhc
Confidence            65    5566666677899999999999865 344443333           3589999999999999999999999643


Q ss_pred             -----CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhh
Q 017635          178 -----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF  252 (368)
Q Consensus       178 -----~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~  252 (368)
                           +..++|++++|. .+..+.+...+|++||+|+++|+++|+.|+.++||+|++|+||++.|+....  ....... 
T Consensus       145 ~~~~~~~~~~iv~~~s~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~--~~~~~~~-  220 (267)
T TIGR02685       145 RAEQRSTNLSIVNLCDA-MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP--FEVQEDY-  220 (267)
T ss_pred             ccccCCCCeEEEEehhh-hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc--hhHHHHH-
Confidence                 134689999887 4667778889999999999999999999999999999999999998763211  0000000 


Q ss_pred             hhhcCCHHHHHHHhh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          253 NIICELPETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       253 ~~~~~~pe~~a~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                               ....++ .++..+++++..+.|++++...+.+|..+..+|++
T Consensus       221 ---------~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~  262 (267)
T TIGR02685       221 ---------RRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL  262 (267)
T ss_pred             ---------HHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence                     011122 23456677777777888777667777777666654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=258.13  Aligned_cols=250  Identities=20%  Similarity=0.274  Sum_probs=196.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.++.+...+++....               .+.++.++++|+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl   67 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALK---------------GAGAVRYEPADV   67 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcc---------------CCCceEEEEcCC
Confidence            45678999999999999999999999999999999999888777666654310               124678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|++|||||......++.+.+.++++.++++|+.+++.+++.+++.|.++ +.++|+++||
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS  146 (276)
T PRK05875         68 TDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISS  146 (276)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEec
Confidence            999999999999999999999999999975434567788999999999999999999999999999876 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . +...+.+....|+++|++++.+++.++.++.+.||++++|+||+++|++.......  ....      .+.....+++
T Consensus       147 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~------~~~~~~~~~~  217 (276)
T PRK05875        147 I-AASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES--PELS------ADYRACTPLP  217 (276)
T ss_pred             h-hhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC--HHHH------HHHHcCCCCC
Confidence            7 45566677899999999999999999999999999999999999999986432110  0000      0001112334


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +...+++++..+.|+++......++..+..++++.
T Consensus       218 ~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  252 (276)
T PRK05875        218 RVGEVEDVANLAMFLLSDAASWITGQVINVDGGHM  252 (276)
T ss_pred             CCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCee
Confidence            45556777777777777655444555555555443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=255.77  Aligned_cols=248  Identities=23%  Similarity=0.379  Sum_probs=195.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||+++||++++++|+++|++|++++|++++.++..+++++                 .+.++.++++|++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   66 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK-----------------AGGKAIGVAMDVT   66 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh-----------------cCceEEEEECCCC
Confidence            46789999999999999999999999999999999999888888777754                 3456888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHH-HcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM-RDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m-~~~~~~g~Iv~isS  188 (368)
                      |.++++++++++.++++++|+||||||... ..++.+.+.++++..+++|+.+++.+++.++|.| ++. +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~~~~iv~~ss  144 (262)
T PRK13394         67 NEDAVNAGIDKVAERFGSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-RGGVVIYMGS  144 (262)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-CCcEEEEEcc
Confidence            999999999999999999999999999865 5677788899999999999999999999999999 554 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh-
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~-  267 (368)
                      . .+..+.+....|+++|++++++++.++.++.+.||++++++||++.|++........    ........+...+.++ 
T Consensus       145 ~-~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  219 (262)
T PRK13394        145 V-HSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQ----AKELGISEEEVVKKVML  219 (262)
T ss_pred             h-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhh----hhccCCChHHHHHHHHh
Confidence            7 456667778899999999999999999999989999999999999999764321110    0001112222222222 


Q ss_pred             -----hhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          268 -----PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       268 -----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                           ..+..++|++.++.++++......++..+..+++
T Consensus       220 ~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        220 GKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence                 2344566667766666665443334444444443

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-32  Score=248.52  Aligned_cols=220  Identities=25%  Similarity=0.354  Sum_probs=185.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.+++.+++++                 .+.++.++.+|++|+
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~   67 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS-----------------TGVKAAAYSIDLSNP   67 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------CCCcEEEEEccCCCH
Confidence            468999999999999999999999999999999998887776666643                 235688899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++.++++.+.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||. .
T Consensus        68 ~~~~~~~~~~~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-~  144 (241)
T PRK07454         68 EAIAPGIAELLEQFGCPDVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSSI-A  144 (241)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEccH-H
Confidence            9999999999999999999999999876 4677788999999999999999999999999999876 46899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      +..+.++...|+++|++++.++++++.++.+.||++++|+||+++|++.......  .........+|+++|+.++..+.
T Consensus       145 ~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~--~~~~~~~~~~~~~va~~~~~l~~  222 (241)
T PRK07454        145 ARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQ--ADFDRSAMLSPEQVAQTILHLAQ  222 (241)
T ss_pred             hCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccccc--cccccccCCCHHHHHHHHHHHHc
Confidence            6667788899999999999999999999999999999999999999986432111  11111123468888888876664


Q ss_pred             hc
Q 017635          272 VV  273 (368)
Q Consensus       272 ~~  273 (368)
                      .+
T Consensus       223 ~~  224 (241)
T PRK07454        223 LP  224 (241)
T ss_pred             CC
Confidence            43

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-33  Score=253.73  Aligned_cols=193  Identities=25%  Similarity=0.396  Sum_probs=174.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..++++.                 .+.++.++++|++
T Consensus         4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   66 (250)
T PRK12939          4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA-----------------AGGRAHAIAADLA   66 (250)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            35789999999999999999999999999999999999888877777654                 2356889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+.++++|++|||+|... ..++.+.+.++++..+++|+.+++.+++.+.|.|.++ +.|++|++||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~  144 (250)
T PRK12939         67 DPASVQRFFDAAAAALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDS-GRGRIVNLASD  144 (250)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEECch
Confidence            999999999999999999999999999876 4677888999999999999999999999999999876 47899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       .+..+.+....|+++|++++++++.++.++.+.+|+|++|+||+++|++...
T Consensus       145 -~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~  196 (250)
T PRK12939        145 -TALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAY  196 (250)
T ss_pred             -hhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccc
Confidence             5667777888999999999999999999999999999999999999998754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-33  Score=254.22  Aligned_cols=191  Identities=28%  Similarity=0.426  Sum_probs=163.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|+++||||++|||+++|++|+++|++|+++. |+.+++++..++++.                 .+.++.+++||++|.
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA-----------------AGGRACVVAGDVANE   64 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEeccCCH
Confidence            37999999999999999999999999998764 666666666666643                 235688999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEEcCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA  189 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS~  189 (368)
                      ++++++++++.+.++++|++|||||...+..++.+.+.++++..+++|+.+++.+++.+++.|..++  +.++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~  144 (248)
T PRK06947         65 ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSI  144 (248)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence            9999999999999999999999999865345677889999999999999999999999999987542  25789999987


Q ss_pred             CCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                       ++..+.+ .+..|++||+++++|+++++.++.+.||+|+.|+||+++|++..
T Consensus       145 -~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  196 (248)
T PRK06947        145 -ASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA  196 (248)
T ss_pred             -hhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence             3444444 35689999999999999999999999999999999999999864

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.5e-33  Score=253.88  Aligned_cols=243  Identities=19%  Similarity=0.272  Sum_probs=190.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ++||||++|||+++++.|+++|++|++++|+ .+++++..+++.+..               ....+..+++|++|.+++
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~~~   66 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAH---------------GEGVAFAAVQDVTDEAQW   66 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC---------------CCceEEEEEeecCCHHHH
Confidence            8999999999999999999999999999998 666666665554321               112456689999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||. ++..
T Consensus        67 ~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~ss~-~~~~  143 (251)
T PRK07069         67 QALLAQAADAMGGLSVLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-QPASIVNISSV-AAFK  143 (251)
T ss_pred             HHHHHHHHHHcCCccEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEecCh-hhcc
Confidence            9999999999999999999999876 5778888999999999999999999999999999876 46899999987 5666


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccCcccccCcccch-hhhhhhhcCCHHHHHHHhhhhhh
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      +.++...|+++|+++++++++++.|+.+++  |+|+.|+||+++|++......... ....      +......+..++.
T Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  217 (251)
T PRK07069        144 AEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEAT------RKLARGVPLGRLG  217 (251)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHH------HHHhccCCCCCCc
Confidence            778889999999999999999999998765  999999999999998643211000 0000      0000112234455


Q ss_pred             hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          272 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       272 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..+.||.++...+.++..+..+|++
T Consensus       218 ~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        218 EPDDVAHAVLYLASDESRFVTGAELVIDGGI  248 (251)
T ss_pred             CHHHHHHHHHHHcCccccCccCCEEEECCCe
Confidence            6677777777777766656666666555543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-31  Score=243.52  Aligned_cols=215  Identities=27%  Similarity=0.335  Sum_probs=184.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|++|.+
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~   66 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARY---------------PGIKVAVAALDVNDHD   66 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEEcCCCCHH
Confidence            5899999999999999999999999999999999988887777665421               2457899999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.++++++|++|||||+.. ..++.+.+.+.+++.+++|+.+++.+++.++|.|+++ +.++||++||. .+
T Consensus        67 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~-~~  143 (248)
T PRK08251         67 QVFEVFAEFRDELGGLDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQ-GSGHLVLISSV-SA  143 (248)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEecc-cc
Confidence            999999999999999999999999976 4667778889999999999999999999999999876 46899999987 45


Q ss_pred             CCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          193 GSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       193 ~~~~~~-~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      ..+.+. ...|++||++++++++.++.++.+.||+|++|+||+++|++......       .....+|+++++.++..+.
T Consensus       144 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~a~~i~~~~~  216 (248)
T PRK08251        144 VRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------TPFMVDTETGVKALVKAIE  216 (248)
T ss_pred             ccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------CCccCCHHHHHHHHHHHHh
Confidence            555554 67899999999999999999999899999999999999998754321       1123479999999987775


Q ss_pred             h
Q 017635          272 V  272 (368)
Q Consensus       272 ~  272 (368)
                      .
T Consensus       217 ~  217 (248)
T PRK08251        217 K  217 (248)
T ss_pred             c
Confidence            3

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=251.72  Aligned_cols=248  Identities=27%  Similarity=0.388  Sum_probs=196.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|+++||||+++||+++|++|+++|++|++++|+.++.++..++++.                 .+.++..+.||++|
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~~   64 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK-----------------AGGKAIGVAMDVTD   64 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence            4679999999999999999999999999999999999888877777654                 34578889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.+++.+++.++|.|+++ +.++||++||. 
T Consensus        65 ~~~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~-  141 (258)
T PRK12429         65 EEAINAGIDYAVETFGGVDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQ-GGGRIINMASV-  141 (258)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCeEEEEEcch-
Confidence            99999999999999999999999999876 5677888999999999999999999999999999887 57899999887 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh----
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL----  266 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~----  266 (368)
                      .+..+.++...|+++|++++++++.++.|+.+.||+|++++||++.|++........    .......++......    
T Consensus       142 ~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  217 (258)
T PRK12429        142 HGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDL----AKERGISEEEVLEDVLLPL  217 (258)
T ss_pred             hhccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhh----ccccCCChHHHHHHHHhcc
Confidence            566778889999999999999999999999999999999999999999864321110    000001122222111    


Q ss_pred             --hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 --VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                        ...+..++++++.+.+++.+.....++..+..+|++
T Consensus       218 ~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  255 (258)
T PRK12429        218 VPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGGW  255 (258)
T ss_pred             CCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence              123334556666666666554444445555555554

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=252.90  Aligned_cols=248  Identities=22%  Similarity=0.277  Sum_probs=193.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+++|+++||||++|||++++++|+++|++ |++++|+.++.++..+++.+                 .+.++.++.+|+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   65 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEA-----------------LGAKAVFVQADL   65 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHh-----------------cCCeEEEEEccC
Confidence            367899999999999999999999999999 99999998877766666643                 345788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +++++++++++.+.++++++|++|||||... ..++.+.+.++++..+++|+.+++.+++.++|.|.+++..+++|++||
T Consensus        66 ~~~~~~~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss  144 (260)
T PRK06198         66 SDVEDCRRVVAAADEAFGRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS  144 (260)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence            9999999999999999999999999999876 567778899999999999999999999999999987645689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-HHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-ARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-a~~~~  267 (368)
                      . ++..+.+....|+++|+++++|+++++.|+.+.||+|++++||++.|++...............    .+.. ...++
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~  219 (260)
T PRK06198        145 M-SAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDW----LEKAAATQPF  219 (260)
T ss_pred             c-ccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHH----HHHHhccCCc
Confidence            7 4566677889999999999999999999999999999999999999987421100000000000    0010 11123


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCC
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  300 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  300 (368)
                      .+...+++++..+.++.++.....++..+..++
T Consensus       220 ~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~  252 (260)
T PRK06198        220 GRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQ  252 (260)
T ss_pred             cCCcCHHHHHHHHHHHcChhhCCccCceEeECC
Confidence            344556666777777776655455555544444

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-32  Score=245.25  Aligned_cols=194  Identities=18%  Similarity=0.279  Sum_probs=170.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.                .+.++.++.+|++
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~~   66 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA----------------GHPEPFAIRFDLM   66 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc----------------CCCCcceEEeeec
Confidence            467899999999999999999999999999999999998888777776542                1235677899998


Q ss_pred             C--HHHHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          110 E--PADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       110 ~--~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      +  .++++++++++.+.+ +++|++|||||......++.+.+.+++++.+++|+.|++.+++.++|.|.+. +.++++++
T Consensus        67 ~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~  145 (239)
T PRK08703         67 SAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFV  145 (239)
T ss_pred             ccchHHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence            6  568999999998888 8899999999986535678889999999999999999999999999999876 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC-CeEEEEEecCcccCcccc
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS-KVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~-gI~v~~v~PG~v~T~~~~  241 (368)
                      +|. .+..+.+....|++||++++.|+++++.|+.++ +|+|++|+||+|+|++..
T Consensus       146 ss~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~  200 (239)
T PRK08703        146 GES-HGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRI  200 (239)
T ss_pred             ecc-ccccCCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccc
Confidence            887 567777888899999999999999999999887 699999999999999864

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-32  Score=250.83  Aligned_cols=183  Identities=25%  Similarity=0.351  Sum_probs=166.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+++||||+||||++++++|+++|++|++++|+.++.+.                         ..+++++++|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------------------------~~~~~~~~~D~~d~   57 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------------------------IPGVELLELDVTDD   57 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------------------------cCCCeeEEeecCCH
Confidence            46899999999999999999999999999999998754321                         13567899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++.+.+.+|++|+||||||... ..++.+.+.+++++.+++|+.|++.+++.++|+|+++ +.++||++||. .
T Consensus        58 ~~~~~~~~~~~~~~g~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~isS~-~  134 (270)
T PRK06179         58 ASVQAAVDEVIARAGRIDVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQ-GSGRIINISSV-L  134 (270)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEECCc-c
Confidence            9999999999999999999999999976 5778889999999999999999999999999999887 57899999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +..+.|....|++||+++++++++++.|++++||+|++|+||+++|++...
T Consensus       135 ~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~  185 (270)
T PRK06179        135 GFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDAN  185 (270)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccc
Confidence            667788889999999999999999999999999999999999999998754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=6.9e-33  Score=252.16  Aligned_cols=189  Identities=24%  Similarity=0.393  Sum_probs=168.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|+.|++.+|+.+++++..+++                    +.++.++.+|++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL--------------------GERVKIFPANLS   62 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEccCC
Confidence            567899999999999999999999999999999999987776544332                    235778899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++++++.+.+.|.++ +.++||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~  140 (245)
T PRK12936         63 DRDEVKALGQKAEADLEGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRR-RYGRIINITSV  140 (245)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHh-CCCEEEEECCH
Confidence            999999999999999999999999999876 4667788899999999999999999999999988766 46899999986


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                       ++..+.+....|+++|+++.++++.++.++.+.|+++++++||+++|++..
T Consensus       141 -~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~  191 (245)
T PRK12936        141 -VGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTG  191 (245)
T ss_pred             -HhCcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhc
Confidence             566677888999999999999999999999999999999999999998764

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-32  Score=251.16  Aligned_cols=191  Identities=28%  Similarity=0.436  Sum_probs=162.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|++|||||++|||.+++++|+++|++|+++.+ ++++.++..+++..                 .+.++.++++|++|.
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~   64 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRR-----------------QGGEALAVAADVADE   64 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHh-----------------CCCcEEEEEeccCCH
Confidence            479999999999999999999999999988874 45555555455543                 234677899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEEcCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGA  189 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS~  189 (368)
                      ++++++++++.++++++|++|||||...+..++.+.+.+++++.+++|+.+++.+++.++|.|.++.  ++|+|+++||.
T Consensus        65 ~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~  144 (248)
T PRK06123         65 ADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSM  144 (248)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECch
Confidence            9999999999999999999999999865345677889999999999999999999999999997542  35789999987


Q ss_pred             CCCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~~~~~-~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                       ++..+.+. ...|+++|+++++|+++++.++.+.||+|++|+||++.|++..
T Consensus       145 -~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~  196 (248)
T PRK06123        145 -AARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA  196 (248)
T ss_pred             -hhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence             45555555 3679999999999999999999999999999999999999753

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-31  Score=246.85  Aligned_cols=216  Identities=25%  Similarity=0.265  Sum_probs=182.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||++++++|+++|++|++++|+.+++++..+++.                   +.++.++++|++|.++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~~   62 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-------------------AGNAWTGALDVTDRAA   62 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-------------------CCceEEEEecCCCHHH
Confidence            789999999999999999999999999999999887776655432                   2468899999999999


Q ss_pred             HHHHHHHHHhH-cCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          114 VQKLSNFAVNE-FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       114 v~~~~~~i~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++++++.+.+. ++++|+||||||... ..++.+.+.+++++++++|+.+++.+++.+.|+|+++ +.++||++||. .+
T Consensus        63 v~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~~  139 (260)
T PRK08267         63 WDAALADFAAATGGRLDVLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSA-SA  139 (260)
T ss_pred             HHHHHHHHHHHcCCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCch-hh
Confidence            99999988776 789999999999876 5778888999999999999999999999999999877 57899999887 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch-hhh-hhhhcCCHHHHHHHhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQM-FNIICELPETVARTLVPRI  270 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~-~~~~~~~pe~~a~~~~~~~  270 (368)
                      ..+.+....|++||+++++|+++++.++.++||++++|+||+++|++......... ... ......+|+++|+.++..+
T Consensus       140 ~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~  219 (260)
T PRK08267        140 IYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAV  219 (260)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHH
Confidence            67778889999999999999999999999999999999999999998754111111 111 1112347899999888776


Q ss_pred             h
Q 017635          271 R  271 (368)
Q Consensus       271 ~  271 (368)
                      .
T Consensus       220 ~  220 (260)
T PRK08267        220 Q  220 (260)
T ss_pred             h
Confidence            4

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.9e-32  Score=249.98  Aligned_cols=191  Identities=26%  Similarity=0.433  Sum_probs=168.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|+++||||++|||.++|++|+++|++|++..+ +++..++..+++++                 .+.++.++.+|++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~~   66 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGK-----------------EGHDVYAVQADVS   66 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            56899999999999999999999999999987654 45556655555543                 3457899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+.++++|++|||||... ...+.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~  144 (247)
T PRK12935         67 KVEDANRLVEEAVNHFGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSI  144 (247)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcch
Confidence            999999999999999999999999999876 4667788899999999999999999999999999876 46899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                       .+..+.++...|++||+++++++++++.++.+.||+++.++||+++|++..
T Consensus       145 -~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~  195 (247)
T PRK12935        145 -IGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVA  195 (247)
T ss_pred             -hhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhh
Confidence             455667788999999999999999999999999999999999999998754

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-31  Score=242.56  Aligned_cols=221  Identities=29%  Similarity=0.463  Sum_probs=187.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.++.++..+++..                 .+.++.++.+|++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEA-----------------YGVKVVIATADVS   66 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCeEEEEECCCC
Confidence            35789999999999999999999999999999999999888777776643                 3457889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++++++++++++.++++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.|+|.++ +.+++|++||.
T Consensus        67 ~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~ss~  144 (239)
T PRK07666         67 DYEEVTAAIEQLKNELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIER-QSGDIINISST  144 (239)
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEEcch
Confidence            999999999999999999999999999865 4667788999999999999999999999999999877 57899999887


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       .+..+.+....|+++|++++.+++.++.|+.+.||++++|+||++.|++......... .  .....+++++|+.++..
T Consensus       145 -~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~-~--~~~~~~~~~~a~~~~~~  220 (239)
T PRK07666        145 -AGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLTDG-N--PDKVMQPEDLAEFIVAQ  220 (239)
T ss_pred             -hhccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccccc-C--CCCCCCHHHHHHHHHHH
Confidence             5666777888999999999999999999999999999999999999997643211100 0  11123689999988877


Q ss_pred             hhhc
Q 017635          270 IRVV  273 (368)
Q Consensus       270 ~~~~  273 (368)
                      +..+
T Consensus       221 l~~~  224 (239)
T PRK07666        221 LKLN  224 (239)
T ss_pred             HhCC
Confidence            7543

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=2.8e-32  Score=246.52  Aligned_cols=213  Identities=29%  Similarity=0.370  Sum_probs=184.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++++||||+.|||++.|++||++|.+|++++|++++++++.+|+.+.+                +.++.++.+|.++.
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~----------------~vev~~i~~Dft~~  111 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY----------------KVEVRIIAIDFTKG  111 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh----------------CcEEEEEEEecCCC
Confidence            36999999999999999999999999999999999999999999998864                36899999999998


Q ss_pred             HHH-HHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          112 ADV-QKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       112 ~~v-~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +.+ +++.+.+. . ..|.+||||+|+.. .+..+.+.+.+.++..+.+|.++...+++.++|.|.++ +.|.|+|++|.
T Consensus       112 ~~~ye~i~~~l~-~-~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS~  188 (312)
T KOG1014|consen  112 DEVYEKLLEKLA-G-LDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGSF  188 (312)
T ss_pred             chhHHHHHHHhc-C-CceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEeccc
Confidence            763 33333322 2 35778999999976 24567788888999999999999999999999999987 68999999988


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.|.++.|++||+.++.|+++|+.|+..+||.|.++.|.+|.|+|.....       ...+..+|+..++..+.-
T Consensus       189 -ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~-------~sl~~ps~~tfaksal~t  260 (312)
T KOG1014|consen  189 -AGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRK-------PSLFVPSPETFAKSALNT  260 (312)
T ss_pred             -cccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccCC-------CCCcCcCHHHHHHHHHhh
Confidence             799999999999999999999999999999999999999999999999974332       234556899999998876


Q ss_pred             hh
Q 017635          270 IR  271 (368)
Q Consensus       270 ~~  271 (368)
                      ++
T Consensus       261 iG  262 (312)
T KOG1014|consen  261 IG  262 (312)
T ss_pred             cC
Confidence            65

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=7.7e-32  Score=232.11  Aligned_cols=212  Identities=25%  Similarity=0.341  Sum_probs=172.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEE-EEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-GDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-G~~Vi-l~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+|.++||||++|||+.++++|.+. |..++ .+.|++++.   .+++....+              .+.+++.+++|++
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~--------------~d~rvHii~Ldvt   64 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSK--------------SDSRVHIIQLDVT   64 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhc--------------cCCceEEEEEecc
Confidence            4577999999999999999999975 55555 456667775   233322211              3578999999999


Q ss_pred             CHHHHHHHHHHHHhH--cCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---------
Q 017635          110 EPADVQKLSNFAVNE--FGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---------  178 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~--~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---------  178 (368)
                      +.+++.++++++.+-  ...+|+||||||+..++....+.+.+.|.+.+++|..|+++++|+++|++++..         
T Consensus        65 ~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s  144 (249)
T KOG1611|consen   65 CDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLS  144 (249)
T ss_pred             cHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccc
Confidence            999999999999887  457999999999987777778888899999999999999999999999998642         


Q ss_pred             -CCcEEEEEcCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          179 -KGGHIFNMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       179 -~~g~Iv~isS~~~~~~~--~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                       ....|||+||..++..+  .....+|.+||+|+++|+|+++.|+++.+|-|..+|||||+|+|.....           
T Consensus       145 ~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a-----------  213 (249)
T KOG1611|consen  145 VSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKA-----------  213 (249)
T ss_pred             ccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCc-----------
Confidence             13489999887544332  3456899999999999999999999999999999999999999975322           


Q ss_pred             cCCHHHHHHHhhhhhh
Q 017635          256 CELPETVARTLVPRIR  271 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~  271 (368)
                      ..++|+-+..++.-+.
T Consensus       214 ~ltveeSts~l~~~i~  229 (249)
T KOG1611|consen  214 ALTVEESTSKLLASIN  229 (249)
T ss_pred             ccchhhhHHHHHHHHH
Confidence            1268888888876554

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.3e-32  Score=248.73  Aligned_cols=238  Identities=22%  Similarity=0.298  Sum_probs=187.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |+++||||++|||+++|++|+++|++|++++|+... .++...++..                 .+.++.++.+|++|.+
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   65 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGF-----------------TEDQVRLKELDVTDTE   65 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhc-----------------cCCeEEEEEcCCCCHH
Confidence            689999999999999999999999999999998541 2211111111                 2356889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++.+.++++++|++|||||... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||. .+
T Consensus        66 ~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss~-~~  142 (245)
T PRK12824         66 ECAEALAEIEEEEGPVDILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISSV-NG  142 (245)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECCh-hh
Confidence            999999999999999999999999876 5677888999999999999999999999999999876 57899999987 46


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.++.+.|+++|++++++++.++.++.+.||+++.++||++.|++......    ...      ....+..+.+....
T Consensus       143 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~----~~~------~~~~~~~~~~~~~~  212 (245)
T PRK12824        143 LKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP----EVL------QSIVNQIPMKRLGT  212 (245)
T ss_pred             ccCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH----HHH------HHHHhcCCCCCCCC
Confidence            67778889999999999999999999999999999999999999997643211    100      01111223344455


Q ss_pred             cccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          273 VKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      ++++++.+.||+.+...+.+|..+..+|+
T Consensus       213 ~~~va~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12824        213 PEEIAAAVAFLVSEAAGFITGETISINGG  241 (245)
T ss_pred             HHHHHHHHHHHcCccccCccCcEEEECCC
Confidence            66666667777766554555555555544

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-32  Score=248.20  Aligned_cols=191  Identities=26%  Similarity=0.432  Sum_probs=167.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||++++++|+++|++|++++|+.++.+++.+++.+                 .+.++..+.+|+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl   64 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA-----------------DGGTAIAVQVDV   64 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCC
Confidence            356789999999999999999999999999999999998877766666543                 224577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC--CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG--FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      +|.++++++++++.+.++++|+||||||....  ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++
T Consensus        65 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~  143 (250)
T PRK07774         65 SDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKR-GGGAIVNQ  143 (250)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHh-CCcEEEEE
Confidence            99999999999999999999999999998531  3466778899999999999999999999999999876 47899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      ||.. ..   +..+.|++||++++++++++++++.+.||+++.++||.++|++..
T Consensus       144 sS~~-~~---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  194 (250)
T PRK07774        144 SSTA-AW---LYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATR  194 (250)
T ss_pred             eccc-cc---CCccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccc
Confidence            9863 32   345789999999999999999999999999999999999999864

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=247.79  Aligned_cols=187  Identities=29%  Similarity=0.444  Sum_probs=168.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+|+++||||++|||++++++|+++|++|++++|+.+++++..+++                    +.++.++++|++|.
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~   61 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY--------------------GDRLLPLALDVTDR   61 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc--------------------cCCeeEEEccCCCH
Confidence            4689999999999999999999999999999999987765543322                    23577889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++.+.+.++++|++|||||... .+++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||. +
T Consensus        62 ~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~  138 (275)
T PRK08263         62 AAVFAAVETAVEHFGRLDIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQ-RSGHIIQISSI-G  138 (275)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcCh-h
Confidence            9999999999999999999999999876 6788899999999999999999999999999999877 46799999987 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +..+.+....|+++|++++++++.++.|+.+.||+|+.++||+++|++..
T Consensus       139 ~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~  188 (275)
T PRK08263        139 GISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAG  188 (275)
T ss_pred             hcCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence            67778888999999999999999999999999999999999999999874

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-31  Score=248.17  Aligned_cols=182  Identities=29%  Similarity=0.416  Sum_probs=163.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |++|||||++|||++++++|+++|++|++++|+.+++++.    .+                   ..+.++.+|++|.++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~-------------------~~~~~~~~Dl~~~~~   58 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL----AA-------------------AGFTAVQLDVNDGAA   58 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-------------------CCCeEEEeeCCCHHH
Confidence            7999999999999999999999999999999998765432    11                   135678999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++.+.+.++++|++|||||... .+++.+.+.+++++.+++|+.|++.+++.++|.|++.  .|+||++||. ++.
T Consensus        59 ~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~-~~~  134 (274)
T PRK05693         59 LARLAEELEAEHGGLDVLINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSV-SGV  134 (274)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCc-ccc
Confidence            99999999999999999999999876 5778888999999999999999999999999999754  5899999887 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      .+.+....|++||++++.|+++++.|++++||+|++++||+|+|++...
T Consensus       135 ~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        135 LVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccc
Confidence            7778889999999999999999999999999999999999999998754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=3.6e-32  Score=280.46  Aligned_cols=256  Identities=21%  Similarity=0.251  Sum_probs=205.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               ...++..+++|
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~---------------~~~~~~~v~~D  473 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQF---------------GAGRAVALKMD  473 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhc---------------CCCcEEEEECC
Confidence            345789999999999999999999999999999999999988877776665421               12357789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+++|++|+||||||... ..++.+.+.++|+..+++|+.+++.+++.++|.|++++.+++||++|
T Consensus       474 vtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iS  552 (676)
T TIGR02632       474 VTDEQAVKAAFADVALAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIA  552 (676)
T ss_pred             CCCHHHHHHHHHHHHHhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            99999999999999999999999999999865 47788889999999999999999999999999998775568999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC--cccccCcccchhhhhhhhcCCHH-----
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT--DLLLSGSTIQNKQMFNIICELPE-----  260 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T--~~~~~~~~~~~~~~~~~~~~~pe-----  260 (368)
                      |. .+..+.++...|++||+++++++++++.|+.+.||+||+|+||.|.|  .++......  ..... ....++     
T Consensus       553 S~-~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~--~~~~~-~~~~~~~~~~~  628 (676)
T TIGR02632       553 SK-NAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWRE--ERAAA-YGIPADELEEH  628 (676)
T ss_pred             Ch-hhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchh--hhhhc-ccCChHHHHHH
Confidence            87 56677788899999999999999999999999999999999999965  333211100  00000 000111     


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...+.++++...++++++.+.|++++.....++..+..||++.
T Consensus       629 ~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       629 YAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence            2233456666778899999999988766677777777777653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.4e-33  Score=235.15  Aligned_cols=185  Identities=29%  Similarity=0.365  Sum_probs=167.7

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas-~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ..|.|+|||++ ||||.++|++|+++|+.|+.++|+.+...++..+                      ..+....+|+++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----------------------~gl~~~kLDV~~   63 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----------------------FGLKPYKLDVSK   63 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----------------------hCCeeEEeccCC
Confidence            46889999985 7999999999999999999999998887655432                      247789999999


Q ss_pred             HHHHHHHHHHHHh-HcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          111 PADVQKLSNFAVN-EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       111 ~~~v~~~~~~i~~-~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +++|.++..++.+ .+|++|+|+||||..- ..|..|.+.++.++.|++|++|+++++|++...+.+  .+|.|||+.|.
T Consensus        64 ~~~V~~v~~evr~~~~Gkld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik--aKGtIVnvgSl  140 (289)
T KOG1209|consen   64 PEEVVTVSGEVRANPDGKLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK--AKGTIVNVGSL  140 (289)
T ss_pred             hHHHHHHHHHHhhCCCCceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH--ccceEEEecce
Confidence            9999999999888 7899999999999976 578889999999999999999999999999966665  47999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       .+..+.|..+.|.+||+|++++++.|+.|+++.||+|..+-||.|.|++...
T Consensus       141 -~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  141 -AGVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             -eEEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccccC
Confidence             6889999999999999999999999999999999999999999999998755

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=4.9e-32  Score=246.09  Aligned_cols=238  Identities=23%  Similarity=0.314  Sum_probs=189.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |++|||||++|||+++|++|+++|++|++++| +.++.++..+++..                 .+.++.++.+|++|++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   63 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGA-----------------LGFDFRVVEGDVSSFE   63 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------hCCceEEEEecCCCHH
Confidence            68999999999999999999999999999988 55555555444432                 2356888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++|+++||. .+
T Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~-~~  140 (242)
T TIGR01829        64 SCKAAVAKVEAELGPIDVLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV-NG  140 (242)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch-hh
Confidence            999999999999999999999999866 4667788999999999999999999999999999876 46899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.++...|+++|++++.+++++++++.+.||+++.++||++.|++......    ....      ......+..++..
T Consensus       141 ~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~----~~~~------~~~~~~~~~~~~~  210 (242)
T TIGR01829       141 QKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMRE----DVLN------SIVAQIPVGRLGR  210 (242)
T ss_pred             cCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccch----HHHH------HHHhcCCCCCCcC
Confidence            66778889999999999999999999999999999999999999998643211    1100      0111123344556


Q ss_pred             cccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          273 VKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +++++..+.|++++...+.+|..+..+|+
T Consensus       211 ~~~~a~~~~~l~~~~~~~~~G~~~~~~gg  239 (242)
T TIGR01829       211 PEEIAAAVAFLASEEAGYITGATLSINGG  239 (242)
T ss_pred             HHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            66677777777776654555555554443

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.8e-31  Score=239.63  Aligned_cols=193  Identities=25%  Similarity=0.411  Sum_probs=169.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++++++||||++|||+++++.|+++|++|++++|+.+++++..++++.                 .+.++.++++|+
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   63 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA-----------------LGTEVRGYAANV   63 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEcCC
Confidence            357899999999999999999999999999999999999888777776654                 245788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC--------C-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------L-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      ++.++++++++.+.+.++++|++|||||... ...        + .+.+.++++.++++|+.+++.+.+.++|.|.++..
T Consensus        64 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~  142 (253)
T PRK08217         64 TDEEDVEATFAQIAEDFGQLNGLINNAGILR-DGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGS  142 (253)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCccC-cCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC
Confidence            9999999999999888899999999999754 121        1 56788999999999999999999999999987645


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      .+.|+++||.  +..+.+....|++||+|+++++++|+.++.++||++++++||+++|++..
T Consensus       143 ~~~iv~~ss~--~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~  202 (253)
T PRK08217        143 KGVIINISSI--ARAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTA  202 (253)
T ss_pred             CeEEEEEccc--cccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccc
Confidence            6789999876  34566788999999999999999999999999999999999999999864

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=237.81  Aligned_cols=212  Identities=22%  Similarity=0.257  Sum_probs=181.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++...                .+.++.++++|++|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~~   64 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR----------------GAVAVSTHELDILDTA   64 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCeEEEEecCCCChH
Confidence            378999999999999999999999999999999998887776666442                2357889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+   ++|++|||||... ..++.+.+.+++.+.+++|+.+++.+++.+.|.|.++ +.++|+++||. .+
T Consensus        65 ~~~~~~~~~~~---~~d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~  138 (243)
T PRK07102         65 SHAAFLDSLPA---LPDIVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSV-AG  138 (243)
T ss_pred             HHHHHHHHHhh---cCCEEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecc-cc
Confidence            99999988754   4799999999866 4667788999999999999999999999999999876 57899999987 46


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.+....|+++|+++++++++++.|+.+.||+|++|+||+++|++.....      .......+|+++++.++..+..
T Consensus       139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~a~~i~~~~~~  212 (243)
T PRK07102        139 DRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------LPGPLTAQPEEVAKDIFRAIEK  212 (243)
T ss_pred             cCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhccC------CCccccCCHHHHHHHHHHHHhC
Confidence            6677888899999999999999999999999999999999999999764321      1122344799999999877754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.5e-31  Score=238.81  Aligned_cols=224  Identities=23%  Similarity=0.237  Sum_probs=196.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++++|||+|+|||+++|+++..+|++|.++.|+.+++.++.++++-...               ..++.+..+|+.|.++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~---------------~~~v~~~S~d~~~Y~~   98 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQ---------------VEDVSYKSVDVIDYDS   98 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhc---------------cceeeEeccccccHHH
Confidence            7999999999999999999999999999999999999999998865422               1237899999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +...++++.+.++.+|.+|||||... .+.+.+.++++++..+++|++|+++++++.+|.|++..+.|+|+.+||. .+.
T Consensus        99 v~~~~~~l~~~~~~~d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~-~a~  176 (331)
T KOG1210|consen   99 VSKVIEELRDLEGPIDNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQ-LAM  176 (331)
T ss_pred             HHHHHhhhhhccCCcceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhh-hhh
Confidence            99999999999999999999999988 6899999999999999999999999999999999988667899999987 688


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhh--h--hhcCCHHHHHHHhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF--N--IICELPETVARTLVPR  269 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~--~--~~~~~pe~~a~~~~~~  269 (368)
                      .+..++++|+++|+|+.+|+.++++|+.++||+|....|+.++||.+.......+....  +  .-...+|++|.++++.
T Consensus       177 ~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~  256 (331)
T KOG1210|consen  177 LGIYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKG  256 (331)
T ss_pred             cCcccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhH
Confidence            89999999999999999999999999999999999999999999987654433322110  0  0113699999999987


Q ss_pred             hhhcc
Q 017635          270 IRVVK  274 (368)
Q Consensus       270 ~~~~~  274 (368)
                      +...+
T Consensus       257 ~~rg~  261 (331)
T KOG1210|consen  257 MKRGN  261 (331)
T ss_pred             HhhcC
Confidence            76543

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.8e-32  Score=245.05  Aligned_cols=194  Identities=29%  Similarity=0.467  Sum_probs=173.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++.+|+++||||++|||++++++|+++|++|+++ +|+.++.++..+++..                 .+.++.++.+|
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE-----------------EGGDAIAVKAD   63 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEECC
Confidence            45778999999999999999999999999999999 9998887776666643                 23568889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.+++|++|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~s  141 (247)
T PRK05565         64 VSSEEDVENLVEQIVEKFGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKR-KSGVIVNIS  141 (247)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEC
Confidence            99999999999999999999999999999875 5677888999999999999999999999999999876 578999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      |. ....+.+....|+++|++++.++++++.++.+.||++++++||+++|++...
T Consensus       142 S~-~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~  195 (247)
T PRK05565        142 SI-WGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSS  195 (247)
T ss_pred             CH-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccc
Confidence            87 4556677888999999999999999999999899999999999999987654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=6.8e-31  Score=240.17  Aligned_cols=185  Identities=28%  Similarity=0.429  Sum_probs=163.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++++||||++|||.++|++|+++|++|++++|+++++++..+++                    +.++.++.+|++|.++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dl~~~~~   60 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL--------------------GDNLYIAQLDVRNRAA   60 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------ccceEEEEecCCCHHH
Confidence            36999999999999999999999999999999988766544432                    2367889999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.+.++++|++|||||......++.+.+.+++++++++|+.|++.+++.++|+|.++ +.++||++||. ++.
T Consensus        61 i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~-~~~  138 (248)
T PRK10538         61 IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST-AGS  138 (248)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECCc-ccC
Confidence            9999999999999999999999985434567788999999999999999999999999999876 46899999987 466


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .+.++...|+++|+++++|++.++.++.++||+|++|+||.+.|+..
T Consensus       139 ~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~  185 (248)
T PRK10538        139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEF  185 (248)
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence            67778889999999999999999999999999999999999985443

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-31  Score=274.19  Aligned_cols=217  Identities=22%  Similarity=0.310  Sum_probs=186.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~  430 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA-----------------KGGTAHAYTCDLT  430 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEecCC
Confidence            56789999999999999999999999999999999999988887777754                 2457889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCC--CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF--TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~--~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      |.++++++++++.+++|++|++|||||... ...+.+.  +.+++++.+++|+.|++.+++.++|.|+++ +.++||++|
T Consensus       431 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  508 (657)
T PRK07201        431 DSAAVDHTVKDILAEHGHVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVS  508 (657)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEC
Confidence            999999999999999999999999999864 2333322  257899999999999999999999999877 578999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+..+.|++||+++++|+++++.|+.++||+|++|+||+|+|++.......     ......+||++|+.++
T Consensus       509 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~~-----~~~~~~~~~~~a~~i~  582 (657)
T PRK07201        509 SI-GVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKRY-----NNVPTISPEEAADMVV  582 (657)
T ss_pred             Ch-hhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccccc-----cCCCCCCHHHHHHHHH
Confidence            87 56677788899999999999999999999999999999999999999987532111     1122347999999998


Q ss_pred             hhhh
Q 017635          268 PRIR  271 (368)
Q Consensus       268 ~~~~  271 (368)
                      ..+.
T Consensus       583 ~~~~  586 (657)
T PRK07201        583 RAIV  586 (657)
T ss_pred             HHHH
Confidence            7664

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.8e-30  Score=239.75  Aligned_cols=191  Identities=23%  Similarity=0.375  Sum_probs=169.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +.++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++..                 .+.++.++.+|++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   69 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRA-----------------DGGEAVAFPLDVT   69 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            45678999999999999999999999999999999998777666555543                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+.++++|++|||||... ..+..+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++||.
T Consensus        70 ~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~g~iv~isS~  147 (274)
T PRK07775         70 DPDSVKSFVAQAEEALGEIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIER-RRGDLIFVGSD  147 (274)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECCh
Confidence            999999999999998999999999999865 4667788999999999999999999999999999876 56899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                       .+..+.+....|+++|++++++++++++++.+.||++++++||+++|++.
T Consensus       148 -~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~  197 (274)
T PRK07775        148 -VALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMG  197 (274)
T ss_pred             -HhcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCccc
Confidence             56666777889999999999999999999998999999999999999864

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=238.73  Aligned_cols=189  Identities=22%  Similarity=0.327  Sum_probs=164.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +..+|+++||||++|||++++++|+++|++|+++.++ .+.++++.+++..                 .+.++.++.+|+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl   68 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRA-----------------LGRRAVALQADL   68 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCeEEEEEcCC
Confidence            4568999999999999999999999999999887664 5556556555543                 235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.++ ..++|++++|
T Consensus        69 ~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~~s  146 (258)
T PRK09134         69 ADEAEVRALVARASAALGPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPAD-ARGLVVNMID  146 (258)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence            9999999999999999999999999999876 4677888999999999999999999999999999876 4689999987


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      . ....+.|.+..|++||++++++++++++++.+. |+|++++||++.|+.
T Consensus       147 ~-~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~  195 (258)
T PRK09134        147 Q-RVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNAIGPGPTLPSG  195 (258)
T ss_pred             h-hhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeecccccCCc
Confidence            5 455667777899999999999999999999875 999999999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=1.8e-31  Score=244.76  Aligned_cols=191  Identities=25%  Similarity=0.373  Sum_probs=164.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|+++||||++|||.++|++|+++|++|++++|+. +..++..++++.                 .+.++.++.+|++|+
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~   64 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRA-----------------LGVEVIFFPADVADL   64 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHh-----------------cCCceEEEEecCCCH
Confidence            37999999999999999999999999999999874 344444444432                 234688899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-----CcEEEE
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-----GGHIFN  185 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-----~g~Iv~  185 (368)
                      +++.++++++.+.++++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.+++.|.++.+     .++|++
T Consensus        65 ~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~  144 (256)
T PRK12745         65 SAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVF  144 (256)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEE
Confidence            99999999999999999999999997531 346778899999999999999999999999999987633     467999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +||. .+..+.+....|++||+++++++++++.++.++||+|++++||++.|++..
T Consensus       145 ~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~  199 (256)
T PRK12745        145 VSSV-NAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTA  199 (256)
T ss_pred             ECCh-hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccc
Confidence            9987 466677788899999999999999999999999999999999999998754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=1.4e-30  Score=237.76  Aligned_cols=194  Identities=20%  Similarity=0.299  Sum_probs=170.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++++.                ...++.++.+|++
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~d~~   72 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA----------------GGPQPAIIPLDLL   72 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc----------------CCCCceEEEeccc
Confidence            468999999999999999999999999999999999998887777776542                1234566677775


Q ss_pred             --CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 --EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 --~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                        +.++++++++.+.+.++++|+||||||......++.+.+.+++++.+++|+.+++.+++.++|+|.++ +.++|+++|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~-~~~~iv~~s  151 (247)
T PRK08945         73 TATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKS-PAASLVFTS  151 (247)
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhC-CCCEEEEEc
Confidence              88999999999999999999999999986545677788999999999999999999999999999887 578999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      |. .+..+.+....|++||++++++++.++.++...||++++++||+++|++..
T Consensus       152 s~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~  204 (247)
T PRK08945        152 SS-VGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA  204 (247)
T ss_pred             cH-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh
Confidence            87 566677888999999999999999999999999999999999999998753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.4e-31  Score=243.70  Aligned_cols=238  Identities=22%  Similarity=0.295  Sum_probs=186.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+++++..++.                      ...++.+|+
T Consensus         5 ~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~   62 (245)
T PRK07060          5 FDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET----------------------GCEPLRLDV   62 (245)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------------CCeEEEecC
Confidence            4678999999999999999999999999999999999987665433221                      245688999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++.++++++++.    ++++|++|||||... ..+..+.+.+++++.+++|+.+++.+++++++.+++++..++||++||
T Consensus        63 ~~~~~v~~~~~~----~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  137 (245)
T PRK07060         63 GDDAAIRAALAA----AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS  137 (245)
T ss_pred             CCHHHHHHHHHH----hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence            999988887765    478999999999876 566677899999999999999999999999999986644589999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.+....|+++|++++.++++++.++.+.||++++++||++.|++........  ...      .......+..
T Consensus       138 ~-~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~--~~~------~~~~~~~~~~  208 (245)
T PRK07060        138 Q-AALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDP--QKS------GPMLAAIPLG  208 (245)
T ss_pred             H-HHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCH--HHH------HHHHhcCCCC
Confidence            7 466677888999999999999999999999989999999999999999854221110  000      0011112234


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +...+++++..+.+++++.....++..+..+|++
T Consensus       209 ~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK07060        209 RFAEVDDVAAPILFLLSDAASMVSGVSLPVDGGY  242 (245)
T ss_pred             CCCCHHHHHHHHHHHcCcccCCccCcEEeECCCc
Confidence            4556677777777777766555666666666654

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.4e-31  Score=243.66  Aligned_cols=190  Identities=25%  Similarity=0.374  Sum_probs=166.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|+++||||++|||.++|++|+++|++|++. .|+.+++++..+++..                 .+.++.++.+|+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   65 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIES-----------------NGGKAFLIEADL   65 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCc
Confidence            3578999999999999999999999999999775 7887777666666543                 234688899999


Q ss_pred             CCHHHHHHHHHHHHhHc------CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          109 CEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~------g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      +|++++.++++++.+++      +++|++|||||... ..++.+.+.+.++..+++|+.+++++++.++|.|.+   .++
T Consensus        66 ~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~  141 (254)
T PRK12746         66 NSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGR  141 (254)
T ss_pred             CCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCE
Confidence            99999999999998877      47999999999866 467778899999999999999999999999999864   368


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +|++||. .+..+.++...|++||+++++++++++.++.++|++|++++||++.|++..
T Consensus       142 ~v~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~  199 (254)
T PRK12746        142 VINISSA-EVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINA  199 (254)
T ss_pred             EEEECCH-HhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchh
Confidence            9999887 566677888999999999999999999999999999999999999999864

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-30  Score=241.75  Aligned_cols=191  Identities=25%  Similarity=0.337  Sum_probs=170.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.++..+++....               .+.++.++.+|++|+
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~~d~   66 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLN---------------LQQNIKVQQLDVTDQ   66 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCceeEEecCCCCH
Confidence            57899999999999999999999999999999999888777666554310               124688899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++++ ++++.+.++++|++|||||... ...+.+.+.+++++.+++|+.+++.+++.++|.|++. +.++||++||. +
T Consensus        67 ~~~~~-~~~~~~~~~~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~vsS~-~  142 (280)
T PRK06914         67 NSIHN-FQLVLKEIGRIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ-KSGKIINISSI-S  142 (280)
T ss_pred             HHHHH-HHHHHHhcCCeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcc-c
Confidence            99999 8999899999999999999876 4677788999999999999999999999999999876 57899999886 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +..+.++...|++||+++++|+++++.++.++||++++++||+++|+++.
T Consensus       143 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~  192 (280)
T PRK06914        143 GRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWE  192 (280)
T ss_pred             ccCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence            66777888999999999999999999999999999999999999999764

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.6e-30  Score=236.61  Aligned_cols=204  Identities=20%  Similarity=0.283  Sum_probs=169.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++++||||++|||++++++|+++|++|++++|+.+++++..++                     ..++.+++||++|.++
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~---------------------~~~~~~~~~D~~~~~~   60 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ---------------------SANIFTLAFDVTDHPG   60 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---------------------cCCCeEEEeeCCCHHH
Confidence            7899999999999999999999999999999998765543221                     1357789999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++..   .+|.+|||||... ..+..+.+.+++++++++|+.|++++++.++|+|.+   +++||++||. ++.
T Consensus        61 ~~~~~~~~~~---~~d~~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~-~~~  132 (240)
T PRK06101         61 TKAALSQLPF---IPELWIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSI-ASE  132 (240)
T ss_pred             HHHHHHhccc---CCCEEEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEech-hhc
Confidence            9999887642   4799999999754 334456788999999999999999999999999953   4689999887 566


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      .+.+....|++||+++++|+++++.|+.++||+|++++||++.|++.......      .....+|+++|+.++..+..
T Consensus       133 ~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~~------~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        133 LALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNTFA------MPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCCCC------CCcccCHHHHHHHHHHHHhc
Confidence            77788899999999999999999999999999999999999999986532111      11124799999999987764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.98  E-value=6.4e-31  Score=240.42  Aligned_cols=189  Identities=32%  Similarity=0.522  Sum_probs=163.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHHhhhhhhhcCCCCcccccC-ceeEEEec
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVH-AKVAGIAC  106 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~  106 (368)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+.+.  .+...+... .                .+ ..+.+..+
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~   64 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E----------------AGGGRAAAVAA   64 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h----------------cCCCcEEEEEe
Confidence            5688999999999999999999999999999988888664  233222222 0                11 36788899


Q ss_pred             cCCC-HHHHHHHHHHHHhHcCCCCEEEEccCCCCCC-CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          107 DVCE-PADVQKLSNFAVNEFGSIDIWINNAGTNKGF-KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       107 Dv~~-~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      |+++ .++++.+++.+.+.+|++|++|||||... . .++.+.+.+++++++++|+.|++.+++.+.|.|++  +  +||
T Consensus        65 Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~--~Iv  139 (251)
T COG1028          65 DVSDDEESVEALVAAAEEEFGRIDILVNNAGIAG-PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK--Q--RIV  139 (251)
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh--C--eEE
Confidence            9998 99999999999999999999999999976 4 47889999999999999999999999988888883  2  999


Q ss_pred             EEcCCCCCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          185 NMDGAGSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       185 ~isS~~~~~~~~~~-~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ++||. .+. +.+. ..+|++||+|+.+|+++++.|+.++||+|++|+||+++|++...
T Consensus       140 ~isS~-~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~  196 (251)
T COG1028         140 NISSV-AGL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAA  196 (251)
T ss_pred             EECCc-hhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhh
Confidence            99998 455 5566 59999999999999999999999999999999999999998754

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.9e-31  Score=240.39  Aligned_cols=192  Identities=28%  Similarity=0.436  Sum_probs=165.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +++|+++||||++|||+++|++|+++|++|++++|.    .+..++..+++..                 .+.++.++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   66 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEA-----------------AGGKALGLAF   66 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            567899999999999999999999999999997664    3344444444332                 2457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHH-HHHHcCCCCcEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAM-RVMRDQPKGGHIFN  185 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~l-p~m~~~~~~g~Iv~  185 (368)
                      |++|.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+. |.|+++ +.+++|+
T Consensus        67 Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~iv~  144 (249)
T PRK12827         67 DVRDFAATRAALDAGVEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRAR-RGGRIVN  144 (249)
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCeEEEE
Confidence            999999999999999999999999999999876 5778888999999999999999999999999 666555 5689999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +||. .+..+.++...|+++|++++.++++++.++.+.||++++++||+++|++...
T Consensus       145 ~sS~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        145 IASV-AGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADN  200 (249)
T ss_pred             ECCc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccc
Confidence            9887 4566677888999999999999999999999999999999999999997643

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.2e-31  Score=243.57  Aligned_cols=187  Identities=25%  Similarity=0.344  Sum_probs=159.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |+++||||++|||+++|++|+++|++|++++|+.. .+++    +.+.                .+.+++++++|++|.+
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~----------------~~~~~~~~~~D~~~~~   61 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQ----------------YNSNLTFHSLDLQDVH   61 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhc----------------cCCceEEEEecCCCHH
Confidence            78999999999999999999999999999999863 3322    2111                2346788999999999


Q ss_pred             HHHHHHHHHHhHcCCC--C--EEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          113 DVQKLSNFAVNEFGSI--D--IWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~i--D--~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +++++++++.+.++..  +  ++|+|||...+..++.+.+.+++++.+++|+.+++.+++.++|+|++.+..++||++||
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK06924         62 ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISS  141 (251)
T ss_pred             HHHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecc
Confidence            9999999988776532  2  89999998654567888999999999999999999999999999987544679999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~  241 (368)
                      . .+..+.+....|+++|+|+++|++.++.|++  +.||+|++|+||+++|++..
T Consensus       142 ~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~  195 (251)
T PRK06924        142 G-AAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQA  195 (251)
T ss_pred             h-hhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHH
Confidence            7 5677788899999999999999999999975  46899999999999999854

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-30  Score=236.09  Aligned_cols=218  Identities=27%  Similarity=0.418  Sum_probs=182.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++++||||++|||++++++|+++|++|++++|+.++.++..+++..                 .+.++.++.+|++|.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~~~~   63 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD-----------------HGGEALVVPTDVSDAE   63 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCCCHH
Confidence            47899999999999999999999999999999998887777666654                 2356888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCC-CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF-TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~-~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++++++.+.++++++|++|||||... ..++.+. +.+++++.+++|+.+++.+++.++|+|.++  .++||++||. +
T Consensus        64 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~-~  139 (263)
T PRK06181         64 ACERLIEAAVARFGGIDILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSL-A  139 (263)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecc-c
Confidence            999999999999999999999999876 4667777 899999999999999999999999999764  5899999887 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhh-----hhhhhcCCHHHHHHHh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-----MFNIICELPETVARTL  266 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-----~~~~~~~~pe~~a~~~  266 (368)
                      +..+.++...|+++|+++++++++++.++.+.||++++++||++.|++...........     .......+|+++|+.+
T Consensus       140 ~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i  219 (263)
T PRK06181        140 GLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAI  219 (263)
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHH
Confidence            66677888999999999999999999999999999999999999999865321110000     0001224788888888


Q ss_pred             hhhhh
Q 017635          267 VPRIR  271 (368)
Q Consensus       267 ~~~~~  271 (368)
                      +..+.
T Consensus       220 ~~~~~  224 (263)
T PRK06181        220 LPAIA  224 (263)
T ss_pred             HHHhh
Confidence            76664

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-30  Score=237.64  Aligned_cols=186  Identities=25%  Similarity=0.424  Sum_probs=165.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .|++|||||++|||++++++|+++|++|++++|+.+.+++..++.                    +.++.++++|++|.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~   61 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY--------------------GDRLWVLQLDVTDSA   61 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------------------cCceEEEEccCCCHH
Confidence            378999999999999999999999999999999987655433221                    236788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+.++++|+||||||... ..+..+.+.+++++.+++|+.+++++++.++|+|+++ +.++||++||. ++
T Consensus        62 ~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~-~~  138 (276)
T PRK06482         62 AVRAVVDRAFAALGRIDVVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQ-GGGRIVQVSSE-GG  138 (276)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEcCc-cc
Confidence            999999999999999999999999876 5677788899999999999999999999999999876 56899999987 45


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      ..+.|....|++||+++++|++++++++.++||+++.++||.+.|++..
T Consensus       139 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~  187 (276)
T PRK06482        139 QIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA  187 (276)
T ss_pred             ccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcc
Confidence            6677888999999999999999999999999999999999999998753

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=1.2e-30  Score=237.66  Aligned_cols=190  Identities=24%  Similarity=0.345  Sum_probs=164.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |+++||||++|||++++++|+++|++|++ ..|+.++.++...++..                 .+.++..+++|++|++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~~   64 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQ-----------------AGGKAFVLQADISDEN   64 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------CCCeEEEEEccCCCHH
Confidence            68999999999999999999999999987 46777777766666654                 3456888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEEcCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAG  190 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS~~  190 (368)
                      +++++++++.++++++|++|||||......++.+.+.++++..+++|+.+++.+++.+++.|.++.  ++|++|++||. 
T Consensus        65 ~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~-  143 (247)
T PRK09730         65 QVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSA-  143 (247)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECch-
Confidence            999999999999999999999999864356677889999999999999999999999999997652  35789999987 


Q ss_pred             CCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          191 SGGSSTPL-TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       191 ~~~~~~~~-~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      .+..+.+. +..|+++|+++++++++++.++.++||++++++||.+.|++..
T Consensus       144 ~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~  195 (247)
T PRK09730        144 ASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA  195 (247)
T ss_pred             hhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence            34455554 4689999999999999999999999999999999999999754

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=239.75  Aligned_cols=239  Identities=23%  Similarity=0.342  Sum_probs=186.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||++++++|+++|++|++++|+.++.++..+++.                   +.++.++++|++|.+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~D~~~~~   62 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-------------------DARFVPVACDLTDAA   62 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-------------------CCceEEEEecCCCHH
Confidence            5799999999999999999999999999999999888776655542                   246788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++.++++++.++++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+.+++.|.++ +.++|+++||.. +
T Consensus        63 ~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~-~  139 (257)
T PRK07074         63 SLAAALANAAAERGPVDVLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKR-SRGAVVNIGSVN-G  139 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEEcchh-h
Confidence            999999999999999999999999876 4677788999999999999999999999999999876 468999998863 3


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH-HHhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-RTLVPRIR  271 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~~~~~~~~  271 (368)
                      .. ..+...|+++|+++++++++++.++.++||+|++++||++.|++........ ..+.       +... ..+..+..
T Consensus       140 ~~-~~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~  210 (257)
T PRK07074        140 MA-ALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAAN-PQVF-------EELKKWYPLQDFA  210 (257)
T ss_pred             cC-CCCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccC-hHHH-------HHHHhcCCCCCCC
Confidence            22 3456789999999999999999999999999999999999999753321111 1110       0000 11223445


Q ss_pred             hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          272 VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       272 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++|++.+..++.++.....++..+..++++
T Consensus       211 ~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~  241 (257)
T PRK07074        211 TPDDVANAVLFLASPAARAITGVCLPVDGGL  241 (257)
T ss_pred             CHHHHHHHHHHHcCchhcCcCCcEEEeCCCc
Confidence            5666677777777665545455555444443

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4e-31  Score=262.14  Aligned_cols=235  Identities=18%  Similarity=0.282  Sum_probs=190.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++|+++||||++|||+++|++|+++|++|++++|+.  +++++..+++                      ...++.+|
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~----------------------~~~~~~~D  264 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV----------------------GGTALALD  264 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc----------------------CCeEEEEe
Confidence            45789999999999999999999999999999998853  2222222111                      23468899


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++.+.++++++|++|||||+.. ...+.+.+.++|+..+++|+.+++++.+.++|.+..+ ++++||++|
T Consensus       265 v~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~g~iv~~S  342 (450)
T PRK08261        265 ITAPDAPARIAEHLAERHGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALG-DGGRIVGVS  342 (450)
T ss_pred             CCCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhc-CCCEEEEEC
Confidence            99999999999999999999999999999876 5778889999999999999999999999999976554 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH--H
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR--T  265 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~--~  265 (368)
                      |. ++..+.+++..|+++|+++++|+++++.|+.++||++|+|+||+++|++......            ..++..+  .
T Consensus       343 S~-~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~------------~~~~~~~~~~  409 (450)
T PRK08261        343 SI-SGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF------------ATREAGRRMN  409 (450)
T ss_pred             Ch-hhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch------------hHHHHHhhcC
Confidence            87 5666778889999999999999999999999999999999999999987643211            0111111  1


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      .+.+...+++++..+.||+++...++++..+..+|+
T Consensus       410 ~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        410 SLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             CcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            234445677888888899988877777777766664

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.7e-31  Score=238.16  Aligned_cols=178  Identities=21%  Similarity=0.274  Sum_probs=157.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+++||||++|||++++++|+++|++|++++|+.++.                          .  ...++.+|++|.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~--------------------------~--~~~~~~~D~~~~   53 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD--------------------------F--PGELFACDLADI   53 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc--------------------------c--CceEEEeeCCCH
Confidence            578999999999999999999999999999999986530                          0  113578999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.+.+ ++|++|||||... ..++.+.+.+++++.+++|+.+++.+.+.++|.|+++ +.++||++||.. 
T Consensus        54 ~~~~~~~~~~~~~~-~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~-  129 (234)
T PRK07577         54 EQTAATLAQINEIH-PVDAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR-EQGRIVNICSRA-  129 (234)
T ss_pred             HHHHHHHHHHHHhC-CCcEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcccc-
Confidence            99999999988876 6899999999876 5677788999999999999999999999999999877 468999998863 


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       ..+.+....|++||+++++++++++.|+.+.||+|++|+||+++|++...
T Consensus       130 -~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~  179 (234)
T PRK07577        130 -IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQ  179 (234)
T ss_pred             -ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence             34567788999999999999999999999999999999999999998643

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=2.1e-30  Score=235.74  Aligned_cols=194  Identities=29%  Similarity=0.477  Sum_probs=168.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|+++||||+++||++++++|+++|++|+++.|+.++ .+...++++.                 .+.++.++.+|
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGA-----------------LGGKALAVQGD   63 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-----------------cCCceEEEEcC
Confidence            45688999999999999999999999999999888887553 4444444433                 23578889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++.+++.++++++.+.++++|++|||||... ..+..+.+.+++++.+++|+.+++.+.+.++|.+.+. +.++++++|
T Consensus        64 l~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~is  141 (248)
T PRK05557         64 VSDAESVERAVDEAKAEFGGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQ-RSGRIINIS  141 (248)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEEc
Confidence            99999999999999999999999999999876 4667788999999999999999999999999999876 467999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      |. .+..+.+....|+++|++++.+++.+++++.+.|+++++++||+++|++...
T Consensus       142 s~-~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~  195 (248)
T PRK05557        142 SV-VGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA  195 (248)
T ss_pred             cc-ccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc
Confidence            87 5666777889999999999999999999999899999999999999987643

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=2.3e-29  Score=229.99  Aligned_cols=190  Identities=30%  Similarity=0.485  Sum_probs=165.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|++|||||++|||++++++|+++|++|++..|+ .+........+++                 .+.++..+.+|
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   64 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-----------------NGGEGIGVLAD   64 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-----------------cCCeeEEEEec
Confidence            45778999999999999999999999999999887754 4444444444433                 23467789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++++++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.|+|++   .++||++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~s  140 (252)
T PRK06077         65 VSTREGCETLAKATIDRYGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIA  140 (252)
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEc
Confidence            99999999999999999999999999999866 567778888999999999999999999999999964   47999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      |. .+..+.++...|++||++++++++++++|+.+ +|+++.++||+++|++..
T Consensus       141 S~-~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~  192 (252)
T PRK06077        141 SV-AGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGE  192 (252)
T ss_pred             ch-hccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHH
Confidence            87 56778888999999999999999999999988 899999999999999753

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.97  E-value=1.9e-30  Score=236.83  Aligned_cols=193  Identities=26%  Similarity=0.415  Sum_probs=172.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||+++||++++++|+++|++|++++|+.++..+..+++..                 .+.++.++.+|++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~   65 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEA-----------------AGGKARARQVDVR   65 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            35679999999999999999999999999999999998887777776654                 2346888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.++++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+.++|.|.++ +.+++|++||.
T Consensus        66 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~ss~  143 (251)
T PRK12826         66 DRAALKAAVAAGVEDFGRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRA-GGGRIVLTSSV  143 (251)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEech
Confidence            999999999999999999999999999876 4677788999999999999999999999999999877 47899999887


Q ss_pred             CCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~-~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      . +. .+.+....|+++|++++++++.++.++.+.|++++.++||.+.|+....
T Consensus       144 ~-~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  196 (251)
T PRK12826        144 A-GPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGN  196 (251)
T ss_pred             H-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhh
Confidence            4 44 6678888999999999999999999999899999999999999997643

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=5.9e-31  Score=238.43  Aligned_cols=222  Identities=21%  Similarity=0.196  Sum_probs=165.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++++||||++|||+++|++|+++|  ..|++..|+....      .                   ...++.+++||+++.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~-------------------~~~~~~~~~~Dls~~   55 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F-------------------QHDNVQWHALDVTDE   55 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c-------------------ccCceEEEEecCCCH
Confidence            479999999999999999999985  5666666654310      0                   124678899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCC-----CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      ++++++.    ++++++|+||||||....     ..++.+.+.+.+++.+++|+.+++.+++.++|.|+++ +.++|+++
T Consensus        56 ~~~~~~~----~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~i  130 (235)
T PRK09009         56 AEIKQLS----EQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVI  130 (235)
T ss_pred             HHHHHHH----HhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEE
Confidence            9988753    456899999999998641     2456778889999999999999999999999999876 46799999


Q ss_pred             cCCCCC--CCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          187 DGAGSG--GSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       187 sS~~~~--~~~~~~~~~Y~aSKaal~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||..+.  ..+.+++..|+++|+++++|+++|+.|+.+  .+|+|++|+||+++|++........  ....  ..+||++
T Consensus       131 ss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~~~~--~~~~--~~~~~~~  206 (235)
T PRK09009        131 SAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQQNV--PKGK--LFTPEYV  206 (235)
T ss_pred             eecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchhhcc--ccCC--CCCHHHH
Confidence            875322  123466789999999999999999999986  6999999999999999864321100  0001  1256666


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+.++..+              .+...+.++..+..+|.|+
T Consensus       207 a~~~~~l~--------------~~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        207 AQCLLGII--------------ANATPAQSGSFLAYDGETL  233 (235)
T ss_pred             HHHHHHHH--------------HcCChhhCCcEEeeCCcCC
Confidence            66655443              3333344555555556553

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-29  Score=227.82  Aligned_cols=217  Identities=27%  Similarity=0.447  Sum_probs=183.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+.+++++||||+|+||++++++|+++|++|++++|+++++++..+++.+                 . .++.++++|++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~-~~~~~~~~D~~   64 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNN-----------------K-GNVLGLAADVR   64 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhc-----------------c-CcEEEEEccCC
Confidence            45689999999999999999999999999999999999888777666643                 1 46888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+.++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++++++.|.+  +.++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~iv~~ss~  141 (237)
T PRK07326         65 DEADVQRAVDAIVAAFGGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR--GGGYIINISSL  141 (237)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH--CCeEEEEECCh
Confidence            999999999999999999999999999876 567788999999999999999999999999999943  36899999887


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       .+..+.+....|+++|++++++++.++.|+.+.|+++++++||++.|++........     .....+++++++.++..
T Consensus       142 -~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----~~~~~~~~d~a~~~~~~  215 (237)
T PRK07326        142 -AGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----DAWKIQPEDIAQLVLDL  215 (237)
T ss_pred             -hhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----hhccCCHHHHHHHHHHH
Confidence             455667778899999999999999999999999999999999999998754321110     00113688888888777


Q ss_pred             hhhc
Q 017635          270 IRVV  273 (368)
Q Consensus       270 ~~~~  273 (368)
                      +..+
T Consensus       216 l~~~  219 (237)
T PRK07326        216 LKMP  219 (237)
T ss_pred             HhCC
Confidence            6544

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=4.1e-30  Score=220.43  Aligned_cols=163  Identities=36%  Similarity=0.582  Sum_probs=150.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..+++.++++.                 .+.++.++++|+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~-----------------~~~~~~~~~~D~~~   63 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKA-----------------PGAKITFIECDLSD   63 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHH-----------------TTSEEEEEESETTS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccc-----------------cccccccccccccc
Confidence            6899999999999999999999965 78899999  7777778777775                 45789999999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++++.++++++|++|||||... ..++.+.+.+++++++++|+.+++.+.+.++|    + ++|+||++||. 
T Consensus        64 ~~~~~~~~~~~~~~~~~ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~-~~g~iv~~sS~-  136 (167)
T PF00106_consen   64 PESIRALIEEVIKRFGPLDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----Q-GGGKIVNISSI-  136 (167)
T ss_dssp             HHHHHHHHHHHHHHHSSESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----H-TTEEEEEEEEG-
T ss_pred             ccccccccccccccccccccccccccccc-ccccccccchhhhhccccccceeeeeeehhee----c-cccceEEecch-
Confidence            99999999999999999999999999988 78999999999999999999999999999999    2 48999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKES  220 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~  220 (368)
                      ++..+.|++..|++||+|+++|+++|++|+
T Consensus       137 ~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  137 AGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             GGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            688899999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.2e-31  Score=219.44  Aligned_cols=192  Identities=23%  Similarity=0.312  Sum_probs=172.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +.+|-+.+|||+.+|+|++.|++|+++|+.|++.+-..++.++..+++                    +.++.+.+.|++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel--------------------g~~~vf~padvt   65 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL--------------------GGKVVFTPADVT   65 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh--------------------CCceEEeccccC
Confidence            457889999999999999999999999999999999888888877775                    468999999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC-----CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF-----KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PK  179 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~-----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~  179 (368)
                      ++++++.++...+.+||++|.+|||||+...+     +.-...+.|++++.+++|++|+|++++.....|-.+     +.
T Consensus        66 sekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gq  145 (260)
T KOG1199|consen   66 SEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQ  145 (260)
T ss_pred             cHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCc
Confidence            99999999999999999999999999986422     223457889999999999999999999999998643     34


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      .|.|||..|. +.+.+.-++.+|++||.++.+|+--+++++++.|||+++|.||.++||++.+
T Consensus       146 rgviintasv-aafdgq~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllss  207 (260)
T KOG1199|consen  146 RGVIINTASV-AAFDGQTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS  207 (260)
T ss_pred             ceEEEeecee-eeecCccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhh
Confidence            6889999888 6788888999999999999999999999999999999999999999999754

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=9.1e-30  Score=231.32  Aligned_cols=193  Identities=27%  Similarity=0.451  Sum_probs=171.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++.+|++|||||+++||++++++|+++|++|++++|++++.+....+++.                 .+.++.++.+|+
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   63 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRA-----------------AGGEARVLVFDV   63 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----------------cCCceEEEEccC
Confidence            355679999999999999999999999999999999998888776666653                 345788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|++++.++++++.+.++++|++|||||... ..+..+.+.++++..+++|+.+++++++.+.|+|.+. +.++||++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~~ss  141 (246)
T PRK05653         64 SDEAAVRALIEAAVEAFGALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKA-RYGRIVNISS  141 (246)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            9999999999999888999999999999876 4667788999999999999999999999999999776 4689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      . .+..+.+....|+.+|++++.+++++++++.+.|+++++++||.+.+++..
T Consensus       142 ~-~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~  193 (246)
T PRK05653        142 V-SGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE  193 (246)
T ss_pred             H-HhccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence            6 455566778899999999999999999999988999999999999998753

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=3.9e-30  Score=266.54  Aligned_cols=250  Identities=25%  Similarity=0.312  Sum_probs=198.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|+++||||+||||+++|++|+++|++|++++|+.+++++..+++..                 . .++.++.+|++
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~-----------------~-~~v~~v~~Dvt  480 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGG-----------------P-DRALGVACDVT  480 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhc-----------------c-CcEEEEEecCC
Confidence            45789999999999999999999999999999999999887776665532                 1 36788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+.+|++|++|||||... ..++.+.+.+++++.+++|+.|++.+++.++|.|++++.+|+||++||.
T Consensus       481 d~~~v~~~~~~~~~~~g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        481 DEAAVQAAFEEAALAFGGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence            999999999999999999999999999876 5788889999999999999999999999999999987445899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc--cCcccccCcccchhhhhhhhcCCHH-----HH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV--LTDLLLSGSTIQNKQMFNIICELPE-----TV  262 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v--~T~~~~~~~~~~~~~~~~~~~~~pe-----~~  262 (368)
                       .+..+.++...|++||+++++++++++.++.+.||+||.|+||.|  .|+++..........   .....++     ..
T Consensus       560 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~---~~g~~~~~~~~~~~  635 (681)
T PRK08324        560 -NAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAA---AYGLSEEELEEFYR  635 (681)
T ss_pred             -cccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhh---hccCChHHHHHHHH
Confidence             566777888999999999999999999999999999999999999  888764322110000   0001122     11


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ...++++...++++++++.+++++.....++..+..+|+.
T Consensus       636 ~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~  675 (681)
T PRK08324        636 ARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGN  675 (681)
T ss_pred             hcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence            2233444556677777777777654444455555555543

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=224.18  Aligned_cols=186  Identities=21%  Similarity=0.317  Sum_probs=157.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||++|||++++++|+++ ++|++.+|+..                                  .++||++|.+++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------------------------~~~~D~~~~~~~   46 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------------------------DVQVDITDPASI   46 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------------------------ceEecCCChHHH
Confidence            6999999999999999999999 99999998642                                  268899999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      ++++++    ++++|++|||||... ..++.+.+.++|++.+++|+.+++++++.++|+|++   .++|+++||. .+..
T Consensus        47 ~~~~~~----~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~-~~~~  117 (199)
T PRK07578         47 RALFEK----VGKVDAVVSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGI-LSDE  117 (199)
T ss_pred             HHHHHh----cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEccc-ccCC
Confidence            988764    478999999999865 577888999999999999999999999999999974   4789999887 5667


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      +.++...|++||+++++|+++++.|+ ++||+||+|+||+++|++.....     .+......+|+++|+.++..+
T Consensus       118 ~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~a~~~~~~~  187 (199)
T PRK07578        118 PIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYGP-----FFPGFEPVPAARVALAYVRSV  187 (199)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchhhhhh-----cCCCCCCCCHHHHHHHHHHHh
Confidence            78899999999999999999999999 88999999999999998742211     011112247888888776544

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=231.39  Aligned_cols=190  Identities=20%  Similarity=0.311  Sum_probs=168.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||+++||++++++|+++|++|++++|+.++..+..+++..                   ..+..+.+|+
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~D~   63 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-------------------DALRIGGIDL   63 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-------------------cCceEEEeec
Confidence            467899999999999999999999999999999999998877666655543                   2355678999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.++++++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++||++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS  141 (239)
T PRK12828         64 VDPQAARRAVDEVNRQFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTAS-GGGRIVNIGA  141 (239)
T ss_pred             CCHHHHHHHHHHHHHHhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhc-CCCEEEEECc
Confidence            9999999999999999999999999999865 4666778899999999999999999999999999876 4789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      . .+..+.+....|+++|++++.+++.+++++.+.||+++.++||++.|++.
T Consensus       142 ~-~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~  192 (239)
T PRK12828        142 G-AALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPN  192 (239)
T ss_pred             h-HhccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcch
Confidence            7 45566677889999999999999999999988899999999999999864

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.9e-30  Score=235.12  Aligned_cols=192  Identities=29%  Similarity=0.433  Sum_probs=167.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..++...                   .++.++.+|++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-------------------~~~~~~~~D~~   68 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-------------------AKVTATVADVA   68 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-------------------CceEEEEccCC
Confidence            46889999999999999999999999999999999998766655444321                   25788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+.++++|+||||||...+..++.+.+.+++++.+++|+.+++.+++.+++.|...+.+++|+++||.
T Consensus        69 ~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~  148 (264)
T PRK12829         69 DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSV  148 (264)
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccc
Confidence            99999999999999999999999999987435667788999999999999999999999999998876333778888776


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                       ++..+.+....|+.+|++++.+++.++.++.+.++++++++||++.|++..
T Consensus       149 -~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~  199 (264)
T PRK12829        149 -AGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMR  199 (264)
T ss_pred             -ccccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHH
Confidence             566677888899999999999999999999888999999999999999753

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.9e-29  Score=228.56  Aligned_cols=183  Identities=23%  Similarity=0.325  Sum_probs=158.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++++||||++|||+++|++|+++|++|++++|+.++..      ...                .+.++.++++|++|.++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~------~~~----------------~~~~~~~~~~D~~~~~~   59 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL------AAA----------------AGERLAEVELDLSDAAA   59 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh------hhc----------------cCCeEEEEEeccCCHHH
Confidence            47999999999999999999999999999999865311      110                23468889999999999


Q ss_pred             HHHHHHH-HHhHc---CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          114 VQKLSNF-AVNEF---GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       114 v~~~~~~-i~~~~---g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +++++++ +.+.+   +++|++|||||...+..++.+.+.+++++.+++|+.+++.+++.++|.|.++ +.++||++||.
T Consensus        60 ~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~  138 (243)
T PRK07023         60 AAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDA-AERRILHISSG  138 (243)
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhcc-CCCEEEEEeCh
Confidence            9998776 55544   4799999999986644677788999999999999999999999999999876 57899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                       .+..+.+++..|+++|++++++++.++.+ .+.||++++|+||+++|++..
T Consensus       139 -~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~  188 (243)
T PRK07023        139 -AARNAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA  188 (243)
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcEEEEecCCccccHHHH
Confidence             56778888999999999999999999999 778999999999999999753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.5e-29  Score=224.27  Aligned_cols=204  Identities=24%  Similarity=0.274  Sum_probs=165.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||++++++|+++|++|++++|+.++.++. +++                     .++.++.+|++|.++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~---------------------~~~~~~~~D~~d~~~   59 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL---------------------PGVHIEKLDMNDPAS   59 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc---------------------cccceEEcCCCCHHH
Confidence            7899999999999999999999999999999998765432 111                     245678899999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++++++.+.+  +++|++|||||...+ ..++.+.+.+++++.+++|+.+++.+++.++|+|++.  .++++++||..+.
T Consensus        60 ~~~~~~~~~~--~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~  135 (225)
T PRK08177         60 LDQLLQRLQG--QRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGS  135 (225)
T ss_pred             HHHHHHHhhc--CCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccc
Confidence            9999988754  479999999998642 2456788999999999999999999999999999743  4789999876322


Q ss_pred             C--CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          193 G--SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       193 ~--~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      .  .+......|+++|++++.|+++++.|++++||+||+|+||+++|++.....           ..++++.++.++..+
T Consensus       136 ~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~-----------~~~~~~~~~~~~~~~  204 (225)
T PRK08177        136 VELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA-----------PLDVETSVKGLVEQI  204 (225)
T ss_pred             cccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC-----------CCCHHHHHHHHHHHH
Confidence            1  122356789999999999999999999999999999999999999864321           125677777777666


Q ss_pred             hhcc
Q 017635          271 RVVK  274 (368)
Q Consensus       271 ~~~~  274 (368)
                      ....
T Consensus       205 ~~~~  208 (225)
T PRK08177        205 EAAS  208 (225)
T ss_pred             HhCC
Confidence            5444

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-30  Score=230.44  Aligned_cols=174  Identities=26%  Similarity=0.338  Sum_probs=151.0

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHHH
Q 017635           37 VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK  116 (368)
Q Consensus        37 lITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~  116 (368)
                      +||||++|||++++++|+++|++|++++|+.+++++..++++.                  +.+++++.+|++|++++++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dl~~~~~~~~   62 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG------------------GAPVRTAALDITDEAAVDA   62 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc------------------CCceEEEEccCCCHHHHHH
Confidence            6999999999999999999999999999998777665555431                  2467889999999999998


Q ss_pred             HHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC
Q 017635          117 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST  196 (368)
Q Consensus       117 ~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~  196 (368)
                      ++++    .+++|++|||+|... ..++.+.+.+++++++++|+.+++++++  .+.|.   +.++||++||. ++..+.
T Consensus        63 ~~~~----~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~---~~g~iv~~ss~-~~~~~~  131 (230)
T PRK07041         63 FFAE----AGPFDHVVITAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA---PGGSLTFVSGF-AAVRPS  131 (230)
T ss_pred             HHHh----cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc---CCeEEEEECch-hhcCCC
Confidence            8765    478999999999876 4677788999999999999999999999  44553   46899999987 566777


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          197 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       197 ~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +....|+++|+++++++++++.|+.+  |||++++||+++|++..
T Consensus       132 ~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~t~~~~  174 (230)
T PRK07041        132 ASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDTPLWS  174 (230)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccccHHHH
Confidence            88899999999999999999999975  99999999999999864

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=3.1e-29  Score=229.49  Aligned_cols=188  Identities=27%  Similarity=0.436  Sum_probs=167.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+++.+++..                 .+.++..+.+|++|.+
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   63 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATD-----------------AGGSVIYLVADVTKED   63 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEECCCCCHH
Confidence            47899999999999999999999999999999998887776666543                 2356888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+.++++|++|||||... ..+..+.+.+++++.+++|+.|++.+++.++|.|++. +.+++|++||. +.
T Consensus        64 ~~~~~~~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~~v~~ss~-~~  140 (255)
T TIGR01963        64 EIADMIAAAAAEFGGLDILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQ-GWGRIINIASA-HG  140 (255)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEEcch-hh
Confidence            999999999998999999999999865 4566778899999999999999999999999999876 46799999886 45


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ..+.+....|+++|++++++++.++.++.+.||+++.++||++.|++.
T Consensus       141 ~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~  188 (255)
T TIGR01963       141 LVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLV  188 (255)
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHH
Confidence            667788899999999999999999999988899999999999999875

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-29  Score=231.72  Aligned_cols=219  Identities=18%  Similarity=0.217  Sum_probs=167.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+ ..+...++++.                 .+.++.++++|+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   65 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA-----------------AGGRASAVGADL   65 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh-----------------cCCceEEEEcCC
Confidence            367899999999999999999999999999999999753 45555555543                 234678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|++|||||... ..   +.   +++..+++|+.+++++++.+.|+|.+   .++||++||
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~---~~---~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS  135 (248)
T PRK07806         66 TDEESVAALMDTAREEFGGLDALVLNASGGM-ES---GM---DEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTS  135 (248)
T ss_pred             CCHHHHHHHHHHHHHhCCCCcEEEECCCCCC-CC---CC---CcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeC
Confidence            9999999999999999999999999998643 11   11   24568899999999999999999853   478999988


Q ss_pred             CCCCC----CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH--
Q 017635          189 AGSGG----SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV--  262 (368)
Q Consensus       189 ~~~~~----~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~--  262 (368)
                      ..+..    .+.+.+..|++||++++.++++++.|+++.||+|++|+||.+.|++........          .|+..  
T Consensus       136 ~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~----------~~~~~~~  205 (248)
T PRK07806        136 HQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRL----------NPGAIEA  205 (248)
T ss_pred             chhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccC----------CHHHHHH
Confidence            53322    234556789999999999999999999999999999999999998653211000          11111  


Q ss_pred             HHHhhhhhhhcccccceeeeccC
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTP  285 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~  285 (368)
                      .+.+..++..++|++..+.+++.
T Consensus       206 ~~~~~~~~~~~~dva~~~~~l~~  228 (248)
T PRK07806        206 RREAAGKLYTVSEFAAEVARAVT  228 (248)
T ss_pred             HHhhhcccCCHHHHHHHHHHHhh
Confidence            12233455566667766666665

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.1e-28  Score=224.37  Aligned_cols=192  Identities=32%  Similarity=0.482  Sum_probs=165.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|++|||||+++||++++++|+++|++|++..|+..+ .+...+++..                 .+.++.++.+|++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEA-----------------LGRRAQAVQADVT   66 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-----------------cCCceEEEECCcC
Confidence            456899999999999999999999999998887766543 3334444332                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++++++.++|++++. +.+++|++||.
T Consensus        67 ~~~~v~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~i~~SS~  144 (249)
T PRK12825         67 DKAALEAAVAAAVERFGRIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQ-RGGRIVNISSV  144 (249)
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEECcc
Confidence            999999999999888899999999999765 5677788999999999999999999999999999877 47899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       .+..+.+....|+.+|++++++++.+++++.+.|++++.++||.+.|++...
T Consensus       145 -~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~  196 (249)
T PRK12825        145 -AGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEA  196 (249)
T ss_pred             -ccCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccc
Confidence             4556677888999999999999999999999889999999999999998643

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=9.2e-29  Score=225.39  Aligned_cols=191  Identities=26%  Similarity=0.349  Sum_probs=162.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ..++|+++||||++|||++++++|+++|++|++++|+. +..++..+++...                .+..+.++.+|+
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   66 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL----------------RPGSAAALQADL   66 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh----------------cCCceEEEEcCC
Confidence            34679999999999999999999999999999999864 4444444444331                123578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+.++++|++|||||... ..++.+.+.++++..+++|+.|++.+.+++.|.|.++  .++++++++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~  143 (249)
T PRK09135         67 LDPDALPELVAACVAAFGRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITD  143 (249)
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeC
Confidence            9999999999999999999999999999865 4566777889999999999999999999999998764  578888876


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      . ....+.++...|++||++++.+++.++.++.+ ++++++++||++.||+..
T Consensus       144 ~-~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~  194 (249)
T PRK09135        144 I-HAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDG  194 (249)
T ss_pred             h-hhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence            5 45566778889999999999999999999965 699999999999999753

>PRK08264 short chain dehydrogenase; Validated

Probab=99.96  E-value=4.2e-28  Score=220.04  Aligned_cols=205  Identities=25%  Similarity=0.350  Sum_probs=174.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|+++||||++|||+++|++|+++|+ +|++++|+.+++++                        .+.++.++.+|
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------------------------~~~~~~~~~~D   57 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------------------------LGPRVVPLQLD   57 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------------------------cCCceEEEEec
Confidence            567889999999999999999999999999 99999999766432                        02467889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++.    ++++|++|||||......++.+.+.+++++.+++|+.+++.++++++|.|+++ +.++++++|
T Consensus        58 ~~~~~~~~~~~~~----~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~s  132 (238)
T PRK08264         58 VTDPASVAAAAEA----ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAAN-GGGAIVNVL  132 (238)
T ss_pred             CCCHHHHHHHHHh----cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEc
Confidence            9999999887764    46899999999984335678888999999999999999999999999999876 578999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. .+..+.++...|+++|++++++++.++.++.+.|+++++++||.++|++......         ...+++++++.++
T Consensus       133 S~-~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~~---------~~~~~~~~a~~~~  202 (238)
T PRK08264        133 SV-LSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDA---------PKASPADVARQIL  202 (238)
T ss_pred             Ch-hhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCCc---------CCCCHHHHHHHHH
Confidence            87 4667778889999999999999999999999999999999999999998543211         1247899999988


Q ss_pred             hhhhh
Q 017635          268 PRIRV  272 (368)
Q Consensus       268 ~~~~~  272 (368)
                      ..+..
T Consensus       203 ~~~~~  207 (238)
T PRK08264        203 DALEA  207 (238)
T ss_pred             HHHhC
Confidence            77753

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=223.86  Aligned_cols=183  Identities=21%  Similarity=0.326  Sum_probs=159.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||++|||++++++|+++|++|++++|+.++.++..+....                 .+.++.++.+|++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   64 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAAR-----------------RGLALRVEKLDLTDAI   64 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcceEEEeeCCCHH
Confidence            57999999999999999999999999999999998776655444332                 2346888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++      +++|+||||||... ..++.+.+.++++..+++|+.+++.+++.++|.|.++ +.++||++||. .+
T Consensus        65 ~~~~~~~------~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~SS~-~~  135 (257)
T PRK09291         65 DRAQAAE------WDVDVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVAR-GKGKVVFTSSM-AG  135 (257)
T ss_pred             HHHHHhc------CCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEcCh-hh
Confidence            9877653      37999999999876 5788889999999999999999999999999999877 45899999987 45


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      ..+.++...|++||++++++++.++.++.+.||++++|+||++.|++..
T Consensus       136 ~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        136 LITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             ccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchh
Confidence            5666788899999999999999999999999999999999999998753

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.3e-28  Score=222.01  Aligned_cols=200  Identities=19%  Similarity=0.184  Sum_probs=150.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+.++++|+++||||++|||+++|++|+++|++|++++|+..+..+   +. .                 . .....+.+
T Consensus         8 ~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~-----------------~-~~~~~~~~   65 (245)
T PRK12367          8 AQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-D-----------------E-SPNEWIKW   65 (245)
T ss_pred             hHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-c-----------------c-CCCeEEEe
Confidence            3456789999999999999999999999999999999998632111   10 0                 0 11256789


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIF  184 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv  184 (368)
                      |++|.+++++       .++++|++|||||...    ..+.+.+++++.+++|+.|++.+++.++|.|++++  +++.++
T Consensus        66 D~~~~~~~~~-------~~~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~ii  134 (245)
T PRK12367         66 ECGKEESLDK-------QLASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIW  134 (245)
T ss_pred             eCCCHHHHHH-------hcCCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEE
Confidence            9999988753       3578999999999743    23568899999999999999999999999997631  233444


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHH---HHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQ---ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~---~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      +.+|. ++..+ +..+.|++||+|+..+.   +.++.|+.+.|++|+.++||+++|++...            ...+||+
T Consensus       135 v~ss~-a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~~------------~~~~~~~  200 (245)
T PRK12367        135 VNTSE-AEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNPI------------GIMSADF  200 (245)
T ss_pred             EEecc-cccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCcc------------CCCCHHH
Confidence            44444 33333 45678999999986543   45555667889999999999999987311            1237999


Q ss_pred             HHHHhhhhhhhc
Q 017635          262 VARTLVPRIRVV  273 (368)
Q Consensus       262 ~a~~~~~~~~~~  273 (368)
                      +|+.++..+...
T Consensus       201 vA~~i~~~~~~~  212 (245)
T PRK12367        201 VAKQILDQANLG  212 (245)
T ss_pred             HHHHHHHHHhcC
Confidence            999998887544

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=8.5e-28  Score=217.92  Aligned_cols=188  Identities=18%  Similarity=0.258  Sum_probs=160.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||.++++.|+++|++|++++|+.++.++..+++..                  ..++.++++|+
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dl   62 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSK------------------YGNIHYVVGDV   62 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh------------------cCCeEEEECCC
Confidence            457889999999999999999999999999999999998877665555432                  13578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++.++++++++++.+.++++|.+|+|+|... ..+..  +.++++..+++|+.+++.+.+.++|.|.+   ++++|++||
T Consensus        63 ~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss  136 (238)
T PRK05786         63 SSTESARNVIEKAAKVLNAIDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSS  136 (238)
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEec
Confidence            9999999999999888899999999999754 23333  34889999999999999999999999863   478999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ......+.+....|++||++++.++++++.++.+.||++++|+||++.|++.
T Consensus       137 ~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~  188 (238)
T PRK05786        137 MSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFE  188 (238)
T ss_pred             chhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence            6333345677788999999999999999999999999999999999999874

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=2.4e-28  Score=221.26  Aligned_cols=186  Identities=32%  Similarity=0.534  Sum_probs=162.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +||||++++||.+++++|+++|++|++++|+. +.++...+++++                 .+.++.++.+|++|++++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~~~   63 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKA-----------------YGVKALGVVCDVSDREDV   63 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHh-----------------cCCceEEEEecCCCHHHH
Confidence            58999999999999999999999999999875 444444444433                 235688999999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++.+.+.++++|++|||||... ..++.+.+.+++++.+++|+.+++.+++.+.+++.+. +.++++++||. ++..
T Consensus        64 ~~~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~v~~sS~-~~~~  140 (239)
T TIGR01830        64 KAVVEEIEEELGPIDILVNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQ-RSGRIINISSV-VGLM  140 (239)
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCeEEEEECCc-cccC
Confidence            9999999999999999999999865 4566778889999999999999999999999999765 46799999886 4566


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +.+....|+++|++++.+++.++.++...|++++.++||+++|++..
T Consensus       141 g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~  187 (239)
T TIGR01830       141 GNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTD  187 (239)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhh
Confidence            77888999999999999999999999889999999999999998653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.96  E-value=3.4e-28  Score=209.87  Aligned_cols=246  Identities=17%  Similarity=0.189  Sum_probs=207.6

Q ss_pred             cCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..++||++||+|-  .+.|+..||+.|.++|++++.+..++ ++++.++++.+..                 .....++|
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~-----------------~s~~v~~c   63 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL-----------------GSDLVLPC   63 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc-----------------cCCeEEec
Confidence            3578999999997  47999999999999999999999887 6666666665532                 23467899


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |+++.++++++++++.+++|++|.|||+-|..+.   .+.+.+.+.|+|...+++..++...++|++.|.|.   .+|+|
T Consensus        64 DV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~---~ggSi  140 (259)
T COG0623          64 DVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN---NGGSI  140 (259)
T ss_pred             CCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC---CCCcE
Confidence            9999999999999999999999999999998651   35677899999999999999999999999999996   47899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      +.++=. .+....|.+...+.+|++|++-+|-||.+++++|||||.|+-|+|+|=-. ..-... ..+      ..+.-.
T Consensus       141 ltLtYl-gs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAa-sgI~~f-~~~------l~~~e~  211 (259)
T COG0623         141 LTLTYL-GSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAA-SGIGDF-RKM------LKENEA  211 (259)
T ss_pred             EEEEec-cceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHh-hccccH-HHH------HHHHHh
Confidence            999765 46677889999999999999999999999999999999999999999432 211111 111      123345


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +.++++-.+.+++++...||+||....+||..+.+|+++..
T Consensus       212 ~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G~~i  252 (259)
T COG0623         212 NAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             hCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCCcee
Confidence            67888888999999999999999999999999999988744

>PRK08017 oxidoreductase; Provisional

Probab=99.96  E-value=2.5e-27  Score=217.24  Aligned_cols=215  Identities=26%  Similarity=0.318  Sum_probs=176.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||+||||++++++|+++|++|++++|+.++++..    .+                   ..+..+++|++|.++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~~~~~   59 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NS-------------------LGFTGILLDLDDPES   59 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----Hh-------------------CCCeEEEeecCCHHH
Confidence            7899999999999999999999999999999998765432    11                   135678999999999


Q ss_pred             HHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          114 VQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       114 v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++.+++.+.+.. +++|.+|||+|... ..++.+.+.+++++.+++|+.|++.+++.++|.|++. +.++||++||. .+
T Consensus        60 ~~~~~~~i~~~~~~~~~~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~~~iv~~ss~-~~  136 (256)
T PRK08017         60 VERAADEVIALTDNRLYGLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-GEGRIVMTSSV-MG  136 (256)
T ss_pred             HHHHHHHHHHhcCCCCeEEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCEEEEEcCc-cc
Confidence            999998887643 68999999999866 4677888999999999999999999999999999877 46899999887 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc------hhhhhhhhcCCHHHHHHHh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ------NKQMFNIICELPETVARTL  266 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~------~~~~~~~~~~~pe~~a~~~  266 (368)
                      ..+.+....|++||++++.++++++.++.++|+++++++||++.|++........      ...........|+++++.+
T Consensus       137 ~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~  216 (256)
T PRK08017        137 LISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKL  216 (256)
T ss_pred             ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHH
Confidence            6777888999999999999999999999999999999999999998765321110      0011111224688888888


Q ss_pred             hhhhhhcc
Q 017635          267 VPRIRVVK  274 (368)
Q Consensus       267 ~~~~~~~~  274 (368)
                      ...+..++
T Consensus       217 ~~~~~~~~  224 (256)
T PRK08017        217 RHALESPK  224 (256)
T ss_pred             HHHHhCCC
Confidence            77765443

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=4.4e-26  Score=204.91  Aligned_cols=197  Identities=20%  Similarity=0.309  Sum_probs=156.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||++++++|+++|++|++++|+.++.++    +..                   ..+.++.+|+++.++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~~~-------------------~~~~~~~~D~~~~~~   58 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----LQA-------------------LGAEALALDVADPAS   58 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----HHh-------------------ccceEEEecCCCHHH
Confidence            689999999999999999999999999999999776543    221                   124578999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++++++++..  +++|++|||+|.... ..+..+.+.+++++.+++|+.+++.+++.++|+|.+.  .+++++++|.. +
T Consensus        59 v~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~-~  133 (222)
T PRK06953         59 VAGLAWKLDG--EALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRM-G  133 (222)
T ss_pred             HHHHHHHhcC--CCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcc-c
Confidence            9998877643  479999999998631 2455677999999999999999999999999998653  57899998863 3


Q ss_pred             CCCC-C--CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          193 GSST-P--LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       193 ~~~~-~--~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                      ..+. +  ....|+++|++++++++.++.++.  +++|++|+||+++|++..+..           ...+++.+..+...
T Consensus       134 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~~~-----------~~~~~~~~~~~~~~  200 (222)
T PRK06953        134 SIGDATGTTGWLYRASKAALNDALRAASLQAR--HATCIALHPGWVRTDMGGAQA-----------ALDPAQSVAGMRRV  200 (222)
T ss_pred             ccccccCCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEECCCeeecCCCCCCC-----------CCCHHHHHHHHHHH
Confidence            2222 2  123699999999999999998864  699999999999999864321           12567777777665


Q ss_pred             hh
Q 017635          270 IR  271 (368)
Q Consensus       270 ~~  271 (368)
                      +.
T Consensus       201 ~~  202 (222)
T PRK06953        201 IA  202 (222)
T ss_pred             HH
Confidence            43

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2e-25  Score=200.72  Aligned_cols=210  Identities=24%  Similarity=0.362  Sum_probs=166.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||+++||++++++|+++ ++|++++|+.++.++..++.                     ..+.++++|++|.+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~~~   60 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL---------------------PGATPFPVDLTDPE   60 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh---------------------ccceEEecCCCCHH
Confidence            479999999999999999999999 99999999977654432221                     24678899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++.+    +++|++||++|... ..++.+.+.+++++.+++|+.+++.+++.+++.|+++  .++++++||. .+
T Consensus        61 ~~~~~~~~~----~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~-~~  132 (227)
T PRK08219         61 AIAAAVEQL----GRLDVLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSG-AG  132 (227)
T ss_pred             HHHHHHHhc----CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcch-Hh
Confidence            998877643    57999999999866 4667788999999999999999999999999999875  5789999887 45


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.++...|+.+|++++.+++.++.++... |++++++||.++|++...................++++++.++..+..
T Consensus       133 ~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~  211 (227)
T PRK08219        133 LRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDA  211 (227)
T ss_pred             cCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcC
Confidence            6677788999999999999999999988766 999999999999986532211111111111113688888888766644


Q ss_pred             c
Q 017635          273 V  273 (368)
Q Consensus       273 ~  273 (368)
                      +
T Consensus       212 ~  212 (227)
T PRK08219        212 P  212 (227)
T ss_pred             C
Confidence            3

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=4.4e-25  Score=213.43  Aligned_cols=198  Identities=19%  Similarity=0.201  Sum_probs=152.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+++++..   ..                 ....+..+.+|
T Consensus       173 a~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~-----------------~~~~v~~v~~D  232 (406)
T PRK07424        173 ALSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NG-----------------EDLPVKTLHWQ  232 (406)
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hh-----------------cCCCeEEEEee
Confidence            35678999999999999999999999999999999999876653321   11                 11246678999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC---CcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK---GGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~---~g~Iv  184 (368)
                      ++|.+++++.       ++++|++|||||...    ..+.+.+++++.+++|+.|++.+++.++|.|++++.   ++.++
T Consensus       233 vsd~~~v~~~-------l~~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiV  301 (406)
T PRK07424        233 VGQEAALAEL-------LEKVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWV  301 (406)
T ss_pred             CCCHHHHHHH-------hCCCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEE
Confidence            9999887654       357999999999754    236788999999999999999999999999987632   24566


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++|+.  . ...+..+.|++||+|+.+|+. ++++.  .++.|..++||+++|++...            ...+||++|+
T Consensus       302 n~Ssa--~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~~------------~~~spe~vA~  363 (406)
T PRK07424        302 NTSEA--E-VNPAFSPLYELSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNPI------------GVMSADWVAK  363 (406)
T ss_pred             EEccc--c-ccCCCchHHHHHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCcC------------CCCCHHHHHH
Confidence            66542  3 233456789999999999984 54443  35777888999999986311            1137999999


Q ss_pred             Hhhhhhhhcc
Q 017635          265 TLVPRIRVVK  274 (368)
Q Consensus       265 ~~~~~~~~~~  274 (368)
                      .++..+...+
T Consensus       364 ~il~~i~~~~  373 (406)
T PRK07424        364 QILKLAKRDF  373 (406)
T ss_pred             HHHHHHHCCC
Confidence            9998876543

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.94  E-value=7.5e-27  Score=212.71  Aligned_cols=203  Identities=19%  Similarity=0.194  Sum_probs=157.5

Q ss_pred             HHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCC
Q 017635           49 LAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSI  128 (368)
Q Consensus        49 ia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~i  128 (368)
                      +|++|+++|++|++++|+.++.+     +                       ..++++|++|.++++++++++.   +++
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-----------------------~~~~~~Dl~~~~~v~~~~~~~~---~~i   49 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L-----------------------DGFIQADLGDPASIDAAVAALP---GRI   49 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h-----------------------hHhhcccCCCHHHHHHHHHHhc---CCC
Confidence            47899999999999999876531     0                       1247899999999999988764   689


Q ss_pred             CEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC---------------
Q 017635          129 DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG---------------  193 (368)
Q Consensus       129 D~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~---------------  193 (368)
                      |+||||||... .        +++++.+++|+.+++.+++.++|+|.+   .|+||++||..+..               
T Consensus        50 D~li~nAG~~~-~--------~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~  117 (241)
T PRK12428         50 DALFNIAGVPG-T--------APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATA  117 (241)
T ss_pred             eEEEECCCCCC-C--------CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccc
Confidence            99999999753 1        247899999999999999999999963   48999999874321               


Q ss_pred             -----------CCCCCchhhHHHHHHHHHHHHHHH-HHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          194 -----------SSTPLTAVYGSTKCGLRQLQASLF-KESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       194 -----------~~~~~~~~Y~aSKaal~~l~~~la-~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                                 .+.++...|++||+|+++|+++++ .|++++||+||+|+||+++|+|............       .+.
T Consensus       118 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~-------~~~  190 (241)
T PRK12428        118 SFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQER-------VDS  190 (241)
T ss_pred             hHHHHHHhhhccCCCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHh-------hhh
Confidence                       245677899999999999999999 9999999999999999999998643211100000       000


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                       ...++.++..|+++++.+.|++++...+++|..+..+|++
T Consensus       191 -~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        191 -DAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGGL  230 (241)
T ss_pred             -cccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCch
Confidence             1124556678888899999999888777777777776665

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=5.5e-26  Score=196.05  Aligned_cols=190  Identities=19%  Similarity=0.217  Sum_probs=154.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|+||+|+|||..++..+.+++......++++...+  .+.++-                ..+........|++...
T Consensus         6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v----------------~~gd~~v~~~g~~~e~~   67 (253)
T KOG1204|consen    6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKV----------------AYGDDFVHVVGDITEEQ   67 (253)
T ss_pred             ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEE----------------EecCCcceechHHHHHH
Confidence            578999999999999999998888765544444332221  111100                02234455667888878


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCC--CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL--QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~--~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      -+..+++...+++|+.|++|||||...+.....  ..+.++|++.++.|+++.+-+.+.++|.+++++-.+.+||+||. 
T Consensus        68 ~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~-  146 (253)
T KOG1204|consen   68 LLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSL-  146 (253)
T ss_pred             HHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecch-
Confidence            888889988999999999999999876544443  67889999999999999999999999999987556899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +...+++.+++||.+|+|.++|.+.||.|-. .+|+|.++.||.|+|+|...
T Consensus       147 aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~  197 (253)
T KOG1204|consen  147 AAVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVC  197 (253)
T ss_pred             hhhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHH
Confidence            6889999999999999999999999999976 79999999999999999743

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=7.9e-24  Score=239.51  Aligned_cols=200  Identities=16%  Similarity=0.071  Sum_probs=156.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCCh--------------HHHHHHH-HHHHHHhhh------------
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSS--------------ESVRMTV-TELEENLKE------------   83 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~--------------~~~~~~~-~~l~~~~~~------------   83 (368)
                      +++++|||||++|||+++|++|+++ |++|++++|+.              ..++... +.+++....            
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            4899999999999999999999998 69999999982              1111100 000000000            


Q ss_pred             ---hhhhcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhc
Q 017635           84 ---GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL  160 (368)
Q Consensus        84 ---~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~  160 (368)
                         ..+...........+.++.++.||++|.++++++++++.++ ++||+||||||+.. .+.+.+.+.++|++++++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHH
Confidence               00000000000113567899999999999999999999877 68999999999977 57889999999999999999


Q ss_pred             hHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          161 VGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       161 ~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .|.+++++++.+.+     .++||++||. ++..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|.
T Consensus      2154 ~G~~~Ll~al~~~~-----~~~IV~~SSv-ag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2154 DGLLSLLAALNAEN-----IKLLALFSSA-AGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHhC-----CCeEEEEech-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCcc
Confidence            99999998887653     3479999998 6778889999999999999999999999875  49999999999999986


Q ss_pred             c
Q 017635          241 L  241 (368)
Q Consensus       241 ~  241 (368)
                      .
T Consensus      2226 ~ 2226 (2582)
T TIGR02813      2226 N 2226 (2582)
T ss_pred             c
Confidence            4

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=5e-24  Score=186.07  Aligned_cols=196  Identities=19%  Similarity=0.229  Sum_probs=168.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-----eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-----RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-----~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|+++|||++||||.++|++|++...     ++++++|+.++.++++..|++.++.             ...+++++.+|
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~-------------~~i~~~yvlvD   69 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPK-------------STIEVTYVLVD   69 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCC-------------ceeEEEEEEEe
Confidence            48999999999999999999998764     5889999999999999999987664             34689999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCC-------------C-------------CCCCCHHHHHHHHHhhch
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-------------P-------------LLQFTNEEIEQIVSTNLV  161 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~-------------~-------------~~~~~~~~~~~~~~vN~~  161 (368)
                      +++..++.++..++.++|.++|.+..|||++..++             +             -...+.|++..+|++|++
T Consensus        70 ~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVF  149 (341)
T KOG1478|consen   70 VSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVF  149 (341)
T ss_pred             hhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhccc
Confidence            99999999999999999999999999999876211             0             113577889999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC--------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 017635          162 GSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG  233 (368)
Q Consensus       162 g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~--------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG  233 (368)
                      |+|.+++.+.|.+-.+ ....+|.+||..+.....        .+...|..||.+++.+.-++-+.+.+.|+.-++++||
T Consensus       150 Ghfyli~~l~pll~~~-~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg  228 (341)
T KOG1478|consen  150 GHFYLIRELEPLLCHS-DNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPG  228 (341)
T ss_pred             chhhhHhhhhhHhhcC-CCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCc
Confidence            9999999999999876 345999999875443322        4557899999999999999999999999999999999


Q ss_pred             cccCccccc
Q 017635          234 MVLTDLLLS  242 (368)
Q Consensus       234 ~v~T~~~~~  242 (368)
                      ..-|.+...
T Consensus       229 ~~tt~~~~~  237 (341)
T KOG1478|consen  229 IFTTNSFSE  237 (341)
T ss_pred             eeecchhhh
Confidence            998887643

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.3e-22  Score=174.27  Aligned_cols=175  Identities=23%  Similarity=0.229  Sum_probs=145.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHH---HHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTV---TELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      |+++||||++|||++++++|+++|+ .|++++|+.+..+...   +++++                 .+.++.++.+|++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   63 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEA-----------------LGAEVTVVACDVA   63 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHh-----------------cCCeEEEEECCCC
Confidence            5799999999999999999999997 6888888765543322   23322                 2457888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++++++++++++...++++|.+|||||... ..++.+.+.+++++.+++|+.+++.+.+.+.+    . +.++++++||.
T Consensus        64 ~~~~~~~~~~~~~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~ii~~ss~  137 (180)
T smart00822       64 DRAALAAALAAIPARLGPLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRD----L-PLDFFVLFSSV  137 (180)
T ss_pred             CHHHHHHHHHHHHHHcCCeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhcc----C-CcceEEEEccH
Confidence            999999999999888999999999999865 46677889999999999999999999998732    2 46789999887


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                       ++..+.+....|+++|++++.+++.++.    .|+++.++.||+++
T Consensus       138 -~~~~~~~~~~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      138 -AGVLGNPGQANYAAANAFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             -HHhcCCCCchhhHHHHHHHHHHHHHHHh----cCCceEEEeecccc
Confidence             5666778889999999999999877653    57889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.87  E-value=1.3e-20  Score=179.09  Aligned_cols=168  Identities=16%  Similarity=0.195  Sum_probs=132.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|+++||||+|+||++++++|+++|  ++|++.+|+..+.....+++                   ...++.++.+|+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~-------------------~~~~~~~v~~Dl   62 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF-------------------PAPCLRFFIGDV   62 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh-------------------CCCcEEEEEccC
Confidence            468999999999999999999999987  78999999866543322221                   113578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+++.++++       ++|+|||+||...  .+..+.+   .++.+++|+.|++++++++.+.     +.++||++||
T Consensus        63 ~d~~~l~~~~~-------~iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS  125 (324)
T TIGR03589        63 RDKERLTRALR-------GVDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAIDN-----GVKRVVALST  125 (324)
T ss_pred             CCHHHHHHHHh-------cCCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeC
Confidence            99999887764       5899999999753  2222333   3468999999999999998752     3568999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      . ...   .+...|++||++.+.++++++.+....|+++++++||+|..|
T Consensus       126 ~-~~~---~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~  171 (324)
T TIGR03589       126 D-KAA---NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGS  171 (324)
T ss_pred             C-CCC---CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCC
Confidence            6 222   224679999999999999998888888999999999999865

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=1.1e-20  Score=164.47  Aligned_cols=174  Identities=23%  Similarity=0.279  Sum_probs=135.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++|||||.+|||..+++.|+++|. +|++++|+.   ...++..+++++                 .+.++.++.||++|
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~-----------------~g~~v~~~~~Dv~d   64 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELES-----------------AGARVEYVQCDVTD   64 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHH-----------------TT-EEEEEE--TTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHh-----------------CCCceeeeccCccC
Confidence            789999999999999999999984 899999993   244556677765                 46799999999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++.+.+++++||.+||+||... ..++.+.+.++++..+...+.|..++.+.+.+    . ....+|.+||. 
T Consensus        65 ~~~v~~~~~~~~~~~~~i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~-~l~~~i~~SSi-  137 (181)
T PF08659_consen   65 PEAVAAALAQLRQRFGPIDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----R-PLDFFILFSSI-  137 (181)
T ss_dssp             HHHHHHHHHTSHTTSS-EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----T-TTSEEEEEEEH-
T ss_pred             HHHHHHHHHHHHhccCCcceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----C-CCCeEEEECCh-
Confidence            99999999999999999999999999987 68899999999999999999999999887654    2 46788888887 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                      ++..+.+++..|+++.+.++.|++..+.    .|.++.+|+-|..+
T Consensus       138 s~~~G~~gq~~YaaAN~~lda~a~~~~~----~g~~~~sI~wg~W~  179 (181)
T PF08659_consen  138 SSLLGGPGQSAYAAANAFLDALARQRRS----RGLPAVSINWGAWD  179 (181)
T ss_dssp             HHHTT-TTBHHHHHHHHHHHHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred             hHhccCcchHhHHHHHHHHHHHHHHHHh----CCCCEEEEEccccC
Confidence            6778889999999999999999886654    36778888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.86  E-value=5.8e-20  Score=182.20  Aligned_cols=182  Identities=16%  Similarity=0.184  Sum_probs=137.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..+||+++||||+||||++++++|+++|++|++++|+.++++.+.+++.+.....   .+     .....++.++.+|++
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~---~G-----a~~~~~v~iV~gDLt  148 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDV---EG-----TQPVEKLEIVECDLE  148 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhcccc---cc-----ccccCceEEEEecCC
Confidence            3468999999999999999999999999999999999988877766654311000   00     001135788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.+++++.       ++++|+||||+|...  .     ...++...+++|+.|..++++++.+.     +.++||++||.
T Consensus       149 D~esI~~a-------LggiDiVVn~AG~~~--~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSi  209 (576)
T PLN03209        149 KPDQIGPA-------LGNASVVICCIGASE--K-----EVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSL  209 (576)
T ss_pred             CHHHHHHH-------hcCCCEEEEcccccc--c-----cccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccc
Confidence            99887653       367999999999753  1     11246788999999999998887543     46799999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      +....+.+.. .|. +|+++..+.+.+..++...||+++.|+||++.|++.
T Consensus       210 ga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d  258 (576)
T PLN03209        210 GTNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTD  258 (576)
T ss_pred             hhcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcc
Confidence            4322333322 244 888888888999999999999999999999998864

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.85  E-value=1.4e-19  Score=171.01  Aligned_cols=189  Identities=17%  Similarity=0.185  Sum_probs=139.6

Q ss_pred             CCCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCChHHHH------------HHHHHHHHHhhhhhhhcCCCCccc
Q 017635           30 KAGPRNVVITGSTRGLGKA--LAREFLLSGDRVVVASRSSESVR------------MTVTELEENLKEGMMAAGGSSKKN   95 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~a--ia~~la~~G~~Vil~~R~~~~~~------------~~~~~l~~~~~~~~~~~~~~~~~~   95 (368)
                      .-.+|++||||+++|||.+  +|+.| ++|++|+++++..++.+            ...+.+++                
T Consensus        38 ~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~----------------  100 (398)
T PRK13656         38 ANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA----------------  100 (398)
T ss_pred             CCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh----------------
Confidence            3468999999999999999  89999 99999998886432221            12222222                


Q ss_pred             ccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCC------------C----C---------------
Q 017635           96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK------------P----L---------------  144 (368)
Q Consensus        96 ~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~------------~----~---------------  144 (368)
                       .+..+..+.||+++.++++++++++.+++|+||+||||+|......            |    +               
T Consensus       101 -~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~  179 (398)
T PRK13656        101 -AGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEV  179 (398)
T ss_pred             -cCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEE
Confidence             2345778999999999999999999999999999999999863111            0    1               


Q ss_pred             --CCCCHHHHHHHHHhhch-HHHHH--HHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHH
Q 017635          145 --LQFTNEEIEQIVSTNLV-GSILC--TREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLF  217 (368)
Q Consensus       145 --~~~~~~~~~~~~~vN~~-g~~~l--~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSKaal~~l~~~la  217 (368)
                        ...+.++++.++++.=. .-...  .+...+.|.   .+++++.+|..+ .....|.+  ..-+.+|++|+.-++.|+
T Consensus       180 s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla---~g~~~va~TY~G-~~~t~p~Y~~g~mG~AKa~LE~~~r~La  255 (398)
T PRK13656        180 TVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLA---EGAKTVAYSYIG-PELTHPIYWDGTIGKAKKDLDRTALALN  255 (398)
T ss_pred             EEeeCCHHHHHHHHHhhccchHHHHHHHHHhccccc---CCcEEEEEecCC-cceeecccCCchHHHHHHHHHHHHHHHH
Confidence              12455666665554322 11222  333445553   478999998874 44555555  477999999999999999


Q ss_pred             HHhCCCCeEEEEEecCcccCccc
Q 017635          218 KESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       218 ~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .+|++.|||+|++.+|++.|.-.
T Consensus       256 ~~L~~~giran~i~~g~~~T~As  278 (398)
T PRK13656        256 EKLAAKGGDAYVSVLKAVVTQAS  278 (398)
T ss_pred             HHhhhcCCEEEEEecCcccchhh
Confidence            99999999999999999999754

>PRK06720 hypothetical protein; Provisional

Probab=99.85  E-value=6.8e-20  Score=157.40  Aligned_cols=144  Identities=19%  Similarity=0.227  Sum_probs=118.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.+                 .+.+..++.+|
T Consensus        11 ~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   73 (169)
T PRK06720         11 KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN-----------------LGGEALFVSYD   73 (169)
T ss_pred             ccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEcc
Confidence            4567899999999999999999999999999999999998877776666653                 23456788999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC------CCc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP------KGG  181 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~------~~g  181 (368)
                      +++.++++++++++.+.+|++|++|||||+.....++.+.+.++ ++  .+|+.+.+.+++.+.++|.+++      ..|
T Consensus        74 l~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (169)
T PRK06720         74 MEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLP  150 (169)
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCc
Confidence            99999999999999999999999999999876445555555555 44  7788888999999999988763      357


Q ss_pred             EEEEEcCCCC
Q 017635          182 HIFNMDGAGS  191 (368)
Q Consensus       182 ~Iv~isS~~~  191 (368)
                      ++..+|+.++
T Consensus       151 ~~~~~~~~~~  160 (169)
T PRK06720        151 IFGIIGTKGQ  160 (169)
T ss_pred             eeeEeccccc
Confidence            8888877643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.83  E-value=2.5e-19  Score=171.96  Aligned_cols=177  Identities=16%  Similarity=0.074  Sum_probs=136.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|++|||||+|+||.+++++|+++|++|++++|+..........+.                  ...++.++.+|++|
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~   63 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN------------------LAKKIEDHFGDIRD   63 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh------------------hcCCceEEEccCCC
Confidence            367999999999999999999999999999999998765433322221                  11356778999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+++.+++++.     ++|+|||+||...     ...+.+++...+++|+.+++++++++.+    .+..+++|++||..
T Consensus        64 ~~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~iv~~SS~~  129 (349)
T TIGR02622        64 AAKLRKAIAEF-----KPEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRA----IGSVKAVVNVTSDK  129 (349)
T ss_pred             HHHHHHHHhhc-----CCCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHh----cCCCCEEEEEechh
Confidence            99999888754     6899999999633     1345566788999999999999988643    21246899998852


Q ss_pred             CCCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCC----CCeEEEEEecCcccCcc
Q 017635          191 SGGS-----------STPLTAVYGSTKCGLRQLQASLFKESKR----SKVGVHTASPGMVLTDL  239 (368)
Q Consensus       191 ~~~~-----------~~~~~~~Y~aSKaal~~l~~~la~e~~~----~gI~v~~v~PG~v~T~~  239 (368)
                      ....           +..+...|+.||.+.+.+++.++.++.+    +|+++++++|+.+-.|.
T Consensus       130 vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       130 CYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             hhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            2110           1234568999999999999999988755    48999999999988763

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.81  E-value=3.8e-18  Score=162.12  Aligned_cols=175  Identities=13%  Similarity=0.164  Sum_probs=132.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|++|||||+|+||++++++|+++|++|++++|+.++.+... .+.....              ...++.++.+|++|.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~--------------~~~~~~~~~~D~~d~   68 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTD-HLLALDG--------------AKERLKLFKADLLDE   68 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHH-HHHhccC--------------CCCceEEEeCCCCCc
Confidence            4799999999999999999999999999999999876554332 1111000              124678899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++       ++|++|||||...     ...+.+++.+.+++|+.|++++++++.+.+    +.++||++||...
T Consensus        69 ~~~~~~~~-------~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~----~~~~iv~~SS~~~  132 (325)
T PLN02989         69 GSFELAID-------GCETVFHTASPVA-----ITVKTDPQVELINPAVNGTINVLRTCTKVS----SVKRVILTSSMAA  132 (325)
T ss_pred             hHHHHHHc-------CCCEEEEeCCCCC-----CCCCCChHHHHHHHHHHHHHHHHHHHHHcC----CceEEEEecchhh
Confidence            99888765       5899999999643     123345678899999999999999987753    2468999998632


Q ss_pred             CCCCC-------------C--------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          192 GGSST-------------P--------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       192 ~~~~~-------------~--------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ...+.             +        ....|+.||.+.+.+++.++++.   |+.++.++|+.+-.|..
T Consensus       133 ~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        133 VLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             eecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCC
Confidence            21110             0        02469999999999998887654   79999999999988754

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.77  E-value=7.2e-18  Score=161.27  Aligned_cols=183  Identities=13%  Similarity=0.050  Sum_probs=129.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +.++|+||||||+|+||.+++++|+++|++|++++|+.+... ...+.+....             ...+.++.++.+|+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl   69 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDP-------------HPNKARMKLHYGDL   69 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhcccc-------------ccccCceEEEEecC
Confidence            567899999999999999999999999999999998754321 1112221100             00124588899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+     ++|+|||+||....     ....++.+..+++|+.|+.++++++.+.+.+++...++|++||
T Consensus        70 ~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss  139 (340)
T PLN02653         70 SDASSLRRWLDDI-----KPDEVYNLAAQSHV-----AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGS  139 (340)
T ss_pred             CCHHHHHHHHHHc-----CCCEEEECCcccch-----hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEecc
Confidence            9999999888764     59999999997541     1223445778899999999999999887654311236888876


Q ss_pred             CCCCCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCC---CCeEEEEEecCcc
Q 017635          189 AGSGGS---------STPLTAVYGSTKCGLRQLQASLFKESKR---SKVGVHTASPGMV  235 (368)
Q Consensus       189 ~~~~~~---------~~~~~~~Y~aSKaal~~l~~~la~e~~~---~gI~v~~v~PG~v  235 (368)
                      ......         +..+...|+.||.+.+.+++.++.++.-   .++.++.+.||..
T Consensus       140 ~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~  198 (340)
T PLN02653        140 SEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG  198 (340)
T ss_pred             HHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence            421111         1123568999999999999999887642   2345566667643

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.76  E-value=3.9e-17  Score=155.01  Aligned_cols=175  Identities=16%  Similarity=0.195  Sum_probs=128.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ..+|+++||||+|+||.+++++|+++|++|+++.|+.++.+...+ +.....              ...++.++.+|++|
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~--------------~~~~~~~~~~Dl~~   67 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEH-LLALDG--------------AKERLKLFKADLLE   67 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHH-HHhccC--------------CCCceEEEecCCCC
Confidence            468999999999999999999999999999999998765443221 211000              12367889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++       .+|++||+|+... ..    . .+...+.+++|+.|+.++++++...    .+.++||++||..
T Consensus        68 ~~~~~~~~~-------~~d~vih~A~~~~-~~----~-~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~  130 (322)
T PLN02986         68 ESSFEQAIE-------GCDAVFHTASPVF-FT----V-KDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTA  130 (322)
T ss_pred             cchHHHHHh-------CCCEEEEeCCCcC-CC----C-CCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchh
Confidence            998887775       4899999999643 11    1 1223567899999999998876432    1346899999874


Q ss_pred             CCCCCC----------------C-----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          191 SGGSST----------------P-----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       191 ~~~~~~----------------~-----~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ....+.                |     ....|++||.+.+.+++.+.++.   |+++++++|+.+-.|..
T Consensus       131 ~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        131 AVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLL  198 (322)
T ss_pred             heecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCC
Confidence            321110                1     13569999999999888877654   79999999999988864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.76  E-value=1e-16  Score=150.50  Aligned_cols=206  Identities=9%  Similarity=0.035  Sum_probs=140.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      -++|+|+||||+|+||++++++|+++|++|+++.|+.++  ..+...++..                 .+.++.++.+|+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl   66 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSC-----------------EEERLKVFDVDP   66 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhccc-----------------CCCceEEEEecC
Confidence            357899999999999999999999999999999996432  2222222210                 123578889999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+++.+++.       ..|.++|.++...      +.+ +++++.+++|+.|++++++++.+.+    +.++||++||
T Consensus        67 ~d~~~~~~~l~-------~~d~v~~~~~~~~------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~----~v~riV~~SS  128 (297)
T PLN02583         67 LDYHSILDALK-------GCSGLFCCFDPPS------DYP-SYDEKMVDVEVRAAHNVLEACAQTD----TIEKVVFTSS  128 (297)
T ss_pred             CCHHHHHHHHc-------CCCEEEEeCccCC------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEecc
Confidence            99998876543       5799998765422      111 2467899999999999999987753    2468999998


Q ss_pred             CCCCCCC--C-----------CC--------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc
Q 017635          189 AGSGGSS--T-----------PL--------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ  247 (368)
Q Consensus       189 ~~~~~~~--~-----------~~--------~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  247 (368)
                      ..+....  .           +.        ...|+.||...+.++..++++.   |+++++++|+.|..|.........
T Consensus       129 ~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---gi~~v~lrp~~v~Gp~~~~~~~~~  205 (297)
T PLN02583        129 LTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDR---GVNMVSINAGLLMGPSLTQHNPYL  205 (297)
T ss_pred             hHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh---CCcEEEEcCCcccCCCCCCchhhh
Confidence            6332111  0           00        0169999999999888776553   799999999999887543211000


Q ss_pred             hh--hhh---hhhcCCHHHHHHHhhhhhhhcc
Q 017635          248 NK--QMF---NIICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       248 ~~--~~~---~~~~~~pe~~a~~~~~~~~~~~  274 (368)
                      ..  ...   .......+++|+..+..+..+.
T Consensus       206 ~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~  237 (297)
T PLN02583        206 KGAAQMYENGVLVTVDVNFLVDAHIRAFEDVS  237 (297)
T ss_pred             cCCcccCcccCcceEEHHHHHHHHHHHhcCcc
Confidence            00  000   0011257888888887776443

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.75  E-value=1.3e-16  Score=146.16  Aligned_cols=214  Identities=16%  Similarity=0.167  Sum_probs=135.5

Q ss_pred             ccccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 017635           20 GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        20 ~~~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      +....-++..+.++++++||||+|+||++++++|+++|++|+++.|+.++..+...                     .+.
T Consensus         4 ~~~~~~~~~~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---------------------~~~   62 (251)
T PLN00141          4 GAEASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---------------------QDP   62 (251)
T ss_pred             cccccccccccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---------------------cCC
Confidence            33334445556778999999999999999999999999999999999776432211                     113


Q ss_pred             eeEEEeccCCCH-HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 017635          100 KVAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  178 (368)
Q Consensus       100 ~v~~~~~Dv~~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  178 (368)
                      .+.++.+|++|. +++.+.   +.   .++|+||+|+|......+.         ..+++|+.++.++++++.    +. 
T Consensus        63 ~~~~~~~Dl~d~~~~l~~~---~~---~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~----~~-  122 (251)
T PLN00141         63 SLQIVRADVTEGSDKLVEA---IG---DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACR----KA-  122 (251)
T ss_pred             ceEEEEeeCCCCHHHHHHH---hh---cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHH----Hc-
Confidence            578899999983 333222   10   2699999999874311111         124688888888877763    33 


Q ss_pred             CCcEEEEEcCCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccCcccccCcccchhhhhhh
Q 017635          179 KGGHIFNMDGAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI  254 (368)
Q Consensus       179 ~~g~Iv~isS~~~~~--~~~~~~~~Y~aSKaal~~l~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  254 (368)
                      +.++||++||.+...  .+.+....|.+.|.....+...+..|  +...|++++.|+||++.++................
T Consensus       123 ~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~  202 (251)
T PLN00141        123 GVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYE  202 (251)
T ss_pred             CCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCcccc
Confidence            467999999873211  12233455777665444433223222  45679999999999998765322111000000001


Q ss_pred             hcCCHHHHHHHhhhhhhhcc
Q 017635          255 ICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       255 ~~~~pe~~a~~~~~~~~~~~  274 (368)
                      ...+++++|+.++..+..++
T Consensus       203 ~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        203 GSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             CcccHHHHHHHHHHHhcChh
Confidence            12378889988887765544

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.75  E-value=1.3e-16  Score=157.70  Aligned_cols=185  Identities=13%  Similarity=0.120  Sum_probs=131.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH---H----HHHH------HHHHHHHhhhhhhhcCCCCcc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE---S----VRMT------VTELEENLKEGMMAAGGSSKK   94 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~---~----~~~~------~~~l~~~~~~~~~~~~~~~~~   94 (368)
                      ...+++|+||||||+|+||++++++|+++|++|++++|...   .    .+..      .+.+... ..           
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-----------  109 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRW-KE-----------  109 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHH-HH-----------
Confidence            44678899999999999999999999999999999875321   1    0000      0111100 00           


Q ss_pred             cccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHH
Q 017635           95 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM  174 (368)
Q Consensus        95 ~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m  174 (368)
                       ..+.++.++.+|++|.++++++++..     ++|+|||+|+...  .+....++++++..+++|+.|++++++++... 
T Consensus       110 -~~~~~v~~v~~Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-  180 (442)
T PLN02572        110 -VSGKEIELYVGDICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-  180 (442)
T ss_pred             -hhCCcceEEECCCCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-
Confidence             01235788999999999999888763     6999999997643  33444556677888999999999999887553 


Q ss_pred             HcCCCCcEEEEEcCCCCCCC-----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 017635          175 RDQPKGGHIFNMDGAGSGGS-----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  231 (368)
Q Consensus       175 ~~~~~~g~Iv~isS~~~~~~-----------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~  231 (368)
                         +...++|++||......                       +......|+.||.+.+.+++.++..   +|+.+..++
T Consensus       181 ---gv~~~~V~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR  254 (442)
T PLN02572        181 ---APDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLN  254 (442)
T ss_pred             ---CCCccEEEEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEe
Confidence               11247999988632211                       1112357999999999998887765   379999999


Q ss_pred             cCcccCcc
Q 017635          232 PGMVLTDL  239 (368)
Q Consensus       232 PG~v~T~~  239 (368)
                      |+.+--|.
T Consensus       255 ~~~vyGp~  262 (442)
T PLN02572        255 QGVVYGVR  262 (442)
T ss_pred             cccccCCC
Confidence            99886654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.74  E-value=2e-16  Score=152.12  Aligned_cols=179  Identities=13%  Similarity=0.099  Sum_probs=130.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ...+++||||||+|+||.+++++|+++|++|++++|+.++.+....++.                  .+.++.++.+|++
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~   68 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK------------------EGDRLRLFRADLQ   68 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc------------------cCCeEEEEECCCC
Confidence            4567899999999999999999999999999999998765544333321                  1246888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHH--HHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~--~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      |.+++.++++       .+|+|||+|+...........+++.+  ...+++|+.|+.++++++.+..    +.+++|++|
T Consensus        69 ~~~~~~~~~~-------~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~----~~~~~v~~S  137 (353)
T PLN02896         69 EEGSFDEAVK-------GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK----TVKRVVFTS  137 (353)
T ss_pred             CHHHHHHHHc-------CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC----CccEEEEEe
Confidence            9998887764       48999999997542111122233333  4567888899999988876542    246899998


Q ss_pred             CCCCCCC-C--------------C---------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          188 GAGSGGS-S--------------T---------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       188 S~~~~~~-~--------------~---------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      |...... +              .         +....|+.||.+.+.+++.++++.   |+++..++|+.|-.|..
T Consensus       138 S~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        138 SISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFL  211 (353)
T ss_pred             chhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence            8532210 0              0         112379999999999998887654   79999999988877643

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.74  E-value=1.4e-16  Score=152.23  Aligned_cols=174  Identities=14%  Similarity=0.170  Sum_probs=127.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+.+...... .+.. ..              ...++.++.+|++
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~-~~--------------~~~~~~~~~~Dl~   69 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIA-HLRA-LQ--------------ELGDLKIFGADLT   69 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHH-HHHh-cC--------------CCCceEEEEcCCC
Confidence            456799999999999999999999999999998888865432221 1111 00              0125788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.+++.++++       ++|+|||+|+...    ..  ..+.....+++|+.|+.++++++.+.    .+.+++|++||.
T Consensus        70 d~~~~~~~~~-------~~d~vih~A~~~~----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~  132 (338)
T PLN00198         70 DEESFEAPIA-------GCDLVFHVATPVN----FA--SEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSA  132 (338)
T ss_pred             ChHHHHHHHh-------cCCEEEEeCCCCc----cC--CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecc
Confidence            9998877654       5899999998532    11  11234567899999999999987653    134689999986


Q ss_pred             CCCCC-----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          190 GSGGS-----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       190 ~~~~~-----------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .....                       ..+....|+.||.+.+.+++.++.++   |+++..++|+.|-.|.
T Consensus       133 ~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        133 AAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGPS  202 (338)
T ss_pred             eeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc---CceEEEEeCCceECCC
Confidence            32210                       01234579999999999998887653   7999999999987764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.73  E-value=1.5e-16  Score=152.78  Aligned_cols=174  Identities=14%  Similarity=0.140  Sum_probs=128.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ..|+||||||+|.||.+++++|+++|++|++++|+.++.......+..  ..             ...++.++.+|++|.
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~-------------~~~~~~~v~~Dl~d~   68 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL--PG-------------ATTRLTLWKADLAVE   68 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc--cC-------------CCCceEEEEecCCCh
Confidence            468999999999999999999999999999999987655433221110  00             113578899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +.++++++       .+|+|||+|+... .   ...  +..+..+++|+.|+.++++++.+..    ..++||++||...
T Consensus        69 ~~~~~~~~-------~~d~ViH~A~~~~-~---~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~----~~~r~v~~SS~~~  131 (351)
T PLN02650         69 GSFDDAIR-------GCTGVFHVATPMD-F---ESK--DPENEVIKPTVNGMLSIMKACAKAK----TVRRIVFTSSAGT  131 (351)
T ss_pred             hhHHHHHh-------CCCEEEEeCCCCC-C---CCC--CchhhhhhHHHHHHHHHHHHHHhcC----CceEEEEecchhh
Confidence            98887764       4899999998642 1   111  2236778999999999999886642    2358999988632


Q ss_pred             CCCC---CC------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          192 GGSS---TP------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       192 ~~~~---~~------------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ....   .+                  ....|+.||.+.+.+++.++++   +|++++.++|+.+-.|..
T Consensus       132 ~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        132 VNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFI  198 (351)
T ss_pred             cccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCC
Confidence            1110   00                  1237999999999999988776   479999999999988754

>PLN02240 UDP-glucose 4-epimerase

Probab=99.73  E-value=2.5e-16  Score=151.18  Aligned_cols=176  Identities=17%  Similarity=0.148  Sum_probs=125.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||+|+||.+++++|+++|++|++++|......+..+++......             .+.++.++.+|+
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~D~   67 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGD-------------LGDNLVFHKVDL   67 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcc-------------cCccceEEecCc
Confidence            4677899999999999999999999999999999987643332222222221000             123577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++..     ++|+|||+||... .    ..+.++..+.+++|+.++.++++++    ++. +.+++|++||
T Consensus        68 ~~~~~l~~~~~~~-----~~d~vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss  132 (352)
T PLN02240         68 RDKEALEKVFAST-----RFDAVIHFAGLKA-V----GESVAKPLLYYDNNLVGTINLLEVM----AKH-GCKKLVFSSS  132 (352)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEEccccCC-c----cccccCHHHHHHHHHHHHHHHHHHH----HHc-CCCEEEEEcc
Confidence            9999998887652     7999999999753 1    1233456789999999999998754    333 3468999988


Q ss_pred             CCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 017635          189 AGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM  234 (368)
Q Consensus       189 ~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~  234 (368)
                      ......          +......|+.||.+.+.+++.++.+.  .++.+..+.|+.
T Consensus       133 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~  186 (352)
T PLN02240        133 ATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFN  186 (352)
T ss_pred             HHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecC
Confidence            522111          11235689999999999999887552  356677766543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.72  E-value=5.3e-16  Score=151.02  Aligned_cols=174  Identities=20%  Similarity=0.246  Sum_probs=147.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++||+++||||+|.||.++++++++.+ .++++.+|++.++.+...++++.++               ..++.++-+|+
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~---------------~~~~~~~igdV  311 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFP---------------ELKLRFYIGDV  311 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCC---------------CcceEEEeccc
Confidence            4789999999999999999999999998 4799999999999999999887543               36789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      .|.+.++++++..     ++|+++|.|+.-.  -|+.+..   ..+.+.+|++|+.++++++...     +-.++|.+|+
T Consensus       312 rD~~~~~~~~~~~-----kvd~VfHAAA~KH--VPl~E~n---P~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iST  376 (588)
T COG1086         312 RDRDRVERAMEGH-----KVDIVFHAAALKH--VPLVEYN---PEEAIKTNVLGTENVAEAAIKN-----GVKKFVLIST  376 (588)
T ss_pred             ccHHHHHHHHhcC-----CCceEEEhhhhcc--CcchhcC---HHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEec
Confidence            9999999988754     7999999999754  4555544   4678999999999999998765     5678999986


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                      --    ...+...||+||...+.++.+++......+-++.+|+-|.|.-
T Consensus       377 DK----AV~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         377 DK----AVNPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             Cc----ccCCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence            52    2344579999999999999999987776678999999999864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.71  E-value=3.4e-16  Score=150.49  Aligned_cols=175  Identities=15%  Similarity=0.172  Sum_probs=124.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vi-l~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |++|||||+|+||.+++++|+++|++++ +.+|.... ... ..+....               ...++.++.+|++|.+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~---------------~~~~~~~~~~Dl~d~~   64 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVA---------------QSERFAFEKVDICDRA   64 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcc---------------cCCceEEEECCCcChH
Confidence            6899999999999999999999998755 44543221 110 1111100               1235778899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH---cC-CCCcEEEEEcC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR---DQ-PKGGHIFNMDG  188 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~---~~-~~~g~Iv~isS  188 (368)
                      +++++++.     .++|+|||+||...     .+.+.++++..+++|+.|+.++++++.+.|.   .. .+..++|++||
T Consensus        65 ~~~~~~~~-----~~~D~Vih~A~~~~-----~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS  134 (355)
T PRK10217         65 ELARVFTE-----HQPDCVMHLAAESH-----VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIST  134 (355)
T ss_pred             HHHHHHhh-----cCCCEEEECCcccC-----cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecc
Confidence            99888765     26999999999743     1234456789999999999999999987642   11 12358999988


Q ss_pred             CCCCC------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGG------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .....            .+..+...|+.||.+.+.+++.+++++   ++++..+.|+.+-.|
T Consensus       135 ~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp  193 (355)
T PRK10217        135 DEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGP  193 (355)
T ss_pred             hhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCC
Confidence            53211            012345689999999999999988775   577777888766544

>PLN02214 cinnamoyl-CoA reductase

Probab=99.71  E-value=7.1e-16  Score=147.71  Aligned_cols=167  Identities=19%  Similarity=0.175  Sum_probs=126.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT-VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++.... ..++..                 ...++.++.+|++
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   70 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-----------------GKERLILCKADLQ   70 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-----------------CCCcEEEEecCcC
Confidence            5678999999999999999999999999999999986643221 112110                 1135788899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.+++.++++       ++|+|||+|+...          ++.++.+++|+.|+.++++++...     +.++||++||.
T Consensus        71 d~~~~~~~~~-------~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~  128 (342)
T PLN02214         71 DYEALKAAID-------GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSI  128 (342)
T ss_pred             ChHHHHHHHh-------cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccc
Confidence            9998887765       5899999998632          134678999999999999887542     34689999985


Q ss_pred             CCCC-CC--CC-----------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          190 GSGG-SS--TP-----------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       190 ~~~~-~~--~~-----------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .+.+ .+  .+                 ....|+.||.+.+.+++.++.+.   |+++..++|+.|--|.
T Consensus       129 ~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        129 GAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPP  195 (342)
T ss_pred             eeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCC
Confidence            3221 11  00                 23479999999999998887664   7999999999987664

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.71  E-value=2.6e-16  Score=150.73  Aligned_cols=163  Identities=17%  Similarity=0.103  Sum_probs=115.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |++|||||+|+||.+++++|+++|++|++++|+.+... +...++.+...            ...+..+.++.+|++|.+
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Dl~d~~   68 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPH------------NVNKARMKLHYGDLTDSS   68 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccc------------cccccceeEEEeccCCHH
Confidence            68999999999999999999999999999999864211 11111111000            001245788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++.++++.+     ++|+|||+|+.... .    ...+.....+++|+.|+.++++++.+.-.+  +..++|++||....
T Consensus        69 ~l~~~~~~~-----~~d~ViH~Aa~~~~-~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~--~~~~~v~~SS~~vy  136 (343)
T TIGR01472        69 NLRRIIDEI-----KPTEIYNLAAQSHV-K----VSFEIPEYTADVDGIGTLRLLEAVRTLGLI--KSVKFYQASTSELY  136 (343)
T ss_pred             HHHHHHHhC-----CCCEEEECCccccc-c----hhhhChHHHHHHHHHHHHHHHHHHHHhCCC--cCeeEEEeccHHhh
Confidence            998888764     58999999997541 1    122234667889999999999988764111  12478899885221


Q ss_pred             CC----------CCCCchhhHHHHHHHHHHHHHHHHHh
Q 017635          193 GS----------STPLTAVYGSTKCGLRQLQASLFKES  220 (368)
Q Consensus       193 ~~----------~~~~~~~Y~aSKaal~~l~~~la~e~  220 (368)
                      ..          +..+...|++||.+.+.+++.+++++
T Consensus       137 g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       137 GKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             CCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            11          11245689999999999999998776

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.69  E-value=8.8e-16  Score=145.50  Aligned_cols=174  Identities=15%  Similarity=0.161  Sum_probs=125.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+++||||+|+||++++++|+++|++|++++|+....... ..+.....              ...++.++.+|++|+
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~--------------~~~~~~~~~~Dl~~~   67 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDG--------------AKERLHLFKANLLEE   67 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccC--------------CCCceEEEeccccCc
Confidence            468999999999999999999999999999999986543322 11111000              123678899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++       ++|+|||+|+... . ..  ..  .....+++|+.|+.++++++....    +..++|++||..+
T Consensus        68 ~~~~~~~~-------~~d~Vih~A~~~~-~-~~--~~--~~~~~~~~nv~gt~~ll~a~~~~~----~~~~~v~~SS~~~  130 (322)
T PLN02662         68 GSFDSVVD-------GCEGVFHTASPFY-H-DV--TD--PQAELIDPAVKGTLNVLRSCAKVP----SVKRVVVTSSMAA  130 (322)
T ss_pred             chHHHHHc-------CCCEEEEeCCccc-C-CC--CC--hHHHHHHHHHHHHHHHHHHHHhCC----CCCEEEEccCHHH
Confidence            88877764       5899999998643 1 11  11  225788999999999999875431    2458999998632


Q ss_pred             C-CCCC---------------CC-----chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          192 G-GSST---------------PL-----TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       192 ~-~~~~---------------~~-----~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      . ..+.               |.     ...|+.+|.+.+.+++.+.++.   |+++..++|+.+-.|..
T Consensus       131 ~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        131 VAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLL  197 (322)
T ss_pred             hcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCC
Confidence            1 1110               10     1479999999999888776553   79999999999988754

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.67  E-value=7.1e-16  Score=141.35  Aligned_cols=172  Identities=20%  Similarity=0.243  Sum_probs=124.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ||||||+|-||.+++++|++.+ .++++++|++.++-++..++....++..           ....+..+.+|++|.+.+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~-----------v~~~~~~vigDvrd~~~l   69 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPK-----------VRFEIVPVIGDVRDKERL   69 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TT-----------CEEEEE--CTSCCHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccC-----------cccccCceeecccCHHHH
Confidence            7999999999999999999998 5799999999999988888865432200           011345678999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .+++++.     ++|+++|.|+.-.  -++.+..   ..+.+++|++|+.++++++..+     +-.++|++|+--+   
T Consensus        70 ~~~~~~~-----~pdiVfHaAA~Kh--Vpl~E~~---p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKA---  131 (293)
T PF02719_consen   70 NRIFEEY-----KPDIVFHAAALKH--VPLMEDN---PFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKA---  131 (293)
T ss_dssp             HHHTT-------T-SEEEE--------HHHHCCC---HHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGC---
T ss_pred             HHHHhhc-----CCCEEEEChhcCC--CChHHhC---HHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEcccccc---
Confidence            9888654     7999999999754  3444444   4678999999999999998764     4678999987532   


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                       ..+...||+||...+.++.+.+....+.+.++.+|+-|.|.-
T Consensus       132 -v~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlg  173 (293)
T PF02719_consen  132 -VNPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLG  173 (293)
T ss_dssp             -SS--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETT
T ss_pred             -CCCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceec
Confidence             234579999999999999999988877789999999998864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.67  E-value=3.5e-15  Score=140.58  Aligned_cols=170  Identities=13%  Similarity=0.122  Sum_probs=123.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +++||||+|+||.+++++|+++|  ++|++.+|.... -.+..+.+.                  ...++.++.+|++|+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~~~   62 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLE------------------DNPRYRFVKGDIGDR   62 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhc------------------cCCCcEEEEcCCcCH
Confidence            48999999999999999999987  789888764321 111111111                  113577889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++.++++..     ++|+|||+|+....     +.+.++.+..+++|+.++..+++++.+.+    ...++|++||...
T Consensus        63 ~~~~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~i~~Ss~~v  128 (317)
T TIGR01181        63 ELVSRLFTEH-----QPDAVVHFAAESHV-----DRSISGPAAFIETNVVGTYTLLEAVRKYW----HEFRFHHISTDEV  128 (317)
T ss_pred             HHHHHHHhhc-----CCCEEEEcccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHhcC----CCceEEEeeccce
Confidence            9998887653     59999999997531     23345667889999999999988776543    2347999987522


Q ss_pred             CCC-----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          192 GGS-----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       192 ~~~-----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ...           +......|+.+|.+.+.+++.++.+.   ++++..++|+.+-.+.
T Consensus       129 ~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       129 YGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPY  184 (317)
T ss_pred             eCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence            111           11233579999999999999887765   6899999999876553

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.65  E-value=6e-15  Score=141.65  Aligned_cols=182  Identities=15%  Similarity=0.117  Sum_probs=128.2

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .....+++|+|+||||+|.||..++++|+++|++|++++|..........++......            ....++.++.
T Consensus         8 ~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~   75 (348)
T PRK15181          8 RTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSE------------EQWSRFIFIQ   75 (348)
T ss_pred             hhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhcccc------------ccCCceEEEE
Confidence            3345667899999999999999999999999999999998654322222222110000            0113578899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|+.|.+++.++++       .+|+|||.|+....  +   .+.++....+++|+.|+.++++.+..    . +..++|+
T Consensus        76 ~Di~d~~~l~~~~~-------~~d~ViHlAa~~~~--~---~~~~~~~~~~~~Nv~gt~nll~~~~~----~-~~~~~v~  138 (348)
T PRK15181         76 GDIRKFTDCQKACK-------NVDYVLHQAALGSV--P---RSLKDPIATNSANIDGFLNMLTAARD----A-HVSSFTY  138 (348)
T ss_pred             ccCCCHHHHHHHhh-------CCCEEEECccccCc--h---hhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEE
Confidence            99999888776664       48999999997431  1   12233456799999999999887643    2 3458999


Q ss_pred             EcCCCCCCCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          186 MDGAGSGGSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       186 isS~~~~~~~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      +||.......          ..+...|+.||.+.+.+++.++.+.   |+++..+.|+.+-.|.
T Consensus       139 ~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        139 AASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             eechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcC
Confidence            9876322111          1123579999999999988876553   7999999999886653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.65  E-value=9.9e-15  Score=139.29  Aligned_cols=169  Identities=18%  Similarity=0.168  Sum_probs=118.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+|+||++++++|+++|++|++++|...........+...                .+.++.++.+|++|.+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~~~~   65 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALL   65 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh----------------cCCCceEEEccCCCHHHH
Confidence            6999999999999999999999999999887533322222222210                123567789999999998


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .++++.     .++|+|||+||... ...    ..+.....+++|+.++.++++++    ++. +.+++|++||......
T Consensus        66 ~~~~~~-----~~~d~vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~v~~Ss~~~yg~  130 (338)
T PRK10675         66 TEILHD-----HAIDTVIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAM----RAA-NVKNLIFSSSATVYGD  130 (338)
T ss_pred             HHHHhc-----CCCCEEEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHH----HHc-CCCEEEEeccHHhhCC
Confidence            887753     36999999999754 111    22334567899999999987754    333 3568999988632110


Q ss_pred             C----------C-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          195 S----------T-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       195 ~----------~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                      .          . .....|+.+|.+.+.+++.++++..  ++++..++|+.+-
T Consensus       131 ~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~  181 (338)
T PRK10675        131 QPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPV  181 (338)
T ss_pred             CCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeec
Confidence            0          0 2357899999999999999876543  4667777765443

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.64  E-value=2.9e-14  Score=131.97  Aligned_cols=214  Identities=14%  Similarity=0.150  Sum_probs=148.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH--HHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM--TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|+||||||.||..++++|+++||.|..+.|++++.+.  .+.+++.                 ...+...+..|+.
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~-----------------a~~~l~l~~aDL~   67 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEG-----------------AKERLKLFKADLL   67 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhccc-----------------CcccceEEecccc
Confidence            67899999999999999999999999999999999887443  2344332                 2345888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++       +.|+|+|.|.... +.   ..+  .-.+.++..+.|+.++.+++...    +.-.|||+.||.
T Consensus        68 d~~sf~~ai~-------gcdgVfH~Asp~~-~~---~~~--~e~~li~pav~Gt~nVL~ac~~~----~sVkrvV~TSS~  130 (327)
T KOG1502|consen   68 DEGSFDKAID-------GCDGVFHTASPVD-FD---LED--PEKELIDPAVKGTKNVLEACKKT----KSVKRVVYTSST  130 (327)
T ss_pred             ccchHHHHHh-------CCCEEEEeCccCC-CC---CCC--cHHhhhhHHHHHHHHHHHHHhcc----CCcceEEEeccH
Confidence            9999999887       5899999998654 11   111  12378999999999998887543    235789999987


Q ss_pred             CCCCCCCCC-----------c----------hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch
Q 017635          190 GSGGSSTPL-----------T----------AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN  248 (368)
Q Consensus       190 ~~~~~~~~~-----------~----------~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~  248 (368)
                      ++.....+.           +          ..|+.||.-.+.-+-.++.|   .|+...+|+||.|--|..........
T Consensus       131 aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~  207 (327)
T KOG1502|consen  131 AAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSL  207 (327)
T ss_pred             HHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhH
Confidence            443322111           1          25777776655555544444   37999999999998887765221111


Q ss_pred             hhhhhh-------------hcCCHHHHHHHhhhhhhhcccccceeeeccC
Q 017635          249 KQMFNI-------------ICELPETVARTLVPRIRVVKGSGKAINYLTP  285 (368)
Q Consensus       249 ~~~~~~-------------~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~  285 (368)
                      .....+             .....+++|+.-+..+..++..   .+|++.
T Consensus       208 ~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~a~---GRyic~  254 (327)
T KOG1502|consen  208 NALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPSAK---GRYICV  254 (327)
T ss_pred             HHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcccC---ceEEEe
Confidence            111111             1135788888888777666544   345544

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.63  E-value=1.2e-14  Score=139.54  Aligned_cols=172  Identities=12%  Similarity=0.165  Sum_probs=120.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDR-VVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +++||||+|+||.+++++|+++|++ |+.+++..  ...+.. ..+.                  .+.++.++.+|++|.
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl~d~   62 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESL-ADVS------------------DSERYVFEHADICDR   62 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHH-Hhcc------------------cCCceEEEEecCCCH
Confidence            5899999999999999999999976 54455432  111111 1110                  123577889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----CCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----PKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~~~g~Iv~is  187 (368)
                      +++++++++.     ++|+|||+||.... .    .+.+..+..+++|+.|+.++++++.++|.+.    ++..++|++|
T Consensus        63 ~~~~~~~~~~-----~~d~vih~A~~~~~-~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~S  132 (352)
T PRK10084         63 AELDRIFAQH-----QPDAVMHLAAESHV-D----RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHIS  132 (352)
T ss_pred             HHHHHHHHhc-----CCCEEEECCcccCC-c----chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEec
Confidence            9999888652     69999999997431 1    1122346789999999999999998876432    1234799998


Q ss_pred             CCCCCCC--------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          188 GAGSGGS--------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       188 S~~~~~~--------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      |......                    +..+...|+.||.+.+.+++.+++++   |+++..+.|+.|-.|
T Consensus       133 S~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp  200 (352)
T PRK10084        133 TDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGP  200 (352)
T ss_pred             chhhcCCCCccccccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCC
Confidence            8522111                    11234689999999999999988775   566666777665443

>PLN02686 cinnamoyl-CoA reductase

Probab=99.62  E-value=2.7e-14  Score=138.08  Aligned_cols=181  Identities=14%  Similarity=0.094  Sum_probs=125.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+.++|+|+||||+|+||.+++++|+++|++|+++.|+.++.+.+ +++... ..          .......+.++.+|+
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~-~~----------~~~~~~~~~~v~~Dl  116 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMF-GE----------MGRSNDGIWTVMANL  116 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhh-cc----------ccccCCceEEEEcCC
Confidence            356789999999999999999999999999999989987655433 222110 00          000012477899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+++.++++       .+|.+||.|+...+ ......    .....++|+.++.++++++...    .+-.++|++||
T Consensus       117 ~d~~~l~~~i~-------~~d~V~hlA~~~~~-~~~~~~----~~~~~~~nv~gt~~llea~~~~----~~v~r~V~~SS  180 (367)
T PLN02686        117 TEPESLHEAFD-------GCAGVFHTSAFVDP-AGLSGY----TKSMAELEAKASENVIEACVRT----ESVRKCVFTSS  180 (367)
T ss_pred             CCHHHHHHHHH-------hccEEEecCeeecc-cccccc----cchhhhhhHHHHHHHHHHHHhc----CCccEEEEecc
Confidence            99999888775       36899999887532 111111    1234577888888887775431    12458999988


Q ss_pred             CCCCC------CC----------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGG------SS----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~------~~----------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ..+..      ..                ......|+.||.+.+.+++.++.+   +|+++++++|+.|..|..
T Consensus       181 ~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~  251 (367)
T PLN02686        181 LLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGF  251 (367)
T ss_pred             HHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCC
Confidence            52110      00                002246999999999999888765   489999999999988853

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.61  E-value=2.3e-14  Score=135.55  Aligned_cols=169  Identities=18%  Similarity=0.126  Sum_probs=121.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|+||.+++++|+++|++|++.+|......+...++..                  ..++..+.+|+++.+++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~   62 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER------------------ITRVTFVEGDLRDRELL   62 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc------------------ccceEEEECCCCCHHHH
Confidence            479999999999999999999999999887643322221111110                  01577789999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++.     +++|++|||||.... .    .+.++..+.+++|+.++..+++++..    . +.+++|++||......
T Consensus        63 ~~~~~~-----~~~d~vv~~ag~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~ss~~~~g~  127 (328)
T TIGR01179        63 DRLFEE-----HKIDAVIHFAGLIAV-G----ESVQDPLKYYRNNVVNTLNLLEAMQQ----T-GVKKFIFSSSAAVYGE  127 (328)
T ss_pred             HHHHHh-----CCCcEEEECccccCc-c----hhhcCchhhhhhhHHHHHHHHHHHHh----c-CCCEEEEecchhhcCC
Confidence            888763     479999999997541 1    12234567789999999999876532    3 3468999887522111


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 ----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                                +......|+.+|++.+.+++.++.+.  .++++..+.|+.+-.+
T Consensus       128 ~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~  179 (328)
T TIGR01179       128 PSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA  179 (328)
T ss_pred             CCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence                      01134679999999999999987652  3689999999877654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.61  E-value=1.7e-14  Score=136.82  Aligned_cols=160  Identities=21%  Similarity=0.247  Sum_probs=120.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++++||||+|+||..++++|+++|++|++++|+.++...    +                   ....+.++.+|++|.++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~-------------------~~~~~~~~~~D~~~~~~   57 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----L-------------------EGLDVEIVEGDLRDPAS   57 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----c-------------------ccCCceEEEeeCCCHHH
Confidence            369999999999999999999999999999998654321    1                   11257789999999998


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       .+|++||+|+...   .    ..++.+..+++|+.++.++++++...     +.+++|++||.....
T Consensus        58 l~~~~~-------~~d~vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~  118 (328)
T TIGR03466        58 LRKAVA-------GCRALFHVAADYR---L----WAPDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLG  118 (328)
T ss_pred             HHHHHh-------CCCEEEEeceecc---c----CCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcC
Confidence            887764       5899999998532   1    11235678899999999998876542     356899998863221


Q ss_pred             C-CC--------C-----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          194 S-ST--------P-----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       194 ~-~~--------~-----~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      . ..        +     ....|+.+|.+.+.+++.++.+   .|+++..++|+.+-.+
T Consensus       119 ~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~  174 (328)
T TIGR03466       119 VRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGP  174 (328)
T ss_pred             cCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCC
Confidence            1 00        0     1347999999999999988765   3789999999887554

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.56  E-value=1.1e-13  Score=124.57  Aligned_cols=170  Identities=14%  Similarity=0.149  Sum_probs=126.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|||||.|.||.++++.+.++.  .+|+.++.-. ..-.+..+.+.                  ...+..+++.|++|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~------------------~~~~~~fv~~DI~D   62 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE------------------DSPRYRFVQGDICD   62 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh------------------cCCCceEEeccccC
Confidence            478999999999999999999876  4577776521 11111112222                  23588999999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+.+.+++++-     ++|+++|-|+-..     .+-+.++.+..+++|++|++.+++++..+..+    -+++.||.-.
T Consensus        63 ~~~v~~~~~~~-----~~D~VvhfAAESH-----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDE  128 (340)
T COG1088          63 RELVDRLFKEY-----QPDAVVHFAAESH-----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDE  128 (340)
T ss_pred             HHHHHHHHHhc-----CCCeEEEechhcc-----ccccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEecccc
Confidence            99999888754     7999999998655     35566677889999999999999998876532    3678887521


Q ss_pred             C------------CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          191 S------------GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       191 ~------------~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .            ...+..+.++|+||||+.+.|++++.+.+   |+.+....+..---|
T Consensus       129 VYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGP  185 (340)
T COG1088         129 VYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGP  185 (340)
T ss_pred             ccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCC
Confidence            1            11234567899999999999999999887   688888887655444

>PLN02427 UDP-apiose/xylose synthase

Probab=99.56  E-value=1e-13  Score=135.02  Aligned_cols=173  Identities=10%  Similarity=0.107  Sum_probs=120.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +.++++|+||||+|.||..++++|+++ |++|++++|+.++..........                ....++.++.+|+
T Consensus        11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~----------------~~~~~~~~~~~Dl   74 (386)
T PLN02427         11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTV----------------PWSGRIQFHRINI   74 (386)
T ss_pred             cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccc----------------cCCCCeEEEEcCC
Confidence            456678999999999999999999998 59999999876543321110000                0113588999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++       .+|+|||+|+...+ ....    ++-.+.+..|+.+..++++++..    .  +.++|++||
T Consensus        75 ~d~~~l~~~~~-------~~d~ViHlAa~~~~-~~~~----~~~~~~~~~n~~gt~~ll~aa~~----~--~~r~v~~SS  136 (386)
T PLN02427         75 KHDSRLEGLIK-------MADLTINLAAICTP-ADYN----TRPLDTIYSNFIDALPVVKYCSE----N--NKRLIHFST  136 (386)
T ss_pred             CChHHHHHHhh-------cCCEEEEcccccCh-hhhh----hChHHHHHHHHHHHHHHHHHHHh----c--CCEEEEEee
Confidence            99998877664       47999999997541 1111    11234466899999988877632    2  258999988


Q ss_pred             CCCCCCC--------CC------------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          189 AGSGGSS--------TP------------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       189 ~~~~~~~--------~~------------------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                      .......        .|                        ....|+.||.+.+.+++.+++.   .|+++..++|+.|-
T Consensus       137 ~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vy  213 (386)
T PLN02427        137 CEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWI  213 (386)
T ss_pred             eeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEeccccee
Confidence            5321100        00                        1236999999999998876543   47999999998887


Q ss_pred             Ccc
Q 017635          237 TDL  239 (368)
Q Consensus       237 T~~  239 (368)
                      .|.
T Consensus       214 Gp~  216 (386)
T PLN02427        214 GPR  216 (386)
T ss_pred             CCC
Confidence            653

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.54  E-value=2.2e-13  Score=130.74  Aligned_cols=174  Identities=20%  Similarity=0.275  Sum_probs=115.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+||||+|+||++++++|+++|  ++|+++.|+.+... ..+.+.+.......     ........++.++.+|++++.
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~-~~~~l~~~~~~~~~-----~~~~~~~~~v~~~~~D~~~~~   74 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEH-AMERLREALRSYRL-----WQEDLARERIEVVAGDLSEPR   74 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHH-HHHHHHHHHHHhCC-----CCchhhhCCEEEEeCCcCccc
Confidence            58999999999999999999999  78999999865321 11222211110000     000000146889999998652


Q ss_pred             ------HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          113 ------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       113 ------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                            ....+.       ..+|++||||+.... .       ..++..+++|+.++..+++.+..    . +..+++++
T Consensus        75 ~gl~~~~~~~~~-------~~~d~vih~a~~~~~-~-------~~~~~~~~~nv~g~~~ll~~a~~----~-~~~~~v~i  134 (367)
T TIGR01746        75 LGLSDAEWERLA-------ENVDTIVHNGALVNW-V-------YPYSELRAANVLGTREVLRLAAS----G-RAKPLHYV  134 (367)
T ss_pred             CCcCHHHHHHHH-------hhCCEEEeCCcEecc-C-------CcHHHHhhhhhHHHHHHHHHHhh----C-CCceEEEE
Confidence                  332222       369999999997541 1       12466788999999998887643    2 34569999


Q ss_pred             cCCCCCCCC---------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          187 DGAGSGGSS---------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       187 sS~~~~~~~---------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ||.......               ......|+.||.+.+.+++.++.    .|++++.++||.+..+
T Consensus       135 SS~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       135 STISVLAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN  197 (367)
T ss_pred             ccccccCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence            887432210               01134799999999998876543    3899999999999875

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.53  E-value=3.9e-13  Score=121.66  Aligned_cols=151  Identities=17%  Similarity=0.173  Sum_probs=116.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++||||||.|-||.+++++|++.|++|++.+.-.....+.+..                      ....+++.|+.|.+-
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~----------------------~~~~f~~gDi~D~~~   58 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK----------------------LQFKFYEGDLLDRAL   58 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh----------------------ccCceEEeccccHHH
Confidence            3799999999999999999999999999998754433322221                      115789999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +++++++.     +||.|||.||...     ...+.++..+.++.|+.|++.|++++..    . +-..+||.||.+...
T Consensus        59 L~~vf~~~-----~idaViHFAa~~~-----VgESv~~Pl~Yy~NNv~gTl~Ll~am~~----~-gv~~~vFSStAavYG  123 (329)
T COG1087          59 LTAVFEEN-----KIDAVVHFAASIS-----VGESVQNPLKYYDNNVVGTLNLIEAMLQ----T-GVKKFIFSSTAAVYG  123 (329)
T ss_pred             HHHHHHhc-----CCCEEEECccccc-----cchhhhCHHHHHhhchHhHHHHHHHHHH----h-CCCEEEEecchhhcC
Confidence            99988764     8999999999754     2346677889999999999999776544    3 466788877753322


Q ss_pred             CC----------CCCchhhHHHHHHHHHHHHHHHHHhC
Q 017635          194 SS----------TPLTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       194 ~~----------~~~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      .+          ......|+.||...+.+.+.+++...
T Consensus       124 ~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         124 EPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             CCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhCC
Confidence            21          12346899999999999999987653

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.52  E-value=8e-13  Score=119.20  Aligned_cols=164  Identities=26%  Similarity=0.278  Sum_probs=127.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |+||||+|-||.+++++|+++|+.|+...|+.........+                      .++.++.+|+.|.++++
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----------------------~~~~~~~~dl~~~~~~~   58 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----------------------LNVEFVIGDLTDKEQLE   58 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----------------------TTEEEEESETTSHHHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----------------------ceEEEEEeecccccccc
Confidence            79999999999999999999999999888876543221111                      26788999999999999


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  195 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  195 (368)
                      ++++..     .+|.+||+|+...     ...+.+.....++.|+.++.++++.+...     +..++|++||.......
T Consensus        59 ~~~~~~-----~~d~vi~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~  123 (236)
T PF01370_consen   59 KLLEKA-----NIDVVIHLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDP  123 (236)
T ss_dssp             HHHHHH-----TESEEEEEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSS
T ss_pred             cccccc-----CceEEEEeecccc-----ccccccccccccccccccccccccccccc-----ccccccccccccccccc
Confidence            998876     7999999998742     11223556788889999988888777543     34689999886332222


Q ss_pred             C----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          196 T----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       196 ~----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .          .....|+.+|...+.+.+.+.+..   ++++..++|+.+-.+.
T Consensus       124 ~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  124 DGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG  174 (236)
T ss_dssp             SSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccccccccccccccccc---cccccccccccccccc
Confidence            1          133569999999999999988776   7999999999987776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.50  E-value=3.8e-13  Score=125.10  Aligned_cols=165  Identities=16%  Similarity=0.152  Sum_probs=120.5

Q ss_pred             EEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           37 VITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        37 lITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      |||||+|.||.+++++|+++|  ++|.+.+++......  ..+..                  .....++.+|++|.+++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~------------------~~~~~~~~~Di~d~~~l   60 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQK------------------SGVKEYIQGDITDPESL   60 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhc------------------ccceeEEEeccccHHHH
Confidence            699999999999999999999  788888887653221  11111                  12233899999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .++++       ..|+|||.|+.... .     .....+..+++|+.|+-++++++...     +-.++|++||..+...
T Consensus        61 ~~a~~-------g~d~V~H~Aa~~~~-~-----~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~  122 (280)
T PF01073_consen   61 EEALE-------GVDVVFHTAAPVPP-W-----GDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFD  122 (280)
T ss_pred             HHHhc-------CCceEEEeCccccc-c-----CcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEe
Confidence            98876       57999999997542 1     13346789999999999999887642     4678999998743222


Q ss_pred             ---CC-------------CCchhhHHHHHHHHHHHHHHHH-HhC-CCCeEEEEEecCcccCcc
Q 017635          195 ---ST-------------PLTAVYGSTKCGLRQLQASLFK-ESK-RSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       195 ---~~-------------~~~~~Y~aSKaal~~l~~~la~-e~~-~~gI~v~~v~PG~v~T~~  239 (368)
                         +.             .....|+.||+..+.++..... ++. ...++..+|+|..|--|.
T Consensus       123 ~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~  185 (280)
T PF01073_consen  123 NYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPG  185 (280)
T ss_pred             ccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcc
Confidence               11             1234799999999998876554 222 124899999998886654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.50  E-value=8.8e-13  Score=127.64  Aligned_cols=174  Identities=15%  Similarity=0.085  Sum_probs=123.2

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +.-++.+.-++|+|+||||+|.||.+++++|.++|++|++++|.....      +..                 ......
T Consensus        11 ~~~~~~~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~-----------------~~~~~~   67 (370)
T PLN02695         11 LEREPYWPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSE-----------------DMFCHE   67 (370)
T ss_pred             cCCCCCCCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------ccc-----------------ccccce
Confidence            344555666789999999999999999999999999999999864321      000                 001245


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      ++.+|++|.+++.++++       ++|+|||+|+...+ .....   .+....+..|+.++.++++++..    . +..+
T Consensus        68 ~~~~Dl~d~~~~~~~~~-------~~D~Vih~Aa~~~~-~~~~~---~~~~~~~~~N~~~t~nll~aa~~----~-~vk~  131 (370)
T PLN02695         68 FHLVDLRVMENCLKVTK-------GVDHVFNLAADMGG-MGFIQ---SNHSVIMYNNTMISFNMLEAARI----N-GVKR  131 (370)
T ss_pred             EEECCCCCHHHHHHHHh-------CCCEEEEcccccCC-ccccc---cCchhhHHHHHHHHHHHHHHHHH----h-CCCE
Confidence            68899999887766553       58999999986431 11111   12234567899999999887643    2 3468


Q ss_pred             EEEEcCCCCCCC----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          183 IFNMDGAGSGGS----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       183 Iv~isS~~~~~~----------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      +|++||......                +..+...|+.+|.+.+.+++.++..+   |+++..+.|+.+-.|
T Consensus       132 ~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp  200 (370)
T PLN02695        132 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGP  200 (370)
T ss_pred             EEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCC
Confidence            999988522110                12234589999999999998876653   799999999888766

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.50  E-value=1.6e-12  Score=119.65  Aligned_cols=187  Identities=17%  Similarity=0.181  Sum_probs=151.1

Q ss_pred             CCeEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGa-s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ..+|||.|. +.-|++.+|..|-++|+-|+++..+.++.+...++                    ....+.....|..++
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e--------------------~~~dI~~L~ld~~~~   62 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESE--------------------DRPDIRPLWLDDSDP   62 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhc--------------------cCCCCCCcccCCCCC
Confidence            468999996 79999999999999999999999998765543332                    124577788888887


Q ss_pred             HHHHHHHHHHHhHcC--------------CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635          112 ADVQKLSNFAVNEFG--------------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g--------------~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      .++...+.++.+.+.              ++..+|.......+.+|++.++.+.|.+.++.|++-++.+++.++|+|+.+
T Consensus        63 ~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~  142 (299)
T PF08643_consen   63 SSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSR  142 (299)
T ss_pred             cchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            777777776665443              345566666555567899999999999999999999999999999999973


Q ss_pred             C-CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          178 P-KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       178 ~-~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      . ++.+||.+..+.......|..+.-.....++.+|+++|++|+.+.||.|..++-|.++-..
T Consensus       143 ~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~  205 (299)
T PF08643_consen  143 SNQKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGN  205 (299)
T ss_pred             cCCCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeecccc
Confidence            2 3566666664335667788889999999999999999999999999999999999988663

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.50  E-value=5.3e-13  Score=129.97  Aligned_cols=163  Identities=12%  Similarity=0.117  Sum_probs=116.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH--HHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM--TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++++||||+|+||++++++|+++|++|++++|+..+.+.  ...++..                 ....+.++.+|+
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-----------------~~~~v~~v~~Dl  120 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-----------------ELPGAEVVFGDV  120 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-----------------hcCCceEEEeeC
Confidence            457899999999999999999999999999999998765421  1111111                 113578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++..   .+++|+||||+|...  ..    .    ...+++|+.+..++++++.    +. +.+++|++||
T Consensus       121 ~d~~~l~~~~~~~---~~~~D~Vi~~aa~~~--~~----~----~~~~~vn~~~~~~ll~aa~----~~-gv~r~V~iSS  182 (390)
T PLN02657        121 TDADSLRKVLFSE---GDPVDVVVSCLASRT--GG----V----KDSWKIDYQATKNSLDAGR----EV-GAKHFVLLSA  182 (390)
T ss_pred             CCHHHHHHHHHHh---CCCCcEEEECCccCC--CC----C----ccchhhHHHHHHHHHHHHH----Hc-CCCEEEEEee
Confidence            9999999887643   126999999998532  11    0    1235678888877777653    33 4578999988


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                      .. ..   .....|..+|...+...+.     ...|++...++|+.+-.
T Consensus       183 ~~-v~---~p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        183 IC-VQ---KPLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFK  222 (390)
T ss_pred             cc-cc---CcchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhc
Confidence            63 22   2345688899888776543     23589999999987653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.48  E-value=1.4e-12  Score=135.84  Aligned_cols=172  Identities=16%  Similarity=0.153  Sum_probs=121.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .++|+||||||+|.||++++++|+++  |++|++.+|..  +...    .+....               ...++.++.+
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~----~l~~~~---------------~~~~v~~~~~   64 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLK----NLNPSK---------------SSPNFKFVKG   64 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhh----hhhhcc---------------cCCCeEEEEC
Confidence            46789999999999999999999998  68899888753  1111    111100               1246888999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.+.+++++..     .++|+|||+|+....     +...++....+++|+.|+.++++++..    .+...++|++
T Consensus        65 Dl~d~~~~~~~~~~-----~~~D~ViHlAa~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~  130 (668)
T PLN02260         65 DIASADLVNYLLIT-----EGIDTIMHFAAQTHV-----DNSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHV  130 (668)
T ss_pred             CCCChHHHHHHHhh-----cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEE
Confidence            99999887765432     369999999997541     112223456789999999999877643    2224689999


Q ss_pred             cCCCCCCC-------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          187 DGAGSGGS-------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       187 sS~~~~~~-------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ||......             +......|+.+|.+.+.+++.+.++.   ++.+..++|+.|--+
T Consensus       131 SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp  192 (668)
T PLN02260        131 STDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGP  192 (668)
T ss_pred             cchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCc
Confidence            98532111             11124579999999999998877654   688999999877654

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.47  E-value=6.2e-13  Score=125.33  Aligned_cols=160  Identities=12%  Similarity=0.146  Sum_probs=109.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |+||||+|.||.+++++|+++|++++++.|+....... .                          ....+|+.|..+.+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~--------------------------~~~~~~~~d~~~~~   54 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V--------------------------NLVDLDIADYMDKE   54 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H--------------------------hhhhhhhhhhhhHH
Confidence            79999999999999999999999777666654321110 0                          11245777766666


Q ss_pred             HHHHHHHh--HcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          116 KLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       116 ~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      .+++.+.+  .++++|+|||+||.... .   ..+.   +..+++|+.++.++++++..    .  +.++|++||.....
T Consensus        55 ~~~~~~~~~~~~~~~d~Vih~A~~~~~-~---~~~~---~~~~~~n~~~t~~ll~~~~~----~--~~~~i~~SS~~vyg  121 (308)
T PRK11150         55 DFLAQIMAGDDFGDIEAIFHEGACSST-T---EWDG---KYMMDNNYQYSKELLHYCLE----R--EIPFLYASSAATYG  121 (308)
T ss_pred             HHHHHHhcccccCCccEEEECceecCC-c---CCCh---HHHHHHHHHHHHHHHHHHHH----c--CCcEEEEcchHHhC
Confidence            66555442  34579999999986431 1   1222   34689999999999887643    2  23689998863211


Q ss_pred             CC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          194 SS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       194 ~~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ..          ..+...|+.||.+.+.+.+.++.+   .++++..++|+.+-.+
T Consensus       122 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~  173 (308)
T PRK11150        122 GRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGP  173 (308)
T ss_pred             cCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCC
Confidence            11          123457999999999998877654   3688899999877654

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.46  E-value=2.1e-12  Score=123.95  Aligned_cols=162  Identities=12%  Similarity=0.106  Sum_probs=114.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC-CH
Q 017635           34 RNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-EP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~-~~  111 (368)
                      ++|+||||+|.||.+++++|+++ |++|++++|+.++..    ++.                  ....+.++.+|++ +.
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~------------------~~~~~~~~~~Dl~~~~   59 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV------------------NHPRMHFFEGDITINK   59 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc------------------cCCCeEEEeCCCCCCH
Confidence            47999999999999999999986 699999998764322    111                  1135788999998 66


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +.+.++++       ++|+|||+|+...+ ..    ..++.+..+++|+.+..++++++..    . + .++|++||...
T Consensus        60 ~~~~~~~~-------~~d~ViH~aa~~~~-~~----~~~~p~~~~~~n~~~~~~ll~aa~~----~-~-~~~v~~SS~~v  121 (347)
T PRK11908         60 EWIEYHVK-------KCDVILPLVAIATP-AT----YVKQPLRVFELDFEANLPIVRSAVK----Y-G-KHLVFPSTSEV  121 (347)
T ss_pred             HHHHHHHc-------CCCEEEECcccCCh-HH----hhcCcHHHHHHHHHHHHHHHHHHHh----c-C-CeEEEEeccee
Confidence            66655433       58999999997532 11    1223456789999999988777642    2 2 58999988632


Q ss_pred             CCCC---------C--------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          192 GGSS---------T--------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       192 ~~~~---------~--------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ....         .        .....|+.||.+.+.+.+.++.+   .|+.+..+.|+.+-.|
T Consensus       122 yg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp  182 (347)
T PRK11908        122 YGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGP  182 (347)
T ss_pred             eccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCC
Confidence            1100         0        11236999999999999887754   3678888888776554

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.45  E-value=1.8e-12  Score=118.58  Aligned_cols=160  Identities=18%  Similarity=0.156  Sum_probs=122.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++||||||.|-||.+++.+|+++|+.|++++.-........+.+++...              .+..+.+++.|++|.+
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~--------------~~~~v~f~~~Dl~D~~   67 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLG--------------EGKSVFFVEGDLNDAE   67 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcC--------------CCCceEEEEeccCCHH
Confidence            58999999999999999999999999999997644333344444443321              2368999999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      .+++++++.     ++|.|+|-|+....     ..+.+......+.|+.|+++++..    |++.+ -..+|+.||+...
T Consensus        68 ~L~kvF~~~-----~fd~V~Hfa~~~~v-----geS~~~p~~Y~~nNi~gtlnlLe~----~~~~~-~~~~V~sssatvY  132 (343)
T KOG1371|consen   68 ALEKLFSEV-----KFDAVMHFAALAAV-----GESMENPLSYYHNNIAGTLNLLEV----MKAHN-VKALVFSSSATVY  132 (343)
T ss_pred             HHHHHHhhc-----CCceEEeehhhhcc-----chhhhCchhheehhhhhHHHHHHH----HHHcC-CceEEEecceeee
Confidence            999999876     69999999997551     234455588899999999999554    55553 6789998886432


Q ss_pred             CCC----------CC-CchhhHHHHHHHHHHHHHHHHHhC
Q 017635          193 GSS----------TP-LTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       193 ~~~----------~~-~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      ..+          .. +...|+.+|.+++...+.+..-+.
T Consensus       133 G~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  133 GLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             cCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            222          12 457899999999999998887654

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.45  E-value=1.6e-12  Score=134.87  Aligned_cols=164  Identities=12%  Similarity=0.080  Sum_probs=117.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++++|+||||+|.||.+++++|+++ |++|+.++|+......    +.                  ...++.++.+|++|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~------------------~~~~~~~~~gDl~d  371 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL------------------GHPRFHFVEGDISI  371 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc------------------CCCceEEEeccccC
Confidence            4789999999999999999999986 7999999997643221    10                  11357888999998


Q ss_pred             HHH-HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          111 PAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       111 ~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      .++ ++++++       ++|+|||+|+...+ ..    ..++.+..+++|+.++.++.+++..    . + .++|++||.
T Consensus       372 ~~~~l~~~l~-------~~D~ViHlAa~~~~-~~----~~~~~~~~~~~Nv~~t~~ll~a~~~----~-~-~~~V~~SS~  433 (660)
T PRK08125        372 HSEWIEYHIK-------KCDVVLPLVAIATP-IE----YTRNPLRVFELDFEENLKIIRYCVK----Y-N-KRIIFPSTS  433 (660)
T ss_pred             cHHHHHHHhc-------CCCEEEECccccCc-hh----hccCHHHHHHhhHHHHHHHHHHHHh----c-C-CeEEEEcch
Confidence            654 343332       58999999997542 11    1122345789999999999888753    2 2 579999885


Q ss_pred             CCCCC----CC----------C---CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          190 GSGGS----ST----------P---LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       190 ~~~~~----~~----------~---~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .....    +.          |   ....|+.||.+.+.+++.+++++   |+++..+.|+.+--|
T Consensus       434 ~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp  496 (660)
T PRK08125        434 EVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGP  496 (660)
T ss_pred             hhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCC
Confidence            32111    00          1   12369999999999998877654   689999999988655

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.42  E-value=4e-12  Score=119.85  Aligned_cols=162  Identities=17%  Similarity=0.115  Sum_probs=111.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ||||||+|.||.+++++|.++|+ +|++++|..... . ..++                      ....+..|+.+.+.+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~-~~~~----------------------~~~~~~~d~~~~~~~   56 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K-FLNL----------------------ADLVIADYIDKEDFL   56 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h-hhhh----------------------hheeeeccCcchhHH
Confidence            68999999999999999999997 688887754321 1 1111                      012456788887777


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +.+.+.   .+.++|++||+|+...       .+.++.+..+++|+.++.++++++..    .  +.++|++||......
T Consensus        57 ~~~~~~---~~~~~D~vvh~A~~~~-------~~~~~~~~~~~~n~~~~~~ll~~~~~----~--~~~~v~~SS~~vy~~  120 (314)
T TIGR02197        57 DRLEKG---AFGKIEAIFHQGACSD-------TTETDGEYMMENNYQYSKRLLDWCAE----K--GIPFIYASSAATYGD  120 (314)
T ss_pred             HHHHhh---ccCCCCEEEECccccC-------ccccchHHHHHHHHHHHHHHHHHHHH----h--CCcEEEEccHHhcCC
Confidence            665542   3467999999999643       12234577889999999999887654    2  247999988632110


Q ss_pred             C----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 S----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .          ......|+.||.+.+.+++....+. ..++++..+.|+.+--+
T Consensus       121 ~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~  173 (314)
T TIGR02197       121 GEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGP  173 (314)
T ss_pred             CCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCC
Confidence            0          1145689999999999987643222 12467888888776554

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.42  E-value=4.5e-12  Score=125.18  Aligned_cols=164  Identities=19%  Similarity=0.174  Sum_probs=113.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .++++|+||||+|.||..++++|+++|++|++++|......+.   +....               ...++.++..|+.+
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~---------------~~~~~~~i~~D~~~  178 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHF---------------SNPNFELIRHDVVE  178 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhc---------------cCCceEEEECCccC
Confidence            3678999999999999999999999999999998754321111   11100               12356778889876


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      ..     +       ..+|+|||+|+...+ ..    ..++....+++|+.++.++++++..    .  +.++|++||..
T Consensus       179 ~~-----l-------~~~D~ViHlAa~~~~-~~----~~~~p~~~~~~Nv~gt~nLleaa~~----~--g~r~V~~SS~~  235 (442)
T PLN02206        179 PI-----L-------LEVDQIYHLACPASP-VH----YKFNPVKTIKTNVVGTLNMLGLAKR----V--GARFLLTSTSE  235 (442)
T ss_pred             hh-----h-------cCCCEEEEeeeecch-hh----hhcCHHHHHHHHHHHHHHHHHHHHH----h--CCEEEEECChH
Confidence            52     1       158999999987541 11    1123467889999999999887743    2  24899998863


Q ss_pred             CCCC---------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          191 SGGS---------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       191 ~~~~---------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ....               +......|+.+|.+.+.+++.+.+..   |+++..+.|+.+--|
T Consensus       236 VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp  295 (442)
T PLN02206        236 VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGP  295 (442)
T ss_pred             HhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCC
Confidence            2211               11124579999999999888776553   688888887666443

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.41  E-value=5.1e-12  Score=118.78  Aligned_cols=144  Identities=19%  Similarity=0.148  Sum_probs=102.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +||||||+|.||.+++++|+++| +|+.++|...                                  .+..|++|.+.+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------------------------~~~~Dl~d~~~~   46 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------------------------DYCGDFSNPEGV   46 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------------------------cccCCCCCHHHH
Confidence            69999999999999999999999 7888887521                                  135699999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC--
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG--  192 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~--  192 (368)
                      +++++..     ++|+|||+|+....     +...++-+..+++|+.++.++++++...      +.++|++||....  
T Consensus        47 ~~~~~~~-----~~D~Vih~Aa~~~~-----~~~~~~~~~~~~~N~~~~~~l~~aa~~~------g~~~v~~Ss~~Vy~~  110 (299)
T PRK09987         47 AETVRKI-----RPDVIVNAAAHTAV-----DKAESEPEFAQLLNATSVEAIAKAANEV------GAWVVHYSTDYVFPG  110 (299)
T ss_pred             HHHHHhc-----CCCEEEECCccCCc-----chhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEccceEECC
Confidence            8887643     68999999997541     1122234667789999999998876542      3478998875211  


Q ss_pred             --CC------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          193 --GS------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       193 --~~------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                        ..      +..+...|+.||.+.+.+++....       +...++|+++-
T Consensus       111 ~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vy  155 (299)
T PRK09987        111 TGDIPWQETDATAPLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVY  155 (299)
T ss_pred             CCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CEEEEecceec
Confidence              01      112335799999999998875432       22455555554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.40  E-value=8.1e-12  Score=116.36  Aligned_cols=144  Identities=19%  Similarity=0.237  Sum_probs=107.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+|.||.+++++|+++|++|++++|+                                      .+|+.+.+++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------------------------~~d~~~~~~~   42 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------------------------QLDLTDPEAL   42 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------------------------ccCCCCHHHH
Confidence            37999999999999999999999999998874                                      2488999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++..     ++|++||+||... ..    ...+..+..+++|+.++.++++++..    .  +.++|++||......
T Consensus        43 ~~~~~~~-----~~d~vi~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~v~~Ss~~vy~~  106 (287)
T TIGR01214        43 ERLLRAI-----RPDAVVNTAAYTD-VD----GAESDPEKAFAVNALAPQNLARAAAR----H--GARLVHISTDYVFDG  106 (287)
T ss_pred             HHHHHhC-----CCCEEEECCcccc-cc----ccccCHHHHHHHHHHHHHHHHHHHHH----c--CCeEEEEeeeeeecC
Confidence            8887653     6899999999743 11    11223567789999999999888643    2  247999987521110


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          195 ----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       195 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                                +......|+.+|.+.+.+++.+       +.++..++|+.+-.+.
T Consensus       107 ~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       107 EGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             CCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence                      0113468999999998888754       3578899999886553

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.40  E-value=6.8e-12  Score=118.04  Aligned_cols=162  Identities=17%  Similarity=0.151  Sum_probs=117.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      ||||||+|.||.+++++|+++|++|+.++|...+.....                        ..+.++.+|++|.+.+.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------------------------~~~~~~~~d~~~~~~~~   58 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------------------------SGVEFVVLDLTDRDLVD   58 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------------------------cccceeeecccchHHHH
Confidence            999999999999999999999999999999766532111                        24677899999985555


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  195 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  195 (368)
                      +..+..     . |.+||+|+....  +....+  +....+++|+.++.++++++..    . +..++|+.||.......
T Consensus        59 ~~~~~~-----~-d~vih~aa~~~~--~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~-~~~~~v~~ss~~~~~~~  123 (314)
T COG0451          59 ELAKGV-----P-DAVIHLAAQSSV--PDSNAS--DPAEFLDVNVDGTLNLLEAARA----A-GVKRFVFASSVSVVYGD  123 (314)
T ss_pred             HHHhcC-----C-CEEEEccccCch--hhhhhh--CHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCCCceECCC
Confidence            544421     1 999999998641  111111  4567899999999999888765    2 46688886654212211


Q ss_pred             ----------CCCch--hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          196 ----------TPLTA--VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       196 ----------~~~~~--~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                                .+..+  .|+.||.+.+.+++....   ..|+.+..+.|+.+--|.
T Consensus       124 ~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~  176 (314)
T COG0451         124 PPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPG  176 (314)
T ss_pred             CCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCC
Confidence                      11112  499999999999998887   457999999998776544

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.37  E-value=2.9e-11  Score=105.03  Aligned_cols=172  Identities=20%  Similarity=0.256  Sum_probs=118.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.++                         ..+++.+++|+.|++++.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------------------------~~~~~~~~~d~~d~~~~~   55 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------------------------SPGVEIIQGDLFDPDSVK   55 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------------------------CTTEEEEESCTTCHHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------------------------ccccccceeeehhhhhhh
Confidence            7899999999999999999999999999999987654                         146889999999998888


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  195 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  195 (368)
                      ++++       +.|++|+++|...  .       +             ...++.++..+++. +..+++++|+.+... .
T Consensus        56 ~al~-------~~d~vi~~~~~~~--~-------~-------------~~~~~~~~~a~~~~-~~~~~v~~s~~~~~~-~  104 (183)
T PF13460_consen   56 AALK-------GADAVIHAAGPPP--K-------D-------------VDAAKNIIEAAKKA-GVKRVVYLSSAGVYR-D  104 (183)
T ss_dssp             HHHT-------TSSEEEECCHSTT--T-------H-------------HHHHHHHHHHHHHT-TSSEEEEEEETTGTT-T
T ss_pred             hhhh-------hcchhhhhhhhhc--c-------c-------------cccccccccccccc-ccccceeeeccccCC-C
Confidence            7665       6899999998643  1       1             44556667777766 467999998874333 2


Q ss_pred             CCC---------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          196 TPL---------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       196 ~~~---------~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      .+.         ...|...|...+.+.       ...+++...++||++..+.....................+++|+.+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~  177 (183)
T PF13460_consen  105 PPGLFSDEDKPIFPEYARDKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSYRLIKEGGPQGVNFISREDVAKAI  177 (183)
T ss_dssp             CTSEEEGGTCGGGHHHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSEEEESSTSTTSHCEEEHHHHHHHH
T ss_pred             CCcccccccccchhhhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcceeEEeccCCCCcCcCCHHHHHHHH
Confidence            222         135666665554433       1247999999999987664321111000111111223578888877


Q ss_pred             hhhh
Q 017635          267 VPRI  270 (368)
Q Consensus       267 ~~~~  270 (368)
                      +..+
T Consensus       178 ~~~l  181 (183)
T PF13460_consen  178 VEAL  181 (183)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7554

...

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.37  E-value=7.3e-12  Score=117.63  Aligned_cols=149  Identities=14%  Similarity=0.054  Sum_probs=107.7

Q ss_pred             EEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHHH
Q 017635           37 VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK  116 (368)
Q Consensus        37 lITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~  116 (368)
                      +||||+|.||..+++.|+++|++|+++.+.                                     ..+|++|.+++++
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------------------------~~~Dl~~~~~l~~   43 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------------------------KELDLTRQADVEA   43 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------------------------ccCCCCCHHHHHH
Confidence            699999999999999999999988765421                                     1469999998888


Q ss_pred             HHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC--
Q 017635          117 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS--  194 (368)
Q Consensus       117 ~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~--  194 (368)
                      +++..     ++|+|||+|+.... ..   ...++....+++|+.++.++++.+...     +..++|++||......  
T Consensus        44 ~~~~~-----~~d~Vih~A~~~~~-~~---~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~~  109 (306)
T PLN02725         44 FFAKE-----KPTYVILAAAKVGG-IH---ANMTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKFA  109 (306)
T ss_pred             HHhcc-----CCCEEEEeeeeecc-cc---hhhhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCCC
Confidence            77652     68999999997431 11   011223457889999999998877532     3468999988532110  


Q ss_pred             ------------C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          195 ------------S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       195 ------------~-~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                                  + .|....|+.||.+.+.+.+.+.++.   ++++..+.|+.+--+.
T Consensus       110 ~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        110 PQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH  164 (306)
T ss_pred             CCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence                        0 0112359999999999888876654   6899999998886553

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.37  E-value=1.7e-11  Score=120.96  Aligned_cols=163  Identities=19%  Similarity=0.169  Sum_probs=112.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++++|+||||+|.||..++++|+++|++|++++|...........+.                  ...++.++..|+.+.
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~------------------~~~~~~~~~~Di~~~  180 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF------------------GNPRFELIRHDVVEP  180 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc------------------cCCceEEEECccccc
Confidence            45789999999999999999999999999999986422111111110                  113567788888764


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      .     +       .++|+|||+|+...+ .. ..   .+....+++|+.|+.++++++...      +.++|++||...
T Consensus       181 ~-----~-------~~~D~ViHlAa~~~~-~~-~~---~~p~~~~~~Nv~gT~nLleaa~~~------g~r~V~~SS~~V  237 (436)
T PLN02166        181 I-----L-------LEVDQIYHLACPASP-VH-YK---YNPVKTIKTNVMGTLNMLGLAKRV------GARFLLTSTSEV  237 (436)
T ss_pred             c-----c-------cCCCEEEECceeccc-hh-hc---cCHHHHHHHHHHHHHHHHHHHHHh------CCEEEEECcHHH
Confidence            2     1       258999999987541 11 11   234678999999999998776542      247999987632


Q ss_pred             CCC---------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          192 GGS---------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       192 ~~~---------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ...               +......|+.+|.+.+.+++.+.+..   ++++..+.|+.+--+
T Consensus       238 Yg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp  296 (436)
T PLN02166        238 YGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGP  296 (436)
T ss_pred             hCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCC
Confidence            111               11123569999999999998876553   688888887766544

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.36  E-value=2e-11  Score=115.68  Aligned_cols=147  Identities=14%  Similarity=0.101  Sum_probs=106.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|.||++++++|+++|++|.+++|+.++..    .+..                   ..+.++.+|++|++++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~~-------------------~~v~~v~~Dl~d~~~l   58 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLKE-------------------WGAELVYGDLSLPETL   58 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHhh-------------------cCCEEEECCCCCHHHH
Confidence            6999999999999999999999999999999865432    1111                   2477899999999988


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .++++       .+|++||+++...  .        +.....++|+.++.++++++..    . +-.++|++||.++...
T Consensus        59 ~~al~-------g~d~Vi~~~~~~~--~--------~~~~~~~~~~~~~~~l~~aa~~----~-gvkr~I~~Ss~~~~~~  116 (317)
T CHL00194         59 PPSFK-------GVTAIIDASTSRP--S--------DLYNAKQIDWDGKLALIEAAKA----A-KIKRFIFFSILNAEQY  116 (317)
T ss_pred             HHHHC-------CCCEEEECCCCCC--C--------CccchhhhhHHHHHHHHHHHHH----c-CCCEEEEecccccccc
Confidence            77664       5899999876422  1        1123566788888888776643    2 3568999987532211


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                         +...|..+|...+.+.+       ..|++...++|+.+-
T Consensus       117 ---~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~  148 (317)
T CHL00194        117 ---PYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFF  148 (317)
T ss_pred             ---CCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHh
Confidence               23468888988776543       247888999998553

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.28  E-value=4.4e-11  Score=109.44  Aligned_cols=173  Identities=21%  Similarity=0.252  Sum_probs=98.9

Q ss_pred             EEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH---
Q 017635           38 ITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA---  112 (368)
Q Consensus        38 ITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~---  112 (368)
                      ||||||.||..+.++|++++.  +|+++.|..... ...+.+.+..........   .......+++++..|++++.   
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~-~~~~rl~~~l~~~~~~~~---~~~~~~~ri~~v~GDl~~~~lGL   76 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ-SALERLKDALKEYGLWDD---LDKEALSRIEVVEGDLSQPNLGL   76 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH-HHHHHHHGGG-SS-HHHH---H-HHHTTTEEEEE--TTSGGGG-
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc-cchhhhhhhcccccchhh---hhhhhhccEEEEeccccccccCC
Confidence            799999999999999999886  899999976331 122222221110000000   00001468999999999853   


Q ss_pred             ---HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          113 ---DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       113 ---~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                         +.+.+.+       .+|++||||+......        .++...++|+.|+.++++.+..    . +..+++++||.
T Consensus        77 ~~~~~~~L~~-------~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~----~-~~~~~~~iSTa  136 (249)
T PF07993_consen   77 SDEDYQELAE-------EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQ----G-KRKRFHYISTA  136 (249)
T ss_dssp             -HHHHHHHHH-------H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTS----S-S---EEEEEEG
T ss_pred             ChHHhhcccc-------ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHh----c-cCcceEEeccc
Confidence               3444433       4899999999765211        2445778999999999887742    2 33489999984


Q ss_pred             CCCCCCC-------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          190 GSGGSST-------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       190 ~~~~~~~-------------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                      .......                   .....|..||...|.+.+..+.+.   |+.+..++||.|-.
T Consensus       137 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  137 YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             GGTTS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             cccCCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence            2211111                   223589999999999999887763   78999999998866

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02996 fatty acyl-CoA reductase

Probab=99.27  E-value=1.2e-10  Score=116.57  Aligned_cols=185  Identities=19%  Similarity=0.220  Sum_probs=116.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChHH---HHHHHHHHHHH-hhhhhhhcCCCCcccccCceeEE
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSES---VRMTVTELEEN-LKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G---~~Vil~~R~~~~---~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      ++||+|+||||+|.||+.++++|++.+   .+|++..|....   .+....++... .-+.....-+..-......++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            578999999999999999999999865   368888886531   11111121110 00000000000000001257899


Q ss_pred             EeccCCC-------HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635          104 IACDVCE-------PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus       104 ~~~Dv~~-------~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      +..|+++       .+.++++++       .+|+|||+|+... +    +   ++.+..+++|+.|+.++++.+...   
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~-~----~---~~~~~~~~~Nv~gt~~ll~~a~~~---  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTN-F----D---ERYDVALGINTLGALNVLNFAKKC---  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccC-C----c---CCHHHHHHHHHHHHHHHHHHHHhc---
Confidence            9999984       333444433       5899999999754 1    1   245778999999999998876432   


Q ss_pred             CCCCcEEEEEcCCCCCCC-C-------CC---------------------------------------------------
Q 017635          177 QPKGGHIFNMDGAGSGGS-S-------TP---------------------------------------------------  197 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~-~-------~~---------------------------------------------------  197 (368)
                       ++..++|++||...... .       .+                                                   
T Consensus       151 -~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 -VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             12357899887532211 0       00                                                   


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          198 --LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       198 --~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                        ....|+.||+..+.+++..+     .|+.+..++|+.|-.+.
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~  268 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTY  268 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCC
Confidence              11359999999999986542     27999999999987654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.25  E-value=2e-10  Score=119.42  Aligned_cols=164  Identities=20%  Similarity=0.192  Sum_probs=110.7

Q ss_pred             eEEEEcCCChHHHHHHHHHH--HCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFL--LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la--~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+||||+|.||.+++++|+  ++|++|++++|+....  ...++....               ...++.++.+|++|++
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~--~~~~~~~~~---------------~~~~v~~~~~Dl~~~~   64 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS--RLEALAAYW---------------GADRVVPLVGDLTEPG   64 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH--HHHHHHHhc---------------CCCcEEEEecccCCcc
Confidence            69999999999999999999  5899999999965321  111221110               1146888999999853


Q ss_pred             HH--HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          113 DV--QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       113 ~v--~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      ..  ....+.+    .++|++||+||... ..    .+   .....++|+.++.++++.+..    . +..++|++||..
T Consensus        65 ~~~~~~~~~~l----~~~D~Vih~Aa~~~-~~----~~---~~~~~~~nv~gt~~ll~~a~~----~-~~~~~v~~SS~~  127 (657)
T PRK07201         65 LGLSEADIAEL----GDIDHVVHLAAIYD-LT----AD---EEAQRAANVDGTRNVVELAER----L-QAATFHHVSSIA  127 (657)
T ss_pred             CCcCHHHHHHh----cCCCEEEECceeec-CC----CC---HHHHHHHHhHHHHHHHHHHHh----c-CCCeEEEEeccc
Confidence            10  1111222    37999999999753 11    12   245678899999888776543    2 356899998863


Q ss_pred             CCCCC------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          191 SGGSS------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       191 ~~~~~------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .....            ......|+.||...+.+.+.      ..|+++..++|+.|-.+
T Consensus       128 v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        128 VAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             cccCccCccccccchhhcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence            32110            11235699999999988753      24799999999988543

>PRK05865 hypothetical protein; Provisional

Probab=99.24  E-value=2e-10  Score=120.15  Aligned_cols=130  Identities=18%  Similarity=0.225  Sum_probs=100.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+|+||++++++|+++|++|++++|+....      .                    ...+.++.+|++|.+++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~--------------------~~~v~~v~gDL~D~~~l   55 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W--------------------PSSADFIAADIRDATAV   55 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c--------------------ccCceEEEeeCCCHHHH
Confidence            699999999999999999999999999999975321      0                    12467789999999998


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .++++       ++|++||+|+...   +           .+++|+.++.+++++    +++. +.+++|++||..    
T Consensus        56 ~~al~-------~vD~VVHlAa~~~---~-----------~~~vNv~GT~nLLeA----a~~~-gvkr~V~iSS~~----  105 (854)
T PRK05865         56 ESAMT-------GADVVAHCAWVRG---R-----------NDHINIDGTANVLKA----MAET-GTGRIVFTSSGH----  105 (854)
T ss_pred             HHHHh-------CCCEEEECCCccc---c-----------hHHHHHHHHHHHHHH----HHHc-CCCeEEEECCcH----
Confidence            87765       4899999998632   1           367899998877655    4444 456899998751    


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                                 |.+.+.+.+    +   .|+.+..+.|+.+-.+
T Consensus       106 -----------K~aaE~ll~----~---~gl~~vILRp~~VYGP  131 (854)
T PRK05865        106 -----------QPRVEQMLA----D---CGLEWVAVRCALIFGR  131 (854)
T ss_pred             -----------HHHHHHHHH----H---cCCCEEEEEeceEeCC
Confidence                       777776553    2   4789999999887654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.21  E-value=4.4e-11  Score=107.63  Aligned_cols=101  Identities=19%  Similarity=0.243  Sum_probs=79.5

Q ss_pred             eEEEEcC-CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGS-TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGa-s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +=.||.. +||||+++|++|+++|++|+++++...        +..                 . .   ...+|+++.++
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-----------------~-~---~~~~Dv~d~~s   66 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-----------------E-P---HPNLSIREIET   66 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-----------------c-c---CCcceeecHHH
Confidence            4455554 679999999999999999999886311        100                 0 0   14589999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHH
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTR  168 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  168 (368)
                      ++++++.+.+.++++|++|||||+.. +.++.+.+.++|+++   +..+.+++.+
T Consensus        67 ~~~l~~~v~~~~g~iDiLVnnAgv~d-~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        67 TKDLLITLKELVQEHDILIHSMAVSD-YTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             HHHHHHHHHHHcCCCCEEEECCEecc-ccchhhCCHHHHhhh---cchhhhhccc
Confidence            99999999999999999999999875 688889999999977   4456666665

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.19  E-value=6.4e-10  Score=104.50  Aligned_cols=131  Identities=15%  Similarity=0.070  Sum_probs=87.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .+++|||||+|.||.+++++|+++|++|+...+                                         |+.|.+
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-----------------------------------------~~~~~~   47 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-----------------------------------------RLENRA   47 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-----------------------------------------ccCCHH
Confidence            468999999999999999999999999874321                                         334445


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC-
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-  191 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~-  191 (368)
                      .+...++.     .++|+|||+||.... .. .+...++....+++|+.++.++++++...     +-..+ ++||... 
T Consensus        48 ~v~~~l~~-----~~~D~ViH~Aa~~~~-~~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v-~~sS~~vy  114 (298)
T PLN02778         48 SLEADIDA-----VKPTHVFNAAGVTGR-PN-VDWCESHKVETIRANVVGTLTLADVCRER-----GLVLT-NYATGCIF  114 (298)
T ss_pred             HHHHHHHh-----cCCCEEEECCcccCC-CC-chhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEE-EEecceEe
Confidence            45444433     268999999997541 11 11223445778999999999998887543     22344 4443211 


Q ss_pred             CC-C---------------CCCCchhhHHHHHHHHHHHHHHH
Q 017635          192 GG-S---------------STPLTAVYGSTKCGLRQLQASLF  217 (368)
Q Consensus       192 ~~-~---------------~~~~~~~Y~aSKaal~~l~~~la  217 (368)
                      +. .               +.+....|+.||.+.+.+++.++
T Consensus       115 ~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        115 EYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhh
Confidence            11 0               01123579999999999998765

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.19  E-value=6.3e-10  Score=104.34  Aligned_cols=174  Identities=24%  Similarity=0.303  Sum_probs=118.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC--
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE--  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~--  110 (368)
                      +++++|||||.||..+.++|+.+- ++|++..|-... +...+.|++....      ..........++..+..|++.  
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~-E~a~~RL~~~~~~------~~~~~e~~~~ri~vv~gDl~e~~   73 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSD-EAALARLEKTFDL------YRHWDELSADRVEVVAGDLAEPD   73 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCH-HHHHHHHHHHhhh------hhhhhhhhcceEEEEeccccccc
Confidence            579999999999999999998764 699999885432 2222333322210      000011134689999999993  


Q ss_pred             ----HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          111 ----PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       111 ----~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                          ....+++++       .+|.+|||++......|        ..+....|+.|+..+++.+.-     ++...+.++
T Consensus        74 lGL~~~~~~~La~-------~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa~~-----gk~Kp~~yV  133 (382)
T COG3320          74 LGLSERTWQELAE-------NVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLAAT-----GKPKPLHYV  133 (382)
T ss_pred             CCCCHHHHHHHhh-------hcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHHhc-----CCCceeEEE
Confidence                344555544       58999999997653222        466778999999999887643     245568899


Q ss_pred             cCCCCCCCC-------------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          187 DGAGSGGSS-------------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       187 sS~~~~~~~-------------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ||+..+...                   ......|+-||.+.+.+++...    ..|+++..++||+|-.+
T Consensus       134 Ssisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~----~rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         134 SSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG----DRGLPVTIFRPGYITGD  200 (382)
T ss_pred             eeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHh----hcCCCeEEEecCeeecc
Confidence            886432211                   1223679999999888887544    44899999999999654

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.19  E-value=4.7e-09  Score=86.73  Aligned_cols=181  Identities=17%  Similarity=0.133  Sum_probs=126.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ..+|+|-||-+.+|.++++.|-++++-|.-++-.+..-                          . ..-..+..|-+=.+
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~--------------------------A-d~sI~V~~~~swtE   55 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ--------------------------A-DSSILVDGNKSWTE   55 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc--------------------------c-cceEEecCCcchhH
Confidence            46799999999999999999999999988777654221                          0 11223344444445


Q ss_pred             HHHHHHHHHHhHc--CCCCEEEEccCCCCCCCCCC-CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          113 DVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLL-QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       113 ~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +-+.+.+++-+..  .++|.+++-||...+ +.-. .--.++.+.++.-.+.....-.+.+..+++    .|-++.+...
T Consensus        56 Qe~~v~~~vg~sL~gekvDav~CVAGGWAG-GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK----~GGLL~LtGA  130 (236)
T KOG4022|consen   56 QEQSVLEQVGSSLQGEKVDAVFCVAGGWAG-GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLK----PGGLLQLTGA  130 (236)
T ss_pred             HHHHHHHHHHHhhcccccceEEEeeccccC-CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccC----CCceeeeccc
Confidence            6666666665544  369999999987652 2211 111123445555556666556666666663    4456667666


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccccCcc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGST  245 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~  245 (368)
                      .+...+.|++..|+.+|+|+++++++|+.+-.  +.|--+.+|.|=..+|||.+...+
T Consensus       131 kaAl~gTPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP  188 (236)
T KOG4022|consen  131 KAALGGTPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP  188 (236)
T ss_pred             ccccCCCCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence            67888999999999999999999999998754  467788999999999999876543

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.14  E-value=9.9e-10  Score=100.48  Aligned_cols=127  Identities=22%  Similarity=0.265  Sum_probs=101.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      +||||++|-+|.++++.|. .+++|+.++|.                                      .+|++|++.+.
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~--------------------------------------~~Ditd~~~v~   43 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRA--------------------------------------ELDITDPDAVL   43 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCc--------------------------------------cccccChHHHH
Confidence            9999999999999999998 66899988763                                      26999999999


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC--CC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GG  193 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~--~~  193 (368)
                      +++.+.     ++|++||+|++...     +.-+.+-+..+.+|..|+.++++++-.      -+..+|.+|+-..  |.
T Consensus        44 ~~i~~~-----~PDvVIn~AAyt~v-----D~aE~~~e~A~~vNa~~~~~lA~aa~~------~ga~lVhiSTDyVFDG~  107 (281)
T COG1091          44 EVIRET-----RPDVVINAAAYTAV-----DKAESEPELAFAVNATGAENLARAAAE------VGARLVHISTDYVFDGE  107 (281)
T ss_pred             HHHHhh-----CCCEEEECcccccc-----ccccCCHHHHHHhHHHHHHHHHHHHHH------hCCeEEEeecceEecCC
Confidence            999876     89999999998652     233344688999999999999998854      3678999986321  11


Q ss_pred             CC--------CCCchhhHHHHHHHHHHHHHHH
Q 017635          194 SS--------TPLTAVYGSTKCGLRQLQASLF  217 (368)
Q Consensus       194 ~~--------~~~~~~Y~aSKaal~~l~~~la  217 (368)
                      .+        ..+...||.||.+-+..++...
T Consensus       108 ~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091         108 KGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             CCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence            11        2345689999999999887654

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.13  E-value=5.2e-10  Score=104.45  Aligned_cols=143  Identities=23%  Similarity=0.257  Sum_probs=99.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ++||||++|-||.++.+.|.++|++|+.++|+                                      .+|++|.+++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------------------------~~dl~d~~~~   43 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS--------------------------------------DLDLTDPEAV   43 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------------------------CS-TTSHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------------------------hcCCCCHHHH
Confidence            69999999999999999999999999988764                                      4599999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC--C
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--G  192 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~--~  192 (368)
                      .+++++.     ++|+|||+||...+     +.-.++-+..+.+|+.++..+++.+..      .+.++|++||...  +
T Consensus        44 ~~~~~~~-----~pd~Vin~aa~~~~-----~~ce~~p~~a~~iN~~~~~~la~~~~~------~~~~li~~STd~VFdG  107 (286)
T PF04321_consen   44 AKLLEAF-----KPDVVINCAAYTNV-----DACEKNPEEAYAINVDATKNLAEACKE------RGARLIHISTDYVFDG  107 (286)
T ss_dssp             HHHHHHH-------SEEEE------H-----HHHHHSHHHHHHHHTHHHHHHHHHHHH------CT-EEEEEEEGGGS-S
T ss_pred             HHHHHHh-----CCCeEeccceeecH-----HhhhhChhhhHHHhhHHHHHHHHHHHH------cCCcEEEeeccEEEcC
Confidence            9998776     69999999997541     223345678999999999999888754      3679999998521  1


Q ss_pred             CCC--------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          193 GSS--------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       193 ~~~--------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ..+        ..+...|+.+|...+...+...    +   +...+++|++-.+
T Consensus       108 ~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~  154 (286)
T PF04321_consen  108 DKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAAC----P---NALILRTSWVYGP  154 (286)
T ss_dssp             STSSSB-TTS----SSHHHHHHHHHHHHHHHH-----S---SEEEEEE-SEESS
T ss_pred             CcccccccCCCCCCCCHHHHHHHHHHHHHHHhc----C---CEEEEecceeccc
Confidence            111        1224689999999998877622    1   4556667666544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.12  E-value=7.2e-10  Score=104.88  Aligned_cols=170  Identities=15%  Similarity=0.155  Sum_probs=120.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++.+++||||+|.+|++++++|.+++  .+|.+++..+.... ..++....                ...++.++.+|+.
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~----------------~~~~v~~~~~D~~   65 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGF----------------RSGRVTVILGDLL   65 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhcc----------------cCCceeEEecchh
Confidence            56899999999999999999999999  78999988764211 11111100                2467899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |..++.+.++       +. .++|+|....+     +.-..+-+..+++|+.|+-+++..+...     +..++|++||.
T Consensus        66 ~~~~i~~a~~-------~~-~Vvh~aa~~~~-----~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~  127 (361)
T KOG1430|consen   66 DANSISNAFQ-------GA-VVVHCAASPVP-----DFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSA  127 (361)
T ss_pred             hhhhhhhhcc-------Cc-eEEEeccccCc-----cccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCc
Confidence            9988877665       45 67777765431     2222356889999999988887776543     57789999886


Q ss_pred             CCCCC-----------CCCC--chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          190 GSGGS-----------STPL--TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       190 ~~~~~-----------~~~~--~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .....           +.|.  ...|+.||+-.+.+++..+.   ..+....+++|-.|--|.
T Consensus       128 ~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpg  187 (361)
T KOG1430|consen  128 YVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPG  187 (361)
T ss_pred             eEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCC
Confidence            43222           2232  24899999998888876654   346888899997775553

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.09  E-value=1.4e-09  Score=94.02  Aligned_cols=84  Identities=14%  Similarity=0.175  Sum_probs=71.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+ |+|.+++++|+++|++|++++|+.++.+.+...+..                  ..++.++.+|++|.+++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~------------------~~~i~~~~~Dv~d~~sv   62 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT------------------PESITPLPLDYHDDDAL   62 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc------------------CCcEEEEEccCCCHHHH
Confidence            68999998 788889999999999999999998776655443321                  24678899999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +++++.+.+++|++|++|+..-.
T Consensus        63 ~~~i~~~l~~~g~id~lv~~vh~   85 (177)
T PRK08309         63 KLAIKSTIEKNGPFDLAVAWIHS   85 (177)
T ss_pred             HHHHHHHHHHcCCCeEEEEeccc
Confidence            99999999999999999987654

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.06  E-value=8.1e-09  Score=104.87  Aligned_cols=140  Identities=20%  Similarity=0.304  Sum_probs=88.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHH--HHHHH-HHHHHH-hhhhhhhcCCCCcccccCceeEE
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSES--VRMTV-TELEEN-LKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~---~Vil~~R~~~~--~~~~~-~~l~~~-~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +++|+|+||||+|.||+.++++|++.+.   +|+++.|....  ..+.. +++.+. .-+...+..+..-......++..
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5799999999999999999999998763   68888885432  22221 222110 00000000000000111357899


Q ss_pred             EeccCCCH------HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635          104 IACDVCEP------ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus       104 ~~~Dv~~~------~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      +..|++++      +..+.+.+       .+|++||+|+... +    +   ++.+..+++|+.|+.++++.+...    
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~-f----~---~~~~~a~~vNV~GT~nLLelA~~~----  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTT-F----D---ERYDVAIDINTRGPCHLMSFAKKC----  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccc-c----c---cCHHHHHHHHHHHHHHHHHHHHHc----
Confidence            99999987      23333322       5899999999754 1    1   346778999999999998876542    


Q ss_pred             CCCcEEEEEcCC
Q 017635          178 PKGGHIFNMDGA  189 (368)
Q Consensus       178 ~~~g~Iv~isS~  189 (368)
                      ++..++|++||.
T Consensus       258 ~~lk~fV~vSTa  269 (605)
T PLN02503        258 KKLKLFLQVSTA  269 (605)
T ss_pred             CCCCeEEEccCc
Confidence            123468888875

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.00  E-value=1.4e-08  Score=94.67  Aligned_cols=175  Identities=13%  Similarity=0.021  Sum_probs=106.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+|.+|++++++|+++|++|.+++|+.++..                          ...+..+.+|+.|++++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--------------------------~~~~~~~~~d~~d~~~l   54 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--------------------------GPNEKHVKFDWLDEDTW   54 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--------------------------CCCCccccccCCCHHHH
Confidence            4899999999999999999999999999999976431                          01344567899999999


Q ss_pred             HHHHHHHHhHcCC-CCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          115 QKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       115 ~~~~~~i~~~~g~-iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      .++++.. +.+.. +|.++++++...        .  ..+            ..+.++..+++. +-.+||++||.+.. 
T Consensus        55 ~~a~~~~-~~~~g~~d~v~~~~~~~~--------~--~~~------------~~~~~i~aa~~~-gv~~~V~~Ss~~~~-  109 (285)
T TIGR03649        55 DNPFSSD-DGMEPEISAVYLVAPPIP--------D--LAP------------PMIKFIDFARSK-GVRRFVLLSASIIE-  109 (285)
T ss_pred             HHHHhcc-cCcCCceeEEEEeCCCCC--------C--hhH------------HHHHHHHHHHHc-CCCEEEEeeccccC-
Confidence            9887543 22334 899999876421        0  001            112334455555 46799999875322 


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCc-c-c------c-hhhhhhhhcCCHHHHHH
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS-T-I------Q-NKQMFNIICELPETVAR  264 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-~-~------~-~~~~~~~~~~~pe~~a~  264 (368)
                      .+.       ..+...+.+.+.      ..|+....++|+++..++..... . .      . ...-........+++|+
T Consensus       110 ~~~-------~~~~~~~~~l~~------~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~  176 (285)
T TIGR03649       110 KGG-------PAMGQVHAHLDS------LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIAR  176 (285)
T ss_pred             CCC-------chHHHHHHHHHh------ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHH
Confidence            111       122222222221      13899999999977654421100 0 0      0 00000111235788888


Q ss_pred             Hhhhhhhhc
Q 017635          265 TLVPRIRVV  273 (368)
Q Consensus       265 ~~~~~~~~~  273 (368)
                      .+...+..+
T Consensus       177 ~~~~~l~~~  185 (285)
T TIGR03649       177 VAYRALTDK  185 (285)
T ss_pred             HHHHHhcCC
Confidence            877666544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.99  E-value=1.3e-08  Score=106.26  Aligned_cols=142  Identities=14%  Similarity=0.097  Sum_probs=98.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .+++|||||+|.||+++++.|.++|++|...                                         ..|++|.+
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------------------------~~~l~d~~  418 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------------------------KGRLEDRS  418 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------------------------ccccccHH
Confidence            4579999999999999999999999887311                                         13677888


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC-
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-  191 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~-  191 (368)
                      .+++.++..     ++|+|||+|+....  +-.+...++-+..+++|+.++.++++++...      +.+.+++||... 
T Consensus       419 ~v~~~i~~~-----~pd~Vih~Aa~~~~--~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~------g~~~v~~Ss~~v~  485 (668)
T PLN02260        419 SLLADIRNV-----KPTHVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCREN------GLLMMNFATGCIF  485 (668)
T ss_pred             HHHHHHHhh-----CCCEEEECCcccCC--CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc------CCeEEEEccccee
Confidence            877776543     69999999997531  1122334456788999999999999887542      234556654321 


Q ss_pred             CC---------CC-------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 017635          192 GG---------SS-------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  231 (368)
Q Consensus       192 ~~---------~~-------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~  231 (368)
                      +.         .+       .+....|+.||.+.+.+++.+...   ..+|+..+.
T Consensus       486 ~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        486 EYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             cCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence            10         01       122368999999999999876422   346666655

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.99  E-value=7.2e-09  Score=96.48  Aligned_cols=157  Identities=17%  Similarity=0.141  Sum_probs=92.7

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      ||||||+|.||.+++++|+++|++|++++|+.++.....                         ...  ..|+.. +.. 
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------------------------~~~--~~~~~~-~~~-   51 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-------------------------WEG--YKPWAP-LAE-   51 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-------------------------cee--eecccc-cch-
Confidence            689999999999999999999999999999876532110                         000  112221 111 


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEEcCCCCCC-
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDGAGSGG-  193 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS~~~~~-  193 (368)
                            .+.+..+|+|||+||....   ..+.+.+..+..+++|+.++.++.+++..    .+. ..+++..|+..... 
T Consensus        52 ------~~~~~~~D~Vvh~a~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~~i~~S~~~~yg~  118 (292)
T TIGR01777        52 ------SEALEGADAVINLAGEPIA---DKRWTEERKQEIRDSRIDTTRALVEAIAA----AEQKPKVFISASAVGYYGT  118 (292)
T ss_pred             ------hhhcCCCCEEEECCCCCcc---cccCCHHHHHHHHhcccHHHHHHHHHHHh----cCCCceEEEEeeeEEEeCC
Confidence                  2233579999999997431   12344556677889999998888777643    221 12344444321111 


Q ss_pred             ---CCC-----C-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          194 ---SST-----P-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       194 ---~~~-----~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                         .+.     + ....|+..|...+...+    .+...++.+..++|+.+-.+
T Consensus       119 ~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~  168 (292)
T TIGR01777       119 SEDRVFTEEDSPAGDDFLAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP  168 (292)
T ss_pred             CCCCCcCcccCCCCCChHHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence               010     0 11123333333333322    23345799999999998654

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.98  E-value=1.6e-09  Score=97.32  Aligned_cols=175  Identities=16%  Similarity=0.102  Sum_probs=127.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++||||-+|--|.-+|+.|+++|+.|..+.|+........-.|.+.             +...+.+++.+.+|++|..
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~-------------~~~~~~~l~l~~gDLtD~~   68 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED-------------PHLNDPRLHLHYGDLTDSS   68 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccc-------------cccCCceeEEEeccccchH
Confidence            689999999999999999999999999999988743321110022111             1113456889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++.++++.+     ++|-+.|-|+...     ...+.++...+.+++.+|++++..++.-. -  ++..++..-||+.-.
T Consensus        69 ~l~r~l~~v-----~PdEIYNLaAQS~-----V~vSFe~P~~T~~~~~iGtlrlLEaiR~~-~--~~~~rfYQAStSE~f  135 (345)
T COG1089          69 NLLRILEEV-----QPDEIYNLAAQSH-----VGVSFEQPEYTADVDAIGTLRLLEAIRIL-G--EKKTRFYQASTSELY  135 (345)
T ss_pred             HHHHHHHhc-----Cchhheecccccc-----ccccccCcceeeeechhHHHHHHHHHHHh-C--CcccEEEecccHHhh
Confidence            999999887     7999999988654     34566667788999999999997775332 1  134567666654211


Q ss_pred             ----------CCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecC
Q 017635          193 ----------GSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPG  233 (368)
Q Consensus       193 ----------~~~~~~~~~Y~aSKaal~~l~~~la~e~~---~~gI~v~~v~PG  233 (368)
                                ..|+.+.++|+++|....-++...+..+.   -.||-+|.=+|.
T Consensus       136 G~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~  189 (345)
T COG1089         136 GLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL  189 (345)
T ss_pred             cCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence                      12345668999999999888888887654   357777766664

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.94  E-value=3.3e-08  Score=111.30  Aligned_cols=176  Identities=18%  Similarity=0.199  Sum_probs=114.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G----~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ++++|+||||+|.||..++++|++++    .+|++..|+...... .+.+.+.....     +.... ....++.++.+|
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~-----~~~~~-~~~~~i~~~~gD 1042 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTY-----GIWDE-EWASRIEVVLGD 1042 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHh-----CCCch-hhhcceEEEecc
Confidence            35899999999999999999999987    789999997543222 22232211100     00000 012368889999


Q ss_pred             CCCH------HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          108 VCEP------ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       108 v~~~------~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      ++++      +..+++    .   ..+|++||||+....     ..+   +......|+.|+.++++.+..    . +..
T Consensus      1043 l~~~~lgl~~~~~~~l----~---~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~~----~-~~~ 1102 (1389)
T TIGR03443      1043 LSKEKFGLSDEKWSDL----T---NEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCAE----G-KAK 1102 (1389)
T ss_pred             CCCccCCcCHHHHHHH----H---hcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHHh----C-CCc
Confidence            9854      222222    1   368999999997531     122   334456799999999887643    2 345


Q ss_pred             EEEEEcCCCCCCC----------------CC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 017635          182 HIFNMDGAGSGGS----------------ST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM  234 (368)
Q Consensus       182 ~Iv~isS~~~~~~----------------~~-----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~  234 (368)
                      +++++||......                +.           .....|+.||.+.+.+++..+.    .|+.+..++||.
T Consensus      1103 ~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~ 1178 (1389)
T TIGR03443      1103 QFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGY 1178 (1389)
T ss_pred             eEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCc
Confidence            8999988532210                00           0123599999999998876543    389999999999


Q ss_pred             ccCc
Q 017635          235 VLTD  238 (368)
Q Consensus       235 v~T~  238 (368)
                      |-.+
T Consensus      1179 v~G~ 1182 (1389)
T TIGR03443      1179 VTGD 1182 (1389)
T ss_pred             cccC
Confidence            8654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.86  E-value=2.5e-07  Score=91.11  Aligned_cols=226  Identities=15%  Similarity=0.120  Sum_probs=140.5

Q ss_pred             cccCCCCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           27 EHCKAGPRNVVITGST-RGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        27 ~~~~~~~k~vlITGas-~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      +...+.+|++|||||+ +.||.+++.+|++-|++||++..+ .++..+..+.|-..+..             .+..+.++
T Consensus       390 ~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~-------------~ga~LwvV  456 (866)
T COG4982         390 NGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHAR-------------YGAALWVV  456 (866)
T ss_pred             CCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCC-------------CCceEEEE
Confidence            3456789999999998 569999999999999999998554 34444555666554332             56778899


Q ss_pred             eccCCCHHHHHHHHHHHHhHcC--------------CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHH
Q 017635          105 ACDVCEPADVQKLSNFAVNEFG--------------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREA  170 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g--------------~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  170 (368)
                      ..++.+..+|+.+++.|-++..              .+|.++--|.... .+.+.+.... -+..+++-+.....++-.+
T Consensus       457 paN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl  534 (866)
T COG4982         457 PANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGL  534 (866)
T ss_pred             eccccchhhHHHHHHHhccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999965431              3678888777655 3455554432 2333444444444443333


Q ss_pred             HHHHHcCC--CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCccc-CcccccCccc
Q 017635          171 MRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVL-TDLLLSGSTI  246 (368)
Q Consensus       171 lp~m~~~~--~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~-T~~~~~~~~~  246 (368)
                      .+.-..++  ..-++|.=.|...+  .+.+-.+|+-||++++.+..-+..|-. ..-+.+.....||++ |.++......
T Consensus       535 ~~~~s~r~v~~R~hVVLPgSPNrG--~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndii  612 (866)
T COG4982         535 KKQGSSRGVDTRLHVVLPGSPNRG--MFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDII  612 (866)
T ss_pred             hhhccccCcccceEEEecCCCCCC--ccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchh
Confidence            33221111  12355554444222  244567999999999999887776642 123666666779987 5555332211


Q ss_pred             -chhhhhhhhcCCHHHHHHHhhhh
Q 017635          247 -QNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       247 -~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ..-+-...-..+++++|..++..
T Consensus       613 v~aiEk~GV~tyS~~EmA~~LLgL  636 (866)
T COG4982         613 VAAIEKAGVRTYSTDEMAFNLLGL  636 (866)
T ss_pred             HHHHHHhCceecCHHHHHHHHHhh
Confidence             11111223334566666666543

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.81  E-value=2.2e-08  Score=97.14  Aligned_cols=82  Identities=24%  Similarity=0.318  Sum_probs=63.7

Q ss_pred             CCCCCeEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCc
Q 017635           30 KAGPRNVVITGS---------------TRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        30 ~~~~k~vlITGa---------------s~G-IG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      +++||++|||||               |+| +|+++|++|+++|++|++++++.+ ++       .              
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~--------------  242 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T--------------  242 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C--------------
Confidence            578999999999               455 999999999999999999998752 10       0              


Q ss_pred             ccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC
Q 017635           94 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP  143 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~  143 (368)
                         + ..  ...+|+++.+++.+.++   +.++++|++|||||+.. +.+
T Consensus       243 ---~-~~--~~~~dv~~~~~~~~~v~---~~~~~~DilI~~Aav~d-~~~  282 (399)
T PRK05579        243 ---P-AG--VKRIDVESAQEMLDAVL---AALPQADIFIMAAAVAD-YRP  282 (399)
T ss_pred             ---C-CC--cEEEccCCHHHHHHHHH---HhcCCCCEEEEcccccc-ccc
Confidence               1 11  24679999888877665   55789999999999865 444

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.80  E-value=3.6e-08  Score=88.72  Aligned_cols=159  Identities=21%  Similarity=0.224  Sum_probs=94.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |+||||+|-||++++.+|.+.|++|+++.|+..+.+...                       +..       +...+.+.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~-----------------------~~~-------v~~~~~~~   50 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL-----------------------HPN-------VTLWEGLA   50 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc-----------------------Ccc-------ccccchhh
Confidence            589999999999999999999999999999987643211                       001       11112222


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  195 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  195 (368)
                      ...+      .++|+|||-||.....+   ..+.+.=+..++.    -+..++.+.....+...+.++..-.|+ .++++
T Consensus        51 ~~~~------~~~DavINLAG~~I~~r---rWt~~~K~~i~~S----Ri~~T~~L~e~I~~~~~~P~~~isaSA-vGyYG  116 (297)
T COG1090          51 DALT------LGIDAVINLAGEPIAER---RWTEKQKEEIRQS----RINTTEKLVELIAASETKPKVLISASA-VGYYG  116 (297)
T ss_pred             hccc------CCCCEEEECCCCccccc---cCCHHHHHHHHHH----HhHHHHHHHHHHHhccCCCcEEEecce-EEEec
Confidence            2111      16999999999754211   2466655666554    444555555555544344444443343 45555


Q ss_pred             CCCchhhHHHHH----HHHHHHHHHHHH---hCCCCeEEEEEecCcccCc
Q 017635          196 TPLTAVYGSTKC----GLRQLQASLFKE---SKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       196 ~~~~~~Y~aSKa----al~~l~~~la~e---~~~~gI~v~~v~PG~v~T~  238 (368)
                      ......|--...    .+..+++.+-.+   ....|+||..++-|.|..+
T Consensus       117 ~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~  166 (297)
T COG1090         117 HSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP  166 (297)
T ss_pred             CCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence            444333332222    233444443332   2346899999999999764

>PLN00016 RNA-binding protein; Provisional

Probab=98.72  E-value=1.8e-07  Score=90.86  Aligned_cols=148  Identities=18%  Similarity=0.187  Sum_probs=93.5

Q ss_pred             CCCCeEEEE----cCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-------HHHHHHhhhhhhhcCCCCcccccCc
Q 017635           31 AGPRNVVIT----GSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV-------TELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        31 ~~~k~vlIT----Gas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      ...++|+||    ||+|.||..++++|+++|++|++++|+.+......       .++.                   ..
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-------------------~~  110 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-------------------SA  110 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-------------------hc
Confidence            345789999    99999999999999999999999999875432211       1111                   12


Q ss_pred             eeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       100 ~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      .+.++.+|+.|   +.+++.     ...+|+|||+++..          .+           +    ++.++..+++. +
T Consensus       111 ~v~~v~~D~~d---~~~~~~-----~~~~d~Vi~~~~~~----------~~-----------~----~~~ll~aa~~~-g  156 (378)
T PLN00016        111 GVKTVWGDPAD---VKSKVA-----GAGFDVVYDNNGKD----------LD-----------E----VEPVADWAKSP-G  156 (378)
T ss_pred             CceEEEecHHH---HHhhhc-----cCCccEEEeCCCCC----------HH-----------H----HHHHHHHHHHc-C
Confidence            36778888876   333321     13689999987631          11           1    22334444444 4


Q ss_pred             CcEEEEEcCCCCCCCC--CCC-----chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          180 GGHIFNMDGAGSGGSS--TPL-----TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~--~~~-----~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      -.++|++||.+.....  .|.     ...+. +|...+.+.+       ..++.+..++|+.+-.+.
T Consensus       157 vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~  215 (378)
T PLN00016        157 LKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPG  215 (378)
T ss_pred             CCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCC
Confidence            5689999986332111  110     01122 7887776543       247899999999887653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.70  E-value=1.2e-07  Score=94.18  Aligned_cols=129  Identities=13%  Similarity=0.073  Sum_probs=88.4

Q ss_pred             CCeEE----EEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           33 PRNVV----ITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        33 ~k~vl----ITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |..++    |+||++|+|.++++.|...|++|+.+.+...+..                                     
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~-------------------------------------   76 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA-------------------------------------   76 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccc-------------------------------------
Confidence            45666    8899999999999999999999998766443110                                     


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                                   ..+..+++.++.-+-..        .+.+++.        +.+.+++..++.|.   .+|+||+++|
T Consensus        77 -------------~~~~~~~~~~~~d~~~~--------~~~~~l~--------~~~~~~~~~l~~l~---~~griv~i~s  124 (450)
T PRK08261         77 -------------AGWGDRFGALVFDATGI--------TDPADLK--------ALYEFFHPVLRSLA---PCGRVVVLGR  124 (450)
T ss_pred             -------------cCcCCcccEEEEECCCC--------CCHHHHH--------HHHHHHHHHHHhcc---CCCEEEEEcc
Confidence                         00011344333322111        1122222        33456777777775   3589999987


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  235 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v  235 (368)
                      .. ..   .....|+++|+++.+|++++++|+ ++|++++.|.|++.
T Consensus       125 ~~-~~---~~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~~  166 (450)
T PRK08261        125 PP-EA---AADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAPG  166 (450)
T ss_pred             cc-cc---CCchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCCC
Confidence            63 32   234579999999999999999999 77999999999863

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.69  E-value=2.7e-07  Score=83.15  Aligned_cols=166  Identities=18%  Similarity=0.190  Sum_probs=113.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ....+++++||||+|.||.++|++|..+|+.|++.+--...-........                  ....++.+..|+
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~------------------~~~~fel~~hdv   84 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWI------------------GHPNFELIRHDV   84 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhc------------------cCcceeEEEeec
Confidence            35678999999999999999999999999999998864333222111111                  234566666677


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ..+     ++.       .+|.++|-|....|.. + ..+   --+++.+|+++++++...+...      +.+++..|+
T Consensus        85 ~~p-----l~~-------evD~IyhLAapasp~~-y-~~n---pvktIktN~igtln~lglakrv------~aR~l~aST  141 (350)
T KOG1429|consen   85 VEP-----LLK-------EVDQIYHLAAPASPPH-Y-KYN---PVKTIKTNVIGTLNMLGLAKRV------GARFLLAST  141 (350)
T ss_pred             hhH-----HHH-------HhhhhhhhccCCCCcc-c-ccC---ccceeeecchhhHHHHHHHHHh------CceEEEeec
Confidence            655     333       3688999998766321 1 112   2567889999999998877543      468888877


Q ss_pred             CCCCCCC---------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGGSS---------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~~~---------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      +.....+               ....+.|...|.+.+.|+....++.   ||.|....+-.+--|
T Consensus       142 seVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~---giE~rIaRifNtyGP  203 (350)
T KOG1429|consen  142 SEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE---GIEVRIARIFNTYGP  203 (350)
T ss_pred             ccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhccc---CcEEEEEeeecccCC
Confidence            5332221               1234789999999999999887664   677766666544444

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.68  E-value=1.3e-07  Score=88.40  Aligned_cols=84  Identities=14%  Similarity=0.242  Sum_probs=64.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCCh---HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ++++|+++|||| ||+|++++..|++.|++ |++++|+.   ++.+++.+++.+.                 ...+....
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-----------------~~~~~~~~  184 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-----------------VPECIVNV  184 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-----------------CCCceeEE
Confidence            467899999999 69999999999999986 99999997   6666666666431                 23345567


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      +|+++.+++++.++       ..|+||||....
T Consensus       185 ~d~~~~~~~~~~~~-------~~DilINaTp~G  210 (289)
T PRK12548        185 YDLNDTEKLKAEIA-------SSDILVNATLVG  210 (289)
T ss_pred             echhhhhHHHhhhc-------cCCEEEEeCCCC
Confidence            88888777765443       469999998654

>PRK12320 hypothetical protein; Provisional

Probab=98.67  E-value=2.2e-07  Score=95.66  Aligned_cols=134  Identities=16%  Similarity=0.280  Sum_probs=90.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|.||.+++++|+++|++|++++|+....                          ....+.++.+|++|.. +
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------------------------~~~~ve~v~~Dl~d~~-l   54 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------------------------LDPRVDYVCASLRNPV-L   54 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------------------------ccCCceEEEccCCCHH-H
Confidence            599999999999999999999999999999864321                          1135778999999973 4


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .+++       .++|++||+|+... .      .      ..++|+.|+.++++++.    +.  +.++|++||. .+  
T Consensus        55 ~~al-------~~~D~VIHLAa~~~-~------~------~~~vNv~Gt~nLleAA~----~~--GvRiV~~SS~-~G--  105 (699)
T PRK12320         55 QELA-------GEADAVIHLAPVDT-S------A------PGGVGITGLAHVANAAA----RA--GARLLFVSQA-AG--  105 (699)
T ss_pred             HHHh-------cCCCEEEEcCccCc-c------c------hhhHHHHHHHHHHHHHH----Hc--CCeEEEEECC-CC--
Confidence            3332       25899999998632 1      1      11478999998877763    23  3479998865 22  


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                       .+  ..|.    ..+.+.    ..   .++.+..+.|+.+-.+
T Consensus       106 -~~--~~~~----~aE~ll----~~---~~~p~~ILR~~nVYGp  135 (699)
T PRK12320        106 -RP--ELYR----QAETLV----ST---GWAPSLVIRIAPPVGR  135 (699)
T ss_pred             -CC--cccc----HHHHHH----Hh---cCCCEEEEeCceecCC
Confidence             11  1232    122222    22   2467788888777665

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.62  E-value=2.1e-07  Score=96.92  Aligned_cols=165  Identities=17%  Similarity=0.215  Sum_probs=132.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH---HHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM---TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..|.++|+||-||.|+++|+.|..+|++ +++++|+.-+.--   .+...+.                 .+.++.+-..|
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~-----------------~GVqV~vsT~n 1829 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRR-----------------RGVQVQVSTSN 1829 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHh-----------------cCeEEEEeccc
Confidence            4589999999999999999999999985 8889998544221   2223332                 56778888889


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++..+..++++++. .+.+.+..++|-|.+.. ...+++.++++|++.-+-.+.|++++-+.-.....   .-..+|.+|
T Consensus      1830 itt~~ga~~Li~~s-~kl~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~---~LdyFv~FS 1904 (2376)
T KOG1202|consen 1830 ITTAEGARGLIEES-NKLGPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP---ELDYFVVFS 1904 (2376)
T ss_pred             chhhhhHHHHHHHh-hhcccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCc---ccceEEEEE
Confidence            99999999998876 45689999999999887 68899999999999999999999998766554433   234677788


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE  219 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e  219 (368)
                      |. +...+..++..|+-+.++++.+++.-+.+
T Consensus      1905 Sv-scGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1905 SV-SCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ee-cccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            87 56678889999999999999999865544

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.58  E-value=6.2e-07  Score=78.82  Aligned_cols=84  Identities=18%  Similarity=0.189  Sum_probs=66.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++++++|+||+|++|+++++.|+++|++|++++|+.+++++..+++.+.                .  ......+|.
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~----------------~--~~~~~~~~~   85 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR----------------F--GEGVGAVET   85 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh----------------c--CCcEEEeeC
Confidence            3678999999999999999999999999999999999998888777766432                1  223456788


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .+.+++.+.++       +.|++|++...
T Consensus        86 ~~~~~~~~~~~-------~~diVi~at~~  107 (194)
T cd01078          86 SDDAARAAAIK-------GADVVFAAGAA  107 (194)
T ss_pred             CCHHHHHHHHh-------cCCEEEECCCC
Confidence            88888776654       57988886654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.57  E-value=2.4e-07  Score=83.57  Aligned_cols=100  Identities=21%  Similarity=0.275  Sum_probs=68.9

Q ss_pred             CeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~G-IG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .+-.||+.|+| ||+++|++|+++|++|++++|+....        ..                ....+.++.++  +  
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~----------------~~~~v~~i~v~--s--   67 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE----------------PHPNLSIIEIE--N--   67 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC----------------CCCCeEEEEEe--c--
Confidence            36678877665 99999999999999999998764210        00                01234444432  2  


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHH
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS  163 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~  163 (368)
                       .+.+.+.+.+.++.+|++|||||+.. +.+....+.+++.+++++|.+..
T Consensus        68 -~~~m~~~l~~~~~~~DivIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         68 -VDDLLETLEPLVKDHDVLIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             -HHHHHHHHHHHhcCCCEEEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence             23333333444567999999999976 67777788899999999877654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.56  E-value=2.5e-07  Score=89.50  Aligned_cols=110  Identities=22%  Similarity=0.243  Sum_probs=74.5

Q ss_pred             CCCCCeEEEEcC---------------CCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCc
Q 017635           30 KAGPRNVVITGS---------------TRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        30 ~~~~k~vlITGa---------------s~G-IG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      +++||+++||||               |+| +|.++|++|+.+|++|++++++....                       
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-----------------------  238 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-----------------------  238 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-----------------------
Confidence            478999999999               667 99999999999999999988764321                       


Q ss_pred             ccccCceeEEEeccCCCHHHH-HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCH--HHHHHHHHhhchHHHHHHHHH
Q 017635           94 KNLVHAKVAGIACDVCEPADV-QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN--EEIEQIVSTNLVGSILCTREA  170 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v-~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~--~~~~~~~~vN~~g~~~l~~~~  170 (368)
                         ....  ...+|+++.+++ +++.++   .++++|++|+|||+.. +.+....+.  +..+..+.+|+.-.--+++.+
T Consensus       239 ---~~~~--~~~~~v~~~~~~~~~~~~~---~~~~~D~~i~~Aavsd-~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l  309 (390)
T TIGR00521       239 ---TPPG--VKSIKVSTAEEMLEAALNE---LAKDFDIFISAAAVAD-FKPKTVFEGKIKKQGEELSLKLVKNPDIIAEV  309 (390)
T ss_pred             ---CCCC--cEEEEeccHHHHHHHHHHh---hcccCCEEEEcccccc-ccccccccccccccCCceeEEEEeCcHHHHHH
Confidence               0111  246799999888 555544   3468999999999976 555432211  111123456666665555544


Q ss_pred             H
Q 017635          171 M  171 (368)
Q Consensus       171 l  171 (368)
                      .
T Consensus       310 ~  310 (390)
T TIGR00521       310 R  310 (390)
T ss_pred             H
Confidence            3

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.55  E-value=3.6e-06  Score=75.98  Aligned_cols=145  Identities=16%  Similarity=0.220  Sum_probs=91.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |+||||+|.+|+.+++.|++.+++|.++.|+..+  +..+++++                   ..++++.+|+.|.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~-------------------~g~~vv~~d~~~~~~l~   59 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQA-------------------LGAEVVEADYDDPESLV   59 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHH-------------------TTTEEEES-TT-HHHHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhc-------------------ccceEeecccCCHHHHH
Confidence            6899999999999999999999999999999743  22334433                   23456799999999988


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS  195 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~  195 (368)
                      ++++       .+|.++++.+...      +..           ......+++++...     +-.++|. ||.+.....
T Consensus        60 ~al~-------g~d~v~~~~~~~~------~~~-----------~~~~~~li~Aa~~a-----gVk~~v~-ss~~~~~~~  109 (233)
T PF05368_consen   60 AALK-------GVDAVFSVTPPSH------PSE-----------LEQQKNLIDAAKAA-----GVKHFVP-SSFGADYDE  109 (233)
T ss_dssp             HHHT-------TCSEEEEESSCSC------CCH-----------HHHHHHHHHHHHHH-----T-SEEEE-SEESSGTTT
T ss_pred             HHHc-------CCceEEeecCcch------hhh-----------hhhhhhHHHhhhcc-----ccceEEE-EEecccccc
Confidence            8775       7899998877532      111           11223344444332     3556764 444333311


Q ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          196 ----TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       196 ----~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                          .|....| ..|..++.+.+..       |+....|+||+....+
T Consensus       110 ~~~~~p~~~~~-~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~  149 (233)
T PF05368_consen  110 SSGSEPEIPHF-DQKAEIEEYLRES-------GIPYTIIRPGFFMENL  149 (233)
T ss_dssp             TTTSTTHHHHH-HHHHHHHHHHHHC-------TSEBEEEEE-EEHHHH
T ss_pred             cccccccchhh-hhhhhhhhhhhhc-------cccceeccccchhhhh
Confidence                1222233 4677666555433       7999999999775443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.53  E-value=5.5e-07  Score=81.24  Aligned_cols=174  Identities=15%  Similarity=0.056  Sum_probs=119.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+.|.++||||.+.||...+..+...-  ++.+.++.-.- .-.+.+++..                  ...+..+++.|
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~------------------n~p~ykfv~~d   65 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR------------------NSPNYKFVEGD   65 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc------------------cCCCceEeecc
Confidence            345899999999999999999998753  55555443110 0011122221                  23578889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +.+...+..++..     .++|.|+|-|.....     +.+--+--...+.|++++..|++...-..    +-.++|.+|
T Consensus        66 i~~~~~~~~~~~~-----~~id~vihfaa~t~v-----d~s~~~~~~~~~nnil~t~~Lle~~~~sg----~i~~fvhvS  131 (331)
T KOG0747|consen   66 IADADLVLYLFET-----EEIDTVIHFAAQTHV-----DRSFGDSFEFTKNNILSTHVLLEAVRVSG----NIRRFVHVS  131 (331)
T ss_pred             ccchHHHHhhhcc-----CchhhhhhhHhhhhh-----hhhcCchHHHhcCCchhhhhHHHHHHhcc----CeeEEEEec
Confidence            9999888777653     489999999986542     12222234567889999999988775542    455789998


Q ss_pred             CCCCCC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          188 GAGSGG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       188 S~~~~~-----------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      +.....           ....+...|++||+|.+++.+++.+.+   |+.|..++-+.|--|-
T Consensus       132 TdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~  191 (331)
T KOG0747|consen  132 TDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPN  191 (331)
T ss_pred             ccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCC
Confidence            742111           011234689999999999999999887   6888888877776653

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.45  E-value=2.5e-06  Score=83.31  Aligned_cols=127  Identities=25%  Similarity=0.370  Sum_probs=86.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChH--HHH---------HHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSE--SVR---------MTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G---~~Vil~~R~~~--~~~---------~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      +++|+++||||+|.+|+-+.++|++.-   -++.+.-|...  ..+         .+.+++++..++             
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~-------------   76 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPE-------------   76 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCcc-------------
Confidence            578999999999999999999999864   26777766421  111         112222222111             


Q ss_pred             cCceeEEEeccCCCHH------HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHH
Q 017635           97 VHAKVAGIACDVCEPA------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREA  170 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  170 (368)
                      .-.++..+..|+++++      +.+.+.       ..+|++||+|+... +       .|.++..+.+|+.|+.++.+.+
T Consensus        77 ~l~Kv~pi~GDi~~~~LGis~~D~~~l~-------~eV~ivih~AAtvr-F-------de~l~~al~iNt~Gt~~~l~la  141 (467)
T KOG1221|consen   77 ALEKVVPIAGDISEPDLGISESDLRTLA-------DEVNIVIHSAATVR-F-------DEPLDVALGINTRGTRNVLQLA  141 (467)
T ss_pred             ceecceeccccccCcccCCChHHHHHHH-------hcCCEEEEeeeeec-c-------chhhhhhhhhhhHhHHHHHHHH
Confidence            2357788888988654      333222       26999999999754 1       2457888999999999999988


Q ss_pred             HHHHHcCCCCcEEEEEcCC
Q 017635          171 MRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       171 lp~m~~~~~~g~Iv~isS~  189 (368)
                      .....    -...+.+|++
T Consensus       142 k~~~~----l~~~vhVSTA  156 (467)
T KOG1221|consen  142 KEMVK----LKALVHVSTA  156 (467)
T ss_pred             HHhhh----hheEEEeehh
Confidence            66543    3457777654

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.26  E-value=4.3e-05  Score=69.24  Aligned_cols=213  Identities=14%  Similarity=0.115  Sum_probs=133.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+.+|-++-|.||+|.+|+-++.+|++.|-+|++-.|-.+.--   .+++--               -.-+++.++..|+
T Consensus        57 sS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~---r~lkvm---------------GdLGQvl~~~fd~  118 (391)
T KOG2865|consen   57 SSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP---RHLKVM---------------GDLGQVLFMKFDL  118 (391)
T ss_pred             ccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch---hheeec---------------ccccceeeeccCC
Confidence            3567778999999999999999999999999999988654321   111100               0126899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      .|+++++++++.       -++|||--|--.+.   ...+-      -++|+.++-.+++.+-..     +--+.|.+|+
T Consensus       119 ~DedSIr~vvk~-------sNVVINLIGrd~eT---knf~f------~Dvn~~~aerlAricke~-----GVerfIhvS~  177 (391)
T KOG2865|consen  119 RDEDSIRAVVKH-------SNVVINLIGRDYET---KNFSF------EDVNVHIAERLARICKEA-----GVERFIHVSC  177 (391)
T ss_pred             CCHHHHHHHHHh-------CcEEEEeecccccc---CCccc------ccccchHHHHHHHHHHhh-----Chhheeehhh
Confidence            999999999874       58999998864321   22222      357777777776665332     4457899987


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc---cccCcccchh-----------hhhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQNK-----------QMFNI  254 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~---~~~~~~~~~~-----------~~~~~  254 (368)
                      .++.   ....+-|=-||++-+--++   .++.    ....|.|.-|--..   .+.......+           +..+.
T Consensus       178 Lgan---v~s~Sr~LrsK~~gE~aVr---dafP----eAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~  247 (391)
T KOG2865|consen  178 LGAN---VKSPSRMLRSKAAGEEAVR---DAFP----EATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQ  247 (391)
T ss_pred             cccc---ccChHHHHHhhhhhHHHHH---hhCC----cceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeec
Confidence            6432   3344556677776654333   3343    23456665442211   1000000000           00000


Q ss_pred             hcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHH
Q 017635          255 ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLA  291 (368)
Q Consensus       255 ~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~  291 (368)
                       ..-.-++|..++.++..|+..++...|..|+...+.
T Consensus       248 -PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~~yql~  283 (391)
T KOG2865|consen  248 -PVYVVDVAAAIVNAVKDPDSMGKTYEFVGPDRYQLS  283 (391)
T ss_pred             -cEEEehHHHHHHHhccCccccCceeeecCCchhhHH
Confidence             012456788999999999888888888888765443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.19  E-value=9.5e-06  Score=77.87  Aligned_cols=77  Identities=23%  Similarity=0.360  Sum_probs=65.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +.+||.|| |++|+.+|+.|+++| .+|.+++|+.++.+++....                    ..++.+.++|+.|.+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~--------------------~~~v~~~~vD~~d~~   60 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI--------------------GGKVEALQVDAADVD   60 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc--------------------cccceeEEecccChH
Confidence            67999998 999999999999999 89999999999887665442                    247889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      .+.+++++       .|++||++...
T Consensus        61 al~~li~~-------~d~VIn~~p~~   79 (389)
T COG1748          61 ALVALIKD-------FDLVINAAPPF   79 (389)
T ss_pred             HHHHHHhc-------CCEEEEeCCch
Confidence            88887763       39999998754

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.16  E-value=2.7e-05  Score=75.00  Aligned_cols=176  Identities=18%  Similarity=0.154  Sum_probs=105.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..+.+..+|+|+||+|++|+-+++.|.++|+.|..+.|+.++.+.... +..                 .......+..|
T Consensus        74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~-----------------~d~~~~~v~~~  135 (411)
T KOG1203|consen   74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFF-----------------VDLGLQNVEAD  135 (411)
T ss_pred             CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccc-----------------cccccceeeec
Confidence            345677899999999999999999999999999999999888766554 100                 11233344555


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      .....++...+.+...  -...+++.++|..+..    +    +...-..+.+.|..++++++...     +-.|++.++
T Consensus       136 ~~~~~d~~~~~~~~~~--~~~~~v~~~~ggrp~~----e----d~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~  200 (411)
T KOG1203|consen  136 VVTAIDILKKLVEAVP--KGVVIVIKGAGGRPEE----E----DIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVG  200 (411)
T ss_pred             cccccchhhhhhhhcc--ccceeEEecccCCCCc----c----cCCCcceecHHHHHHHHHHHHHh-----CCceEEEEE
Confidence            5544443332222111  1256777777754311    1    12222345567788887777332     456899998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHH-HHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQ-ASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~-~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      +.+......+.+..+.   .+...-. +...+++...|+.-..|.||....+.
T Consensus       201 si~~~~~~~~~~~~~~---~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  201 SIGGTKFNQPPNILLL---NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             eecCcccCCCchhhhh---hhhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            8743333333333331   1111111 23334455678888999999776543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.14  E-value=1e-05  Score=80.47  Aligned_cols=78  Identities=18%  Similarity=0.289  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++.+++. +.+++..+++.+                   ..+.++..|.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-------------------~~~~~~~~~~   61 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-------------------LGIELVLGEY   61 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-------------------cCCEEEeCCc
Confidence            56889999999887 99999999999999999999985 444444444432                   1345677777


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                      .+            +..+++|+||+++|...
T Consensus        62 ~~------------~~~~~~d~vv~~~g~~~   80 (450)
T PRK14106         62 PE------------EFLEGVDLVVVSPGVPL   80 (450)
T ss_pred             ch------------hHhhcCCEEEECCCCCC
Confidence            76            11257899999999743

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.09  E-value=8.5e-05  Score=68.27  Aligned_cols=131  Identities=18%  Similarity=0.197  Sum_probs=89.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      .++||||||.+|.+++++|.++|++|.+..|+.++.....                        ..+.+...|+.+++++
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------------------------~~v~~~~~d~~~~~~l   57 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------------------------GGVEVVLGDLRDPKSL   57 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------------------------CCcEEEEeccCCHhHH
Confidence            6899999999999999999999999999999998875432                        3577889999999998


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      ...++       .+|.+++..+... ...          ..............+..-      ....+++.+|... .. 
T Consensus        58 ~~a~~-------G~~~~~~i~~~~~-~~~----------~~~~~~~~~~~~~a~~a~------~~~~~~~~~s~~~-~~-  111 (275)
T COG0702          58 VAGAK-------GVDGVLLISGLLD-GSD----------AFRAVQVTAVVRAAEAAG------AGVKHGVSLSVLG-AD-  111 (275)
T ss_pred             HHHhc-------cccEEEEEecccc-ccc----------chhHHHHHHHHHHHHHhc------CCceEEEEeccCC-CC-
Confidence            87765       6788888777542 111          011112223333333321      1245666665542 21 


Q ss_pred             CCCCchhhHHHHHHHHHHHHHH
Q 017635          195 STPLTAVYGSTKCGLRQLQASL  216 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~l  216 (368)
                       ......|..+|...+...++.
T Consensus       112 -~~~~~~~~~~~~~~e~~l~~s  132 (275)
T COG0702         112 -AASPSALARAKAAVEAALRSS  132 (275)
T ss_pred             -CCCccHHHHHHHHHHHHHHhc
Confidence             134468999999888777654

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.06  E-value=7.3e-06  Score=67.66  Aligned_cols=47  Identities=19%  Similarity=0.401  Sum_probs=43.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~~~~~l   77 (368)
                      ++++|+++|.|+ ||.|++++..|+++|++ |.++.|+.++++++.+++
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~   56 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF   56 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc
Confidence            678999999997 89999999999999986 999999999988887776

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.04  E-value=2.1e-05  Score=76.72  Aligned_cols=76  Identities=29%  Similarity=0.463  Sum_probs=59.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+|.|+ |.+|+.+++.|++++.  +|++++|+.+++++..+++                   ...++..+++|+.|.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-------------------~~~~~~~~~~d~~~~~~   60 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-------------------LGDRVEAVQVDVNDPES   60 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---------------------TTTTEEEEE--TTTHHH
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-------------------cccceeEEEEecCCHHH
Confidence            689999 9999999999999874  8999999999988777654                   13578999999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      ++++++       +.|++||++|..
T Consensus        61 l~~~~~-------~~dvVin~~gp~   78 (386)
T PF03435_consen   61 LAELLR-------GCDVVINCAGPF   78 (386)
T ss_dssp             HHHHHT-------TSSEEEE-SSGG
T ss_pred             HHHHHh-------cCCEEEECCccc
Confidence            888765       459999999853

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK09620 hypothetical protein; Provisional

Probab=97.98  E-value=1.3e-05  Score=72.08  Aligned_cols=36  Identities=22%  Similarity=0.378  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           31 AGPRNVVITGST----------------RGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        31 ~~~k~vlITGas----------------~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      ++||+||||+|.                |-+|.++|++|+++|++|+++++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            478999999886                899999999999999999988764

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.95  E-value=0.00067  Score=57.86  Aligned_cols=187  Identities=16%  Similarity=0.148  Sum_probs=112.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      .+.|.||||-.|..++++..++|+.|..+.|++.++.+.                         ..+..++.|+.|++++
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------------------------~~~~i~q~Difd~~~~   56 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------------------------QGVTILQKDIFDLTSL   56 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------------------------ccceeecccccChhhh
Confidence            578899999999999999999999999999999886432                         2456789999999988


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .+.+.       ..|+||..-|...+       +.+  ....        .-.+.+...++.. +..|++.+.+.++-..
T Consensus        57 a~~l~-------g~DaVIsA~~~~~~-------~~~--~~~~--------k~~~~li~~l~~a-gv~RllVVGGAGSL~i  111 (211)
T COG2910          57 ASDLA-------GHDAVISAFGAGAS-------DND--ELHS--------KSIEALIEALKGA-GVPRLLVVGGAGSLEI  111 (211)
T ss_pred             Hhhhc-------CCceEEEeccCCCC-------Chh--HHHH--------HHHHHHHHHHhhc-CCeeEEEEcCccceEE
Confidence            65543       68999988776421       111  1111        1134445555544 5678888877643211


Q ss_pred             -------CCCCc-hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhh-h----hhhhcCCHHH
Q 017635          195 -------STPLT-AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-M----FNIICELPET  261 (368)
Q Consensus       195 -------~~~~~-~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~----~~~~~~~pe~  261 (368)
                             -.|.+ ..|-..-.+.--+.+.|+.+   ..+...-++|...-.|.-+.+.....+. +    .+.-..+-++
T Consensus       112 d~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~ll~n~~G~SrIS~aD  188 (211)
T COG2910         112 DEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQLLVNAKGESRISYAD  188 (211)
T ss_pred             cCCceeecCCCCchhHHHHHHHHHHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccceEEEcCCCceeeeHHH
Confidence                   11222 23433333333344555554   3488888999876666333222111110 0    0111125677


Q ss_pred             HHHHhhhhhhhcc
Q 017635          262 VARTLVPRIRVVK  274 (368)
Q Consensus       262 ~a~~~~~~~~~~~  274 (368)
                      .|-.+++.+..|+
T Consensus       189 YAiA~lDe~E~~~  201 (211)
T COG2910         189 YAIAVLDELEKPQ  201 (211)
T ss_pred             HHHHHHHHHhccc
Confidence            7777776665443

>PLN00106 malate dehydrogenase

Probab=97.94  E-value=5.2e-05  Score=71.75  Aligned_cols=151  Identities=9%  Similarity=0.085  Sum_probs=92.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|+|||++|.+|..++..|+.++  .+++++++++  .+....+|...                 ....  ...|++
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~-----------------~~~~--~i~~~~   75 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHI-----------------NTPA--QVRGFL   75 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhC-----------------CcCc--eEEEEe
Confidence            35789999999999999999999776  4799999977  22112233220                 1111  222433


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +.+++.+.+       ...|++|+.||...  .+  .   +.++..+..|+.....+.+.    +.+....+.++++|-.
T Consensus        76 ~~~d~~~~l-------~~aDiVVitAG~~~--~~--g---~~R~dll~~N~~i~~~i~~~----i~~~~p~aivivvSNP  137 (323)
T PLN00106         76 GDDQLGDAL-------KGADLVIIPAGVPR--KP--G---MTRDDLFNINAGIVKTLCEA----VAKHCPNALVNIISNP  137 (323)
T ss_pred             CCCCHHHHc-------CCCCEEEEeCCCCC--CC--C---CCHHHHHHHHHHHHHHHHHH----HHHHCCCeEEEEeCCC
Confidence            333333322       36899999999854  21  1   23566788888776555444    4444334445554433


Q ss_pred             CC-----------CCCCCCCchhhHHHHHHHHHHHHHHHHHhC
Q 017635          190 GS-----------GGSSTPLTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       190 ~~-----------~~~~~~~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      .-           ...+.|..-.|+.++.-...|-..+++++.
T Consensus       138 vD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        138 VNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             ccccHHHHHHHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence            11           113355667899888666778888888875

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.87  E-value=7.9e-05  Score=70.68  Aligned_cols=48  Identities=23%  Similarity=0.383  Sum_probs=40.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLS-G-DRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~-G-~~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++++|+|+||||+|.||..+|++|+++ | .++++++|+.+++.+..+++
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el  201 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAEL  201 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            688999999999999999999999865 5 58999999988777655443

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.85  E-value=5.4e-05  Score=70.57  Aligned_cols=85  Identities=20%  Similarity=0.318  Sum_probs=70.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHH----CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLL----SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~----~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      -++|-||||.-|.-+++++.+    .|..+.+++||++++++.++++.+..+..            ....+ .+.||.+|
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~------------ls~~~-i~i~D~~n   73 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTD------------LSSSV-ILIADSAN   73 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCC------------cccce-EEEecCCC
Confidence            589999999999999999999    78899999999999999998886643211            12234 78999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                      ++++.+++.+       -.+++||+|...
T Consensus        74 ~~Sl~emak~-------~~vivN~vGPyR   95 (423)
T KOG2733|consen   74 EASLDEMAKQ-------ARVIVNCVGPYR   95 (423)
T ss_pred             HHHHHHHHhh-------hEEEEeccccce
Confidence            9999999875       488999999643

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.82  E-value=0.00012  Score=64.64  Aligned_cols=161  Identities=19%  Similarity=0.231  Sum_probs=103.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-C-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLS-G-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~-G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      -+..+|||||+-|-+|..+|..|-.+ | ..|++.+-......     ..                    ..--++-.|+
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~--------------------~~GPyIy~DI   96 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VT--------------------DVGPYIYLDI   96 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hc--------------------ccCCchhhhh
Confidence            34568999999999999999988765 5 35776554322110     00                    0112456788


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      -|..++++++-.     .+||.+||-.+...      ...+.+.-...++|..|..++++.+..+      +-+++.=|.
T Consensus        97 LD~K~L~eIVVn-----~RIdWL~HfSALLS------AvGE~NVpLA~~VNI~GvHNil~vAa~~------kL~iFVPST  159 (366)
T KOG2774|consen   97 LDQKSLEEIVVN-----KRIDWLVHFSALLS------AVGETNVPLALQVNIRGVHNILQVAAKH------KLKVFVPST  159 (366)
T ss_pred             hccccHHHhhcc-----cccceeeeHHHHHH------HhcccCCceeeeecchhhhHHHHHHHHc------CeeEeeccc
Confidence            888888877532     38999999776532      1222334456789999999998877654      345555555


Q ss_pred             CCCCCC-----CCC------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEE-ecCccc
Q 017635          189 AGSGGS-----STP------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA-SPGMVL  236 (368)
Q Consensus       189 ~~~~~~-----~~~------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v-~PG~v~  236 (368)
                      +++...     +.|      ....|+.||.-.+.+-+.+...+   |+.+.++ -||.+.
T Consensus       160 IGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is  216 (366)
T KOG2774|consen  160 IGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIIS  216 (366)
T ss_pred             ccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccc
Confidence            543221     112      23579999998888888877665   4555444 355554

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.76  E-value=0.00015  Score=68.46  Aligned_cols=148  Identities=12%  Similarity=0.087  Sum_probs=88.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++.++|.|||++|.+|..++..|+.++  .++++++++.  .+....++...                 ..  .....+.
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~-----------------~~--~~~v~~~   64 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHI-----------------DT--PAKVTGY   64 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchhhc-----------------Cc--CceEEEe
Confidence            466799999999999999999999666  5899999932  22222233321                 11  1223355


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+.+..+.+       ...|++|++||...  .+  .   +.....+..|+...-.+.+    .|++. +..++|+++|
T Consensus        65 td~~~~~~~l-------~gaDvVVitaG~~~--~~--~---~tR~dll~~N~~i~~~i~~----~i~~~-~~~~iviv~S  125 (321)
T PTZ00325         65 ADGELWEKAL-------RGADLVLICAGVPR--KP--G---MTRDDLFNTNAPIVRDLVA----AVASS-APKAIVGIVS  125 (321)
T ss_pred             cCCCchHHHh-------CCCCEEEECCCCCC--CC--C---CCHHHHHHHHHHHHHHHHH----HHHHH-CCCeEEEEec
Confidence            5543322222       36899999999753  21  1   2356678888876666644    45544 4456777766


Q ss_pred             CCC------------CCCCCCCchhhHHHHHHHH--HHHHHHHHHh
Q 017635          189 AGS------------GGSSTPLTAVYGSTKCGLR--QLQASLFKES  220 (368)
Q Consensus       189 ~~~------------~~~~~~~~~~Y~aSKaal~--~l~~~la~e~  220 (368)
                      ...            ...+.|..-.|+.+  .|+  .|-..+++.+
T Consensus       126 NPvdv~~~~~~~~~~~~sg~p~~~viG~g--~LDs~R~r~~la~~l  169 (321)
T PTZ00325        126 NPVNSTVPIAAETLKKAGVYDPRKLFGVT--TLDVVRARKFVAEAL  169 (321)
T ss_pred             CcHHHHHHHHHhhhhhccCCChhheeech--hHHHHHHHHHHHHHh
Confidence            321            12334556678876  254  3455566665

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.73  E-value=0.00033  Score=65.51  Aligned_cols=139  Identities=14%  Similarity=0.185  Sum_probs=83.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++++++|+|+++++|.++++.+...|++|++++++.++.+.+ .++                    +.+   ..+|..+.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~~~  199 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA--------------------GAD---AVFNYRAE  199 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCC---EEEeCCCc
Confidence            578999999999999999999999999999999987765443 211                    111   12345554


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +..+.+.+.. . ...+|++++++|...            .+..               ...+.   ..|+++++++...
T Consensus       200 ~~~~~~~~~~-~-~~~~d~vi~~~~~~~------------~~~~---------------~~~l~---~~g~~v~~~~~~~  247 (325)
T cd08253         200 DLADRILAAT-A-GQGVDVIIEVLANVN------------LAKD---------------LDVLA---PGGRIVVYGSGGL  247 (325)
T ss_pred             CHHHHHHHHc-C-CCceEEEEECCchHH------------HHHH---------------HHhhC---CCCEEEEEeecCC
Confidence            4444443322 1 136999999987311            1111               11221   3588888865210


Q ss_pred             -----------CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeE
Q 017635          192 -----------GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG  226 (368)
Q Consensus       192 -----------~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~  226 (368)
                                 .....+....|..+|..+..+.+.+...+....++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         248 RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence                       00111222357777777777777776666544443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.69  E-value=0.00028  Score=59.70  Aligned_cols=159  Identities=14%  Similarity=0.128  Sum_probs=100.6

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +..++.++++.++|.||+|-.|..+.+++++.+  -+|+++.|++..-.+                        .+..+.
T Consensus        10 lrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a------------------------t~k~v~   65 (238)
T KOG4039|consen   10 LREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA------------------------TDKVVA   65 (238)
T ss_pred             HHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc------------------------ccceee
Confidence            344567788999999999999999999999998  489999987422111                        223455


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCC---CCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK---PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      -...|....++.....       -.+|+++++-|......   .+...+.|   .        .+.+++     |.+.++
T Consensus        66 q~~vDf~Kl~~~a~~~-------qg~dV~FcaLgTTRgkaGadgfykvDhD---y--------vl~~A~-----~AKe~G  122 (238)
T KOG4039|consen   66 QVEVDFSKLSQLATNE-------QGPDVLFCALGTTRGKAGADGFYKVDHD---Y--------VLQLAQ-----AAKEKG  122 (238)
T ss_pred             eEEechHHHHHHHhhh-------cCCceEEEeecccccccccCceEeechH---H--------HHHHHH-----HHHhCC
Confidence            5666776665543322       36999999998755211   12222221   1        111222     333335


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      -.+++.+||.++..   .....|--.|.-++.=+..|.-      =++....||++.-+-
T Consensus       123 ck~fvLvSS~GAd~---sSrFlY~k~KGEvE~~v~eL~F------~~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  123 CKTFVLVSSAGADP---SSRFLYMKMKGEVERDVIELDF------KHIIILRPGPLLGER  173 (238)
T ss_pred             CeEEEEEeccCCCc---ccceeeeeccchhhhhhhhccc------cEEEEecCcceeccc
Confidence            66899998874332   2345788888877765554432      267789999987554

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.68  E-value=0.00024  Score=70.66  Aligned_cols=49  Identities=22%  Similarity=0.198  Sum_probs=39.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      |++++|+++|||+++ +|.++|+.|+++|++|++.+++........+++.
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~   49 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL   49 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH
Confidence            457899999999986 9999999999999999999987654444444443

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.67  E-value=0.00086  Score=59.00  Aligned_cols=137  Identities=16%  Similarity=0.112  Sum_probs=84.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~---~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++++|||++|=.|.||.+.+...|.   +.++.+.                                      -.+|+++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------------------------------kd~DLt~   43 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------------------------------KDADLTN   43 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------------------------------ccccccc
Confidence            6899999999999999999998875   3333321                                      2569999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++..     ++..|||.|+...+.-.-...+.+-++..+++|    -++++.+..+     +-..++...|..
T Consensus        44 ~a~t~~lF~~e-----kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in----dNVlhsa~e~-----gv~K~vsclStC  109 (315)
T KOG1431|consen   44 LADTRALFESE-----KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN----DNVLHSAHEH-----GVKKVVSCLSTC  109 (315)
T ss_pred             hHHHHHHHhcc-----CCceeeehHhhhcchhhcCCCchHHHhhcceec----hhHHHHHHHh-----chhhhhhhccee
Confidence            99999999865     688999998765421111233444444433333    3344444332     111233322221


Q ss_pred             ---------------CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC
Q 017635          191 ---------------SGGSSTPLTAVYGSTKCGLRQLQASLFKESKR  222 (368)
Q Consensus       191 ---------------~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~  222 (368)
                                     ....+-|....|+-+|.-+.-..++++++++.
T Consensus       110 IfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~  156 (315)
T KOG1431|consen  110 IFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR  156 (315)
T ss_pred             ecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC
Confidence                           01112244567999997777777888888753

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.61  E-value=0.00041  Score=58.29  Aligned_cols=48  Identities=21%  Similarity=0.380  Sum_probs=41.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ++++++++|+|+ |++|.++++.|++.| .+|.+.+|+.++.++..+++.
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~   64 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG   64 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            467899999998 899999999999996 789999999888777666553

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.58  E-value=0.00023  Score=67.63  Aligned_cols=118  Identities=14%  Similarity=0.209  Sum_probs=67.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSG-------DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G-------~~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +-+|+||||+|.+|.+++..|+..+       .+|++.++++.  +++....++..                   .. ..
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d-------------------~~-~~   61 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD-------------------CA-FP   61 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh-------------------cc-cc
Confidence            3469999999999999999999855       48999999653  12211111111                   00 00


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGH  182 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~  182 (368)
                      ...|+....+..       +.+...|+||+.||...  .+  ..+.   .+.++.|+.    +.+...+.+.+.. ..+.
T Consensus        62 ~~~~~~~~~~~~-------~~l~~aDiVI~tAG~~~--~~--~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~i  123 (325)
T cd01336          62 LLKSVVATTDPE-------EAFKDVDVAILVGAMPR--KE--GMER---KDLLKANVK----IFKEQGEALDKYAKKNVK  123 (325)
T ss_pred             ccCCceecCCHH-------HHhCCCCEEEEeCCcCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeE
Confidence            111332222222       22246899999999854  11  2232   445666654    4455556665552 3666


Q ss_pred             EEEEcC
Q 017635          183 IFNMDG  188 (368)
Q Consensus       183 Iv~isS  188 (368)
                      ++++|.
T Consensus       124 iivvsN  129 (325)
T cd01336         124 VLVVGN  129 (325)
T ss_pred             EEEecC
Confidence            777653

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.57  E-value=0.00046  Score=63.88  Aligned_cols=47  Identities=21%  Similarity=0.345  Sum_probs=41.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      .++|+++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+++.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            46899999998 699999999999999999999999988887776654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=97.54  E-value=0.0001  Score=65.42  Aligned_cols=176  Identities=16%  Similarity=0.051  Sum_probs=111.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM-TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++||||-+|-=|.-+|+-|+.+|+.|..+-|+...... .++.|-.   +.         ....++.....-.|++|.
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~---nP---------~~h~~~~mkLHYgDmTDs   95 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYS---NP---------HTHNGASMKLHYGDMTDS   95 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhc---Cc---------hhcccceeEEeeccccch
Confidence            3599999999999999999999999999988776554332 2222221   10         001245677788999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ..+.++++.+     +++-+.|-|+... .+    .+-|-.+.+-++...|++.++.++...-...  +-++-.-|++..
T Consensus        96 s~L~k~I~~i-----kPtEiYnLaAQSH-Vk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSEl  163 (376)
T KOG1372|consen   96 SCLIKLISTI-----KPTEVYNLAAQSH-VK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSEL  163 (376)
T ss_pred             HHHHHHHhcc-----Cchhhhhhhhhcc-eE----EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhh
Confidence            9999999877     6788888887654 12    2222234455677889988877664432222  234444443211


Q ss_pred             C----------CCCCCCchhhHHHHHHHHHHHHHHHHH---hCCCCeEEEEEec
Q 017635          192 G----------GSSTPLTAVYGSTKCGLRQLQASLFKE---SKRSKVGVHTASP  232 (368)
Q Consensus       192 ~----------~~~~~~~~~Y~aSKaal~~l~~~la~e---~~~~gI~v~~v~P  232 (368)
                      .          ..|+.+.+.|+++|.+-.-++-..+..   ++-.||-+|.=+|
T Consensus       164 yGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  164 YGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             cccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence            1          123345679999998754443333332   3345777777666

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.52  E-value=0.00031  Score=61.02  Aligned_cols=81  Identities=26%  Similarity=0.293  Sum_probs=49.1

Q ss_pred             CCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcc
Q 017635           31 AGPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK   94 (368)
Q Consensus        31 ~~~k~vlITGa----------------s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   94 (368)
                      ++||+||||+|                ||-+|.++|++++.+|++|+++..... +.                       
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-----------------------   56 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP-----------------------   56 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-----------------------
Confidence            47889999986                457999999999999999999887632 11                       


Q ss_pred             cccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC
Q 017635           95 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP  143 (368)
Q Consensus        95 ~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~  143 (368)
                        ....+..+  ++.+.+++.+.+.+.   +..-|++|++|++.. +.+
T Consensus        57 --~p~~~~~i--~v~sa~em~~~~~~~---~~~~Di~I~aAAVsD-f~p   97 (185)
T PF04127_consen   57 --PPPGVKVI--RVESAEEMLEAVKEL---LPSADIIIMAAAVSD-FRP   97 (185)
T ss_dssp             ----TTEEEE--E-SSHHHHHHHHHHH---GGGGSEEEE-SB--S-EEE
T ss_pred             --ccccceEE--Eecchhhhhhhhccc---cCcceeEEEecchhh-eee
Confidence              11234333  455656655555443   444599999999876 444

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.45  E-value=0.00039  Score=70.41  Aligned_cols=48  Identities=31%  Similarity=0.398  Sum_probs=41.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++++|+++|+|+ ||+|++++..|+++|++|++++|+.++.+++.+++
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            3578899999999 59999999999999999999999988877665543

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.40  E-value=0.002  Score=60.84  Aligned_cols=80  Identities=20%  Similarity=0.321  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++++++|+|+++++|.++++.+...|++|++++++.++.+.+ .++                    +..   ...|..+.
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~--------------------~~~---~~~~~~~~  221 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL--------------------GAD---YVIDYRKE  221 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCC---eEEecCCh
Confidence            578999999999999999999999999999999988765432 111                    111   12366665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+.+....  +++|++++++|.
T Consensus       222 ~~~~~~~~~~~~--~~~d~~i~~~g~  245 (342)
T cd08266         222 DFVREVRELTGK--RGVDVVVEHVGA  245 (342)
T ss_pred             HHHHHHHHHhCC--CCCcEEEECCcH
Confidence            555555443322  369999999873

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.27  E-value=0.0052  Score=57.95  Aligned_cols=115  Identities=23%  Similarity=0.291  Sum_probs=74.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|.|.|+ |++|.++|..|+..|  .+|++++|++++.+....++.+....             .+.......   .+.
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~-------------~~~~~~i~~---~~~   63 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAF-------------LPSPVKIKA---GDY   63 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhc-------------cCCCeEEEc---CCH
Confidence            36888996 899999999999999  58999999999988888887653211             011222221   232


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ...|++|+++|...  ++  ..+.   ...++.|..    +.+...+.+.+....+.++++|
T Consensus        64 ~~l-----------~~aDIVIitag~~~--~~--g~~R---~dll~~N~~----i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          64 SDC-----------KDADIVVITAGAPQ--KP--GETR---LDLLEKNAK----IMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             HHh-----------CCCCEEEEccCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEec
Confidence            221           36899999999854  22  2232   334454543    4455566666555567777775

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.24  E-value=0.0046  Score=72.77  Aligned_cols=178  Identities=12%  Similarity=0.117  Sum_probs=111.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +.++.++|++.+++++.+++.+|.++|+.|+++..... .......                    .+..+..+.+.-.|
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~~~~~~~--------------------~~~~~~~~~~~~~~ 1811 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-VSHSASP--------------------LASAIASVTLGTID 1811 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-ccccccc--------------------cccccccccccccc
Confidence            45788888888999999999999999999887742211 0000000                    11222334555556


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+++..+++.+....++++.+||..+....  .....+.......-...+...|.+.|.+.+.+... +.+.++.++...
T Consensus      1812 ~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~--~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~-~~~~~~~vsr~~ 1888 (2582)
T TIGR02813      1812 DTSIEAVIKDIEEKTAQIDGFIHLQPQHKS--VADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATN-ARASFVTVSRID 1888 (2582)
T ss_pred             hHHHHHHHHhhhccccccceEEEecccccc--ccccccccccchhhHHHHHHHHHHHHhhchhhccC-CCeEEEEEEecC
Confidence            678888888887777899999998775421  00000000111111234455678888877766544 456788887663


Q ss_pred             CCCCCCCCchh--------hHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 017635          191 SGGSSTPLTAV--------YGSTKCGLRQLQASLFKESKRSKVGVHTASPG  233 (368)
Q Consensus       191 ~~~~~~~~~~~--------Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG  233 (368)
                       +..++.....        -....+++.+|+|++++|+...-+|...+.|.
T Consensus      1889 -G~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1889 -GGFGYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             -CccccCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence             3333322111        12357899999999999999877888888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.21  E-value=0.0021  Score=60.93  Aligned_cols=152  Identities=13%  Similarity=0.126  Sum_probs=95.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      ++++|.|+|++|.+|..+|..|+..|.       ++++.+.++.  +++..+.++......             ....+.
T Consensus         1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------~~~~~~   67 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFP-------------LLAEIV   67 (322)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhcccc-------------ccCceE
Confidence            357899999999999999999998883       6999998543  354444444331100             001111


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCc
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGG  181 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g  181 (368)
                      . .  -.+.++           +..-|++|..||...  ++  ..+.   .+.++.|+.    +.+.+.+.+.+.. ..+
T Consensus        68 i-~--~~~~~~-----------~~daDivvitaG~~~--k~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~  122 (322)
T cd01338          68 I-T--DDPNVA-----------FKDADWALLVGAKPR--GP--GMER---ADLLKANGK----IFTAQGKALNDVASRDV  122 (322)
T ss_pred             E-e--cCcHHH-----------hCCCCEEEEeCCCCC--CC--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCe
Confidence            1 1  112222           236899999999854  22  2232   334555544    5566677776665 367


Q ss_pred             EEEEEcCCC-------CCCC-CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 017635          182 HIFNMDGAG-------SGGS-STPLTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       182 ~Iv~isS~~-------~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      .++++|-..       .-.. +.|....|+.++.--..|...+++.+.
T Consensus       123 iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         123 KVLVVGNPCNTNALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             EEEEecCcHHHHHHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence            777775321       1123 366777999999999999999998875

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.19  E-value=0.017  Score=47.96  Aligned_cols=115  Identities=17%  Similarity=0.234  Sum_probs=74.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|.|+|++|.+|.++|..|...+  .++++.++++++++....++..-...             .........   .+.+
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~-------------~~~~~~i~~---~~~~   65 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP-------------LPSPVRITS---GDYE   65 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG-------------STEEEEEEE---SSGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh-------------ccccccccc---cccc
Confidence            58899999999999999999987  47999999999888888887664321             112333333   2333


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++           ..-|++|..||...  .+  ..+   -.+.++.|..-    .+...+.+.+....+.++.++
T Consensus        66 ~~-----------~~aDivvitag~~~--~~--g~s---R~~ll~~N~~i----~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   66 AL-----------KDADIVVITAGVPR--KP--GMS---RLDLLEANAKI----VKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             GG-----------TTESEEEETTSTSS--ST--TSS---HHHHHHHHHHH----HHHHHHHHHHHSTTSEEEE-S
T ss_pred             cc-----------ccccEEEEeccccc--cc--ccc---HHHHHHHhHhH----HHHHHHHHHHhCCccEEEEeC
Confidence            22           35799999999753  22  223   34445656544    444455555444566666664

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK06849 hypothetical protein; Provisional

Probab=97.19  E-value=0.0037  Score=60.98  Aligned_cols=39  Identities=28%  Similarity=0.365  Sum_probs=35.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      ++|+|||||++.++|..+++.|.+.|++|++++.+....
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~   41 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPL   41 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH
Confidence            468999999999999999999999999999999886543

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.15  E-value=0.0011  Score=61.54  Aligned_cols=48  Identities=17%  Similarity=0.289  Sum_probs=42.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ++++|+++|+|+ ||+|+++++.|++.| .+|++++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 899999999999999 789999999998877766653

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.15  E-value=0.00052  Score=60.59  Aligned_cols=47  Identities=23%  Similarity=0.334  Sum_probs=40.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   75 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~   75 (368)
                      ..+++||+++|+|.+ .+|+.+|+.|.+.|++|++.+++.+++++..+
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~   69 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAE   69 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            357899999999986 89999999999999999999999877665544

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.11  E-value=0.0037  Score=59.70  Aligned_cols=86  Identities=21%  Similarity=0.334  Sum_probs=61.7

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---------------------HHHHHHHHHHHHHhhh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---------------------ESVRMTVTELEENLKE   83 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~---------------------~~~~~~~~~l~~~~~~   83 (368)
                      +.+.++++++|+|.|+ ||+|..+|+.|++.|. ++.+++++.                     .|.+.+.+.+++..  
T Consensus        17 ~~Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~in--   93 (338)
T PRK12475         17 EGQRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKIN--   93 (338)
T ss_pred             HHHHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHC--
Confidence            4566788999999996 6899999999999997 899999874                     24455555555432  


Q ss_pred             hhhhcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635           84 GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus        84 ~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                                   +..++..+..|++. +.+++++       ...|++|.+.
T Consensus        94 -------------p~v~i~~~~~~~~~-~~~~~~~-------~~~DlVid~~  124 (338)
T PRK12475         94 -------------SEVEIVPVVTDVTV-EELEELV-------KEVDLIIDAT  124 (338)
T ss_pred             -------------CCcEEEEEeccCCH-HHHHHHh-------cCCCEEEEcC
Confidence                         34567778778763 3444432       3579888765

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.10  E-value=0.0068  Score=56.50  Aligned_cols=49  Identities=27%  Similarity=0.340  Sum_probs=43.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+++..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~  173 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA  173 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh
Confidence            467899999996 6899999999999997 799999999999888887754

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.05  E-value=0.0071  Score=58.60  Aligned_cols=77  Identities=17%  Similarity=0.199  Sum_probs=54.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +.+++++|.|+ |.+|+..++.+.+.|++|++++|+.++++.+...+                    +..   +..+..+
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~--------------------g~~---v~~~~~~  220 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF--------------------GGR---IHTRYSN  220 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc--------------------Cce---eEeccCC
Confidence            56778999987 68999999999999999999999987765443322                    111   2234555


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      .+++.+.+       ...|++|++++..
T Consensus       221 ~~~l~~~l-------~~aDvVI~a~~~~  241 (370)
T TIGR00518       221 AYEIEDAV-------KRADLLIGAVLIP  241 (370)
T ss_pred             HHHHHHHH-------ccCCEEEEccccC
Confidence            55554433       3579999998663

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd00704 MDH Malate dehydrogenase

Probab=97.03  E-value=0.0042  Score=58.98  Aligned_cols=111  Identities=13%  Similarity=0.121  Sum_probs=67.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-C------eEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           35 NVVITGSTRGLGKALAREFLLSG-D------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G-~------~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      +|.||||+|.+|..++..|+..| +      .+++.++++  +.++..                               .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~-------------------------------~   50 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGV-------------------------------V   50 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcccee-------------------------------e
Confidence            58999999999999999999876 2      499999986  433322                               3


Q ss_pred             ccCCCHHHH--H--HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCC
Q 017635          106 CDVCEPADV--Q--KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKG  180 (368)
Q Consensus       106 ~Dv~~~~~v--~--~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~  180 (368)
                      .|+.|....  .  .......+.+...|++|+.||...  .+  ..+   -.+.++.|.    .+.+.+.+.+.+. +..
T Consensus        51 ~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~--~~--g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~  119 (323)
T cd00704          51 MELQDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPR--KP--GME---RADLLRKNA----KIFKEQGEALNKVAKPT  119 (323)
T ss_pred             eehhhhcccccCCcEEecChHHHhCCCCEEEEeCCCCC--Cc--CCc---HHHHHHHhH----HHHHHHHHHHHHhCCCC
Confidence            333332100  0  000111233347899999999854  22  223   234555554    4556667777766 256


Q ss_pred             cEEEEEc
Q 017635          181 GHIFNMD  187 (368)
Q Consensus       181 g~Iv~is  187 (368)
                      +.++++|
T Consensus       120 ~iiivvs  126 (323)
T cd00704         120 VKVLVVG  126 (323)
T ss_pred             eEEEEeC
Confidence            7777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.03  E-value=0.015  Score=54.97  Aligned_cols=119  Identities=18%  Similarity=0.211  Sum_probs=78.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      |+-++++|.|+|+ |++|.++|..|+..|.  ++++.++++++++....++......             . .++.... 
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~-------------~-~~~~i~~-   65 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPF-------------T-SPTKIYA-   65 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccc-------------c-CCeEEEe-
Confidence            3456789999998 9999999999999985  7999999999888888888653210             1 1222221 


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                        .+.+++           ..-|++|..||...  ++  ..+.   ...++.|..    +.+.+.+.+.+....+.++++
T Consensus        66 --~~~~~~-----------~~adivIitag~~~--k~--g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivv  121 (315)
T PRK00066         66 --GDYSDC-----------KDADLVVITAGAPQ--KP--GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVA  121 (315)
T ss_pred             --CCHHHh-----------CCCCEEEEecCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEc
Confidence              232222           36799999999854  22  2233   344555544    444555666655456777777


Q ss_pred             c
Q 017635          187 D  187 (368)
Q Consensus       187 s  187 (368)
                      +
T Consensus       122 s  122 (315)
T PRK00066        122 S  122 (315)
T ss_pred             c
Confidence            5

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.02  E-value=0.0036  Score=59.47  Aligned_cols=113  Identities=17%  Similarity=0.172  Sum_probs=68.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +|.|+|++|.+|..++..|+..|.       .+++.++++...                             .......|
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------------------------~a~g~~~D   51 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------------------------VLEGVVME   51 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------------------------ccceeEee
Confidence            478999999999999999998663       599999865420                             12223445


Q ss_pred             CCCHHHHH--HH--HHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 017635          108 VCEPADVQ--KL--SNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  182 (368)
Q Consensus       108 v~~~~~v~--~~--~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  182 (368)
                      +.|.....  ..  .....+.+...|++|+.||...  .+  .   +...+.++.|+.    +.+.+.+.+.+. +..+.
T Consensus        52 l~d~~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~--~~--~---~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~i  120 (324)
T TIGR01758        52 LMDCAFPLLDGVVPTHDPAVAFTDVDVAILVGAFPR--KE--G---MERRDLLSKNVK----IFKEQGRALDKLAKKDCK  120 (324)
T ss_pred             hhcccchhcCceeccCChHHHhCCCCEEEEcCCCCC--CC--C---CcHHHHHHHHHH----HHHHHHHHHHhhCCCCeE
Confidence            54443110  00  0011233457999999999854  11  1   224556666654    556666666665 25677


Q ss_pred             EEEEc
Q 017635          183 IFNMD  187 (368)
Q Consensus       183 Iv~is  187 (368)
                      |+++|
T Consensus       121 iivvs  125 (324)
T TIGR01758       121 VLVVG  125 (324)
T ss_pred             EEEeC
Confidence            77775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.02  E-value=0.0033  Score=58.58  Aligned_cols=48  Identities=15%  Similarity=0.128  Sum_probs=41.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++++++.
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            467899999985 8999999999999996 79999999999888777653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.01  E-value=0.0024  Score=60.83  Aligned_cols=43  Identities=21%  Similarity=0.264  Sum_probs=37.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      .|++++|+||++++|..+++.+...|++|+.++++.++.+.+.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~  193 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK  193 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence            5789999999999999999888889999999999887765443

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.00  E-value=0.0029  Score=60.26  Aligned_cols=43  Identities=28%  Similarity=0.370  Sum_probs=35.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      |+++||+||+||+|...++-....|++++++..+.++.+ .+++
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~  185 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKE  185 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHh
Confidence            899999999999999999988899988777777776655 4443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.99  E-value=0.0025  Score=59.30  Aligned_cols=78  Identities=22%  Similarity=0.290  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ...++|-||+|--|.-+|++|+++|.+..+.+||.+++..+.+.|.                    .+...+++++  ++
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG--------------------~~~~~~p~~~--p~   63 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG--------------------PEAAVFPLGV--PA   63 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC--------------------ccccccCCCC--HH
Confidence            4579999999999999999999999999999999999988877763                    3444455555  55


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                      .+++.++       +.++|+||+|...
T Consensus        64 ~~~~~~~-------~~~VVlncvGPyt   83 (382)
T COG3268          64 ALEAMAS-------RTQVVLNCVGPYT   83 (382)
T ss_pred             HHHHHHh-------cceEEEecccccc
Confidence            5555544       6899999999643

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.93  E-value=0.003  Score=60.69  Aligned_cols=42  Identities=21%  Similarity=0.278  Sum_probs=36.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|++++|+|+++++|..+++.+...|++|+.++++.++.+.+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~  199 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLL  199 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            578999999999999999988888999999999888776543

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.88  E-value=0.0043  Score=62.15  Aligned_cols=47  Identities=19%  Similarity=0.343  Sum_probs=40.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      .++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..++
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            3567899999996 6999999999999999999999998877655443

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.88  E-value=0.0072  Score=53.41  Aligned_cols=87  Identities=20%  Similarity=0.279  Sum_probs=59.2

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHhhhhh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGM   85 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~-------------------~~~~~~~~~~l~~~~~~~~   85 (368)
                      +.+.++++++|+|.| .||+|..+++.|+..|. ++.+++++                   ..|.+.+.+.+++..    
T Consensus        14 ~~q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n----   88 (202)
T TIGR02356        14 EGQQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELN----   88 (202)
T ss_pred             HHHHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhC----
Confidence            445678899999999 56999999999999996 89999987                   234455555555432    


Q ss_pred             hhcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           86 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                                 +..++..+..++.+ +++.+++       ...|++|.+..
T Consensus        89 -----------p~v~i~~~~~~i~~-~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        89 -----------SDIQVTALKERVTA-ENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             -----------CCCEEEEehhcCCH-HHHHHHH-------hCCCEEEECCC
Confidence                       23456666555543 3333332       36799988753

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.88  E-value=0.0073  Score=56.23  Aligned_cols=49  Identities=22%  Similarity=0.342  Sum_probs=42.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      +.++|+++|.|+ ||-|++++..|++.|+ +|.++.|+.++.+++.+++..
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~  173 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN  173 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence            466899999996 7999999999999996 699999999998888777643

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.85  E-value=0.0039  Score=58.80  Aligned_cols=41  Identities=27%  Similarity=0.426  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .+++++|+|+++++|+++++.+...|++|+.++++.++.+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~  202 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKI  202 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            46899999999999999999999999999999988766543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.85  E-value=0.021  Score=57.27  Aligned_cols=43  Identities=21%  Similarity=0.142  Sum_probs=37.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ...+.+|+|+|+ |.+|+..++.+...|++|+++++++++++..
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a  204 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV  204 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            345899999995 5899999999999999999999999887643

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.85  E-value=0.0035  Score=59.35  Aligned_cols=42  Identities=26%  Similarity=0.362  Sum_probs=36.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|.+++|+|+++++|..+++.+...|++|+.++++.++.+.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~  179 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL  179 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999988888999999999988765543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.83  E-value=0.0047  Score=57.54  Aligned_cols=41  Identities=27%  Similarity=0.396  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++++++|+|+++++|+++++.+...|++|++++++.++.+.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~  179 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA  179 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999999999999999998776543

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.79  E-value=0.0068  Score=59.47  Aligned_cols=47  Identities=21%  Similarity=0.367  Sum_probs=40.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++++|+++|.|+ ||+|+.+++.|+++|. +++++.|+.++.+++.+++
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~  225 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF  225 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence            578999999997 8999999999999995 7999999988877665543

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.75  E-value=0.0049  Score=58.73  Aligned_cols=43  Identities=23%  Similarity=0.267  Sum_probs=36.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVT   75 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~   75 (368)
                      +++++|+||++++|.++++.+...|+ +|+.+++++++.+.+.+
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~  198 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKS  198 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence            38999999999999999988888898 79999998877655444

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.72  E-value=0.013  Score=55.91  Aligned_cols=41  Identities=29%  Similarity=0.426  Sum_probs=35.9

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   67 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~   67 (368)
                      +.+.+++.++|+|.|+ ||+|..+|+.|++.|. ++.+++++.
T Consensus        17 ~~Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         17 EGQQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            4456788899999997 7999999999999997 899999863

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.71  E-value=0.0066  Score=60.22  Aligned_cols=81  Identities=21%  Similarity=0.173  Sum_probs=55.0

Q ss_pred             CCCCCeEEEEcCC----------------ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCc
Q 017635           30 KAGPRNVVITGST----------------RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        30 ~~~~k~vlITGas----------------~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      +++||+||||+|.                |-+|+++|+++..+|++|++++-... +.                      
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~----------------------  309 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA----------------------  309 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC----------------------
Confidence            5899999999974                47999999999999999999874321 00                      


Q ss_pred             ccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC
Q 017635           94 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP  143 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~  143 (368)
                         ....+.++  ++.+.++..+   .+.+.+. .|++|++|.+.. +.+
T Consensus       310 ---~p~~v~~i--~V~ta~eM~~---av~~~~~-~Di~I~aAAVaD-yrp  349 (475)
T PRK13982        310 ---DPQGVKVI--HVESARQMLA---AVEAALP-ADIAIFAAAVAD-WRV  349 (475)
T ss_pred             ---CCCCceEE--EecCHHHHHH---HHHhhCC-CCEEEEeccccc-eee
Confidence               11234434  3334444444   4444443 699999999865 444

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.69  E-value=0.083  Score=49.58  Aligned_cols=41  Identities=29%  Similarity=0.353  Sum_probs=36.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      ..+.+++++|.|. |++|+.+++.|.+.|++|.+++|+.++.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4567999999997 6799999999999999999999997654

>PRK05086 malate dehydrogenase; Provisional

Probab=96.69  E-value=0.015  Score=55.05  Aligned_cols=35  Identities=23%  Similarity=0.336  Sum_probs=28.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-C--CCeEEEEeCChH
Q 017635           34 RNVVITGSTRGLGKALAREFLL-S--GDRVVVASRSSE   68 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~-~--G~~Vil~~R~~~   68 (368)
                      ++++|.||+|++|.+++..+.. .  +..+++.+|++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4689999999999999998855 2  357888888743

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.68  E-value=0.0022  Score=46.45  Aligned_cols=34  Identities=29%  Similarity=0.538  Sum_probs=22.7

Q ss_pred             CCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCCh
Q 017635           33 PRNVVITGSTRGLGKA--LAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        33 ~k~vlITGas~GIG~a--ia~~la~~G~~Vil~~R~~   67 (368)
                      +|+|||+|+|+|.|+|  ++..| ..|++.+-++...
T Consensus        39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            4999999999999999  55555 6788888777643

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.68  E-value=0.0095  Score=55.25  Aligned_cols=50  Identities=24%  Similarity=0.360  Sum_probs=43.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      .+.++++++|.|| ||-+++++..|++.|. +|+++.|+.++.+++.+.+.+
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~  172 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE  172 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            3556899999995 6899999999999995 799999999999888887765

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.67  E-value=0.0075  Score=57.81  Aligned_cols=80  Identities=21%  Similarity=0.303  Sum_probs=54.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|+.+||.||++|+|.+.++-....|+..+++.++.++.+ +++++.                    ..   ...|..++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lG--------------------Ad---~vvdy~~~  212 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLG--------------------AD---EVVDYKDE  212 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcC--------------------Cc---EeecCCCH
Confidence            5789999999999999999888888955666666655543 233321                    11   34588884


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      +-++..-+..   .+++|+++-|.|..
T Consensus       213 ~~~e~~kk~~---~~~~DvVlD~vg~~  236 (347)
T KOG1198|consen  213 NVVELIKKYT---GKGVDVVLDCVGGS  236 (347)
T ss_pred             HHHHHHHhhc---CCCccEEEECCCCC
Confidence            4444333322   46899999999863

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.66  E-value=0.01  Score=55.38  Aligned_cols=42  Identities=33%  Similarity=0.429  Sum_probs=37.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..+.+|+++|.|. |++|+++|+.|...|++|++.+|+.++.+
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            4778999999998 67999999999999999999999987543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.64  E-value=0.047  Score=49.21  Aligned_cols=36  Identities=22%  Similarity=0.295  Sum_probs=31.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      ++++++|+|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            567789999995 5999999999999995 78888865

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.63  E-value=0.058  Score=49.68  Aligned_cols=38  Identities=13%  Similarity=0.216  Sum_probs=32.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCC
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRS   66 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~   66 (368)
                      ..++++.+|+|.|+ ||+|.++|+.|++.| -++.+++.+
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            44678899999985 599999999999999 578888875

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.62  E-value=0.0063  Score=55.70  Aligned_cols=73  Identities=19%  Similarity=0.361  Sum_probs=53.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++|+|||+- |+.++++|.++|++|+...++....+...+                       .....+..+..|.+++
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-----------------------~g~~~v~~g~l~~~~l   57 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-----------------------HQALTVHTGALDPQEL   57 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-----------------------cCCceEEECCCCHHHH
Confidence            6999999987 999999999999999999988764322110                       1122345677777777


Q ss_pred             HHHHHHHHhHcCCCCEEEEccC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      .+++.+     .++|+||+.+.
T Consensus        58 ~~~l~~-----~~i~~VIDAtH   74 (256)
T TIGR00715        58 REFLKR-----HSIDILVDATH   74 (256)
T ss_pred             HHHHHh-----cCCCEEEEcCC
Confidence            666644     27999998775

This enzyme was found to be a monomer by gel filtration.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.58  E-value=0.012  Score=52.99  Aligned_cols=76  Identities=20%  Similarity=0.342  Sum_probs=58.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +.++|.|++ -+|+.+|+.|.++|++|+++++++++.++..++-                     ...+.+.+|-+|++-
T Consensus         1 m~iiIiG~G-~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~---------------------~~~~~v~gd~t~~~~   58 (225)
T COG0569           1 MKIIIIGAG-RVGRSVARELSEEGHNVVLIDRDEERVEEFLADE---------------------LDTHVVIGDATDEDV   58 (225)
T ss_pred             CEEEEECCc-HHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh---------------------cceEEEEecCCCHHH
Confidence            367788865 6999999999999999999999999877644321                     356778999999987


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      ++++=      ....|++|...|-
T Consensus        59 L~~ag------i~~aD~vva~t~~   76 (225)
T COG0569          59 LEEAG------IDDADAVVAATGN   76 (225)
T ss_pred             HHhcC------CCcCCEEEEeeCC
Confidence            77651      1257888876653

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.57  E-value=0.015  Score=54.27  Aligned_cols=48  Identities=13%  Similarity=0.223  Sum_probs=38.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---HHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTEL   77 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~---~~~~~~~~~l   77 (368)
                      .++++|+++|.|+ ||-+++++..|+.+|+ +|.++.|+.   ++.+++.+++
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~  171 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV  171 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHh
Confidence            3578899999996 6779999999999996 799999995   4666655554

>PRK14968 putative methyltransferase; Provisional

Probab=96.46  E-value=0.073  Score=45.85  Aligned_cols=124  Identities=19%  Similarity=0.174  Sum_probs=71.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+++++|-.|++.|.   ++..+++++.+|+.++++++.++.+.+.+.....              ....+.++.+|+.+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--------------~~~~~~~~~~d~~~   84 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNI--------------RNNGVEVIRSDLFE   84 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCC--------------CCcceEEEeccccc
Confidence            357889999988776   5666666789999999998877766655543210              01126778888754


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHH---HHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS---ILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~---~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      .         ..+  ..+|.++.|..... ..+.... .+.+...+..+..+.   -.+.+.+.+.|+   .+|.++++.
T Consensus        85 ~---------~~~--~~~d~vi~n~p~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk---~gG~~~~~~  148 (188)
T PRK14968         85 P---------FRG--DKFDVILFNPPYLP-TEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLK---PGGRILLLQ  148 (188)
T ss_pred             c---------ccc--cCceEEEECCCcCC-CCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcC---CCeEEEEEE
Confidence            2         111  26899999987643 1222111 122232332222222   234556666664   356666554

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.46  E-value=0.028  Score=50.09  Aligned_cols=40  Identities=25%  Similarity=0.253  Sum_probs=34.6

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +.+.+++.++|+|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        21 ~~q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         21 KLLEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4456788899999995 7999999999999996 59999887

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.46  E-value=0.02  Score=55.67  Aligned_cols=85  Identities=18%  Similarity=0.248  Sum_probs=57.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHhhhhhhh
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMA   87 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~-------------------~~~~~~~~~~l~~~~~~~~~~   87 (368)
                      +.++++++|+|.|+ ||+|..+++.|+..|. ++.+++++                   ..|.+.+.+.+++..      
T Consensus       130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n------  202 (376)
T PRK08762        130 QRRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN------  202 (376)
T ss_pred             HHHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC------
Confidence            44678889999975 7999999999999997 79999987                   345555566665532      


Q ss_pred             cCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           88 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                               +..++..+...+.+ +.+..++       ...|++|++..
T Consensus       203 ---------p~v~v~~~~~~~~~-~~~~~~~-------~~~D~Vv~~~d  234 (376)
T PRK08762        203 ---------PDVQVEAVQERVTS-DNVEALL-------QDVDVVVDGAD  234 (376)
T ss_pred             ---------CCCEEEEEeccCCh-HHHHHHH-------hCCCEEEECCC
Confidence                     22455555555543 3333332       25788888754

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.45  E-value=0.046  Score=54.84  Aligned_cols=42  Identities=21%  Similarity=0.143  Sum_probs=36.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ...+.+++|.|+ |.+|...++.+...|++|++.+++.++++.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~  202 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQ  202 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            445789999995 799999999999999999999999887553

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.45  E-value=0.021  Score=56.34  Aligned_cols=46  Identities=20%  Similarity=0.426  Sum_probs=39.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~   76 (368)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            477899999997 899999999999999 7899999998877655444

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.44  E-value=0.028  Score=51.22  Aligned_cols=40  Identities=20%  Similarity=0.285  Sum_probs=34.3

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +.+..++.++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        25 ~~Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         25 DGQEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHHHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3456788999999998 8999999999999995 78888765

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.44  E-value=0.024  Score=49.98  Aligned_cols=43  Identities=21%  Similarity=0.245  Sum_probs=36.5

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      ...+.+-+++.++|+|.|+ ||+|..+|+.|++.|. ++++++++
T Consensus        11 ~~~~~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        11 HTPKIVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             cCHHHHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3344456788899999997 6899999999999998 69999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.41  E-value=0.017  Score=54.77  Aligned_cols=41  Identities=24%  Similarity=0.386  Sum_probs=36.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|++ |+|...++.....|++|+.++|++++++.+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a  206 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELA  206 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHH
Confidence            48999999999 999998888878999999999999987643

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.41  E-value=0.014  Score=53.03  Aligned_cols=41  Identities=27%  Similarity=0.390  Sum_probs=35.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .++++++|+|+++ +|+++++.+...|.+|+++++++++.+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~  173 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL  173 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence            3678999999998 9999999999999999999998766543

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PLN00203 glutamyl-tRNA reductase

Probab=96.39  E-value=0.021  Score=57.64  Aligned_cols=47  Identities=28%  Similarity=0.454  Sum_probs=40.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++.+++++|.|+ |++|..+++.|...|+ +|+++.|+.++.+.+.+++
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            377899999998 9999999999999996 7999999998877665543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.38  E-value=0.021  Score=56.43  Aligned_cols=46  Identities=22%  Similarity=0.396  Sum_probs=39.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   76 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~   76 (368)
                      ++.+++++|.|+ |++|..+++.|...|+ +|++++|+.++.++..++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999986 8999999999999997 799999998887665544

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.35  E-value=0.072  Score=50.55  Aligned_cols=119  Identities=15%  Similarity=0.214  Sum_probs=72.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +.++|.|+|| |.+|..++..++..| +.|++.+++++.++...-++.....             ..+.... +.. -+|
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~-------------~~~~~~~-i~~-~~d   67 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFST-------------LVGSNIN-ILG-TNN   67 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhcc-------------ccCCCeE-EEe-CCC
Confidence            4578999997 889999999999999 7899999998765543333322100             0111111 111 123


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      .+++           ..-|++|.++|...  .+  ..+.   ...+..|.    .+.+.+.+.|.+....+.++++|-
T Consensus        68 ~~~l-----------~~ADiVVitag~~~--~~--g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsN  123 (319)
T PTZ00117         68 YEDI-----------KDSDVVVITAGVQR--KE--EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTN  123 (319)
T ss_pred             HHHh-----------CCCCEEEECCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            3322           25799999999754  22  2232   34555565    456666777766545666777753

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.33  E-value=0.015  Score=54.30  Aligned_cols=40  Identities=25%  Similarity=0.352  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ++++++|+|+++++|.++++.+...|++|+++.+++++.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA  178 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999999877654

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.32  E-value=0.087  Score=49.74  Aligned_cols=117  Identities=16%  Similarity=0.201  Sum_probs=67.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC-
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV-  108 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv-  108 (368)
                      +++.|+|++|.+|..++..|+..|.  .|++++|++  ++++....++.+....             .+....   ... 
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~-------------~~~~~~---i~~~   64 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAA-------------AGIDAE---IKIS   64 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhc-------------cCCCcE---EEEC
Confidence            3689999999999999999999985  499999955  5554444444321110             011111   111 


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++           +..-|++|.++|...  ++  ..+.   ...++.|+.-.    +.+.+.|.+....+.++++++
T Consensus        65 ~d~~~-----------l~~aDiViitag~p~--~~--~~~r---~dl~~~n~~i~----~~~~~~i~~~~~~~~viv~~n  122 (309)
T cd05294          65 SDLSD-----------VAGSDIVIITAGVPR--KE--GMSR---LDLAKKNAKIV----KKYAKQIAEFAPDTKILVVTN  122 (309)
T ss_pred             CCHHH-----------hCCCCEEEEecCCCC--CC--CCCH---HHHHHHHHHHH----HHHHHHHHHHCCCeEEEEeCC
Confidence            12221           136899999999743  21  2232   23444454444    444444444434667777765

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.23  E-value=0.013  Score=50.08  Aligned_cols=44  Identities=23%  Similarity=0.342  Sum_probs=38.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .++++|+++|.|++.-.|..+++.|.++|++|.++.|+.+++.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~   83 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE   83 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH
Confidence            47899999999996667999999999999999999998755443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.23  E-value=0.19  Score=47.76  Aligned_cols=125  Identities=14%  Similarity=0.137  Sum_probs=72.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+.++|.|.|+ |.+|..+|..++..| .+|++.+++++.++...-++.....             ..+.......  .+
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~-------------~~~~~~~I~~--~~   67 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNV-------------IAGSNSKVIG--TN   67 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhh-------------ccCCCeEEEE--CC
Confidence            34578999995 779999999999999 4899999998865432222222100             0111112221  12


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |.+++           ..-|++|+.+|...... ..+.+.+ -.+.+..|+    .+.+.+.+.+.+....+.++++|-
T Consensus        68 d~~~l-----------~~aDiVI~tag~~~~~~-~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sN  129 (321)
T PTZ00082         68 NYEDI-----------AGSDVVIVTAGLTKRPG-KSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITN  129 (321)
T ss_pred             CHHHh-----------CCCCEEEECCCCCCCCC-CCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            32221           25799999999854211 1111111 133445553    456677777776655667777753

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.23  E-value=0.034  Score=53.59  Aligned_cols=87  Identities=10%  Similarity=0.081  Sum_probs=59.5

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHhhhhh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGM   85 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~-------------------~~~~~~~~~l~~~~~~~~   85 (368)
                      +.+.++++++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .|.+.+.+.|++..    
T Consensus        21 ~~q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~n----   95 (355)
T PRK05597         21 QGQQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALN----   95 (355)
T ss_pred             HHHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHC----
Confidence            3456788999999997 7999999999999995 788888753                   45555666665543    


Q ss_pred             hhcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           86 MAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        86 ~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                                 +..++..+..+++. +...+++       ...|++|.+..
T Consensus        96 -----------p~v~v~~~~~~i~~-~~~~~~~-------~~~DvVvd~~d  127 (355)
T PRK05597         96 -----------PDVKVTVSVRRLTW-SNALDEL-------RDADVILDGSD  127 (355)
T ss_pred             -----------CCcEEEEEEeecCH-HHHHHHH-------hCCCEEEECCC
Confidence                       33566666666654 2333332       25788887653

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.19  E-value=0.02  Score=54.74  Aligned_cols=41  Identities=20%  Similarity=0.297  Sum_probs=34.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      ..+++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~  209 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSL  209 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHH
Confidence            36899999996 8999999988888898 68889999887653

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.17  E-value=0.031  Score=52.65  Aligned_cols=42  Identities=19%  Similarity=0.325  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|.+++|+||++++|.++++.+...|++|+.++++.++.+.+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l  184 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL  184 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999988888999999999888765443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.14  E-value=0.024  Score=61.48  Aligned_cols=78  Identities=21%  Similarity=0.244  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-Ce-------------EEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG-DR-------------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G-~~-------------Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      .+.|.|+|.|+ |.+|+..|+.|++.. +.             |++++++.++++++.+..                   
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-------------------  626 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-------------------  626 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-------------------
Confidence            45789999997 899999999999764 33             888999988776555432                   


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                        ..+..+++|++|.+++.++++       .+|+||++...
T Consensus       627 --~~~~~v~lDv~D~e~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        627 --ENAEAVQLDVSDSESLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             --CCCceEEeecCCHHHHHHhhc-------CCCEEEECCCc
Confidence              135678999999988877654       48999998864

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.13  E-value=0.043  Score=50.49  Aligned_cols=114  Identities=17%  Similarity=0.255  Sum_probs=71.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC----CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCccccc-CceeEEEeccCCC
Q 017635           36 VVITGSTRGLGKALAREFLLSG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV-HAKVAGIACDVCE  110 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G----~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~  110 (368)
                      +.|.||+|.+|..++..|+..|    .+|++.++++++++....+++.....             . ..++.  .  -+|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~-------------~~~~~i~--~--~~d   63 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP-------------LADIKVS--I--TDD   63 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh-------------ccCcEEE--E--CCc
Confidence            4689998899999999999998    78999999998888877777653211             0 11121  1  112


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                         ..+.       +..-|++|..+|....  +  ..+.   ...+..|    ..+.+...+.+.+....+.++++|
T Consensus        64 ---~~~~-------~~~aDiVv~t~~~~~~--~--g~~r---~~~~~~n----~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          64 ---PYEA-------FKDADVVIITAGVGRK--P--GMGR---LDLLKRN----VPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             ---hHHH-------hCCCCEEEECCCCCCC--c--CCCH---HHHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence               1111       2358999999997542  1  1121   1222223    344555666666555667777774

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.11  E-value=0.027  Score=53.12  Aligned_cols=42  Identities=26%  Similarity=0.324  Sum_probs=36.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++.+++|.|+++++|.++++.+.+.|++|+.++++.++.+.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~  186 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWL  186 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999888765543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.11  E-value=0.025  Score=53.44  Aligned_cols=46  Identities=22%  Similarity=0.403  Sum_probs=38.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l   77 (368)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++.++..+++
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            67899999997 899999999999877 57999999988876665543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.11  E-value=0.053  Score=48.80  Aligned_cols=86  Identities=13%  Similarity=0.196  Sum_probs=57.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHhhhhhh
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMM   86 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~-------------------~~~~~~~~~~l~~~~~~~~~   86 (368)
                      .+-+++.++|+|.| .||+|.++|+.|+..|. ++.++|.+                   ..|.+.+.+.+++..     
T Consensus        15 ~q~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-----   88 (228)
T cd00757          15 GQEKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAIN-----   88 (228)
T ss_pred             HHHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhC-----
Confidence            34577889999999 56999999999999996 67777653                   234444555554432     


Q ss_pred             hcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           87 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                                +..++..+..+++ .+.+.+++       ...|++|.+..
T Consensus        89 ----------p~~~i~~~~~~i~-~~~~~~~~-------~~~DvVi~~~d  120 (228)
T cd00757          89 ----------PDVEIEAYNERLD-AENAEELI-------AGYDLVLDCTD  120 (228)
T ss_pred             ----------CCCEEEEecceeC-HHHHHHHH-------hCCCEEEEcCC
Confidence                      2356666666663 33343333       35899988754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.09  E-value=0.023  Score=53.14  Aligned_cols=41  Identities=24%  Similarity=0.297  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++++++|+|+++++|.++++.+...|++|++++++.++.+.
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~  184 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDA  184 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999999999999999998776554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.06  E-value=0.039  Score=52.11  Aligned_cols=116  Identities=15%  Similarity=0.199  Sum_probs=68.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|.|+|++|.+|.++|..|+..|.  +++++++++  .+....+|...                . .......+.-.+  
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~----------------~-~~~~i~~~~~~~--   59 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHI----------------P-TAASVKGFSGEE--   59 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcC----------------C-cCceEEEecCCC--
Confidence            478999999999999999998874  799999876  22222222210                0 001111100001  


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +       ..+.+..-|++|..||...  .+  ..+   -.+.++.|+.    +.+...+.+.+....+.|+++|-.
T Consensus        60 ~-------~~~~~~daDivvitaG~~~--~~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNP  118 (312)
T TIGR01772        60 G-------LENALKGADVVVIPAGVPR--KP--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNP  118 (312)
T ss_pred             c-------hHHHcCCCCEEEEeCCCCC--CC--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCc
Confidence            1       1122346899999999754  22  222   3445666665    566667777666567777777643

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.01  E-value=0.085  Score=43.21  Aligned_cols=80  Identities=20%  Similarity=0.373  Sum_probs=55.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHhhhhhhhcCCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAAGGSS   92 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~-------------------~~~~~~~~~~l~~~~~~~~~~~~~~~   92 (368)
                      .++|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..|.+.+.+.+++..           
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~n-----------   69 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEIN-----------   69 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHS-----------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhc-----------
Confidence            478999985 5899999999999997 68888863                   234455555555433           


Q ss_pred             cccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           93 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        93 ~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                          +..++..+..++ +.+...++++       ..|++|.+..
T Consensus        70 ----p~~~v~~~~~~~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   70 ----PDVEVEAIPEKI-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             ----TTSEEEEEESHC-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             ----Cceeeeeeeccc-cccccccccc-------CCCEEEEecC
Confidence                346788888888 3344555542       5799988743

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.92  E-value=0.065  Score=52.17  Aligned_cols=47  Identities=19%  Similarity=0.415  Sum_probs=42.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++++|+++|.|++ -+|.-+|++|+++| .+|+++.|+.++.+++++++
T Consensus       175 ~L~~~~vlvIGAG-em~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         175 SLKDKKVLVIGAG-EMGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             ccccCeEEEEccc-HHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            4789999999964 79999999999999 68999999999998888776

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.89  E-value=0.095  Score=43.33  Aligned_cols=31  Identities=26%  Similarity=0.454  Sum_probs=26.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +++|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            4788896 7999999999999997 68888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.88  E-value=0.11  Score=51.77  Aligned_cols=38  Identities=13%  Similarity=0.238  Sum_probs=33.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .+.+|+++|+|.+ |+|.++|+.|+++|++|++.+.+..
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4678999999986 9999999999999999999987654

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.87  E-value=0.074  Score=45.78  Aligned_cols=32  Identities=28%  Similarity=0.347  Sum_probs=27.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   67 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~   67 (368)
                      +|+|.|+ ||+|..+++.|++.|. ++.+.+.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3788885 7999999999999997 599999875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.87  E-value=0.035  Score=52.74  Aligned_cols=40  Identities=20%  Similarity=0.268  Sum_probs=34.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~   72 (368)
                      .|++++|+|+ +++|..+++.+...|++ |+++++++++.+.
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~  203 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL  203 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4889999986 89999999998899998 9999998877653

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.87  E-value=0.043  Score=43.43  Aligned_cols=71  Identities=27%  Similarity=0.320  Sum_probs=52.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      ++|.|.+ .+|+.+++.|.+.+.+|++++++++..++..++                       .+.++.+|.++++.++
T Consensus         1 vvI~G~g-~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~-----------------------~~~~i~gd~~~~~~l~   56 (116)
T PF02254_consen    1 VVIIGYG-RIGREIAEQLKEGGIDVVVIDRDPERVEELREE-----------------------GVEVIYGDATDPEVLE   56 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT-----------------------TSEEEES-TTSHHHHH
T ss_pred             eEEEcCC-HHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc-----------------------ccccccccchhhhHHh
Confidence            5788875 799999999999777999999998875543221                       2668899999999887


Q ss_pred             HHHHHHHhHcCCCCEEEEccC
Q 017635          116 KLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ++-      ..+.|.+|...+
T Consensus        57 ~a~------i~~a~~vv~~~~   71 (116)
T PF02254_consen   57 RAG------IEKADAVVILTD   71 (116)
T ss_dssp             HTT------GGCESEEEEESS
T ss_pred             hcC------ccccCEEEEccC
Confidence            652      125787776543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.83  E-value=0.041  Score=54.66  Aligned_cols=39  Identities=23%  Similarity=0.358  Sum_probs=34.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      +++|.|+ |.+|+++++.|.++|+.|+++++++++.+...
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~   40 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQ   40 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence            5888887 89999999999999999999999988766543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.79  E-value=0.087  Score=44.71  Aligned_cols=92  Identities=17%  Similarity=0.123  Sum_probs=57.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++|-+.|- |-+|..+|++|+++|++|.+.+|++++.++..++-.....          .....-.+..++-.=+.+.++
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~----------s~~e~~~~~dvvi~~v~~~~~   70 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVAD----------SPAEAAEQADVVILCVPDDDA   70 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEES----------SHHHHHHHBSEEEE-SSSHHH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhh----------hhhhHhhcccceEeecccchh
Confidence            46788886 6899999999999999999999999887766533100000          000001123456666888889


Q ss_pred             HHHHHHH--HHhHcCCCCEEEEccC
Q 017635          114 VQKLSNF--AVNEFGSIDIWINNAG  136 (368)
Q Consensus       114 v~~~~~~--i~~~~g~iD~li~nAG  136 (368)
                      +++++..  +.....+=+++|++.-
T Consensus        71 v~~v~~~~~i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   71 VEAVLFGENILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred             hhhhhhhhHHhhccccceEEEecCC
Confidence            9998877  6655544456665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK05442 malate dehydrogenase; Provisional

Probab=95.77  E-value=0.041  Score=52.28  Aligned_cols=118  Identities=14%  Similarity=0.167  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      ++++|.|+|++|.+|..+|..|+..|.       .+++.+.++  ++++....++......             ....+.
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~-------------~~~~~~   69 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFP-------------LLAGVV   69 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhh-------------hcCCcE
Confidence            457899999999999999999998772       699999854  3355444455432100             001111


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCc
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGG  181 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g  181 (368)
                       +..  .+.           +.+..-|++|..||...  ++  ..+   -.+.++.|..    +.+.+.+.+.+.. ..+
T Consensus        70 -i~~--~~y-----------~~~~daDiVVitaG~~~--k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~  124 (326)
T PRK05442         70 -ITD--DPN-----------VAFKDADVALLVGARPR--GP--GME---RKDLLEANGA----IFTAQGKALNEVAARDV  124 (326)
T ss_pred             -Eec--ChH-----------HHhCCCCEEEEeCCCCC--CC--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCe
Confidence             111  111           22246899999999753  22  223   3445555554    5566666666632 467


Q ss_pred             EEEEEc
Q 017635          182 HIFNMD  187 (368)
Q Consensus       182 ~Iv~is  187 (368)
                      .++++|
T Consensus       125 iiivvs  130 (326)
T PRK05442        125 KVLVVG  130 (326)
T ss_pred             EEEEeC
Confidence            777775

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.76  E-value=0.048  Score=47.09  Aligned_cols=45  Identities=27%  Similarity=0.266  Sum_probs=37.2

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .....+.||++.|.|. |.||+++|+.|..-|++|+..+|+.....
T Consensus        29 ~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   29 FPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            3445789999999985 78999999999999999999999987543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.74  E-value=0.052  Score=52.45  Aligned_cols=41  Identities=12%  Similarity=0.278  Sum_probs=34.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+++++++++.+
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a  226 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA  226 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999985 8999999988888998 799999988876544

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.73  E-value=0.037  Score=51.89  Aligned_cols=41  Identities=24%  Similarity=0.293  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .+.+++|+|+++++|.++++.+...|++|+.++++.++.+.
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~  182 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTAL  182 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            46799999999999999999999999999999998876543

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.72  E-value=0.12  Score=51.09  Aligned_cols=117  Identities=12%  Similarity=0.116  Sum_probs=77.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-------CC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           33 PRNVVITGSTRGLGKALAREFLLS-------GD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~-------G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      .-+|.|+|++|.+|.++|..|+..       |.  +++++++++++++...-+|......             ...++.+
T Consensus       100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~-------------~~~~v~i  166 (444)
T PLN00112        100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP-------------LLREVSI  166 (444)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh-------------hcCceEE
Confidence            457999999999999999999988       63  7999999999998888888763211             0112211


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc-CCCCcE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD-QPKGGH  182 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~-~~~~g~  182 (368)
                       ..  .+.+++           ..-|++|..||...  ++  ..+   -.+.++.|..    +.+...+.+.+ ....+.
T Consensus       167 -~~--~~ye~~-----------kdaDiVVitAG~pr--kp--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~i  221 (444)
T PLN00112        167 -GI--DPYEVF-----------QDAEWALLIGAKPR--GP--GME---RADLLDINGQ----IFAEQGKALNEVASRNVK  221 (444)
T ss_pred             -ec--CCHHHh-----------CcCCEEEECCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeE
Confidence             11  233332           36899999999853  22  223   2445566654    45555666666 345677


Q ss_pred             EEEEc
Q 017635          183 IFNMD  187 (368)
Q Consensus       183 Iv~is  187 (368)
                      ||++|
T Consensus       222 vIVVs  226 (444)
T PLN00112        222 VIVVG  226 (444)
T ss_pred             EEEcC
Confidence            77765

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.72  E-value=0.25  Score=46.73  Aligned_cols=116  Identities=14%  Similarity=0.151  Sum_probs=73.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+|.|+|+ |.+|.++|..|+..|  .++++++.++++++....++.....-             ... ......  .|.
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~-------------~~~-~~v~~~--~dy   66 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAF-------------LKN-PKIEAD--KDY   66 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhcc-------------CCC-CEEEEC--CCH
Confidence            47899996 999999999999887  47999999988887777777653210             011 111211  233


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +++           ..-|++|..||...  .+  ..+.   ...++.|..    +.+.+.+.+.+....+.++++|-
T Consensus        67 ~~~-----------~~adivvitaG~~~--k~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          67 SVT-----------ANSKVVIVTAGARQ--NE--GESR---LDLVQRNVD----IFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             HHh-----------CCCCEEEECCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEccC
Confidence            322           25799999999854  22  2333   334555543    45555666665555777877753

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK04148 hypothetical protein; Provisional

Probab=95.69  E-value=0.03  Score=45.83  Aligned_cols=56  Identities=18%  Similarity=0.208  Sum_probs=44.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +++.+++.|.+  .|.++|+.|++.|++|+.++.++...+.+.+                       ..+.++..|+.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-----------------------~~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-----------------------LGLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-----------------------hCCeEEECcCCCC
Confidence            56789999987  7788899999999999999999986554322                       1356788888876


Q ss_pred             H
Q 017635          112 A  112 (368)
Q Consensus       112 ~  112 (368)
                      +
T Consensus        71 ~   71 (134)
T PRK04148         71 N   71 (134)
T ss_pred             C
Confidence            4

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.68  E-value=0.068  Score=43.24  Aligned_cols=76  Identities=24%  Similarity=0.413  Sum_probs=53.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHH-CCCeEE-EEeCCh----------------------HHHHHHHHHHHHHhhhhhhhcCC
Q 017635           35 NVVITGSTRGLGKALAREFLL-SGDRVV-VASRSS----------------------ESVRMTVTELEENLKEGMMAAGG   90 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~-~G~~Vi-l~~R~~----------------------~~~~~~~~~l~~~~~~~~~~~~~   90 (368)
                      +|+|.|++|-+|+++++.+.+ .+.+++ .++|+.                      +.+++..++              
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~--------------   67 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE--------------   67 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH--------------
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc--------------
Confidence            589999999999999999999 677755 456665                      112211111              


Q ss_pred             CCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635           91 SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus        91 ~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                              .+   +..|++.++.+...++.+.+.  ++.+++-..|.
T Consensus        68 --------~D---VvIDfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   68 --------AD---VVIDFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ---------S---EEEEES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             --------CC---EEEEcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence                    11   567999999999999888777  78889888775

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PLN02602 lactate dehydrogenase

Probab=95.68  E-value=0.3  Score=46.85  Aligned_cols=115  Identities=16%  Similarity=0.245  Sum_probs=73.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|.|+|+ |.+|.++|..++..|  .++++++.++++++....+|.....-             .+ ... +.. -.|.
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~-------------~~-~~~-i~~-~~dy  100 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAF-------------LP-RTK-ILA-STDY  100 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhc-------------CC-CCE-EEe-CCCH
Confidence            68999996 899999999999888  37999999998887777777653210             11 111 111 1222


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ..-|++|..||...  ++  ..+.   .+.+..|.    .+.+.+.+.+.+....+.+++++
T Consensus       101 ~~~-----------~daDiVVitAG~~~--k~--g~tR---~dll~~N~----~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        101 AVT-----------AGSDLCIVTAGARQ--IP--GESR---LNLLQRNV----ALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             HHh-----------CCCCEEEECCCCCC--Cc--CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence            222           36799999999854  22  2232   23344444    34555566666555567777775

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=95.55  E-value=0.11  Score=47.68  Aligned_cols=186  Identities=15%  Similarity=0.136  Sum_probs=100.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeC--C-----hHH----HHHHHHHHHHHhhhhhhhcCCCCcc
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASR--S-----SES----VRMTVTELEENLKEGMMAAGGSSKK   94 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la-~~G~~Vil~~R--~-----~~~----~~~~~~~l~~~~~~~~~~~~~~~~~   94 (368)
                      .+.+-.+|+|||.|+|+|.|++.--..+ .-|++-+.+.-  .     +-.    -....++..++              
T Consensus        35 gp~~ngPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~--------------  100 (398)
T COG3007          35 GPIKNGPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQ--------------  100 (398)
T ss_pred             CCccCCCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHh--------------
Confidence            3445568999999999999987533322 14565554432  1     100    01111111111              


Q ss_pred             cccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---------------------------------
Q 017635           95 NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---------------------------------  141 (368)
Q Consensus        95 ~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---------------------------------  141 (368)
                        .+--..-+..|.-+.+--++.++.|++.+|++|.+|+.-+.....                                 
T Consensus       101 --kGlyAksingDaFS~e~k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e  178 (398)
T COG3007         101 --KGLYAKSINGDAFSDEMKQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIE  178 (398)
T ss_pred             --cCceeeecccchhhHHHHHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeee
Confidence              233455678898888888888999999999999999875532100                                 


Q ss_pred             CCCCCCCHHHHHHHHHhhchHHH-HHHHHHHHHHHcCCCCcEEEEEcCCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHH
Q 017635          142 KPLLQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKE  219 (368)
Q Consensus       142 ~~~~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~~g~Iv~isS~~~~~-~~~~~~~~Y~aSKaal~~l~~~la~e  219 (368)
                      ..++..+.++++.+..|.=---+ +.+.+++..=.-. .+.+-+-.|-.+.-. .+......-+.+|.-++.-++.+...
T Consensus       179 ~~lepAseqEI~~Tv~VMGGeDWq~WidaLl~advla-eg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inek  257 (398)
T COG3007         179 ATLEPASEQEIADTVAVMGGEDWQMWIDALLEADVLA-EGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEK  257 (398)
T ss_pred             eecccccHHHHHHHHHhhCcchHHHHHHHHHhccccc-cCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHH
Confidence            01112244455544443211111 1223332211111 234445554332111 12233456789999999999999988


Q ss_pred             hCCCCeEEEE
Q 017635          220 SKRSKVGVHT  229 (368)
Q Consensus       220 ~~~~gI~v~~  229 (368)
                      +++.|=+.+.
T Consensus       258 La~~gG~A~v  267 (398)
T COG3007         258 LAALGGGARV  267 (398)
T ss_pred             HHhcCCCeee
Confidence            8876544443

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.53  E-value=0.1  Score=50.60  Aligned_cols=40  Identities=18%  Similarity=0.330  Sum_probs=34.2

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +.+.++++++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        34 ~~q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         34 EQQERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3456788899999996 5999999999999995 89998876

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.53  E-value=0.041  Score=45.56  Aligned_cols=45  Identities=13%  Similarity=0.197  Sum_probs=39.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ..+++||+++|.|.+.-.|+.++..|.++|++|.++.++...+++
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~   67 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQS   67 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHH
Confidence            358899999999999999999999999999999999876554443

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.50  E-value=0.06  Score=51.96  Aligned_cols=79  Identities=14%  Similarity=0.213  Sum_probs=53.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+.+++|.|+ +++|...++.+...|+ +|+.+++++++++.+ +++                    +...   ..|..+
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l--------------------Ga~~---~i~~~~  240 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF--------------------GATD---CVNPKD  240 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc--------------------CCCE---EEcccc
Confidence            4789999985 8999999999989999 699999998876543 222                    1111   124333


Q ss_pred             H-HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 P-ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~-~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      . +++.+.+.++..  +.+|+++.+.|.
T Consensus       241 ~~~~~~~~v~~~~~--~g~d~vid~~g~  266 (368)
T cd08300         241 HDKPIQQVLVEMTD--GGVDYTFECIGN  266 (368)
T ss_pred             cchHHHHHHHHHhC--CCCcEEEECCCC
Confidence            2 234444444333  369999998874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.49  E-value=0.05  Score=47.10  Aligned_cols=46  Identities=26%  Similarity=0.426  Sum_probs=38.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHh
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL   81 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~   81 (368)
                      +|.|.|+ |-+|..+|..++..|++|.+.+++++.+++..+.++...
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~l   46 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERLL   46 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHHH
Confidence            4778887 899999999999999999999999999888887776644

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.48  E-value=0.15  Score=48.35  Aligned_cols=117  Identities=16%  Similarity=0.171  Sum_probs=70.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +-+|.|+|++|.+|.++|..|+..|.       ++++.+.++  ++++....++......             ....+. 
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-------------~~~~~~-   68 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP-------------LLAGVV-   68 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc-------------ccCCcE-
Confidence            34799999999999999999998883       799999965  4455555565432100             000111 


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGH  182 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~  182 (368)
                      +..  .+.++           +..-|++|..||...  ++  ..+   -.+.++.|..    +.+.+.+.+.+... .+.
T Consensus        69 i~~--~~~~~-----------~~daDvVVitAG~~~--k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~i  124 (323)
T TIGR01759        69 ATT--DPEEA-----------FKDVDAALLVGAFPR--KP--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVK  124 (323)
T ss_pred             Eec--ChHHH-----------hCCCCEEEEeCCCCC--CC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeE
Confidence            111  12222           235799999999853  22  223   3445566654    44555666665544 667


Q ss_pred             EEEEc
Q 017635          183 IFNMD  187 (368)
Q Consensus       183 Iv~is  187 (368)
                      ++++|
T Consensus       125 iivvs  129 (323)
T TIGR01759       125 VLVVG  129 (323)
T ss_pred             EEEeC
Confidence            77775

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.47  E-value=0.11  Score=47.17  Aligned_cols=39  Identities=21%  Similarity=0.243  Sum_probs=33.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      .+.++++++|+|.|+ ||+|..+++.|++.|. ++++++.+
T Consensus        18 ~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        18 GQEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            355788899999995 5999999999999995 78888875

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK08328 hypothetical protein; Provisional

Probab=95.45  E-value=0.16  Score=45.85  Aligned_cols=41  Identities=24%  Similarity=0.388  Sum_probs=34.1

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   67 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~   67 (368)
                      +.+.++++++|+|.|+ ||+|.++++.|+..|. ++.+++.+.
T Consensus        20 ~~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         20 EGQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            3455778899999995 5999999999999995 688888764

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.43  E-value=0.12  Score=51.92  Aligned_cols=49  Identities=29%  Similarity=0.250  Sum_probs=37.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEE   79 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-~~~~~~~~l~~   79 (368)
                      ++++|+|+|.|+ |++|.++|+.|+++|++|.+.+++.. ......+.+++
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~   62 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA   62 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH
Confidence            567899999996 67999999999999999999986643 33333344433

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=95.42  E-value=0.43  Score=44.86  Aligned_cols=113  Identities=19%  Similarity=0.253  Sum_probs=71.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +.|.|+ |++|.++|..|+..|  .++++.++++++++....+|.+....              ........+  .|.++
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~--------------~~~~~i~~~--~~~~~   63 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAF--------------LATGTIVRG--GDYAD   63 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccc--------------cCCCeEEEC--CCHHH
Confidence            357887 579999999999998  67999999999888888887653210              011111211  22222


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           ..-|++|.++|...  .+  ..+.   ...+..|.    .+.+.+.+.+++....+.++++|
T Consensus        64 l-----------~~aDiVIitag~p~--~~--~~~R---~~l~~~n~----~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          64 A-----------ADADIVVITAGAPR--KP--GETR---LDLINRNA----PILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             h-----------CCCCEEEEcCCCCC--CC--CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEcc
Confidence            2           36799999999854  22  2232   23334443    45555666666655677787775

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.41  E-value=0.22  Score=46.99  Aligned_cols=116  Identities=17%  Similarity=0.231  Sum_probs=68.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|.|+|++|.+|.++|..|+..|  .++++++.+  +++...-+|....               ...++..  +. .+ +
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~---------------~~~~i~~--~~-~~-~   60 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHIN---------------TPAKVTG--YL-GP-E   60 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCC---------------CcceEEE--ec-CC-C
Confidence            68899999999999999999888  479999988  4443334443310               0011111  10 11 0


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++       .+.+..-|++|..||...  ++  ..+   =.+.++.|..-.    +...+.+.+....+.++++|-.
T Consensus        61 ~~-------y~~~~daDivvitaG~~~--k~--g~t---R~dll~~N~~i~----~~i~~~i~~~~p~a~vivvtNP  119 (310)
T cd01337          61 EL-------KKALKGADVVVIPAGVPR--KP--GMT---RDDLFNINAGIV----RDLATAVAKACPKALILIISNP  119 (310)
T ss_pred             ch-------HHhcCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHHHH----HHHHHHHHHhCCCeEEEEccCc
Confidence            11       122246899999999854  22  223   244566665544    4445555544456788887643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.38  E-value=0.14  Score=49.06  Aligned_cols=41  Identities=22%  Similarity=0.319  Sum_probs=36.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+++++|.|+ +++|..+++.+...|++|+++++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999999989999999999998876543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.38  E-value=0.082  Score=51.96  Aligned_cols=42  Identities=24%  Similarity=0.279  Sum_probs=37.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..+.||+++|.|. |.||+.+|+.+...|++|+++++++.+..
T Consensus       208 ~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        208 VLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            3578999999997 68999999999999999999999887643

>PLN02740 Alcohol dehydrogenase-like

Probab=95.35  E-value=0.066  Score=52.02  Aligned_cols=41  Identities=20%  Similarity=0.234  Sum_probs=35.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|.|+ +++|...++.+...|+ +|+++++++++++.+
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a  239 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG  239 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH
Confidence            4789999996 8999999998888998 699999988876544

>PRK08223 hypothetical protein; Validated

Probab=95.30  E-value=0.087  Score=48.89  Aligned_cols=40  Identities=20%  Similarity=0.224  Sum_probs=34.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +.+-+++..+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        20 e~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         20 TEQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HHHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4456788999999996 4999999999999995 78888875

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.26  E-value=0.098  Score=45.98  Aligned_cols=39  Identities=21%  Similarity=0.473  Sum_probs=32.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      .+..++.++|+|.|+ +|+|.++++.|+..|. ++.+++.+
T Consensus        15 ~Q~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          15 AQKRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            445677889999985 5699999999999996 58888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.25  E-value=0.083  Score=52.50  Aligned_cols=77  Identities=19%  Similarity=0.224  Sum_probs=58.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ...++++|.|+ |.+|+.+++.|.+.|++|+++++++++.++..++.                     ..+.++..|.++
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~---------------------~~~~~i~gd~~~  286 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL---------------------PNTLVLHGDGTD  286 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC---------------------CCCeEEECCCCC
Confidence            45789999998 89999999999999999999999988765443321                     235678899999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      .+.++++-      ..+.|.+|...
T Consensus       287 ~~~L~~~~------~~~a~~vi~~~  305 (453)
T PRK09496        287 QELLEEEG------IDEADAFIALT  305 (453)
T ss_pred             HHHHHhcC------CccCCEEEECC
Confidence            88765532      23578887543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.24  E-value=0.18  Score=44.35  Aligned_cols=38  Identities=24%  Similarity=0.478  Sum_probs=31.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +-.++..+|+|.|++ |+|.++++.|+..|. ++.+++.+
T Consensus        14 q~~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            345677899999866 599999999999996 58888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.24  E-value=0.065  Score=47.89  Aligned_cols=43  Identities=23%  Similarity=0.448  Sum_probs=37.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.++..++.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~   44 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKA   44 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHH
Confidence            5889999999999999999999999999999998877665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.23  E-value=0.73  Score=43.44  Aligned_cols=115  Identities=19%  Similarity=0.188  Sum_probs=73.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccC-ceeEEEeccCCCHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH-AKVAGIACDVCEPA  112 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~  112 (368)
                      |.|.|+ |.+|..+|..|+.+|.  ++++.+.++++++....+|.....-             .+ ..+....   .|.+
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~-------------~~~~~~~i~~---~~y~   64 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATAL-------------TYSTNTKIRA---GDYD   64 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhcc-------------CCCCCEEEEE---CCHH
Confidence            678898 8999999999998883  7999999988887777777652110             11 1233332   2333


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++           ..-|++|..||...  ++  ..+.+ -.+.++.|.    .+.+...|.+.+....+.++++|
T Consensus        65 ~~-----------~~aDivvitaG~~~--kp--g~tr~-R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          65 DC-----------ADADIIVITAGPSI--DP--GNTDD-RLDLAQTNA----KIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             Hh-----------CCCCEEEECCCCCC--CC--CCCch-HHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEec
Confidence            32           35799999999854  22  12211 123344444    46677777777765566666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.21  E-value=0.08  Score=51.04  Aligned_cols=41  Identities=24%  Similarity=0.221  Sum_probs=33.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+++|+|.|+ +++|..+++.+...|++|++++.+.++..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            5789999775 8999999998888999998888776654433

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.16  E-value=0.12  Score=48.67  Aligned_cols=42  Identities=21%  Similarity=0.316  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++++++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            468999999999999999999999999999999988775443

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.09  E-value=0.19  Score=47.15  Aligned_cols=116  Identities=19%  Similarity=0.267  Sum_probs=70.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-C-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG-D-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G-~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +.|.|+|+ |++|.++|..|+.++ . .+++.+.++++.+-...+|......             .... ..+..| .+.
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~-------------~~~~-~~i~~~-~~y   64 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAP-------------LGSD-VKITGD-GDY   64 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchh-------------ccCc-eEEecC-CCh
Confidence            36889999 999999999998877 3 7999999977766666666442110             0111 122223 223


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ..-|++|..||...  +|-  ++.   .+.++.|..=.-    .+.+.+.+....+.++.++
T Consensus        65 ~~~-----------~~aDiVvitAG~pr--KpG--mtR---~DLl~~Na~I~~----~i~~~i~~~~~d~ivlVvt  118 (313)
T COG0039          65 EDL-----------KGADIVVITAGVPR--KPG--MTR---LDLLEKNAKIVK----DIAKAIAKYAPDAIVLVVT  118 (313)
T ss_pred             hhh-----------cCCCEEEEeCCCCC--CCC--CCH---HHHHHhhHHHHH----HHHHHHHhhCCCeEEEEec
Confidence            332           26899999999865  222  233   345666665443    3444444443456666664

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.068  Score=49.63  Aligned_cols=43  Identities=16%  Similarity=0.314  Sum_probs=37.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      ..+++||+++|.|.|.-+|+-++..|.++|++|.++.++...+
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l  195 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM  195 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH
Confidence            3478999999999999999999999999999999998865443

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.06  E-value=0.089  Score=49.36  Aligned_cols=42  Identities=17%  Similarity=0.109  Sum_probs=36.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++.+++|.|+++++|.++++.+...|++|+++.++.++.+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~  180 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL  180 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            478999999999999999999999999999998887765433

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.06  E-value=0.16  Score=47.82  Aligned_cols=31  Identities=23%  Similarity=0.532  Sum_probs=26.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            4788886 7999999999999995 68888764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.04  E-value=0.11  Score=50.34  Aligned_cols=38  Identities=34%  Similarity=0.338  Sum_probs=32.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      .+++++|.|+ +++|...++.....|++|++++++.++.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~  215 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKE  215 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHh
Confidence            5789999986 8999999998889999999998876553

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.04  E-value=0.1  Score=48.92  Aligned_cols=41  Identities=20%  Similarity=0.210  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++.+++|.|+++++|.++++.+...|++|+++.++.++.+.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  178 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE  178 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHH
Confidence            57899999999999999999999999999999988776543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.03  E-value=0.13  Score=47.75  Aligned_cols=40  Identities=28%  Similarity=0.380  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ++++++|+|+++++|.++++.+...|++|+.++++.++.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~  178 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA  178 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999999999876644

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.02  E-value=0.66  Score=43.78  Aligned_cols=113  Identities=20%  Similarity=0.248  Sum_probs=68.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .+.|.|+ |.+|..+|..|+.+|  .+|+++++++++.+....++.....              .........   .|.+
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--------------~~~~~~i~~---~d~~   63 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--------------FVKPVRIYA---GDYA   63 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--------------ccCCeEEee---CCHH
Confidence            4888997 789999999999999  5899999998877655555543110              001111121   2222


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           ....|++|.++|...  .+  ..+   ..+.+..|..    +.+.+.+.+.+....|.+++++
T Consensus        64 ~-----------l~~aDiViita~~~~--~~--~~~---r~dl~~~n~~----i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          64 D-----------CKGADVVVITAGANQ--KP--GET---RLDLLKRNVA----IFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             H-----------hCCCCEEEEccCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEec
Confidence            2           236899999999753  21  122   2334444443    4455555555554567777774

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.02  E-value=0.11  Score=49.99  Aligned_cols=40  Identities=20%  Similarity=0.259  Sum_probs=34.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      +|.+|+|.|+ +++|...++.+...|+ +|++++++.++.+.
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~  227 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQ  227 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            5789999985 8999999988888998 79999999877654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK07877 hypothetical protein; Provisional

Probab=95.00  E-value=0.11  Score=54.45  Aligned_cols=39  Identities=23%  Similarity=0.345  Sum_probs=33.6

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~   66 (368)
                      +.+.+++.++|+|.|+  |+|..++..|+..|.  ++++++.+
T Consensus       100 ~~Q~~L~~~~V~IvG~--GlGs~~a~~LaraGvvG~l~lvD~D  140 (722)
T PRK07877        100 EEQERLGRLRIGVVGL--SVGHAIAHTLAAEGLCGELRLADFD  140 (722)
T ss_pred             HHHHHHhcCCEEEEEe--cHHHHHHHHHHHccCCCeEEEEcCC
Confidence            4466788999999999  499999999999994  89998875

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.99  E-value=0.17  Score=47.88  Aligned_cols=42  Identities=19%  Similarity=0.332  Sum_probs=37.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+.+++|.|+++.+|.++++.+...|++|+.++++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999999988776543

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.96  E-value=0.098  Score=48.47  Aligned_cols=41  Identities=20%  Similarity=0.247  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++++++|.|+++++|.++++.+...|++|+.++++.++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999999999999999988776543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.92  E-value=0.022  Score=50.46  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=33.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .+++||.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4688999999995 47999999999999999999987654

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.92  E-value=0.14  Score=48.14  Aligned_cols=42  Identities=24%  Similarity=0.337  Sum_probs=36.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++.+++|+|+++++|.++++.+...|++++++.++.++.+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            468999999999999999999999999988888887765543

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.92  E-value=0.093  Score=50.41  Aligned_cols=41  Identities=17%  Similarity=0.324  Sum_probs=34.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~~   73 (368)
                      .+++++|.|+ +++|...++.+...|++ |+.+++++++.+.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~  217 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA  217 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999985 89999999888889985 88888988776543

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.91  E-value=0.12  Score=49.92  Aligned_cols=40  Identities=18%  Similarity=0.321  Sum_probs=33.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .+++|+|+|+ +++|..+++.+...|+ +|+++++++++++.
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~  231 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLAL  231 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHH
Confidence            4789999985 8999999888888998 69999998887653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.91  E-value=0.1  Score=48.72  Aligned_cols=76  Identities=26%  Similarity=0.225  Sum_probs=54.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC-C
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC-E  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~-~  110 (368)
                      .|+++.|+|+++ ||.--++.--+.|++|++++++..+-+++.+.|-+                    +.   -.|.+ |
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGA--------------------d~---fv~~~~d  236 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGA--------------------DV---FVDSTED  236 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCc--------------------ce---eEEecCC
Confidence            799999999987 99776666667899999999998777777766532                    22   23566 7


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEc
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINN  134 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~n  134 (368)
                      ++.++++.+..   .+.+|.++|-
T Consensus       237 ~d~~~~~~~~~---dg~~~~v~~~  257 (360)
T KOG0023|consen  237 PDIMKAIMKTT---DGGIDTVSNL  257 (360)
T ss_pred             HHHHHHHHHhh---cCcceeeeec
Confidence            77777766543   2345555544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.90  E-value=0.03  Score=43.71  Aligned_cols=38  Identities=24%  Similarity=0.294  Sum_probs=32.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +++++|++||.|+ |.+|..-++.|++.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4789999999997 7899999999999999999999986

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.89  E-value=0.18  Score=47.01  Aligned_cols=41  Identities=24%  Similarity=0.305  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++.+++|.|+++++|.++++.....|++|+.+.+++++.+.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  182 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAAL  182 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            47899999999999999999999999999999988766543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.83  E-value=0.074  Score=49.24  Aligned_cols=43  Identities=21%  Similarity=0.240  Sum_probs=36.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTE   76 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~   76 (368)
                      +|+++|.|+ ||-+++++..|++.|+ +|.+++|+.++.+++.++
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            578999995 8999999999999997 599999999887765543

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.81  E-value=0.8  Score=43.06  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=35.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ++|.|.|+ |-+|..+|..++..|. +|++.++++++++....++.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~   47 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIA   47 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHH
Confidence            57899998 8899999999999875 99999998887655444443

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.80  E-value=0.11  Score=49.54  Aligned_cols=40  Identities=13%  Similarity=0.250  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      ++++++|+|+ +++|..+++.+...|+ +|++++++.++.+.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~  212 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARREL  212 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            4789999985 7999999999999999 78888888877653

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.78  E-value=0.14  Score=48.55  Aligned_cols=41  Identities=27%  Similarity=0.295  Sum_probs=36.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++.+++|.|+++++|.++++.+.+.|++|+.+.+++++.+.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~  205 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLEL  205 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence            47899999999999999999999999999999999876543

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.75  E-value=0.19  Score=49.34  Aligned_cols=42  Identities=17%  Similarity=0.105  Sum_probs=34.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~---~Vil~~R~~~~~~~~   73 (368)
                      .|.+++|.|+++++|...++.+...|+   +|++++++.++++.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            468999999999999998877666654   799999998887654

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.73  E-value=0.094  Score=44.32  Aligned_cols=43  Identities=26%  Similarity=0.298  Sum_probs=32.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      +..+.||+++|.| =|-+|+.+|+.|...|++|+++..++-++-
T Consensus        18 ~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~al   60 (162)
T PF00670_consen   18 NLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRAL   60 (162)
T ss_dssp             -S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHH
T ss_pred             ceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHH
Confidence            4567899999999 568999999999999999999999986654

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.72  E-value=0.36  Score=45.00  Aligned_cols=47  Identities=21%  Similarity=0.308  Sum_probs=40.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHh
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL   81 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~   81 (368)
                      ++|.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.+.+..
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~~~   52 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEKSL   52 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHH
Confidence            57888886 689999999999999999999999999888777766544

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.72  E-value=0.4  Score=45.71  Aligned_cols=39  Identities=18%  Similarity=0.216  Sum_probs=35.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   69 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~   69 (368)
                      .+.|+++.|.|. |.||+++|+.|...|++|++.+|+.+.
T Consensus       143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            678999999985 579999999999999999999998754

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.72  E-value=0.19  Score=48.20  Aligned_cols=34  Identities=29%  Similarity=0.394  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      .+++|+|+|+ |++|...++.+...|++|++++|+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5789999986 899999998888899999999984

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=94.72  E-value=0.087  Score=48.72  Aligned_cols=79  Identities=22%  Similarity=0.286  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|.|++|++|++..|.-..+--.-+|++|+.++-..+|.+-+.+++.-                   .    ...|..+.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf-------------------D----~~idyk~~  206 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF-------------------D----AGIDYKAE  206 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC-------------------c----eeeecCcc
Confidence            489999999999999876665556899999999999987766555421                   1    12344444


Q ss_pred             HHHHHHHHHHHhHc-CCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEF-GSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~-g~iD~li~nAG~  137 (368)
                       ++.+   .+.+.. ..||+.+-|.|.
T Consensus       207 -d~~~---~L~~a~P~GIDvyfeNVGg  229 (340)
T COG2130         207 -DFAQ---ALKEACPKGIDVYFENVGG  229 (340)
T ss_pred             -cHHH---HHHHHCCCCeEEEEEcCCc
Confidence             2322   233333 359999999985

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.67  E-value=0.18  Score=47.42  Aligned_cols=41  Identities=22%  Similarity=0.305  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++.+++|.|+++++|.++++.....|++|+.+.++.++.+.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEF  179 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHH
Confidence            57899999999999999999888999999999988776543

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02827 Alcohol dehydrogenase-like

Probab=94.67  E-value=0.16  Score=49.24  Aligned_cols=39  Identities=23%  Similarity=0.287  Sum_probs=32.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~   71 (368)
                      +|++|+|.|+ +++|..+++.+...|++ |+++++++++.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~  232 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAE  232 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence            5889999985 89999999988889985 777787877654

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=94.66  E-value=0.12  Score=48.75  Aligned_cols=41  Identities=29%  Similarity=0.394  Sum_probs=32.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +++++++||++++|..+++.....|++|+.+++++++.+.+
T Consensus       144 ~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~  184 (324)
T cd08291         144 AKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL  184 (324)
T ss_pred             CcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            35555569999999999988778899999999988765543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=94.58  E-value=0.087  Score=46.51  Aligned_cols=38  Identities=26%  Similarity=0.283  Sum_probs=34.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +++++|.++|.|| |.+|...++.|.+.|++|++++++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5789999999997 7899999999999999999998764

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.58  E-value=0.13  Score=50.94  Aligned_cols=41  Identities=32%  Similarity=0.423  Sum_probs=35.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   75 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~   75 (368)
                      ++.|.||.|++|.++++.|.+.|++|++.+|+++...+...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            68999999999999999999999999999999876544433

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.57  E-value=0.19  Score=47.74  Aligned_cols=35  Identities=20%  Similarity=0.330  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      ++.+++|+|+++++|.++++.....|++|+.+.++
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            48999999999999999999999999999888765

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.51  E-value=0.28  Score=47.07  Aligned_cols=39  Identities=31%  Similarity=0.400  Sum_probs=33.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~   71 (368)
                      .+++++|+| ++++|.++++.+...|+ +|+++++++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            688999997 59999999998889999 9999988877654

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.49  E-value=0.075  Score=43.19  Aligned_cols=95  Identities=18%  Similarity=0.182  Sum_probs=54.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      -++-|.|+ |-+|.++++.|.+.|++|..+ +|+.+..+++...+......         .....-.+...+-+-+.| +
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~---------~~~~~~~~aDlv~iavpD-d   79 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAIL---------DLEEILRDADLVFIAVPD-D   79 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT--------------TTGGGCC-SEEEE-S-C-C
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccc---------ccccccccCCEEEEEech-H
Confidence            47889997 679999999999999998766 67766666555444221000         000011233444555566 4


Q ss_pred             HHHHHHHHHHhH--cCCCCEEEEccCCCC
Q 017635          113 DVQKLSNFAVNE--FGSIDIWINNAGTNK  139 (368)
Q Consensus       113 ~v~~~~~~i~~~--~g~iD~li~nAG~~~  139 (368)
                      .+..+++++...  +.+=.+++|+.|-..
T Consensus        80 aI~~va~~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   80 AIAEVAEQLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence            788888888765  333469999999754

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.48  E-value=0.28  Score=46.19  Aligned_cols=44  Identities=20%  Similarity=0.247  Sum_probs=37.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ++|.|.| .|-+|.++|..|+++|++|++.+|+++..+...+.+.
T Consensus         3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~   46 (308)
T PRK06129          3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIA   46 (308)
T ss_pred             cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHH
Confidence            4688999 6679999999999999999999999887776655443

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.43  E-value=0.12  Score=39.29  Aligned_cols=40  Identities=38%  Similarity=0.527  Sum_probs=33.0

Q ss_pred             EEEEcCCChHHHHHHHHHHHCC---CeEEEE-eCChHHHHHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSG---DRVVVA-SRSSESVRMTVTE   76 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G---~~Vil~-~R~~~~~~~~~~~   76 (368)
                      +.|. |+|.+|.++++.|++.|   .+|.+. +|++++.++..++
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~   45 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKE   45 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHH
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHh
Confidence            3444 67899999999999999   899965 9999988776655

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.42  E-value=0.082  Score=49.37  Aligned_cols=44  Identities=20%  Similarity=0.252  Sum_probs=38.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..+++||+++|.|.++-+|+.+|..|+++|++|.++.|+...++
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~  197 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK  197 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH
Confidence            34789999999999999999999999999999999977665443

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.093  Score=48.82  Aligned_cols=43  Identities=19%  Similarity=0.344  Sum_probs=37.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      ..+++||+++|.|+++-.|+.++..|+++|++|.++.|....+
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L  196 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL  196 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence            3478999999999988899999999999999999998854433

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.34  E-value=0.21  Score=48.70  Aligned_cols=40  Identities=28%  Similarity=0.298  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ++.+++|+|+++++|.++++.+...|+++++++++.++.+
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~  228 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAE  228 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            4689999999999999999988899999988888776554

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.33  E-value=0.31  Score=47.19  Aligned_cols=41  Identities=12%  Similarity=0.221  Sum_probs=34.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      ++.+++|.| .+++|.++++.+...|+ +|++++++.++.+.+
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a  231 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA  231 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            368999996 58999999999999998 799999988776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.29  E-value=0.3  Score=47.04  Aligned_cols=41  Identities=12%  Similarity=0.194  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|.+++|.|+ +++|..+++.+...|+ +|+.++++.++.+.+
T Consensus       184 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~  225 (365)
T cd08277         184 PGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA  225 (365)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            4789999975 8999999998888998 799999988776543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.25  E-value=0.22  Score=47.19  Aligned_cols=41  Identities=27%  Similarity=0.306  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+++++|.| ++++|.++++.+...|++|+.+++++++.+.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~  203 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA  203 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Confidence            478999999 79999999999889999999999987765533

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PLN02928 oxidoreductase family protein

Probab=94.23  E-value=0.15  Score=49.02  Aligned_cols=38  Identities=24%  Similarity=0.248  Sum_probs=34.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ..+.||++.|.|- |.||+++|+.|...|++|+..+|+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~  192 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSW  192 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCC
Confidence            3688999999995 7899999999999999999999874

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.18  E-value=0.26  Score=47.98  Aligned_cols=74  Identities=20%  Similarity=0.245  Sum_probs=52.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +.+.|+++|+|++ -+|+.+++.+.+.|++|++++.++......   +                     .+ .++..|..
T Consensus         9 ~~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~---------------------ad-~~~~~~~~   62 (395)
T PRK09288          9 SPSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V---------------------AH-RSHVIDML   62 (395)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h---------------------hh-heEECCCC
Confidence            3356799999976 589999999999999999999876431110   0                     00 13567888


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINN  134 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~n  134 (368)
                      |.+.+.+++++     .++|.++..
T Consensus        63 d~~~l~~~~~~-----~~id~vi~~   82 (395)
T PRK09288         63 DGDALRAVIER-----EKPDYIVPE   82 (395)
T ss_pred             CHHHHHHHHHH-----hCCCEEEEe
Confidence            88777776653     268988854

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.18  E-value=0.19  Score=46.53  Aligned_cols=39  Identities=28%  Similarity=0.326  Sum_probs=33.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~   71 (368)
                      .+++++|.|+ +++|..+++.+...|++ |+++++++++++
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            6889999986 79999999988889987 888888877654

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=94.14  E-value=0.28  Score=44.04  Aligned_cols=45  Identities=16%  Similarity=0.144  Sum_probs=38.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      .++.|++||=.|+++|   -+++.+|+.|++|..++-+++..+.+...
T Consensus        56 ~~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~h  100 (243)
T COG2227          56 FDLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLH  100 (243)
T ss_pred             cCCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHh
Confidence            3478999999999999   68999999999999999998887655433

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=94.12  E-value=0.24  Score=44.80  Aligned_cols=94  Identities=17%  Similarity=0.230  Sum_probs=63.0

Q ss_pred             HhccccccccccCCC-CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           18 MVGANMVLEEHCKAG-PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        18 ~~~~~~~~~~~~~~~-~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      .+++.|.+..-.+.+ |.+|||--|.||.|..+++.+-..|+++|.+..+.++.+.+.+.                    
T Consensus       131 ~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken--------------------  190 (336)
T KOG1197|consen  131 GLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN--------------------  190 (336)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc--------------------
Confidence            344555565555554 78999999999999999999999999999998888776543221                    


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                       +..   +..|.+.++-+++..+ +-+ -..+|++.-..|.
T Consensus       191 -G~~---h~I~y~~eD~v~~V~k-iTn-gKGVd~vyDsvG~  225 (336)
T KOG1197|consen  191 -GAE---HPIDYSTEDYVDEVKK-ITN-GKGVDAVYDSVGK  225 (336)
T ss_pred             -CCc---ceeeccchhHHHHHHh-ccC-CCCceeeeccccc
Confidence             111   3446666555544433 211 1258988877664

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.10  E-value=0.52  Score=42.58  Aligned_cols=31  Identities=26%  Similarity=0.480  Sum_probs=26.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            367777 66999999999999995 68888875

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.09  E-value=0.093  Score=44.42  Aligned_cols=44  Identities=23%  Similarity=0.361  Sum_probs=34.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .+++||+++|.|.|.-+|+-++..|.++|+.|.++....+.+++
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            46899999999999999999999999999999998776655443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=94.04  E-value=1.9  Score=37.65  Aligned_cols=76  Identities=12%  Similarity=0.047  Sum_probs=50.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .++++||-.|++.|.   .+..|+++|++|+.++.+++.++.+.+.....                .-..+.+...|+.+
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~----------------~~~~v~~~~~d~~~   89 (197)
T PRK11207         29 VKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAE----------------NLDNLHTAVVDLNN   89 (197)
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc----------------CCCcceEEecChhh
Confidence            356889999998876   46778889999999999987766554443321                11235566666543


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ..        .   .+..|+++.+..
T Consensus        90 ~~--------~---~~~fD~I~~~~~  104 (197)
T PRK11207         90 LT--------F---DGEYDFILSTVV  104 (197)
T ss_pred             CC--------c---CCCcCEEEEecc
Confidence            21        1   136899987754

>PRK14851 hypothetical protein; Provisional

Probab=94.03  E-value=0.39  Score=50.19  Aligned_cols=40  Identities=23%  Similarity=0.296  Sum_probs=33.3

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +.+-++++++|+|.| .||+|..++..|+..|. ++.+++.+
T Consensus        36 e~Q~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D   76 (679)
T PRK14851         36 GEQERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFD   76 (679)
T ss_pred             HHHHHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCC
Confidence            345678899999999 56999999999999995 67787754

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.03  E-value=0.4  Score=46.66  Aligned_cols=42  Identities=26%  Similarity=0.287  Sum_probs=36.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++.+++|+|+++++|.++++.+...|+++++++++.++.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~  234 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC  234 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence            478999999999999999988889999999898888776543

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK14967 putative methyltransferase; Provisional

Probab=94.01  E-value=1.8  Score=38.63  Aligned_cols=76  Identities=21%  Similarity=0.137  Sum_probs=49.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++.++|-.|+++|.   ++..+++.|. +|+.++.++..++.+.+.+..                 .+.++.++..|+.+
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~-----------------~~~~~~~~~~d~~~   95 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALL-----------------AGVDVDVRRGDWAR   95 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHH-----------------hCCeeEEEECchhh
Confidence            35789999987754   3445555675 899999999877655544432                 12356667777643


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      .      .     ..+..|++|.|....
T Consensus        96 ~------~-----~~~~fD~Vi~npPy~  112 (223)
T PRK14967         96 A------V-----EFRPFDVVVSNPPYV  112 (223)
T ss_pred             h------c-----cCCCeeEEEECCCCC
Confidence            1      1     114799999998654

>PRK14030 glutamate dehydrogenase; Provisional

Probab=93.98  E-value=1.7  Score=43.05  Aligned_cols=34  Identities=21%  Similarity=0.197  Sum_probs=31.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA   63 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~   63 (368)
                      .+++|++|+|-| .|.+|..+|+.|.+.|++|+.+
T Consensus       224 ~~l~g~~vaIQG-fGnVG~~aA~~L~e~GakvVav  257 (445)
T PRK14030        224 IDIKGKTVAISG-FGNVAWGAATKATELGAKVVTI  257 (445)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEE
Confidence            478999999999 6899999999999999999984

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=93.95  E-value=0.7  Score=44.93  Aligned_cols=117  Identities=14%  Similarity=0.123  Sum_probs=72.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-Ce----EEE----EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSG-DR----VVV----ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G-~~----Vil----~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +-+|.|+|++|.+|.++|..++..| +.    |.+    ++++.++++...-+|......             ...++..
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~-------------~~~~v~i  110 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYP-------------LLREVSI  110 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhh-------------hcCceEE
Confidence            4589999999999999999999887 33    444    488999888888887653210             0012211


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  182 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  182 (368)
                       ..  .+.+++           ..-|++|..||...  ++  ..+   -.+.++.|..    +.+...+.+.+. +..+.
T Consensus       111 -~~--~~y~~~-----------kdaDIVVitAG~pr--kp--g~t---R~dll~~N~~----I~k~i~~~I~~~a~~~~i  165 (387)
T TIGR01757       111 -GI--DPYEVF-----------EDADWALLIGAKPR--GP--GME---RADLLDINGQ----IFADQGKALNAVASKNCK  165 (387)
T ss_pred             -ec--CCHHHh-----------CCCCEEEECCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeE
Confidence             11  222222           36899999999853  22  223   2345555654    445555666552 24566


Q ss_pred             EEEEc
Q 017635          183 IFNMD  187 (368)
Q Consensus       183 Iv~is  187 (368)
                      |+++|
T Consensus       166 viVVs  170 (387)
T TIGR01757       166 VLVVG  170 (387)
T ss_pred             EEEcC
Confidence            66664

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=93.91  E-value=0.47  Score=38.05  Aligned_cols=29  Identities=24%  Similarity=0.397  Sum_probs=25.8

Q ss_pred             hHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           44 GLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        44 GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      |+|...++-+...|++|+++++++++.+.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~   29 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLEL   29 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHH
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHH
Confidence            68999999999999999999999887654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=93.90  E-value=0.34  Score=46.16  Aligned_cols=40  Identities=23%  Similarity=0.326  Sum_probs=33.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~   72 (368)
                      .+++++|+|+ +++|..+++.+...|++ |+.+++++++.+.
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~  200 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLAL  200 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence            5789999975 99999999988899997 6788888877653

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=93.83  E-value=0.33  Score=45.98  Aligned_cols=37  Identities=19%  Similarity=0.236  Sum_probs=33.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ++++++|.|+++++|.++++.+...|++|+.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5789999999999999999999999999998887763

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.81  E-value=0.21  Score=46.36  Aligned_cols=42  Identities=29%  Similarity=0.374  Sum_probs=36.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      .+++||+|+|.|.|.-+|+-+|..|.++|+.|.++......+
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l  194 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL  194 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH
Confidence            478999999999999999999999999999999886554443

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=93.77  E-value=1.2  Score=41.84  Aligned_cols=27  Identities=33%  Similarity=0.466  Sum_probs=23.6

Q ss_pred             HHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           45 LGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        45 IG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      =|..+|++|++.|+.|++.+|++++.+
T Consensus        31 gGspMArnLlkAGheV~V~Drnrsa~e   57 (341)
T TIGR01724        31 GGSRMAIEFAMAGHDVVLAEPNREFMS   57 (341)
T ss_pred             CHHHHHHHHHHCCCEEEEEeCChhhhh
Confidence            378999999999999999999887653

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>smart00829 PKS_ER Enoylreductase

Probab=93.73  E-value=0.29  Score=44.48  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++.+++|.|+++++|..+++.+...|++|+.++++.++.+.+
T Consensus       104 ~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  145 (288)
T smart00829      104 PGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFL  145 (288)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            578999999999999999988888999999999988776543

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=93.67  E-value=0.48  Score=43.87  Aligned_cols=83  Identities=23%  Similarity=0.256  Sum_probs=56.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .-+|++++|.||+|..|.-.-+--.-.|++|+..+-+.++..-+..++.-                   .    ...|.-
T Consensus       151 pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~-------------------d----~afNYK  207 (343)
T KOG1196|consen  151 PKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGF-------------------D----DAFNYK  207 (343)
T ss_pred             CCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCC-------------------c----cceecc
Confidence            34689999999999999765544445799999999888887654443211                   1    123444


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      ++.++.+++.+...+  .||+.+-|.|.
T Consensus       208 ~e~~~~~aL~r~~P~--GIDiYfeNVGG  233 (343)
T KOG1196|consen  208 EESDLSAALKRCFPE--GIDIYFENVGG  233 (343)
T ss_pred             CccCHHHHHHHhCCC--cceEEEeccCc
Confidence            554666666554222  59999999985

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=93.65  E-value=2.2  Score=40.02  Aligned_cols=114  Identities=15%  Similarity=0.246  Sum_probs=64.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      |.|.|+ |.+|..+|..|+.+|. +|++.+++++.++....++......             ...... +.. -+|.+++
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~-------------~~~~~~-I~~-t~d~~~l   64 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPI-------------LGSDTK-VTG-TNDYEDI   64 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhh-------------cCCCeE-EEE-cCCHHHh
Confidence            468898 7899999999998875 9999999977654333333321100             011111 111 1222221


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                                 ..-|++|.++|...  .+  ..+..   ..+.-|    +.+.+.+.+.|.+....+.+++++
T Consensus        65 -----------~dADiVIit~g~p~--~~--~~~r~---e~~~~n----~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          65 -----------AGSDVVVITAGIPR--KP--GMSRD---DLLGTN----AKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             -----------CCCCEEEEecCCCC--Cc--CCCHH---HHHHHH----HHHHHHHHHHHHHHCCCeEEEEec
Confidence                       25799999999753  22  22222   223333    345566667666654556666664

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=93.60  E-value=1.7  Score=40.85  Aligned_cols=112  Identities=17%  Similarity=0.210  Sum_probs=69.9

Q ss_pred             EEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           38 ITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        38 ITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |.|+ |.+|..+|..|+..+  .++++.+++.++++....+|.....-             ....+....   .+.+++ 
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~i~~---~~~~~~-   62 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASF-------------LPTPKKIRS---GDYSDC-   62 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcc-------------cCCCeEEec---CCHHHH-
Confidence            3464 889999999999888  36999999988888877777653110             111222221   233222 


Q ss_pred             HHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          116 KLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                                ..-|++|..||...  ++  ..+.   ...++.|..    +.+.+.+.+.+....+.++++|-
T Consensus        63 ----------~daDivVitag~~r--k~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsN  114 (299)
T TIGR01771        63 ----------KDADLVVITAGAPQ--KP--GETR---LELVGRNVR----IMKSIVPEVVKSGFDGIFLVATN  114 (299)
T ss_pred             ----------CCCCEEEECCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCC
Confidence                      36799999999854  22  2333   344555554    44555566655555777877753

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=93.58  E-value=0.32  Score=45.18  Aligned_cols=71  Identities=20%  Similarity=0.244  Sum_probs=52.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ...++++..| |+-+|+++|-++-+.|..|+.++|-...-.--.                         .-..+..|+.|
T Consensus        10 ~~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqV-------------------------Ahrs~Vi~MlD   63 (394)
T COG0027          10 PQATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQV-------------------------AHRSYVIDMLD   63 (394)
T ss_pred             CCCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhh-------------------------hhheeeeeccC
Confidence            3456677777 789999999999999999999999654321111                         11235679999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEE
Q 017635          111 PADVQKLSNFAVNEFGSIDIWI  132 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li  132 (368)
                      .+.++.++++-     ++|.+|
T Consensus        64 ~~al~avv~re-----kPd~IV   80 (394)
T COG0027          64 GDALRAVVERE-----KPDYIV   80 (394)
T ss_pred             HHHHHHHHHhh-----CCCeee
Confidence            99999988764     567665

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	368
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		6e-15
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		2e-14
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		8e-14
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		4e-13
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		1e-12
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-12
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-12
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		4e-12
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-12
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		5e-12
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		9e-12
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		1e-11
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		2e-11
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		2e-11
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-11
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-11
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		3e-11
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-11
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		4e-11
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		7e-11
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		9e-11
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		9e-11
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-10
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-10
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-10
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-10
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-10
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-10
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		3e-10
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-10
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		4e-10
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-10
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		6e-10
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		7e-10
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		7e-10
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-10
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-10
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		1e-09
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-09
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-09
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-09
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-09
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-09
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		4e-09
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-09
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-09
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		6e-09
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		7e-09
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		9e-09
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-08
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		1e-08
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-08
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		2e-08
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		2e-08
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		3e-08
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-08
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		4e-08
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		4e-08
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		7e-08
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		8e-08
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		8e-08
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		8e-08
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		1e-07
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		1e-07
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-07
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		1e-07
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		1e-07
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-07
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		2e-07
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-07
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-07
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		2e-07
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		3e-07
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-07
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-07
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		4e-07
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		4e-07
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-07
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-07
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-07
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-07
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-07
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		4e-07
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-07
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		5e-07
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-07
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-07
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		6e-07
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		6e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		6e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		7e-07
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		8e-07
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-06
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-06
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-06
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-06
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-06
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		3e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-06
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-06
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-06
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		5e-06
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		5e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-06
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		7e-06
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		9e-06
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-05
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-05
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		3e-05
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-05
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-05
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		4e-05
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		4e-05
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		5e-05
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		5e-05
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		5e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		5e-05
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		6e-05
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		7e-05
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		7e-05
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		7e-05
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		7e-05
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		7e-05
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		8e-05
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-04
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-04
3l6e_A	235	Crystal Structure Of Putative Short Chain Dehydroge		2e-04
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		2e-04
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-04
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-04
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-04
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		3e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		4e-04

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 2/113 (1%)
Query: 104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 163
           +  DV +P  V+ L    V +FG +D+  NNAGT     P    T  + +Q+V TNL G 
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGP 138
Query: 164 ILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            LCT+EA RV + Q P+GG I N +G+ S  S  P +A Y +TK  +  L  S
Sbjct: 139 FLCTQEAFRVXKAQEPRGGRIIN-NGSISATSPRPYSAPYTATKHAITGLTKS 190

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 21/207 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGS+RGLGKA+A +    G+              ++    E  K    AAG    
Sbjct: 6   KTAIVTGSSRGLGKAIAWKL---GNMGANIVLNGSPASTSLDATAEEFK----AAG---- 54
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
            N+V AK      DV  P DV+ +   A++ FG IDI +NNAG  +    +L+ + ++ +
Sbjct: 55  INVVVAK-----GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRD-TLMLKMSEKDWD 108
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 212
            +++TNL  + LCT+   ++M  Q K G I N+   AG  G++    A Y ++K GL   
Sbjct: 109 DVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINITSIAGIIGNAG--QANYAASKAGLIGF 165
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             S+ KE     +  +  +PG++ TD+
Sbjct: 166 TKSIAKEFAAKGIYCNAVAPGIIKTDM 192

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 6/157 (3%)
Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
           G    N+V A    + CDV +P  V  L      EF  +D+ +NNAG+N    PL + T 
Sbjct: 78  GGRTGNIVRA----VVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTF 133
Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
           E+   IV+ NL G+ LCT+ A R  + Q P+GG I N +G+ S  +  P +A Y +TK  
Sbjct: 134 EQWNGIVAANLTGAFLCTQHAFRXXKAQTPRGGRIIN-NGSISAQTPRPNSAPYTATKHA 192
Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
           +  L  S   + +   +       G   TD     ST
Sbjct: 193 ITGLTKSTALDGRXHDIACGQIDIGNAATDXTARXST 229

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 98/226 (43%), Gaps = 34/226 (15%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+AR F  +GD             + +T       EG +A      
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGD------------KVAITYRSGEPPEGFLA------ 63
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     + CD+ +   V++         G +++ I NAG  K  + L++ + E+  
Sbjct: 64  ----------VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKD-QLLMRMSEEDFT 112
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +V TNL G+    + A R M    KG  +      G  GS+    A Y ++K GL    
Sbjct: 113 SVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAG--QANYAASKAGLVGFA 170
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            SL +E     +  +  +PG V TD+      + ++Q  NI+ ++P
Sbjct: 171 RSLARELGSRNITFNVVAPGFVDTDMT---KVLTDEQRANIVSQVP 213

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G+A+A +    G                V +  + L    +A         
Sbjct: 8   LVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIA--------- 58
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                  +  DV    DV  +    V+ FG +DI +NNAG  K    L++   EE + ++
Sbjct: 59  -------VRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWDTVI 110
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           +TNL G  LCT+   R M  Q + G I N+  +  G +  P  A Y + K G+  L  + 
Sbjct: 111 NTNLKGVFLCTKAVSRFMMRQ-RHGRIVNI-ASVVGVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
            KE     + V+  +PG + TD+
Sbjct: 169 AKELASRNITVNAIAPGFIATDM 191

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 22/208 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG +RGLG  +A+    +G               +V     NL+E   AA   ++
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAG--------------CSVVVASRNLEEASEAAQKLTE 67
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           K  V        CDV    +V+KL      +FG +D  +N AG N+   P  +F  +E  
Sbjct: 68  KYGVE--TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR-HPAEEFPLDEFR 124
Query: 154 QIVSTNLVGSILCTREAMRVMR--DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
           Q++  NL G+    REA  ++R  D P    I N+        + P  + Y ++K G+  
Sbjct: 125 QVIEVNLFGTYYVCREAFSLLRESDNP---SIINIGSLTVEEVTMPNISAYAASKGGVAS 181
Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L  +L KE  R  + V+  +PG   T +
Sbjct: 182 LTKALAKEWGRYGIRVNVIAPGWYRTKM 209

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           ++ITG+ +G+G+A+A EF  +                T  +LE+   E   A G  +   
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLE-CRAEGALTDT- 62
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   I  D+ + ADV++L+   V  +G ID  +NNAG  + F  L   T E+ +  
Sbjct: 63  --------ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYT 113
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++TNL G+   T+    +M  Q   GHIF +    +  +    +++Y  +K G R L  +
Sbjct: 114 MNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAFRH-SSIYCMSKFGQRGLVET 171
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           +   +++  V +    PG V T +
Sbjct: 172 MRLYARKCNVRITDVQPGAVYTPM 195

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGS RGLG A A     +G               +V  L             + K
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTL-------------TRK 56
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
               H    G+A DV +   ++   +    E   +DI INNAG     KP+++   E  +
Sbjct: 57  GYDAH----GVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR-KPMVELELENWQ 111
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ TNL  + L +R A + M  +  GG I N+ G+ +  ++ P  A Y + K G++ L 
Sbjct: 112 KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI-GSLTSQAARPTVAPYTAAKGGIKMLT 170
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 251
            S+  E  +  +  +   PG +LTD  ++ + I++KQ 
Sbjct: 171 CSMAAEWAQFNIQTNAIGPGYILTD--MNTALIEDKQF 206

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 21/222 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G A+A      G                     E +   + AAGG      
Sbjct: 31  IVTGASRGIGAAIAARLASDGFTVVINYAGKAAAA-------EEVAGKIEAAGG------ 77
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K      DV +PA V++L   A   FG +D+ +NNAG       + +  +   ++++
Sbjct: 78  ---KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXP-LTTIAETGDAVFDRVI 133
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + NL G+    REA + +R    GG I N       G   P   +Y + K G+      L
Sbjct: 134 AVNLKGTFNTLREAAQRLR---VGGRIINXS-TSQVGLLHPSYGIYAAAKAGVEAXTHVL 189
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL 258
            KE +   + V+  +PG   TDL L G + + +  F  +  L
Sbjct: 190 SKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPL 231

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G+A+A      G              +  T   EN        G  +  + 
Sbjct: 9   LVTGASRGIGRAIAETLAARG------------AKVIGTATSEN--------GAQAISDY 48
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           + A   G+  +V +PA ++ +      EFG +DI +NNAG  +    L++  +EE   I+
Sbjct: 49  LGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDII 107
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQL 212
            TNL      ++  MR M  + + G I  +       G+GG +      Y + K GL   
Sbjct: 108 ETNLSSVFRLSKAVMRAMM-KKRHGRIITIGSVVGTMGNGGQAN-----YAAAKAGLIGF 161
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
             SL +E     + V+  +PG + TD+  +   + + Q   I+ ++P
Sbjct: 162 SKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVP 205

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 25/234 (10%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           ++ITG++ G+G+ +ARE  ++G                 TE+ +        AGG++   
Sbjct: 7   ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD--------AGGTALAQ 58
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
           ++         DV +   V   +  AV+ +G ID+ +NNAG      PL     +E E++
Sbjct: 59  VL---------DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERM 108
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  N+ G +      + +M  Q + G I N+   G+  S  P  AVY +TK  +R +   
Sbjct: 109 IDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGA-LSVVPTAAVYCATKFAVRAISDG 166
Query: 216 LFKESKRSKVGVHTASPGMVLTDL---LLSGSTIQNKQMFNIICELPETVARTL 266
           L +ES  + + V   +PG+V ++L   +    T+     +  I   P  +AR +
Sbjct: 167 LRQES--TNIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAV 218

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 34  RNVVITGSTRGLGKALAREFLLS--GDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGS 91
           + V+ITG++ G+GKA A E+L +  GD               + +LEE LK+ +      
Sbjct: 34  KTVLITGASAGIGKATALEYLEASNGDMKLILAARR------LEKLEE-LKKTI------ 80
Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
             +   +AKV     D+ +   ++        EF  IDI +NNAG   G   + Q   E+
Sbjct: 81  -DQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED 139
Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
           I+ +  TN+   I  T+  + + + +   G I N+ G+ +G  + P  ++Y ++K  +  
Sbjct: 140 IQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNL-GSIAGRDAYPTGSIYCASKFAVGA 197
Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLL 241
              SL KE   +K+ V   +PG+V T+  L
Sbjct: 198 FTDSLRKELINTKIRVILIAPGLVETEFSL 227

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 22/202 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  +ITGS RG+G+A A  ++  G               T  E                 
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAE----------------- 48
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              +      IA DV + A + +     ++ +GSIDI +NNA       P+++ T E  +
Sbjct: 49  ---IGPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYD 104
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G++   +   R M    +GG I NM  + +G     L  VY +TK  +  L 
Sbjct: 105 RLFAINVSGTLFMMQAVARAMIAGGRGGKIINM-ASQAGRRGEALVGVYCATKAAVISLT 163
Query: 214 ASLFKESKRSKVGVHTASPGMV 235
            S      R  + V+  +PG+V
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVV 185

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G+A+A      G              +  T   EN        G  +  + 
Sbjct: 9   LVTGASRGIGRAIAETLAARG------------AKVIGTATSEN--------GAQAISDY 48
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           + A   G+  +V +PA ++ +      EFG +DI +NNAG  +    L++  +EE   I+
Sbjct: 49  LGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDII 107
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGLRQL 212
            TNL      ++  MR M  + + G I  +       G+GG +      + + K GL   
Sbjct: 108 ETNLSSVFRLSKAVMRAMM-KKRHGRIITIGSVVGTMGNGGQAN-----FAAAKAGLIGF 161
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
             SL +E     + V+  +PG + TD+  +   + + Q   I+ ++P
Sbjct: 162 SKSLAREVASRGITVNVVAPGFIETDMTRA---LSDDQRAGILAQVP 205

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITG + GLG+A+A  F                    V     N +E +      +KK 
Sbjct: 18  VVITGGSTGLGRAMAVRF-------------GQEEAKVVINYYNNEEEAL-----DAKKE 59
Query: 96  LVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +  A    I    DV +  DV  L   A+ EFG++D+ INNAG      P  + + +   
Sbjct: 60  VEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV-PSHELSLDNWN 118
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ + 
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMT 177
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L  E     + V+   PG + T +
Sbjct: 178 ETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITG + GLG+A+A  F                    V     N +E +      +KK 
Sbjct: 18  VVITGGSTGLGRAMAVRF-------------GQEEAKVVINYYNNEEEAL-----DAKKE 59
Query: 96  LVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +  A    I    DV +  DV  L   A+ EFG++D+ INNAG      P  + + +   
Sbjct: 60  VEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV-PSHELSLDNWN 118
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ + 
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMT 177
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L  E     + V+   PG + T +
Sbjct: 178 ETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 19/204 (9%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG++RG+GKA+A     +G                V++  E      +  GG     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG----- 58
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      DV + ADV+ +   A++ +G+ID+ +NNAG  +    L++    + +++
Sbjct: 59  -----------DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD-TLLIRMKKSQWDEV 106
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G  LCT+ A ++M  + K G I N+     G       A Y + K G+     +
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKKRK-GRIINIASV-VGLIGNIGQANYAAAKAGVIGFSKT 164
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
             +E     + V+   PG + +D+
Sbjct: 165 AAREGASRNINVNVVCPGFIASDM 188

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 22/206 (10%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITG + GLG+A+A  F                    V     N +E +      +KK 
Sbjct: 18  VVITGGSTGLGRAMAVRF-------------GQEEAKVVINYYNNEEEAL-----DAKKE 59
Query: 96  LVHAKVAGIAC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +  A    I    DV +  DV  L   A+ EFG++D+ INNAG      P  + + +   
Sbjct: 60  VEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPV-PSHELSLDNWN 118
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ TNL G+ L +REA++   +    G++ NM          PL   Y ++K G++ + 
Sbjct: 119 KVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSSVHE-MIPWPLFVHYAASKGGMKLMT 177
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L  E     + V+   PG + T +
Sbjct: 178 ETLALEYAPKGIRVNNIGPGAMNTPI 203

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 19/222 (8%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           ++ ++TG++RG+G+++A +    G                  E  E + E + A G  S 
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGS-------KEKAEAVVEEIKAKGVDS- 62
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     I  +V +  +V+ +    V++FGS+D+ +NNAG  +    L++   +E +
Sbjct: 63  --------FAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRD-NLLMRMKEQEWD 113
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++ TNL G   C ++A   M  Q + G I N+     G    P  A Y +TK G+  L 
Sbjct: 114 DVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSV-VGAVGNPGQANYVATKAGVIGLT 171
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 255
            S  +E     + V+  +PG +++D+  + S    +QM   I
Sbjct: 172 KSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQI 213

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  VITGST G+G A+AR    +G               TVT+           AG SS 
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTD---------EVAGLSSG 76
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
             L H        D  +P+++        + FG  DI +NNAG  +  + +  F  E+ +
Sbjct: 77  TVLHHP------ADXTKPSEIADXXAXVADRFGGADILVNNAGV-QFVEKIEDFPVEQWD 129
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +I++ NL  S    R A+   +   KG G I N+  A  G  ++P  + Y + K G+  L
Sbjct: 130 RIIAVNLSSSFHTIRGAIPPXKK--KGWGRIINIASA-HGLVASPFKSAYVAAKHGIXGL 186
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             ++  E   S V V++  PG VLT L+
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPLV 214

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+T G G+ + R F+  G                + EL++ L + +  A       
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQER----LQELKDELGDNLYIA------- 51
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      DV   A ++++      E+ +IDI +NNAG   G +P  + + E+ E +
Sbjct: 52  ---------QLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM 102
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--VYGSTKCGLRQLQ 213
           + TN  G +  TR  +  M ++   GHI N+   GS   S P     VYG+TK  +RQ  
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVER-NHGHIINI---GSTAGSWPYAGGNVYGATKAFVRQFS 158
Query: 214 ASLFKESKRSKVGVHTASPGMV----LTDLLLSGSTIQNKQMF-NIICELPETVARTL 266
            +L  +   + V V    PG+V     +++   G   + ++ + N +   PE V+  +
Sbjct: 159 LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAV 216

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 26/211 (12%)
Query: 32  GPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGS 91
           G R  ++TGS+RGLG+A+A    ++G               TV E               
Sbjct: 25  GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF-------------- 70
Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFA-VNEFG-SIDIWINNAGTNKGFKPLLQFTN 149
             +N+ H   A +A DV   +++  +  FA ++E G  +DI +NNAG  +  KP+++   
Sbjct: 71  --RNVGHDAEA-VAFDVTSESEI--IEAFARLDEQGIDVDILVNNAGI-QFRKPMIELET 124
Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            + ++++ TNL  + +  REA + M   P+G G I N+ G+ +   +    A Y   K G
Sbjct: 125 ADWQRVIDTNLTSAFMIGREAAKRM--IPRGYGKIVNI-GSLTSELARATVAPYTVAKGG 181
Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           ++ L  ++  E  +  +  +   PG +LTD+
Sbjct: 182 IKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 19/208 (9%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+GK +A  +  +G              +   E+          AG    
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI----------AG---- 78
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              V  K   I CDV +P  V+ + +    E G IDI + NAG     + +L    EE +
Sbjct: 79  ---VGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQ 134
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP-LTAVYGSTKCGLRQL 212
           +I  TN+ G  L  + A R M DQ  GG I           + P   + Y ++K  +  L
Sbjct: 135 RIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHL 194
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             ++  E    ++ V++ SPG + T+L+
Sbjct: 195 TKAMAVELAPHQIRVNSVSPGYIRTELV 222

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 165
            DV + ++V+ L    +  +G +D+ +NNAG  +    LL+   ++ + ++  NL G  L
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 166 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV 225
           C+R A ++M  Q + G I N+     G    P  A Y + K G+  L  ++ KE     +
Sbjct: 144 CSRAAAKIMLKQ-RSGRIINIASV-VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 226 GVHTASPGMVLTDLLLSGSTIQNKQMFNII 255
            V+  +PG + TD+    S +  +++  +I
Sbjct: 202 TVNAVAPGFIATDMT---SELAAEKLLEVI 228

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKV 112
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTKT 171
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKV 112
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTET 171
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSS-HEMSLSDWNKV 112
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTET 171
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G+A +V  P  ++ +     +EFG +DI +NNAG  +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIM 114
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 41/223 (18%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G+A+A      G              +  T   EN        G  +  + 
Sbjct: 9   LVTGASRGIGRAIAETLAARG------------AKVIGTATSEN--------GAQAISDY 48
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           + A   G+  +V +PA ++ +      EFG +DI +NNAG  +    L++  +EE   I+
Sbjct: 49  LGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD-NLLMRMKDEEWNDII 107
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      ++  MR M  + + G I  + G           A Y + K GL     SL
Sbjct: 108 ETNLSSVFRLSKAVMRAMM-KKRHGRIITIGG----------QANYAAAKAGLIGFSKSL 156
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     + V+  +PG + T          + Q   I+ ++P
Sbjct: 157 AREVASRGITVNVVAPGFIET---------SDDQRAGILAQVP 190

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G+A +V  P  ++ +     +EFG +DI +NNAG  +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIM 114
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGAIETDMT---KALNDEQRTATLAQVP 212

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           VVITGS+ GLGK++A  F                   +V  LEE  K G           
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSV--LEEIKKVG----------- 56
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  ++
Sbjct: 57  ---GEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSS-HEMSLSDWNKV 112
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ +  +
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE-KIPWPLFVHYAASKGGMKLMTET 171
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E     + V+   PG + T +
Sbjct: 172 LALEYAPKGIRVNNIGPGAINTPI 195

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TGS  G+G+A A      G                  E  E + + ++A GG++    
Sbjct: 13  IVTGSGGGIGQAYAEALAREGAAVVVADIN--------AEAAEAVAKQIVADGGTAIS-- 62
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQ 154
                  +A DV +P   + +++  + EFG ID  +NNA    G K   LL    E  ++
Sbjct: 63  -------VAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKK 115
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            +S NL G++ CTR   + M  +  GG I N     S  ++   +  YG  K G+  L  
Sbjct: 116 FMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQ----SSTAAWLYSNYYGLAKVGINGLTQ 170
Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELP 259
            L +E     + ++  +PG + T+   +  T   K+M  +I+  LP
Sbjct: 171 QLSRELGGRNIRINAIAPGPIDTE---ANRTTTPKEMVDDIVKGLP 213

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+  G+G+A+A++F L+               + V  LE+ L + +    G  K+ 
Sbjct: 10  VIVTGAGSGIGRAIAKKFALN-----------DSIVVAVELLEDRLNQIVQELRGMGKE- 57
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                V G+  DV +  DV++        +  ID+  NNAG   G  P+ + ++E  E++
Sbjct: 58  -----VLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV 112
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ NL  +   +R  + +M  Q KG  +     AG  G      A Y   K GL  L  S
Sbjct: 113 LAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFA--GAPYTVAKHGLIGLTRS 170
Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGS 244
           +        +      PG V T++ L  S
Sbjct: 171 IAAHYGDQGIRAVAVLPGTVKTNIGLGSS 199

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 165
            DV    D Q++  +A  EFGS+D  +NNAG + G   L   + E   ++V  NL G  +
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF-LETESVERFRKVVEINLTGVFI 116
Query: 166 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV 225
             +  +  M+D   GG I N+  A +G     LT+ YG++K G+R L      E    ++
Sbjct: 117 GMKTVIPAMKDA-GGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 226 GVHTASPGMVLTDL 239
            V++  PGM  T +
Sbjct: 175 RVNSVHPGMTYTPM 188

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 165
            DV    D Q++  +A  EFGS+D  +NNAG + G   L   + E   ++V  NL G  +
Sbjct: 58  LDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMF-LETESVERFRKVVEINLTGVFI 116
Query: 166 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV 225
             +  +  M+D   GG I N+  A +G     LT+ YG++K G+R L      E    ++
Sbjct: 117 GMKTVIPAMKDA-GGGSIVNISSA-AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRI 174
Query: 226 GVHTASPGMVLTDL 239
            V++  PGM  T +
Sbjct: 175 RVNSVHPGMTYTPM 188

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQIVSTNLVGSI 164
            DV + A +Q + + A+ EFG IDI ++N G +N+G   ++  T+++   I+ TNL+G+ 
Sbjct: 114 ADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG--EVVSLTDQQWSDILQTNLIGAW 171
Query: 165 LCTREAMRVMRDQPKGGH-IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 223
              R  +  M ++ +GG  IF     G  G+  P  + Y ++K G++ L  SL  E  R 
Sbjct: 172 HACRAVLPSMIERGQGGSVIFVSSTVGLRGA--PGQSHYAASKHGVQGLMLSLANEVGRH 229
Query: 224 KVGVHTASPGMVLTDLLLS 242
            + V++ +PG V T++ L+
Sbjct: 230 NIRVNSVNPGAVNTEMALN 248

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 26/223 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G+A +V  P  ++ +     +EFG +DI +NNAG  +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLMRMKEEEWSDIM 114
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      ++  +R M  + + G I N+ G+  G       A + + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANFAAAKAGVIGFTKSM 172
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TGSTRG+G+A+A +   +G                  E+                 N 
Sbjct: 11  LVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEI----------------ANK 54
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K  G+  ++     + K      N    IDI +NNAG  +  K  L+ +  + E+++
Sbjct: 55  YGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD-KLFLRMSLLDWEEVL 113
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQAS 215
             NL G+ L T+ ++R M  Q + G I N+    G  G+   +   Y +TK GL     S
Sbjct: 114 KVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVGFTGNVGQVN--YSTTKAGLIGFTKS 170
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L KE     V V+  +PG + TD+
Sbjct: 171 LAKELAPRNVLVNAVAPGFIETDM 194

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G+A +V  P  ++ +     +EFG +DI +NNA   +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRD-NLLMRMKEEEWSDIM 114
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R V+ITG   GLG+A A      G              +++ ++     EG+ A+  +  
Sbjct: 14  RVVLITGGGSGLGRATAVRLAAEG------------AKLSLVDVS---SEGLEASKAAVL 58
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +    A+V     DV + A V+         FG ID + NNAG      P   FT  E +
Sbjct: 59  ETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD 118
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++VS NL G  L   + +++MR+Q   G + N    G G       + Y + K G+  L 
Sbjct: 119 KVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVG-GIRGIGNQSGYAAAKHGVVGLT 176
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +   E  R  + ++  +PG + T ++
Sbjct: 177 RNSAVEYGRYGIRINAIAPGAIWTPMV 203

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 33/207 (15%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+A+     G              + VT       +G+        
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHK------------VAVTHRGSGAPKGLF------- 56
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                    G+ CDV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 57  ---------GVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 105
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           E++++ NL G+    + A R M+    G  IF    +GS G      A Y ++K G+  +
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGSWGIGN--QANYAASKAGVIGM 163
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             S+ +E  ++ V  +  +PG + TD+
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDM 190

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 26/223 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 16  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 61
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G+A +V  P  ++ +     +EFG +DI +NNA   +    L++   EE   I+
Sbjct: 62  ------GMALNVTNPESIEAVLKAITDEFGGVDILVNNADITRD-NLLMRMKEEEWSDIM 114
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      ++  +R M  + + G I N+ G+  G       A Y + K G+     S+
Sbjct: 115 ETNLTSIFRLSKAVLRGMM-KKRQGRIINV-GSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     V V+T +PG + TD+      + ++Q    + ++P
Sbjct: 173 AREVASRGVTVNTVAPGFIETDMT---KALNDEQRTATLAQVP 212

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+VV+TG T+G+G+ +A  F  +G                V +L++              
Sbjct: 11  RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-------------- 56
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
             L   KV G+  DV + A    L+  AV EFG ID+   NAG      PL   T E++ 
Sbjct: 57  --LGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD-APLATMTPEQLN 113
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTKCG 208
            I + N+ G+    +  +  +     G  +      G      P+T       YG+TK  
Sbjct: 114 GIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITG------PITGYPGWSHYGATKAA 167
Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 241
                 +   E    K+ V+   PG ++T+ LL
Sbjct: 168 QLGFMRTAAIELAPHKITVNAIMPGNIMTEGLL 200

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTV-TELEENLKEGMMAAGGSSKKN 95
           ++TG++RG+G+A+A E    G              M + T   E   EG+   G + K+ 
Sbjct: 32  IVTGASRGIGRAIALELARRG-------------AMVIGTATTEAGAEGI---GAAFKQA 75
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
            +  +  G   +V +   V  L    + EFG++++ +NNAG  +  +  ++  ++E + +
Sbjct: 76  GLEGR--GAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQD-QLAMRMKDDEWDAV 132
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL      +R  +R M  + +GG I N+     G +  P    Y + K G+  +  +
Sbjct: 133 IDTNLKAVFRLSRAVLRPMM-KARGGRIVNITSV-VGSAGNPGQVNYAAAKAGVAGMTRA 190
Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L +E     + V+  +PG + TD+
Sbjct: 191 LAREIGSRGITVNCVAPGFIDTDM 214

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 100 KVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 158
           KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+   I+S 
Sbjct: 59  KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSI 117
Query: 159 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 218
           N   +   +  A   ++   +G  +F    + SG  + P  AVYG+TK  + QL   L  
Sbjct: 118 NFEAAYHLSVLAHPFLKASERGNVVF--ISSVSGALAVPYEAVYGATKGAMDQLTRCLAF 175
Query: 219 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 250
           E  +  + V+   PG++ T L+    TIQ+ +
Sbjct: 176 EWAKDNIRVNGVGPGVIATSLV--EMTIQDPE 205

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 23/205 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEE--NLKEGMMAAGGSSKK 94
           V+TG++RG+G A+AR+    G              +T  ++E+   ++  ++AAGG ++ 
Sbjct: 33  VVTGASRGIGAAIARKLGSLG----------ARVVLTARDVEKLRAVEREIVAAGGEAES 82
Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
           +         ACD+     +   +   +   G  D+ +NNAG      PL      E + 
Sbjct: 83  H---------ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDA 133
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           +++ NL    L  R     M    K GHI N+    +G +     A Y ++K GL  L  
Sbjct: 134 LIAVNLKAPYLLLRAFAPAMI-AAKRGHIINISSL-AGKNPVADGAAYTASKWGLNGLMT 191
Query: 215 SLFKESKRSKVGVHTASPGMVLTDL 239
           S  +E ++ +V V   +PG V T+ 
Sbjct: 192 SAAEELRQHQVRVSLVAPGSVRTEF 216

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 100 KVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 158
           KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+   I+S 
Sbjct: 58  KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSI 116
Query: 159 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 218
           N   +   +  A   ++   +G  +F    + SG  + P  AVYG+TK  + QL   L  
Sbjct: 117 NFEAAYHLSVLAHPFLKASERGNVVF--ISSVSGALAVPYEAVYGATKGAMDQLTRCLAF 174
Query: 219 ESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 250
           E  +  + V+   PG++ T L+    TIQ+ +
Sbjct: 175 EWAKDNIRVNGVGPGVIATSLV--EMTIQDPE 204

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/303 (22%), Positives = 114/303 (37%), Gaps = 34/303 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG   G+GKA+ +E L  G                  EL+ NL               
Sbjct: 22  IVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK----------- 70
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
             A+V  I C++    +V  L    ++ FG I+  +NN G  +   P    +++    ++
Sbjct: 71  -QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGG-GQFLSPAEHISSKGWHAVL 128
Query: 157 STNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            TNL G+  +C       M++   GG I N+      G   PL    G+ + G+  L  S
Sbjct: 129 ETNLTGTFYMCKAVYSSWMKEH--GGSIVNIIVPTKAG--FPLAVHSGAARAGVYNLTKS 184
Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG 275
           L  E   S + ++  +PG++ +   +       +  F        +  +    RI V + 
Sbjct: 185 LALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE------GSFQKIPAKRIGVPEE 238
Query: 276 SGKAINYLTPPRILLALVTAWLRRGRWFD-DQGRALY--AAEADRIRNWAENRARFSFTD 332
               + +L  P        A    G+  D D GR+LY  + E     NW +     S   
Sbjct: 239 VSSVVCFLLSP-------AASFITGQSVDVDGGRSLYTHSYEVPDHDNWPKGAGDLSVVK 291
Query: 333 AME 335
            M+
Sbjct: 292 KMK 294

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 163
           I  D+ +  ++ KL + AV  FG +DI ++N+G    F  L   T EE +++ S N  G 
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQ 131
Query: 164 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 223
               REA R + +   GG I       S   S P  ++Y  +K  +        K+    
Sbjct: 132 FFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDK 188
Query: 224 KVGVHTASPGMVLTDLL 240
           K+ V+  +PG  +TD+ 
Sbjct: 189 KITVNAVAPGGTVTDMF 205

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 19/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++T ST G+G A+AR     G               TV  L+    EG+           
Sbjct: 18  LVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ---GEGL----------- 63
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
               V G  C V +  D ++L   AVN  G +DI ++NA  N  F  ++  T E  ++I+
Sbjct: 64  ---SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+  ++L T+  +  M ++  GG +  +   G+     P    Y  +K  L  L  +L
Sbjct: 121 HVNVKATVLMTKAVVPEM-EKRGGGSVLIVSSVGA-YHPFPNLGPYNVSKTALLGLTKNL 178
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             E     + V+  +PG++ T+ 
Sbjct: 179 AVELAPRNIRVNCLAPGLIKTNF 201

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 18/210 (8%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG +RG+G A+ R     G                  E  + +   +  +GG     
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQG-------WRVGVNYAANREAADAVVAAITESGG----- 76
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   I  DV   AD+    +    +FG +D  +NNAG     + + + + E IE+ 
Sbjct: 77  ----EAVAIPGDVGNAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERX 132
Query: 156 VSTNLVGSILCTREAMRVMRD--QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +  N+ GSILC  EA+R        +GG I N+    +   S      Y ++K  +    
Sbjct: 133 LRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFT 192
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
             L +E     + V+   PG++ TDL  SG
Sbjct: 193 IGLAREVAAEGIRVNAVRPGIIETDLHASG 222

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           ++ ++TG++RG+G+++A +    G                  E  E + E + A G  S 
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEG-------YNVAVNYAGSKEKAEAVVEEIKAKGVDS- 56
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     I  +V +  +V+      V++FGS+D+ +NNAG  +    L +   +E +
Sbjct: 57  --------FAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRD-NLLXRXKEQEWD 107
Query: 154 QIVSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            ++ TNL G   C ++A  + +R   + G I N+     G    P  A Y +TK G+  L
Sbjct: 108 DVIDTNLKGVFNCIQKATPQXLR--QRSGAIINLSSV-VGAVGNPGQANYVATKAGVIGL 164
Query: 213 QASLFKESKRSKVGVHTASPGMVLTD 238
             S  +E     + V+  +PG +++D
Sbjct: 165 TKSAARELASRGITVNAVAPGFIVSD 190

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+ +IT  T+GLGK +  + L  G               T+ E  ++++E          
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEE---------- 57
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEI 152
                 ++  +  DV +  D+ K+   A++ FG ID  INNAG      K L+ +  +E 
Sbjct: 58  ------RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEW 111
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP---LTAVYGSTKCGL 209
            +++  NL       +  + VMR Q   G I N      G  S P     + + + K GL
Sbjct: 112 NEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINY--GFQGADSAPGWIYRSAFAAAKVGL 168
Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN 248
             L  ++  E     +  +   PG ++ +  +  +TIQ 
Sbjct: 169 VSLTKTVAYEEAEYGITANMVCPGDIIGE--MKEATIQE 205

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 40/231 (17%)
Query: 12  GIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXX 71
           G+ +GT    N+  +   +   + VVITG+++G+G  L R +                  
Sbjct: 10  GVDLGT---ENLYFQSXXRNQQKVVVITGASQGIGAGLVRAYR----------------- 49
Query: 72  MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW 131
                 + N +   + A   S K      +  +A D+ +P    ++    +  FG ID  
Sbjct: 50  ------DRNYR---VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100
Query: 132 INNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM----- 186
           +NNAG     KP ++ T E+ +  +  N+ G    T+ A      Q   GHI ++     
Sbjct: 101 VNNAGVFLA-KPFVEXTQEDYDHNLGVNVAGFFHITQRAAAEXLKQ-GSGHIVSITTSLV 158
Query: 187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 237
           D    G  S    A+   TK GL  +  SL  E  RS V V+  SPG++ T
Sbjct: 159 DQPXVGXPS----ALASLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKT 205

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 163
           I  D+ +  ++ KL + AV  FG +DI ++N+G    F  L   T EE +++ S N  G 
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGV-VSFGHLKDVTEEEFDRVFSLNTRGQ 131
Query: 164 ILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS 223
               REA R + +   GG I       S   S P  +++  +K  +        K+    
Sbjct: 132 FFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDK 188
Query: 224 KVGVHTASPGMVLTDLL 240
           K+ V+  +PG  +TD+ 
Sbjct: 189 KITVNAVAPGGTVTDMF 205

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 21/207 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           + V++TG T+G+G A+  EF   G               T    E  L E +      SK
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFG-----------AVIHTCARNEYELNECL------SK 57
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                 +V G  CD     + +KL     + F G +DI INN G  +  KP L +T E+ 
Sbjct: 58  WQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDF 116
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
              +STNL  +   ++ A  +++    G  IF    AG    S  + ++Y +TK  L QL
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV--VSASVGSIYSATKGALNQL 174
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L  E     +  +  +P ++ T L
Sbjct: 175 ARNLACEWASDGIRANAVAPAVIATPL 201

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  V+TG   G+G A A EF   G              + ++++++   E   A  G   
Sbjct: 32  RAAVVTGGASGIGLATATEFARRG------------ARLVLSDVDQPALE--QAVNGLRG 77
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +        G+ CDV    ++ +L++ A    G +D+  +NAG      PL Q  +++  
Sbjct: 78  QGF---DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWR 133
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHI-FNMDGAG---SGGSSTPLTAVYGSTKCGL 209
            ++  +L GSI      +  + +Q  GGHI F    AG   + G  T     YG  K G+
Sbjct: 134 WVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGT-----YGVAKYGV 188
Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
             L  +L +E K + +GV    P +V T L+ +   I+
Sbjct: 189 VGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR 226

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           VITG+T G+G A A+ F+  G              + +T   +++ +  +A         
Sbjct: 33  VITGATSGIGLAAAKRFVAEG------------ARVFITGRRKDVLDAAIAE-------- 72
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           +     GI  D    A++ +L      E G ID+   NAG      PL + T E+ +   
Sbjct: 73  IGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSXL-PLGEVTEEQYDDTF 131
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+ G +   ++A+ ++    +G  +  + G+ +G + TP  +VY ++K  LR    + 
Sbjct: 132 DRNVKGVLFTVQKALPLL---ARGSSVV-LTGSTAGSTGTPAFSVYAASKAALRSFARNW 187
Query: 217 FKESKRSKVGVHTASPGMVLTDLL--LSGST-IQNKQMFNIIC 256
             + K   + ++T SPG   T  L  L+G   +Q + + N + 
Sbjct: 188 ILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA 230

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 19/204 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TGS+RG+GKA A     +G              +   E  E L               
Sbjct: 8   LVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--------------- 52
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              KV  +  +V +PA ++++       FG +D+++NNA +    +P+++      +  +
Sbjct: 53  -GVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTM 110
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + N    + C +EA ++M ++  GGHI ++   GS       T V G +K  L  L   L
Sbjct: 111 NINAKALLFCAQEAAKLM-EKNGGGHIVSISSLGSIRYLENYTTV-GVSKAALEALTRYL 168
Query: 217 FKESKRSKVGVHTASPGMVLTDLL 240
             E    ++ V+  S G + TD L
Sbjct: 169 AVELSPKQIIVNAVSGGAIDTDAL 192

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 26/223 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+GKA+A      G                   L +N K              
Sbjct: 13  LVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGK-------------- 58
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G A +V  P  ++ +     +EFG +DI +NNAG  +    L +   EE   I 
Sbjct: 59  ------GXALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD-NLLXRXKEEEWSDIX 111
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL  SI    +A+     + + G I N+ G+  G       A Y + K G+     S 
Sbjct: 112 ETNLT-SIFRLSKAVLRGXXKKRQGRIINV-GSVVGTXGNAGQANYAAAKAGVIGFTKSX 169
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            +E     V V+T +PG + TD       + ++Q    + ++P
Sbjct: 170 AREVASRGVTVNTVAPGFIETDXT---KALNDEQRTATLAQVP 209

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 19/203 (9%)
Query: 38  ITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNLV 97
           +TGS+ G+G A+A  +  +G                  E  E+L+          K   V
Sbjct: 39  VTGSSGGIGWAVAEAYAQAG-----ADVAIWYNSHPADEKAEHLQ----------KTYGV 83
Query: 98  HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIV 156
           H+K     C++ +P  V++  +    +FG+ID+++ NAG      P +   N +   +I+
Sbjct: 84  HSKA--YKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKII 141
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           S +L G   C+    ++ +   KG  I     +G   +   L A Y + K     L  SL
Sbjct: 142 SVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSL 201
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             E       V+T SPG + TD+
Sbjct: 202 AIEWAPF-ARVNTISPGYIDTDI 223

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 90/207 (43%), Gaps = 33/207 (15%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+A+     G              + VT       +G+        
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGH------------KVAVTHRGSGAPKGLF------- 56
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                    G+  DV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 57  ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 105
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           E++++ NL G+    + A R M+    G  IF   G+ SG       A Y ++K G+  +
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFI--GSVSGLWGIGNQANYAASKAGVIGM 163
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             S+ +E  ++ V  +  +PG + TD+
Sbjct: 164 ARSIARELSKANVTANVVAPGYIDTDM 190

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 22/202 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           ++ +ITGS RG+G+A A  ++  G               TV   + +++    AA     
Sbjct: 9   KSALITGSARGIGRAFAEAYVREG--------------ATVAIADIDIERARQAAA---- 50
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              +      +  DV     +       V   G +DI +NNA       P+++ T E  E
Sbjct: 51  --EIGPAAYAVQXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYE 107
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G++   + A R    Q +GG I N   + +G     L A+Y +TK  +  L 
Sbjct: 108 KLFAINVAGTLFTLQAAARQXIAQGRGGKIINX-ASQAGRRGEALVAIYCATKAAVISLT 166
Query: 214 ASLFKESKRSKVGVHTASPGMV 235
            S   +  + ++ V+  +PG+V
Sbjct: 167 QSAGLDLIKHRINVNAIAPGVV 188

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 33/207 (15%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+A+     G              + VT       +G+        
Sbjct: 36  RSVLVTGGNRGIGLAIAQRLAADGH------------KVAVTHRGSGAPKGLF------- 76
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                    G+  DV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 77  ---------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 125
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           E++++ NL G+    + A R M+    G  IF    +G  G      A Y ++K G+  +
Sbjct: 126 EKVINANLTGAFRVAQRASRSMQRNKFGRMIFIASVSGLWGIGN--QANYAASKAGVIGM 183
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             S+ +E  ++ V  +  +PG + TD+
Sbjct: 184 ARSIARELSKANVTANVVAPGYIDTDM 210

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Query: 101 VAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 159
           V G  CD+    +  KL     + F G ++I +NNAG     K    FT ++   I+ TN
Sbjct: 72  VEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTN 130
Query: 160 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 219
              +   ++ A  +++    G  IF    AG   S+ P  ++Y ++K  + Q+  SL  E
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSSIAGF--SALPSVSLYSASKGAINQMTKSLACE 188
Query: 220 SKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFNIICELP 259
             +  + V++ +PG++LT L+   +  +  Q +++ N I + P
Sbjct: 189 WAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP 231

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 87/220 (39%), Gaps = 34/220 (15%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R   +TG   G+G  L R+ L  G                +  LE         A GS  
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLE---------AEGSGP 59
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +      V G+  DV      +  ++     FG + I  NNAG N  F+P+ + + ++ +
Sbjct: 60  E------VMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWD 112
Query: 154 QIVSTNLVGSI-----LCTREAMRVMRDQPKGGHIFNMD------GAGSGGSSTPLTAVY 202
            ++  NL G +        R   RV   + KGGH+ N         AGS G       +Y
Sbjct: 113 WLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG-------IY 165
Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +TK  +R L  SL     + ++GV    PG+V + +  S
Sbjct: 166 NTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYAS 205

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+GKA+A      G              + V+++     +   A+ G   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADG------------ATVIVSDINAEGAKAAAASIGK-- 52
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   IA D+ +P  V+ L        G IDI +NNA       P + + + +++
Sbjct: 53  ------KARAIAADISDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLD 102
Query: 154 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
              +I+  NL G+ + TR     MR   K G + ++  + +  + TP  A Y + K G+ 
Sbjct: 103 HWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI-ASNTFFAGTPNMAAYVAAKGGVI 161
Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
               +L  E  +  +  +  +PG++ +D
Sbjct: 162 GFTRALATELGKYNITANAVTPGLIESD 189

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSIL 165
            D+ + A ++ L   A  EFG +DI +NNAG      P+ QF  E  ++I++ NL     
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFH 116
Query: 166 CTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSK 224
            TR A+  MR +   G I N+    G  GS+    A Y + K G+  L   +  E+  S 
Sbjct: 117 GTRLALPGMRAR-NWGRIINIASVHGLVGSTG--KAAYVAAKHGVVGLTKVVGLETATSN 173
Query: 225 VGVHTASPGMVLTDLL 240
           V  +   PG VLT L+
Sbjct: 174 VTCNAICPGWVLTPLV 189

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 83/210 (39%), Gaps = 18/210 (8%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG +RG+G A A   LL+                   E+   ++E    AGG     
Sbjct: 28  VLITGGSRGIGAASA---LLAARQGYAVAVNYASNSAAADEVVRQIRE----AGG----- 75
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV +  +V         + G +   +NNAG       +   T E +++ 
Sbjct: 76  ----QALAVQADVAKEREVLAXFETVDAQLGRLSALVNNAGVVDQTTRVDGITLERLQRX 131
Query: 156 VSTNLVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
              N+ GS LC REA++    R    GG I N+  A +   S      Y + K  +    
Sbjct: 132 FEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFT 191
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
             L KE     + V+   PG++ TD+  SG
Sbjct: 192 LGLAKEVATEGIRVNAVRPGIIETDIHASG 221

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 159
           +V  + CDV     V  L    V + G +D+ +NNAG   G  P++  T+EE +++++  
Sbjct: 74  RVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG-GQTPVVDMTDEEWDRVLNVT 132
Query: 160 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 219
           L   +  TR A+R  R    GG I N + +  G  +    + Y + K G+  L      E
Sbjct: 133 LTSVMRATRAALRYFRGVDHGGVIVN-NASVLGWRAQHSQSHYAAAKAGVMALTRCSAIE 191
Query: 220 SKRSKVGVHTASPGM 234
           +    V ++  SP +
Sbjct: 192 AVEFGVRINAVSPSI 206

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 80/204 (39%), Gaps = 28/204 (13%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG++RG+G+A AR     G                  ELE  L              
Sbjct: 8   VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALP------------- 54
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  DV E  D  +        FG +   +NNAG     KP+ + T EE   +
Sbjct: 55  --------LPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLV 105
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQ 213
           + TNL G+ L  R A+  +  +  GG I N+   GS     P    A Y ++K GL  L 
Sbjct: 106 LDTNLTGAFLGIRHAVPALLRR-GGGTIVNV---GSLAGKNPFKGGAAYNASKFGLLGLA 161
Query: 214 ASLFKESKRSKVGVHTASPGMVLT 237
            +   + + + V V    PG V T
Sbjct: 162 GAAMLDLREANVRVVNVLPGSVDT 185

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 28/227 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+T GLG+A+AR     G                    EE LKE  +AA     
Sbjct: 11  RKALVTGATGGLGEAIARALHAQGAIVGLHGTR-----------EEKLKE--LAA----- 52
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
              +  ++     ++ +   V+ L   A  E G +DI +NNAG T  G    ++ ++E+ 
Sbjct: 53  --ELGERIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGL--FVRMSDEDW 108
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + +++ NL      TRE    M  + + G I N+     G +  P  A Y ++K GL   
Sbjct: 109 DAVLTVNLTSVFNLTRELTHPMMRR-RNGRIINITSI-VGVTGNPGQANYCASKAGLIGF 166
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
             SL +E     V V+  +PG + + +      +  KQ   I+  +P
Sbjct: 167 SKSLAQEIASRNVTVNCIAPGFIESAMT---GKLNEKQKDAIMGNIP 210

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 95/227 (41%), Gaps = 28/227 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+T GLG+A+AR     G                    EE LKE     G    
Sbjct: 8   RKALVTGATGGLGEAIARALHAQGAIVGLHGTR-----------EEKLKELAAELG---- 52
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                 ++     ++ +   V+ L   A  E G +DI +NNAG T  G    ++ ++E+ 
Sbjct: 53  -----ERIFVFPANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGL--FVRMSDEDW 105
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + +++ NL      TRE    M  + + G I N+     G +  P  A Y ++K GL   
Sbjct: 106 DAVLTVNLTSVFNLTRELTHPMM-RRRNGRIINITSI-VGVTGNPGQANYCASKAGLIGF 163
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
             SL +E     V V+  +PG + + +      +  KQ   I+  +P
Sbjct: 164 SKSLAQEIASRNVTVNCIAPGFIESAMT---GKLNEKQKDAIMGNIP 207

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 82  KEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF 141
           +E +  A  S ++  V A+     CDV     V    +  V +FG ID   NNAG    F
Sbjct: 41  REALEKAEASVREKGVEAR--SYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF 98
Query: 142 KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV 201
            P+  + +++  ++++ N+ G+    +   R M  Q  G  +     AG  G   P  A 
Sbjct: 99  APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAA 156
Query: 202 YGSTKCGLRQLQASLFKESKRSKVGVHTASPG 233
           YG++K  +  L  +   +     + V+  SPG
Sbjct: 157 YGTSKGAIIALTETAALDLAPYNIRVNAISPG 188

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 26/243 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++ G+G A+AR  +  G               TV  +EE   E         K
Sbjct: 33  RLALVTGASGGIGAAVARALVQQG-------LKVVGCARTVGNIEELAAE--------CK 77
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +    CD+    D+  + +   ++   +DI INNAG  +    LL  +    +
Sbjct: 78  SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWK 136
Query: 154 QIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLR 210
            + + N++   +CTREA + M+++    GHI N++   SG    PL  T  Y +TK  + 
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSM-SGHRVLPLSVTHFYSATKYAVT 195
Query: 211 QLQASLFKESKRSKVGVHTA--SPGMVLTDLLLSGSTIQNKQMF----NIICELPETVAR 264
            L   L +E + ++  +     SPG+V T           ++       + C  PE VA 
Sbjct: 196 ALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAE 255
Query: 265 TLV 267
            ++
Sbjct: 256 AVI 258

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 37  VITGSTRGLGKALAR-------EFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAG 89
           +ITG++ G+G A+AR       + ++SG                    EE LK    + G
Sbjct: 18  LITGASSGIGSAIARLLHKLGSKVIISGSN------------------EEKLK----SLG 55
Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
            + K N           +VC  A+ ++ SN  +++  ++DI + NAG        ++  +
Sbjct: 56  NALKDNYT--------IEVCNLANKEECSNL-ISKTSNLDILVCNAGITSDTLA-IRMKD 105
Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           ++ ++++  NL  + +  REA++ M  Q + G I N+     G +  P  A Y ++K GL
Sbjct: 106 QDFDKVIDINLKANFILNREAIKKMI-QKRYGRIINISSI-VGIAGNPGQANYCASKAGL 163
Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
             +  SL  E     + V+  +PG + +D+      +  KQ   I+ ++P
Sbjct: 164 IGMTKSLSYEVATRGITVNAVAPGFIKSDMT---DKLNEKQREAIVQKIP 210

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 20/208 (9%)
Query: 33  PRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSS 92
           P+   +TG + G+G A+AR     G                V        +G+ AAG   
Sbjct: 24  PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV--------DGLRAAG--- 72
Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                   V G +CDV    +V      AV  FG I I +N+AG N G +      +   
Sbjct: 73  ------HDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE-TADLDDALW 125
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
             ++ TNL G    TRE +R    +  G G I N+   G G       A Y ++K G+  
Sbjct: 126 ADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG-GKQGVMYAAPYTASKHGVVG 184
Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
              S+  E  ++ + V+   PG V T +
Sbjct: 185 FTKSVGFELAKTGITVNAVCPGYVETPM 212

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 12/169 (7%)
Query: 105 AC--DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVG 162
           AC  DV +   +  + +  V  FG +D  + NAG       L+  T E+ +++++ NL G
Sbjct: 79  ACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRG 137
Query: 163 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 222
           + LCT+ A   M ++  GG I N+    +G  +   T  YG +K G+ QL      E + 
Sbjct: 138 AWLCTKHAAPRMIER-GGGAIVNLSSL-AGQVAVGGTGAYGMSKAGIIQLSRITAAELRS 195
Query: 223 SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
           S +  +T  P  V T +       Q   M      L    AR+++ R++
Sbjct: 196 SGIRSNTLLPAFVDTPM-------QQTAMAMFDGALGAGGARSMIARLQ 237

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++ G G A+A  FL  GD             ++   LEE  +    A      
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALD-------LSAETLEETARTHWHAYAD--- 52
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTN-EE 151
                 KV  +  DV +  DV       + +FG+ID+ +NNAG T      +L  T  E+
Sbjct: 53  ------KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQ 106
Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            +++++ N+ G  L  R  +  M  Q   G I N+    S   + P  + Y ++K  + Q
Sbjct: 107 FDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASVAS-LVAFPGRSAYTTSKGAVLQ 164
Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L  S+  +   S +  +   PGM+ T +
Sbjct: 165 LTKSVAVDYAGSGIRCNAVCPGMIETPM 192

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 10  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 50
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 51  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 109
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 110 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 168
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 169 KALGLELARTGITVNAVCPGFVETPMAAS 197

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           VITGS+ G+G A+A  F   G              + V    + L E        S K  
Sbjct: 11  VITGSSSGIGLAIAEGFAKEG-----------AHIVLVARQVDRLHEA-----ARSLKEK 54
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +V  +A DV  P  V  +     + FG  DI +NNAGT    + +++  +E+ +   
Sbjct: 55  FGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQFYW 113
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQA 214
             +++ ++   R  +  MR +  G  I N     S  +  PL    +Y  TK  L     
Sbjct: 114 ELHVMAAVRLARGLVPGMRARGGGAIIHN----ASICAVQPLWYEPIYNVTKAALMMFSK 169
Query: 215 SLFKESKRSKVGVHTASPGMVLT 237
           +L  E  +  + V+  +PG++LT
Sbjct: 170 TLATEVIKDNIRVNCINPGLILT 192

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 26  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 66
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 67  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 125
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 184
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 185 KALGLELARTGITVNAVCPGFVETPMAAS 213

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK---EGMMAAGG 90
           R V++TG+  GLG+A A  F   G              + V +L  + K   +G +AA  
Sbjct: 31  RVVLVTGAGAGLGRAYALAFAERG------------ALVVVNDLGGDFKGVGKGSLAADK 78
Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
             ++       A    D  E    +K+   A++ FG ID+ +NNAG  +  +   + ++E
Sbjct: 79  VVEEIRRRGGKAVANYDSVEEG--EKVVKTALDAFGRIDVVVNNAGILRD-RSFARISDE 135
Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
           + + I   +L GS   TR A   M+ Q  G  I  M  + SG       A Y + K GL 
Sbjct: 136 DWDIIHRVHLRGSFQVTRAAWEHMKKQKYGRII--MTSSASGIYGNFGQANYSAAKLGLL 193
Query: 211 QLQASLFKESKRSKVGVHTASP 232
            L  SL  E ++S +  +T +P
Sbjct: 194 GLANSLAIEGRKSNIHCNTIAP 215

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 89/210 (42%), Gaps = 26/210 (12%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAV-YGSTKCGLRQL 212
           +V TNL G    T++ ++      +G G I N+  A +GG    + A  Y ++K G+   
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNI--ASTGGKQGLVHAAPYSASKHGVVGF 187
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLS 242
             +L  E  R+ + V+   PG V T +  S
Sbjct: 188 TKALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLD 129
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGWVETPMAAS 217

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 19/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+ +G+GKA+A   +  G                 +E+ +        AGG      
Sbjct: 6   LVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ--------AGG------ 51
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
            HA    +  DV +   V      A    G  D+ +NNAG      P+   T E ++++ 
Sbjct: 52  -HA--VAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS-TPIESITPEIVDKVY 107
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + N+ G I   + A+   + +  GG I N   + +G    P  AVY S+K  +R L  + 
Sbjct: 108 NINVKGVIWGIQAAVEAFKKEGHGGKIINA-CSQAGHVGNPELAVYSSSKFAVRGLTQTA 166
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
            ++     + V+   PG+V T +
Sbjct: 167 ARDLAPLGITVNGYCPGIVKTPM 189

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 26  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 66
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 67  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLD 125
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 126 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 184
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 185 KALGLELARTGITVNAVCPGFVETPMAAS 213

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 24/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+T G+G  +AR     G                    EE L+        ++ K L
Sbjct: 30  LVTGATSGIGLEIARRLGKEG-----------LRVFVCARGEEGLR--------TTLKEL 70
Query: 97  VHAKVA--GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
             A V   G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    
Sbjct: 71  REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-RLGGGATAELADELWLD 129
Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +V TNL G    T++ ++      +G G I N+   G G       A Y ++K G+    
Sbjct: 130 VVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG-GKQGVVHAAPYSASKHGVVGFT 188
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +L  E  R+ + V+   PG V T +  S
Sbjct: 189 KALGLELARTGITVNAVCPGFVETPMAAS 217

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+GKA+A      G              + V+++     +   A+ G   
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADG------------ATVIVSDINAEGAKAAAASIGK-- 52
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   IA D+ +P  V+ L        G IDI +NNA       P + + + +++
Sbjct: 53  ------KARAIAADISDPGSVKALFAEIQALTGGIDILVNNA----SIVPFVAWDDVDLD 102
Query: 154 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
              +I+  NL G+ + TR      R   K G + ++  + +  + TP  A Y + K G+ 
Sbjct: 103 HWRKIIDVNLTGTFIVTRAGTDQXRAAGKAGRVISI-ASNTFFAGTPNXAAYVAAKGGVI 161
Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
               +L  E  +  +  +  +PG++ +D
Sbjct: 162 GFTRALATELGKYNITANAVTPGLIESD 189

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 43/262 (16%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+ +G+G+A A   LL G                V  ++ NL+ G+       ++  
Sbjct: 11  LVTGAAQGIGRAFAEALLLKG--------------AKVALVDWNLEAGVQCKAALHEQ-F 55
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              K   I CDV +   ++      V+ FG +DI +NNAG N           +  E+ +
Sbjct: 56  EPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTL 106
Query: 157 STNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-- 212
             NLV  I  T   +  M  Q   +GG I NM    +G        VY ++K G+     
Sbjct: 107 QINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL-AGLMPVAQQPVYCASKHGIVGFTR 165
Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 272
            A+L      S V ++   PG V T +L    +I+ ++      E  + +   +      
Sbjct: 166 SAALAANLMNSGVRLNAICPGFVNTAIL---ESIEKEENMGQYIEYKDHIKDMI------ 216
Query: 273 VKGSGKAINYLTPPRILLALVT 294
                K    L PP I   L+T
Sbjct: 217 -----KYYGILDPPLIANGLIT 233

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/223 (23%), Positives = 93/223 (41%), Gaps = 23/223 (10%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+ RG+G+ +A+    S                 V E++    E             
Sbjct: 48  LVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYES------------ 95
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                +G A DV +  ++ ++ N  + E  ++DI +NNAG  +     L+  N+E E ++
Sbjct: 96  -----SGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD-NLFLRMKNDEWEDVL 149
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
            TNL      T+   + M +  + G I N+     G +     A Y S+K G+     SL
Sbjct: 150 RTNLNSLFYITQPISKRMINN-RYGRIINISSI-VGLTGNVGQANYSSSKAGVIGFTKSL 207
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP 259
            KE     + V+  +PG + +D+      I  +   NII  +P
Sbjct: 208 AKELASRNITVNAIAPGFISSDMT---DKISEQIKKNIISNIP 247

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 27/208 (12%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVT----ELEENLKEGMMAAGGSS 92
           +ITGS+ G+G+A A  F   G              +T+T    E  E  ++ ++AAG S 
Sbjct: 10  IITGSSNGIGRATAVLFAREG------------AKVTITGRHAERLEETRQQILAAGVSE 57
Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
           +       V  +  DV   A   ++ +  + +FG +DI +NNAG           T + I
Sbjct: 58  QN------VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSI 111
Query: 153 EQIVST---NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           E   +T   NL   I  T++A+  +      G I N+    SG  +TP    Y   K  +
Sbjct: 112 ESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPYYSIAKAAI 169
Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLT 237
            Q   +   +  +  + V++ SPG+V T
Sbjct: 170 DQYTRNTAIDLIQHGIRVNSISPGLVAT 197

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 19/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++T ST G+G A+AR     G                V  L+    EG+           
Sbjct: 19  LVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQ---GEGL----------- 64
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
               V G  C V +  D ++L   AV   G IDI ++NA  N  F  ++  T E  ++ +
Sbjct: 65  ---SVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 121
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+    L T+  +  M  + +GG    +  + +  S +P  + Y  +K  L  L  +L
Sbjct: 122 DINVKAPALMTKAVVPEM--EKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTL 179
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             E     + V+  +PG++ T  
Sbjct: 180 AIELAPRNIRVNCLAPGLIKTSF 202

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 84  GMMAAGGSSKKN------LVHAKVAG-----IACDVCEPADVQKLSNFAVNEFGSIDIWI 132
           GM  A   S++N      L+H + AG      A DV +    ++ +   + +FG +D+ I
Sbjct: 49  GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLI 108
Query: 133 NNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG 192
           NNAG  +     ++ T  + + ++ T+L      T++ +  M ++ + G I N+ G+ +G
Sbjct: 109 NNAGITRD-ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNI-GSVNG 165
Query: 193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
                  A Y S K G+     +L  E+ +  + V+T SPG + T ++
Sbjct: 166 SRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           VITGS+ G+G A+A  F   G              + V    + L E        S K  
Sbjct: 11  VITGSSSGIGLAIAEGFAKEG-----------AHIVLVARQVDRLHEA-----ARSLKEK 54
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              +V  +A DV  P  V  +     + FG  DI +NNAGT    + +++  +E+ +   
Sbjct: 55  FGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQFYW 113
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQA 214
              ++ ++   R  +  MR +  G  I N     S  +  PL    +Y  TK  L     
Sbjct: 114 ELLVMAAVRLARGLVPGMRARGGGAIIHN----ASICAVQPLWYEPIYNVTKAALMMFSK 169
Query: 215 SLFKESKRSKVGVHTASPGMVLT 237
           +L  E  +  + V+  +PG++LT
Sbjct: 170 TLATEVIKDNIRVNCINPGLILT 192

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 19/206 (9%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           + ITG+T G G+A AR F  +G              + +T   E   + +  AG  S K 
Sbjct: 24  LFITGATSGFGEACARRFAEAG------------WSLVLTGRREERLQAL--AGELSAKT 69
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +V  +  DV + A      +    EF ++   INNAG   G  P      ++ +  
Sbjct: 70  ----RVLPLTLDVRDRAAXSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTX 125
Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           V TN+ G +  TR  +  +     G  I N+ G+ +G    P + VYG TK  + Q   +
Sbjct: 126 VDTNIKGLLYSTRLLLPRLIAHGAGASIVNL-GSVAGKWPYPGSHVYGGTKAFVEQFSLN 184
Query: 216 LFKESKRSKVGVHTASPGMVLTDLLL 241
           L  + + + V V    PG+  ++  L
Sbjct: 185 LRCDLQGTGVRVTNLEPGLCESEFSL 210

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  +ITG++RG+G+A+A      G                V E        ++A  G+  
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGA-- 59
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
            NL+ A+ A              L + A    G +D  +NNAG  +    L++  +E+ E
Sbjct: 60  -NLLEAEAA------------TALVHQAAEVLGGLDTLVNNAGITRD-TLLVRMKDEDWE 105
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  NL      TREA+++M  + + G I N+     G    P  A Y ++K GL    
Sbjct: 106 AVLEANLSAVFRTTREAVKLMM-KARFGRIVNITSV-VGILGNPGQANYVASKAGLIGFT 163
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            ++ KE  +  + V+  +PG + T++
Sbjct: 164 RAVAKEYAQRGITVNAVAPGFIETEM 189

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++ G+G A+A  +  +G              +   ++ + L +  MAA  ++  N 
Sbjct: 38  LVTGASYGIGFAIASAYAKAG------------ATIVFNDINQELVDRGMAAYKAAGIN- 84
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                 G  CDV +   +Q +     +E G IDI +NNAG  +   P+++ T  +  Q++
Sbjct: 85  ----AHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV-PMIEMTAAQFRQVI 139
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             +L    + ++  +  M  +   G I N+    S      ++A Y + K GL+ L  ++
Sbjct: 140 DIDLNAPFIVSKAVIPSMIKKGH-GKIINICSMMSELGRETVSA-YAAAKGGLKMLTKNI 197
Query: 217 FKESKRSKVGVHTASPGMVLT 237
             E   + +  +   PG + T
Sbjct: 198 ASEYGEANIQCNGIGPGYIAT 218

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 20/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+ RG+G+ +A E    G              +      E+ +E + A     KKN 
Sbjct: 33  LVTGAGRGIGREMAMELGRRG----------CKVIVNYANSTESAEEVVAAI----KKNG 78
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
             A        V E  D+ ++   AV  FG +DI  +N+G    F  +   T EE +++ 
Sbjct: 79  SDAACVKANVGVVE--DIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVF 135
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + N  G     REA + +     GG +  M        + P  AVY  +K  +      +
Sbjct: 136 TINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             +    K+ V+  +PG + TD+
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDM 215

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG+ RG+G+ +A E    G              +      E+ +E + A     KKN 
Sbjct: 33  LVTGAGRGIGREMAMELGRRG----------CKVIVNYANSTESAEEVVAAI----KKN- 77
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
             +  A +  +V    D+ ++   AV  FG +DI  +N+G    F  +   T EE +++ 
Sbjct: 78  -GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVF 135
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           + N  G     REA + +     GG +  M        + P  AVY  +K  +      +
Sbjct: 136 TINTRGQFFVAREAYKHLE---IGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
             +    K+ V+  +PG + TD+
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDM 215

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG  +G+G+ ++ +    G                + + EE   E +     + +K +
Sbjct: 6   MVTGGAQGIGRGISEKLAADG---------FDIAVADLPQQEEQAAETIKLIEAADQKAV 56
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                  +  DV + A+     + A  + G  D+ +NNAG  +  KPLL+ T E+++QI 
Sbjct: 57  F------VGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIY 109
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           S N+       + A R   +    G I N     +     P+ + Y +TK  +R L  + 
Sbjct: 110 SVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI-QGFPILSAYSTTKFAVRGLTQAA 168
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
            +E       V+  +PG+V T +
Sbjct: 169 AQELAPKGHTVNAYAPGIVGTGM 191

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVG 162
           +  DV +PA  +   + AV  FG + + +NNAG  N G   +  +   E ++I+  NL G
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTG 115
Query: 163 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 222
             L  R  ++ M++  + G I N+     G + T     Y +TK  +R L  S   E   
Sbjct: 116 VFLGIRAVVKPMKEAGR-GSIINISSI-EGLAGTVACHGYTATKFAVRGLTKSTALELGP 173
Query: 223 SKVGVHTASPGMVLTDL 239
           S + V++  PG+V T +
Sbjct: 174 SGIRVNSIHPGLVKTPM 190

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGS 163
           I CDV +  DV+ L +  +  FG +D  +NNAG +   +   + + +   Q++  NL+G+
Sbjct: 59  ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGT 118
Query: 164 ILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES 220
              T+ A+  +R     G++ N+    GA     + P    Y +TK  +  +  +L  + 
Sbjct: 119 YTLTKLALPYLRK--SQGNVINISSLVGAIGQAQAVP----YVATKGAVTAMTKALALDE 172
Query: 221 KRSKVGVHTASPGMVLTDL 239
               V V+  SPG + T L
Sbjct: 173 SPYGVRVNCISPGNIWTPL 191

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R V++TG   G+GK +  +FL +GD                     ++ E   A     +
Sbjct: 3   RGVIVTGGGHGIGKQICLDFLEAGDKVCFI----------------DIDEKRSADFAKER 46
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEI 152
            NL +        DV +P  ++K   +A+ +   ID+ +NNA   +G K +L     EE 
Sbjct: 47  PNLFY-----FHGDVADPLTLKKFVEYAMEKLQRIDVLVNNAC--RGSKGILSSLLYEEF 99
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
           + I+S  L        E  R+ RD+     G I N+  +     S P +  Y S K G+ 
Sbjct: 100 DYILSVGLKAPY----ELSRLCRDELIKNKGRIINI-ASTRAFQSEPDSEAYASAKGGIV 154
Query: 211 QLQASLFKESKRSKVGVHTASPGMV 235
            L  +L   S    V V+  +PG +
Sbjct: 155 ALTHAL-AMSLGPDVLVNCIAPGWI 178

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 87/223 (39%), Gaps = 19/223 (8%)
Query: 23  MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK 82
           M L ++     + +VI G  + LG   A+ F L                 T  +L++ L+
Sbjct: 1   MSLTKYHDLKNKVIVIAGGIKNLGALTAKTFALES-VNLVLHYHQAKDSDTANKLKDELE 59
Query: 83  EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 142
           +               AKVA    D+    +V KL +FA  EFG +DI IN  G     K
Sbjct: 60  DQG-------------AKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLK-K 105
Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 202
           P+++ +  E + + + N   +    ++A + M      GHI  +       + T   + Y
Sbjct: 106 PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNGHIITI-ATSLLAAYTGFYSTY 161
Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
              K  +     +  KE  + ++ V+  +PG + T       T
Sbjct: 162 AGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET 204

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 30/247 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R V++TG+  G+G+A A  F   G              + V ++   L +G  A+GGS+ 
Sbjct: 28  RVVIVTGAGGGIGRAHALAFAAEG------------ARVVVNDIGVGL-DGSPASGGSAA 74
Query: 94  KNLVHAKVAGIACDVCEPADVQK------LSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 147
           +++V    A     V + ++V        L   AV  FG +D+ +NNAG  +  + +   
Sbjct: 75  QSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANT 133
Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNMDGAGSGGSSTPLTAVY 202
           + EE + +++ +L G     R A    R   K      G I N   +G+G   +     Y
Sbjct: 134 SEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS-SGAGLQGSVGQGNY 192
Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGM--VLTDLLLSGSTIQNKQMFNIICELPE 260
            + K G+  L      E  R  V V+  +P     +T+ + +       Q F+ +   PE
Sbjct: 193 SAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAMA--PE 250
Query: 261 TVARTLV 267
            V+  +V
Sbjct: 251 NVSPLVV 257

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           VITG   G+G+A+A  F + G              +   E E  ++              
Sbjct: 11  VITGGANGIGRAIAERFAVEG------ADIAIADLVPAPEAEAAIRN------------- 51
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
           +  +V  + CDV +P DV+      ++ FG  DI +NNAG      P  + T E+ ++  
Sbjct: 52  LGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTF 110
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
             N+    L  +  +  M+ +   G I N+            T  Y STK        +L
Sbjct: 111 EINVDSGFLMAKAFVPGMK-RNGWGRIINLTSTTYWLKIEAYTH-YISTKAANIGFTRAL 168
Query: 217 FKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 268
             +  +  + V+  +P +V T    + +      MF+++  + + + R  VP
Sbjct: 169 ASDLGKDGITVNAIAPSLVRTATTEASAL---SAMFDVLPNMLQAIPRLQVP 217

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 34/230 (14%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+T G+G+A+AR F   G                    E+ LKE    A    K
Sbjct: 28  RKALVTGATGGIGEAIARCFHAQGAIVGLHGTR-----------EDKLKE---IAADLGK 73
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
              V       + ++ +   +++L+  A  E   IDI +NNAG T  G    ++  +++ 
Sbjct: 74  DVFV------FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGL--FVRMQDQDW 125
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + +++ NL  +   TRE +  M  + + G I N+     G    P    Y + K GL   
Sbjct: 126 DDVLAVNLTAASTLTRELIHSMM-RRRYGRIINITSI-VGVVGNPGQTNYCAAKAGLIGF 183
Query: 213 QASLFKESKRSKVGVHTASPGMV---LTDLLLSGSTIQNKQMFNIICELP 259
             +L +E     + V+  +PG +   +TD L        KQ   I+  +P
Sbjct: 184 SKALAQEIASRNITVNCIAPGFIKSAMTDKL------NEKQKEAIMAMIP 227

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 16/231 (6%)
Query: 34  RNVVITGSTRGLGKALAREFLLSG-DXXXXXXXXXXXXXMTVTELE-ENLKEGMMAAGGS 91
           R   ITG+ RG G++ A      G D             +T      E+L E        
Sbjct: 16  RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75
Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
            +K L          DV + A +++L    + +FG +D+ + NAG    +  + + T+E+
Sbjct: 76  GRKALTRV------LDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQ 128
Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            + ++  NL G+    R  +  M +   GG I  +  + +G  +TP    Y ++K GL  
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVS-SSAGLKATPGNGHYSASKHGLTA 187
Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 262
           L  +L  E     + V++  P  V T +      I+ + M  I    P  V
Sbjct: 188 LTNTLAIELGEYGIRVNSIHPYSVETPM------IEPEAMMEIFARHPSFV 232

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R V++TG+  GLG+A A  F   G              + V +L  + K   +  G S+ 
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERG------------ALVVVNDLGGDFK--GVGKGSSAA 55
Query: 94  KNLVHA--KVAGIACDVCEPADV-QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
             +V    +  G A    +  +  +KL   A++ FG ID+ +NNAG  +  +   + ++E
Sbjct: 56  DKVVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD-RSFSRISDE 114
Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
           + + I   +L GS   TR A    + Q  G  I     +G  G+     A Y + K GL 
Sbjct: 115 DWDIIQRVHLRGSFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFG--QANYSAAKLGLL 172
Query: 211 QLQASLFKESKRSKVGVHTASP 232
            L  +L  E +++ +  +T +P
Sbjct: 173 GLANTLVIEGRKNNIHCNTIAP 194

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 28/213 (13%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG T+G+G+ +A  F  +G                  EL E      + AG    
Sbjct: 42  RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE------LGAG---- 91
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V G+  DV +P      +   V+ FG++D+   NAG     + L   T E++ 
Sbjct: 92  ------NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEAR-LDTMTPEQLS 144
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAV-----YGSTKCG 208
           +++  N+ G++   +  +  +    +G  I      G      P+T       YG++K  
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITG------PVTGYPGWSHYGASKAA 198
Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 241
                 +   E     V V+   PG +LT+ L+
Sbjct: 199 QLGFMRTAAIELAPRGVTVNAILPGNILTEGLV 231

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 38/219 (17%)
Query: 23  MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK 82
           MV +    AG + V++TG + G+G A+A +F   G                     E + 
Sbjct: 2   MVFQHDIYAG-QQVLVTGGSSGIGAAIAMQFAELG--------------------AEVVA 40
Query: 83  EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 142
            G+ A G  + +   H ++     D+ +   +Q+L          +D+ +NNAG ++  +
Sbjct: 41  LGLDADGVHAPR---HPRIRREELDITDSQRLQRL----FEALPRLDVLVNNAGISRDRE 93
Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTA 200
              ++     E+++  NL  ++L ++ A  ++    +GG I N+    S  G +  P   
Sbjct: 94  ---EYDLATFERVLRLNLSAAMLASQLARPLLAQ--RGGSILNIASMYSTFGSADRP--- 145
Query: 201 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
            Y ++K  + QL  SL  E    ++ V+  +PG + T L
Sbjct: 146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPL 184

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           +NV+ITG+++G+G  +A+     G               +  E+ + LK  +   G    
Sbjct: 30  KNVLITGASKGIGAEIAKTLASMG-------LKVWINYRSNAEVADALKNELEEKG---- 78
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K A I  D    +D  +     V   G +   +NNAG  +  K  ++   E+  
Sbjct: 79  -----YKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRD-KLAIKMKTEDFH 132
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA----GSGGSSTPLTAVYGSTKCGL 209
            ++  NL  + +  REA++VM  + + G + N+       G+ G +      Y ++K G+
Sbjct: 133 HVIDNNLTSAFIGCREALKVM-SKSRFGSVVNVASIIGERGNMGQTN-----YSASKGGM 186
Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             +  S   E     +  ++ +PG + TD+
Sbjct: 187 IAMSKSFAYEGALRNIRFNSVTPGFIETDM 216

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVG 162
           +  DV +PA  +   + AV  FG + + +NNAG  N G   +  +   E ++I+  NL G
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTG 115
Query: 163 SILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR 222
             L  R  ++  ++  + G I N+     G + T     Y +TK  +R L  S   E   
Sbjct: 116 VFLGIRAVVKPXKEAGR-GSIINISSI-EGLAGTVACHGYTATKFAVRGLTKSTALELGP 173
Query: 223 SKVGVHTASPGMVLT 237
           S + V++  PG+V T
Sbjct: 174 SGIRVNSIHPGLVKT 188

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 6/136 (4%)
Query: 124 EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI 183
           E G ID+ +NNAG  +      + T E+ + ++ TNL      T++ +  M ++  G  I
Sbjct: 88  EVGEIDVLVNNAGITRDV-VFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG-RI 145
Query: 184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
            N+    +G         Y + K G+     SL +E     V V+T SPG + TD++   
Sbjct: 146 INISSV-NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV--- 201
Query: 244 STIQNKQMFNIICELP 259
             I+   +  I+  +P
Sbjct: 202 KAIRPDVLEKIVATIP 217

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG T G+G A+A +F+  G              + +T+   ++ E    + G+     
Sbjct: 10  IITGGTLGIGLAIATKFVEEG------------AKVMITDRHSDVGEKAAKSVGTPD--- 54
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
              ++     D  +     KL +     FG +   +NNAG     K + + T  E  +++
Sbjct: 55  ---QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN-KSVEETTTAEWRKLL 110
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL--QA 214
           + NL G    TR  ++ M+++  G  I NM     G    P    Y ++K  +R +   A
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-EGFVGDPSLGAYNASKGAVRIMSKSA 169
Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
           +L    K   V V+T  PG + T L+
Sbjct: 170 ALDCALKDYDVRVNTVHPGYIKTPLV 195

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 83/218 (38%), Gaps = 23/218 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSG-DXXXXXXXXXXXXXMTVTEL-EENLKEGMMAAGGS 91
           R  ++TG   G+G+A A  +   G D               V  L EE  ++ ++  G  
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPG-- 107
Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                          D+ + +  + L + A    G +DI    AG       +   T+E+
Sbjct: 108 ---------------DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ 152
Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            +Q  + N+      T+EA+ ++   PKG  I            +P    Y +TK  +  
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLL---PKGASIITTSSI-QAYQPSPHLLDYAATKAAILN 208
Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK 249
               L K+     + V+  +PG + T L +SG   Q+K
Sbjct: 209 YSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDK 246

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 20/140 (14%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGM--MAAGGS 91
           + V+ITGS++G+G A AR F  +G              +   +   N+ E +  M A G 
Sbjct: 8   KRVLITGSSQGIGLATARLFARAG----------AKVGLHGRKAPANIDETIASMRADGG 57
Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                        AC        Q+L +  V +FG ID+ INNAG   G KPL +  +  
Sbjct: 58  DAAFFAADLATSEAC--------QQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTF 109
Query: 152 IEQIVSTNLVGSILCTREAM 171
            + ++  N+   ++ T+ A+
Sbjct: 110 YDAVMDANIRSVVMTTKFAL 129

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 22/206 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG ++G+G A+AR    +G                V  LE          GG + 
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---------GGFA- 62
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV + A V      A++  G  D+   NAG +   +P +  T+EE +
Sbjct: 63  ----------VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWD 111
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
                N  G  L  + A R        G I N   + +     PL A Y ++K  +    
Sbjct: 112 FNFDVNARGVFLANQIACRHFLASNTKGVIVNT-ASLAAKVGAPLLAHYSASKFAVFGWT 170
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L +E     + V+   PG V T +
Sbjct: 171 QALAREMAPKNIRVNCVCPGFVKTAM 196

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 101/220 (45%), Gaps = 29/220 (13%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLK--EGMMAAGGSSK 93
           V+ITG+  GLGK  A+ F   G              + V + ++  K  + + AAGG + 
Sbjct: 325 VLITGAGAGLGKEYAKWFAKYG------------AKVVVNDFKDATKTVDEIKAAGGEAW 372
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
            +           DV +  D + +    ++++G+IDI +NNAG  +  +   + + +E +
Sbjct: 373 PD---------QHDVAK--DSEAIIKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWD 420
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +   +L+G+   +R A     ++ + G I N+    SG       A Y S+K G+  L 
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITST-SGIYGNFGQANYSSSKAGILGLS 478
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 253
            ++  E  ++ + V+  +P    T + LS    Q+K +++
Sbjct: 479 KTMAIEGAKNNIKVNIVAP-HAETAMTLSIMREQDKNLYH 517

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 99  AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 158
           A+   I  D+ +P++V  L + AV+ FG +D  ++N+G    +   L+ T E  +++ + 
Sbjct: 71  AQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNL 129
Query: 159 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK 218
           N  G     ++ ++  R   +GG I       +  +  P  A+Y  +K  +     +   
Sbjct: 130 NTRGQFFVAQQGLKHCR---RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAV 186
Query: 219 ESKRSKVGVHTASPGMVLTDLL 240
           +     V V+  +PG V TD+ 
Sbjct: 187 DCGAKGVTVNCIAPGGVKTDMF 208

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 20/203 (9%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           ++TG++RG+G+A+A E    G                   L+ N  EG            
Sbjct: 31  LVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEG------------ 78
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIV 156
                AG+  DV     V           G   I +NNAG  +    L++  ++E   +V
Sbjct: 79  -----AGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRD-NLLVRMKDDEWFDVV 132
Query: 157 STNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASL 216
           +TNL      ++  +R M  + + G I N+ G+  G         Y + K GL     +L
Sbjct: 133 NTNLNSLYRLSKAVLRGM-TKARWGRIINI-GSVVGAMGNAGQTNYAAAKAGLEGFTRAL 190
Query: 217 FKESKRSKVGVHTASPGMVLTDL 239
            +E     + V+  +PG + TD+
Sbjct: 191 AREVGSRAITVNAVAPGFIDTDM 213

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 88/211 (41%), Gaps = 27/211 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVT----ELEENLKEGMMAAG 89
           + V+ITGS+ G+G+  A  F   G              +T+T    E  E  ++ ++ +G
Sbjct: 7   KTVIITGSSNGIGRTTAILFAQEG------------ANVTITGRSSERLEETRQIILKSG 54
Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
            S K+      V  +  DV       ++ N  + +FG ID+ +NNAG           T+
Sbjct: 55  VSEKQ------VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTD 108
Query: 150 EEIE---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 206
           + I+   + +  NL   I  T++    +      G I N+    +G  + P    Y   K
Sbjct: 109 QGIDIYHKTLKLNLQAVIEMTKKVKPHLV--ASKGEIVNVSSIVAGPQAQPDFLYYAIAK 166
Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLT 237
             L Q   S   +  +  + V++ SPGMV T
Sbjct: 167 AALDQYTRSTAIDLAKFGIRVNSVSPGMVET 197

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Query: 99  AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST 158
           AKV  +  DV +   V       V   G +DI +NNAG      P+      +  +++ T
Sbjct: 56  AKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDT 114
Query: 159 NLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLF 217
           NL+G +  TR A+  ++R +   G +  M    +G  +    AVY +TK G+     +L 
Sbjct: 115 NLLGLMYMTRAALPHLLRSK---GTVVQMSSI-AGRVNVRNAAVYQATKFGVNAFSETLR 170
Query: 218 KESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN 253
           +E     V V    PG   T+L    +    K+M+ 
Sbjct: 171 QEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE 206

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 29/139 (20%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG++ G+G+A+A  F+  G                V +L              S  +
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGS--------------KVIDL--------------SIHD 42
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              AK   I CDV  P  V+   +    E+GSI + +NNAG  + +  +   +  E  +I
Sbjct: 43  PGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRI 101
Query: 156 VSTNLVGSILCTREAMRVM 174
           +  NL G    ++ A+  M
Sbjct: 102 IDVNLFGYYYASKFAIPYM 120

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 4/143 (2%)
Query: 99  AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK-PLLQFTNEEIEQIVS 157
           A+V  +  D+ + +  Q   +  V EFG ID  +NNAG     +   L    E  + IV 
Sbjct: 79  ARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVG 138
Query: 158 TNLVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            NL G++  T+  ++  +  D      I N+    S   ++P    Y  +K GL      
Sbjct: 139 VNLRGTVFFTQAVLKAXLASDARASRSIINITSV-SAVXTSPERLDYCXSKAGLAAFSQG 197
Query: 216 LFKESKRSKVGVHTASPGMVLTD 238
           L      + + V    PG++ +D
Sbjct: 198 LALRLAETGIAVFEVRPGIIRSD 220

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 29/139 (20%)
Query: 36  VVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG++ G+G+A+A  F+  G                V +L              S  +
Sbjct: 18  VIVTGASMGIGRAIAERFVDEGS--------------KVIDL--------------SIHD 49
Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              AK   I CDV  P  V+   +    E+GSI + +NNAG  + +  +   +  E  +I
Sbjct: 50  PGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGI-ESYGKIESMSMGEWRRI 108
Query: 156 VSTNLVGSILCTREAMRVM 174
           +  NL G    ++ A+  M
Sbjct: 109 IDVNLFGYYYASKFAIPYM 127

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 84/209 (40%), Gaps = 36/209 (17%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEEN-LKEGMMAAGGSS 92
           + V+ITG+  G+G+A    F   G              +   ++EE  L+E   A G   
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEG------------ARLVACDIEEGPLREAAEAVGAHP 53
Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFK---PLLQFT 148
                      +  DV +PA V++    A+   G +D  ++ AG T   F    PL    
Sbjct: 54  -----------VVXDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKXPL---- 98
Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            E+ E ++  NL GS L  + A    R++  G  +        G       A Y ++  G
Sbjct: 99  -EDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRVYLGNLG---QANYAASXAG 154
Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLT 237
           +  L  +L  E  R  + V+T +PG + T
Sbjct: 155 VVGLTRTLALELGRWGIRVNTLAPGFIET 183

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/202 (21%), Positives = 84/202 (41%), Gaps = 23/202 (11%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG   G+G+A A  F  +G              + V ++ E+    +        
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNG------------AYVVVADVNEDAAVRVA------- 68
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
            N + +K  G+  DV    D +        ++G +D+ +NNAG       ++    E  +
Sbjct: 69  -NEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWD 126
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +I S N+ G  LC++  + V R +  GG I N     +  +    TA Y ++K  +  L 
Sbjct: 127 RIXSVNVKGIFLCSKYVIPVXR-RNGGGSIINTTSYTATSAIADRTA-YVASKGAISSLT 184
Query: 214 ASLFKESKRSKVGVHTASPGMV 235
            +   +  +  + V+  +PG +
Sbjct: 185 RAXAXDHAKEGIRVNAVAPGTI 206

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 31/215 (14%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVT-----ELEENLKEGMMAA 88
           ++V+ITGS+ G+G++ A  F   G              +T+T      LEE  K+ ++ A
Sbjct: 27  KSVIITGSSNGIGRSAAVIFAKEG------------AQVTITGRNEDRLEET-KQQILKA 73
Query: 89  GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 148
           G  ++K      +  +  DV E +    + N  + +FG IDI +NNAG N         T
Sbjct: 74  GVPAEK------INAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGAN--LADGTANT 125
Query: 149 NEEIEQIVST---NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 205
           ++ +E    T   N    I  T++    +      G I N+    +G  +      Y   
Sbjct: 126 DQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPYYACA 183
Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           K  L Q       +  +  V V++ SPG V T  +
Sbjct: 184 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM 218

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 159
           K  G+ C+V +    + +   A+++FG I + +NNAG   G KP       + E     N
Sbjct: 62  KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG-GGGPKP-FDMPMSDFEWAFKLN 119
Query: 160 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 219
           L      ++ A   M+ +  GG I N+    +G ++    A YGS+K  +  L  ++  +
Sbjct: 120 LFSLFRLSQLAAPHMQ-KAGGGAILNISSM-AGENTNVRMASYGSSKAAVNHLTRNIAFD 177
Query: 220 SKRSKVGVHTASPGMVLTDLL 240
                + V+  +PG + TD L
Sbjct: 178 VGPMGIRVNAIAPGAIKTDAL 198

>pdb|3L6E|A Chain A, Crystal Structure Of Putative Short Chain DehydrogenaseREDUCTASE Family Oxidoreductase From Aeromonas Hydrophila Subsp. Hydrophila Atcc 7966 Length = 235

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 101 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL 160
           V GI  D+    DV      AV   G  ++ ++ AGT + F P+  +T E+I ++  +NL
Sbjct: 51  VIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVXESNL 109
Query: 161 VGSILCTREAMRVMRDQPKGGHIFN-MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 219
           V +IL  ++ +R++ +  +GG + N +  A   G +    ++Y ++K G R    SL  E
Sbjct: 110 VSTILVAQQTVRLIGE--RGGVLANVLSSAAQVGKAN--ESLYCASKWGXRGFLESLRAE 165
Query: 220 SKRSKV 225
            K S +
Sbjct: 166 LKDSPL 171

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 22/206 (10%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMT-VTELEENLKEGMMAAGGSS 92
           +   +TG +RG+G A+A+   L G                 V+E+E+        AGG  
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ--------AGG-- 81
Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +   I  D  +   +++     V   G +DI +N+AG      PL + T  + 
Sbjct: 82  -------RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHS-APLEETTVADF 133
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +++ + N     +  R A R + D   GG I  +    +     P  ++Y ++K  L  L
Sbjct: 134 DEVXAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASKAALAGL 190
Query: 213 QASLFKESKRSKVGVHTASPGMVLTD 238
              L ++     + V+   PG   TD
Sbjct: 191 TKGLARDLGPRGITVNIVHPGSTDTD 216

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 34/214 (15%)
Query: 28  HCKAGPRNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMA 87
           H     +NV +TG+ +G+G A A  F+ +G                VT  ++   +    
Sbjct: 2   HMDFSGKNVWVTGAGKGIGYATALAFVEAG--------------AKVTGFDQAFTQ---- 43
Query: 88  AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF 147
                         A    DV + A V ++    + E   +D  +N AG  +      Q 
Sbjct: 44  ---------EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQL 93
Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGST 205
           + E+ +Q  + N+ G+    ++ M   R Q +GG I  +    S  + TP    + YG++
Sbjct: 94  SKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTV---ASDAAHTPRIGMSAYGAS 149
Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           K  L+ L  S+  E   S V  +  SPG   TD+
Sbjct: 150 KAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 37  VITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSKKNL 96
           +ITG+  G+G   +R    +G              + + +L E    G   A  S  +  
Sbjct: 15  IITGACGGIGLETSRVLARAG------------ARVVLADLPETDLAG---AAASVGRGA 59
Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQI 155
           VH  V     D+     V+ L +F ++ FG +DI  NNA  +     L+ Q T +  +  
Sbjct: 60  VHHVV-----DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDT 114
Query: 156 VSTNLVGSILCTREAM-RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
            + N  G++L  + A+ R++     GG I N+  A +  ++  ++  Y  TK  +  L  
Sbjct: 115 FTVNARGTMLMCKYAIPRLI--SAGGGAIVNISSA-TAHAAYDMSTAYACTKAAIETLTR 171
Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSG 243
            +  +  R  V  +  +PG+V T  L  G
Sbjct: 172 YVATQYGRHGVRCNAIAPGLVRTPRLEVG 200

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 26/209 (12%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           + V++TG  RG+G+A+A+ F   G              + + +L    KE   A GG   
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREG------------ALVALCDLRPEGKEVAEAIGG--- 51
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A    D+ +  +  +    A    G +D+ +NNA         L     E  
Sbjct: 52  --------AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAI-AAPGSALTVRLPEWR 102
Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL   +  +  A R MR +  GG I N+     G  +    A Y ++K GL  L 
Sbjct: 103 RVLEVNLTAPMHLSALAAREMR-KVGGGAIVNVASV-QGLFAEQENAAYNASKGGLVNLT 160
Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            SL  +    ++ V+  +PG + T+ +L 
Sbjct: 161 RSLALDLAPLRIRVNAVAPGAIATEAVLE 189

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 79/204 (38%), Gaps = 24/204 (11%)
Query: 34  RNVVITGSTRGLGKALAREFLLSGDXXXXXXXXXXXXXMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG +RG+G+ +A+  L +G               T T L                
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS--------------- 74
Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEI 152
               +     I  D+   A  ++L+  A+ E  + +DI +NNAGT+ G   L  +     
Sbjct: 75  ---AYGDCQAIPADLSSEAGARRLAQ-ALGELSARLDILVNNAGTSWGAA-LESYPVSGW 129
Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKG---GHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
           E+++  N+     C ++ + ++R          + N+       +       YG +K  L
Sbjct: 130 EKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAAL 189
Query: 210 RQLQASLFKESKRSKVGVHTASPG 233
            QL   L KE     + V+  +PG
Sbjct: 190 HQLSRMLAKELVGEHINVNVIAPG 213

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 121 AVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG 180
           A+   G +D+ +NNA      +P L+ T E  ++  S NL      ++   R M ++   
Sbjct: 70  ALGGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVP 128
Query: 181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           G I N+        + P    Y STK  +  L  ++  E    K+ V++ +P +VLTD+
Sbjct: 129 GSIVNVSSM-VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 3/151 (1%)
Query: 100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTN 159
           +   I+ DV +   +  ++   +  +G +D+ +NNAG  +      + T  E+  +   +
Sbjct: 52  RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELH 110
Query: 160 LVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE 219
           + G    TR  +   R++   G + N+   G   S    +A Y +TK  L QL   L  E
Sbjct: 111 VFGPARLTRALLPQXRER-GSGSVVNISSFGGQLSFAGFSA-YSATKAALEQLSEGLADE 168
Query: 220 SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ 250
                + V    PG   T+L   G+   +++
Sbjct: 169 VAPFGIKVLIVEPGAFRTNLFGKGAAYFSEE 199

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	368
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-45
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	6e-41
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-40
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-40
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-40
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-40
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-39
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	5e-39
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-38
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	8e-38
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-37
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-37
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	3e-37
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-37
3imf_A	257	Short chain dehydrogenase; structural genomics, in	4e-37
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	5e-37
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	5e-37
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-37
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	6e-37
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-37
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-37
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	1e-36
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-36
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-36
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-36
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	5e-36
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	7e-36
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	7e-36
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	8e-36
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-35
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-35
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-35
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-35
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	5e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	5e-35
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	6e-35
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	6e-35
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-34
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-34
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-34
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-34
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-34
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-34
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	4e-34
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-34
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-34
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-34
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-34
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	6e-34
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-33
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	1e-33
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	1e-33
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-33
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-33
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-33
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	5e-33
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	6e-33
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	6e-33
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	6e-33
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	7e-33
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-33
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	7e-33
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	9e-33
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	9e-33
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-32
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-32
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-32
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-32
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-32
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-32
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-32
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-32
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	3e-32
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-32
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	4e-32
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-32
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-32
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-32
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-32
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	6e-32
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-31
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-31
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-31
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-31
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-31
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-31
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-31
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-31
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-31
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-31
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-31
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-31
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-31
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	5e-31
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-31
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	6e-31
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	9e-31
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	9e-31
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	9e-31
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-30
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-30
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-30
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-30
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	2e-30
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	3e-30
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-30
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-30
4dqx_A	277	Probable oxidoreductase protein; structural genomi	6e-30
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-29
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-29
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-29
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-29
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-29
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-29
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	5e-29
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-28
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	1e-28
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-28
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-28
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-28
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-28
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-28
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-27
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-27
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-27
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-27
3rih_A	293	Short chain dehydrogenase or reductase; structural	5e-27
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-26
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-26
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	3e-26
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-25
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-25
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	2e-25
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-25
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-25
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	4e-25
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	5e-25
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	8e-25
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-24
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	2e-24
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-24
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-24
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-24
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	1e-23
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-23
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	1e-23
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-23
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	1e-23
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-23
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-23
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-23
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	5e-23
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-23
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	7e-23
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	8e-23
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-23
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-22
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-22
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	2e-22
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-22
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-22
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	4e-22
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-22
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	8e-22
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	2e-21
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-21
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-21
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-21
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	7e-21
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-20
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	5e-18
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-20
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-20
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	2e-20
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-20
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	7e-20
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-20
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-19
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-19
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	9e-19
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-16
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	1e-16
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-16
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-15
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-13
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-06
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	5e-05
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	8e-04

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  155 bits (393), Expect = 1e-45
 Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 29/234 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
            ++++TG+  GLG+AL    +  G +V +  R  + ++     L           G    
Sbjct: 4   GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----------GN--- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V GI  D+    DV      AV   G  ++ ++ AGT + F P+  +T E+I 
Sbjct: 50  ------AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIR 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ +NLV +IL  ++ +R++ ++  GG + N+  + +        ++Y ++K G+R   
Sbjct: 103 RVMESNLVSTILVAQQTVRLIGER--GGVLANV-LSSAAQVGKANESLYCASKWGMRGFL 159

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
            SL  E K S + +    P  + ++   +   +            PE  A  ++
Sbjct: 160 ESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMT-----PEDAAAYML 208

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  143 bits (363), Expect = 6e-41
 Identities = 52/235 (22%), Positives = 98/235 (41%), Gaps = 28/235 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG+++G+G  +A      G RVV+ +RS +++     E+  + K             
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHV----------- 58

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  D+ +             ++G++DI +N A         L    +   +I
Sbjct: 59  ---QEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAM--FMDGSLSEPVDNFRKI 113

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQ 213
           +  N++      +    +M+ Q K G+IFN+    S           +YGSTK  L  L 
Sbjct: 114 MEINVIAQYGILKTVTEIMKVQ-KNGYIFNV---ASRAAKYGFADGGIYGSTKFALLGLA 169

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMFNIICELPETVARTLV 267
            SL++E     + V T  PG V TD+   +G+  ++++M       P+ +  T+ 
Sbjct: 170 ESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKDEEMIQ-----PDDLLNTIR 219

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  143 bits (363), Expect = 1e-40
 Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 18/208 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG   G+G+ +A+     G  VV+  R  + +     E+            G   
Sbjct: 34  RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG--------GRTG--- 82

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V  + CDV +P  V  L      EF  +D+ +NNAG+N    PL + T E+  
Sbjct: 83  -----NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWN 137

Query: 154 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            IV+ NL G+ LCT+ A R+M+ Q P+GG I N  G+ S  +  P +A Y +TK  +  L
Sbjct: 138 GIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINN-GSISAQTPRPNSAPYTATKHAITGL 196

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             S   + +   +       G   TD+ 
Sbjct: 197 TKSTALDGRMHDIACGQIDIGNAATDMT 224

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  142 bits (361), Expect = 1e-40
 Identities = 51/234 (21%), Positives = 85/234 (36%), Gaps = 25/234 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V + G+   +G  +A++F   G  V    R+ E +   V E+E        AAGG     
Sbjct: 10  VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE--------AAGG----- 56

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               ++   + D     +V    N A +    +++ I N G N    P+L+ T+    ++
Sbjct: 57  ----RIVARSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANV-NFPILETTDRVFRKV 110

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
                    +  RE+ R+M      G IF   GA +        A + S K GLR +  S
Sbjct: 111 WEMACWAGFVSGRESARLMLAH-GQGKIFFT-GATASLRGGSGFAAFASAKFGLRAVAQS 168

Query: 216 LFKESKRSKVGV-HTASPGMVLTDLLLSGSTIQNKQMFNIICE---LPETVART 265
           + +E     + V H      V T  +         +      +    P  VA  
Sbjct: 169 MARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGA 222

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  141 bits (359), Expect = 4e-40
 Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 22/208 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+  G+G+A+A     +G  V +A R  ++++ T  E+                
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---------------- 72

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV +P  V+ L    V +FG +D+  NNAGT     P+   T  + +
Sbjct: 73  ----GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWK 128

Query: 154 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           Q+V TNL G  LCT+EA RVM+ Q P+GG I N  G+ S  S  P +A Y +TK  +  L
Sbjct: 129 QVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINN-GSISATSPRPYSAPYTATKHAITGL 187

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             S   + +   +       G   T + 
Sbjct: 188 TKSTSLDGRVHDIACGQIDIGNADTPMA 215

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  140 bits (356), Expect = 8e-40
 Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 21/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++T ST G+G A+AR     G  VVV+SR  E+V  TV  L+          G    
Sbjct: 15  KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQ--------GEGL--- 63

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V G  C V +  D ++L   AVN  G +DI ++NA  N  F  ++  T E  +
Sbjct: 64  ------SVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWD 117

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 212
           +I+  N+  ++L T+  +  M  +  GG +  +           P    Y  +K  L  L
Sbjct: 118 KILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAYHPF--PNLGPYNVSKTALLGL 174

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L  E     + V+  +PG++ T+ 
Sbjct: 175 TKNLAVELAPRNIRVNCLAPGLIKTNF 201

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  140 bits (354), Expect = 2e-39
 Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 21/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TG++RG+G A+AR+    G RVV+ +R  E +R    E+         AAGG   
Sbjct: 30  QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV--------AAGG--- 78

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +    ACD+     +   +   +   G  D+ +NNAG      PL      E +
Sbjct: 79  ------EAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWD 132

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 212
            +++ NL    L  R     M    K GHI N+   AG         A Y ++K GL  L
Sbjct: 133 ALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINISSLAGKNPV--ADGAAYTASKWGLNGL 189

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             S  +E ++ +V V   +PG V T+ 
Sbjct: 190 MTSAAEELRQHQVRVSLVAPGSVRTEF 216

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  139 bits (353), Expect = 5e-39
 Identities = 44/207 (21%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG   G+GK +A   + +G  V++  R+ + +   V ELE     G         
Sbjct: 12  RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANG--------- 62

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +     D+    +  +  +      G +   ++ AG ++   P+ Q  +E   
Sbjct: 63  -----GAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWR 117

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           + V  N+ G++   + A R M     GG    +  + +  ++      YG TK  +  L 
Sbjct: 118 RTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGI-SSIAASNTHRWFGAYGVTKSAVDHLM 175

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
                E   S V V++  PG++ TDL+
Sbjct: 176 QLAADELGASWVRVNSIRPGLIRTDLV 202

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  138 bits (349), Expect = 2e-38
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 16/205 (7%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG   G+GKA+ +E L  G  VV+ASR  E ++    EL+ NL            
Sbjct: 19  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP---TKQA--- 72

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  I C++    +V  L    ++ FG I+  +NN G      P    +++   
Sbjct: 73  ------RVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL-SPAEHISSKGWH 125

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++ TNL G+    +        +  GG I N+      G   PL    G+ + G+  L 
Sbjct: 126 AVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNIIVPTKAGF--PLAVHSGAARAGVYNLT 182

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
            SL  E   S + ++  +PG++ + 
Sbjct: 183 KSLALEWACSGIRINCVAPGVIYSQ 207

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  135 bits (343), Expect = 8e-38
 Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 20/205 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VVI+G    LG  LAR     G  +V+A+R+ E +     ++           G      
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT--------DTGR----- 60

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  D+ + A V  L +  +  +G +D+ INNA      KP    T E +   
Sbjct: 61  ----RALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDA 116

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +   + G++   +     +      G + N+  +     S      Y   K  L  +  +
Sbjct: 117 IELTVFGALRLIQGFTPALE--ESKGAVVNV-NSMVVRHSQAKYGAYKMAKSALLAMSQT 173

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L  E     + V++  PG +    L
Sbjct: 174 LATELGEKGIRVNSVLPGYIWGGTL 198

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  134 bits (340), Expect = 1e-37
 Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 34/240 (14%)

Query: 36  VVITGSTRGLGKALAREF-------LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAA 88
           ++ITG+ +G+G+A+A EF             +V++SR++  +     E          A 
Sbjct: 5   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECR--------AE 56

Query: 89  GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 148
           G              I  D+ + ADV++L+   V  +G ID  +NNAG  + F  L   T
Sbjct: 57  GA---------LTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLT 106

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKC 207
            E+ +  ++TNL G+   T+    +M  Q   GHIF +   A +       +++Y  +K 
Sbjct: 107 EEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATKAF--RHSSIYCMSKF 163

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
           G R L  ++   +++  V +    PG V T +      + ++    ++  +PE +A  +V
Sbjct: 164 GQRGLVETMRLYARKCNVRITDVQPGAVYTPMW---GKVDDEMQALMM--MPEDIAAPVV 218

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  134 bits (341), Expect = 1e-37
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           ++ +ITGS RG+G+A A  ++  G  V +A    E  R    E+           G    
Sbjct: 9   KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----------GP--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV     +       V   G +DI +NNA       P+++ T E  E
Sbjct: 55  ------AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYE 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G++   + A R M  Q +GG I NM  + +G     L A+Y +TK  +  L 
Sbjct: 108 KLFAINVAGTLFTLQAAARQMIAQGRGGKIINM-ASQAGRRGEALVAIYCATKAAVISLT 166

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            S   +  + ++ V+  +PG+V  + 
Sbjct: 167 QSAGLDLIKHRINVNAIAPGVVDGEH 192

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  133 bits (338), Expect = 3e-37
 Identities = 40/204 (19%), Positives = 80/204 (39%), Gaps = 23/204 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           +++TG +RG+GK++           VV   +           E  LK+     G      
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARS---------EAPLKKLKEKYGD----- 50

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  D+ E + +++L N AV   G ID  + NAG  +  + + +      +++
Sbjct: 51  ----RFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKL 106

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              N    +     A+  ++     G++  +  + +          YGS+K  L     +
Sbjct: 107 YDINFFSIVSLVGIALPELKKT--NGNVVFV-SSDACNMYFSSWGAYGSSKAALNHFAMT 163

Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           L  E +  +V     +PG+V TD+
Sbjct: 164 LANEER--QVKAIAVAPGIVDTDM 185

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  133 bits (338), Expect = 3e-37
 Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 19/206 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+GKA+A   +  G  V +A  +  + +   +E+          AGG   
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEIN--------QAGG--- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV +   V      A    G  D+ +NNAG      P+   T E ++
Sbjct: 52  ------HAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVD 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G I   + A+   + +  GG I N   + +G    P  AVY S+K  +R L 
Sbjct: 105 KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINA-CSQAGHVGNPELAVYSSSKFAVRGLT 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +  ++     + V+   PG+V T +
Sbjct: 164 QTAARDLAPLGITVNGYCPGIVKTPM 189

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  133 bits (337), Expect = 4e-37
 Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 19/186 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG + G+GK +A  F   G RVV+  R+ E +     E+E           G   
Sbjct: 7   KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIE--------QFPG--- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 ++  +  DV    D+QK+      +FG IDI INNA  N    P    +     
Sbjct: 56  ------QILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWN 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +++  L G+  C++   +   ++   G+I NM  A     + P      + K G+  + 
Sbjct: 109 SVINIVLNGTFYCSQAIGKYWIEKGIKGNIINM-VATYAWDAGPGVIHSAAAKAGVLAMT 167

Query: 214 ASLFKE 219
            +L  E
Sbjct: 168 KTLAVE 173

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  133 bits (337), Expect = 5e-37
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 20/221 (9%)

Query: 20  GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 79
           G++M +E+      R  ++TG  + +G A       +G RV++A          V +L  
Sbjct: 1   GSHMYMEKLRLDN-RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR- 58

Query: 80  NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 139
                    G           V+ +  DV     VQ        + G +DI +  AG   
Sbjct: 59  -------MEGH---------DVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICI 102

Query: 140 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPL 198
                   T+ +  + V  NL G     +   R+M +Q K G I  +   +G   +    
Sbjct: 103 SEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAIGSMSGLIVNRPQQ 161

Query: 199 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
            A Y ++K G+ Q   SL  E     +  +  +P  + T L
Sbjct: 162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL 202

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  133 bits (337), Expect = 5e-37
 Identities = 53/235 (22%), Positives = 95/235 (40%), Gaps = 19/235 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITGS+ G+G A+A  F   G  +V+ +R  + +      L+E          G   
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE--------KFG--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  +A DV  P  V  +     + FG  DI +NNAGT    + +++  +E+ +
Sbjct: 57  -----VRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN-ETIMEAADEKWQ 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
                 ++ ++   R  +  MR +  GG I +   +           +Y  TK  L    
Sbjct: 111 FYWELLVMAAVRLARGLVPGMRAR-GGGAIIHN-ASICAVQPLWYEPIYNVTKAALMMFS 168

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 268
            +L  E  +  + V+  +PG++LT   +  +    K          ++VA    P
Sbjct: 169 KTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP 223

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  133 bits (337), Expect = 5e-37
 Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 18/206 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG+T+G+G  +AR F  +G R+V++ R    +      L E         G    
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE-------QFGT--- 70

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V  +A D+ EP    +L+  A   FG +D+ +NNAG +   +P++    +  +
Sbjct: 71  ------DVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFD 123

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             ++ NL    L      + M    +GG I  +  + +  +  P    Y ++K GL    
Sbjct: 124 ATIAVNLRAPALLASAVGKAMVAAGEGGAIITV-ASAAALAPLPDHYAYCTSKAGLVMAT 182

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
             L +E     +  ++  P +VLT++
Sbjct: 183 KVLARELGPHGIRANSVCPTVVLTEM 208

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  133 bits (338), Expect = 6e-37
 Identities = 58/242 (23%), Positives = 107/242 (44%), Gaps = 24/242 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++ G+G A+AR  +  G +VV  +R+          +EE L     +AG    
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVG-------NIEE-LAAECKSAGYP-- 82

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +    CD+    D+  + +   ++   +DI INNAG  +    LL  +    +
Sbjct: 83  -----GTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWK 136

Query: 154 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQ 211
            + + N++   +CTREA + M+++    GHI N++  +G       +T  Y +TK  +  
Sbjct: 137 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 196

Query: 212 LQASLFKESKRSKVGVHTA--SPGMVLTDLLLS---GSTIQNKQMFNIICEL-PETVART 265
           L   L +E + ++  +     SPG+V T            +    +  +  L PE VA  
Sbjct: 197 LTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEA 256

Query: 266 LV 267
           ++
Sbjct: 257 VI 258

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  133 bits (337), Expect = 8e-37
 Identities = 46/234 (19%), Positives = 92/234 (39%), Gaps = 26/234 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+++G+G+ +A      G  VVV +RS E        L++ +    +  G      
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKE-------TLQK-VVSHCLELGA----- 77

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              A    IA  + +    ++    A    G +D+ I N  TN     L       + + 
Sbjct: 78  ---ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKS 133

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  N +  ++ T  A+ +++     G I  +  + +G  + P+ A Y ++K  L    +S
Sbjct: 134 MEVNFLSYVVLTVAALPMLKQ--SNGSIVVV-SSLAGKVAYPMVAAYSASKFALDGFFSS 190

Query: 216 LFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
           + KE    R  V +     G++ T+  +   +              E  A  ++
Sbjct: 191 IRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQA----APKEECALEII 240

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  132 bits (334), Expect = 8e-37
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 22/209 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITG++RG+G+A+AR     G  + + +RS +        LE+ +   +M   G   
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVD-------RLEK-IAHELMQEQG--- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V     DV +   V++ S   +  FG +D+ + NAG    FK L + + EE  
Sbjct: 52  -----VEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFH 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL+G     +  +  ++    G  +             P    Y STK   R L 
Sbjct: 106 EMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDV--SARLIPYGGGYVSTKWAARALV 162

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            +   E+   +       PG V T    S
Sbjct: 163 RTFQIENPDVRFF--ELRPGAVDTYFGGS 189

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  132 bits (335), Expect = 1e-36
 Identities = 47/237 (19%), Positives = 89/237 (37%), Gaps = 22/237 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+   +G A A      G  + +   + E++      +           G      
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR--------EKGV----- 56

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +     CDV     V    +  V +FG ID   NNAG    F P+  + +++  ++
Sbjct: 57  ----EARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARV 112

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++ N+ G+    +   R M  Q   G I N    AG  G   P  A YG++K  +  L  
Sbjct: 113 LTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALTE 169

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPETVARTLVPRI 270
           +   +     + V+  SPG +    +         ++ +      P+ VA+ ++  +
Sbjct: 170 TAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 226

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  132 bits (335), Expect = 1e-36
 Identities = 48/207 (23%), Positives = 93/207 (44%), Gaps = 21/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG ++G+G A+  E    G RV   SR+ + +   +              G    
Sbjct: 22  TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR--------EKGL--- 70

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  V G  CD+    +  KL     + F G ++I +NNAG     K    FT ++ 
Sbjct: 71  ------NVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDY 123

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
             I+ TN   +   ++ A  +++   + G++  +  + +G S+ P  ++Y ++K  + Q+
Sbjct: 124 NIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFL-SSIAGFSALPSVSLYSASKGAINQM 181

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             SL  E  +  + V++ +PG++LT L
Sbjct: 182 TKSLACEWAKDNIRVNSVAPGVILTPL 208

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  132 bits (334), Expect = 1e-36
 Identities = 50/222 (22%), Positives = 88/222 (39%), Gaps = 25/222 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV---ASRSSESVRMTVTELEENLKEGMMAAGG 90
           + +VI G  + LG   A+ F L    +V+    ++ S++      ELE          G 
Sbjct: 12  KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE--------DQGA 63

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
                    KVA    D+    +V KL +FA  EFG +DI IN  G     KP+++ +  
Sbjct: 64  ---------KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEA 113

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
           E + + + N   +    ++A + M      GHI  +       + T   + Y   K  + 
Sbjct: 114 EFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITI-ATSLLAAYTGFYSTYAGNKAPVE 169

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
               +  KE  + ++ V+  +PG + T       T ++    
Sbjct: 170 HYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFH 211

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  131 bits (332), Expect = 3e-36
 Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 25/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG +RG+G  +  E    G  V   SR+ + +   +T+          + G    
Sbjct: 10  CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWR--------SKGF--- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                 KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+ 
Sbjct: 59  ------KVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDY 111

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 210
             I+S N   +   +  A   ++   + G++  +    S  G  + P  AVYG+TK  + 
Sbjct: 112 SLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFI---SSVSGALAVPYEAVYGATKGAMD 167

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
           QL   L  E  +  + V+   PG++ T L
Sbjct: 168 QLTRCLAFEWAKDNIRVNGVGPGVIATSL 196

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  131 bits (331), Expect = 5e-36
 Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 23/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+GK +A  +  +G +V VA+R S+++++   E+           GG   
Sbjct: 33  KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIA--------GVGG--- 81

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   I CDV +P  V+ + +    E G IDI + NAG     + +L    EE +
Sbjct: 82  ------KALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV-QAMLDMPLEEFQ 134

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGLR 210
           +I  TN+ G  L  + A R M DQ  GG I     M  +G   +     + Y ++K  + 
Sbjct: 135 RIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM--SGHIINIPQQVSHYCTSKAAVV 192

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
            L  ++  E    ++ V++ SPG + T+L
Sbjct: 193 HLTKAMAVELAPHQIRVNSVSPGYIRTEL 221

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  130 bits (329), Expect = 7e-36
 Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 92
           +  ++TGS+RG+GKA A     +G  +V+  +RS ++   T  E+E          G   
Sbjct: 5   KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIE--------KLGV-- 54

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  KV  +  +V +PA ++++       FG +D+++NNA +    +P+++      
Sbjct: 55  -------KVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHW 106

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +  ++ N    + C +EA ++M     GGHI ++  +             G +K  L  L
Sbjct: 107 DWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSI-SSLGSIRYLENYTTVGVSKAALEAL 164

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
              L  E    ++ V+  S G + TD 
Sbjct: 165 TRYLAVELSPKQIIVNAVSGGAIDTDA 191

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  131 bits (332), Expect = 7e-36
 Identities = 47/206 (22%), Positives = 77/206 (37%), Gaps = 18/206 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +   ITG   GLGK +       G + V+ASR  + ++ T  ++         +  G   
Sbjct: 27  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQIS--------SQTG--- 75

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV  I CDV +P  VQ   +  +   G  +I INNA  N    P  + +    +
Sbjct: 76  -----NKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWK 129

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I    L G+   T E  + +    KG    ++       + +       S K G+  + 
Sbjct: 130 TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI-TTIYAETGSGFVVPSASAKAGVEAMS 188

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            SL  E  +  +  +   PG + T  
Sbjct: 189 KSLAAEWGKYGMRFNVIQPGPIKTKG 214

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  130 bits (329), Expect = 8e-36
 Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 20/206 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSS 92
           + VVITGS+ GLGK++A  F     +VVV  RS  +     + E++          GG  
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK--------KVGG-- 57

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  + 
Sbjct: 58  -------EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDW 109

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            +++ TNL G+ L +REA++   +    G + NM  +       PL   Y ++K G++ +
Sbjct: 110 NKVIDTNLTGAFLGSREAIKYFVENDIKGTVINM-SSVHEKIPWPLFVHYAASKGGMKLM 168

Query: 213 QASLFKESKRSKVGVHTASPGMVLTD 238
             +L  E     + V+   PG + T 
Sbjct: 169 TETLALEYAPKGIRVNNIGPGAINTP 194

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  131 bits (331), Expect = 1e-35
 Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 19/207 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  V+TG   G+G A A EF   G R+V++     ++   V  L           G    
Sbjct: 32  RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLR--------GQGF--- 80

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                    G+ CDV    ++ +L++ A    G +D+  +NAG      PL Q  +++  
Sbjct: 81  ------DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA-GPLAQMNHDDWR 133

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  +L GSI      +  + +Q  GGHI        G         YG  K G+  L 
Sbjct: 134 WVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFA-GLVPNAGLGTYGVAKYGVVGLA 192

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L +E K + +GV    P +V T L+
Sbjct: 193 ETLAREVKPNGIGVSVLCPMVVETKLV 219

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  128 bits (325), Expect = 3e-35
 Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 29/239 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + ++ITG++ G+G+ +ARE  ++G ++++ +R           +E  +   +  AGG   
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQA-------RIEA-IATEIRDAGG--- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                        DV +   V   +  AV+ +G ID+ +NNAG      PL     +E E
Sbjct: 54  ------TALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGV-MPLSPLAAVKVDEWE 106

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
           +++  N+ G +      + +M  Q + G I N+   GS    S  P  AVY +TK  +R 
Sbjct: 107 RMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINI---GSIGALSVVPTAAVYCATKFAVRA 162

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLS---GSTIQNKQMFNIICELPETVARTLV 267
           +   L +ES   +V     +PG+V ++L  +     T+     +  I   P  +AR + 
Sbjct: 163 ISDGLRQESTNIRVT--CVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVR 219

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  128 bits (324), Expect = 4e-35
 Identities = 39/235 (16%), Positives = 77/235 (32%), Gaps = 18/235 (7%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              V+TG + G+G A     L +G  V   +R  E +R   + L +         G    
Sbjct: 9   AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR------FPGA--- 59

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 ++    CDV +   V+  +       G   I +NNAG  +      + T+E   
Sbjct: 60  ------RLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWS 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           + +       I   R  +  +  +     I  +  +       P      + + G++ L 
Sbjct: 113 EELQLKFFSVIHPVRAFLPQLESR-ADAAIVCV-NSLLASQPEPHMVATSAARAGVKNLV 170

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 268
            S+  E     V V+    G+V +         + ++  +      +      +P
Sbjct: 171 RSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP 225

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  128 bits (325), Expect = 4e-35
 Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 19/208 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITGS+ G+G+A A  F   G +V +  R +E +  T  ++         AAG S +  
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL--------AAGVSEQN- 59

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEI 152
                V  +  DV   A   ++ +  + +FG +DI +NNAG        K     + E  
Sbjct: 60  -----VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESY 114

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +  ++ NL   I  T++A+  +      G I N+    SG  +TP    Y   K  + Q 
Sbjct: 115 DATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPYYSIAKAAIDQY 172

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             +   +  +  + V++ SPG+V T   
Sbjct: 173 TRNTAIDLIQHGIRVNSISPGLVATGFG 200

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  127 bits (323), Expect = 5e-35
 Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 21/219 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG+  G+GK +A  F  +G  VVV+  ++++    V E++          GG   
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--------QLGG--- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +     CD+    ++  L++FA+++ G +DI +NNAG              +  
Sbjct: 61  ------QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFR 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +    N+      ++     M     GG I  +  + +  +       Y S+K     L 
Sbjct: 113 RAYELNVFSFFHLSQLVAPEMEKN-GGGVILTI-TSMAAENKNINMTSYASSKAAASHLV 170

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
            ++  +     + V+  +PG +LTD L S  T + +Q  
Sbjct: 171 RNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM 209

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  128 bits (324), Expect = 5e-35
 Identities = 51/239 (21%), Positives = 84/239 (35%), Gaps = 29/239 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG+  G+G+  A EF     ++V+   +   +  T  + +                 
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--------------- 78

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              AKV     D     D+   +     E G + I +NNAG       L    + +IE+ 
Sbjct: 79  --GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT-SDLFATQDPQIEKT 135

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              N++     T+  +  M      GHI  +  + +G  S P    Y S+K        +
Sbjct: 136 FEVNVLAHFWTTKAFLPAMTKN-NHGHIVTV-ASAAGHVSVPFLLAYCSSKFAAVGFHKT 193

Query: 216 LFKE---SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
           L  E    + + V      P  V T  + + ST     +       PE V   L+  I 
Sbjct: 194 LTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL------EPEEVVNRLMHGIL 246

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  128 bits (323), Expect = 6e-35
 Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA--SRSSESVRMTVTELEENLKEGMMAAGGS 91
           +  ++TG  +G+G+ ++ +    G  + VA   +  E    T+  +E        AA   
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIE--------AADQ- 53

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                   K   +  DV + A+     + A  + G  D+ +NNAG  +  KPLL+ T E+
Sbjct: 54  --------KAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEED 104

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
           ++QI S N+       + A R   +    G I N   + +     P+ + Y +TK  +R 
Sbjct: 105 LKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINA-ASIAAIQGFPILSAYSTTKFAVRG 163

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L  +  +E       V+  +PG+V T +
Sbjct: 164 LTQAAAQELAPKGHTVNAYAPGIVGTGM 191

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  128 bits (324), Expect = 6e-35
 Identities = 50/205 (24%), Positives = 76/205 (37%), Gaps = 19/205 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +   ITG   G+G  +A  F+  G   V+ASRS   V     +L         A G    
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-------ATGR--- 77

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   ++ DV  P  V    + A+ EFG IDI IN A  N    P    +    +
Sbjct: 78  ------RCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFK 130

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  +  G+   +R           GG I N+  A  G     L    GS K  +  + 
Sbjct: 131 TVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNI-TATLGNRGQALQVHAGSAKAAVDAMT 188

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
             L  E     + V++ +PG +   
Sbjct: 189 RHLAVEWGPQNIRVNSLAPGPISGT 213

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  126 bits (320), Expect = 1e-34
 Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 19/205 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+  G+G+A+A++F L+   VV      + +   V EL           G      
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR--------GMGK----- 56

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +V G+  DV +  DV++        +  ID+  NNAG   G  P+ + ++E  E++
Sbjct: 57  ----EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERV 112

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ NL  +   +R  + +M  Q   G I N   + +G       A Y   K GL  L  S
Sbjct: 113 LAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNT-ASIAGIRGGFAGAPYTVAKHGLIGLTRS 170

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           +        +      PG V T++ 
Sbjct: 171 IAAHYGDQGIRAVAVLPGTVKTNIG 195

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  127 bits (321), Expect = 1e-34
 Identities = 50/207 (24%), Positives = 80/207 (38%), Gaps = 24/207 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG ++G+G A+AR    +G  V +A     + +  V  LE               
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--------------- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV + A V      A++  G  D+   NAG +   +P +  T+EE +
Sbjct: 58  -----NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWD 111

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 212
                N  G  L  + A R        G I N    A   G+  PL A Y ++K  +   
Sbjct: 112 FNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA--PLLAHYSASKFAVFGW 169

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L +E     + V+   PG V T +
Sbjct: 170 TQALAREMAPKNIRVNCVCPGFVKTAM 196

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  127 bits (321), Expect = 2e-34
 Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 25/205 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            VITG+T G+G A A+ F+  G RV +  R  + +   + E+           GG     
Sbjct: 32  AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----------GG----- 75

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                  GI  D    A++ +L      E G ID+   NAG      PL + T E+ +  
Sbjct: 76  ----GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDT 130

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
              N+ G +   ++A+ ++     G  +    G+ +G + TP  +VY ++K  LR    +
Sbjct: 131 FDRNVKGVLFTVQKALPLLAR---GSSVVLT-GSTAGSTGTPAFSVYAASKAALRSFARN 186

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
              + K   + ++T SPG   T  L
Sbjct: 187 WILDLKDRGIRINTLSPGPTETTGL 211

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  126 bits (320), Expect = 2e-34
 Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 25/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG T+G+G A+  EF   G  +   +R+   +   +++ +          G    
Sbjct: 15  KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQ--------KKGF--- 63

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEI 152
                 +V G  CD     + +KL     + FG  +DI INN G  +  KP L +T E+ 
Sbjct: 64  ------QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDF 116

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 210
              +STNL  +   ++ A  +++     G+I  M    S  G  S  + ++Y +TK  L 
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFM---SSIAGVVSASVGSIYSATKGALN 172

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
           QL  +L  E     +  +  +P ++ T L
Sbjct: 173 QLARNLACEWASDGIRANAVAPAVIATPL 201

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  127 bits (321), Expect = 2e-34
 Identities = 47/206 (22%), Positives = 83/206 (40%), Gaps = 19/206 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG+  G+G+A A      G  V    R+   V     E+          AGG     
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV--------GAGG----- 77

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV +   ++      V +FG +DI + NAG N  + P+      E ++ 
Sbjct: 78  ----QAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDET 133

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++ NL G+ L     +  ++ +  GG I  +    G+   +TP    Y +TK     +  
Sbjct: 134 IAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQ 192

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
            L  E  +  + V+   PG + T++ 
Sbjct: 193 QLALELGKHHIRVNAVCPGAIETNIS 218

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  125 bits (317), Expect = 3e-34
 Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 28/210 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG T G+G A+A +F+  G +V++  R S+        +                  
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV---------GTPD----- 54

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               ++     D  +     KL +     FG +   +NNAG     K + + T  E  ++
Sbjct: 55  ----QIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKL 109

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ NL G    TR  ++ M+++  G  I NM  +  G    P    Y ++K  +R +  S
Sbjct: 110 LAVNLDGVFFGTRLGIQRMKNKGLGASIINM-SSIEGFVGDPSLGAYNASKGAVRIMSKS 168

Query: 216 LFKESKRSKVG-----VHTASPGMVLTDLL 240
              +            VH   PG + T L+
Sbjct: 169 AALDCALKDYDVRVNTVH---PGYIKTPLV 195

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  125 bits (317), Expect = 4e-34
 Identities = 46/245 (18%), Positives = 88/245 (35%), Gaps = 39/245 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +NV+   +  G+G   +RE +    +  V     E+          N K           
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPK----------- 54

Query: 94  KNLVHAKVAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +     DV  P A+ +KL     ++  ++DI IN AG            + +I
Sbjct: 55  -----VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQI 100

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGS--GGSSTPLTAVYGSTKCG 208
           E+ ++ N  G +  T   +     +    GG I N+    S  G ++     VY ++K  
Sbjct: 101 ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANI---CSVTGFNAIHQVPVYSASKAA 157

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLL--LSGSTIQNKQMFNIICEL----PETV 262
           +     SL K +  + V  ++ +PG+  T L+   +       ++  ++        E  
Sbjct: 158 VVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQC 217

Query: 263 ARTLV 267
            +  V
Sbjct: 218 GQNFV 222

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  126 bits (319), Expect = 4e-34
 Identities = 48/206 (23%), Positives = 81/206 (39%), Gaps = 17/206 (8%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITGS+ G+G++ A  F   G +V +  R+ + +  T  ++          AG  ++K 
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--------KAGVPAEKI 80

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 154
                   +  DV E +    + N  + +FG IDI +NNAG              E  ++
Sbjct: 81  NA------VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQK 134

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
               N    I  T++    +      G I N+    +G  +      Y   K  L Q   
Sbjct: 135 TFKLNFQAVIEMTQKTKEHLIKT--KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTR 192

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
               +  +  V V++ SPG V T  +
Sbjct: 193 CTAIDLIQHGVRVNSVSPGAVATGFM 218

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  125 bits (317), Expect = 4e-34
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 25/207 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++ G T G+G A  R  +  G  V++  R+  ++     E            G    
Sbjct: 9   KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----------GP--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  +  D+ +  ++  L   A    G+ID+   NAG ++  +P  Q +    +
Sbjct: 55  ------RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYD 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +  + N  G+    +    ++R+   GG I     + +     P  +VY ++K  L    
Sbjct: 108 RQFAVNTKGAFFTVQRLTPLIRE---GGSIVFT-SSVADEGGHPGMSVYSASKAALVSFA 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
           + L  E     + V++ SPG + T   
Sbjct: 164 SVLAAELLPRGIRVNSVSPGFIDTPTK 190

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  126 bits (318), Expect = 4e-34
 Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 23/210 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             + ITG+T G G+A AR F  +G  +V+  R  E ++    EL                
Sbjct: 22  STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK------------- 68

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  +  DV + A +    +    EF ++   INNAG   G  P      ++ +
Sbjct: 69  -----TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWD 123

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
            +V TN+ G +  TR  +  +     G  I N+   GS  G    P + VYG TK  + Q
Sbjct: 124 TMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNL---GSVAGKWPYPGSHVYGGTKAFVEQ 180

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLL 241
              +L  + + + V V    PG+  ++  L
Sbjct: 181 FSLNLRCDLQGTGVRVTNLEPGLCESEFSL 210

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  126 bits (318), Expect = 4e-34
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 18/205 (8%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++ G+G+A A  F   G +VVV +R+  ++     E+           GG     
Sbjct: 11  AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIA--------GGGG----- 57

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               + A +A DV + A  + L   AV  FG +D   NNAG       +   + E   + 
Sbjct: 58  ----EAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRET 113

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           + TNL  + L  +  +  +     GG +          +     A Y ++K GL  L  +
Sbjct: 114 LDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQA 172

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L  E     + V+   PG   T   
Sbjct: 173 LAVELGARGIRVNALLPGGTDTPAN 197

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  124 bits (314), Expect = 6e-34
 Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 28/208 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V+ITG++RG+G+A AR     G RV + +R  + ++    ELE               
Sbjct: 6   GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-------------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV E  D  +        FG +   +NNAG     KP+ + T EE  
Sbjct: 52  -------ALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWR 103

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
            ++ TNL G+ L  R A+  +  +  GG I N+   GS  G +     A Y ++K GL  
Sbjct: 104 LVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNV---GSLAGKNPFKGGAAYNASKFGLLG 159

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L  +   + + + V V    PG V T  
Sbjct: 160 LAGAAMLDLREANVRVVNVLPGSVDTGF 187

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  124 bits (313), Expect = 1e-33
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 27/206 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG+ +G+G+   +    SG +VV  +R++        +L    KE          
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS-------DLVSLAKEC--------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  +  D+ +    +K    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 52  -----PGIEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALVI-MQPFLEVTKEAFD 101

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +  S NL      ++   R M ++   G I N+  +     + P    Y STK  +  L 
Sbjct: 102 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNV-SSMVAHVTFPNLITYSSTKGAMTMLT 160

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            ++  E    K+ V++ +P +VLTD+
Sbjct: 161 KAMAMELGPHKIRVNSVNPTVVLTDM 186

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  124 bits (314), Expect = 1e-33
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 19/206 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG   GLG+A A      G ++ +   SSE +  +   + E        A       
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-------TAPD----- 63

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              A+V     DV + A V+         FG ID + NNAG      P   FT  E +++
Sbjct: 64  ---AEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKV 120

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           VS NL G  L   + +++MR+Q   G + N     G  G      + Y + K G+  L  
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIRGI--GNQSGYAAAKHGVVGLTR 177

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
           +   E  R  + ++  +PG + T ++
Sbjct: 178 NSAVEYGRYGIRINAIAPGAIWTPMV 203

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  123 bits (312), Expect = 1e-33
 Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 31/208 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++TG+ +G+G+   +    +G RVV  SR+         +L+  ++E          
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA-------DLDSLVREC--------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  +  D+ +    ++    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 52  -----PGIEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFD 101

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
           +    NL   I  ++   R +  +   G I N+    S     +    +VY STK  L  
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNV---SSQCSQRAVTNHSVYCSTKGALDM 158

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDL 239
           L   +  E    K+ V+  +P +V+T +
Sbjct: 159 LTKVMALELGPHKIRVNAVNPTVVMTSM 186

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  124 bits (314), Expect = 2e-33
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITGST G+G A+AR    +G  +V+    +        +    + + +        
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAP-------DEIRTVTDEVAGLSS--- 75

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V     D+ +P+++  +     + FG  DI +NNAG     + +  F  E+ +
Sbjct: 76  -----GTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWD 129

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 212
           +I++ NL  S    R A+  M+ +   G I N+    G   S  P  + Y + K G+  L
Sbjct: 130 RIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGLVAS--PFKSAYVAAKHGIMGL 186

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             ++  E   S V V++  PG VLT L
Sbjct: 187 TKTVALEVAESGVTVNSICPGYVLTPL 213

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  123 bits (312), Expect = 2e-33
 Identities = 50/207 (24%), Positives = 86/207 (41%), Gaps = 21/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG+  G+G+A+A  F  +G  VVV    SE        +          AGG   
Sbjct: 13  AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIR--------QAGG--- 61

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K  G+ C+V +    + +   A+++FG I + +NNAG              + E
Sbjct: 62  ------KAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGP--KPFDMPMSDFE 113

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
                NL      ++ A   M+    GG I N+  + +G ++    A YGS+K  +  L 
Sbjct: 114 WAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNI-SSMAGENTNVRMASYGSSKAAVNHLT 171

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            ++  +     + V+  +PG + TD L
Sbjct: 172 RNIAFDVGPMGIRVNAIAPGAIKTDAL 198

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  123 bits (312), Expect = 3e-33
 Identities = 58/213 (27%), Positives = 95/213 (44%), Gaps = 20/213 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
           V++TG +RG+G A+ R     G RV V  + + E+    V  +          +GG    
Sbjct: 29  VLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT--------ESGG---- 76

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                +   I  DV   AD+  + +    +FG +D  +NNAG     + + + + E IE+
Sbjct: 77  -----EAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIER 131

Query: 155 IVSTNLVGSILCTREAMRVMRDQ--PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++  N+ GSILC  EA+R M      +GG I N+    +   S      Y ++K  +   
Sbjct: 132 MLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTF 191

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
              L +E     + V+   PG++ TDL  SG  
Sbjct: 192 TIGLAREVAAEGIRVNAVRPGIIETDLHASGGL 224

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  122 bits (309), Expect = 5e-33
 Identities = 53/207 (25%), Positives = 82/207 (39%), Gaps = 20/207 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TGST G+G  +A      G  +V+                E ++ G+ A  G   
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHG--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV     D+ +   V+ L + AV + G IDI +NNAG       +  F  E+ +
Sbjct: 55  -----VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWD 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GSGGSSTPLTAVYGSTKCGLRQL 212
            I++ NL      T  A+  M+ Q   G I N+  A G   S     + Y + K G+   
Sbjct: 109 AILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASAHGLVAS--ANKSAYVAAKHGVVGF 165

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
                 E+    +  +   PG V T L
Sbjct: 166 TKVTALETAGQGITANAICPGWVRTPL 192

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  124 bits (312), Expect = 6e-33
 Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 22/215 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R   +TG   G+G  L R+ L  G +V +A    +S+   +  LE           G   
Sbjct: 9   RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEA-------EGSG--- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V G+  DV      +  ++     FG + I  NNAG N   +P+ + + ++ +
Sbjct: 59  -----PEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF-QPIEESSYDDWD 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            ++  NL G +      +  M ++      KGGH+ N         +     +Y +TK  
Sbjct: 113 WLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA-AFLAAGSPGIYNTTKFA 171

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG 243
           +R L  SL     + ++GV    PG+V + +  S 
Sbjct: 172 VRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  122 bits (308), Expect = 6e-33
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 17/207 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R +++TG+ RG+G A AR +   G  VV+  R+  S+     +++        +AG    
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIK--------SAGQPQ- 65

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  +  +       ++L+    +EFG +D  ++NA       PL Q  +E+  
Sbjct: 66  -----PLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFM 120

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           Q++  N+  + + TR  + +++        F     G  G        YG +K     L 
Sbjct: 121 QVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR--ANWGAYGVSKFATEGLM 178

Query: 214 ASLFKE-SKRSKVGVHTASPGMVLTDL 239
            +L  E    + V  ++ +PG   T +
Sbjct: 179 QTLADELEGVTAVRANSINPGATRTGM 205

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  122 bits (308), Expect = 6e-33
 Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 32/224 (14%)

Query: 20  GANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE 79
             +M  E       +  ++TGS  G+G+A A      G  VVVA  ++E+      ++  
Sbjct: 2   PGSMRFEN------KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV- 54

Query: 80  NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 139
                  A GG             +A DV +P   + +++  + EFG ID  +NNA    
Sbjct: 55  -------ADGG---------TAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFG 98

Query: 140 GFK--PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSST 196
           G K   LL    E  ++ +S NL G++ CTR   + M  +  GG I N    A    S  
Sbjct: 99  GMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVNQSSTAAWLYS-- 155

Query: 197 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
                YG  K G+  L   L +E     + ++  +PG + T+  
Sbjct: 156 ---NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEAN 196

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  122 bits (309), Expect = 7e-33
 Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 19/208 (9%)

Query: 34  RNVVITG-STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           + V++T  +  G+G   AR  LL G  VV++      +  T  +L           G   
Sbjct: 23  KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA--------DLGL-- 72

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +V  + CDV     V  L    V + G +D+ +NNAG      P++  T+EE 
Sbjct: 73  ------GRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEW 125

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +++++  L   +  TR A+R  R    GG I N   +  G  +    + Y + K G+  L
Sbjct: 126 DRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNN-ASVLGWRAQHSQSHYAAAKAGVMAL 184

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
                 E+    V ++  SP +     L
Sbjct: 185 TRCSAIEAVEFGVRINAVSPSIARHKFL 212

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  122 bits (309), Expect = 7e-33
 Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 24/208 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG+  G G+ +A+ F   G +VV+  R          E+           G      
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----------GD----- 55

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +A D+ + ADV      A+++FG +DI +NNAG     +       EE ++I
Sbjct: 56  ----AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRI 111

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGH---IFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           V  N+ G  L T + +   ++    G    I N+  +   G   P  A Y +TK  +  +
Sbjct: 112 VGVNVRGVYLMTSKLIPHFKENGAKGQECVILNV-ASTGAGRPRPNLAWYNATKGWVVSV 170

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             +L  E   +K+ V   +P    T LL
Sbjct: 171 TKALAIELAPAKIRVVALNPVAGETPLL 198

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  123 bits (310), Expect = 7e-33
 Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
           + V+ITG++ G+GKA A E+L + +   ++++A+R  E +      +++           
Sbjct: 34  KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNA------ 87

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
                    KV     D+ +   ++        EF  IDI +NNAG   G   + Q   E
Sbjct: 88  ---------KVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATE 138

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCG 208
           +I+ +  TN+   I  T+  + + + +   G I N+   GS  G  + P  ++Y ++K  
Sbjct: 139 DIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVNL---GSIAGRDAYPTGSIYCASKFA 194

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLL 241
           +     SL KE   +K+ V   +PG+V T+  L
Sbjct: 195 VGAFTDSLRKELINTKIRVILIAPGLVETEFSL 227

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  122 bits (308), Expect = 9e-33
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGS RGLG A A     +G RV++    +  +  +V  L           G    
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT--------RKGY--- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                    G+A DV +   ++   +    E   +DI INNAG     KP+++   E  +
Sbjct: 59  ------DAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR-KPMVELELENWQ 111

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-----GGSSTPLTAVYGSTKCG 208
           +++ TNL  + L +R A + M  +  GG I N+   GS          P  A Y + K G
Sbjct: 112 KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINI---GSLTSQAAR---PTVAPYTAAKGG 165

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           ++ L  S+  E  +  +  +   PG +LTD+
Sbjct: 166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  124 bits (313), Expect = 9e-33
 Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 14/205 (6%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V ITG++RG+GKA+A +    G  +V+A+++++     +  +    +E + A GG   
Sbjct: 46  CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEE-IEAVGG--- 101

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K      DV +   +      A+ +FG IDI +NNA         L    + ++
Sbjct: 102 ------KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLD 154

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQL 212
            +++ N  G+ L ++  +  ++   K  HI N+                Y   K G+   
Sbjct: 155 LMMNVNTRGTYLASKACIPYLKKS-KVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMY 213

Query: 213 QASLFKESKRSKVGVHTASPGMVLT 237
              + +E K  ++ V+   P   + 
Sbjct: 214 VLGMAEEFK-GEIAVNALWPKTAIH 237

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  121 bits (307), Expect = 1e-32
 Identities = 48/212 (22%), Positives = 75/212 (35%), Gaps = 23/212 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++TG  RG+G A  R    +G  V V  RS+        ++ +         G    
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGK-------EFGV--- 64

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K     CDV     V K       + G I   I NAG +   KP  + T+E+  
Sbjct: 65  ------KTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV-KPATELTHEDFA 117

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM------DGAGSGGSSTPLTAVYGSTKC 207
            +   N+ G     R   ++   + + G I             S  + +     Y S+K 
Sbjct: 118 FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKA 177

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
               L   L  E   + + V+  SPG V TD 
Sbjct: 178 ACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  121 bits (306), Expect = 1e-32
 Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 24/221 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 92
           R +V+ G+ R +G+A A  F   G  VV+  + ++E     V E+E          G   
Sbjct: 9   RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE--------KLGR-- 58

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                      I  D+   A+V+   + A ++FG I   ++ AG     K + +      
Sbjct: 59  -------SALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFW 111

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQ 211
            Q++  NL    L  + A+  M    KGG I      AG  G   P    Y ++K  +  
Sbjct: 112 HQVLDVNLTSLFLTAKTALPKMA---KGGAIVTFSSQAGRDGGG-PGALAYATSKGAVMT 167

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
               L KE    K+ V+   PGM+ T    + +  + ++  
Sbjct: 168 FTRGLAKEVG-PKIRVNAVCPGMISTTFHDTFTKPEVRERV 207

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  121 bits (305), Expect = 1e-32
 Identities = 25/209 (11%), Positives = 58/209 (27%), Gaps = 35/209 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +N+++ G +  LG  + + F       +                                
Sbjct: 23  KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP------------------------ 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                              +++ +     ++   +D ++  AG   G         + ++
Sbjct: 59  -----NADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK 113

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  NL  +        +++    +GG      GA +  + T     YG+TK     + 
Sbjct: 114 GMIDMNLYSAFASAHIGAKLLN---QGGLFVLT-GASAALNRTSGMIAYGATKAATHHII 169

Query: 214 ASLFKESKRSKVG--VHTASPGMVLTDLL 240
             L  E+     G       P  + T   
Sbjct: 170 KDLASENGGLPAGSTSLGILPVTLDTPTN 198

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  121 bits (306), Expect = 2e-32
 Identities = 56/210 (26%), Positives = 84/210 (40%), Gaps = 31/210 (14%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+ +G+G+A A   LL G +V +   + E+       L E  +             
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ----------- 58

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               K   I CDV +   ++      V+ FG +DI +NNAG N           +  E+ 
Sbjct: 59  ----KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKT 105

Query: 156 VSTNLVGSILCTREAMRVMRDQPKG--GHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 212
           +  NLV  I  T   +  M  Q  G  G I NM   AG          VY ++K G+   
Sbjct: 106 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--AQQPVYCASKHGIVGF 163

Query: 213 --QASLFKESKRSKVGVHTASPGMVLTDLL 240
              A+L      S V ++   PG V T +L
Sbjct: 164 TRSAALAANLMNSGVRLNAICPGFVNTAIL 193

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  121 bits (306), Expect = 2e-32
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 92
           +  ++TG++RG+G A+A      G  VV+  +  + +      ++E        AAGG  
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE--------AAGG-- 77

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  K      DV +PA V++L   A   FG +D+ +NNAG       + +  +   
Sbjct: 78  -------KALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVF 129

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +++++ NL G+    REA + +R    GG I NM      G   P   +Y + K G+  +
Sbjct: 130 DRVIAVNLKGTFNTLREAAQRLRV---GGRIINM-STSQVGLLHPSYGIYAAAKAGVEAM 185

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
              L KE +   + V+  +PG   TDL L G + + +  F
Sbjct: 186 THVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRF 225

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  121 bits (307), Expect = 2e-32
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 23/205 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+  G+G A+AR     G  V+ A    ++     T++           G      
Sbjct: 32  AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----------GC----- 75

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                 A    DV +   +  + +  V  FG +D  + NAG       L+  T E+ +++
Sbjct: 76  ----GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVV-HLASLIDTTVEDFDRV 130

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ NL G+ LCT+ A   M ++  GG I N+  + +G  +   T  YG +K G+ QL   
Sbjct: 131 IAINLRGAWLCTKHAAPRMIER-GGGAIVNL-SSLAGQVAVGGTGAYGMSKAGIIQLSRI 188

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
              E + S +  +T  P  V T + 
Sbjct: 189 TAAELRSSGIRSNTLLPAFVDTPMQ 213

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  120 bits (304), Expect = 3e-32
 Identities = 57/209 (27%), Positives = 88/209 (42%), Gaps = 25/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+G+A AR     G  V +A+R  E       +L   L + + AAG    
Sbjct: 8   KVALITGASSGIGEATARALAAEGAAVAIAARRVE-------KLRA-LGDELTAAGA--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV  +  DV +   V       V   G +DI +NNAG      P+      +  
Sbjct: 57  ------KVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGI-MLLGPVEDADTTDWT 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
           +++ TNL+G +  TR A+  +      G +  M    S  G  +    AVY +TK G+  
Sbjct: 110 RMIDTNLLGLMYMTRAALPHLLRS--KGTVVQM---SSIAGRVNVRNAAVYQATKFGVNA 164

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLL 240
              +L +E     V V    PG   T+L 
Sbjct: 165 FSETLRQEVTERGVRVVVIEPGTTDTELR 193

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  120 bits (303), Expect = 3e-32
 Identities = 44/232 (18%), Positives = 83/232 (35%), Gaps = 28/232 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TG+T G+G  + ++ L     V    R+ E        L   L E          
Sbjct: 6   KIAVVTGATGGMGIEIVKD-LSRDHIVYALGRNPE-------HLAA-LAEI--------- 47

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V  I  D+ +    +   +  +     +D  ++ A   +    +   +  E  
Sbjct: 48  -----EGVEPIESDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARD-TTIEAGSVAEWH 100

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             +  N++     +R+ +  +R     G +  +  +G+G    P   +Y ++K  LR L 
Sbjct: 101 AHLDLNVIVPAELSRQLLPALRA--ASGCVIYI-NSGAGNGPHPGNTIYAASKHALRGLA 157

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART 265
            +  KE   + + V T SPG   T +L      Q       I   P+ +A  
Sbjct: 158 DAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANA 209

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  121 bits (305), Expect = 3e-32
 Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGST G+GKA+A   +  G  V++  R  E+V  T+ E+         A      
Sbjct: 11  KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIR--------AQYPD-- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A +  +  D+      Q +    + ++  +DI INN G  +         +E+  
Sbjct: 61  -----AILQPVVADLGTEQGCQDV----IEKYPKVDILINNLGIFEP-VEYFDIPDEDWF 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++   N++  +  TR  ++ M ++ K G +  +  + +    +   A Y +TK     L 
Sbjct: 111 KLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFI-ASEAAIMPSQEMAHYSATKTMQLSLS 168

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            SL + +  + V V+T  PG  LT+ 
Sbjct: 169 RSLAELTTGTNVTVNTIMPGSTLTEG 194

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  120 bits (304), Expect = 3e-32
 Identities = 52/251 (20%), Positives = 93/251 (37%), Gaps = 38/251 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TG++RG+G+ +A +   +G  V +  R  +++R+   E +        + GG   
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ--------SLGG--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNE-FGSIDIWINNAG------TNKGFKPLLQ 146
                 +   + CD  + ++V+ L      E  G +D+ +NNA        N   K   +
Sbjct: 55  ------QCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWE 108

Query: 147 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTAVYGST 205
                 + I +  L G   C+    R+M      G I  +                YG  
Sbjct: 109 TPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGLIVVISSPGSLQY---MFNVPYGVG 164

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL---------LSGSTIQNKQMFNIIC 256
           K    +L A    E +R  V   +  PG+V T+LL         L    ++  +      
Sbjct: 165 KAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSA 224

Query: 257 ELPETVARTLV 267
           E  E   + +V
Sbjct: 225 ETTELSGKCVV 235

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  120 bits (303), Expect = 4e-32
 Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++ G G A+A  FL  GDRV     S+E++  T             A        
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH-------AYAD----- 52

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--TNKGFKPLLQFTNEEIE 153
               KV  +  DV +  DV       + +FG+ID+ +NNAG   N     L     E+ +
Sbjct: 53  ----KVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFD 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++++ N+ G  L  R  +  M  Q   G I N+  + +   + P  + Y ++K  + QL 
Sbjct: 109 KVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNI-ASVASLVAFPGRSAYTTSKGAVLQLT 166

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            S+  +   S +  +   PGM+ T + 
Sbjct: 167 KSVAVDYAGSGIRCNAVCPGMIETPMT 193

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  120 bits (304), Expect = 5e-32
 Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 25/210 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +   +TGS+ G+G A+A  +  +G  V +   S  +        +          G    
Sbjct: 35  KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK--------TYGV--- 83

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEI 152
                       C++ +P  V++  +    +FG+ID+++ NAG      P +     +  
Sbjct: 84  ------HSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSW 137

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN---MDGAGSGGSSTPLTAVYGSTKCGL 209
            +I+S +L G   C+    ++ +     G +     +  +G   +   L A Y + K   
Sbjct: 138 NKIISVDLNGVYYCSHNIGKIFKKN-GKGSLIITSSI--SGKIVNIPQLQAPYNTAKAAC 194

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
             L  SL  E       V+T SPG + TD+
Sbjct: 195 THLAKSLAIEW-APFARVNTISPGYIDTDI 223

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  118 bits (299), Expect = 5e-32
 Identities = 46/236 (19%), Positives = 87/236 (36%), Gaps = 41/236 (17%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG+T GLG A AR   L G  ++++ R + ++     E+                  
Sbjct: 3   VLITGATGGLGGAFARA--LKGHDLLLSGRRAGALAELAREV------------------ 42

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  D+ +  + + L    + E G +D+ ++  G   G   + +   + +E++
Sbjct: 43  ----GARALPADLADELEAKAL----LEEAGPLDLLVHAVGKA-GRASVREAGRDLVEEM 93

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           ++ +L+         ++  R Q KG       GA       P  A Y + K  L     +
Sbjct: 94  LAAHLLT----AAFVLKHARFQ-KGARAVFF-GAYPRYVQVPGFAAYAAAKGALEAYLEA 147

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
             KE  R  V +       V T L    + +       +    PE  AR ++  + 
Sbjct: 148 ARKELLREGVHLVLVRLPAVATGLW---APLGGPPKGAL---SPEEAARKVLEGLF 197

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  119 bits (302), Expect = 5e-32
 Identities = 56/207 (27%), Positives = 88/207 (42%), Gaps = 29/207 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + VVITG+++G+G  L R +     RVV  SRS +                  +A     
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP-----------------SADP--- 68

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  +A D+ +P    ++    +  FG ID  +NNAG     KP ++ T E+ +
Sbjct: 69  ------DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYD 121

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 212
             +  N+ G    T+ A   M  Q   GHI ++             +A+   TK GL  +
Sbjct: 122 HNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAV 180

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             SL  E  RS V V+  SPG++ T +
Sbjct: 181 TRSLAMEFSRSGVRVNAVSPGVIKTPM 207

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  120 bits (303), Expect = 6e-32
 Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 21/233 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITGS+ G+G+  A  F   G  V +  RSSE +  T   + +        +G S K+ 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILK--------SGVSEKQ- 59

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNEEI 152
                V  +  DV       ++ N  + +FG ID+ +NNAG    +           +  
Sbjct: 60  -----VNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIY 114

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            + +  NL   I  T++    +      G I N+    +G  + P    Y   K  L Q 
Sbjct: 115 HKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQY 172

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL--LSGSTIQNKQMFNIICELPETVA 263
             S   +  +  + V++ SPGMV T     +      +++ +N +    E + 
Sbjct: 173 TRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIP 225

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  120 bits (303), Expect = 6e-32
 Identities = 52/235 (22%), Positives = 94/235 (40%), Gaps = 24/235 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           + TG+ RG+G+ +A E    G  VVV    SS++    V EL+          G      
Sbjct: 25  LTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELK--------KLGA----- 71

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   I  D+ +P++V  L + AV+ FG +D  ++N+G    +   L+ T E  +++
Sbjct: 72  ----QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKV 126

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            + N  G     ++ ++  R    GG I       +  +  P  A+Y  +K  +     +
Sbjct: 127 FNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRA 183

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 270
              +     V V+  +PG V TD+    S       +  +    E +   L    
Sbjct: 184 FAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGM--PQEKIDEGLANMN 236

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  120 bits (302), Expect = 1e-31
 Identities = 38/205 (18%), Positives = 77/205 (37%), Gaps = 12/205 (5%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + + I+G +RG+G A+A+     G  V + ++S+E        +    KE +  AGG   
Sbjct: 10  KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKE-IEEAGG--- 65

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   I  D+ +   V       V +FG IDI +NNA        + +   +  +
Sbjct: 66  ------QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFD 118

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +    + G+   ++  +  M+ +    HI  +               Y   K G+    
Sbjct: 119 LMNGIQVRGTYAVSQSCIPHMKGR-DNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCA 177

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
             + +E + + +  +T  P   +  
Sbjct: 178 LGIAEELRDAGIASNTLWPRTTVAT 202

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  118 bits (299), Expect = 1e-31
 Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 26/207 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG+T G G+ + R F+  G +V+   R  E ++    EL                  
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----------------- 45

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                +     DV   A ++++      E+ +IDI +NNAG   G +P  + + E+ E +
Sbjct: 46  ---DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM 102

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQ 213
           + TN  G +  TR  +  M ++   GHI N+   GS  G        VYG+TK  +RQ  
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVER-NHGHIINI---GSTAGSWPYAGGNVYGATKAFVRQFS 158

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  +   + V V    PG+V     
Sbjct: 159 LNLRTDLHGTAVRVTDIEPGLVGGTEF 185

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  119 bits (300), Expect = 2e-31
 Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 24/205 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG  RG+G  + R F+ SG RVV+  +     R    EL                  
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG---------------- 55

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   I CDV +  DV+ L +  +  FG +D  +NNAG +   +   + + +   Q+
Sbjct: 56  -----AVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQL 110

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL+G+   T+ A+  +R     G++ N+  +  G         Y +TK  +  +  +
Sbjct: 111 LELNLLGTYTLTKLALPYLRKS--QGNVINI-SSLVGAIGQAQAVPYVATKGAVTAMTKA 167

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L  +     V V+  SPG + T L 
Sbjct: 168 LALDESPYGVRVNCISPGNIWTPLW 192

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  118 bits (299), Expect = 2e-31
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 22/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 92
           +   +TG +RG+G A+A+   L G  V +    ++E  +  V+E+E         AGG  
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--------QAGG-- 81

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +   I  D  +   +++     V   G +DI +N+AG      PL + T  + 
Sbjct: 82  -------RAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH-SAPLEETTVADF 133

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           +++++ N     +  R A R + D   GG I  +    +     P  ++Y ++K  L  L
Sbjct: 134 DEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASKAALAGL 190

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
              L ++     + V+   PG   TD+
Sbjct: 191 TKGLARDLGPRGITVNIVHPGSTDTDM 217

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  118 bits (298), Expect = 2e-31
 Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 25/206 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +++G  RG+G +  R  +  G +VV      E  +    EL                  
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----------AD----- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  DV +PA  +   + AV  FG + + +NNAG       +  +   E ++I
Sbjct: 54  ----AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQRI 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           +  NL G  L  R  ++ M++    G I N+    G  G+       Y +TK  +R L  
Sbjct: 109 LDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLAGT--VACHGYTATKFAVRGLTK 165

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
           S   E   S + V++  PG+V T + 
Sbjct: 166 STALELGPSGIRVNSIHPGLVKTPMT 191

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  118 bits (299), Expect = 2e-31
 Identities = 44/205 (21%), Positives = 78/205 (38%), Gaps = 13/205 (6%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + + ITG++RG+G A+A      G  V +A++S+ +       +       + AAGG   
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAA-VNAAGG--- 62

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   + CD+ E   V+      V+ FG IDI +NNA      +  L    +  +
Sbjct: 63  ------QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFD 115

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 212
            +   N  GS +C +  +  +       HI  +        +       Y   K G+  +
Sbjct: 116 LMQQVNARGSFVCAQACLPHLLQA-PNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLV 174

Query: 213 QASLFKESKRSKVGVHTASPGMVLT 237
              L  E     V ++   P  V+ 
Sbjct: 175 TLGLAAEFGPQGVAINALWPRTVIA 199

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  118 bits (299), Expect = 2e-31
 Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 18/206 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG +RGLG  +A+    +G  VVVASR+ E       +L E         G    
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE-------KYGV--- 71

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +     CDV    +V+KL      +FG +D  +N AG N+   P  +F  +E  
Sbjct: 72  ------ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR-HPAEEFPLDEFR 124

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           Q++  NL G+    REA  ++R+      I N+        + P  + Y ++K G+  L 
Sbjct: 125 QVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGSLTVEEVTMPNISAYAASKGGVASLT 183

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L KE  R  + V+  +PG   T +
Sbjct: 184 KALAKEWGRYGIRVNVIAPGWYRTKM 209

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  118 bits (298), Expect = 3e-31
 Identities = 60/233 (25%), Positives = 98/233 (42%), Gaps = 22/233 (9%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++TGS RG+G A+A      G +VVV  + S++     V+E++        A G      
Sbjct: 22  LVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK--------ALGS----- 68

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   I  D+ +  ++ KL + AV  FG +DI ++N+G    F  L   T EE +++
Sbjct: 69  ----DAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRV 123

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            S N  G     REA R + +   GG I       S   S P  ++Y  +K  +      
Sbjct: 124 FSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRI 180

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 268
             K+    K+ V+  +PG  +TD+    S        +   E  + +A    P
Sbjct: 181 FSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP 233

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  118 bits (298), Expect = 3e-31
 Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 25/220 (11%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            +  ++TG++ G G+A+A   + +GD V+  +R +E     + +L     +         
Sbjct: 5   AKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTE----ALDDLVAAYPDR-------- 52

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEE 151
                      I+ DV +   +  ++   +  +G +D+ +NNAG T  G     + T  E
Sbjct: 53  --------AEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERE 102

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
           +  +   ++ G    TR  +  MR++   G + N+  +  G  S    + Y +TK  L Q
Sbjct: 103 LRDLFELHVFGPARLTRALLPQMRER-GSGSVVNI-SSFGGQLSFAGFSAYSATKAALEQ 160

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM 251
           L   L  E     + V    PG   T+L   G+   +++ 
Sbjct: 161 LSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEEN 200

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  118 bits (297), Expect = 3e-31
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 34/217 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSS 92
           + V+ITGS++G+G A AR F  +G +V +  R + + +  T+  +         A GG  
Sbjct: 8   KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMR--------ADGG-- 57

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                    A  A D+      Q+L +  V +FG ID+ INNAG   G KPL +  +   
Sbjct: 58  -------DAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFY 110

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNM------DGAGSGGSSTPLTAVY 202
           + ++  N+   ++ T+ A+  +        +   + +        G G G        +Y
Sbjct: 111 DAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGA------GLY 164

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           G+ K  L  +  +      +  V  +  SPG V T  
Sbjct: 165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  117 bits (297), Expect = 3e-31
 Identities = 63/206 (30%), Positives = 91/206 (44%), Gaps = 25/206 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG  RGLG   AR+ + +G RVV+A    E    T  EL           G      
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----------GD----- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      DV    D Q++  +A  EFGS+D  +NNAG +     L   + E   ++
Sbjct: 52  ----AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS-TGMFLETESVERFRKV 106

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           V  NL G  +  +  +  M+D   GG I N+   AG  G    LT+ YG++K G+R L  
Sbjct: 107 VEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLMGL--ALTSSYGASKWGVRGLSK 163

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
               E    ++ V++  PGM  T + 
Sbjct: 164 LAAVELGTDRIRVNSVHPGMTYTPMT 189

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  119 bits (301), Expect = 3e-31
 Identities = 60/314 (19%), Positives = 107/314 (34%), Gaps = 36/314 (11%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            + ++ITG++ G G+  A     +G RV  + R       +  E                
Sbjct: 5   KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-------- 56

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                   +  +  DV     V +  +  + E G ID+ I+NAG    F P   FT E+ 
Sbjct: 57  ----NDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHM-VFGPAEAFTPEQF 111

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
            ++   N++ +    R A+  MR Q K G +  +  + S G + P  A Y + K  +  +
Sbjct: 112 AELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAI 170

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV 272
                +E  R  +      PG   +          +     +  +          P   +
Sbjct: 171 AVQYARELSRWGIETSIIVPGAFTSG-------TNHFAHSGVPDDHARQAEYEAGPNAGL 223

Query: 273 VKGSGKAINYLTPP--------RILLALVTAW-----LRRGRWFDDQGRALYAAEADRIR 319
            +   KA   + PP          ++ +V         R      + G  +  +  DR+R
Sbjct: 224 GEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVLDRLR 283

Query: 320 NWAENRARFSFTDA 333
             AE   R   +D 
Sbjct: 284 --AEMLHRVGLSDL 295

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  117 bits (295), Expect = 4e-31
 Identities = 54/253 (21%), Positives = 88/253 (34%), Gaps = 41/253 (16%)

Query: 36  VVITGSTRGLGKALAREF---LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
            V+TG++RG G+ALA +    L  G  ++V++RS   +R    EL     +         
Sbjct: 9   CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL-------- 60

Query: 93  KKNLVHAKVAGIACDVCEPADVQKL----SNFAVNEFGSIDIWINNAGT--NKGFKPLLQ 146
                  KV   A D+   A VQ+L          E     + INNA T  +     L  
Sbjct: 61  -------KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNV 113

Query: 147 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDGAGSGGSSTPLT--AVYG 203
               E+    + NL   +  T   +   +D P     + N+    S  +  P     +Y 
Sbjct: 114 NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNI---SSLCALQPYKGWGLYC 170

Query: 204 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD----LLLSGSTIQNKQMFNIICEL- 258
           + K     L   L  E     V V + +PG +  D       +    + +     +    
Sbjct: 171 AGKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDG 228

Query: 259 ----PETVARTLV 267
                 T A+ L+
Sbjct: 229 ALVDCGTSAQKLL 241

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  117 bits (296), Expect = 5e-31
 Identities = 40/205 (19%), Positives = 83/205 (40%), Gaps = 19/205 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+T  + GLG A A E   +G R+++ SR+ E +    + +        + +G    
Sbjct: 8   KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIAS------LVSGA--- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  +A D+ EP D+ +L      + G  DI + + G  +     ++   E+ +
Sbjct: 59  ------QVDIVAGDIREPGDIDRLFE-KARDLGGADILVYSTGGPRP-GRFMELGVEDWD 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +        ++   R A   M ++   G +  + G+ +        A+    +  +  + 
Sbjct: 111 ESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYI-GSVTLLRPWQDLALSNIMRLPVIGVV 168

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
            +L  E     V V+   P ++LTD
Sbjct: 169 RTLALELAPHGVTVNAVLPSLILTD 193

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  117 bits (296), Expect = 6e-31
 Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 22/204 (10%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           ++TG+ RG+G+ +A E    G +V+V  + S+ES    V  ++          G      
Sbjct: 33  LVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK--------KNGS----- 79

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                 A +  +V    D+ ++   AV  FG +DI  +N+G    F  +   T EE +++
Sbjct: 80  ----DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRV 134

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            + N  G     REA + +     GG +  M        + P  AVY  +K  +      
Sbjct: 135 FTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARC 191

Query: 216 LFKESKRSKVGVHTASPGMVLTDL 239
           +  +    K+ V+  +PG + TD+
Sbjct: 192 MAIDMADKKITVNVVAPGGIKTDM 215

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  116 bits (293), Expect = 6e-31
 Identities = 46/235 (19%), Positives = 86/235 (36%), Gaps = 37/235 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           +VITG++ GLG  LA+ +   G    +  RS   +      L  N               
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNN--------------- 48

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                V   A D+    +V++L              +++AG +  F  L +   E+I+ +
Sbjct: 49  -----VGYRARDLASHQEVEQLFEQL---DSIPSTVVHSAG-SGYFGLLQEQDPEQIQTL 99

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQLQ 213
           +  NL  +I   RE ++  +DQ    ++  +    S          + Y + K  ++ L 
Sbjct: 100 IENNLSSAINVLRELVKRYKDQ--PVNVVMI---MSTAAQQPKAQESTYCAVKWAVKGLI 154

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL-LSGSTIQNKQMFNIICELPETVARTLV 267
            S+  E K   + +    PG + T+    SG ++      +      E  A  + 
Sbjct: 155 ESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLDTSSFMS-----AEDAALMIH 204

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  116 bits (293), Expect = 9e-31
 Identities = 30/206 (14%), Positives = 58/206 (28%), Gaps = 27/206 (13%)

Query: 37  VITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL 96
           ++T +    G A        G  VV    S         +  E  +      G       
Sbjct: 5   LVTHARHFAGPAAVEALTQDGYTVVCHDASFA-------DAAERQRFESENPGT------ 51

Query: 97  VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQ 154
                             ++L +  +    +ID  ++N    +     PL   +  +I Q
Sbjct: 52  ----------IALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQ 101

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           +     +  IL  + A+  +R    G  +  +  +  G        +YG  +     L  
Sbjct: 102 MFEALSIFPILLLQSAIAPLRAA-GGASVIFI-TSSVGKKPLAYNPLYGPARAATVALVE 159

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
           S  K   R  + ++   P        
Sbjct: 160 SAAKTLSRDGILLYAIGPNFFNNPTY 185

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  116 bits (294), Expect = 9e-31
 Identities = 52/209 (24%), Positives = 78/209 (37%), Gaps = 21/209 (10%)

Query: 34  RNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
           + VV+TG+   +G+G   AR     G  V +   S           EEN+KE     G  
Sbjct: 21  KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQ------GAEENVKELEKTYGI- 73

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                   K     C V      +KL    V +FG ID +I NAG       +L  + E 
Sbjct: 74  --------KAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD-SGILDGSVEA 124

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLR 210
              +V  +L G+  C +      +++   G +      +G   +       Y   K G  
Sbjct: 125 WNHVVQVDLNGTFHCAKAVGHHFKER-GTGSLVITASMSGHIANFPQEQTSYNVAKAGCI 183

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDL 239
            +  SL  E  R    V++ SPG + T L
Sbjct: 184 HMARSLANEW-RDFARVNSISPGYIDTGL 211

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  116 bits (293), Expect = 9e-31
 Identities = 44/207 (21%), Positives = 82/207 (39%), Gaps = 23/207 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
               +TG+  G+G  + R F  SG R+++  R + ++     EL                
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA-------------- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A  A I  DV +   +   +         + I +N+AG  +     L+  +    
Sbjct: 58  -----AVAARIVADVTDAEAMTAAAA-EAEAVAPVSILVNSAGIARL-HDALETDDATWR 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 212
           Q+++ N+ G    +R   R M  +   G I N+   +G+  +     + Y ++K  + QL
Sbjct: 111 QVMAVNVDGMFWASRAFGRAMVAR-GAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQL 169

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L  E     V V+  +PG V T++
Sbjct: 170 TRALAAEWAGRGVRVNALAPGYVATEM 196

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  117 bits (295), Expect = 1e-30
 Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 28/209 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG   GLG+AL   F+  G RV V  +S+E +R                 GG     
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----------GG----- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI--- 152
                  G+  DV    D ++ +   +  FG ID  I NAG       L     ++I   
Sbjct: 52  ----NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAA 107

Query: 153 -EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            + I   N+ G I   +  +  +      G +     + +G        +Y +TK  +  
Sbjct: 108 FDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFT-ISNAGFYPNGGGPLYTATKHAVVG 164

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLL 240
           L   +  E     V V+  +PG + TDL 
Sbjct: 165 LVRQMAFELAP-HVRVNGVAPGGMNTDLR 192

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  116 bits (293), Expect = 1e-30
 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 24/207 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGST G+G  +A+    +G  +V+      +    + E+           G    
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP--ALAEIA--------RHGV--- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K      D+ + A ++ L   A  EFG +DI +NNAG      P+ QF  E  +
Sbjct: 52  ------KAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHV-APVEQFPLESWD 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQL 212
           +I++ NL      TR A+  MR +   G I N+    G  GS     A Y + K G+  L
Sbjct: 105 KIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASVHGLVGS--TGKAAYVAAKHGVVGL 161

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
              +  E+  S V  +   PG VLT L
Sbjct: 162 TKVVGLETATSNVTCNAICPGWVLTPL 188

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  116 bits (294), Expect = 1e-30
 Identities = 51/235 (21%), Positives = 97/235 (41%), Gaps = 20/235 (8%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG   G+G+  A+ F+  G +VV+A  + +  +     +                  
Sbjct: 19  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--------------- 63

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 154
                ++ + CDV +  DV+ L +  + + G +DI   N G  +     +L+  NE+ ++
Sbjct: 64  ---DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKR 120

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           ++  N+ G+ L  + A RVM    K G I       S  +   ++ VY +TK  +  L  
Sbjct: 121 VMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTT 179

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 269
           SL  E     + V+  SP +V + LL     + + ++  +  +        L   
Sbjct: 180 SLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE 234

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  116 bits (293), Expect = 1e-30
 Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 23/206 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +ITG+  G+G   +R    +G RVV+A      +      +           G      
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----------GR----- 57

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEIEQ 154
                      D+     V+ L +F ++ FG +DI  NNA  ++     + Q T +  + 
Sbjct: 58  ----GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDD 113

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQA 214
             + N  G++L  + A+  +     GG I N+  + +  ++  ++  Y  TK  +  L  
Sbjct: 114 TFTVNARGTMLMCKYAIPRLISA-GGGAIVNI-SSATAHAAYDMSTAYACTKAAIETLTR 171

Query: 215 SLFKESKRSKVGVHTASPGMVLTDLL 240
            +  +  R  V  +  +PG+V T  L
Sbjct: 172 YVATQYGRHGVRCNAIAPGLVRTPRL 197

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  115 bits (290), Expect = 2e-30
 Identities = 46/236 (19%), Positives = 86/236 (36%), Gaps = 28/236 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITG   G+G+A+A  F + G  + +A             +           G    
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIR--------NLGR--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  + CDV +P DV+      ++ FG  DI +NNAG      P  + T E+ +
Sbjct: 55  ------RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWK 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +    N+    L  +  +  M+     G I N+  + +          Y STK       
Sbjct: 108 KTFEINVDSGFLMAKAFVPGMKRN-GWGRIINL-TSTTYWLKIEAYTHYISTKAANIGFT 165

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE------LPETVA 263
            +L  +  +  + V+  +P +V T    + +      +   + +      +P  + 
Sbjct: 166 RALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLT 221

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  115 bits (291), Expect = 3e-30
 Identities = 49/209 (23%), Positives = 83/209 (39%), Gaps = 30/209 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + VVITG++ G+G+A+AR F   G  +++ +R  E        L+  L            
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVE-------RLKA-LNLP--------- 59

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                        DV +          A   +G  D  +NNAG       +      E +
Sbjct: 60  ------NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQ 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
           ++   N++G +   +  +  M+ +   G I N+    S  G  + P  A Y  TK  +  
Sbjct: 113 RMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINI---SSIAGKKTFPDHAAYCGTKFAVHA 168

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLL 240
           +  ++ +E   S V V T +P  V T+LL
Sbjct: 169 ISENVREEVAASNVRVMTIAPSAVKTELL 197

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  114 bits (288), Expect = 4e-30
 Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 33/207 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
            N ++TG ++G+GKA+    L + +  V+     +                  +      
Sbjct: 5   ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ------------------SFSA--- 43

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  I  D+ +  D+  +    + +  S D    NAG       +     E I+
Sbjct: 44  -----ENLKFIKADLTKQQDITNV--LDIIKNVSFDGIFLNAGILI-KGSIFDIDIESIK 95

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  N+  SI   +     ++    G  I    G+     + P +  Y  +K  + Q+ 
Sbjct: 96  KVLDLNVWSSIYFIKGLENNLK---VGASIVFN-GSDQCFIAKPNSFAYTLSKGAIAQMT 151

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            SL  +  + ++ V+T  PG V TDL 
Sbjct: 152 KSLALDLAKYQIRVNTVCPGTVDTDLY 178

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  114 bits (289), Expect = 4e-30
 Identities = 37/220 (16%), Positives = 78/220 (35%), Gaps = 33/220 (15%)

Query: 22  NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL 81
           N+  + H       ++ITG+++ +G   A   L  G RV+++ R+  +   +VTEL +  
Sbjct: 16  NLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHA---SVTELRQ-- 70

Query: 82  KEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF 141
                            A    +  D      +    +    +  S+   ++NA      
Sbjct: 71  -----------------AGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW--L 111

Query: 142 KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM-DGAGSGGSSTPLTA 200
                   +   ++ S +++   L       ++    +   I ++ D     G  +    
Sbjct: 112 AETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADIVHISDDVTRKG--SSKHI 168

Query: 201 VYGSTKCGLRQLQASLFKE-SKRSKV-GVHTASPGMVLTD 238
            Y +TK GL  L  S     +   KV G+   +P +++  
Sbjct: 169 AYCATKAGLESLTLSFAARFAPLVKVNGI---APALLMFQ 205

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  114 bits (289), Expect = 6e-30
 Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG   G+G+A A  F  +G  VVVA  + ++      E+           G      
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----------GS----- 73

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               K  G+  DV    D + +      ++G +D+ +NNAG       ++    E  ++I
Sbjct: 74  ----KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFG-TTGNVVTIPEETWDRI 128

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +S N+ G  LC++  + VMR    GG I N   + +  S+      Y ++K  +  L  +
Sbjct: 129 MSVNVKGIFLCSKYVIPVMRRN-GGGSIINT-TSYTATSAIADRTAYVASKGAISSLTRA 186

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           +  +  +  + V+  +PG + +   
Sbjct: 187 MAMDHAKEGIRVNAVAPGTIDSPYF 211

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  113 bits (286), Expect = 1e-29
 Identities = 34/206 (16%), Positives = 80/206 (38%), Gaps = 17/206 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R +++TG++ G+G+  A  +   G  V++  R+ E +R   + +            G   
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN--------EETGRQ- 63

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +    C   + Q+L+      +  +D  ++NAG      P+ +   +  +
Sbjct: 64  -----PQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQ 118

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  N+  + + T+  + ++     G  +F     G  G        Y ++K     + 
Sbjct: 119 DVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR--ANWGAYAASKFATEGMM 176

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
             L  E +  ++ V+  +PG   T +
Sbjct: 177 QVLADEYQ-QRLRVNCINPGGTRTAM 201

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  113 bits (285), Expect = 1e-29
 Identities = 51/235 (21%), Positives = 96/235 (40%), Gaps = 27/235 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+GKA+A      G  V+V+  ++E  +     +           G    
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----------GK--- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   IA D+ +P  V+ L        G IDI +NNA     F        +   
Sbjct: 53  ------KARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWR 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +I+  NL G+ + TR     MR   K G + ++  + +  + TP  A Y + K G+    
Sbjct: 106 KIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISI-ASNTFFAGTPNMAAYVAAKGGVIGFT 164

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-----PETVA 263
            +L  E  +  +  +  +PG++ +D + +    +      ++  +     PE +A
Sbjct: 165 RALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIA 219

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  113 bits (286), Expect = 1e-29
 Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 39/237 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+  G+G A+      +G RV VA R+   +                       
Sbjct: 29  KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI----------------------- 65

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A    +  D+ E A    L        G +DI +NNAG       + + T+ +  
Sbjct: 66  -----AADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWS 119

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             +  N+       R A+ +M     GG I N+  +  G    P  A+Y  TK  L  L 
Sbjct: 120 LSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNV-ASCWGLRPGPGHALYCLTKAALASLT 177

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 270
             +  +     + ++   P  V T +L        +  F      P+     L   +
Sbjct: 178 QCMGMDHAPQGIRINAVCPNEVNTPML--------RTGFAKRGFDPDRAVAELGRTV 226

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  113 bits (285), Expect = 2e-29
 Identities = 45/205 (21%), Positives = 81/205 (39%), Gaps = 32/205 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG++ G+G+A+A  F+  G +V+  S                        G      
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP--------------------GE----- 45

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
              AK   I CDV  P  V+   +    E+GSI + +NNAG    +  +   +  E  +I
Sbjct: 46  ---AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIE-SYGKIESMSMGEWRRI 101

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G    ++ A+  M    +   I N+  +      T   + Y ++K  +  L  S
Sbjct: 102 IDVNLFGYYYASKFAIPYMIRS-RDPSIVNI-SSVQASIITKNASAYVTSKHAVIGLTKS 159

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           +  +     +  +   P  + T L+
Sbjct: 160 IALDYAP-LLRCNAVCPATIDTPLV 183

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  112 bits (284), Expect = 2e-29
 Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 26/207 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG  RG+G+A+A+ F   G  V +     E   +              A      
Sbjct: 7   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV--------------AEAI--- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A    D+ +  +  +    A    G +D+ +NNA         L     E  
Sbjct: 50  ------GGAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWR 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL   +  +  A R MR    GG I N+  +  G  +    A Y ++K GL  L 
Sbjct: 103 RVLEVNLTAPMHLSALAAREMRKV-GGGAIVNV-ASVQGLFAEQENAAYNASKGGLVNLT 160

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            SL  +    ++ V+  +PG + T+ +
Sbjct: 161 RSLALDLAPLRIRVNAVAPGAIATEAV 187

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  112 bits (283), Expect = 5e-29
 Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 22/209 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSS 92
              ++TG  RG+G  +AR    SG  + +     +E V   + EL           G   
Sbjct: 30  PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS--------GLGA-- 79

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEE 151
                  +V  +  D+ + +  Q   +  V EFG ID  +NNAG  +      L    E 
Sbjct: 80  -------RVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN 132

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
            + IV  NL G++  T+  ++ M          I N+  + S   ++P    Y  +K GL
Sbjct: 133 FDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINI-TSVSAVMTSPERLDYCMSKAGL 191

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTD 238
                 L      + + V    PG++ +D
Sbjct: 192 AAFSQGLALRLAETGIAVFEVRPGIIRSD 220

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  111 bits (280), Expect = 1e-28
 Identities = 62/229 (27%), Positives = 96/229 (41%), Gaps = 32/229 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+VV+TG T+G+G+ +A  F  +G  V VA RS+  +   V +L++          G   
Sbjct: 11  RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ-------LGSG--- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV G+  DV + A    L+  AV EFG ID+   NAG      PL   T E++ 
Sbjct: 61  ------KVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD-APLATMTPEQLN 113

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--PLT-----AVYGSTK 206
            I + N+ G+    +  +  +      G +          SS   P+T     + YG+TK
Sbjct: 114 GIFAVNVNGTFYAVQACLDALIAS-GSGRVVLT-------SSITGPITGYPGWSHYGATK 165

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 255
                   +   E    K+ V+   PG ++T+ LL         M   I
Sbjct: 166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSI 214

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  111 bits (280), Expect = 1e-28
 Identities = 44/211 (20%), Positives = 82/211 (38%), Gaps = 32/211 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  V+TG+  G+G+A+A  +  +G  V+   R ++ V+    E+           GG   
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGR-TDGVKEVADEIA--------DGGG--- 79

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  D+ +      ++   +     +D+ +NNAG      P  + +     
Sbjct: 80  ------SAEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIAR-APAEEVSLGRWR 131

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS-----GGSSTPLTAVYGSTKCG 208
           ++++ NL  + + +R     M      G I  +    S     GG      A Y ++K  
Sbjct: 132 EVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVTI---ASMLSFQGG---RNVAAYAASKHA 184

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
           +  L  +L  E     VGV+  +PG V+T  
Sbjct: 185 VVGLTRALASEWAGRGVGVNALAPGYVVTAN 215

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  110 bits (278), Expect = 1e-28
 Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 34/211 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG   G+G  + +  L  G +V  +  +  + +    EL           G      
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----------GE----- 52

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +   +  DV   AD   +        G++++ +NNAG       +     E+  ++
Sbjct: 53  ----RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGIL-LPGDMETGRLEDFSRL 107

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYGSTKCGLRQLQA 214
           +  N     +  ++ +  M++   GG I NM   +          A Y ++K  +  L  
Sbjct: 108 LKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPI--EQYAGYSASKAAVSALTR 163

Query: 215 SLFKESKRSKVG-----VHTASPGMVLTDLL 240
           +     ++         +H   P  + T ++
Sbjct: 164 AAALSCRKQGYAIRVNSIH---PDGIYTPMM 191

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  110 bits (278), Expect = 2e-28
 Identities = 45/205 (21%), Positives = 79/205 (38%), Gaps = 31/205 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG + G+G A+    +  G +VV  S   +S                          
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDH------------------- 57

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                      DV    +V++       ++G IDI +NNAG    + PL     E   +I
Sbjct: 58  --------FKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIE-QYSPLHLTPTEIWRRI 108

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  N+ GS L  +  + VM      G I N+  +    ++T   A Y ++K  L  L  S
Sbjct: 109 IDVNVNGSYLMAKYTIPVMLAI-GHGSIINI-ASVQSYAATKNAAAYVTSKHALLGLTRS 166

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           +  +    K+  +   PG ++T ++
Sbjct: 167 VAIDYAP-KIRCNAVCPGTIMTPMV 190

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  109 bits (276), Expect = 3e-28
 Identities = 32/207 (15%), Positives = 60/207 (28%), Gaps = 29/207 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++T      G   A     +G  V     S +       ELE               
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFK----QKDELEA-------------- 43

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                              +  +L     + +G +D+ ++N      F+P+ ++  E+  
Sbjct: 44  -----FAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYR 98

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLRQ 211
             V    +            M+ + K GHI  +    S          + Y S + G   
Sbjct: 99  GAVEALQIRPFALVNAVASQMKKR-KSGHIIFI---TSATPFGPWKELSTYTSARAGACT 154

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTD 238
           L  +L KE     + V    P  + ++
Sbjct: 155 LANALSKELGEYNIPVFAIGPNYLHSE 181

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  110 bits (277), Expect = 3e-28
 Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 22/209 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +   +TG + G+G A+AR     G  V   +R +++V   V  L         AAG    
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLR--------AAGH--- 73

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V G +CDV    +V      AV  FG I I +N+AG N G        +    
Sbjct: 74  ------DVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG-GETADLDDALWA 126

Query: 154 QIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            ++ TNL G    TRE +R   MR+    G I N+  +  G       A Y ++K G+  
Sbjct: 127 DVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVNI-ASTGGKQGVMYAAPYTASKHGVVG 184

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLL 240
              S+  E  ++ + V+   PG V T + 
Sbjct: 185 FTKSVGFELAKTGITVNAVCPGYVETPMA 213

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  108 bits (273), Expect = 1e-27
 Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 32/208 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++TG+  G+G+A    F   G  +V   R    +   V  LE               
Sbjct: 7   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--------------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+   +  DV +P  V+ +   A+ EFG +    + AG             E  E
Sbjct: 52  -----AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWE 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGLR 210
           +++  NL GS L  R+A  V+    +GG +       G G+ G      A Y + K G+ 
Sbjct: 106 KVLRVNLTGSFLVARKAGEVLE---EGGSLVLTGSVAGLGAFGL-----AHYAAGKLGVV 157

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
            L  +L  E  R  V V+   PG++ T 
Sbjct: 158 GLARTLALELARKGVRVNVLLPGLIQTP 185

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  108 bits (272), Expect = 1e-27
 Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 28/212 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG +RG+G+ +A+  L +G RV + +R +E+   T T L          A G   
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS---------AYG--- 77

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     I  D+   A  ++L+         +DI +NNAGT+ G   L  +     E
Sbjct: 78  ------DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG-AALESYPVSGWE 130

Query: 154 QIVSTNLVGSILCTREAMRVMRDQP---KGGHIFN---MDGAGSGGSSTPLTAVYGSTKC 207
           +++  N+     C ++ + ++R          + N   + G  + G        YG +K 
Sbjct: 131 KVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAY---AYGPSKA 187

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
            L QL   L KE     + V+  +PG   + +
Sbjct: 188 ALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  107 bits (270), Expect = 3e-27
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 34/213 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG+T G+G  +AR     G RV V +R  E +R T+ EL          AG    
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELR--------EAGV--- 71

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +  G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E   
Sbjct: 72  ------EADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWL 124

Query: 154 QIVSTNLVGSILCTREAMRV--MRDQPKGGHIFNMDGAGSGGSST------PLTAVYGST 205
            +V TNL G    T++ ++   M ++   G I N+       +ST         A Y ++
Sbjct: 125 DVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNI-------ASTGGKQGVVHAAPYSAS 176

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 238
           K G+     +L  E  R+ + V+   PG V T 
Sbjct: 177 KHGVVGFTKALGLELARTGITVNAVCPGFVETP 209

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  106 bits (268), Expect = 4e-27
 Identities = 49/219 (22%), Positives = 87/219 (39%), Gaps = 29/219 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 92
           +  ++TG++RG+G+A+A+     G  V +      E    TV E++        + GG  
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ--------SNGG-- 57

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEF------GSIDIWINNAGTNKGFKPLLQ 146
                      I  ++     V+ L +   NE          DI INNAG       + +
Sbjct: 58  -------SAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEE 109

Query: 147 FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTK 206
            T +  +++VS N        ++A+  +RD      I N+  + +   S P    Y  TK
Sbjct: 110 TTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINI-SSAATRISLPDFIAYSMTK 165

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
             +  +  +L K+     + V+   PG V TD+     +
Sbjct: 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS 204

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  107 bits (269), Expect = 5e-27
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 32/229 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG T+G+G+ +A  F  +G  V VA+RS   +     EL E          G   
Sbjct: 42  RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE-------LGAG--- 91

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V G+  DV +P      +   V+ FG++D+   NAG       L   T E++ 
Sbjct: 92  ------NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLS 144

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST--PLT-----AVYGSTK 206
           +++  N+ G++   +  +  +      G +          SS   P+T     + YG++K
Sbjct: 145 EVLDVNVKGTVYTVQACLAPLTAS-GRGRVILT-------SSITGPVTGYPGWSHYGASK 196

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII 255
                   +   E     V V+   PG +LT+ L+         M   I
Sbjct: 197 AAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSI 245

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  105 bits (264), Expect = 1e-26
 Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 29/207 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG +RG+G+A+A   +  G RV +ASR+ E       E  ++L            
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPE-------EAAQSL------------ 43

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  D+ E  D + L   A+   G + + ++ A  N   KP L+ + EE  
Sbjct: 44  ------GAVPLPTDL-EKDDPKGLVKRALEALGGLHVLVHAAAVNV-RKPALELSYEEWR 95

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG-AGSGGSSTPLTAVYGSTKCGLRQL 212
           +++  +L  + L  + A   M +    G +  +                Y + K  L  L
Sbjct: 96  RVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGL 154

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDL 239
             +L KE  R  + V+   PG V T+ 
Sbjct: 155 TRALAKEWARLGIRVNLLCPGYVETEF 181

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  104 bits (263), Expect = 2e-26
 Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 30/207 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +NV +TG+ +G+G A A  F+ +G +V    ++                           
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT------------------QEQY--- 46

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A    DV + A V ++    + E   +D  +N AG  +      Q + E+ +
Sbjct: 47  ------PFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQ 99

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           Q  + N+ G+    ++ M   R Q +GG I  +  + +  +     + YG++K  L+ L 
Sbjct: 100 QTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTV-ASDAAHTPRIGMSAYGASKAALKSLA 157

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            S+  E   S V  +  SPG   TD+ 
Sbjct: 158 LSVGLELAGSGVRCNVVSPGSTDTDMQ 184

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  105 bits (263), Expect = 3e-26
 Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 38/234 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSS 92
              VITG  R +G ++A      G RVVV    S  + +  V EL         A  G  
Sbjct: 12  PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA-------ARAG-- 62

Query: 93  KKNLVHAKVAGIACDVCEPADV----QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF- 147
                         D+   + +    + + + +   FG  D+ +NNA       PLL   
Sbjct: 63  -------SAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGD 114

Query: 148 ----------TNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMDGAGSGG 193
                      + ++ ++  +N V  +   R   R   +      +   + N+       
Sbjct: 115 DTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNL-CDAMTD 173

Query: 194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
              P   VY   K  L  L  +   E     + V+  +PG+ L    +   T +
Sbjct: 174 LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 227

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  103 bits (259), Expect = 1e-25
 Identities = 45/248 (18%), Positives = 85/248 (34%), Gaps = 32/248 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA-------------SRSSESVRMTVTELEENLK 82
             ITG+ RG G+A A      G  ++                 S + +  TV  +E    
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE---- 69

Query: 83  EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 142
               AA           ++     D  +   ++K+ +  V   G +DI + NAG     +
Sbjct: 70  ----AANR---------RIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA-APQ 115

Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 202
                T E+   ++  N+ G+          + +  +GG I  +  + +G    P    Y
Sbjct: 116 AWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILI-SSAAGMKMQPFMIHY 174

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 262
            ++K  +  L  +   E  +  + V++  PG V T +          Q      +L   +
Sbjct: 175 TASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVL 234

Query: 263 ARTLVPRI 270
              L   +
Sbjct: 235 TPFLPDWV 242

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  102 bits (257), Expect = 2e-25
 Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 23/209 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+ +IT  T+GLGK +  + L  G  V V   S            E +KE          
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT-------TAMETMKETYKDVEE--- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG---TNKGFKPLLQFTNE 150
                 ++  +  DV +  D+ K+   A++ FG ID  INNAG     +    L+ +  +
Sbjct: 58  ------RLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKK--LVDYEED 109

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS-TPLTAVYGSTKCGL 209
           E  +++  NL       +  + VMR Q   G I N    G+  +      + + + K GL
Sbjct: 110 EWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGADSAPGWIYRSAFAAAKVGL 168

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTD 238
             L  ++  E     +  +   PG ++ +
Sbjct: 169 VSLTKTVAYEEAEYGITANMVCPGDIIGE 197

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  102 bits (257), Expect = 2e-25
 Identities = 54/255 (21%), Positives = 95/255 (37%), Gaps = 41/255 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA-------------SRSSESVRMTVTELEENLK 82
             ITG+ RG G++ A      G  ++                 S E +  T   +E    
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE---- 73

Query: 83  EGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK 142
                 G          K      DV + A +++L    + +FG +D+ + NAG    + 
Sbjct: 74  ----DQGR---------KALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WG 119

Query: 143 PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVY 202
            + + T+E+ + ++  NL G+    R  +  M +   GG I  +  + +G  +TP    Y
Sbjct: 120 RVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV-SSSAGLKATPGNGHY 178

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV 262
            ++K GL  L  +L  E     + V++  P  V T +      I+ + M  I    P  V
Sbjct: 179 SASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM------IEPEAMMEIFARHPSFV 232

Query: 263 ---ARTLVPRIRVVK 274
                  V     + 
Sbjct: 233 HSFPPMPVQPNGFMT 247

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  101 bits (255), Expect = 2e-25
 Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 28/207 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++T + +G+G+A A  F   G +V+    +   ++                      
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP---------------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +     DV +   + +      NE   +D+  N AG       +L    ++ +
Sbjct: 51  ------GIQTRVLDVTKKKQIDQ----FANEVERLDVLFNVAGFVH-HGTVLDCEEKDWD 99

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             ++ N+    L  +  +  M  Q K G+I NM    S         VY +TK  +  L 
Sbjct: 100 FSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLT 158

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            S+  +  +  +  +   PG V T  L
Sbjct: 159 KSVAADFIQQGIRCNCVCPGTVDTPSL 185

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  102 bits (257), Expect = 3e-25
 Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 35/219 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV--RMTVTELEENLKEGMMAAGGS 91
           R  ++TG   G+G+A A  +   G  V +    +E    +     +E          G  
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIE--------ECGR- 100

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                   K   +  D+ + +  + L + A    G +DI    AG       +   T+E+
Sbjct: 101 --------KAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQ 152

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS------TPLTAVYGST 205
            +Q  + N+      T+EA+ ++   PKG  I          SS      +P    Y +T
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLL---PKGASIITT-------SSIQAYQPSPHLLDYAAT 202

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS 244
           K  +      L K+     + V+  +PG + T L +SG 
Sbjct: 203 KAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG 241

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  101 bits (253), Expect = 4e-25
 Identities = 50/209 (23%), Positives = 82/209 (39%), Gaps = 34/209 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG+  G+G+A    F   G R+V        +R     +                
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---------------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                     +  DV +PA V++    A+   G +D  ++ AG T   F    +   E+ 
Sbjct: 50  ------GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDW 101

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD---GAGSGGSSTPLTAVYGSTKCGL 209
           E ++  NL GS L  + A   MR++   G I         G+ G      A Y ++  G+
Sbjct: 102 ELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTASRVYLGNLGQ-----ANYAASMAGV 155

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTD 238
             L  +L  E  R  + V+T +PG + T 
Sbjct: 156 VGLTRTLALELGRWGIRVNTLAPGFIETR 184

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  101 bits (255), Expect = 5e-25
 Identities = 42/228 (18%), Positives = 83/228 (36%), Gaps = 34/228 (14%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA----------------SRSSESVRMTVTELEE 79
             +TG+ RG G++ A      G  ++                  + + E +  T   ++ 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK- 72

Query: 80  NLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK 139
                               ++     DV +   ++   +  V + G +DI + NAG   
Sbjct: 73  -------GHNR---------RIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGN 116

Query: 140 GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT 199
           G   L + + E+  +++  NL G     +  +  M    +GG I     +  G  + P T
Sbjct: 117 GGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT-SSVGGLKAYPHT 175

Query: 200 AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
             Y + K G+  L  +   E  +  + V++  P  V T +L +  T +
Sbjct: 176 GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFK 223

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  100 bits (252), Expect = 8e-25
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 14/155 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG+  G+G+A++      G  V        + + TV  L     +     G    
Sbjct: 8   ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG---- 63

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSI-DIWINNAG-TNKGFKPLLQFTNEE 151
                   A    DV E    + L       F     + ++ AG T   F  LL  + ++
Sbjct: 64  ------NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDD 115

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
            +++++ NL G+ L T+ A + +      G I N+
Sbjct: 116 WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINI 150

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  100 bits (252), Expect = 1e-24
 Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 21/154 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ RG+G+ +A+    S   V+  SR+ +S    V E++        + G    
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIK--------SFGY--- 93

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                 + +G A DV +  ++ ++ N  + E  ++DI +NNAG T       L+  N+E 
Sbjct: 94  ------ESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL--FLRMKNDEW 145

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           E ++ TNL      T+   + M +  + G I N+
Sbjct: 146 EDVLRTNLNSLFYITQPISKRMINN-RYGRIINI 178

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 99.3 bits (248), Expect = 2e-24
 Identities = 33/208 (15%), Positives = 61/208 (29%), Gaps = 31/208 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++ G    LG    + F      V               E                 
Sbjct: 8   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-------EEAS-------------- 46

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                + +  +     E AD        +     +D  +  AG   G     +   +  +
Sbjct: 47  ----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +   ++  S + +  A + ++   +GG +    GA +    TP    YG  K  + QL 
Sbjct: 103 LMWKQSIWTSTISSHLATKHLK---EGGLLTLA-GAKAALDGTPGMIGYGMAKGAVHQLC 158

Query: 214 ASLFKESKRSKVG--VHTASPGMVLTDL 239
            SL  ++     G       P  + T +
Sbjct: 159 QSLAGKNSGMPSGAAAIAVLPVTLDTPM 186

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  100 bits (250), Expect = 3e-24
 Identities = 41/229 (17%), Positives = 77/229 (33%), Gaps = 38/229 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSS 92
              V+TG+ + +G+A+A +   +G RVV+   +S E+      EL +             
Sbjct: 24  PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK-------ERSN-- 74

Query: 93  KKNLVHAKVAGIACDVCE----PADVQKLSNFAVNEFGSIDIWINNAGTNKGF------- 141
                         D+      PA  +++ N     FG  D+ +NNA             
Sbjct: 75  -------TAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDH 127

Query: 142 --KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGSGG 193
                 +    ++ +++ TN +   L T    +  +            I N+ D      
Sbjct: 128 EDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQP 187

Query: 194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
                 ++Y   K  L  L  S   E     + V+  +PG+ L  + + 
Sbjct: 188 --CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMG 234

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 97.0 bits (242), Expect = 6e-24
 Identities = 34/206 (16%), Positives = 62/206 (30%), Gaps = 45/206 (21%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             +++ G++  LG A+    L     V+ A R S  V                       
Sbjct: 4   MKILLIGASGTLGSAVKER-LEKKAEVITAGRHSGDVT---------------------- 40

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                        D+     ++K+      + G +D  ++  G+   F PL + T E+  
Sbjct: 41  ------------VDITNIDSIKKM----YEQVGKVDAIVSATGSAT-FSPLTELTPEKNA 83

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             +S+ L G I      +  + D    G      G           A        +    
Sbjct: 84  VTISSKLGGQINLVLLGIDSLND---KGSFTLTTGI-MMEDPIVQGASAAMANGAVTAFA 139

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            S   E  R  + ++T SP ++    
Sbjct: 140 KSAAIEMPR-GIRINTVSPNVLEESW 164

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 97.8 bits (244), Expect = 7e-24
 Identities = 32/210 (15%), Positives = 61/210 (29%), Gaps = 35/210 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V++ G    LG A+   F  +G  V+    S+                          
Sbjct: 4   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND------------------------ 39

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNE--FGSIDIWINNAGTNKGFKPLLQFTNEE 151
                     +  +       Q +     +      +D     AG   G     +   + 
Sbjct: 40  ---QADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKN 96

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
            + ++  ++  S +  + A   ++    GG +    GA +    TP    YG  K  +  
Sbjct: 97  ADLMIKQSVWSSAIAAKLATTHLK---PGGLLQLT-GAAAAMGPTPSMIGYGMAKAAVHH 152

Query: 212 LQASLFKESKRSKVG--VHTASPGMVLTDL 239
           L +SL  +         V T  P  + T +
Sbjct: 153 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 97.2 bits (243), Expect = 1e-23
 Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGS+RGLGKA+A +    G  +V+    +           +   E   AAG    
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAS-------TSLDATAEEFKAAGI--- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                  V     DV  P DV+ +   A++ FG IDI +NNAG T      +L+ + ++ 
Sbjct: 56  ------NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDW 107

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           + +++TNL  + LCT+   ++M  Q K G I N+
Sbjct: 108 DDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINI 140

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 97.2 bits (243), Expect = 1e-23
 Identities = 43/151 (28%), Positives = 79/151 (52%), Gaps = 18/151 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG++RG+GKA+A     +G +V+V    S        +  E + + + A GG     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGG----- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +      DV + ADV+ +   A++ +G+ID+ +NNAG  +    L++    + +++
Sbjct: 52  ----QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD-TLLIRMKKSQWDEV 106

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           +  NL G  LCT+ A ++M  + + G I N+
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKK-RKGRIINI 136

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 98.4 bits (246), Expect = 1e-23
 Identities = 45/224 (20%), Positives = 82/224 (36%), Gaps = 30/224 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKE 83
             ITG+ RG G++ A      G  ++                + + +  TV ++E     
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE----- 85

Query: 84  GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 143
              A G          ++     DV +   +Q   +  V + G +DI + NA        
Sbjct: 86  ---ALGR---------RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTR 133

Query: 144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYG 203
           L +   +    ++  NL G+ +  R A+  +    +GG I     +  G         Y 
Sbjct: 134 LNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFT-SSIGGLRGAENIGNYI 192

Query: 204 STKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
           ++K GL  L  ++  E     + V+   P  V T +LL+  T +
Sbjct: 193 ASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYR 236

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G+A+A E    G  V+  + +           +         AG    
Sbjct: 29  QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFK--------QAGL--- 77

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                 +  G   +V +   V  L    + EFG++++ +NNAG T       ++  ++E 
Sbjct: 78  ------EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQL--AMRMKDDEW 129

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           + ++ TNL      +R  +R M    +GG I N+
Sbjct: 130 DAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNI 162

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 18/153 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++RG+G+A+A E   +G +V V   SS           + +   + AAGG   
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-------GAADEVVAAIAAAGG--- 78

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +  DV + ++V+ L    +  +G +D+ +NNAG  +    LL+   ++ +
Sbjct: 79  ------EAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD-TLLLRMKRDDWQ 131

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
            ++  NL G  LC+R A ++M  Q + G I N+
Sbjct: 132 SVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINI 163

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 97.0 bits (242), Expect = 1e-23
 Identities = 45/272 (16%), Positives = 89/272 (32%), Gaps = 53/272 (19%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVV--ASRSSESVRMTVTELEENLKEGMMAAGG 90
           P +VV+TG+ RG+G  L ++ +   +   +   +R  E      TEL+            
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEK----ATELKS----------- 47

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFT 148
                +  ++V  +   V     +    +      G   + + INNAG    +    +  
Sbjct: 48  -----IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPN 102

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMR----------DQPKGGHIFNMD-GAGS-----G 192
              I + +  N    +L T++ + +++                 +  +  G GS      
Sbjct: 103 RAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162

Query: 193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
           GS+      Y  +K  +     +L  + K   V V    PG V T+L    + +      
Sbjct: 163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT----- 217

Query: 253 NIICELPETVARTLVPRIRVVKG--SGKAINY 282
                  E     L+     +    +G+    
Sbjct: 218 ------VEQSTAELISSFNKLDNSHNGRFFMR 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 96.4 bits (241), Expect = 2e-23
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 20/154 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TGSTRG+G+A+A +   +G  V++   S E         +   +E     G    
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGE-------RAKAVAEEIANKYGV--- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                 K  G+  ++     + K      N    IDI +NNAG T       L+ +  + 
Sbjct: 58  ------KAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL--FLRMSLLDW 109

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           E+++  NL G+ L T+ ++R M  Q + G I N+
Sbjct: 110 EEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNI 142

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 96.3 bits (240), Expect = 4e-23
 Identities = 52/268 (19%), Positives = 89/268 (33%), Gaps = 48/268 (17%)

Query: 34  RNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
            +++ITG  RGLG  L +  L        +    R+ E       ELE+  K        
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA----KELEDLAKN------- 70

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFT 148
                  H+ +  +  D+       KL            +++  NNAG       +    
Sbjct: 71  -------HSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVR 123

Query: 149 NEEIEQIVSTNLVGSILCTR----------EAMRVMRDQPKGGHIFNMD-GAGS-GGSST 196
           ++E+   + TN V  I+  +          +A            I NM    GS  G++ 
Sbjct: 124 SQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD 183

Query: 197 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC 256
                Y ++K  L     SL  +    ++   +  PG V TD+  S + +          
Sbjct: 184 GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLD--------- 234

Query: 257 ELPETVARTLVPRIRVVKG--SGKAINY 282
               T    +V  I  +    +G  +NY
Sbjct: 235 --VPTSTGQIVQTISKLGEKQNGGFVNY 260

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 95.2 bits (238), Expect = 5e-23
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G+A+A +    G  VVV    +E       +    + + +   G    
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE-------QKANEVVDEIKKLGS--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV    DV  +    V+ FG +DI +NNAG  K    L++   EE +
Sbjct: 55  ------DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD-NLLMRMKEEEWD 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
            +++TNL G  LCT+   R M  Q + G I N+
Sbjct: 108 TVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNI 139

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 95.3 bits (238), Expect = 6e-23
 Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G  +A      G  VV  + S  S       ++          G    
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMK--------EKGF--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                 K  G+  ++ +   +Q        E  +IDI +NNAG T      +++ + +E 
Sbjct: 55  ------KARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRDNL--MMRMSEDEW 106

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           + +++TNL      ++E +R M  + + G I ++
Sbjct: 107 QSVINTNLSSIFRMSKECVRGMMKK-RWGRIISI 139

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 95.3 bits (238), Expect = 7e-23
 Identities = 48/208 (23%), Positives = 77/208 (37%), Gaps = 25/208 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R   +TG   G+G ++ +     G RVV     +               E   A G    
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS-------PRRVKWLEDQKALGF--- 63

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                        +V +    ++  +    E G ID+ +NNAG T        + T E+ 
Sbjct: 64  ------DFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV--FRKMTREDW 115

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 210
           + ++ TNL      T++ +  M ++   G I N+    S  G         Y + K G+ 
Sbjct: 116 QAVIDTNLTSLFNVTKQVIDGMVER-GWGRIINI---SSVNGQKGQFGQTNYSTAKAGIH 171

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
               SL +E     V V+T SPG + TD
Sbjct: 172 GFTMSLAQEVATKGVTVNTVSPGYIGTD 199

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 95.9 bits (239), Expect = 8e-23
 Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 25/236 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGS- 91
              ++TG+ + LG+++A      G  V +   RS+         L        +      
Sbjct: 10  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 69

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
           S         A  +  V       +L       +G  D+ +NNA +     PLL+   + 
Sbjct: 70  SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDG 128

Query: 152 --------------IEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGS 191
                            +  +N +      +     +   P         I NM D   +
Sbjct: 129 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 188

Query: 192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
                    +Y   K  L  L  S   E    ++ V+   PG+ +    +  +  +
Sbjct: 189 QP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWE 242

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 94.9 bits (237), Expect = 9e-23
 Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 20/154 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           ++ ++TG++RG+G+++A +    G  V V    S+       E  E + E + A G    
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK-------EKAEAVVEEIKAKGV--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                     I  +V +  +V+ +    V++FGS+D+ +NNAG T      L++   +E 
Sbjct: 55  ------DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEW 106

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           + ++ TNL G   C ++A   M  Q + G I N+
Sbjct: 107 DDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINL 139

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 94.5 bits (236), Expect = 1e-22
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 19/154 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  +ITG++RG+G+A+A      G  + +    +        E  E + E     G    
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNR-------EKAEEVAEEARRRGSPL- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                  VA +  ++ E      L + A    G +D  +NNAG T      L++  +E+ 
Sbjct: 54  -------VAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRDTL--LVRMKDEDW 104

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           E ++  NL      TREA+++M    + G I N+
Sbjct: 105 EAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNI 137

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 96.0 bits (239), Expect = 1e-22
 Identities = 37/226 (16%), Positives = 67/226 (29%), Gaps = 25/226 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGS- 91
              ++TG+ + LG+++A      G  V +   RS+         L        +      
Sbjct: 47  PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADL 106

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
           S         A  +  V       +L       +G  D+ +NNA +     PLL+   + 
Sbjct: 107 SNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDG 165

Query: 152 --------------IEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM-DGAGS 191
                            +  +N +      +     +   P         I NM D   +
Sbjct: 166 HEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTN 225

Query: 192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT 237
                    +Y   K  L  L  S   E    ++ V+   PG+ + 
Sbjct: 226 QP--LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL 269

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 94.2 bits (235), Expect = 2e-22
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 25/208 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R   +TG   GLG A++R    +G  V V+            +           AG    
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN-------DHVSTWLMHERDAGR--- 75

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                      A DV +    ++ +   + +FG +D+ INNAG T       ++ T  + 
Sbjct: 76  ------DFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRDAT--FMKMTKGDW 127

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 210
           + ++ T+L      T++ +  M ++ + G I N+   GS  G       A Y S K G+ 
Sbjct: 128 DAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNI---GSVNGSRGAFGQANYASAKAGIH 183

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
               +L  E+ +  + V+T SPG + T 
Sbjct: 184 GFTKTLALETAKRGITVNTVSPGYLATA 211

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 93.3 bits (233), Expect = 3e-22
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 24/154 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+GKA+A      G +V+  + S    +     L +              
Sbjct: 10  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD-------------- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                    G+A +V  P  ++ +     +EFG +DI +NNAG T      L++   EE 
Sbjct: 56  ------NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEW 107

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
             I+ TNL      ++  +R M  + + G I N+
Sbjct: 108 SDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINV 140

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 93.4 bits (233), Expect = 3e-22
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 39/207 (18%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++  ++RG+G+A+A      G  V + +R+           EE LK           
Sbjct: 20  KGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----------EELLKR---------- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                +    + CD+ +  D+         +   +DI + NAG  K      + TNE+ +
Sbjct: 59  -----SGHRYVVCDLRKDLDL------LFEKVKEVDILVLNAGGPKA-GFFDELTNEDFK 106

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQ 211
           + + +  +  I   R  +  M+++   G I  +    S    +P+       S +  L  
Sbjct: 107 EAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAI---TSFSVISPIENLYTSNSARMALTG 162

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTD 238
              +L  E     + V+  +PG   T+
Sbjct: 163 FLKTLSFEVAPYGITVNCVAPGWTETE 189

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 94.8 bits (236), Expect = 3e-22
 Identities = 45/213 (21%), Positives = 73/213 (34%), Gaps = 28/213 (13%)

Query: 32  GPRNVVITGSTRGLGKALAREFL---LSGDRVVVASRSSESVRMTVTELEENLKEGMMAA 88
               V+ITG + G+G  LA           +V    R  +    T   L E  +      
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK----TQGRLWEAARALACPP 56

Query: 89  GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNE--FGSIDIWINNAGTNKG-FKPLL 145
           G           +  +  DV +   V      A      G +D+ + NAG   G   PL 
Sbjct: 57  GS----------LETLQLDVRDSKSVAA----ARERVTEGRVDVLVCNAGL--GLLGPLE 100

Query: 146 QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGST 205
               + +  ++  N+VG++   +  +  M+ +   G +    G+  G    P   VY ++
Sbjct: 101 ALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVT-GSVGGLMGLPFNDVYCAS 158

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 238
           K  L  L  SL        V +     G V T 
Sbjct: 159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 93.0 bits (232), Expect = 4e-22
 Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 37/208 (17%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+A+     G +V V  R S +                        
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                  + G+  DV +   V +         G +++ ++NAG +   F  L++ T E+ 
Sbjct: 53  -----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKF 105

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 210
           E++++ NL G+    + A R M+   K G +  +   GS  G       A Y ++K G+ 
Sbjct: 106 EKVINANLTGAFRVAQRASRSMQRN-KFGRMIFI---GSVSGLWGIGNQANYAASKAGVI 161

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
            +  S+ +E  ++ V  +  +PG + TD
Sbjct: 162 GMARSIARELSKANVTANVVAPGYIDTD 189

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 93.0 bits (232), Expect = 4e-22
 Identities = 53/208 (25%), Positives = 85/208 (40%), Gaps = 37/208 (17%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+AR F  +GD+V +  RS E                         
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------------- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                     + CD+ +   V++         G +++ I NAG T      L++ + E+ 
Sbjct: 59  -----EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDF 111

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTKCGLR 210
             +V TNL G+    + A R M    K G +  +    S  G   +   A Y ++K GL 
Sbjct: 112 TSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLI---SSVVGLLGSAGQANYAASKAGLV 167

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTD 238
               SL +E     +  +  +PG V TD
Sbjct: 168 GFARSLARELGSRNITFNVVAPGFVDTD 195

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 93.0 bits (232), Expect = 8e-22
 Identities = 43/220 (19%), Positives = 76/220 (34%), Gaps = 37/220 (16%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKE 83
             ITG+ RG G+A A      G  ++                + E +  TV  +E     
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE----- 70

Query: 84  GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 143
                G          ++     DV +   +       ++E G +DI + NAG       
Sbjct: 71  ---DIGS---------RIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP---- 114

Query: 144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM---DGAGSGGSSTPLTA 200
            +   ++    ++  NL G     + A+  +  Q  GG I  +    G    GS+ P + 
Sbjct: 115 -MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSV 173

Query: 201 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
            Y + K G+  L            + V++  P  V T ++
Sbjct: 174 GYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMI 213

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 91.8 bits (229), Expect = 2e-21
 Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 24/154 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG+T G+G+A+AR F   G  V +     + ++    +L +              
Sbjct: 28  RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK-------------- 73

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG-TNKGFKPLLQFTNEEI 152
                  V   + ++ +   +++L+  A  E   IDI +NNAG T  G    ++  +++ 
Sbjct: 74  ------DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGL--FVRMQDQDW 125

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           + +++ NL  +   TRE +  M  + + G I N+
Sbjct: 126 DDVLAVNLTAASTLTRELIHSMMRR-RYGRIINI 158

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 91.2 bits (227), Expect = 3e-21
 Identities = 53/244 (21%), Positives = 81/244 (33%), Gaps = 51/244 (20%)

Query: 16  GTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT 75
           G M  A   ++          VITG   GLG A A   +  G   V+    +        
Sbjct: 1   GHMAAACRSVKG------LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK 54

Query: 76  ELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA 135
           +L           G                 DV    DVQ     A  +FG +D+ +N A
Sbjct: 55  KL-----------GN---------NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94

Query: 136 GTNKGFKPLLQ-----FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFN 185
           G     K          T E+ ++++  NL+G+    R     M           G I N
Sbjct: 95  GIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN 154

Query: 186 M------DG-AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD 238
                  +G  G         A Y ++K G+  +   + ++     + V T +PG+  T 
Sbjct: 155 TASVAAFEGQVGQ--------AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 206

Query: 239 LLLS 242
           LL S
Sbjct: 207 LLTS 210

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 91.2 bits (227), Expect = 3e-21
 Identities = 33/218 (15%), Positives = 66/218 (30%), Gaps = 38/218 (17%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            +++G   GLG+A  R     G  VV+A  ++E  +    EL           G      
Sbjct: 33  AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----------GN----- 76

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEE 151
               +   ++ +V     V      A          + + G     + +           
Sbjct: 77  ----RAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGG 132

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPK-----GGHIFNMDG----AGSGGSSTPLTAVY 202
             + +   L G+    R     +           G +          G  G        Y
Sbjct: 133 FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ-----TAY 187

Query: 203 GSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
            + K G+  L  +  ++   + + V+T +PG + T ++
Sbjct: 188 AAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIM 225

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 91.9 bits (229), Expect = 3e-21
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 43/230 (18%)

Query: 36  VVITGSTRGLGKA----LARE--------FLLSGDRVVVASRSSESVRMTVTELEENLKE 83
             ITG+ RG G+     LA++               +  A  S E ++ TV  +E     
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE----- 103

Query: 84  GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 143
                G          ++     DV + A +Q + + A+ EFG IDI ++N G +     
Sbjct: 104 ---EQGR---------RIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGE 150

Query: 144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------P 197
           ++  T+++   I+ TNL+G+    R  +  M ++ +GG +  +       SST      P
Sbjct: 151 VVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFV-------SSTVGLRGAP 203

Query: 198 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
             + Y ++K G++ L  SL  E  R  + V++ +PG V T++ L+   ++
Sbjct: 204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLK 253

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 92.9 bits (231), Expect = 7e-21
 Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 32/209 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEG 84
           R  V+TG+  GLG+  A  F   G +VVV            S  +  + V E+       
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIR------ 73

Query: 85  MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL 144
              AGG         +       V    D  K+   A+  FG +DI +NNAG  +  + L
Sbjct: 74  --KAGG---------EAVADYNSV---IDGAKVIETAIKAFGRVDILVNNAGILRD-RSL 118

Query: 145 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGS 204
           ++ + ++   +   +L GS  CT+ A   M+ Q  G  I     +G  G+       Y +
Sbjct: 119 VKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGN--FGQVNYTA 176

Query: 205 TKCGLRQLQASLFKESKRSKVGVHTASPG 233
            K GL  L  ++  E  R+ V  +   P 
Sbjct: 177 AKMGLIGLANTVAIEGARNNVLCNVIVPT 205

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 92.5 bits (230), Expect = 1e-20
 Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 34/210 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEG 84
           + V+ITG+  GLGK  + EF   G +VVV            +S++  + V E+       
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIV------ 62

Query: 85  MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL 144
               GG +  +           +V    D  K+   AV  FG++ + INNAG  +    +
Sbjct: 63  --KNGGVAVAD---------YNNV---LDGDKIVETAVKNFGTVHVIINNAGILRD-ASM 107

Query: 145 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYG 203
            + T ++ + ++  +L G+   T+ A    + Q K G I N    AG  G+     A Y 
Sbjct: 108 KKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-KYGRIVNTSSPAGLYGN--FGQANYA 164

Query: 204 STKCGLRQLQASLFKESKRSKVGVHTASPG 233
           S K  L     +L KE  +  +  +  +P 
Sbjct: 165 SAKSALLGFAETLAKEGAKYNIKANAIAPL 194

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 84.4 bits (209), Expect = 5e-18
 Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 24/200 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG+  GLGK  A+ F   G +VVV      +   TV E++        AAGG   
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK--TVDEIK--------AAGG--- 369

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +      DV +  D + +    ++++G+IDI +NNAG  +  +   + + +E +
Sbjct: 370 ------EAWPDQHDVAK--DSEAIIKNVIDKYGTIDILVNNAGILRD-RSFAKMSKQEWD 420

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +   +L+G+   +R A     ++ + G I N+  + SG       A Y S+K G+  L 
Sbjct: 421 SVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINI-TSTSGIYGNFGQANYSSSKAGILGLS 478

Query: 214 ASLFKESKRSKVGVHTASPG 233
            ++  E  ++ + V+  +P 
Sbjct: 479 KTMAIEGAKNNIKVNIVAPH 498

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 89.5 bits (223), Expect = 2e-20
 Identities = 46/226 (20%), Positives = 84/226 (37%), Gaps = 34/226 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSS 92
           +NV+ITG   G+G+A++  F   G  + +A    E     T   +E          G   
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE--------KEGV-- 97

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  K   +  D+ +    + +    V + GS++I +NN       + L   T E++
Sbjct: 98  -------KCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL 150

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSS------TPLTAVYGSTK 206
           E+    N+      T+ A+  +    +G  I N        +S            Y +TK
Sbjct: 151 EKTFRINIFSYFHVTKAALSHL---KQGDVIINT-------ASIVAYEGNETLIDYSATK 200

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
             +     SL +   +  + V+  +PG + T L+ S    +    F
Sbjct: 201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQF 246

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 89.7 bits (223), Expect = 2e-20
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 34/210 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV---------ASRSSESVRMTVTELEENLKEG 84
           R V++TG+  GLG+A A  F   G  VVV           + S +    V E+       
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR------ 63

Query: 85  MMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL 144
               GG +  N            V      +KL   A++ FG ID+ +NNAG  +  +  
Sbjct: 64  --RRGGKAVAN---------YDSV---EAGEKLVKTALDTFGRIDVVVNNAGILRD-RSF 108

Query: 145 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD-GAGSGGSSTPLTAVYG 203
            + ++E+ + I   +L GS   TR A   M+ Q   G I      +G  G+     A Y 
Sbjct: 109 SRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASGIYGN--FGQANYS 165

Query: 204 STKCGLRQLQASLFKESKRSKVGVHTASPG 233
           + K GL  L  +L  E +++ +  +T +P 
Sbjct: 166 AAKLGLLGLANTLVIEGRKNNIHCNTIAPN 195

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 88.4 bits (220), Expect = 2e-20
 Identities = 55/222 (24%), Positives = 80/222 (36%), Gaps = 43/222 (19%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG++ GLG A+ R     G  V+       +      EL           G      
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----------GA----- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEI 152
                V     DV   AD      FA  EFG +   +N AGT  G K L +      +  
Sbjct: 54  ----AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSF 109

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNM------DG-AGSGGSSTPLTA 200
            + V+ NL+G+    R A  VM         + G I N       DG  G         A
Sbjct: 110 ARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQ--------A 161

Query: 201 VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            Y ++K G+  L     +E  R  + V T +PG+  T ++  
Sbjct: 162 AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG 203

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 89.4 bits (222), Expect = 2e-20
 Identities = 61/248 (24%), Positives = 96/248 (38%), Gaps = 40/248 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVV----------ASRSSESVRMTVTELEENLKE 83
           R V++TG+  G+G+A A  F   G RVVV           +    + +  V E+      
Sbjct: 28  RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT----- 82

Query: 84  GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 143
              AAGG         +      +V +      L   AV  FG +D+ +NNAG  +  + 
Sbjct: 83  ---AAGG---------EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRD-RM 129

Query: 144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIFNMD-GAGSGGSSTP 197
           +   + EE + +++ +L G     R A    R          G I N   GAG  GS   
Sbjct: 130 IANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS--V 187

Query: 198 LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV--LTDLLLSGSTIQNKQMFNII 255
               Y + K G+  L      E  R  V V+  +P     +T+ + +       Q F+ +
Sbjct: 188 GQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETVFAEMMATQDQDFDAM 247

Query: 256 CELPETVA 263
              PE V+
Sbjct: 248 --APENVS 253

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 87.7 bits (218), Expect = 7e-20
 Identities = 46/232 (19%), Positives = 72/232 (31%), Gaps = 45/232 (19%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVA------------SRSSESVRMTVTELEENLKE 83
           V++TG  RG G++ A +    G  +++               +S  +     E+E     
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE----- 67

Query: 84  GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP 143
                G          K      DV + A V +    AV EFG +D+ + NAG       
Sbjct: 68  ---KTGR---------KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGI---CPL 112

Query: 144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM----------DGAGSGG 193
                 +        + VG I     A+  +     G  I                G+GG
Sbjct: 113 GAHLPVQAFADAFDVDFVGVINTVHAALPYLT---SGASIITTGSVAGLIAAAQPPGAGG 169

Query: 194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
              P  A Y   K  +      L  +     +  +   P  V TD+L S   
Sbjct: 170 PQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM 221

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 86.8 bits (216), Expect = 7e-20
 Identities = 28/153 (18%), Positives = 68/153 (44%), Gaps = 26/153 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG++ G+G A+AR     G +V+++  + E ++     L++              
Sbjct: 15  KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD-------------- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                       C++    +   L    +++  ++DI + NAG        ++  +++ +
Sbjct: 61  ------NYTIEVCNLANKEECSNL----ISKTSNLDILVCNAGITSD-TLAIRMKDQDFD 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           +++  NL  + +  REA++ M  + + G I N+
Sbjct: 110 KVIDINLKANFILNREAIKKMIQK-RYGRIINI 141

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 86.5 bits (215), Expect = 1e-19
 Identities = 30/211 (14%), Positives = 57/211 (27%), Gaps = 29/211 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           + ITGS  G+G AL      +G  V+   R    +   ++                    
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPG----------------- 46

Query: 96  LVHAKVAGIACDVCEPADVQ-KLSNFA----VNEFGSIDIWINNAGTNKGFKPLL-QFTN 149
               +   +A  +     V   L   A          + + +N  G +     L    + 
Sbjct: 47  ---GRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSR 103

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
            +    V    + +       + ++      G                    Y  +K  +
Sbjct: 104 GQQPAAVIVGSIAATQPGAAELPMVEAM-LAGDEARA--IELAEQQGQTHLAYAGSKYAV 160

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
             L      +     V ++  +PG V T LL
Sbjct: 161 TCLARRNVVDWAGRGVRLNVVAPGAVETPLL 191

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 86.7 bits (215), Expect = 1e-19
 Identities = 45/251 (17%), Positives = 83/251 (33%), Gaps = 60/251 (23%)

Query: 31  AGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 89
           +G    ++TG  +G+G A+ R+   L    VV+ +R     +  V +L+           
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--------- 52

Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
                            D+ +   ++ L +F   E+G +D+ +NNAG            +
Sbjct: 53  --------GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFH 103

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQP----------KGGHIFNMDGAGSGGSSTPLT 199
            + E  + TN  G+     E + +++ Q                           S  +T
Sbjct: 104 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 163

Query: 200 ---------------------------AVYGSTKCGL----RQLQASLFKESKRSKVGVH 228
                                      + YG TK G+    R     L ++ K  K+ ++
Sbjct: 164 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLN 223

Query: 229 TASPGMVLTDL 239
              PG V TD+
Sbjct: 224 ACCPGWVRTDM 234

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 84.1 bits (209), Expect = 9e-19
 Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 22/219 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM-----TVTELEENLKEGMMAA 88
           +  +ITG  RG+G++ A     +G  + +  R   S  +     T  +L E +   +   
Sbjct: 11  KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL-VEKT 69

Query: 89  GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 148
           G          +      DV + A ++     A +  G IDI I NAG +     L +  
Sbjct: 70  GR---------RCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVE 119

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS--GGSSTPLTAVYGSTK 206
           + + ++++ TNL G+          M  +   G I  +    S  G S+    A Y S+K
Sbjct: 120 SAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTV---SSMLGHSANFAQASYVSSK 175

Query: 207 CGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST 245
            G+  L      +     + V+  +PG + T +  +   
Sbjct: 176 WGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFV 214

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 23/154 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TG+ RG+G  +A  F   G  VV                 E+LK      GG+  
Sbjct: 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGA---------AEDLKRVADKVGGT-- 262

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEI 152
                     +  DV     V K++       G  +DI +NNAG  +  K L     +  
Sbjct: 263 ---------ALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRD-KLLANMDEKRW 312

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
           + +++ NL+     T   +       +GG +  +
Sbjct: 313 DAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGL 345

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 77.3 bits (191), Expect = 1e-16
 Identities = 51/222 (22%), Positives = 77/222 (34%), Gaps = 53/222 (23%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+ ++TG   GLG+A A      G RVVV     E                         
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------------------ 38

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNE 150
                  +  +  DV    DV++    A  E   +   ++ AG     K L +      E
Sbjct: 39  -----EDLIYVEGDVTREEDVRRAVARAQ-EEAPLFAVVSAAGVGLAEKILGKEGPHGLE 92

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKG-----GHIFNM------DG-AGSGGSSTPL 198
              +++  NL+G+    R A   MR+ P       G I N       +G  G        
Sbjct: 93  SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQ------- 145

Query: 199 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
            A Y ++K G+  L     +E     + V T +PG+  T LL
Sbjct: 146 -AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLL 186

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 77.3 bits (191), Expect = 2e-16
 Identities = 56/224 (25%), Positives = 84/224 (37%), Gaps = 49/224 (21%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            V+TG   GLG A  +  L +G +VVV     E V   V +L +                
Sbjct: 12  AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADLGDR--------------- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQ---FTNEEI 152
                    A DV + A V    +      G++ I +N AGT    + L +   F+    
Sbjct: 54  -----ARFAAADVTDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAF 107

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQP-------KGGHIFNM------DG-AGSGGSSTPL 198
            +IV  NLVGS    R A   +           + G I N       DG  G        
Sbjct: 108 RKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQ------- 160

Query: 199 TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            A Y ++K G+  +   + ++    ++ V T +PG+  T LL S
Sbjct: 161 -AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS 203

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 74.2 bits (182), Expect = 5e-15
 Identities = 50/281 (17%), Positives = 84/281 (29%), Gaps = 97/281 (34%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  V+TG  +G+G  + ++   +G  VV+  R        V +L+ +             
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS------------- 59

Query: 94  KNLVHAKVAGIACDVCEPAD-VQKLSNFAVNEFGSIDIWINNAG---------------- 136
               H  V     DV +P   +  L++F    FG +DI +NNAG                
Sbjct: 60  ---NHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMIS 116

Query: 137 -------------TNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG--- 180
                             + L+  T E  E+ +  N  G    T   + +++        
Sbjct: 117 DIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIV 176

Query: 181 ---------GHIFNMDGAGSGGSSTPLT-----------------------------AVY 202
                     ++ N       G    LT                             A Y
Sbjct: 177 NVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAY 236

Query: 203 GSTKCGL----RQLQASLFKESKRSKVGVHTASPGMVLTDL 239
            ++K  L    R L   +       K  V+   PG+V T++
Sbjct: 237 TTSKACLNAYTRVLANKI------PKFQVNCVCPGLVKTEM 271

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 69.3 bits (170), Expect = 1e-13
 Identities = 30/232 (12%), Positives = 57/232 (24%), Gaps = 69/232 (29%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           +VI+G   G+G A  +    +G ++V                                  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD---------------------------- 35

Query: 96  LVHAKVAGIACDVCEPADVQK-LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQ 154
                 A +  D+      ++ +++        +D  +  AG     K L          
Sbjct: 36  ------AEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL--------GN 81

Query: 155 IVSTNLVGSILCTREAMRVMRDQPKG--------------------------GHIFNMDG 188
           +VS N  G+       +  ++   +                           G       
Sbjct: 82  VVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA 141

Query: 189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
                        Y  +K  L             + V ++T +PG   T LL
Sbjct: 142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL 193

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 65.6 bits (159), Expect = 1e-11
 Identities = 66/398 (16%), Positives = 106/398 (26%), Gaps = 146/398 (36%)

Query: 7   YSWLGGIIIGTMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS 66
           Y +L   I           +   +       +    R           L  D  V A  +
Sbjct: 91  YKFLMSPI-----------KTEQRQPSMMTRMYIEQRDR---------LYNDNQVFAKYN 130

Query: 67  SESVRMTVTELEENLKE----------GMMAAGGSSKKNLVHAKVAGIACDVCEPADVQK 116
              ++    +L + L E          G+    GS K  +        A DVC    VQ 
Sbjct: 131 VSRLQP-YLKLRQALLELRPAKNVLIDGV---LGSGKTWV--------ALDVCLSYKVQC 178

Query: 117 LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD 176
             +F +  F     W+N    N             +E +         L  +       D
Sbjct: 179 KMDFKI--F-----WLNLKNCNS--------PETVLEMLQK-------LLYQ------ID 210

Query: 177 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL 236
                   N        S+  L     S +  LR+L  S  K  +   +         VL
Sbjct: 211 P-------NWTSRSDHSSNIKLR--IHSIQAELRRLLKS--KPYENCLL---------VL 250

Query: 237 TDLLLSGSTIQNKQ---MFNIICE-LPET----VARTLVPRIRVVKGSGKAINYLTPPRI 288
            +       +QN +    FN+ C+ L  T    V   L                LTP   
Sbjct: 251 LN-------VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE- 302

Query: 289 LLALVTAWLRRGRWFDDQGR----------ALYAAE----ADRIRNW------------- 321
           + +L+  +L       D  R          ++ A           NW             
Sbjct: 303 VKSLLLKYL--DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE 360

Query: 322 --------AENRARFSFTDAMEMYTENTWVSVFSLSVV 351
                   AE R  F   D + ++  +  +    LS++
Sbjct: 361 SSLNVLEPAEYRKMF---DRLSVFPPSAHIPTILLSLI 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.9 bits (118), Expect = 1e-06
 Identities = 41/289 (14%), Positives = 82/289 (28%), Gaps = 76/289 (26%)

Query: 147 FTNEEIEQIV-------STNLVGSILCTREAMRVMR-----DQPKGGHIFNMDGAGSGGS 194
            + EEI+ I+        T  +   L +++   V +      +     + +         
Sbjct: 46  LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP 105

Query: 195 STPLTAVYGSTKCGL-------------R-----QLQASLFKESKRSKVGVHTASPGM-- 234
           S   T +Y   +  L             R     +L+ +L +      V +     G+  
Sbjct: 106 SMM-TRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLID----GVLG 160

Query: 235 ----VLTDLLLSGSTIQNKQMFNII------CELPETVARTLVPRIRVVKGSGKA-INYL 283
                +   +     +Q K  F I       C  PETV   L   +  +  +  +  ++ 
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 284 TPPRILLALVTAWLRR---GR------------W-------FDDQGRAL----YAAEADR 317
           +  ++ +  + A LRR    +                    F+   + L    +    D 
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF 280

Query: 318 IRNWAENRARFSFTDAMEMYTENTWVSVFSLSVVCAFIILSSTGSNTFP 366
           +   A      S        T +   S+    + C    L      T P
Sbjct: 281 LS--AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP 327

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 59.9 bits (146), Expect = 2e-10
 Identities = 31/125 (24%), Positives = 45/125 (36%), Gaps = 35/125 (28%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R VVITG+  GLG   ARE    G  V++A R +         +                
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--------------- 61

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG--------TNKGFKPLL 145
                 +V     D+ + + V++      +     D+ INNAG        T  GF+   
Sbjct: 62  -----GQVEVRELDLQDLSSVRR----FADGVSGADVLINNAGIMAVPYALTVDGFE--S 110

Query: 146 QF-TN 149
           Q  TN
Sbjct: 111 QIGTN 115

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 12/103 (11%), Positives = 23/103 (22%), Gaps = 25/103 (24%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+   T  +G   A      G  VV+  R  +  +     + +              
Sbjct: 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK-------------- 165

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG 136
                 KV   A +  + A   +                    
Sbjct: 166 ----RFKVNVTAAETADDASRAEA-------VKGAHFVFTAGA 197

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 22/87 (25%)

Query: 36  VVITGSTRGLGKALAREFLLS-GDR-VVVASRS---SESVRMTVTELEENLKEGMMAAGG 90
           V++TG T  LG  +AR  ++  G R +V+ SR    +      V +L         A G 
Sbjct: 533 VLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT--------AYG- 583

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKL 117
                   A+V+  ACDV +   + K+
Sbjct: 584 --------AEVSLQACDVADRETLAKV 602

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 40.4 bits (95), Expect = 8e-04
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 30  KAGPRNVVITGSTRGL-GKALAREFLLSGDRVVVASRSSESVR 71
              P  V ITGS  GL G+AL  +    G  V+   R      
Sbjct: 144 DGSPLTVAITGSR-GLVGRALTAQLQTGGHEVIQLVRKEPKPG 185

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	368
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.98
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.93
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.91
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.87
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.87
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.87
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.86
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.86
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.86
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.85
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.85
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.84
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.84
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.83
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.83
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.83
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.83
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.83
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.83
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.82
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.82
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.82
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.82
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.81
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.81
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.81
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.8
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.8
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.8
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.8
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.8
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.8
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.8
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.79
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.79
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.79
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.79
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.79
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.78
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.78
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.78
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.78
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.78
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.78
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.78
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.77
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.77
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.76
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.76
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.75
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.75
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.74
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.74
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.73
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.72
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.71
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.71
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.7
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.7
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.69
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.69
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.68
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.67
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.64
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.64
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.64
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.63
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.62
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.62
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.61
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.61
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.6
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.59
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.58
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.56
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.52
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.5
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.49
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.48
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.48
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.42
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.42
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.41
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.39
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.3
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.07
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.04
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.94
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.79
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.74
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.74
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.65
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.6
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.57
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.55
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.52
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.51
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.4
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.34
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.3
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.27
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.27
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.25
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.25
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.24
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.23
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.22
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.21
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.2
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.19
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.15
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.1
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.08
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.98
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.97
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.92
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.91
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.91
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.85
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.84
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.81
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.79
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.79
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.76
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.73
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.72
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.7
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.68
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.68
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.66
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.61
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.61
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.59
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.59
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.56
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.56
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.55
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.54
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.49
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.47
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.46
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.44
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.43
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.4
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.37
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.37
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.35
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.29
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.27
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.25
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.25
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.21
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.18
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.17
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.15
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.12
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.04
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.03
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.01
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.01
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.99
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.97
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.96
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.96
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.91
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.9
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.9
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.88
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.83
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.83
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.82
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.82
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.81
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.77
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.77
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.76
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.74
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.74
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.73
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.73
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.73
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.72
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.71
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.69
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.68
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.68
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.67
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.62
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.59
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.59
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.57
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.57
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.55
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	96.54
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.53
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.53
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.49
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.48
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.48
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.47
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.45
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.44
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.38
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.31
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.21
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.19
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.17
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.16
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.16
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.13
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.13
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.09
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.04
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.97
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.95
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.91
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.88
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.87
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.86
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.82
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.8
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.79
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.75
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.7
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.68
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	95.67
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.64
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.61
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	95.61
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.61
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.59
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.57
1lnq_A	336	MTHK channels, potassium channel related protein;	95.56
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.55
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.53
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.52
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.5
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.43
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.41
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	95.38
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.37
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	95.34
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.34
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.33
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.32
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.3
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.29
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.28
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.26
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.25
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.24
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.23
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.22
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.19
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.18
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.11
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	95.09
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	95.05
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	95.01
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	94.95
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	94.9
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	94.9
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.85
3l07_A	285	Bifunctional protein fold; structural genomics, ID	94.81

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.5e-54  Score=394.50  Aligned_cols=250  Identities=24%  Similarity=0.323  Sum_probs=223.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++|+
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~-----------------~g~~~~~~~~Dv   65 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG-----------------MGKEVLGVKADV   65 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence            578999999999999999999999999999999999999999999999876                 457899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++||+||+||||||+..+..++.+.+.|+|++++++|+.|+|+++|+++|+|+++ ++|+|||+||
T Consensus        66 t~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS  144 (254)
T 4fn4_A           66 SKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQ-GKGVIVNTAS  144 (254)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEec
Confidence            999999999999999999999999999987646789999999999999999999999999999999988 5899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.+...+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||.............      ...-...+++
T Consensus       145 ~-~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~------~~~~~~~~~~  217 (254)
T 4fn4_A          145 I-AGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMR------TLTKLMSLSS  217 (254)
T ss_dssp             G-GGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHH------HHHHHHTTCC
T ss_pred             h-hhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHH------HHHhcCCCCC
Confidence            8 67888999999999999999999999999999999999999999999987543322111110      0011123568


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+..|+|++..+.||+|+...++||+.+..||+|.
T Consensus       218 R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          218 RLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCcc
Confidence            89999999999999999999999999999999874

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.7e-54  Score=394.46  Aligned_cols=249  Identities=24%  Similarity=0.307  Sum_probs=225.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++||
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~-----------------~g~~~~~~~~D   66 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR-----------------KGYDAHGVAFD   66 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----------------TTCCEEECCCC
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEee
Confidence            4689999999999999999999999999999999999999999999998876                 45678999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.++||+||+||||||+.. ..++.+++.|+|++++++|+.|+|+++|+++|+|.+++++|+|||+|
T Consensus        67 v~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnis  145 (255)
T 4g81_D           67 VTDELAIEAAFSKLDAEGIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIG  145 (255)
T ss_dssp             TTCHHHHHHHHHHHHHTTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEe
Confidence            99999999999999999999999999999987 68999999999999999999999999999999998765689999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.|...+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+.......  ++.      ......+.++
T Consensus       146 S~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~------~~~~~~~~Pl  216 (255)
T 4g81_D          146 SL-TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQF------DSWVKSSTPS  216 (255)
T ss_dssp             CG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHH------HHHHHHHSTT
T ss_pred             eh-hhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHH------HHHHHhCCCC
Confidence            98 67888999999999999999999999999999999999999999999986432211  111      1223456788


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|++..+.||+|+...++||+.+..||+|.
T Consensus       217 ~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          217 QRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCCeE
Confidence            999999999999999999999999999999999985

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-52  Score=379.17  Aligned_cols=245  Identities=18%  Similarity=0.243  Sum_probs=212.6

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      |+++++|+||++|||||++|||+++|+.|+++|++|++++|+.+  ++..+++++                 .+.++..+
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~-----------------~g~~~~~~   61 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAK-----------------DGGNASAL   61 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHH-----------------TTCCEEEE
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHH-----------------hCCcEEEE
Confidence            34567999999999999999999999999999999999999864  345555554                 45688999


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +||++|+++++++++     +|+||+||||||+.. ..++.+++.++|++++++|+.|+|+++|+++|+|++++++|+||
T Consensus        62 ~~Dv~d~~~v~~~~~-----~g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IV  135 (247)
T 4hp8_A           62 LIDFADPLAAKDSFT-----DAGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVV  135 (247)
T ss_dssp             ECCTTSTTTTTTSST-----TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             EccCCCHHHHHHHHH-----hCCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEE
Confidence            999999999887663     589999999999987 68999999999999999999999999999999998875689999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      |+||. ++..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||........  ..      ......+
T Consensus       136 nisS~-~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~--~~------~~~~~~~  206 (247)
T 4hp8_A          136 NIASL-LSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA--AR------NKAILER  206 (247)
T ss_dssp             EECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH--HH------HHHHHTT
T ss_pred             EEech-hhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH--HH------HHHHHhC
Confidence            99998 678889999999999999999999999999999999999999999999874322110  00      1122345


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++|+..|+|++..+.||+|+...++||+.+.+||+|.
T Consensus       207 ~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          207 IPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             CTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcccc
Confidence            678999999999999999999999999999999999985

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1.2e-51  Score=378.95  Aligned_cols=245  Identities=23%  Similarity=0.361  Sum_probs=212.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++..+++|++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~--------------------g~~~~~~~~Dv~   85 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI--------------------GGGAVGIQADSA   85 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTCEEEECCTT
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------------------CCCeEEEEecCC
Confidence            589999999999999999999999999999999999999988877665                    246778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+|+++|+++|+|++   +|+||+++|.
T Consensus        86 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~  161 (273)
T 4fgs_A           86 NLAELDRLYEKVKAEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGST  161 (273)
T ss_dssp             CHHHHHHHHHHHHHHHSCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeeh
Confidence            999999999999999999999999999977 789999999999999999999999999999999964   5899999988


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.|...+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+...............   ..+...+.|++|
T Consensus       162 -~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~---~~~~~~~~PlgR  237 (273)
T 4fgs_A          162 -AGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGL---LNALAAQVPMGR  237 (273)
T ss_dssp             -GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHH---HHHHHHHSTTSS
T ss_pred             -hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHH---HHHHHhcCCCCC
Confidence             6788899999999999999999999999999999999999999999998765332211111111   123345678899


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +..|+|++..+.||+|+...++||+.+..||++
T Consensus       238 ~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~  270 (273)
T 4fgs_A          238 VGRAEEVAAAALFLASDDSSFVTGAELFVDGGS  270 (273)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CcCHHHHHHHHHHHhCchhcCccCCeEeECcCh
Confidence            999999999999999999999999999999986

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=6.8e-51  Score=371.99  Aligned_cols=248  Identities=17%  Similarity=0.206  Sum_probs=209.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++.+                 .+.++.+++||+
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~-----------------~~~~~~~~~~Dv   64 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQ-----------------RQPRATYLPVEL   64 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHH-----------------HCTTCEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHh-----------------cCCCEEEEEeec
Confidence            6899999999999999999999999999999999999987754 3444444                 245788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++||+||+||||||+..  ....+.+.|+|++.+++|+.|+|+++|+++|+|+++  +|+|||+||
T Consensus        65 ~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS  140 (258)
T 4gkb_A           65 QDDAQCRDAVAQTIATFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISS  140 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEee
Confidence            9999999999999999999999999999865  334578999999999999999999999999999764  599999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh-
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV-  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~-  267 (368)
                      . ++..+.|...+|++||+|+.+|+|+|+.|++++|||||+|+||+|+||+............    ....+...+.++ 
T Consensus       141 ~-~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~----~~~~~~~~~~plg  215 (258)
T 4gkb_A          141 K-TAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPE----AKLAEIAAKVPLG  215 (258)
T ss_dssp             T-HHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC---------------CHHHHHHTTCTTT
T ss_pred             h-hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChH----HHHHHHHhcCCCC
Confidence            8 6778889999999999999999999999999999999999999999999764322111000    001223334556 


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|++..+.||+|+...++||+.+..||+|.
T Consensus       216 ~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          216 RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCccCCeEEECCCcc
Confidence            588999999999999999999999999999999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.2e-50  Score=365.16  Aligned_cols=232  Identities=21%  Similarity=0.321  Sum_probs=200.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++.                       .+.++..+++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~-----------------------~~~~~~~~~~Dv~~   65 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP-----------------------RHPRIRREELDITD   65 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC-----------------------CCTTEEEEECCTTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh-----------------------hcCCeEEEEecCCC
Confidence            6899999999999999999999999999999999998764321                       23578889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++    ++|+||+||||||+.   .++.+++.++|++++++|+.|+|+++|+++|+|+++  +|+|||+||. 
T Consensus        66 ~~~v~~~~~----~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~-  135 (242)
T 4b79_A           66 SQRLQRLFE----ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASM-  135 (242)
T ss_dssp             HHHHHHHHH----HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCG-
T ss_pred             HHHHHHHHH----hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeec-
Confidence            999987764    579999999999985   456789999999999999999999999999999764  6999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      ++..+.++..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||........  +.      ..+...+.+++|+
T Consensus       136 ~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~--~~------~~~~~~~~PlgR~  207 (242)
T 4b79_A          136 YSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADV--EA------TRRIMQRTPLARW  207 (242)
T ss_dssp             GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCH--HH------HHHHHHTCTTCSC
T ss_pred             cccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCH--HH------HHHHHhcCCCCCC
Confidence            678889999999999999999999999999999999999999999999875432211  11      1233456788999


Q ss_pred             hhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          271 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..|+|++..+.||+|+...++||+.+.+||+|.
T Consensus       208 g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG~l  240 (242)
T 4b79_A          208 GEAPEVASAAAFLCGPGASFVTGAVLAVDGGYL  240 (242)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cCHHHHHHHHHHHhCchhcCccCceEEECccHh
Confidence            999999999999999999999999999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=3.6e-50  Score=368.22  Aligned_cols=250  Identities=17%  Similarity=0.193  Sum_probs=209.2

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      +++.|+|+||++|||||++|||+++|++|+++|++|++++|+.++.                           ..+..++
T Consensus         3 m~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------------------------~~~~~~~   55 (261)
T 4h15_A            3 MIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG---------------------------LPEELFV   55 (261)
T ss_dssp             CCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------------------SCTTTEE
T ss_pred             chhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC---------------------------CCcEEEE
Confidence            4566899999999999999999999999999999999999975421                           1233468


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      ++|++|+++++++++++.++||+||+||||||+... ..++.+++.|+|++.+++|+.|+++++|+++|+|+++ ++|+|
T Consensus        56 ~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~I  134 (261)
T 4h15_A           56 EADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVAR-GSGVV  134 (261)
T ss_dssp             ECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             EcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhc-CCceE
Confidence            999999999999999999999999999999998542 3578999999999999999999999999999999987 58999


Q ss_pred             EEEcCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC----C
Q 017635          184 FNMDGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----L  258 (368)
Q Consensus       184 v~isS~~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~----~  258 (368)
                      |++||. ++..+.| +...|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........+........    .
T Consensus       135 v~isS~-~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~  213 (261)
T 4h15_A          135 VHVTSI-QRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKII  213 (261)
T ss_dssp             EEECCG-GGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred             EEEEeh-hhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHH
Confidence            999998 5666665 578999999999999999999999999999999999999998643221111110000000    0


Q ss_pred             HHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          259 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+..++.+++|+..|+|+++.+.||+|+...++||+.+..||+|.
T Consensus       214 ~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          214 MDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcCc
Confidence            112234578899999999999999999999999999999999984

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.8e-49  Score=357.51  Aligned_cols=231  Identities=22%  Similarity=0.276  Sum_probs=206.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+||||||++|||+++|++|+++|++|++++|+++++++..++                     ..++.+++||++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---------------------~~~~~~~~~Dv~~~~   60 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---------------------RPNLFYFHGDVADPL   60 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---------------------CTTEEEEECCTTSHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---------------------cCCEEEEEecCCCHH
Confidence            38999999999999999999999999999999998776544322                     246788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.++||+||+||||||+.. ..++.+.+.|+|++++++|+.|+|+++|+++|+|+++  +|+|||+||. ++
T Consensus        61 ~v~~~v~~~~~~~g~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~-~~  136 (247)
T 3ged_A           61 TLKKFVEYAMEKLQRIDVLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIAST-RA  136 (247)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCG-GG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeec-cc
Confidence            999999999999999999999999987 6899999999999999999999999999999999876  5999999998 67


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.|...+|++||+|+.+|+|+|+.|+++ |||||+|+||+|+|++..+.              ..+...+.+++|+..
T Consensus       137 ~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~--------------~~~~~~~~Pl~R~g~  201 (247)
T 3ged_A          137 FQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAPGWINVTEQQEF--------------TQEDCAAIPAGKVGT  201 (247)
T ss_dssp             TSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEEECSBCCCC---C--------------CHHHHHTSTTSSCBC
T ss_pred             ccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEecCcCCCCCcHHH--------------HHHHHhcCCCCCCcC
Confidence            888999999999999999999999999997 99999999999999975321              234556678999999


Q ss_pred             cccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          273 VKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      |+|++.++.||+++  .++||+.+.+||++...
T Consensus       202 pediA~~v~fL~s~--~~iTG~~i~VDGG~s~r  232 (247)
T 3ged_A          202 PKDISNMVLFLCQQ--DFITGETIIVDGGMSKR  232 (247)
T ss_dssp             HHHHHHHHHHHHHC--SSCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHHHHHhC--CCCCCCeEEECcCHHHh
Confidence            99999999999975  48999999999998653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=3e-48  Score=355.47  Aligned_cols=247  Identities=17%  Similarity=0.092  Sum_probs=216.5

Q ss_pred             cCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      |+|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++++.                .+.++.+++|
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~   65 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL----------------NQPEAHLYQI   65 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG----------------TCSSCEEEEC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------CCCcEEEEEc
Confidence            689999999999865  9999999999999999999999999888877776542                2357889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|+..+++|+.+++.+++.++|+|+   ++|+|
T Consensus        66 Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~---~~G~I  142 (256)
T 4fs3_A           66 DVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP---EGGSI  142 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT---TCEEE
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCCEE
Confidence            9999999999999999999999999999998642   24567889999999999999999999999988765   46999


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.|+...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.......  +..      ..+...
T Consensus       143 VnisS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~------~~~~~~  213 (256)
T 4fs3_A          143 VATTYL-GGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGF--NTI------LKEIKE  213 (256)
T ss_dssp             EEEECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH--HHH------HHHHHH
T ss_pred             EEEecc-ccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCC--HHH------HHHHHh
Confidence            999998 67888999999999999999999999999999999999999999999987543211  111      123445


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +.+++|+..|+|++..+.||+||...++||+.+..||+|.
T Consensus       214 ~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          214 RAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcCHH
Confidence            6789999999999999999999999999999999999984

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.3e-46  Score=341.91  Aligned_cols=261  Identities=22%  Similarity=0.316  Sum_probs=222.0

Q ss_pred             HHhccccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           17 TMVGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        17 ~~~~~~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      .|..........+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                
T Consensus         4 ~m~~~~~~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------   67 (266)
T 4egf_A            4 SMTTTDDRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ----------------   67 (266)
T ss_dssp             ------CCBCGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------
T ss_pred             cccccchhcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------
Confidence            3444444555667899999999999999999999999999999999999999999888888653                


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++
T Consensus        68 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~  146 (266)
T 4egf_A           68 FGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVA  146 (266)
T ss_dssp             HCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence            2357899999999999999999999999999999999999987 578889999999999999999999999999999998


Q ss_pred             CCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhc
Q 017635          177 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  256 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  256 (368)
                      ++.+|+||++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...     
T Consensus       147 ~~~~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~-----  218 (266)
T 4egf_A          147 AGEGGAIITVASA-AALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD--EAK-----  218 (266)
T ss_dssp             HTSCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS--HHH-----
T ss_pred             cCCCeEEEEEcch-hhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC--hHH-----
Confidence            7557899999998 67788889999999999999999999999999999999999999999986432110  000     


Q ss_pred             CCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          257 ELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       257 ~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                       ......+.+++++..|+|++..+.||+++...+++|+.+..||++.
T Consensus       219 -~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          219 -SAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             -HHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -HHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCcc
Confidence             0122234556778889999999999999999899999998888763

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.7e-45  Score=338.84  Aligned_cols=257  Identities=18%  Similarity=0.250  Sum_probs=219.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D   67 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRF---------------PGARLFASVCD   67 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---------------TTCCEEEEECC
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc---------------CCceEEEEeCC
Confidence            467899999999999999999999999999999999999999998888886632               23458899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++|
T Consensus        68 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~is  145 (265)
T 3lf2_A           68 VLDALQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESR-ADAAIVCVN  145 (265)
T ss_dssp             TTCHHHHHHHHHHHHHHHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-TTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CCeEEEEEC
Confidence            99999999999999999999999999999976 6888999999999999999999999999999999877 589999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH---
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR---  264 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~---  264 (368)
                      |. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.............. .....+...+   
T Consensus       146 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  223 (265)
T 3lf2_A          146 SL-LASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELD-WAQWTAQLARNKQ  223 (265)
T ss_dssp             EG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------C-HHHHHHHHHHHTT
T ss_pred             Cc-ccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccC-HHHHHHHHhhccC
Confidence            97 677888999999999999999999999999999999999999999999864322110000000 0000122223   


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|++..+.||+++...+++|..+..||++.
T Consensus       224 ~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          224 IPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred             CCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence            567788899999999999999999999999999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=2.3e-45  Score=336.24  Aligned_cols=249  Identities=23%  Similarity=0.350  Sum_probs=216.6

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      ....+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++
T Consensus         4 ~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~   66 (256)
T 3gaf_A            4 YESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ-----------------AGGKAIGL   66 (256)
T ss_dssp             --CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH-----------------TTCCEEEE
T ss_pred             CcCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEE
Confidence            4456789999999999999999999999999999999999999999888888865                 34678999


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|++|+++++++++++.+++|++|+||||||+.. ..++ +.+.++|++.+++|+.|+++++++++|+|+++ +.|+||
T Consensus        67 ~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv  143 (256)
T 3gaf_A           67 ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAIL  143 (256)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred             ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            99999999999999999999999999999999976 4666 89999999999999999999999999999987 579999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......   ....      ......
T Consensus       144 ~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~------~~~~~~  213 (256)
T 3gaf_A          144 NISSM-AGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT---PEIE------RAMLKH  213 (256)
T ss_dssp             EECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC---HHHH------HHHHTT
T ss_pred             EEcCH-HHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC---HHHH------HHHHhc
Confidence            99997 6778888999999999999999999999999999999999999999998643211   0000      111223


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|++..+.||+++...+++|..+..||++.
T Consensus       214 ~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          214 TPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCcc
Confidence            456778888999999999999998889999998888764

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.5e-45  Score=337.71  Aligned_cols=257  Identities=19%  Similarity=0.274  Sum_probs=212.0

Q ss_pred             ccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           24 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        24 ~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      .+...|++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.+
T Consensus        19 ~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~   81 (283)
T 3v8b_A           19 YFQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG-----------------AGGQAIA   81 (283)
T ss_dssp             --------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT-----------------TTCCEEE
T ss_pred             hhhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEE
Confidence            34455788999999999999999999999999999999999999998888887754                 3467899


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +++|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+|
T Consensus        82 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~I  160 (283)
T 3v8b_A           82 LEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAI  160 (283)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             EEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceE
Confidence            99999999999999999999999999999999986545788999999999999999999999999999999887 57999


Q ss_pred             EEEcCCCCCCC--CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          184 FNMDGAGSGGS--STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       184 v~isS~~~~~~--~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      |++||. ++..  +.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++............ ......  .
T Consensus       161 v~isS~-~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~--~  236 (283)
T 3v8b_A          161 VVVSSI-NGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEET-AIPVEW--P  236 (283)
T ss_dssp             EEECCS-BTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHH-SCCCBC--T
T ss_pred             EEEcCh-hhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhh-hhhhhh--h
Confidence            999997 4555  668889999999999999999999999999999999999999998754321111100 000000  0


Q ss_pred             HHHHhh--hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 VARTLV--PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 ~a~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ....++  +++..|+|++..+.||+++...+++|+.+..||++
T Consensus       237 ~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          237 KGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             TCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             hhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            112234  67778899999999999999989999999988876

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.3e-45  Score=334.72  Aligned_cols=243  Identities=24%  Similarity=0.371  Sum_probs=212.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .+..++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~   62 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--------------------DNGKGMAL   62 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------GGEEEEEC
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------ccceEEEE
Confidence            3467899999999999999999999999999999999999988877766653                    24678999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++
T Consensus        63 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~i  140 (248)
T 3op4_A           63 NVTNPESIEAVLKAITDEFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINV  140 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            999999999999999999999999999999987 5788899999999999999999999999999999877 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........          ........+
T Consensus       141 sS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~~p  209 (248)
T 3op4_A          141 GSV-VGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQ----------RTATLAQVP  209 (248)
T ss_dssp             CCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHH----------HHHHHHTCT
T ss_pred             cch-hhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHH----------HHHHHhcCC
Confidence            987 566778899999999999999999999999999999999999999999875432110          112233455


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++..|+|+++.+.||+++...+++|..+..||++
T Consensus       210 ~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          210 AGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            677788899999999999999888899999888876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=7.2e-45  Score=335.79  Aligned_cols=249  Identities=22%  Similarity=0.296  Sum_probs=219.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++++
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   82 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN-----------------VGHDAEAVAF   82 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH-----------------TTCCEEECCC
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEc
Confidence            34678999999999999999999999999999999999999999988888865                 3467889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++
T Consensus        83 Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~i  160 (271)
T 4ibo_A           83 DVTSESEIIEAFARLDEQGIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNI  160 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999976 6788899999999999999999999999999999987 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ...      ........+
T Consensus       161 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~~~p  231 (271)
T 4ibo_A          161 GSL-TSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEF------DAWVKARTP  231 (271)
T ss_dssp             CCG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHH------HHHHHHHST
T ss_pred             ccH-HhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHH------HHHHHhcCC
Confidence            997 57788889999999999999999999999999999999999999999986432110  000      112234566


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++++..|+|++..+.||+++...+++|..+..||++.
T Consensus       232 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          232 AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCee
Confidence            7888899999999999999999899999998888763

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.4e-44  Score=334.65  Aligned_cols=251  Identities=25%  Similarity=0.361  Sum_probs=217.8

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      |...+.+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.
T Consensus        22 m~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~   84 (276)
T 3r1i_A           22 MSVLDLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG-----------------VGGKAL   84 (276)
T ss_dssp             -CGGGGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-----------------TTCCCE
T ss_pred             cccccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEE
Confidence            444566789999999999999999999999999999999999999999888888865                 346788


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      ++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++++.+|+
T Consensus        85 ~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~  163 (276)
T 3r1i_A           85 PIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGT  163 (276)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcE
Confidence            9999999999999999999999999999999999987 678889999999999999999999999999999998755699


Q ss_pred             EEEEcCCCCCCCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH
Q 017635          183 IFNMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  260 (368)
Q Consensus       183 Iv~isS~~~~~~~~--~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  260 (368)
                      ||++||.. +..+.  +....|++||+|+++|+++++.|++++||+||+|+||+|+|++......     .      ...
T Consensus       164 iv~isS~~-~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----~------~~~  231 (276)
T 3r1i_A          164 IITTASMS-GHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-----Y------HAL  231 (276)
T ss_dssp             EEEECCGG-GTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-----G------HHH
T ss_pred             EEEECchH-hcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-----H------HHH
Confidence            99999873 43332  3678999999999999999999999999999999999999998753211     0      011


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .....+++++..|+|++..+.||+++...+++|+.+..||++.
T Consensus       232 ~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          232 WEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             HGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCcc
Confidence            1223456788899999999999999999999999999998874

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.7e-45  Score=333.92  Aligned_cols=249  Identities=24%  Similarity=0.327  Sum_probs=216.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.                ...++.++++|
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D   68 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL----------------GSGKVIGVQTD   68 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------SSSCEEEEECC
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------CCCcEEEEEcC
Confidence            35789999999999999999999999999999999999999998888887642                22578999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++|
T Consensus        69 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~is  146 (262)
T 3pk0_A           69 VSDRAQCDALAGRAVEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIAS-GSGRVVLTS  146 (262)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-SSCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            99999999999999999999999999999976 6888999999999999999999999999999999987 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |..+...+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......    ...      .......++
T Consensus       147 S~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~------~~~~~~~p~  216 (262)
T 3pk0_A          147 SITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGE----EYI------ASMARSIPA  216 (262)
T ss_dssp             CSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCH----HHH------HHHHTTSTT
T ss_pred             chhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCH----HHH------HHHHhcCCC
Confidence            9843347788899999999999999999999999999999999999999998643211    110      111223456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +++..|+|+++.+.||+++...+++|..+..||++.-
T Consensus       217 ~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          217 GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCeec
Confidence            7778889999999999999998999999999887743

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-44  Score=334.86  Aligned_cols=252  Identities=22%  Similarity=0.232  Sum_probs=215.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++.+|+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv   66 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG-----------------GGGEAAALAGDV   66 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT-----------------TTCCEEECCCCT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEECCC
Confidence            357899999999999999999999999999999999999998888777743                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        67 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  145 (280)
T 3tox_A           67 GDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAAL-GGGSLTFTSS  145 (280)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcC
Confidence            999999999999999999999999999987546788899999999999999999999999999999987 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      ..+...+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.............      .......+++
T Consensus       146 ~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~------~~~~~~~p~~  219 (280)
T 3tox_A          146 FVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETR------GFVEGLHALK  219 (280)
T ss_dssp             SBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHH------HHHHTTSTTS
T ss_pred             hhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHH------HHHhccCccC
Confidence            7433367888999999999999999999999999999999999999999986432111111110      0111223456


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ++..|+|++..+.||+++...+++|..+..||++..
T Consensus       220 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~~  255 (280)
T 3tox_A          220 RIARPEEIAEAALYLASDGASFVTGAALLADGGASV  255 (280)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCcCHHHHHHHHHHHhCccccCCcCcEEEECCCccc
Confidence            778899999999999999998999999999998754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-44  Score=335.10  Aligned_cols=256  Identities=20%  Similarity=0.200  Sum_probs=220.2

Q ss_pred             hccccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 017635           19 VGANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVH   98 (368)
Q Consensus        19 ~~~~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   98 (368)
                      ...++.++..+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+
T Consensus        19 ~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~   81 (275)
T 4imr_A           19 YFQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA-----------------SG   81 (275)
T ss_dssp             CSCTTSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH-----------------TT
T ss_pred             ccccccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cC
Confidence            3445556666789999999999999999999999999999999999999998888888765                 34


Q ss_pred             ceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 017635           99 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  178 (368)
Q Consensus        99 ~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  178 (368)
                      .++.++.+|++|.++++++++++.+. |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ 
T Consensus        82 ~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-  158 (275)
T 4imr_A           82 GTAQELAGDLSEAGAGTDLIERAEAI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-  158 (275)
T ss_dssp             CCEEEEECCTTSTTHHHHHHHHHHHH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             CeEEEEEecCCCHHHHHHHHHHHHHh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-
Confidence            67899999999999999999999887 99999999999876 5788899999999999999999999999999999887 


Q ss_pred             CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCC
Q 017635          179 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       179 ~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      +.|+||++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++...........       .
T Consensus       159 ~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-------~  230 (275)
T 4imr_A          159 KWGRVVSIGSI-NQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEG-------W  230 (275)
T ss_dssp             TCEEEEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHH-------H
T ss_pred             CCcEEEEECCH-HhCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHH-------H
Confidence            57999999997 566677788889999999999999999999999999999999999999864321100000       1


Q ss_pred             HHHHHHH-hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          259 PETVART-LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       259 pe~~a~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+..... +++++..|+|++..+.||+++...+++|..+..||+|
T Consensus       231 ~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          231 DEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             HHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCCC
Confidence            1222333 6778889999999999999999989999999888875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.3e-44  Score=328.99  Aligned_cols=246  Identities=22%  Similarity=0.345  Sum_probs=216.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .++|++|||||++|||+++|++|+++|++|+++ +|+.+++++..+++++                 .+.++.++++|++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   64 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK-----------------LGVKVLVVKANVG   64 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT-----------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            368999999999999999999999999999997 8999888888877754                 3467899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~  142 (258)
T 3oid_A           65 QPAKIKEMFQQIDETFGRLDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKN-GGGHIVSISSL  142 (258)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEEEEG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECch
Confidence            999999999999999999999999999876 6788899999999999999999999999999999987 57999999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ........++++
T Consensus       143 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~~~p~~r  213 (258)
T 3oid_A          143 -GSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNR--EDL------LEDARQNTPAGR  213 (258)
T ss_dssp             -GGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTH--HHH------HHHHHHHCTTSS
T ss_pred             -hhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccC--HHH------HHHHHhcCCCCC
Confidence             57788899999999999999999999999999999999999999999987543211  111      122234456778


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +..|+|++..+.||+++...+++|..+..||++..
T Consensus       214 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~~~  248 (258)
T 3oid_A          214 MVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGRSL  248 (258)
T ss_dssp             CBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTGGG
T ss_pred             CcCHHHHHHHHHHHhCcccCCccCCEEEECCCccC
Confidence            88999999999999999998999999999998754

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=1.9e-44  Score=328.49  Aligned_cols=243  Identities=20%  Similarity=0.291  Sum_probs=212.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   61 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI--------------------GKKARAIAADI   61 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEECCCCT
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEcCC
Confidence            3578999999999999999999999999999999999998887766654                    24678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++++.|+||++||
T Consensus        62 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  140 (247)
T 3rwb_A           62 SDPGSVKALFAEIQALTGGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIAS  140 (247)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence            9999999999999999999999999999986 678899999999999999999999999999999998745799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH-Hhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR-TLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~-~~~  267 (368)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ...... .++
T Consensus       141 ~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----------~~~~~~~~~~  209 (247)
T 3rwb_A          141 N-TFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEA----------FGFVEMLQAM  209 (247)
T ss_dssp             T-HHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGG----------HHHHHHHSSS
T ss_pred             h-hhccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHH----------HHHHhccccc
Confidence            7 5667788999999999999999999999999999999999999999998754321111          111112 456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++...|+++++.+.||+++...+++|..+..||++.
T Consensus       210 ~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          210 KGKGQPEHIADVVSFLASDDARWITGQTLNVDAGMV  245 (247)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            677788999999999999999899999999988864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2e-44  Score=333.73  Aligned_cols=253  Identities=18%  Similarity=0.239  Sum_probs=210.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------ChHHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-------------SSESVRMTVTELEENLKEGMMAAGGSSKKN   95 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   95 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|             +.+++++..+++..                
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   70 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEA----------------   70 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHH----------------
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----------------
Confidence            3678999999999999999999999999999999998             66777777666654                


Q ss_pred             ccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 017635           96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  175 (368)
Q Consensus        96 ~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  175 (368)
                       .+.++.++.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+
T Consensus        71 -~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~  148 (277)
T 3tsc_A           71 -ANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRII  148 (277)
T ss_dssp             -TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             -cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence             3467899999999999999999999999999999999999987 57888999999999999999999999999999999


Q ss_pred             cCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          176 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       176 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                      +++++|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......   ......
T Consensus       149 ~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~---~~~~~~  224 (277)
T 3tsc_A          149 EGGRGGSIILISSA-AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVT---AVGQAM  224 (277)
T ss_dssp             HHTSCEEEEEECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHH---HHHHHH
T ss_pred             hcCCCCEEEEEccH-hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhh---hhhhcc
Confidence            87557999999997 67788899999999999999999999999999999999999999999986431100   000000


Q ss_pred             cCCHH---HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          256 CELPE---TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       256 ~~~pe---~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...++   .....+-.++..|+|++..+.||+++...+++|..+..||++.
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence            00000   0000111245678888889999999999899999998888763

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.2e-43  Score=329.85  Aligned_cols=255  Identities=18%  Similarity=0.230  Sum_probs=212.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------------hHHHHHHHHHHHHHhhhhhhhcCCCC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS----------------SESVRMTVTELEENLKEGMMAAGGSS   92 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~----------------~~~~~~~~~~l~~~~~~~~~~~~~~~   92 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+                .+++++..+++..             
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   73 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG-------------   73 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHT-------------
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhh-------------
Confidence            36789999999999999999999999999999999987                6666666665543             


Q ss_pred             cccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHH
Q 017635           93 KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR  172 (368)
Q Consensus        93 ~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp  172 (368)
                          .+.++.++++|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.|+++++++++|
T Consensus        74 ----~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~  149 (286)
T 3uve_A           74 ----HNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP  149 (286)
T ss_dssp             ----TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ----cCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence                3467899999999999999999999999999999999999876334588899999999999999999999999999


Q ss_pred             HHHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhh
Q 017635          173 VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF  252 (368)
Q Consensus       173 ~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~  252 (368)
                      +|++++++|+||++||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ..+.
T Consensus       150 ~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~  226 (286)
T 3uve_A          150 HMIAGGRGGSIILTSSV-GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTF--KMFR  226 (286)
T ss_dssp             HHHHHTSCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHH--HHHC
T ss_pred             HHHhCCCCcEEEEECch-hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchh--hhcc
Confidence            99887557999999998 67788899999999999999999999999999999999999999999987532110  0000


Q ss_pred             -hhhcCCHHHHHHH--h----hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          253 -NIICELPETVART--L----VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       253 -~~~~~~pe~~a~~--~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                       ......++.....  .    -.++..|+|++.++.||+++...+++|+.+..||++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          227 PDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             TTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccc
Confidence             0011123333221  1    1456788999999999999999999999999988763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=3e-44  Score=329.07  Aligned_cols=248  Identities=23%  Similarity=0.302  Sum_probs=212.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++++|++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   65 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ-----------------FPGQILTVQMDVR   65 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-----------------STTCEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            57899999999999999999999999999999999999998888777643                 3457899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|.++++.|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  144 (257)
T 3imf_A           66 NTDDIQKMIEQIDEKFGRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT  144 (257)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECch
Confidence            999999999999999999999999999876 6788999999999999999999999999999999655468999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                       .+..+.++...|++||+|+++|+++++.|++ ++||+||+|+||+|+|++........ ...      ........+++
T Consensus       145 -~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~------~~~~~~~~p~~  216 (257)
T 3imf_A          145 -YAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS-EEM------AKRTIQSVPLG  216 (257)
T ss_dssp             -GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CC------SHHHHTTSTTC
T ss_pred             -hhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC-HHH------HHHHHhcCCCC
Confidence             5777888999999999999999999999997 77999999999999999764321100 000      12222334567


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++..|+|++..+.||+++...+++|..+..||++.
T Consensus       217 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  251 (257)
T 3imf_A          217 RLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQH  251 (257)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHcCchhcCccCCEEEECCCcc
Confidence            78889999999999999998888999998888764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-44  Score=332.76  Aligned_cols=249  Identities=20%  Similarity=0.267  Sum_probs=209.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-------------ChHHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-------------SSESVRMTVTELEENLKEGMMAAGGSSKKN   95 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   95 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|             +.+++++..+++.+                
T Consensus        11 ~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   74 (280)
T 3pgx_A           11 GSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVED----------------   74 (280)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHT----------------
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHh----------------
Confidence            4689999999999999999999999999999999998             67777777666654                


Q ss_pred             ccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 017635           96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMR  175 (368)
Q Consensus        96 ~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~  175 (368)
                       .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+
T Consensus        75 -~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~  152 (280)
T 3pgx_A           75 -QGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMI  152 (280)
T ss_dssp             -TTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             -cCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence             3467899999999999999999999999999999999999987 67888999999999999999999999999999998


Q ss_pred             cCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          176 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       176 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                      +++.+|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ..+..  
T Consensus       153 ~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~~~--  227 (280)
T 3pgx_A          153 EAGNGGSIVVVSSS-AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMM--EIFAR--  227 (280)
T ss_dssp             HHCSCEEEEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHH--HHHHH--
T ss_pred             hcCCCCEEEEEcch-hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhh--hhhhc--
Confidence            87457999999997 67788899999999999999999999999999999999999999999986431100  00000  


Q ss_pred             cCCHHH------HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          256 CELPET------VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       256 ~~~pe~------~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                        .++.      ....+. ++..|+|+++.+.||+++...+++|+.+..||++.
T Consensus       228 --~~~~~~~~~~~~~~~~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          228 --HPSFVHSFPPMPVQPN-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             --CGGGGGGSCCBTTBCS-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             --CchhhhhhhhcccCCC-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence              0000      001112 45577888888899999998888898888888763

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.9e-44  Score=329.83  Aligned_cols=251  Identities=22%  Similarity=0.339  Sum_probs=213.4

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ...|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.+++
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~   79 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI--------------------GSKAFGVR   79 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------------------CTTEEEEE
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEE
Confidence            3457889999999999999999999999999999999999998877766553                    24678899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        80 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~  157 (277)
T 4dqx_A           80 VDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRN-GGGSIIN  157 (277)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            9999999999999999999999999999999876 6788899999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......... .....   ........
T Consensus       158 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~-~~~~~---~~~~~~~~  232 (277)
T 4dqx_A          158 TTSY-TATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAK-DPAKL---RSDFNARA  232 (277)
T ss_dssp             ECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCS-CHHHH---HHHHHTTS
T ss_pred             ECch-hhCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhccccc-chhHH---HHHHHhcC
Confidence            9987 6778889999999999999999999999999999999999999999998432111000 00000   01122344


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++++..|++++..+.||+++...+++|..+..||++.
T Consensus       233 ~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  270 (277)
T 4dqx_A          233 VMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGSS  270 (277)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             cccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCchh
Confidence            56778889999999999999998889999999888874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=4.5e-44  Score=331.46  Aligned_cols=249  Identities=22%  Similarity=0.269  Sum_probs=216.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...                .+.++.++++|
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   85 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA----------------TGRRCLPLSMD   85 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEECC
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEcC
Confidence            34588999999999999999999999999999999999999988888887653                24578999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        86 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  163 (277)
T 4fc7_A           86 VRAPPAVMAAVDQALKEFGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRD-HGGVIVNIT  163 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            99999999999999999999999999999876 6788899999999999999999999999999999876 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++...........       ........++
T Consensus       164 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~-------~~~~~~~~p~  235 (277)
T 4fc7_A          164 AT-LGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQAS-------LSTKVTASPL  235 (277)
T ss_dssp             CS-HHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHH-------HHHHHHTSTT
T ss_pred             ch-hhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHH-------HHHHhccCCC
Confidence            87 566778889999999999999999999999999999999999999998643211100000       1222334567


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..|+|++..+.||+++...+++|..+..||++
T Consensus       236 ~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          236 QRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCc
Confidence            78889999999999999999989999999888876

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=1.6e-43  Score=331.37  Aligned_cols=254  Identities=20%  Similarity=0.231  Sum_probs=211.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHhhhhhhhcCCCCccccc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNLV   97 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+                 .
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~   87 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA-----------------L   87 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHH-----------------T
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHh-----------------c
Confidence            5789999999999999999999999999999999987            6777777777655                 3


Q ss_pred             CceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635           98 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus        98 ~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      +.++.++++|++|.++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|.++
T Consensus        88 ~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~  167 (299)
T 3t7c_A           88 GRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAG  167 (299)
T ss_dssp             TCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred             CCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999987633458899999999999999999999999999999887


Q ss_pred             CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhh-hhc
Q 017635          178 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN-IIC  256 (368)
Q Consensus       178 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~  256 (368)
                      +++|+||++||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ..+.. ...
T Consensus       168 ~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~  244 (299)
T 3t7c_A          168 KRGGSIVFTSSI-GGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTY--RMFRPDLEN  244 (299)
T ss_dssp             TSCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH--HHHCTTSSS
T ss_pred             CCCcEEEEECCh-hhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchh--hhhhhhhcc
Confidence            568999999997 67788899999999999999999999999999999999999999999987532110  00000 000


Q ss_pred             CCHHHH------HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          257 ELPETV------ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       257 ~~pe~~------a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...+..      ...+-.++..|+|++..+.||+++...+++|..+..||++.
T Consensus       245 ~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          245 PTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             CCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             chhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcc
Confidence            011111      00011455678899999999999999899999999888763

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=6.5e-44  Score=332.94  Aligned_cols=249  Identities=21%  Similarity=0.287  Sum_probs=216.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                ...++.++++|
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D   99 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL----------------GAGNVIGVRLD   99 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS----------------SSSCEEEEECC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh----------------CCCcEEEEEEe
Confidence            46789999999999999999999999999999999999999988888777541                12578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++|
T Consensus       100 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iV~is  177 (293)
T 3rih_A          100 VSDPGSCADAARTVVDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTAS-GRGRVILTS  177 (293)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-SSCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEe
Confidence            99999999999999999999999999999976 6788999999999999999999999999999999887 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |..+...+.++...|++||+|+++|+++++.|++++||+||+|+||+|.|++......    ...      .......++
T Consensus       178 S~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~----~~~------~~~~~~~p~  247 (293)
T 3rih_A          178 SITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGE----EYI------SGMARSIPM  247 (293)
T ss_dssp             CSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCH----HHH------HHHHTTSTT
T ss_pred             ChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccH----HHH------HHHHhcCCC
Confidence            9843347788899999999999999999999999999999999999999998643221    100      111223456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +++..|+|++..+.||+++...+++|..+..||++..
T Consensus       248 ~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          248 GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTC
T ss_pred             CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            7788899999999999999998999999999888754

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.5e-43  Score=328.00  Aligned_cols=249  Identities=22%  Similarity=0.329  Sum_probs=213.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   84 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--------------------GCGAAACRVDV   84 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--------------------CSSCEEEECCT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCcceEEEecC
Confidence            4688999999999999999999999999999999999998887766654                    24678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        85 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS  162 (277)
T 3gvc_A           85 SDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIER-GGGAIVNLSS  162 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            9999999999999999999999999999986 6788899999999999999999999999999999987 5899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........   ......+.....+++
T Consensus       163 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  238 (277)
T 3gvc_A          163 L-AGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGA---LGAGGARSMIARLQG  238 (277)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHS
T ss_pred             h-hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhh---HHHHhhhhhhhcccc
Confidence            7 677888999999999999999999999999999999999999999999864321100000   001112333356678


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++..|+|++..+.||+++...+++|+.+..||++.
T Consensus       239 r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  273 (277)
T 3gvc_A          239 RMAAPEEMAGIVVFLLSDDASMITGTTQIADGGTI  273 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHcCCccCCccCcEEEECCcch
Confidence            88899999999999999999899999999988864

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6e-44  Score=328.32  Aligned_cols=249  Identities=20%  Similarity=0.234  Sum_probs=215.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   70 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD-----------------TGRRALSVGTDIT   70 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            47899999999999999999999999999999999999999988888865                 3467899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|+++  +|+||++||.
T Consensus        71 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~  148 (264)
T 3ucx_A           71 DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSM  148 (264)
T ss_dssp             CHHHHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcc
Confidence            99999999999999999999999999986446788999999999999999999999999999999876  4899999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-----HH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----AR  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~  264 (368)
                       ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.........    ......+++.     ..
T Consensus       149 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  223 (264)
T 3ucx_A          149 -VVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQA----GKYGTSVEDIYNAAAAG  223 (264)
T ss_dssp             -GGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHH----HHTTCCHHHHHHHHHTT
T ss_pred             -hhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhh----hhcCCCHHHHHHHHhcc
Confidence             5778888999999999999999999999999999999999999999998643211100    0001112222     23


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..|+|++..+.||+++...+++|+.+..||++
T Consensus       224 ~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          224 SDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             SSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            45677888999999999999999888899998888875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=3.5e-44  Score=331.03  Aligned_cols=245  Identities=21%  Similarity=0.363  Sum_probs=213.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.+|+
T Consensus        24 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv   86 (270)
T 3ftp_A           24 KTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ-----------------AGLEGRGAVLNV   86 (270)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------HTCCCEEEECCT
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEEeC
Confidence            357899999999999999999999999999999999999999888888765                 245688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        87 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  164 (270)
T 3ftp_A           87 NDATAVDALVESTLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITS  164 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECc
Confidence            9999999999999999999999999999977 5788899999999999999999999999999999877 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......+++
T Consensus       165 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----------~~~~~~~p~~  233 (270)
T 3ftp_A          165 V-VGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQ----------TALKTQIPLG  233 (270)
T ss_dssp             H-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHH----------HHHHTTCTTC
T ss_pred             h-hhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHH----------HHHHhcCCCC
Confidence            7 5667788999999999999999999999999999999999999999998643211100          1111233456


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++..|+|+++.+.||+++...+++|..+..||++.
T Consensus       234 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          234 RLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCcc
Confidence            77788899999999999998888999888888763

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.2e-43  Score=329.16  Aligned_cols=254  Identities=19%  Similarity=0.258  Sum_probs=216.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++...              .+.++.++++|
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~D   71 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGA--------------NGGAIRYEPTD   71 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCC--------------SSCEEEEEECC
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCC--------------CCceEEEEeCC
Confidence            3578899999999999999999999999999999999999999888888765210              12378999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|.++ ++|+||++|
T Consensus        72 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~is  150 (281)
T 3svt_A           72 ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRG-GGGSFVGIS  150 (281)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEe
Confidence            9999999999999999999999999999985446788899999999999999999999999999999987 589999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ........++
T Consensus       151 S~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~--~~~------~~~~~~~~p~  221 (281)
T 3svt_A          151 SI-AASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES--AEL------SSDYAMCTPL  221 (281)
T ss_dssp             CH-HHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC--HHH------HHHHHHHCSS
T ss_pred             CH-HHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC--HHH------HHHHHhcCCC
Confidence            87 56677888899999999999999999999999999999999999999986432110  000      1122334566


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      +++..|+|++..+.||+++...+++|..+..||++...
T Consensus       222 ~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          222 PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGS
T ss_pred             CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcc
Confidence            78888999999999999999888899999888887543

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.6e-43  Score=325.37  Aligned_cols=244  Identities=20%  Similarity=0.309  Sum_probs=210.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+ .++++++.+++++                 .+.++.+++
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~-----------------~~~~~~~~~   87 (271)
T 3v2g_A           25 TSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQ-----------------AGGRAVAIR   87 (271)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            4467899999999999999999999999999999998665 5667777777655                 356788999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++   +|+||+
T Consensus        88 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~  163 (271)
T 3v2g_A           88 ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIIT  163 (271)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEE
Confidence            9999999999999999999999999999999976 688899999999999999999999999999999953   689999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||..+...+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......           ......+.
T Consensus       164 isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----------~~~~~~~~  232 (271)
T 3v2g_A          164 IGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDH-----------AEAQRERI  232 (271)
T ss_dssp             ECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSS-----------HHHHHHTC
T ss_pred             EeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchh-----------HHHHHhcC
Confidence            9987444555788999999999999999999999999999999999999999986532111           11222345


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++++..|+|++..+.||+++...+++|..+..||++
T Consensus       233 ~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          233 ATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            5677888899999999999999989999999888875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-43  Score=328.34  Aligned_cols=252  Identities=25%  Similarity=0.357  Sum_probs=207.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++| +.+++++..+++.+.                .+.++.++++|
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   84 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL----------------SSGTVLHHPAD   84 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT----------------CSSCEEEECCC
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc----------------cCCcEEEEeCC
Confidence            4678999999999999999999999999999999999 666777776666432                24678999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        85 v~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is  162 (281)
T 3v2h_A           85 MTKPSEIADMMAMVADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIA  162 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEC
Confidence            99999999999999999999999999999976 6788899999999999999999999999999999887 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH------
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET------  261 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~------  261 (368)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........... ..   ..+++      
T Consensus       163 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~-~~---~~~~~~~~~~~  237 (281)
T 3v2h_A          163 SA-HGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQART-RG---ITEEQVINEVM  237 (281)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------------------------------
T ss_pred             Cc-ccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhh-cC---CCHHHHHHHHH
Confidence            87 677888999999999999999999999999999999999999999999875432211100 00   01111      


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ....+++++..++|++..+.||+++...+++|..+..||+|.
T Consensus       238 ~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          238 LKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             --CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTGG
T ss_pred             HhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCcc
Confidence            123456778889999999999999999889999998888873

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=6e-44  Score=330.97  Aligned_cols=252  Identities=24%  Similarity=0.300  Sum_probs=211.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++.+|
T Consensus        19 ~~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~D   81 (279)
T 3sju_A           19 SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA-----------------AGHDVDGSSCD   81 (279)
T ss_dssp             ------CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTCCEEEEECC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEECC
Confidence            3456899999999999999999999999999999999999999888888764                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHH--HHHcCCCCcEEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMR--VMRDQPKGGHIFN  185 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp--~m~~~~~~g~Iv~  185 (368)
                      ++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|  .|+++ +.|+||+
T Consensus        82 v~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-~~g~iV~  159 (279)
T 3sju_A           82 VTSTDEVHAAVAAAVERFGPIGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREA-GWGRIVN  159 (279)
T ss_dssp             TTCHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHH-TCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhc-CCcEEEE
Confidence            99999999999999999999999999999976 57888999999999999999999999999999  57766 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH----
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET----  261 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~----  261 (368)
                      +||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........    .....+++    
T Consensus       160 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~  234 (279)
T 3sju_A          160 IAST-GGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYAR----HWGVTEQEVHER  234 (279)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCS----SSCCCHHHHHHH
T ss_pred             ECCh-hhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhh----cccCChHHHHHH
Confidence            9987 67788889999999999999999999999999999999999999999986432110000    00001111    


Q ss_pred             -HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          262 -VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       262 -~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                       ....+++++..|+|++..+.||+++...+++|..+..||++.
T Consensus       235 ~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          235 FNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTCC
T ss_pred             HHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence             122345677889999999999999999899999999988863

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.6e-43  Score=322.13  Aligned_cols=242  Identities=23%  Similarity=0.381  Sum_probs=209.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +.+|++|||||++|||+++|++|+++|++|++++| +.++++++.+++++                 .+.++.++++|++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   64 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA-----------------KGVDSFAIQANVA   64 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTSCEEEEECCTT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            46899999999999999999999999999999887 55777777777765                 3467889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        65 d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  142 (246)
T 3osu_A           65 DADEVKAMIKEVVSQFGSLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSV  142 (246)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcch
Confidence            999999999999999999999999999976 5788899999999999999999999999999999877 57999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......++++
T Consensus       143 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~----------~~~~~~~p~~r  211 (246)
T 3osu_A          143 -VGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELK----------EQMLTQIPLAR  211 (246)
T ss_dssp             -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHH----------HHHHTTCTTCS
T ss_pred             -hhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHH----------HHHHhcCCCCC
Confidence             5667788899999999999999999999999999999999999999998654321110          11122345677


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +..++|++..+.||+++...+++|..+..+|++
T Consensus       212 ~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          212 FGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            788899999999999999888888888888875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=9.8e-44  Score=327.31  Aligned_cols=243  Identities=21%  Similarity=0.315  Sum_probs=202.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D   81 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL--------------------GKDVFVFSAN   81 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CSSEEEEECC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceEEEEee
Confidence            35789999999999999999999999999999999999998877765543                    3468899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        82 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~is  159 (266)
T 3grp_A           82 LSDRKSIKQLAEVAEREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINIT  159 (266)
T ss_dssp             TTSHHHHHHHHHHHHHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEEC
Confidence            99999999999999999999999999999976 5788899999999999999999999999999999877 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......++
T Consensus       160 S~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~----------~~~~~~~p~  228 (266)
T 3grp_A          160 SI-VGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQK----------EAIMAMIPM  228 (266)
T ss_dssp             CC--------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHH----------HHHHTTCTT
T ss_pred             CH-HHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHH----------HHHHhcCCC
Confidence            87 5777888999999999999999999999999999999999999999998654321100          111223456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++..++|++..+.||+++...+++|..+..||++.
T Consensus       229 ~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          229 KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGMA  264 (266)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-
T ss_pred             CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCee
Confidence            778888999999999999999889999998888763

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=3.4e-43  Score=324.86  Aligned_cols=248  Identities=19%  Similarity=0.256  Sum_probs=211.1

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ...+++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++.+                 .+.++.+++
T Consensus        24 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~-----------------~~~~~~~~~   85 (273)
T 3uf0_A           24 TGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIAD-----------------GGGSAEAVV   85 (273)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHT-----------------TTCEEEEEE
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            34578899999999999999999999999999999999976 445566666543                 346789999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.++++++.+ ..+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||+
T Consensus        86 ~Dv~d~~~v~~~~~-~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~  162 (273)
T 3uf0_A           86 ADLADLEGAANVAE-ELAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAH-GSGRIVT  162 (273)
T ss_dssp             CCTTCHHHHHHHHH-HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ecCCCHHHHHHHHH-HHHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence            99999999999954 4566799999999999987 6888899999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ..+.....
T Consensus       163 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~~~  233 (273)
T 3uf0_A          163 IASM-LSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRAD--DER------AAEITARI  233 (273)
T ss_dssp             ECCG-GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHH------HHHHHHHS
T ss_pred             Ecch-HhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccC--HHH------HHHHHhcC
Confidence            9997 67788889999999999999999999999999999999999999999986432110  000      12233456


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++++..|+|++..+.||+++...+++|+.+..||++.
T Consensus       234 p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          234 PAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            67788899999999999999999899999998888763

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=3.1e-43  Score=324.61  Aligned_cols=251  Identities=24%  Similarity=0.316  Sum_probs=212.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..++++|++|||||++|||+++|++|+++|++|+++++ +.+.+++..+++++                 .+.++.++++
T Consensus        13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   75 (270)
T 3is3_A           13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA-----------------LGSDAIAIKA   75 (270)
T ss_dssp             TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            35789999999999999999999999999999999776 45667777777765                 3467899999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++   +|+||++
T Consensus        76 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~i  151 (270)
T 3is3_A           76 DIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLT  151 (270)
T ss_dssp             CTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEE
Confidence            999999999999999999999999999999986 688899999999999999999999999999999964   6899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH-----H
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE-----T  261 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe-----~  261 (368)
                      ||..+...+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++............   ....++     .
T Consensus       152 sS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~~~  228 (270)
T 3is3_A          152 SSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNG---TSYTAEQRQQMA  228 (270)
T ss_dssp             CCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTG---GGSCHHHHHHHH
T ss_pred             eCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccc---cccchHHHHHHH
Confidence            99854667788999999999999999999999999999999999999999998753211000000   000111     2


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ....+++++..|+|++..+.||+++...+++|..+..||++
T Consensus       229 ~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          229 AHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             HHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            23346778888999999999999999989999999888875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-43  Score=326.81  Aligned_cols=254  Identities=19%  Similarity=0.218  Sum_probs=209.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+                 
T Consensus         6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   68 (281)
T 3s55_A            6 ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK-----------------   68 (281)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH-----------------
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHh-----------------
Confidence            46899999999999999999999999999999999997            5566666555544                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++
T Consensus        69 ~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~  147 (281)
T 3s55_A           69 TGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIK  147 (281)
T ss_dssp             TTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999976 678899999999999999999999999999999988


Q ss_pred             CCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhc
Q 017635          177 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  256 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  256 (368)
                      + +.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....... .........
T Consensus       148 ~-~~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~  224 (281)
T 3s55_A          148 R-NYGRIVTVSSM-LGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVF-GTMRPDLEK  224 (281)
T ss_dssp             H-TCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHH-HC-------
T ss_pred             c-CCCEEEEECCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhh-ccccccccc
Confidence            7 57999999997 57778889999999999999999999999999999999999999999987431100 000000000


Q ss_pred             CCHHHHHH------HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          257 ELPETVAR------TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       257 ~~pe~~a~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...+....      ....++..|+|+++.+.||+++...+++|..+..||++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          225 PTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT  277 (281)
T ss_dssp             CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence            01111111      111456678899999999999998888898888888764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4e-43  Score=321.82  Aligned_cols=250  Identities=22%  Similarity=0.319  Sum_probs=212.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   64 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--------------------GPAAYAVQMDVT   64 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCTT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCCceEEEeeCC
Confidence            578999999999999999999999999999999999998887776665                    235788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|.+++++|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (259)
T 4e6p_A           65 RQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQ  143 (259)
T ss_dssp             CHHHHHHHHHHHHHHSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECCh
Confidence            999999999999999999999999999976 6788899999999999999999999999999999887557999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC--CHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE--LPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~pe~~a~~~~  267 (368)
                       ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++......... ........  ........++
T Consensus       144 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~  221 (259)
T 4e6p_A          144 -AGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFA-RYENRPRGEKKRLVGEAVPF  221 (259)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHH-HHHTCCTTHHHHHHHHHSTT
T ss_pred             -hhccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhh-hhccCChHHHHHHHhccCCC
Confidence             6778888999999999999999999999999999999999999999998643210000 00000000  0112234566


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..|+|++.++.||+++...+++|..+..||++
T Consensus       222 ~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          222 GRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             SSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence            78889999999999999999988888888888875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-43  Score=327.30  Aligned_cols=246  Identities=22%  Similarity=0.306  Sum_probs=197.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.+++++..+++..                 .+.++.++++|+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv   88 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSG-----------------LGARVIFLRADL   88 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEecC
Confidence            578999999999999999999999999999999995 77777777777765                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFN  185 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~  185 (368)
                      +|+++++++++++.+++|++|+||||||+.. ...++.+.+.++|++.+++|+.|+++++++++|.|++++  ..|+||+
T Consensus        89 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~  168 (280)
T 4da9_A           89 ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIIN  168 (280)
T ss_dssp             TSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence            9999999999999999999999999999831 256788999999999999999999999999999998752  2689999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH-H
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-R  264 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~  264 (368)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ..... .
T Consensus       169 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----------~~~~~~~  237 (280)
T 4da9_A          169 ITSV-SAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYD----------GLIESGL  237 (280)
T ss_dssp             ECCC--------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------
T ss_pred             Ecch-hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHH----------HHHhhcC
Confidence            9987 5777888999999999999999999999999999999999999999998754321110          01111 3


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|++..+.||+++...+++|+.+..||++.
T Consensus       238 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          238 VPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             ----CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred             CCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            567788889999999999999999999999999999874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.4e-42  Score=316.99  Aligned_cols=239  Identities=15%  Similarity=0.211  Sum_probs=208.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++.+|
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   70 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE----------------TGRQPQWFILD   70 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSCCCEEEECC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCCceEEEEe
Confidence            34689999999999999999999999999999999999999999888888663                22367889999


Q ss_pred             C--CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          108 V--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       108 v--~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +  +|.++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~  149 (252)
T 3f1l_A           71 LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVF  149 (252)
T ss_dssp             TTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEE
T ss_pred             cccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEE
Confidence            9  999999999999999999999999999986545788999999999999999999999999999999987 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++........          .       
T Consensus       150 isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~~----------~-------  210 (252)
T 3f1l_A          150 TSSS-VGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPTE----------D-------  210 (252)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTTC----------C-------
T ss_pred             ECCh-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCcc----------c-------
Confidence            9997 577888899999999999999999999999987 99999999999999853211100          1       


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                       ..++..|+|++..+.||+++...+++|..+..||++.
T Consensus       211 -~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~~  247 (252)
T 3f1l_A          211 -PQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGRK  247 (252)
T ss_dssp             -GGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC--
T ss_pred             -hhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCcC
Confidence             1245678889999999999999889999998888763

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=7.5e-44  Score=328.60  Aligned_cols=243  Identities=23%  Similarity=0.379  Sum_probs=208.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++| +.+.++++.+++++                 .+.++.+++
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~   84 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA-----------------AGGEAFAVK   84 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            346789999999999999999999999999999999998 66677777777655                 346788999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        85 ~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~  162 (269)
T 4dmm_A           85 ADVSQESEVEALFAAVIERWGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIIN  162 (269)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            9999999999999999999999999999999987 5788899999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++......             .......
T Consensus       163 isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-------------~~~~~~~  228 (269)
T 4dmm_A          163 IASV-VGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA-------------EKLLEVI  228 (269)
T ss_dssp             ECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH-------------HHHGGGC
T ss_pred             ECch-hhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH-------------HHHHhcC
Confidence            9987 5667788899999999999999999999999999999999999999998643110             1111223


Q ss_pred             hhhhhhhcccccceeeeccCH-HHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~  302 (368)
                      +++++..++|++..+.||+++ ...+++|..+..||++
T Consensus       229 p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          229 PLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             TTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTS
T ss_pred             CCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCe
Confidence            456677788888888898886 7778888888888876

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=3.7e-44  Score=329.37  Aligned_cols=250  Identities=22%  Similarity=0.309  Sum_probs=204.5

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC---hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  101 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v  101 (368)
                      +...+++++|++|||||++|||+++|++|+++|++|++++|+   .++++++.+++++                 .+.++
T Consensus         3 ~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-----------------~~~~~   65 (262)
T 3ksu_A            3 LTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELED-----------------QGAKV   65 (262)
T ss_dssp             -CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHT-----------------TTCEE
T ss_pred             CccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHh-----------------cCCcE
Confidence            455678999999999999999999999999999999998775   4455566666543                 35689


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          102 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       102 ~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      .++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+   +.|
T Consensus        66 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g  141 (262)
T 3ksu_A           66 ALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN---PNG  141 (262)
T ss_dssp             EEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE---EEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc---CCC
Confidence            99999999999999999999999999999999999987 57888999999999999999999999999999994   368


Q ss_pred             EEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          182 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       182 ~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      +||++||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++........   .      ....
T Consensus       142 ~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~---~------~~~~  211 (262)
T 3ksu_A          142 HIITIATS-LLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKE---S------TAFH  211 (262)
T ss_dssp             EEEEECCC-HHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-----------------
T ss_pred             EEEEEech-hhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchH---H------HHHH
Confidence            99999987 456667788899999999999999999999999999999999999999875422111   0      1122


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCC
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ  306 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  306 (368)
                      ....+.+++..|++++..+.||+++ ..+++|..+..||++....
T Consensus       212 ~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~~~~~  255 (262)
T 3ksu_A          212 KSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGYTTRE  255 (262)
T ss_dssp             ----CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTCCCC-
T ss_pred             HhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCccCCC
Confidence            2345667888999999999999999 8889999999999885543

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.9e-44  Score=327.76  Aligned_cols=244  Identities=24%  Similarity=0.388  Sum_probs=200.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .|++++|++|||||++|||+++|++|+++|++|+++ .|+.+.++++.++++.                 .+.++.++++
T Consensus        22 ~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   84 (267)
T 3u5t_A           22 SMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA-----------------AGGKALTAQA   84 (267)
T ss_dssp             -----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCeEEEEEc
Confidence            366789999999999999999999999999999987 5566777777776655                 3467889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++   +|+||++
T Consensus        85 Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~i  160 (267)
T 3u5t_A           85 DVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINM  160 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEE
Confidence            999999999999999999999999999999976 678899999999999999999999999999999964   5899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........         .......+
T Consensus       161 sS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~---------~~~~~~~p  230 (267)
T 3u5t_A          161 STS-QVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVR---------DRFAKLAP  230 (267)
T ss_dssp             CCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CH---------HHHHTSST
T ss_pred             eCh-hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHH---------HHHHhcCC
Confidence            987 56667888999999999999999999999999999999999999999987442211100         11112245


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..|++++..+.||+++...+++|+.+..||++
T Consensus       231 ~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          231 LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSSC
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCCc
Confidence            667788899999999999999888999999888876

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=7.2e-43  Score=322.36  Aligned_cols=244  Identities=20%  Similarity=0.291  Sum_probs=210.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++.+|+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   66 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--------------------GRGAVHHVVDL   66 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--------------------CTTCEEEECCT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCCeEEEECCC
Confidence            4678999999999999999999999999999999999998887766654                    24577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +|.++++++++++.+++|++|+||||||+..+ ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++|
T Consensus        67 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~is  145 (271)
T 3tzq_B           67 TNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNIS  145 (271)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEC
Confidence            99999999999999999999999999998732 4567889999999999999999999999999999987 589999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++......   ....      .......++
T Consensus       146 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~------~~~~~~~~~  215 (271)
T 3tzq_B          146 SA-TAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLP---QPIV------DIFATHHLA  215 (271)
T ss_dssp             CG-GGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---C---HHHH------HHHHTTSTT
T ss_pred             CH-HHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCC---HHHH------HHHHhcCCC
Confidence            87 6778888999999999999999999999999999999999999999998653211   1110      111223456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++..|+|++..+.||+++...+++|..+..||++.
T Consensus       216 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  251 (271)
T 3tzq_B          216 GRIGEPHEIAELVCFLASDRAAFITGQVIAADSGLL  251 (271)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCCcc
Confidence            777888999999999999999899999999998853

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.8e-43  Score=326.01  Aligned_cols=252  Identities=17%  Similarity=0.261  Sum_probs=202.2

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHhhhhhhhcCCCCc
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      .+..++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++..              
T Consensus         6 ~~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--------------   71 (278)
T 3sx2_A            6 SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED--------------   71 (278)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHH--------------
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHh--------------
Confidence            34567899999999999999999999999999999999987            6677766666654              


Q ss_pred             ccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHH
Q 017635           94 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV  173 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  173 (368)
                         .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ...    +.++|++.+++|+.|+++++++++|+
T Consensus        72 ---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~  143 (278)
T 3sx2_A           72 ---IGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-MSA----GDDGWHDVIDVNLTGVYHTIKVAIPT  143 (278)
T ss_dssp             ---HTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CSS----THHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ---cCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCC----CHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence               3467899999999999999999999999999999999999865 222    58999999999999999999999999


Q ss_pred             HHcCCCCcEEEEEcCCCCCCCCC----CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchh
Q 017635          174 MRDQPKGGHIFNMDGAGSGGSST----PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK  249 (368)
Q Consensus       174 m~~~~~~g~Iv~isS~~~~~~~~----~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~  249 (368)
                      |++++.+|+||++||. ++..+.    ++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  .
T Consensus       144 ~~~~~~~g~iv~isS~-~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~  220 (278)
T 3sx2_A          144 LVKQGTGGSIVLISSS-AGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTR--E  220 (278)
T ss_dssp             HHHHCSCEEEEEECCG-GGTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHH--H
T ss_pred             HHhCCCCcEEEEEccH-HhcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHH--H
Confidence            9887557999999987 455544    67789999999999999999999999999999999999999987532110  0


Q ss_pred             hhhhh--hcCCHHHHH-HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          250 QMFNI--ICELPETVA-RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       250 ~~~~~--~~~~pe~~a-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .....  ....+.... ..+ .++..|+|++..+.||+++...+++|..+..||++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          221 WLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             HHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             HHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence            00000  000000000 011 355678888899999999998889999998888864

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-42  Score=320.25  Aligned_cols=252  Identities=22%  Similarity=0.348  Sum_probs=208.9

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ...+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.+++
T Consensus        14 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~   76 (273)
T 1ae1_A           14 EGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----------------KGLNVEGSV   76 (273)
T ss_dssp             --CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             cccCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEE
Confidence            345678999999999999999999999999999999999999988887777754                 245788999


Q ss_pred             ccCCCHHHHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|++|+++++++++++.+++ |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||
T Consensus        77 ~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv  154 (273)
T 1ae1_A           77 CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVI  154 (273)
T ss_dssp             CCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            99999999999999999999 99999999999876 5788899999999999999999999999999999876 479999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc--hhhhhhhhcCCHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQMFNIICELPETV  262 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~pe~~  262 (368)
                      ++||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++........  ....      .....
T Consensus       155 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~  227 (273)
T 1ae1_A          155 FLSSI-AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEE------IDNFI  227 (273)
T ss_dssp             EECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHH------HHHHH
T ss_pred             EEcCH-hhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHH------HHHHH
Confidence            99987 567778889999999999999999999999999999999999999999864321100  0000      01122


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...+++++..|+|++..+.||+++...+++|..+..+|++.
T Consensus       228 ~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          228 VKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence            33456677888999999999999888888888888888763

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.5e-42  Score=321.96  Aligned_cols=253  Identities=22%  Similarity=0.210  Sum_probs=205.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..++                    .+.++.++++|+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dv   60 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA--------------------HGGNAVGVVGDV   60 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--------------------TBTTEEEEECCT
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH--------------------cCCcEEEEEcCC
Confidence            568899999999999999999999999999999999998887665443                    235788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCC----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|.++++++++++.+++|++|+||||||+.....++    .+.+.++|++.+++|+.|+++++++++|+|+++  +|+||
T Consensus        61 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv  138 (281)
T 3zv4_A           61 RSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVV  138 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEE
Confidence            999999999999999999999999999986422233    345567899999999999999999999999875  48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.++...|++||+|+++|+++|+.|+++. |+||+|+||+|+|++.........................
T Consensus       139 ~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (281)
T 3zv4_A          139 FTISN-AGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV  216 (281)
T ss_dssp             EECCG-GGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT
T ss_pred             EEecc-hhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc
Confidence            99987 677888899999999999999999999999987 9999999999999987532211111100000000112233


Q ss_pred             HhhhhhhhcccccceeeeccC-HHHHHHHhhhhhcCCceecC
Q 017635          265 TLVPRIRVVKGSGKAINYLTP-PRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~g~~~~~  305 (368)
                      .+++|+..|+|++..+.||++ +...+++|+.+..||++...
T Consensus       217 ~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          217 LPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             CTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSGGGC
T ss_pred             CCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCCccc
Confidence            567888999999999999999 78888999999999988543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2e-42  Score=326.45  Aligned_cols=254  Identities=24%  Similarity=0.340  Sum_probs=211.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++.+                 
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  104 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE-----------------  104 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHH-----------------
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHh-----------------
Confidence            35789999999999999999999999999999999886            5666666666654                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++
T Consensus       105 ~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  183 (317)
T 3oec_A          105 QGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIE  183 (317)
T ss_dssp             TTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999999999999987 578889999999999999999999999999999998


Q ss_pred             CCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh-
Q 017635          177 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII-  255 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~-  255 (368)
                      ++.+|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++......  .+.+.... 
T Consensus       184 ~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~  260 (317)
T 3oec_A          184 RGQGGSVIFVSST-VGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKL--LKMFLPHLE  260 (317)
T ss_dssp             TCSCEEEEEECCG-GGSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHH--HHHHCTTCS
T ss_pred             cCCCCEEEEECcH-HhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhh--hhhhhhhcc
Confidence            7557999999997 6778889999999999999999999999999999999999999999998642110  00000000 


Q ss_pred             cCCHHHHHHHh-----h-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          256 CELPETVARTL-----V-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       256 ~~~pe~~a~~~-----~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ....+...+..     . .+...|+|++.++.||+++...+++|..+..||++.
T Consensus       261 ~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          261 NPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             SCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             ccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence            11222222211     1 344578899999999999999999999999998874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=3.7e-43  Score=321.49  Aligned_cols=245  Identities=18%  Similarity=0.280  Sum_probs=209.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.++++|++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   64 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF--------------------GPRVHALRSDIA   64 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCcceEEEccCC
Confidence            578999999999999999999999999999999999998887766554                    246889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++   +|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~  140 (255)
T 4eso_A           65 DLNEIAVLGAAAGQTLGAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSV  140 (255)
T ss_dssp             CHHHHHHHHHHHHHHHSSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECCh
Confidence            999999999999999999999999999977 688899999999999999999999999999999864   5899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........ ......   ........++++
T Consensus       141 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~-~~~~~~---~~~~~~~~p~~r  215 (255)
T 4eso_A          141 -ADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITE-AERAEF---KTLGDNITPMKR  215 (255)
T ss_dssp             -GGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCH-HHHHHH---HHHHHHHSTTSS
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCCh-hhHHHH---HHHHhccCCCCC
Confidence             677888999999999999999999999999999999999999999999864321110 000000   011123356778


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +..|+|+++.+.||+++ ..+++|..+..||++..
T Consensus       216 ~~~pedvA~~v~~L~s~-~~~itG~~i~vdGG~~~  249 (255)
T 4eso_A          216 NGTADEVARAVLFLAFE-ATFTTGAKLAVDGGLGQ  249 (255)
T ss_dssp             CBCHHHHHHHHHHHHHT-CTTCCSCEEEESTTTTT
T ss_pred             CcCHHHHHHHHHHHcCc-CcCccCCEEEECCCccc
Confidence            88899999999999988 77889999999888743

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.2e-42  Score=325.03  Aligned_cols=254  Identities=16%  Similarity=0.122  Sum_probs=213.0

Q ss_pred             cccccCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           25 LEEHCKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +.+.+++++|++|||||++  |||+++|++|+++|++|++++|+.+..+...+...+                  ...+.
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~   83 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAES------------------LGVKL   83 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH------------------HTCCE
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh------------------cCCeE
Confidence            4456788999999999996  999999999999999999999997654443333222                  12467


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      +++||++|.++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.++++++++++|+|++   
T Consensus        84 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---  160 (296)
T 3k31_A           84 TVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---  160 (296)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---
T ss_pred             EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---
Confidence            89999999999999999999999999999999998752   167788999999999999999999999999999964   


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  259 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  259 (368)
                      +|+||++||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ...      ..
T Consensus       161 ~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~--~~~------~~  231 (296)
T 3k31_A          161 GGSILTLSYY-GAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDF--HYI------LT  231 (296)
T ss_dssp             CEEEEEEECG-GGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHH--HHH------HH
T ss_pred             CCEEEEEEeh-hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccch--HHH------HH
Confidence            6899999997 57778889999999999999999999999999999999999999999986432210  000      11


Q ss_pred             HHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCCCc
Q 017635          260 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGR  308 (368)
Q Consensus       260 e~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~  308 (368)
                      ......+++++..|+|++..+.||+++...+++|..+..||++......
T Consensus       232 ~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          232 WNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             HHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCccccCCc
Confidence            2233456778889999999999999999999999999999988655433

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2.4e-42  Score=318.15  Aligned_cols=249  Identities=21%  Similarity=0.290  Sum_probs=211.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+..+..+.+|+
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D~   70 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQY---------------PDAILQPVVADL   70 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHC---------------TTCEEEEEECCT
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC---------------CCceEEEEecCC
Confidence            57899999999999999999999999999999999999999999888887642               235788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|++++++++    +++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        71 ~~~~~~~~~~----~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS  144 (267)
T 3t4x_A           71 GTEQGCQDVI----EKYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIAS  144 (267)
T ss_dssp             TSHHHHHHHH----HHCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECC
T ss_pred             CCHHHHHHHH----HhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcc
Confidence            9999988765    45799999999999977 5788899999999999999999999999999999987 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH----
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR----  264 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~----  264 (368)
                      . ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+++|++.......    ........+++..+    
T Consensus       145 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~  219 (267)
T 3t4x_A          145 E-AAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNS----LYPNEQLTIEEAEKRFMK  219 (267)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHH----SSTTSCCCHHHHHHHHHH
T ss_pred             h-hhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhh----cCcccCCCHHHHHHHHhh
Confidence            7 67788899999999999999999999999999999999999999999975431110    00000011222222    


Q ss_pred             -----HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 -----TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 -----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                           .+++++..|+|++.++.||+++...+++|+.+..||++.
T Consensus       220 ~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          220 ENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             HHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             ccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCcc
Confidence                 135678889999999999999999999999999999874

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=9.1e-43  Score=316.92  Aligned_cols=244  Identities=21%  Similarity=0.296  Sum_probs=211.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++.+|+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   63 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE-----------------KGFKARGLVLNI   63 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEecC
Confidence            467899999999999999999999999999999999999998888888765                 346789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|+||||||+.. ..++.+.+.+++++.+++|+.+++++++.++|.|.++ +.|+||++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS  141 (247)
T 3lyl_A           64 SDIESIQNFFAEIKAENLAIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKK-RWGRIISIGS  141 (247)
T ss_dssp             TCHHHHHHHHHHHHHTTCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcc
Confidence            9999999999999999999999999999987 5788899999999999999999999999999999877 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++..........          ......+.+
T Consensus       142 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~----------~~~~~~~~~  210 (247)
T 3lyl_A          142 V-VGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKS----------FIATKIPSG  210 (247)
T ss_dssp             T-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHH----------HHHTTSTTC
T ss_pred             h-hhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHH----------HHhhcCCCC
Confidence            7 56677888999999999999999999999999999999999999999987543211110          011123445


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++..|+++++.+.||+++...+++|..+..+|++
T Consensus       211 ~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          211 QIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCE
Confidence            6667788888888888888877888888888776

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.3e-42  Score=317.76  Aligned_cols=251  Identities=22%  Similarity=0.314  Sum_probs=208.8

Q ss_pred             cccccCCCCCeEEEEcCC-ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           25 LEEHCKAGPRNVVITGST-RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas-~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +.+.+++++|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++++.                .+.++.+
T Consensus        14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~   77 (266)
T 3o38_A           14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL----------------GLGRVEA   77 (266)
T ss_dssp             CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------CSSCEEE
T ss_pred             cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc----------------CCCceEE
Confidence            344567899999999997 59999999999999999999999999998888887542                2357999


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +++|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.+++++++.++|+|++++++++|
T Consensus        78 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i  156 (266)
T 3o38_A           78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVI  156 (266)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEE
T ss_pred             EEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEE
Confidence            999999999999999999999999999999999876 5788899999999999999999999999999999987668899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........   ..      .....
T Consensus       157 v~~sS~-~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~------~~~~~  226 (266)
T 3o38_A          157 VNNASV-LGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSE---LL------DRLAS  226 (266)
T ss_dssp             EEECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------------
T ss_pred             EEeCCH-HHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHH---HH------HHHHh
Confidence            999987 577888899999999999999999999999999999999999999999875432111   00      11112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+++++..++|++..+.||+++...+++|..+..+|++
T Consensus       227 ~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  265 (266)
T 3o38_A          227 DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR  265 (266)
T ss_dssp             CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred             cCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCCc
Confidence            234566677888888888999888777888888777765

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=2.9e-42  Score=316.22  Aligned_cols=251  Identities=23%  Similarity=0.332  Sum_probs=210.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++++
T Consensus         3 ~~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   65 (260)
T 2ae2_A            3 GRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----------------KGFKVEASVC   65 (260)
T ss_dssp             CTTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEEC
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            44678999999999999999999999999999999999999988887777754                 3457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      |++|+++++++++++.+++ +++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        66 D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  143 (260)
T 2ae2_A           66 DLSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVF  143 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            9999999999999999999 89999999999876 5778889999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++.......  ......+   .......
T Consensus       144 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~---~~~~~~~  217 (260)
T 2ae2_A          144 ISSV-SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD--PEQKENL---NKLIDRC  217 (260)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS--HHHHHHH---HHHHHTS
T ss_pred             Ecch-hhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccC--hhhHHHH---HHHHhcC
Confidence            9987 56677888899999999999999999999999999999999999999985421110  0000000   0111223


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++++..|+|++..+.||+++...+++|..+..+|++
T Consensus       218 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          218 ALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            4556778888888889999888777778777777765

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=7.2e-43  Score=320.25  Aligned_cols=245  Identities=21%  Similarity=0.303  Sum_probs=201.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +++++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++++                 .+.++.++++|
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   66 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK-----------------LGRSALAIKAD   66 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT-----------------TTSCCEEEECC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEEcC
Confidence            57899999999999999999999999999999998 6677777777777654                 34578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+++|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|++   +|+||++|
T Consensus        67 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~is  143 (259)
T 3edm_A           67 LTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFS  143 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEc
Confidence            999999999999999999999999999998744678899999999999999999999999999999975   58999999


Q ss_pred             CCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          188 GAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       188 S~~~~~-~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      |. ++. .+.++...|++||+|+++|+++++.|+++. |+||+|+||+|+|++.......   ..      ........+
T Consensus       144 S~-~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~~---~~------~~~~~~~~p  212 (259)
T 3edm_A          144 SQ-AGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTKP---EV------RERVAGATS  212 (259)
T ss_dssp             CH-HHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------------
T ss_pred             CH-HhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccCh---HH------HHHHHhcCC
Confidence            87 344 677888999999999999999999999987 9999999999999987542211   00      111223456


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ++++..|+|++..+.||+++...+++|..+..||++..
T Consensus       213 ~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          213 LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             --CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence            77888899999999999999998999999999988743

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.8e-42  Score=316.22  Aligned_cols=249  Identities=22%  Similarity=0.290  Sum_probs=201.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.++.+|
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D   63 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI--------------------GDAALAVAAD   63 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECC
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--------------------CCceEEEEec
Confidence            46789999999999999999999999999999999999999887776654                    2468889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---CCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---KGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---~~g~Iv  184 (368)
                      ++|.++++++++++.+++|++|+||||||+.....++.+.+.+++++.+++|+.|++++++.++|+|++++   +.++||
T Consensus        64 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv  143 (261)
T 3n74_A           64 ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVIL  143 (261)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEE
Confidence            99999999999999999999999999999876456778889999999999999999999999999998652   267899


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+++|++............      .......
T Consensus       144 ~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~------~~~~~~~  216 (261)
T 3n74_A          144 NVAST-GAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEI------RKKFRDS  216 (261)
T ss_dssp             EECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------------
T ss_pred             EeCch-hhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHH------HHHHhhc
Confidence            99987 5778888999999999999999999999999999999999999999998754321111111      1112233


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+|+++.+.||+++...+++|..+..||++.
T Consensus       217 ~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  255 (261)
T 3n74_A          217 IPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGRS  255 (261)
T ss_dssp             CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCcc
Confidence            456677788999999999999998888898888888764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-42  Score=315.78  Aligned_cols=251  Identities=25%  Similarity=0.378  Sum_probs=210.6

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++.
T Consensus        14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~   77 (267)
T 1vl8_A           14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK----------------YGVETMAFR   77 (267)
T ss_dssp             ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEE
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCeEEEEE
Confidence            4456789999999999999999999999999999999999998888877776332                235688899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        78 ~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~  155 (267)
T 1vl8_A           78 CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIIN  155 (267)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            9999999999999999999999999999999876 5778889999999999999999999999999999876 5789999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||...+..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++......  .....      .......
T Consensus       156 isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~------~~~~~~~  227 (267)
T 1vl8_A          156 IGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--DPEKL------DYMLKRI  227 (267)
T ss_dssp             ECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--CHHHH------HHHHHTC
T ss_pred             ECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc--ChHHH------HHHHhhC
Confidence            998732666778889999999999999999999999999999999999999998532110  00000      0111223


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++++..+++++..+.||+++...+++|..+..+|++
T Consensus       228 p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          228 PLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            4567788999999999999988878888888887775

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.7e-42  Score=323.55  Aligned_cols=246  Identities=20%  Similarity=0.275  Sum_probs=208.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.  +..+++.+++++                 .+.++.+++
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~  106 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-----------------CGRKAVLLP  106 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-----------------TTCCEEECC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-----------------cCCcEEEEE
Confidence            4578999999999999999999999999999999999873  344444444443                 346788999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.++++++++++.+++|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|++   +|+||+
T Consensus       107 ~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~  183 (294)
T 3r3s_A          107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIIT  183 (294)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEE
Confidence            99999999999999999999999999999998654567889999999999999999999999999999853   589999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++........  ...      .......
T Consensus       184 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~--~~~------~~~~~~~  254 (294)
T 3r3s_A          184 TSSI-QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQ--DKI------PQFGQQT  254 (294)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCG--GGS------TTTTTTS
T ss_pred             ECCh-hhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCH--HHH------HHHHhcC
Confidence            9998 677788899999999999999999999999999999999999999999843221110  110      1112235


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++++..|+|++..+.||+++...+++|..+..||++
T Consensus       255 p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  291 (294)
T 3r3s_A          255 PMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_dssp             TTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            6778889999999999999999989999999888876

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.8e-41  Score=306.88  Aligned_cols=194  Identities=22%  Similarity=0.276  Sum_probs=170.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++++|+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv   65 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA-----------------AGGRIVARSLDA   65 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeEEEEECcC
Confidence            467899999999999999999999999999999999999999998888876                 346899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++ |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        66 ~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  142 (252)
T 3h7a_A           66 RNEDEVTAFLNAADAH-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAH-GQGKIFFTGA  142 (252)
T ss_dssp             TCHHHHHHHHHHHHHH-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEE
T ss_pred             CCHHHHHHHHHHHHhh-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECC
Confidence            9999999999999999 99999999999987 6888899999999999999999999999999999987 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEE-EEEecCcccCcccccC
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGV-HTASPGMVLTDLLLSG  243 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v-~~v~PG~v~T~~~~~~  243 (368)
                      . ++..+.++...|++||+|+++|+++|+.|++++||+| |+|+||+|+|++....
T Consensus       143 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~  197 (252)
T 3h7a_A          143 T-ASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER  197 (252)
T ss_dssp             G-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred             H-HHcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc
Confidence            7 6778889999999999999999999999999999999 9999999999987643

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=2.6e-42  Score=313.95  Aligned_cols=242  Identities=25%  Similarity=0.395  Sum_probs=204.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|+++||||++|||+++|++|+++|++|++++| +.++++++.+++++                 .+.++.++++|++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   64 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK-----------------LGSDAIAVRADVA   64 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            57899999999999999999999999999999999 88888877777754                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.|+||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  142 (246)
T 2uvd_A           65 NAEDVTNMVKQTVDVFGQVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQ-RHGRIVNIASV  142 (246)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCH
Confidence            999999999999999999999999999876 5778889999999999999999999999999999876 47999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.........          .......+.++
T Consensus       143 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~----------~~~~~~~p~~~  211 (246)
T 2uvd_A          143 -VGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIK----------AEMLKLIPAAQ  211 (246)
T ss_dssp             -HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHH----------HHHHHTCTTCS
T ss_pred             -HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHH----------HHHHhcCCCCC
Confidence             4556678889999999999999999999999999999999999999998643211100          01111223455


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +..|++++..+.||+++...++++..+..+|++
T Consensus       212 ~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          212 FGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            667788888888888887777777777777764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-42  Score=316.25  Aligned_cols=253  Identities=19%  Similarity=0.289  Sum_probs=208.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~   66 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-----------------KGVEARSYVCDVT   66 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTSCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCC
Confidence            56899999999999999999999999999999999999888877777653                 2457888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        67 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  145 (262)
T 1zem_A           67 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASM  145 (262)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcch
Confidence            99999999999999999999999999987225788889999999999999999999999999999876 47899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhh-hhhcCCHH-----HHH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIICELPE-----TVA  263 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~pe-----~~a  263 (368)
                       ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++............. ......++     ...
T Consensus       146 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T 1zem_A          146 -AGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  224 (262)
T ss_dssp             -HHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             -hhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHh
Confidence             46667788899999999999999999999999999999999999999986421000000000 00000122     112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      ..+++++..|++++..+.||+++...+++|..+..||+
T Consensus       225 ~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          225 SVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             TSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence            34567788999999999999999887777777766653

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-42  Score=316.59  Aligned_cols=251  Identities=24%  Similarity=0.319  Sum_probs=209.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++++|
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D   72 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA---------------PDAEVLTTVAD   72 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTCCEEEEECC
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc---------------CCceEEEEEcc
Confidence            356789999999999999999999999999999999999998888777775421               13578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|++++++.++|.|+++ +.|+||++|
T Consensus        73 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~is  151 (267)
T 1iy8_A           73 VSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTA  151 (267)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEc
Confidence            9999999999999999999999999999987522678889999999999999999999999999999876 479999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH----H-H
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE----T-V  262 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe----~-~  262 (368)
                      |. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++...........       ..+    . .
T Consensus       152 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-------~~~~~~~~~~  223 (267)
T 1iy8_A          152 SV-GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPE-------NPRKAAEEFI  223 (267)
T ss_dssp             CG-GGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTT-------CHHHHHHHHH
T ss_pred             ch-hhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChh-------hhhhHHHHHh
Confidence            97 567778889999999999999999999999999999999999999999854210000000       111    1 1


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ...+++++..|++++..+.||+++...+++|..+..+|++
T Consensus       224 ~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          224 QVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             TTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             ccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            1234566778889999999999988777788888777765

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.3e-41  Score=310.97  Aligned_cols=232  Identities=27%  Similarity=0.365  Sum_probs=185.6

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ....++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+..+.+++
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~   89 (281)
T 4dry_A           26 QGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR----------------TGNIVRAVV   89 (281)
T ss_dssp             --------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEE
T ss_pred             ccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------CCCeEEEEE
Confidence            3456789999999999999999999999999999999999999998888888653                123468899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIF  184 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv  184 (368)
                      +|++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|.|++++ ++|+||
T Consensus        90 ~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV  169 (281)
T 4dry_A           90 CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRII  169 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEE
T ss_pred             cCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEE
Confidence            9999999999999999999999999999999875447888999999999999999999999999999999874 368999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh---hhhhcCCHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM---FNIICELPET  261 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~pe~  261 (368)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++............   ......+||+
T Consensus       170 ~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ped  248 (281)
T 4dry_A          170 NNGSI-SAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEH  248 (281)
T ss_dssp             EECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEECTTSCEEECCCBCHHH
T ss_pred             EECCH-HhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHH
Confidence            99997 6778889999999999999999999999999999999999999999998754322111100   0011236777


Q ss_pred             HHHHhhhhhhhcc
Q 017635          262 VARTLVPRIRVVK  274 (368)
Q Consensus       262 ~a~~~~~~~~~~~  274 (368)
                      +|+.++..+..+.
T Consensus       249 vA~~v~fL~s~~~  261 (281)
T 4dry_A          249 IAEAVVYMASLPL  261 (281)
T ss_dssp             HHHHHHHHHHSCT
T ss_pred             HHHHHHHHhCCCc
Confidence            7777766555443

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.6e-41  Score=311.14  Aligned_cols=249  Identities=24%  Similarity=0.318  Sum_probs=210.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ...++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   70 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG-----------------EGLSVTGTVC   70 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEc
Confidence            34567899999999999999999999999999999999999888887777754                 2356888999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.+++|++|+||||||......++.+.+.++|++.+++|+.++++++++++|+|+++ +.++||++
T Consensus        71 D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~i  149 (260)
T 2zat_A           71 HVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIV  149 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEE
Confidence            99999999999999999999999999999986434677889999999999999999999999999999887 57899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++......  ....      ........+
T Consensus       150 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~------~~~~~~~~~  220 (260)
T 2zat_A          150 SSV-GAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM--DKAR------KEYMKESLR  220 (260)
T ss_dssp             CCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS--SHHH------HHHHHHHHT
T ss_pred             ech-hhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc--ChHH------HHHHHhcCC
Confidence            987 5677788899999999999999999999999999999999999999998532110  0000      011112345


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..++|++..+.||+++...++++..+..+|++
T Consensus       221 ~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          221 IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            667788999999999999988777778777777765

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-42  Score=323.13  Aligned_cols=239  Identities=18%  Similarity=0.228  Sum_probs=199.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-------HHHHHHHHHHHHhhhhhhhcCCCCcccccCce
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-------SVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  100 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  100 (368)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++.+                 .+.+
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----------------~~~~   66 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEE-----------------AGGQ   66 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----------------HTSE
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHh-----------------cCCc
Confidence            46789999999999999999999999999999999999976       45666666654                 3468


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 017635          101 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  180 (368)
Q Consensus       101 v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  180 (368)
                      +.+++||++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.
T Consensus        67 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~  144 (285)
T 3sc4_A           67 ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGR-DN  144 (285)
T ss_dssp             EEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTS-SS
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CC
Confidence            999999999999999999999999999999999999986 6888999999999999999999999999999999887 57


Q ss_pred             cEEEEEcCCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCcccccCcccchhhhhhhhcCC
Q 017635          181 GHIFNMDGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       181 g~Iv~isS~~~~~~~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG-~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      |+||++||. ++..+. +....|++||+|+++|+++|+.|++++||+||+|+|| .++|++.......            
T Consensus       145 g~iv~isS~-~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~------------  211 (285)
T 3sc4_A          145 PHILTLSPP-IRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGG------------  211 (285)
T ss_dssp             CEEEECCCC-CCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTS------------
T ss_pred             cEEEEECCh-hhccCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccc------------
Confidence            999999997 455554 7779999999999999999999999999999999999 6999986432110            


Q ss_pred             HHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          259 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                           ..+++++..|++++..+.||+++.. +++|..+..+|++..
T Consensus       212 -----~~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~dgg~~~  251 (285)
T 3sc4_A          212 -----DEAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCEDVLLE  251 (285)
T ss_dssp             -----CCCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHHHHHHH
T ss_pred             -----cccccCCCCHHHHHHHHHHHhCCcc-cccceEEEEcCchhc
Confidence                 0123444556666666667777666 667777776666544

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-40  Score=306.60  Aligned_cols=222  Identities=25%  Similarity=0.442  Sum_probs=182.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.+|++|
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~d   64 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD-----------------AGGTALAQVLDVTD   64 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH-----------------TTCEEEEEECCTTC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEcCCCC
Confidence            5689999999999999999999999999999999999999988888866                 34678899999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|.|+++ +.|+||++||. 
T Consensus        65 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~-  141 (264)
T 3tfo_A           65 RHSVAAFAQAAVDTWGRIDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSI-  141 (264)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCH-
Confidence            99999999999999999999999999976 6888999999999999999999999999999999877 57999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh---hhhhcCCHHHHHHHhh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM---FNIICELPETVARTLV  267 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~---~~~~~~~pe~~a~~~~  267 (368)
                      ++..+.++...|++||+|+++|+++|+.|+ + |||||+|+||+|+|++............   ......+||++|+.++
T Consensus       142 ~~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~  219 (264)
T 3tfo_A          142 GALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEETMAAMDTYRAIALQPADIARAVR  219 (264)
T ss_dssp             GGTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------CCCHHHHHHHHH
T ss_pred             HHcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHH
Confidence            677888999999999999999999999998 5 9999999999999998754322111110   1111236777777776


Q ss_pred             hhhhhcc
Q 017635          268 PRIRVVK  274 (368)
Q Consensus       268 ~~~~~~~  274 (368)
                      ..+..+.
T Consensus       220 ~l~s~~~  226 (264)
T 3tfo_A          220 QVIEAPQ  226 (264)
T ss_dssp             HHHHSCT
T ss_pred             HHhcCCc
Confidence            6554443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=7.7e-42  Score=313.43  Aligned_cols=253  Identities=21%  Similarity=0.244  Sum_probs=203.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++ ++++.+++.+.                .+.++.++.+|++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~   65 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ----------------HGVKVLYDGADLS   65 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH----------------HTSCEEEECCCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhc----------------cCCcEEEEECCCC
Confidence            578999999999999999999999999999999999887 77777776542                1346888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  143 (260)
T 1x1t_A           66 KGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA  143 (260)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECcH
Confidence            999999999999999999999999999876 5778889999999999999999999999999999876 47999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH--HHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET--VARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~--~a~~~~  267 (368)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++....................+.  ....++
T Consensus       144 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  222 (260)
T 1x1t_A          144 -HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS  222 (260)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred             -HhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCC
Confidence             56677788999999999999999999999999999999999999999986432110000000000000000  122345


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..|++++..+.||+++...+++|..+..+|++
T Consensus       223 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            67778899999999999988777788888777765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2e-41  Score=312.90  Aligned_cols=199  Identities=30%  Similarity=0.472  Sum_probs=169.9

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +.+....++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.
T Consensus        18 ~~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~   77 (272)
T 4dyv_A           18 LYFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--------------------DDAL   77 (272)
T ss_dssp             ----------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--------------------SCCE
T ss_pred             eehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--------------------CCeE
Confidence            33444456789999999999999999999999999999999999988877766652                    4678


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCc
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGG  181 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g  181 (368)
                      ++++|++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++.+++|+.|+++++++++|.|++++ ++|
T Consensus        78 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g  157 (272)
T 4dyv_A           78 CVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGG  157 (272)
T ss_dssp             EEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCE
T ss_pred             EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCc
Confidence            8999999999999999999999999999999999976447888999999999999999999999999999999763 268


Q ss_pred             EEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          182 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       182 ~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       158 ~IV~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  217 (272)
T 4dyv_A          158 RIINNGSI-SATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK  217 (272)
T ss_dssp             EEEEECCS-STTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------
T ss_pred             EEEEECch-hhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh
Confidence            99999998 6778888999999999999999999999999999999999999999998754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.9e-42  Score=321.59  Aligned_cols=247  Identities=20%  Similarity=0.236  Sum_probs=208.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.++..+...+..+.                .+.++.++++|
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D  105 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK----------------EGVKCVLLPGD  105 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT----------------TTCCEEEEESC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh----------------cCCcEEEEECC
Confidence            34678999999999999999999999999999999999977544333333221                34678999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||...+..++.+.+.++|++.+++|+.|+++++++++|+|++   +++||++|
T Consensus       106 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~is  182 (291)
T 3ijr_A          106 LSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTA  182 (291)
T ss_dssp             TTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEe
Confidence            999999999999999999999999999998754567888999999999999999999999999999953   57999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ... .      ......++
T Consensus       183 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~--~~~-~------~~~~~~p~  252 (291)
T 3ijr_A          183 SI-VAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDE--KKV-S------QFGSNVPM  252 (291)
T ss_dssp             CT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCH--HHH-H------HTTTTSTT
T ss_pred             ch-HhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCH--HHH-H------HHHccCCC
Confidence            87 56677888899999999999999999999999999999999999999986432110  000 0      01123456


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++..++|++..+.||+++...+++|..+..||++.
T Consensus       253 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          253 QRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             SSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSCC
T ss_pred             CCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCcc
Confidence            778899999999999999999899999998888874

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=3e-42  Score=318.70  Aligned_cols=193  Identities=21%  Similarity=0.337  Sum_probs=171.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-------HHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  101 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v  101 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++..                 .+.++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~   64 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNA-----------------AGGQG   64 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHH-----------------HTSEE
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHh-----------------cCCeE
Confidence            67899999999999999999999999999999999999764       4555555544                 34689


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          102 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       102 ~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      .++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++ +.|
T Consensus        65 ~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g  142 (274)
T 3e03_A           65 LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQA-PNP  142 (274)
T ss_dssp             EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTS-SSC
T ss_pred             EEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhc-CCc
Confidence            99999999999999999999999999999999999976 5788899999999999999999999999999999887 579


Q ss_pred             EEEEEcCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC-cccCcccc
Q 017635          182 HIFNMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG-MVLTDLLL  241 (368)
Q Consensus       182 ~Iv~isS~~~~~~~--~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG-~v~T~~~~  241 (368)
                      +||++||. ++..+  .+....|++||+|+++|+++++.|++++||+||+|+|| .++|++..
T Consensus       143 ~iv~isS~-~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~  204 (274)
T 3e03_A          143 HILTLAPP-PSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAIN  204 (274)
T ss_dssp             EEEECCCC-CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----
T ss_pred             eEEEECCh-HhcCCCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhh
Confidence            99999987 45555  56778999999999999999999999999999999999 69999863

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-42  Score=317.58  Aligned_cols=241  Identities=22%  Similarity=0.239  Sum_probs=188.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   62 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL--------------------GAAVRFRNADV   62 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------------------------CEEEECCT
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------------------CCceEEEEccC
Confidence            5689999999999999999999999999999999999998877666554                    24678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCC----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PK  179 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~  179 (368)
                      +|+++++++++++.+++|++|+||||||+.. ..++    .+.+.++|++.+++|+.|+++++++++|+|+++     ++
T Consensus        63 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~  141 (257)
T 3tpc_A           63 TNEADATAALAFAKQEFGHVHGLVNCAGTAP-GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGE  141 (257)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCC
Confidence            9999999999999999999999999999875 2333    367899999999999999999999999999874     25


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  259 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  259 (368)
                      .|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........+.         
T Consensus       142 ~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~---------  211 (257)
T 3tpc_A          142 RGVIVNTASI-AAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDA---------  211 (257)
T ss_dssp             CEEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------------
T ss_pred             CeEEEEEech-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHH---------
Confidence            7899999987 566778889999999999999999999999999999999999999999875422111110         


Q ss_pred             HHHHHHhh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          260 ETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       260 e~~a~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                       .....++ +++..|+|++..+.||+++  .+++|..+..||++.
T Consensus       212 -~~~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~~  253 (257)
T 3tpc_A          212 -LAASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDGALR  253 (257)
T ss_dssp             ---CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTCC
T ss_pred             -HHhcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECCCcc
Confidence             0111233 5666777778888888765  467777888877763

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=3.4e-42  Score=317.75  Aligned_cols=247  Identities=22%  Similarity=0.313  Sum_probs=204.4

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      ...|++++|++|||||++|||+++|++|+++|++|++++|+ .+..++..+++++                 .+.++.++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~   84 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE-----------------KGYKAAVI   84 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEE
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCceEEE
Confidence            45678999999999999999999999999999999999995 4455555555544                 34678999


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|++|.++++++++++.++++++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.|+||
T Consensus        85 ~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv  162 (271)
T 4iin_A           85 KFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVV  162 (271)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             ECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEE
Confidence            99999999999999999999999999999999987 5778889999999999999999999999999999887 579999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ......
T Consensus       163 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----------~~~~~~  231 (271)
T 4iin_A          163 NVASI-IGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELK----------ADYVKN  231 (271)
T ss_dssp             EECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------------CGGG
T ss_pred             EEech-hhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHH----------HHHHhc
Confidence            99987 5667788899999999999999999999999999999999999999998754321111          111112


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++++..|+++++.+.||+++...+++|..+..||++
T Consensus       232 ~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          232 IPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            34556667788888888898888878888888888876

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.2e-42  Score=313.57  Aligned_cols=247  Identities=21%  Similarity=0.268  Sum_probs=208.1

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      +++.+.++|++|||||++|||+++|++|+++|++|++++ |+.++.++..+++++                 .+.++.++
T Consensus         6 ~~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~   68 (256)
T 3ezl_A            6 HHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA-----------------LGFDFYAS   68 (256)
T ss_dssp             -------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH-----------------TTCCCEEE
T ss_pred             CCCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh-----------------cCCeeEEE
Confidence            445678899999999999999999999999999999988 677777777776654                 34678899


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      .+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|+|+++ +.|+||
T Consensus        69 ~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv  146 (256)
T 3ezl_A           69 EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVER-GWGRII  146 (256)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEE
T ss_pred             ecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEE
Confidence            99999999999999999999999999999999987 5788899999999999999999999999999999987 579999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          ......
T Consensus       147 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----------~~~~~~  215 (256)
T 3ezl_A          147 NISSV-NGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVL----------EKIVAT  215 (256)
T ss_dssp             EECCC-CGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH----------HHHHHH
T ss_pred             EEcch-hhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHH----------HHHHhc
Confidence            99997 5777888999999999999999999999999999999999999999998754321110          112233


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++.++..+++++..+.||+++...+++|..+..+|++
T Consensus       216 ~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          216 IPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCE
Confidence            45567778888999999999988888888888888776

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.4e-41  Score=317.22  Aligned_cols=247  Identities=15%  Similarity=0.156  Sum_probs=205.0

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.+.. +..+++.+.                 ..++.+++|
T Consensus        27 ~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~-----------------~~~~~~~~~   88 (293)
T 3grk_A           27 GLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEE-----------------LGAFVAGHC   88 (293)
T ss_dssp             CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHH-----------------HTCEEEEEC
T ss_pred             ccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHh-----------------cCCceEEEC
Confidence            46899999999999  5699999999999999999999995433 334444332                 135788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |++|.++++++++++.+++|++|+||||||+..+   ..++.+.+.++|++.+++|+.++++++++++|+|++   +|+|
T Consensus        89 Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~I  165 (293)
T 3grk_A           89 DVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSI  165 (293)
T ss_dssp             CTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEE
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEE
Confidence            9999999999999999999999999999998752   367788999999999999999999999999999974   6899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ......
T Consensus       166 v~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~------~~~~~~  236 (293)
T 3grk_A          166 LTLTYY-GAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDF--RYI------LKWNEY  236 (293)
T ss_dssp             EEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCH--HHH------HHHHHH
T ss_pred             EEEeeh-hhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccch--HHH------HHHHHh
Confidence            999997 57778889999999999999999999999999999999999999999986432211  111      112233


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      ..+++++..++|++..+.||+++...+++|..+..||++...
T Consensus       237 ~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          237 NAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCcccC
Confidence            456778888999999999999999989999999999988543

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-41  Score=309.73  Aligned_cols=239  Identities=22%  Similarity=0.264  Sum_probs=201.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                      .+.++.+|+
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------------~~~~~~~D~   58 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------GAHPVVMDV   58 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------------TCEEEECCT
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----------------------CCEEEEecC
Confidence            4578999999999999999999999999999999999987765543321                      167789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        59 ~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS  136 (245)
T 1uls_A           59 ADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS  136 (245)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEcc
Confidence            9999999999999999999999999999876 5778889999999999999999999999999999876 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . + ..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++......    ...      .......+++
T Consensus       137 ~-~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~------~~~~~~~p~~  204 (245)
T 1uls_A          137 R-V-YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPE----KVR------EKAIAATPLG  204 (245)
T ss_dssp             G-G-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH----HHH------HHHHHTCTTC
T ss_pred             c-h-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCH----HHH------HHHHhhCCCC
Confidence            7 3 56778889999999999999999999999999999999999999998643211    000      0111123445


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++..|++++..+.||+++...+++|..+..+|++.
T Consensus       205 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          205 RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (245)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCcc
Confidence            66778888888888888887777888888877753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.5e-41  Score=309.93  Aligned_cols=244  Identities=23%  Similarity=0.327  Sum_probs=181.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.+|
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   66 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA-----------------DGGTAISVAVD   66 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCcEEEEEcc
Confidence            4678999999999999999999999999999999999999999988888865                 34688999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCC--CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      ++|+++++++++++.+++|++|+||||||+..  ...++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||+
T Consensus        67 ~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  145 (253)
T 3qiv_A           67 VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKR-GGGAIVN  145 (253)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEE
Confidence            99999999999999999999999999999842  24567789999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||.. +.   +....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......   ..      ........
T Consensus       146 isS~~-~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~------~~~~~~~~  212 (253)
T 3qiv_A          146 QSSTA-AW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK---EM------VDDIVKGL  212 (253)
T ss_dssp             ECC---------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC---------------------------------
T ss_pred             ECCcc-cc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH---HH------HHHHhccC
Confidence            99873 33   45678999999999999999999999999999999999999986432211   11      01122234


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++.++..++|++..+.|++++...+++|..+..+|++
T Consensus       213 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          213 PLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             -------CCHHHHHHHHHHSGGGTTCCSCEEEC----
T ss_pred             CCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCe
Confidence            5667778999999999999988777777777777665

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=6.2e-42  Score=316.94  Aligned_cols=249  Identities=20%  Similarity=0.259  Sum_probs=207.2

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      ..+.+.|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+ ++.
T Consensus        19 ~~~~~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~-~~~   80 (276)
T 2b4q_A           19 SHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA-----------------YG-DCQ   80 (276)
T ss_dssp             --CCTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT-----------------SS-CEE
T ss_pred             cccccccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cC-ceE
Confidence            344556788999999999999999999999999999999999999888777666632                 22 688


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC---
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK---  179 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~---  179 (368)
                      ++.+|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++++.   
T Consensus        81 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~  159 (276)
T 2b4q_A           81 AIPADLSSEAGARRLAQALGELSARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAEN  159 (276)
T ss_dssp             ECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSS
T ss_pred             EEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCC
Confidence            8999999999999999999999999999999999876 577888999999999999999999999999999987632   


Q ss_pred             CcEEEEEcCCCCCCCCCCCch-hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCC
Q 017635          180 GGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~-~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      .++||++||. ++..+.+... .|++||+++++|+++++.|++++||+||+|+||+++|++.......    .       
T Consensus       160 ~g~iV~isS~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~-------  227 (276)
T 2b4q_A          160 PARVINIGSV-AGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----P-------  227 (276)
T ss_dssp             CEEEEEECCG-GGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----H-------
T ss_pred             CCEEEEECCH-HHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----H-------
Confidence            2899999987 5666777777 9999999999999999999999999999999999999985321100    0       


Q ss_pred             HHHH-H--HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          259 PETV-A--RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       259 pe~~-a--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+.. .  ..+++++..|++++..+.||+++...+++|..+..+|++
T Consensus       228 ~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          228 QALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             HHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             HHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            0111 1  234566778888888888998887777777777777764

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.3e-41  Score=317.12  Aligned_cols=245  Identities=16%  Similarity=0.188  Sum_probs=205.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++.+.                .+.++.++++|
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D   68 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR----------------RPNSAITVQAD   68 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh----------------cCCeeEEEEee
Confidence            357899999999999999999999999999999999 9999888888777532                24578899999


Q ss_pred             CCCHH-----------------HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCC--------------HHHHHHHH
Q 017635          108 VCEPA-----------------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--------------NEEIEQIV  156 (368)
Q Consensus       108 v~~~~-----------------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--------------~~~~~~~~  156 (368)
                      ++|++                 +++++++++.+++|++|+||||||+.. ..++.+.+              .++|++++
T Consensus        69 l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (291)
T 1e7w_A           69 LSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLF  147 (291)
T ss_dssp             CSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHH
T ss_pred             cCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHH
Confidence            99999                 999999999999999999999999876 57778888              99999999


Q ss_pred             HhhchHHHHHHHHHHHHHHcCCC-----CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 017635          157 STNLVGSILCTREAMRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  231 (368)
Q Consensus       157 ~vN~~g~~~l~~~~lp~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~  231 (368)
                      ++|+.|++++++.++|+|++++.     .|+||++||. .+..+.++...|++||+++++|+++|+.|++++||+||+|+
T Consensus       148 ~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~  226 (291)
T 1e7w_A          148 GSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG  226 (291)
T ss_dssp             HHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEech-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEe
Confidence            99999999999999999987631     6899999998 56778889999999999999999999999999999999999


Q ss_pred             cCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh-hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          232 PGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       232 PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ||+|+|++ . . .   .....      ......+++ ++..|++++..+.||+++...+++|..+..||++.
T Consensus       227 PG~v~T~~-~-~-~---~~~~~------~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          227 PGLSVLVD-D-M-P---PAVWE------GHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             ESSBCCGG-G-S-C---HHHHH------HHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             eCCccCCc-c-C-C---HHHHH------HHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcc
Confidence            99999998 3 1 1   11100      111123455 67788888888899999888888888888888764

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-42  Score=321.17  Aligned_cols=246  Identities=23%  Similarity=0.345  Sum_probs=202.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~---~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .++++|++|||||++|||+++|++|+++|+   +|++++|+.++++++.+++.+..               .+.++.+++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~   93 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEF---------------PNAKVHVAQ   93 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHC---------------TTCEEEEEE
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhC---------------CCCeEEEEE
Confidence            357899999999999999999999999998   99999999999999888886632               246889999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      ||++|+++++++++++.+++|++|+||||||+..+..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        94 ~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~  172 (287)
T 3rku_A           94 LDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-NSGDIVN  172 (287)
T ss_dssp             CCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence            999999999999999999999999999999987545788899999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......           .++...+.
T Consensus       173 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~-----------~~~~~~~~  240 (287)
T 3rku_A          173 LGSI-AGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRG-----------NEEQAKNV  240 (287)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTT-----------CHHHHHHH
T ss_pred             ECCh-hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccC-----------cHHHHHHh
Confidence            9998 67788899999999999999999999999999999999999999999985321111           11111111


Q ss_pred             hh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .. .....|+|++..+.||+++...++++..+..+++.
T Consensus       241 ~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          241 YKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             HTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETTE
T ss_pred             hcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCCC
Confidence            10 01124566666667777776666666666655544

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.4e-41  Score=312.16  Aligned_cols=255  Identities=22%  Similarity=0.315  Sum_probs=208.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                .+.++.++++|+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~D~   66 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK----------------FGVRVLEVAVDV   66 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh----------------cCCceEEEEcCC
Confidence            5678999999999999999999999999999999999998888877777542                135688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|+++ +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  144 (263)
T 3ai3_A           67 ATPEGVDAVVESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRAR-GGGAIIHNAS  144 (263)
T ss_dssp             TSHHHHHHHHHHHHHHHSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECc
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999876 4799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH-H-Hh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-R-TL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~-~~  266 (368)
                      . ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|.|++....................+... . .+
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  223 (263)
T 3ai3_A          145 I-CAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP  223 (263)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT
T ss_pred             h-hhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC
Confidence            7 5667778889999999999999999999999999999999999999998542110000000000000001111 1 34


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..|+|++..+.||+++...+.++..+..+|++
T Consensus       224 ~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          224 IKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTC
T ss_pred             CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            566778889999999999887666677777777664

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.8e-41  Score=309.07  Aligned_cols=241  Identities=21%  Similarity=0.322  Sum_probs=196.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+. +++++   ++++                 .+.++.++++|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-----------------~~~~~~~~~~Dv   63 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRN-----------------LGRRVLTVKCDV   63 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHh-----------------cCCcEEEEEeec
Confidence            57899999999999999999999999999999999998 66554   3322                 235788899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        64 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  141 (249)
T 2ew8_A           64 SQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTS  141 (249)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCeEEEEEcc
Confidence            9999999999999999999999999999876 5778889999999999999999999999999999876 4799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc-cCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL-SGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~-~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      . ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++.. ...... .....       ... .++
T Consensus       142 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~-------~~~-~~~  211 (249)
T 2ew8_A          142 T-TYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAM-FDVLP-------NML-QAI  211 (249)
T ss_dssp             G-GGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------------CTT-SSS
T ss_pred             h-hhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccch-hhHHH-------Hhh-Ccc
Confidence            7 566777889999999999999999999999999999999999999999864 211000 00000       000 344


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..|++++..+.||+++...+++|..+..+|++
T Consensus       212 ~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          212 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             CCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            56678888888889999988777788888777765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=9.3e-42  Score=315.47  Aligned_cols=265  Identities=12%  Similarity=0.104  Sum_probs=215.0

Q ss_pred             CCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..                 ..+.++++|
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----------------~~~~~~~~D   64 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL-----------------NSPYVYELD   64 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT-----------------TCCCEEECC
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc-----------------CCcEEEEcC
Confidence            3678999999999  99999999999999999999999986 455555554421                 236789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.|+++++++++|.|++   +|+||
T Consensus        65 ~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv  141 (275)
T 2pd4_A           65 VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVL  141 (275)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEE
Confidence            999999999999999999999999999998652   256778999999999999999999999999999963   48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......  .....      ......
T Consensus       142 ~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~------~~~~~~  212 (275)
T 2pd4_A          142 TLSYL-GSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD--FRMIL------KWNEIN  212 (275)
T ss_dssp             EEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT--HHHHH------HHHHHH
T ss_pred             EEecc-hhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc--cHHHH------HHHHhc
Confidence            99997 5677788899999999999999999999999999999999999999998643211  00000      011123


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC--CCccccchhhhhhhhhhcc
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD--QGRALYAAEADRIRNWAEN  324 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~l~~w~~~  324 (368)
                      .+++++..|++++..+.|++++...+.+|..+..+|++...  .......+.+++||++.++
T Consensus       213 ~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          213 APLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHHSSC
T ss_pred             CCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcccCCCChhhcCcccchhhhhhhcc
Confidence            44566678888888888999888778888888888887442  2333455667889988764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.3e-41  Score=311.52  Aligned_cols=247  Identities=22%  Similarity=0.328  Sum_probs=205.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH--HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES--VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|++|||||++|||+++|++|+++|++|++++|+.++  +++..+++++                 .+.++.++++|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~~   64 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA-----------------ADQKAVFVGLDVTD   64 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT-----------------TTCCEEEEECCTTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh-----------------cCCcEEEEEccCCC
Confidence            6899999999999999999999999999999999887  6666666643                 23578899999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++++.+|+||++||. 
T Consensus        65 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-  142 (258)
T 3a28_C           65 KANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASI-  142 (258)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCG-
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcc-
Confidence            99999999999999999999999999876 5788889999999999999999999999999999876323899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC-CHH---HH-HHH
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPE---TV-ART  265 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~pe---~~-a~~  265 (368)
                      ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......    ........ .++   .. ...
T Consensus       143 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~  218 (258)
T 3a28_C          143 AAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDA----ELSKINGKPIGENFKEYSSSI  218 (258)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHH----HHHHHHCCCTTHHHHHHHTTC
T ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhh----hhccccCCchHHHHHHHHhcC
Confidence            5667788899999999999999999999999999999999999999998642110    00000000 011   11 123


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++++..|++++..+.||+++...+++|..+..+|++
T Consensus       219 p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          219 ALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             CCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence            4566778899999999999988878888888888775

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-41  Score=310.21  Aligned_cols=250  Identities=21%  Similarity=0.322  Sum_probs=206.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++|++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~~   64 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-----------------AGGHAVAVKVDVSDRD   64 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEecCCCHH
Confidence            58999999999999999999999999999999999888887777754                 2356888999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|++++..|+||++||. ++
T Consensus        65 ~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~-~~  142 (256)
T 1geg_A           65 QVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ-AG  142 (256)
T ss_dssp             HHHHHHHHHHHHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GG
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECch-hh
Confidence            999999999999999999999999876 5788889999999999999999999999999999876336899999987 56


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC-CHHHH-HHHhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE-LPETV-ARTLVPRI  270 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~pe~~-a~~~~~~~  270 (368)
                      ..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......... ........ ..+.. ...+++++
T Consensus       143 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~r~  221 (256)
T 1geg_A          143 HVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVS-EAAGKPLGYGTAEFAKRITLGRL  221 (256)
T ss_dssp             TSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHH-HHHTCCTTHHHHHHHTTCTTCSC
T ss_pred             cCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhcc-ccccCChHHHHHHHHhcCCCCCC
Confidence            67788899999999999999999999999999999999999999998542100000 00000000 00111 12345567


Q ss_pred             hhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          271 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..|++++..+.||+++...+++|..+..+|++
T Consensus       222 ~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          222 SEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             cCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            78889999999999988777888888887775

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-40  Score=298.72  Aligned_cols=211  Identities=24%  Similarity=0.366  Sum_probs=176.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.++.+|++|+
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~~~   61 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--------------------NAVIGIVADLAHH   61 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGEEEEECCTTSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--------------------CCceEEECCCCCH
Confidence            47999999999999999999999999999999999998887766651                    2588899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++  +++||++||. +
T Consensus        62 ~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~-~  137 (235)
T 3l6e_A           62 EDVDVAFAAAVEWGGLPELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGER--GGVLANVLSS-A  137 (235)
T ss_dssp             HHHHHHHHHHHHHHCSCSEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--CEEEEEECCE-E
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCH-H
Confidence            9999999999999999999999999976 6788899999999999999999999999999999876  3599999987 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      +..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++.........     ....+||++|+.++..+.
T Consensus       138 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-----~~~~~pedvA~~v~~l~~  212 (235)
T 3l6e_A          138 AQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDP-----SGFMTPEDAAAYMLDALE  212 (235)
T ss_dssp             CCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------CBCHHHHHHHHHHHTC
T ss_pred             hcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCCCCC-----cCCCCHHHHHHHHHHHHh
Confidence            778889999999999999999999999999999999999999999998754321110     112368888887776554

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.1e-39  Score=296.86  Aligned_cols=192  Identities=29%  Similarity=0.415  Sum_probs=177.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+                 .+.++.++++|++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~   66 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA-----------------AGAKVHVLELDVA   66 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEECCCC
Confidence            46889999999999999999999999999999999999988888777754                 2457889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ + |+||++||.
T Consensus        67 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~isS~  143 (247)
T 2jah_A           67 DRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRS-K-GTVVQMSSI  143 (247)
T ss_dssp             CHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-C-CEEEEEccH
Confidence            999999999999999999999999999876 5788899999999999999999999999999999876 3 999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...
T Consensus       144 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~  195 (247)
T 2jah_A          144 -AGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGH  195 (247)
T ss_dssp             -GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred             -HhcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence             5677788899999999999999999999999999999999999999998643

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=3.8e-42  Score=316.72  Aligned_cols=242  Identities=21%  Similarity=0.246  Sum_probs=200.4

Q ss_pred             ccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 017635           22 NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  101 (368)
Q Consensus        22 ~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v  101 (368)
                      ++.+.+.+++++|++|||||++|||+++|++|+++|++|++++|+.+.++                            ..
T Consensus        17 ~~~~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------------------------~~   68 (266)
T 3uxy_A           17 NLYFQSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------------------------AD   68 (266)
T ss_dssp             ---------CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------------------------CS
T ss_pred             CcchhhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------------------------hh
Confidence            44455567889999999999999999999999999999999999865421                            12


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          102 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       102 ~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      ..+.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|
T Consensus        69 ~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g  146 (266)
T 3uxy_A           69 LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGG  146 (266)
T ss_dssp             EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCE
T ss_pred             hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCc
Confidence            34589999999999999999999999999999999987 5788899999999999999999999999999999987 579


Q ss_pred             EEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          182 HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       182 ~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      +||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++........        ...+++
T Consensus       147 ~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~--------~~~~~~  217 (266)
T 3uxy_A          147 AIVNVASC-WGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKR--------GFDPDR  217 (266)
T ss_dssp             EEEEECCS-BTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHT--------TCCHHH
T ss_pred             EEEEECCH-HhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcc--------cccchH
Confidence            99999987 677888899999999999999999999999999999999999999999864321100        001111


Q ss_pred             -----HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 -----VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 -----~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                           ....+++++..|+|++..+.||+++...+++|..+..||++
T Consensus       218 ~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          218 AVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             HHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCE
Confidence                 12234567778899999999999999888888888888875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.3e-41  Score=313.53  Aligned_cols=249  Identities=21%  Similarity=0.293  Sum_probs=205.9

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ++..++++|++|||||++|||+++|++|+++|++|++++|+.+..                           ...+..++
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~---------------------------~~~~~~~~   59 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD---------------------------VNVSDHFK   59 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C---------------------------TTSSEEEE
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc---------------------------cCceeEEE
Confidence            455678999999999999999999999999999999999987542                           12456789


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||+
T Consensus        60 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~  137 (269)
T 3vtz_A           60 IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIIN  137 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEE
Confidence            9999999999999999999999999999999976 6788899999999999999999999999999999887 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhh-hcCCHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI-ICELPETVAR  264 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~~pe~~a~  264 (368)
                      +||. ++..+.+....|++||+|+++|+++++.|+++ ||+||+|+||+|+|++............... ..........
T Consensus       138 isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (269)
T 3vtz_A          138 IASV-QSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ  215 (269)
T ss_dssp             ECCG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH
T ss_pred             ECch-hhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc
Confidence            9997 67788889999999999999999999999998 8999999999999998643211000000000 0001122334


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      .+++++..|+|++..+.||+++...+++|..+..||++...
T Consensus       216 ~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  256 (269)
T 3vtz_A          216 HPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGLLSK  256 (269)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCcccc
Confidence            56677888999999999999999989999999999987543

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=2.6e-41  Score=309.92  Aligned_cols=254  Identities=18%  Similarity=0.183  Sum_probs=205.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....               .+.++.++.+|+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~D~   67 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLV---------------SGAQVDIVAGDI   67 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS---------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---------------CCCeEEEEEccC
Confidence            46789999999999999999999999999999999999988888777775310               123688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++| +|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.|+||++||
T Consensus        68 ~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS  144 (260)
T 2z1n_A           68 REPGDIDRLFEKARDLGG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEK-GWGRMVYIGS  144 (260)
T ss_dssp             TCHHHHHHHHHHHHHTTC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            999999999999999999 999999999876 5778889999999999999999999999999999876 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchh--hhhhhhcCCHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK--QMFNIICELPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~pe~~a~~~  266 (368)
                      . ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++..........  ...... .........+
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p  222 (260)
T 2z1n_A          145 V-TLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE-ALKSMASRIP  222 (260)
T ss_dssp             G-GGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------CCT
T ss_pred             h-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH-HHHHHHhcCC
Confidence            7 56777888999999999999999999999999999999999999999986421100000  000000 0001111234


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..|++++..+.||+++...+++|..+..+|++
T Consensus       223 ~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          223 MGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            566778889999999999988777778777777764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.2e-40  Score=301.08  Aligned_cols=221  Identities=23%  Similarity=0.289  Sum_probs=182.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...              ...++.++++|+
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv   68 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNK--------------HVQEPIVLPLDI   68 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCT--------------TSCCCEEEECCT
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcc--------------ccCcceEEeccC
Confidence            467899999999999999999999999999999999999999998888866321              125688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+++|++|+||||||+.. ..++ +.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        69 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS  145 (250)
T 3nyw_A           69 TDCTKADTEIKDIHQKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVAS  145 (250)
T ss_dssp             TCHHHHHHHHHHHHHHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEcc
Confidence            9999999999999999999999999999976 4666 78999999999999999999999999999877 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........    ....+||++|+.++.
T Consensus       146 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~----~~~~~p~dva~~v~~  220 (250)
T 3nyw_A          146 R-AAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGTPFKD----EEMIQPDDLLNTIRC  220 (250)
T ss_dssp             --------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTCCSCG----GGSBCHHHHHHHHHH
T ss_pred             H-HhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCCCccc----ccCCCHHHHHHHHHH
Confidence            7 45565556889999999999999999999999999999999999999987543211110    112357777776665


Q ss_pred             hhh
Q 017635          269 RIR  271 (368)
Q Consensus       269 ~~~  271 (368)
                      .+.
T Consensus       221 l~s  223 (250)
T 3nyw_A          221 LLN  223 (250)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.4e-41  Score=312.11  Aligned_cols=255  Identities=25%  Similarity=0.376  Sum_probs=210.3

Q ss_pred             ccc-CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           27 EHC-KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        27 ~~~-~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+| ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.
T Consensus        15 ~~m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~   77 (277)
T 2rhc_B           15 SHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-----------------AGVEADGRT   77 (277)
T ss_dssp             TTTCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEE
Confidence            344 68999999999999999999999999999999999999988887777754                 235688899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHH--HHcCCCCcEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV--MRDQPKGGHI  183 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~--m~~~~~~g~I  183 (368)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.  |+++ +.|+|
T Consensus        78 ~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~-~~g~i  155 (277)
T 2rhc_B           78 CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRI  155 (277)
T ss_dssp             CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHH-TEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhc-CCeEE
Confidence            9999999999999999999999999999999876 577888999999999999999999999999999  8876 46899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhh--hcCCHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI--ICELPET  261 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~pe~  261 (368)
                      |++||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++......... .....  .......
T Consensus       156 v~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~  233 (277)
T 2rhc_B          156 VNIAST-GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYS-DIWEVSTEEAFDRI  233 (277)
T ss_dssp             EEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHH-HHHTCCHHHHHHHH
T ss_pred             EEECcc-ccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcc-cccccchHHHHHHH
Confidence            999987 5667788889999999999999999999999999999999999999998532110000 00000  0000111


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ....+++++..++|++..+.||+++...++++..+..+|++
T Consensus       234 ~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~  274 (277)
T 2rhc_B          234 TARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL  274 (277)
T ss_dssp             HHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            12234566778899999999999988777788888777765

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.5e-40  Score=308.16  Aligned_cols=225  Identities=26%  Similarity=0.369  Sum_probs=194.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++++|++
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dv~   90 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG-----------------QGFDAHGVVCDVR   90 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCceEEEEccCC
Confidence            38899999999999999999999999999999999999999988888865                 3467899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+++|++|+||||||+.. ..++.+.+.+++++.+++|+.|+++++++++|.|++++.+|+||++||.
T Consensus        91 d~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  169 (301)
T 3tjr_A           91 HLDEMVRLADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF  169 (301)
T ss_dssp             CHHHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch
Confidence            999999999999999999999999999986 6788899999999999999999999999999999987447999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchh---------hhh-----hhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK---------QMF-----NII  255 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~---------~~~-----~~~  255 (368)
                       ++..+.++...|++||+|+++|+++|+.|++++||+|++|+||+|+|++..........         ..+     ...
T Consensus       170 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (301)
T 3tjr_A          170 -AGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDE  248 (301)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccC
Confidence             67788899999999999999999999999999999999999999999987532110000         000     001


Q ss_pred             cCCHHHHHHHhhhhhhhc
Q 017635          256 CELPETVARTLVPRIRVV  273 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~~~  273 (368)
                      ..+||++|+.++..+...
T Consensus       249 ~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          249 SVSADDVARLTADAILAN  266 (301)
T ss_dssp             CCCHHHHHHHHHHHHHHT
T ss_pred             CCCHHHHHHHHHHHHhcC
Confidence            237888888888777543

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-41  Score=315.13  Aligned_cols=252  Identities=21%  Similarity=0.258  Sum_probs=207.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+...              ...++.++.+|+
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~Dv   87 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--------------PAEKINAVVADV   87 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC--------------CCceEEEEecCC
Confidence            468899999999999999999999999999999999999988888777754200              012688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC--CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      +|+++++++++++.+++|++|+||||||+.. ..+  +.+.+.++|++.+++|+.|+++++++++|.|+++ + |+||++
T Consensus        88 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~-g~IV~i  164 (297)
T 1xhl_A           88 TEASGQDDIINTTLAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-K-GEIVNV  164 (297)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-T-CEEEEE
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-C-CEEEEE
Confidence            9999999999999999999999999999875 455  7889999999999999999999999999999876 3 999999


Q ss_pred             cCCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH---
Q 017635          187 DGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV---  262 (368)
Q Consensus       187 sS~~~~~~~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~---  262 (368)
                      ||. ++..+. ++...|++||+++++|+++++.|++++||+||+|+||+|+|++............ .    .++..   
T Consensus       165 sS~-~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-~----~~~~~~~~  238 (297)
T 1xhl_A          165 SSI-VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASD-K----LYSFIGSR  238 (297)
T ss_dssp             CCG-GGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHHC
T ss_pred             cCc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccccccccccc-c----hHHHHHHH
Confidence            987 455566 8889999999999999999999999999999999999999998643210000000 0    00000   


Q ss_pred             -HHHhhhhhhhcccccceeeeccCHH-HHHHHhhhhhcCCcee
Q 017635          263 -ARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  303 (368)
Q Consensus       263 -a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  303 (368)
                       ...+++++..|+++++.+.||+++. ..+++|..+..+|++.
T Consensus       239 ~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          239 KECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             TTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCcc
Confidence             1124556778889999999999988 7788888888888764

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-40  Score=302.28  Aligned_cols=231  Identities=20%  Similarity=0.245  Sum_probs=196.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.++++++.+++++.                ...+..++.+|
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~d   72 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA----------------GQPQPLIIALN   72 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------TSCCCEEEECC
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc----------------CCCCceEEEec
Confidence            45689999999999999999999999999999999999999999888888663                12345566666


Q ss_pred             C--CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          108 V--CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       108 v--~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +  +|.++++++++++.+++|++|+||||||+..+..++.+.+.++|++.+++|+.|++++++.++|+|+++ +.++||+
T Consensus        73 ~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~  151 (247)
T 3i1j_A           73 LENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRS-EDASIAF  151 (247)
T ss_dssp             TTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSEEEEE
T ss_pred             cccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCeEEE
Confidence            6  999999999999999999999999999986546788899999999999999999999999999999877 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      +||. .+..+.++...|++||+|+++|+++|+.|+++ +||+||+|+||+|+|++........          .      
T Consensus       152 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----------~------  214 (247)
T 3i1j_A          152 TSSS-VGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE----------N------  214 (247)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS----------C------
T ss_pred             Ecch-hhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc----------C------
Confidence            9987 57778889999999999999999999999987 8999999999999999864321110          0      


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhh
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVT  294 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  294 (368)
                        ..+...|+|++..+.||+++...+++|.
T Consensus       215 --~~~~~~p~dva~~~~~l~s~~~~~itG~  242 (247)
T 3i1j_A          215 --PLNNPAPEDIMPVYLYLMGPDSTGINGQ  242 (247)
T ss_dssp             --GGGSCCGGGGTHHHHHHHSGGGTTCCSC
T ss_pred             --ccCCCCHHHHHHHHHHHhCchhccccCe
Confidence              0123467888888888888876555444

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=1.8e-41  Score=312.51  Aligned_cols=245  Identities=20%  Similarity=0.299  Sum_probs=202.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++..                 .+.++.++.+|
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   83 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERD-----------------AGRDFKAYAVD   83 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHT-----------------TTCCCEEEECC
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----------------cCCceEEEEec
Confidence            346889999999999999999999999999999998 555556555555433                 34678999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+++|++|+||||||+.. ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.|+||++|
T Consensus        84 l~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~is  161 (269)
T 3gk3_A           84 VADFESCERCAEKVLADFGKVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVER-RFGRIVNIG  161 (269)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEeC
Confidence            99999999999999999999999999999987 5788899999999999999999999999999999877 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...........  .       .....+.
T Consensus       162 S~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~--~-------~~~~~~~  231 (269)
T 3gk3_A          162 SV-NGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEA--K-------ILPQIPV  231 (269)
T ss_dssp             CH-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------C--C-------SGGGCTT
T ss_pred             Ch-hhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHH--H-------hhhcCCc
Confidence            87 566778889999999999999999999999999999999999999999875432211100  0       0112334


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.||+++...+++|..+..||++
T Consensus       232 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          232 GRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             SSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTS
T ss_pred             CCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCE
Confidence            55667777888888888888777888888888765

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.2e-40  Score=304.64  Aligned_cols=244  Identities=16%  Similarity=0.171  Sum_probs=200.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|++|||||++|||+++|++|+++|  ++|++++|+.++++++.+++                    +.++.++++|++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~~   61 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY--------------------GDRFFYVVGDITE   61 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEESCTTS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh--------------------CCceEEEECCCCC
Confidence            6899999999999999999999985  78999999998877665543                    2468899999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++++.+++|++|+||||||+..+..++.+.+.++|++.+++|+.|+++++++++|+|+++  +|+||++||. 
T Consensus        62 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~--~g~iv~isS~-  138 (254)
T 3kzv_A           62 DSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKT--NGNVVFVSSD-  138 (254)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCS-
T ss_pred             HHHHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCeEEEEcCc-
Confidence            9999999999999999999999999986545788899999999999999999999999999999876  3899999997 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      ++..+.++...|++||+|+++|+++|+.|+  .||+||+|+||+|+|++.............. ...........+++++
T Consensus       139 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~r~  215 (254)
T 3kzv_A          139 ACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMS-AEQLKMFRGLKENNQL  215 (254)
T ss_dssp             CCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSC-HHHHHHHHHHHTTC--
T ss_pred             hhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccC-HHHHHHHHHHHhcCCc
Confidence            677888999999999999999999999998  5899999999999999975432211000000 0000122334567788


Q ss_pred             hhcccccceeeeccCHHH-HHHHhhhhhcCCce
Q 017635          271 RVVKGSGKAINYLTPPRI-LLALVTAWLRRGRW  302 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~g~~  302 (368)
                      ..|++++..+.||+++.. .+++|..+..+|..
T Consensus       216 ~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          216 LDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             --CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             CCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            899999999999999984 78888888777654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.3e-41  Score=311.23  Aligned_cols=248  Identities=22%  Similarity=0.262  Sum_probs=209.9

Q ss_pred             ccccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           26 EEHCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      .+.+++++|++|||||+  +|||+++|++|+++|++|++++|+.++. ++..+++.+.                .+.++.
T Consensus        13 ~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~----------------~~~~~~   76 (267)
T 3gdg_A           13 LDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT----------------YGIKAK   76 (267)
T ss_dssp             HHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH----------------HCCCEE
T ss_pred             ccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh----------------cCCcee
Confidence            44578999999999999  9999999999999999999999887655 6666676553                245788


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      ++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|+|+++ +.|+
T Consensus        77 ~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~  154 (267)
T 3gdg_A           77 AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKER-GTGS  154 (267)
T ss_dssp             CCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCE
T ss_pred             EEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHc-CCce
Confidence            9999999999999999999999999999999999987 5778899999999999999999999999999999987 5789


Q ss_pred             EEEEcCCCCCCCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH
Q 017635          183 IFNMDGAGSGGSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  260 (368)
Q Consensus       183 Iv~isS~~~~~~~~--~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  260 (368)
                      ||++||.. +..+.  +....|++||+|+++|+++++.|+++. |+||+|+||+|+|++.........          ..
T Consensus       155 iv~isS~~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~~~~~----------~~  222 (267)
T 3gdg_A          155 LVITASMS-GHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQ----------QL  222 (267)
T ss_dssp             EEEECCGG-GTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSCHHHH----------HH
T ss_pred             EEEEcccc-ccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCCHHHH----------HH
Confidence            99999873 44333  478899999999999999999999987 999999999999998753321110          11


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .....+++++..+++++..+.||+++...+++|..+..||++.
T Consensus       223 ~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          223 WHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred             HHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCcee
Confidence            1123456677788999999999999988888999998888874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=3.5e-41  Score=309.24  Aligned_cols=238  Identities=15%  Similarity=0.182  Sum_probs=185.0

Q ss_pred             ccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           24 VLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        24 ~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      .....|++++|++|||||++|||+++|++|+++|++|++++|+.+++.+.   +.+                   ..+.+
T Consensus        18 ~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~-------------------~~~~~   75 (260)
T 3gem_A           18 YFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQ-------------------AGAVA   75 (260)
T ss_dssp             ---------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHH-------------------HTCEE
T ss_pred             ccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHh-------------------cCCeE
Confidence            34456889999999999999999999999999999999999998765433   222                   13678


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +.+|++|+++++++++++.+++|++|+||||||+.. ..+ .+.+.++|++.+++|+.|+++++++++|+|+++ +.|+|
T Consensus        76 ~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~i  152 (260)
T 3gem_A           76 LYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWL-AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTAS-EVADI  152 (260)
T ss_dssp             EECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCC-CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEE
T ss_pred             EECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccC-CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEE
Confidence            999999999999999999999999999999999875 333 567889999999999999999999999999987 57999


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.++...|++||+|+++|+++++.|+++ +|+||+|+||+|+|++......            ......
T Consensus       153 v~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~~~~------------~~~~~~  218 (260)
T 3gem_A          153 VHISDD-VTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAY------------RANALA  218 (260)
T ss_dssp             EEECCG-GGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC--------------------------
T ss_pred             EEECCh-hhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCCHHH------------HHHHHh
Confidence            999987 57778889999999999999999999999998 6999999999999987532110            011122


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+++++..++|++..+.||+  ...+++|..+..||++
T Consensus       219 ~~p~~r~~~~edva~~v~~L~--~~~~itG~~i~vdGG~  255 (260)
T 3gem_A          219 KSALGIEPGAEVIYQSLRYLL--DSTYVTGTTLTVNGGR  255 (260)
T ss_dssp             -CCSCCCCCTHHHHHHHHHHH--HCSSCCSCEEEESTTT
T ss_pred             cCCCCCCCCHHHHHHHHHHHh--hCCCCCCCEEEECCCc
Confidence            344556666777777777776  3445667777777765

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=6.5e-41  Score=311.40  Aligned_cols=260  Identities=16%  Similarity=0.182  Sum_probs=203.5

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+..                 ..+.++++|+
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~-----------------~~~~~~~~Dl   80 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF-----------------GSDLVVKCDV   80 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT-----------------TCCCEEECCT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc-----------------CCeEEEEcCC
Confidence            789999999999  99999999999999999999999985 445555554421                 2367899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|+++++++++++.+++|++|+||||||+...   ..++.+.+.+++++.+++|+.|+++++++++|.|+++  +|+||+
T Consensus        81 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~  158 (285)
T 2p91_A           81 SLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVT  158 (285)
T ss_dssp             TCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEE
Confidence            99999999999999999999999999998652   1567789999999999999999999999999999754  589999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......  .....      .......
T Consensus       159 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~------~~~~~~~  229 (285)
T 2p91_A          159 LSYY-GAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG--FHLLM------EHTTKVN  229 (285)
T ss_dssp             EECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT--HHHHH------HHHHHHS
T ss_pred             Eccc-hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc--hHHHH------HHHHhcC
Confidence            9987 5667778889999999999999999999999999999999999999998543211  00100      0111233


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCCCccccchhhhhhh
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAAEADRIR  319 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~  319 (368)
                      +++++..|++++..+.|++++...+.+|..+..+|++..........+..++||
T Consensus       230 p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg~~~~~~~~~~~~~~~~lw  283 (285)
T 2p91_A          230 PFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHIMGVFGREEEIKKEVY  283 (285)
T ss_dssp             TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGBSCC-----------
T ss_pred             CCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccccccCChHHHHHHhc
Confidence            456677888888888999988877788888888888754433333333444444

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=3.2e-41  Score=310.53  Aligned_cols=245  Identities=18%  Similarity=0.272  Sum_probs=207.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..++.+|++|||||++|||+++|++|+++|++|++ ..|+.+++++..+++.+                 .+.++.++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   83 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVA-----------------NGGNGRLLSF   83 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-----------------cCCceEEEEe
Confidence            34678899999999999999999999999999966 56778888888777765                 3467889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|.|.++.+.++||++
T Consensus        84 Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i  162 (267)
T 4iiu_A           84 DVANREQCREVLEHEIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITL  162 (267)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            999999999999999999999999999999987 5788889999999999999999999999999999744468999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++...|++||+|+++|+++++.|++++||+|++|+||+|+|++.....    ...       .+.....+
T Consensus       163 sS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~-------~~~~~~~p  230 (267)
T 4iiu_A          163 SSV-SGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEE----SAL-------KEAMSMIP  230 (267)
T ss_dssp             CCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCH----HHH-------HHHHHTCT
T ss_pred             cch-HhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccH----HHH-------HHHHhcCC
Confidence            987 566778889999999999999999999999999999999999999999875321    110       12223344


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..++|++..+.||+++...+++|..+..||++
T Consensus       231 ~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          231 MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCCc
Confidence            566778888899999999998888888888888875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-41  Score=308.19  Aligned_cols=248  Identities=23%  Similarity=0.282  Sum_probs=201.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++.+|++|||||++|||+++|++|+++|++|++++|+.+...+...++.+.                .+.++.++++|+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   66 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD----------------VEERLQFVQADV   66 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG----------------GGGGEEEEECCT
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh----------------cCCceEEEEecC
Confidence            3456799999999999999999999999999999988765544333333221                245789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCC--CCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGT--NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~--~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      +|+++++++++++.+++|++|+||||||+  .. ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.++||++
T Consensus        67 ~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~i  144 (264)
T 3i4f_A           67 TKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFE-RKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINY  144 (264)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCS-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccccC-CCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEE
Confidence            99999999999999999999999999994  33 4678889999999999999999999999999999887 57999999


Q ss_pred             cCCCCC-CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          187 DGAGSG-GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       187 sS~~~~-~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      ||.... ..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|.|++.......    ...      ......
T Consensus       145 ss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~------~~~~~~  214 (264)
T 3i4f_A          145 GFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQE----ARQ------LKEHNT  214 (264)
T ss_dssp             CCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHH----HHH------C-----
T ss_pred             eechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHH----HHH------HHhhcC
Confidence            987434 667778899999999999999999999999999999999999999987543211    111      011234


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +++++..++|+++.+.||+++...+++|..+..+|++..
T Consensus       215 p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~~~  253 (264)
T 3i4f_A          215 PIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAVDV  253 (264)
T ss_dssp             ---CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred             CCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCceee
Confidence            566777888899999999999888889999999988743

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=6e-41  Score=306.54  Aligned_cols=240  Identities=28%  Similarity=0.370  Sum_probs=199.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++.+|++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   61 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------------------GDAARYQHLDVT   61 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------------------GGGEEEEECCTT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------CCceeEEEecCC
Confidence            467899999999999999999999999999999999988776654443                    245788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.|+||++||.
T Consensus        62 ~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  139 (254)
T 1hdc_A           62 IEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSA  139 (254)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECch
Confidence            999999999999999999999999999876 5778889999999999999999999999999999876 47999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++...........+.          ...++++
T Consensus       140 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----------~~~p~~~  208 (254)
T 1hdc_A          140 -AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNY----------PNTPMGR  208 (254)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSC----------TTSTTSS
T ss_pred             -hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHH----------hcCCCCC
Confidence             56677888999999999999999999999999999999999999999986431110000000          0123344


Q ss_pred             hh-hcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          270 IR-VVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       270 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +. .|++++..+.||+++...++++..+..+|++
T Consensus       209 ~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  242 (254)
T 1hdc_A          209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGW  242 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            55 6677777777888877767777777777765

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=8.2e-41  Score=311.16  Aligned_cols=247  Identities=19%  Similarity=0.220  Sum_probs=200.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+. ++++++.+++.+.                .+.++.+++
T Consensus        17 ~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~----------------~~~~~~~~~   80 (288)
T 2x9g_A           17 RGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE----------------RSNTAVVCQ   80 (288)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEE
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh----------------cCCceEEEE
Confidence            45568899999999999999999999999999999999998 8888777777532                345788999


Q ss_pred             ccCCC----HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCC-----CC-----CCHHHHHHHHHhhchHHHHHHHHHH
Q 017635          106 CDVCE----PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-----LQ-----FTNEEIEQIVSTNLVGSILCTREAM  171 (368)
Q Consensus       106 ~Dv~~----~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-----~~-----~~~~~~~~~~~vN~~g~~~l~~~~l  171 (368)
                      +|++|    .++++++++++.+++|++|+||||||+.. ..++     .+     .+.++|++.+++|+.|++++++.++
T Consensus        81 ~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  159 (288)
T 2x9g_A           81 ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFA  159 (288)
T ss_dssp             CCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             eecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence            99999    99999999999999999999999999876 4555     56     8889999999999999999999999


Q ss_pred             HHHHcCCC-----CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc
Q 017635          172 RVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI  246 (368)
Q Consensus       172 p~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~  246 (368)
                      |.|++++.     .|+||++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++ . ..  
T Consensus       160 ~~~~~~~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~~--  234 (288)
T 2x9g_A          160 QRQKGTNPNCTSSNLSIVNLCDA-MVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-MG--  234 (288)
T ss_dssp             HHC--------CCCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-SC--
T ss_pred             HHHhhcCCCCCCCCeEEEEEecc-cccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-cC--
Confidence            99987621     6899999987 5677888899999999999999999999999999999999999999998 3 11  


Q ss_pred             chhhhhhhhcCCHHHHHHHhhhhh-hhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          247 QNKQMFNIICELPETVARTLVPRI-RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       247 ~~~~~~~~~~~~pe~~a~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                       ....       .......+++++ ..|++++..+.||+++...+++|..+..+|++.
T Consensus       235 -~~~~-------~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          235 -EEEK-------DKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             -HHHH-------HHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             -hHHH-------HHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence             1100       011112345566 678888888899999888888888888888763

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7e-41  Score=310.38  Aligned_cols=252  Identities=21%  Similarity=0.247  Sum_probs=206.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+...              ...++.++++|++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dv~   68 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--------------SEKQVNSVVADVT   68 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------CCcceEEEEecCC
Confidence            47899999999999999999999999999999999999988877777653100              0126889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC----CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      |+++++++++++.+++|++|+||||||+.. ..+    +.+.+.++|++.+++|+.+++++++.++|.|+++ + |+||+
T Consensus        69 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~-g~iv~  145 (280)
T 1xkq_A           69 TEDGQDQIINSTLKQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-K-GEIVN  145 (280)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcC-C-CcEEE
Confidence            999999999999999999999999999875 355    7788999999999999999999999999999876 3 89999


Q ss_pred             EcCCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH--
Q 017635          186 MDGAGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV--  262 (368)
Q Consensus       186 isS~~~~~~~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~--  262 (368)
                      +||. ++..+. ++...|++||+++++|+++++.|++++||+||+|+||+|+|++............ .    .++..  
T Consensus       146 isS~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~----~~~~~~~  219 (280)
T 1xkq_A          146 VSSI-VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQ-K----FYNFMAS  219 (280)
T ss_dssp             ECCG-GGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHH-H----HHHHHHH
T ss_pred             ecCc-cccCCCCCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccccccccccc-c----hHHHHHH
Confidence            9987 455565 8889999999999999999999999999999999999999998643210000000 0    00111  


Q ss_pred             --HHHhhhhhhhcccccceeeeccCHH-HHHHHhhhhhcCCceec
Q 017635          263 --ARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWFD  304 (368)
Q Consensus       263 --a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~~  304 (368)
                        ...+++++..|+++++.+.||+++. ..++++..+..+|++..
T Consensus       220 ~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~~  264 (280)
T 1xkq_A          220 HKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL  264 (280)
T ss_dssp             CTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCCccc
Confidence              1124556778889999999999988 77888888888887643

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.9e-41  Score=307.70  Aligned_cols=238  Identities=26%  Similarity=0.351  Sum_probs=194.8

Q ss_pred             ccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 017635           22 NMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  101 (368)
Q Consensus        22 ~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v  101 (368)
                      ++.+.+.|++++|++|||||++|||+++|++|+++|++|++++|+.++.                          ...++
T Consensus        17 ~~~~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------------------~~~~~   70 (260)
T 3un1_A           17 NLYFQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS--------------------------ADPDI   70 (260)
T ss_dssp             ---CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC--------------------------SSTTE
T ss_pred             hhhhhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc--------------------------ccCce
Confidence            3344555778999999999999999999999999999999999986532                          12368


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          102 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       102 ~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                      .++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|
T Consensus        71 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g  148 (260)
T 3un1_A           71 HTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSG  148 (260)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCE
T ss_pred             EEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCc
Confidence            88999999999999999999999999999999999987 5788899999999999999999999999999999987 579


Q ss_pred             EEEEEcCCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH
Q 017635          182 HIFNMDGAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  260 (368)
Q Consensus       182 ~Iv~isS~~~~~-~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  260 (368)
                      +||++||..... .+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.....   .          ..
T Consensus       149 ~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~---~----------~~  215 (260)
T 3un1_A          149 HIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAET---H----------ST  215 (260)
T ss_dssp             EEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGG---H----------HH
T ss_pred             EEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHH---H----------HH
Confidence            999999873321 334556899999999999999999999999999999999999999864211   0          01


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .....+++++..++|++.++.||  +...+++|..+..||++
T Consensus       216 ~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~~i~vdGG~  255 (260)
T 3un1_A          216 LAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEILHVDGGQ  255 (260)
T ss_dssp             HHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCEEEESTTG
T ss_pred             HhccCCCCCCcCHHHHHHHHHHh--cccCCCCCcEEEECCCe
Confidence            11123455666777777777777  45556677777777765

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=4.8e-39  Score=295.22  Aligned_cols=220  Identities=26%  Similarity=0.361  Sum_probs=183.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+                 .+.++.++.+|
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   86 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA-----------------AGGEAESHACD   86 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------hCCceeEEEec
Confidence            3468899999999999999999999999999999999999999888888765                 34688999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+++|++|+||||||+.....++.+.+.+++++.+++|+.|++++++.++|+|+++ +.|+||++|
T Consensus        87 ~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~is  165 (262)
T 3rkr_A           87 LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAA-KRGHIINIS  165 (262)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCCEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCceEEEEe
Confidence            9999999999999999999999999999984435788899999999999999999999999999999887 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.++...|++||+|+++|+++++.|++++||+|++|+||+|+|++........    .......|+++|+.++
T Consensus       166 S~-~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~p~dvA~~v~  240 (262)
T 3rkr_A          166 SL-AGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSAKK----SALGAIEPDDIADVVA  240 (262)
T ss_dssp             SS-CSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCCHHHHHHHHH
T ss_pred             ch-hhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccccc----ccccCCCHHHHHHHHH
Confidence            98 677888899999999999999999999999999999999999999999865422111    0111125777776665


Q ss_pred             hhh
Q 017635          268 PRI  270 (368)
Q Consensus       268 ~~~  270 (368)
                      ..+
T Consensus       241 ~l~  243 (262)
T 3rkr_A          241 LLA  243 (262)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            444

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-41  Score=313.27  Aligned_cols=249  Identities=18%  Similarity=0.218  Sum_probs=200.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC------------hHHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS------------SESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+            .+++++...++..                 
T Consensus         6 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------   68 (287)
T 3pxx_A            6 GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK-----------------   68 (287)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHH-----------------
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHh-----------------
Confidence            46899999999999999999999999999999999998            6666666666654                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++++|++|.++++++++++.+++|++|+||||||+.. ..  .+.+.++|++.+++|+.|+++++++++|+|. 
T Consensus        69 ~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-  144 (287)
T 3pxx_A           69 TGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICP-LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT-  144 (287)
T ss_dssp             TTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-
T ss_pred             cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCc-cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-
Confidence            3467899999999999999999999999999999999999875 23  3478899999999999999999999999993 


Q ss_pred             CCCCcEEEEEcCCCCCCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcc
Q 017635          177 QPKGGHIFNMDGAGSGGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST  245 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~~~-----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~  245 (368)
                        ++++||++||. ++..+.           ++...|++||+++++|+++++.|++++||+||+|+||+|+|++......
T Consensus       145 --~~g~iv~isS~-~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~  221 (287)
T 3pxx_A          145 --SGASIITTGSV-AGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM  221 (287)
T ss_dssp             --TTCEEEEECCH-HHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH
T ss_pred             --cCcEEEEeccc-hhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch
Confidence              46899999986 333222           5667899999999999999999999999999999999999998753211


Q ss_pred             cchhhhhh-hhcCCHHHHHHH------hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          246 IQNKQMFN-IICELPETVART------LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       246 ~~~~~~~~-~~~~~pe~~a~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .  ..+.. ......+.....      +-.++..|+|++.++.||+++...+++|..+..||++.
T Consensus       222 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          222 Y--RQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             H--HHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             h--hhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhh
Confidence            0  00000 000011111110      01456678899999999999999999999999988864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.8e-40  Score=316.35  Aligned_cols=196  Identities=23%  Similarity=0.369  Sum_probs=176.4

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-------HHHHHHHHHHHhhhhhhhcCCCCccccc
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-------VRMTVTELEENLKEGMMAAGGSSKKNLV   97 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (368)
                      +....++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++++                 .
T Consensus        37 ~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~-----------------~   99 (346)
T 3kvo_A           37 LPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEA-----------------V   99 (346)
T ss_dssp             CCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHH-----------------T
T ss_pred             CccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHh-----------------c
Confidence            445678899999999999999999999999999999999999775       4555566554                 4


Q ss_pred             CceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635           98 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus        98 ~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      +.++.++++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++
T Consensus       100 g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  178 (346)
T 3kvo_A          100 GGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKS  178 (346)
T ss_dssp             TCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTC
T ss_pred             CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC
Confidence            568999999999999999999999999999999999999986 6888999999999999999999999999999999987


Q ss_pred             CCCcEEEEEcCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc-ccCcccc
Q 017635          178 PKGGHIFNMDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM-VLTDLLL  241 (368)
Q Consensus       178 ~~~g~Iv~isS~~~~~~~--~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~-v~T~~~~  241 (368)
                       +.|+||++||. .+..+  .+....|++||+++++|+++|+.|++ .||+||+|+||+ ++|++..
T Consensus       179 -~~g~IV~iSS~-~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~  242 (346)
T 3kvo_A          179 -KVAHILNISPP-LNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMD  242 (346)
T ss_dssp             -SSCEEEEECCC-CCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHH
T ss_pred             -CCCEEEEECCH-HHcCCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHH
Confidence             57999999987 45555  67889999999999999999999999 899999999995 9998764

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=1.9e-40  Score=307.87  Aligned_cols=250  Identities=21%  Similarity=0.274  Sum_probs=204.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+                 .+.++.++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~   86 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-----------------NGSDAACVKA   86 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHH-----------------hCCCeEEEEc
Confidence            457889999999999999999999999999999999998754 4555555544                 3457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+   +.|+||++
T Consensus        87 D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~g~iv~i  162 (283)
T 1g0o_A           87 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE---IGGRLILM  162 (283)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC---TTCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh---cCCeEEEE
Confidence            999999999999999999999999999999876 57788899999999999999999999999999992   46899999


Q ss_pred             cCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH---HH
Q 017635          187 DGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE---TV  262 (368)
Q Consensus       187 sS~~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe---~~  262 (368)
                      ||. ++..+.+ ....|++||+++++|+++++.|++++||+||+|+||+|+|++..........   ......++   ..
T Consensus       163 sS~-~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~  238 (283)
T 1g0o_A          163 GSI-TGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIP---NGENLSNEEVDEY  238 (283)
T ss_dssp             CCG-GGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGST---TCTTCCHHHHHHH
T ss_pred             ech-hhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccc---cccccCHHHHHHH
Confidence            987 4555544 4889999999999999999999999999999999999999986431100000   00000111   11


Q ss_pred             H---HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 A---RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .   ..+++++..|++++..+.||+++...+++|..+..+|++
T Consensus       239 ~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          239 AAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             HHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            1   234567778899999999999998878888888887765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=8.4e-41  Score=305.63  Aligned_cols=245  Identities=25%  Similarity=0.340  Sum_probs=200.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+  ++..+++.+                 .+.++.++.+|++|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~-----------------~~~~~~~~~~D~~~   62 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR-----------------HGVKAVHHPADLSD   62 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT-----------------TSCCEEEECCCTTS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh-----------------cCCceEEEeCCCCC
Confidence            57899999999999999999999999999999999876  444444432                 23568889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      +++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.++||++||. 
T Consensus        63 ~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-  139 (255)
T 2q2v_A           63 VAQIEALFALAEREFGGVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRAR-NWGRIINIASV-  139 (255)
T ss_dssp             HHHHHHHHHHHHHHHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCG-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcCc-
Confidence            99999999999999999999999999876 5778889999999999999999999999999999887 57999999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH----HHH--HH
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP----ETV--AR  264 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p----e~~--a~  264 (368)
                      ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++....... ....    ...+    +..  ..
T Consensus       140 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~  214 (255)
T 2q2v_A          140 HGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDD-RAAN----GGDPLQAQHDLLAEK  214 (255)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHH-HHHH----TCCHHHHHHHHHTTT
T ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccc-cccc----ccchHHHHHHHHhcc
Confidence            56677888999999999999999999999999999999999999999985421100 0000    0001    110  11


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++.++..|+|++..+.||+++...++++..+..+|++
T Consensus       215 ~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  252 (255)
T 2q2v_A          215 QPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW  252 (255)
T ss_dssp             CTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence            23456677888888899999887767777777777765

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2.4e-40  Score=304.28  Aligned_cols=249  Identities=17%  Similarity=0.171  Sum_probs=207.0

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+.+..+. .+++.+..               ...++.++++
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~---------------~~~~~~~~~~   66 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKS-VHELAGTL---------------DRNDSIILPC   66 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHTS---------------SSCCCEEEEC
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHH-HHHHHHhc---------------CCCCceEEeC
Confidence            56889999999999  679999999999999999999999654443 33333321               1237889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |++|.++++++++++.+++|++|+||||||+..+   ..++.+.+.+++++.+++|+.+++.+++.++|+|++   +|+|
T Consensus        67 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~i  143 (266)
T 3oig_A           67 DVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSI  143 (266)
T ss_dssp             CCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceE
Confidence            9999999999999999999999999999998652   367788999999999999999999999999999863   5899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.+....|++||+|+++|+++|+.|++++||+||+|+||+|+|++.......  ...      ......
T Consensus       144 v~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~------~~~~~~  214 (266)
T 3oig_A          144 VTLTYL-GGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDF--NSI------LKDIEE  214 (266)
T ss_dssp             EEEECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTH--HHH------HHHHHH
T ss_pred             EEEecc-cccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccch--HHH------HHHHHh
Confidence            999997 67788899999999999999999999999999999999999999999987543211  010      012223


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      ..++++...|+++++.+.||+++...+++|..+..||+|...
T Consensus       215 ~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          215 RAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCeEEe
Confidence            445567778888899999999998888889999888888543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-40  Score=304.82  Aligned_cols=255  Identities=20%  Similarity=0.268  Sum_probs=196.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+...              .+.++.++++|++
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D~~   68 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--------------SEQNVNSVVADVT   68 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccc--------------CCCceeEEecccC
Confidence            46889999999999999999999999999999999999888877776632100              2356889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCC----CHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF----TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      |+++++++++++.+++|++|+||||||... ..++.+.    +.++|++.+++|+.|+++++++++|.|+++ + |+||+
T Consensus        69 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~-g~iv~  145 (278)
T 1spx_A           69 TDAGQDEILSTTLGKFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-K-GEIVN  145 (278)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-T-CEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-C-CeEEE
Confidence            999999999999999999999999999876 4667777    999999999999999999999999999876 3 89999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||..+...+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++........ .................
T Consensus       146 isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~  224 (278)
T 1spx_A          146 ISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPE-ETSKKFYSTMATMKECV  224 (278)
T ss_dssp             ECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHC
T ss_pred             EecccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCc-hhhhhhhHHHHHHHhcC
Confidence            99984326778888999999999999999999999999999999999999999864321000 00000000000111223


Q ss_pred             hhhhhhhcccccceeeeccCHHHHH-HHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILL-ALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~g~~  302 (368)
                      ++.++..|++++..+.||+++...+ ++|..+..+|++
T Consensus       225 p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~  262 (278)
T 1spx_A          225 PAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS  262 (278)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             CCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCc
Confidence            4566778899999999999987765 777777777765

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5e-41  Score=309.88  Aligned_cols=246  Identities=24%  Similarity=0.331  Sum_probs=203.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                     ..+.++++|+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~Dv   63 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------------------PGAVFILCDV   63 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------------TTEEEEECCT
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---------------------cCCeEEEcCC
Confidence            4578999999999999999999999999999999999988776554432                     1367899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||......++.+.+.++|++.+++|+.|+++++++++|+|+++  .|+||++||
T Consensus        64 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS  141 (270)
T 1yde_A           64 TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISS  141 (270)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcC
Confidence            999999999999999999999999999986534678889999999999999999999999999999764  589999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|.|++............ ..   ..+.....+++
T Consensus       142 ~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~-~~---~~~~~~~~p~~  216 (270)
T 1yde_A          142 L-VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR-AS---IREGMLAQPLG  216 (270)
T ss_dssp             H-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH-HH---HHHHHHTSTTS
T ss_pred             c-cccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchH-HH---HHHHhhcCCCC
Confidence            6 4556677889999999999999999999999999999999999999998532110000000 00   00111234567


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++..|+|++..+.||+++ ..+++|..+..+|++.
T Consensus       217 r~~~p~dva~~v~~L~s~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          217 RMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             SCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             CCcCHHHHHHHHHHHccc-CCCcCCCEEEECCCee
Confidence            778899999999999987 5678888888888763

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-40  Score=302.15  Aligned_cols=242  Identities=21%  Similarity=0.280  Sum_probs=197.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++ ++..+++                   .  + .++++|+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-------------------~--~-~~~~~D~   58 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-------------------G--G-AFFQVDL   58 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-------------------T--C-EEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-------------------h--C-CEEEeeC
Confidence            35789999999999999999999999999999999999876 5444433                   1  3 6789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        59 ~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS  136 (256)
T 2d1y_A           59 EDERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVAS  136 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            9999999999999999999999999999876 5778899999999999999999999999999999887 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcc--cchhhhhhhhcCCHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST--IQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      . ++..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++......  ......      ........+
T Consensus       137 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~------~~~~~~~~~  209 (256)
T 2d1y_A          137 V-QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERT------RRDWEDLHA  209 (256)
T ss_dssp             G-GGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------------CHHHHTTST
T ss_pred             c-cccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHH------HHHHHhcCC
Confidence            7 5677788899999999999999999999999999999999999999998532100  000000      011111223


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..++|++..+.|++++...+.++..+..+|++
T Consensus       210 ~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG~  245 (256)
T 2d1y_A          210 LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGGM  245 (256)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCCc
Confidence            455667788888888888877666667666666654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.4e-40  Score=305.55  Aligned_cols=251  Identities=22%  Similarity=0.275  Sum_probs=204.3

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.+++
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~   64 (263)
T 3ak4_A            5 AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--------------------NGGFAVE   64 (263)
T ss_dssp             -CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT--------------------TCCEEEE
T ss_pred             ccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--------------------cCCeEEE
Confidence            34467889999999999999999999999999999999999887665544321                    2567899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++++..++||+
T Consensus        65 ~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~  143 (263)
T 3ak4_A           65 VDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVN  143 (263)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred             EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            9999999999999999999999999999999876 577888999999999999999999999999999988733699999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCC-HH---H
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-PE---T  261 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-pe---~  261 (368)
                      +||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++.......    ........ ++   .
T Consensus       144 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~  218 (263)
T 3ak4_A          144 TASL-AAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIW----EAELRGMTPEAVRAE  218 (263)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHH----HHHHHTSCHHHHHHH
T ss_pred             eccc-ccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccc----cccccccCcHHHHHH
Confidence            9987 56677788899999999999999999999999999999999999999985321100    00000000 11   1


Q ss_pred             -HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 -VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 -~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                       ....+++++..|+|++..+.||+++...++++..+..+|++
T Consensus       219 ~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  260 (263)
T 3ak4_A          219 YVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV  260 (263)
T ss_dssp             HHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             HHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence             11234556778888999999999887777777777777765

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.7e-39  Score=296.72  Aligned_cols=188  Identities=24%  Similarity=0.346  Sum_probs=170.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++.+|++|||||++|||+++|++|+++|++|++++|+.+++++.                       ...++.++++|++
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~Dv~   69 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-----------------------NLPNTLCAQVDVT   69 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-----------------------CCTTEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-----------------------hcCCceEEEecCC
Confidence            46789999999999999999999999999999999998765421                       1235788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||.
T Consensus        70 d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~IV~isS~  147 (266)
T 3p19_A           70 DKYTFDTAITRAEKIYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKAR-NCGTIINISSI  147 (266)
T ss_dssp             CHHHHHHHHHHHHHHHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcCh
Confidence            999999999999999999999999999987 6788899999999999999999999999999999887 57999999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccC
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG  243 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~  243 (368)
                       ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++....
T Consensus       148 -~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~  200 (266)
T 3p19_A          148 -AGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHT  200 (266)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred             -hhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcc
Confidence             67788889999999999999999999999999999999999999999987543

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-40  Score=313.65  Aligned_cols=243  Identities=16%  Similarity=0.193  Sum_probs=204.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++|++|||||++|||+++|++|+++|++|++++ |+.++++++.+++...                .+.++.++++|++
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl~  107 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR----------------RPNSAITVQADLS  107 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCS
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh----------------cCCeEEEEEeeCC
Confidence            7899999999999999999999999999999999 9999888888777532                2357889999999


Q ss_pred             CHH-----------------HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCC--------------HHHHHHHHHh
Q 017635          110 EPA-----------------DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT--------------NEEIEQIVST  158 (368)
Q Consensus       110 ~~~-----------------~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~--------------~~~~~~~~~v  158 (368)
                      |.+                 +++++++++.+++|++|+||||||+.. ..++.+.+              .++|++.+++
T Consensus       108 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~v  186 (328)
T 2qhx_A          108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGS  186 (328)
T ss_dssp             SSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHH
T ss_pred             CchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHH
Confidence            999                 999999999999999999999999876 56777888              8999999999


Q ss_pred             hchHHHHHHHHHHHHHHcCCC-----CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 017635          159 NLVGSILCTREAMRVMRDQPK-----GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG  233 (368)
Q Consensus       159 N~~g~~~l~~~~lp~m~~~~~-----~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG  233 (368)
                      |+.|+++++++++|.|++++.     .++||++||. .+..+.++...|++||+++++|+++|+.|++++||+||+|+||
T Consensus       187 N~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG  265 (328)
T 2qhx_A          187 NAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG  265 (328)
T ss_dssp             HTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECch-hhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence            999999999999999987631     6899999998 5677788899999999999999999999999999999999999


Q ss_pred             cccCcccccCcccchhhhhhhhcCCHHHHHHHhhh-hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          234 MVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       234 ~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+|++ .. ..    ...      .......+++ ++..|++++..+.||+++...+++|..+..||++.
T Consensus       266 ~v~T~~-~~-~~----~~~------~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          266 LSVLVD-DM-PP----AVW------EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             SBSCCC-CS-CH----HHH------HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             cccCCc-cc-cH----HHH------HHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence            999998 32 11    110      0111123445 66778888888889999888788888888888763

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-40  Score=305.07  Aligned_cols=238  Identities=23%  Similarity=0.299  Sum_probs=197.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++                    ..++.++++|++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL--------------------EAEAIAVVADVS   62 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC--------------------CSSEEEEECCTT
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--------------------cCceEEEEcCCC
Confidence            468999999999999999999999999999999999988776554432                    136788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+| ++  .|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~  138 (263)
T 2a4k_A           63 DPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSV  138 (263)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecc
Confidence            999999999999999999999999999876 5778889999999999999999999999999999 43  6899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++. +.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......    ...      .......++++
T Consensus       139 -~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~------~~~~~~~p~~~  206 (263)
T 2a4k_A          139 -AGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPP----WAW------EQEVGASPLGR  206 (263)
T ss_dssp             -TTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH----HHH------HHHHHTSTTCS
T ss_pred             -hhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCH----HHH------HHHHhcCCCCC
Confidence             454 667788999999999999999999999999999999999999998643211    100      01112234556


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..|+++++.+.|++++...++++..+..+|++.
T Consensus       207 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          207 AGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  240 (263)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhCccccCCcCCEEEECCCcc
Confidence            6778888888888888887778888888887763

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.6e-41  Score=309.41  Aligned_cols=239  Identities=23%  Similarity=0.238  Sum_probs=186.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|++++|++|||||++|||+++|++|+++|++|++++|+.++..   ++                    .+.++.++++|
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D   60 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---AD--------------------LGDRARFAAAD   60 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HH--------------------TCTTEEEEECC
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---Hh--------------------cCCceEEEECC
Confidence            36788999999999999999999999999999999999755432   11                    23568899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-------
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-------  177 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-------  177 (368)
                      ++|+++++++++.+.+ +|++|+||||||+....   .+..+.+.++|++.+++|+.|+++++++++|+|+++       
T Consensus        61 ~~~~~~v~~~~~~~~~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~  139 (257)
T 3tl3_A           61 VTDEAAVASALDLAET-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNA  139 (257)
T ss_dssp             TTCHHHHHHHHHHHHH-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CC
T ss_pred             CCCHHHHHHHHHHHHH-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhccccccc
Confidence            9999999999998877 99999999999986411   122358999999999999999999999999999872       


Q ss_pred             CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC
Q 017635          178 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  257 (368)
Q Consensus       178 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  257 (368)
                      .+.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........        
T Consensus       140 ~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~--------  210 (257)
T 3tl3_A          140 EERGVIINTASV-AAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARA--------  210 (257)
T ss_dssp             CCSEEEEEECCC-C--CCHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHH--------
T ss_pred             CCCcEEEEEcch-hhcCCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHH--------
Confidence            257899999987 57777788899999999999999999999999999999999999999987542211110        


Q ss_pred             CHHHHHHHhh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          258 LPETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       258 ~pe~~a~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                        ......+. +++..|+|++..+.||+++  .+++|..+..||++.
T Consensus       211 --~~~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~~  253 (257)
T 3tl3_A          211 --SLGKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAIR  253 (257)
T ss_dssp             --HHHHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC-
T ss_pred             --HHHhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCcc
Confidence              11112233 5666777888888888865  567888888888763

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=2.3e-40  Score=303.72  Aligned_cols=236  Identities=23%  Similarity=0.343  Sum_probs=197.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.++++|++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~D~~   63 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------------------DAARYVHLDVT   63 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------------------GGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--------------------cCceEEEecCC
Confidence            5789999999999999999999999999999999999888776555442                    24778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.|+||++||.
T Consensus        64 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  141 (260)
T 1nff_A           64 QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI  141 (260)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEEeeh
Confidence            999999999999999999999999999876 5778889999999999999999999999999999876 47999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|.|++.. ...   ..+.           ..++++
T Consensus       142 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~---~~~~-----------~~~~~~  205 (260)
T 1nff_A          142 -EGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP---EDIF-----------QTALGR  205 (260)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC---TTCS-----------CCSSSS
T ss_pred             -hhcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch---hhHH-----------hCccCC
Confidence             566777888999999999999999999999999999999999999999853 110   0000           112334


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..++++++.+.|++++...+.++..+..+|++.
T Consensus       206 ~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG~~  239 (260)
T 1nff_A          206 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTV  239 (260)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCcCCEEEECCCee
Confidence            4556666666677777766566666777777653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2.5e-40  Score=305.84  Aligned_cols=241  Identities=21%  Similarity=0.232  Sum_probs=194.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.++++++.+++++.                .+.++.++.+|+
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   71 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA----------------RAGSAVLCKGDL   71 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCC
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh----------------cCCceEEEeccC
Confidence            467899999999999999999999999999999999 888888887777542                135688999999


Q ss_pred             CCH----HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCH-----------HHHHHHHHhhchHHHHHHHHHHHH
Q 017635          109 CEP----ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-----------EEIEQIVSTNLVGSILCTREAMRV  173 (368)
Q Consensus       109 ~~~----~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-----------~~~~~~~~vN~~g~~~l~~~~lp~  173 (368)
                      +|.    ++++++++++.+++|++|+||||||+.. ..++.+.+.           ++|++.+++|+.|+++++++++|+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  150 (276)
T 1mxh_A           72 SLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARR  150 (276)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred             CCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHH
Confidence            999    9999999999999999999999999876 567778888           999999999999999999999999


Q ss_pred             HHcCCCC------cEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc
Q 017635          174 MRDQPKG------GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ  247 (368)
Q Consensus       174 m~~~~~~------g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  247 (368)
                      |+ + +.      ++||++||. ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|+ . ...   
T Consensus       151 ~~-~-~~~~~~~~g~iv~isS~-~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~~~---  222 (276)
T 1mxh_A          151 QG-E-GGAWRSRNLSVVNLCDA-MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-AMP---  222 (276)
T ss_dssp             C---------CCCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-SSC---
T ss_pred             Hh-c-CCCCCCCCcEEEEECch-hhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-cCC---
Confidence            97 4 34      899999997 566778889999999999999999999999999999999999999999 2 111   


Q ss_pred             hhhhhhhhcCCHHHHHHHhhhh-hhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          248 NKQMFNIICELPETVARTLVPR-IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       248 ~~~~~~~~~~~pe~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                       ....      .......++.+ +..+++++..+.||+++...+++|..+..+|++
T Consensus       223 -~~~~------~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  271 (276)
T 1mxh_A          223 -QETQ------EEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  271 (276)
T ss_dssp             -HHHH------HHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             -HHHH------HHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence             0100      00011123445 667788888888888887767777777777765

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=2e-40  Score=302.82  Aligned_cols=243  Identities=16%  Similarity=0.215  Sum_probs=201.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++++|++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~   62 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--------------------GERSMFVRHDVS   62 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--------------------CTTEEEECCCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCceEEEEccCC
Confidence            568999999999999999999999999999999999988877665544                    135788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++.++|.|+++ + ++||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~-g~iv~isS~  139 (253)
T 1hxh_A           63 SEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-G-GSIINMASV  139 (253)
T ss_dssp             CHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-C-EEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHc-C-CEEEEEcch
Confidence            999999999999999999999999999876 5788899999999999999999999999999999876 3 999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCC--CeEEEEEecCcccCcccccCcc-cchhhhhhhhcCCHHHHHHHh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRS--KVGVHTASPGMVLTDLLLSGST-IQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~--gI~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~pe~~a~~~  266 (368)
                       ++..+.+....|++||+++++|+++++.|++++  ||+||+|+||+|.|++...... ......  ... .+   ...+
T Consensus       140 -~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~-~~---~~~p  212 (253)
T 1hxh_A          140 -SSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEM--VLH-DP---KLNR  212 (253)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHH--HBC-BT---TTBT
T ss_pred             -hhcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHH--Hhh-hh---ccCc
Confidence             567778889999999999999999999999988  9999999999999998643110 000000  000 00   0123


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..|++++..+.||+++...++++..+..+|++
T Consensus       213 ~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  248 (253)
T 1hxh_A          213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNSI  248 (253)
T ss_dssp             TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            455667788888888888887777778888777775

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.6e-40  Score=299.91  Aligned_cols=242  Identities=21%  Similarity=0.230  Sum_probs=188.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+.         +                 . ..+.++.+|+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~-----------------~-~~~~~~~~D~   55 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------E-----------------Q-YPFATEVMDV   55 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------S-----------------C-CSSEEEECCT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------h-----------------c-CCceEEEcCC
Confidence            56889999999999999999999999999999999998641         0                 0 1267889999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||
T Consensus        56 ~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS  133 (250)
T 2fwm_X           56 ADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQ-RGGAIVTVAS  133 (250)
T ss_dssp             TCHHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhc-CCCEEEEECc
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999876 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhh-hhcC-CHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN-IICE-LPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~-~pe~~a~~~  266 (368)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++.......  ..... .+.. ........+
T Consensus       134 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p  210 (250)
T 2fwm_X          134 D-AAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRGFGEQFKLGIP  210 (250)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------
T ss_pred             h-hhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC--hhHHHHHHhhhhhcccccCC
Confidence            7 56777888999999999999999999999999999999999999999986432100  00000 0000 000001345


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++++..|++++..+.||+++...+++|..+..+|++
T Consensus       211 ~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          211 LGKIARPQEIANTILFLASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             -----CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            567778899999999999988777888888777765

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2.7e-40  Score=312.59  Aligned_cols=242  Identities=21%  Similarity=0.247  Sum_probs=206.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC----------hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS----------SESVRMTVTELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+          .+++++..+++.+                 .+.
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~   86 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA-----------------AGG   86 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH-----------------TTC
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh-----------------cCC
Confidence            5789999999999999999999999999999999998          6777777777765                 346


Q ss_pred             eeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-
Q 017635          100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-  178 (368)
Q Consensus       100 ~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-  178 (368)
                      ++.++.+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|++++ 
T Consensus        87 ~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~  165 (322)
T 3qlj_A           87 EAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSK  165 (322)
T ss_dssp             EEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccc
Confidence            8899999999999999999999999999999999999987 57888999999999999999999999999999997531 


Q ss_pred             ----CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhh
Q 017635          179 ----KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI  254 (368)
Q Consensus       179 ----~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~  254 (368)
                          .+|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+|| +.|++..........     
T Consensus       166 ~~~~~~g~IV~isS~-~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-----  238 (322)
T 3qlj_A          166 AGKAVDGRIINTSSG-AGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-----  238 (322)
T ss_dssp             TTCCCCEEEEEECCH-HHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------
T ss_pred             cCCCCCcEEEEEcCH-HHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-----
Confidence                24899999987 5667778889999999999999999999999999999999999 999987543211100     


Q ss_pred             hcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          255 ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       255 ~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                         .+     ....+...|++++..+.||+++...+++|..+..||++..
T Consensus       239 ---~~-----~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          239 ---TQ-----DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             -------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             ---cc-----ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence               00     0011234788999999999999998999999999887743

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=6.5e-40  Score=303.91  Aligned_cols=246  Identities=13%  Similarity=0.120  Sum_probs=205.5

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++.+.                 ..++.++.|
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-----------------~~~~~~~~~   82 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-----------------FNPAAVLPC   82 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-----------------GCCSEEEEC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-----------------cCCceEEEe
Confidence            46789999999988  7899999999999999999999987  33444455432                 235788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      |++|.++++++++++.++++++|+||||||+...   ..++.+ .+.+++++.+++|+.++++++++++|.|+++  .|+
T Consensus        83 Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~  160 (280)
T 3nrc_A           83 DVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NAS  160 (280)
T ss_dssp             CTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCE
T ss_pred             ecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCe
Confidence            9999999999999999999999999999998652   134444 8999999999999999999999999999865  689


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      .....
T Consensus       161 iv~isS~-~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~------~~~~~  231 (280)
T 3nrc_A          161 MVALTYI-GAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF--KKM------LDYNA  231 (280)
T ss_dssp             EEEEECG-GGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH--HHH------HHHHH
T ss_pred             EEEEecc-ccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch--HHH------HHHHH
Confidence            9999997 67788899999999999999999999999999999999999999999986543211  111      11222


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ...++++...+++++..+.||+++...+++|..+..||++..
T Consensus       232 ~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~~  273 (280)
T 3nrc_A          232 MVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC  273 (280)
T ss_dssp             HHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTGGG
T ss_pred             hcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCccc
Confidence            344566777888999999999999888888988888888754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-40  Score=303.84  Aligned_cols=249  Identities=14%  Similarity=0.136  Sum_probs=201.7

Q ss_pred             ccccCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           26 EEHCKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      .+..++++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++.+.                 ..++.+
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~-----------------~~~~~~   68 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAE-----------------FGSELV   68 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHH-----------------TTCCCE
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHH-----------------cCCcEE
Confidence            45567899999999998  999999999999999999999999543 3344444432                 234788


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---CCCCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      ++||++|+++++++++++.+++|++|+||||||+....   .++.+ .+.+++++.+++|+.+++++++.++|+|++   
T Consensus        69 ~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---  145 (271)
T 3ek2_A           69 FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---  145 (271)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---
T ss_pred             EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---
Confidence            99999999999999999999999999999999987521   45555 899999999999999999999999999974   


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  259 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  259 (368)
                      .|+||++||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.......  ...      ..
T Consensus       146 ~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~------~~  216 (271)
T 3ek2_A          146 DASLLTLSYL-GAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSF--GKI------LD  216 (271)
T ss_dssp             EEEEEEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHH--HHH------HH
T ss_pred             CceEEEEecc-ccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccch--HHH------HH
Confidence            5899999987 57788889999999999999999999999999999999999999999986542210  011      11


Q ss_pred             HHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          260 ETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       260 e~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ......+++++..|++++..+.||+++...+++|..+..||++..
T Consensus       217 ~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~  261 (271)
T 3ek2_A          217 FVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA  261 (271)
T ss_dssp             HHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGG
T ss_pred             HHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeee
Confidence            223345567777888999999999999888888888888888743

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.5e-40  Score=301.97  Aligned_cols=243  Identities=22%  Similarity=0.253  Sum_probs=205.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||+++|++|+++|++|+++ .|+.+++++..+++.+                 .+.++.++.+|+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   66 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS-----------------NGGSAFSIGANL   66 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-----------------cCCceEEEecCc
Confidence            4689999999999999999999999999999885 7788888888887765                 356789999999


Q ss_pred             CCHHHHHHHHHHHHhHcC------CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          109 CEPADVQKLSNFAVNEFG------SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g------~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      +|.++++++++++.++++      ++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|+|+   +.++
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~  142 (255)
T 3icc_A           67 ESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSR  142 (255)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE---EEEE
T ss_pred             CCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC---CCCE
Confidence            999999999999888764      4999999999876 67888899999999999999999999999999994   3589


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||++||. ++..+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++........  ...      ....
T Consensus       143 iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~------~~~~  213 (255)
T 3icc_A          143 IINISSA-ATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDP--MMK------QYAT  213 (255)
T ss_dssp             EEEECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSH--HHH------HHHH
T ss_pred             EEEeCCh-hhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccH--HHH------Hhhh
Confidence            9999987 677888999999999999999999999999999999999999999999875432211  000      1111


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ...+++++..|+|+++.+.||+++...+++|..+..+|++
T Consensus       214 ~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (255)
T 3icc_A          214 TISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  253 (255)
T ss_dssp             HTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred             ccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence            2234566778888899999999998888888888877765

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.1e-40  Score=302.72  Aligned_cols=244  Identities=26%  Similarity=0.364  Sum_probs=191.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+.+++..+++.+                 .+.++.++.+|++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dl~   86 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE-----------------SGGEAVAIPGDVG   86 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCTT
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh-----------------cCCcEEEEEcCCC
Confidence            468999999999999999999999999999887 7888888877777755                 3468999999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC--CCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~~g~Iv~is  187 (368)
                      |.++++++++++.+++|++|+||||||+.....++.+.+.+++++.+++|+.|++++++.++|.|+++  ++.|+||++|
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is  166 (272)
T 4e3z_A           87 NAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVS  166 (272)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEc
Confidence            99999999999999999999999999987644778899999999999999999999999999999762  3478999999


Q ss_pred             CCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          188 GAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       188 S~~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      |.. +..+.+ ....|++||+|+++|+++++.|++++||+|++|+||+|+|++........  ..       .+.....+
T Consensus       167 S~~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~-------~~~~~~~~  236 (272)
T 4e3z_A          167 SMA-AILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPD--RA-------REMAPSVP  236 (272)
T ss_dssp             CTH-HHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------------CCT
T ss_pred             chH-hccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChH--HH-------HHHhhcCC
Confidence            873 434433 67889999999999999999999999999999999999999865421100  00       01111223


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +.+...++|+++.+.|++++...+++|..+..+|+
T Consensus       237 ~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          237 MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            44555567777777777777665555655555543

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-38  Score=298.85  Aligned_cols=229  Identities=23%  Similarity=0.287  Sum_probs=191.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++.                .+.++.++.+|+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~Dl   71 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS----------------NHENVVFHQLDV   71 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT----------------TCCSEEEEECCT
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc----------------CCCceEEEEccC
Confidence            4578999999999999999999999999999999999999999888888652                234789999999


Q ss_pred             CCH-HHHHHHHHHHHhHcCCCCEEEEccCCCCC-----------------------------CCCCCCCCHHHHHHHHHh
Q 017635          109 CEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKG-----------------------------FKPLLQFTNEEIEQIVST  158 (368)
Q Consensus       109 ~~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----------------------------~~~~~~~~~~~~~~~~~v  158 (368)
                      +|. ++++++++.+.+++|++|+||||||+...                             ..++.+.+.+++++.+++
T Consensus        72 ~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (311)
T 3o26_A           72 TDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKI  151 (311)
T ss_dssp             TSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheee
Confidence            998 99999999999999999999999998631                             124557789999999999


Q ss_pred             hchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCC------------------------------------------
Q 017635          159 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSST------------------------------------------  196 (368)
Q Consensus       159 N~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~------------------------------------------  196 (368)
                      |+.|++++++.++|+|+++ +.++||++||.. +..+.                                          
T Consensus       152 N~~g~~~l~~~~~~~l~~~-~~~~IV~isS~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (311)
T 3o26_A          152 NYNGVKSVTEVLIPLLQLS-DSPRIVNVSSST-GSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGW  229 (311)
T ss_dssp             HTHHHHHHHHHHHHHHTTS-SSCEEEEECCGG-GSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTC
T ss_pred             eeehHHHHHHHhhHhhccC-CCCeEEEEecCC-cccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccC
Confidence            9999999999999999877 578999999973 33221                                          


Q ss_pred             -CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhccc
Q 017635          197 -PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKG  275 (368)
Q Consensus       197 -~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~  275 (368)
                       +....|++||+|+++|+++|+.|+++  |+||+|+||+|+|+|.....           ..+|+++|+.++.....+++
T Consensus       230 ~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~-----------~~~~~~~a~~~~~~~~~~~~  296 (311)
T 3o26_A          230 PSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVKTEMNYGIG-----------NYTAEEGAEHVVRIALFPDD  296 (311)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBCSGGGTTCC-----------SBCHHHHHHHHHHHHTCCSS
T ss_pred             cccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCceecCCcCCCC-----------CCCHHHHHHHHHHHHhCCCC
Confidence             45678999999999999999999964  99999999999999865422           13799999999999888888


Q ss_pred             ccceeeeccCHHH
Q 017635          276 SGKAINYLTPPRI  288 (368)
Q Consensus       276 ~~~~~~~l~~~~~  288 (368)
                      ......|++++..
T Consensus       297 ~~~g~~~~~s~~a  309 (311)
T 3o26_A          297 GPSGFFYDCSELS  309 (311)
T ss_dssp             CCCSCEETC----
T ss_pred             CCCceEecccccc
Confidence            8888888887654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.9e-38  Score=298.25  Aligned_cols=228  Identities=22%  Similarity=0.369  Sum_probs=190.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+||||||++|||+++|++|+++|++|++++|+.++++++.+++....               .+.++.++.+|+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dl   68 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEG---------------SGPEVMGVQLDV   68 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT---------------CGGGEEEEECCT
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------CCCeEEEEECCC
Confidence            46789999999999999999999999999999999999999998888886531               123789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CCCcEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHI  183 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~~g~I  183 (368)
                      +|.++++++++.+.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|++++++.++|.|.++     .+.|+|
T Consensus        69 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  147 (319)
T 3ioy_A           69 ASREGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHV  147 (319)
T ss_dssp             TCHHHHHHHHHHHHHHTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEE
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEE
Confidence            9999999999999999999999999999976 6888999999999999999999999999999999763     247899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchh--------------
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK--------------  249 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~--------------  249 (368)
                      |++||. ++..+.++...|++||+|+++|+++++.|+.++||+|++|+||+|+|++..........              
T Consensus       148 V~isS~-a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (319)
T 3ioy_A          148 VNTASM-AAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVE  226 (319)
T ss_dssp             EEECCG-GGTCCCSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---------------------------
T ss_pred             EEeccc-ccccCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHH
Confidence            999998 67788889999999999999999999999999999999999999999987542211000              


Q ss_pred             hhhh--hhcCCHHHHHHHhhhhhhhc
Q 017635          250 QMFN--IICELPETVARTLVPRIRVV  273 (368)
Q Consensus       250 ~~~~--~~~~~pe~~a~~~~~~~~~~  273 (368)
                      .+..  ....+|+++|+.++..+..+
T Consensus       227 ~~~~~~~~~~~pe~vA~~~~~al~~~  252 (319)
T 3ioy_A          227 RLAGVHEFGMEPDVIGARVIEAMKAN  252 (319)
T ss_dssp             --CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred             HHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence            0000  01147999999998877654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=297.81  Aligned_cols=242  Identities=21%  Similarity=0.294  Sum_probs=189.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++++|++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~Dv~   64 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS-----------------LGGQCVPVVCDSS   64 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------HSSEEEEEECCTT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-----------------cCCceEEEECCCC
Confidence            46789999999999999999999999999999999999988888777755                 2357889999999


Q ss_pred             CHHHHHHHHHHHHhH-cCCCCEEEEccCC--C----CCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          110 EPADVQKLSNFAVNE-FGSIDIWINNAGT--N----KGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~-~g~iD~li~nAG~--~----~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      |+++++++++++.++ +|++|+||||||.  .    ....++.+.+.++|++.+++|+.+++++++.++|.|+++ +.|+
T Consensus        65 ~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~  143 (260)
T 2qq5_A           65 QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPA-GQGL  143 (260)
T ss_dssp             SHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGG-TCCE
T ss_pred             CHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhc-CCcE
Confidence            999999999999886 8999999999953  2    013567788899999999999999999999999999876 5799


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||++||.. +..+ +....|++||+++++|+++++.|++++||+||+|+||+|+|++...............     ...
T Consensus       144 iv~isS~~-~~~~-~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~-----~~~  216 (260)
T 2qq5_A          144 IVVISSPG-SLQY-MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPV-----LKQ  216 (260)
T ss_dssp             EEEECCGG-GTSC-CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------
T ss_pred             EEEEcChh-hcCC-CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhH-----HHH
Confidence            99999873 4333 3468999999999999999999999999999999999999998643211100000000     000


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHH-HHHHhhhh
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRI-LLALVTAW  296 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~  296 (368)
                      ...++++...|++++..+.||+++.. .+++|..+
T Consensus       217 ~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i  251 (260)
T 2qq5_A          217 FKSAFSSAETTELSGKCVVALATDPNILSLSGKVL  251 (260)
T ss_dssp             -----CHHHHHHHHHHHHHHHHTCTTGGGGTTCEE
T ss_pred             HHhhhccCCCHHHHHHHHHHHhcCcccccccceee
Confidence            12345566788889999999988764 24444443

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=9.6e-40  Score=299.69  Aligned_cols=244  Identities=17%  Similarity=0.171  Sum_probs=200.2

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++.+.                . ..+.++++
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~----------------~-~~~~~~~~   65 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA----------------L-GGALLFRA   65 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH----------------T-TCCEEEEC
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh----------------c-CCcEEEEC
Confidence            46789999999999  99999999999999999999999975 44445555442                1 23678999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      |++|+++++++++++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.|+++++++++|.|++   +|+|
T Consensus        66 D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~i  142 (261)
T 2wyu_A           66 DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGI  142 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEE
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEE
Confidence            9999999999999999999999999999998652   256778999999999999999999999999999963   4899


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      |++||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......  .....      .....
T Consensus       143 v~isS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~------~~~~~  213 (261)
T 2wyu_A          143 VTLTYY-ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG--FTKMY------DRVAQ  213 (261)
T ss_dssp             EEEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT--HHHHH------HHHHH
T ss_pred             EEEecc-cccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc--cHHHH------HHHHh
Confidence            999987 5667788889999999999999999999999999999999999999998543211  00000      11112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+++++..|++++..+.||+++...++++..+..+|++
T Consensus       214 ~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  252 (261)
T 2wyu_A          214 TAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGY  252 (261)
T ss_dssp             HSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCCc
Confidence            345566778888888888999887777777777777765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=3.4e-38  Score=292.27  Aligned_cols=245  Identities=20%  Similarity=0.288  Sum_probs=200.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++.+|+
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv   60 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY--------------------PDRAEAISLDV   60 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC--------------------TTTEEEEECCT
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------------------cCCceEEEeeC
Confidence            4567899999999999999999999999999999999998876654432                    34688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+++|++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||++||
T Consensus        61 ~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~~sS  138 (281)
T 3m1a_A           61 TDGERIDVVAADVLARYGRVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRER-GSGSVVNISS  138 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEcC
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999887 5799999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-------chhhh---hhh----
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-------QNKQM---FNI----  254 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-------~~~~~---~~~----  254 (368)
                      . ++..+.++...|++||+++++|+++++.|++++||+|++|+||+|+|++.......       .....   ...    
T Consensus       139 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (281)
T 3m1a_A          139 F-GGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGS  217 (281)
T ss_dssp             G-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-
T ss_pred             c-cccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhc
Confidence            7 57778889999999999999999999999999999999999999999986532211       00000   000    


Q ss_pred             ---hcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhc
Q 017635          255 ---ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLR  298 (368)
Q Consensus       255 ---~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  298 (368)
                         -..+|+++|+.++..+..+.  .....++.++...++++.....
T Consensus       218 ~~~~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~~~~~i~g~~~~i  262 (281)
T 3m1a_A          218 DGSQPGDPAKAAAAIRLALDTEK--TPLRLALGGDAVDFLTGHLDSV  262 (281)
T ss_dssp             ----CBCHHHHHHHHHHHHHSSS--CCSEEEESHHHHHHHHHHHHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHhCCC--CCeEEecCchHHHHHHHHHHHH
Confidence               12368888888877665432  3345677777776666555544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=9.4e-40  Score=297.37  Aligned_cols=240  Identities=20%  Similarity=0.319  Sum_probs=185.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+..++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++.++.
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~   66 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--------------------DNYTIEV   66 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------------------SSEEEEE
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--------------------cCccEEE
Confidence            45567899999999999999999999999999999999999988877666542                    3678899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.+++++++++    ++++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.|+||+
T Consensus        67 ~D~~~~~~~~~~~~~----~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~g~iv~  140 (249)
T 3f9i_A           67 CNLANKEECSNLISK----TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK-RYGRIIN  140 (249)
T ss_dssp             CCTTSHHHHHHHHHT----CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             cCCCCHHHHHHHHHh----cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE
Confidence            999999999887754    478999999999876 5677788999999999999999999999999999876 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++.........          .......
T Consensus       141 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----------~~~~~~~  209 (249)
T 3f9i_A          141 ISSI-VGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQR----------EAIVQKI  209 (249)
T ss_dssp             ECCC-CC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHH----------HHHHHHC
T ss_pred             EccH-HhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHH----------HHHHhcC
Confidence            9987 5777888999999999999999999999999999999999999999998754321110          1122334


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++.++..+++++..+.||+++...+++|..+..+|++
T Consensus       210 ~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          210 PLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence            5566677888888888888888777777777777765

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-39  Score=296.03  Aligned_cols=252  Identities=20%  Similarity=0.243  Sum_probs=203.6

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +...+.+++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.+.                .+.++.
T Consensus         4 ~~~~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~   67 (265)
T 1h5q_A            4 MAPGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE----------------FGVKTK   67 (265)
T ss_dssp             --CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH----------------HTCCEE
T ss_pred             CCCCCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh----------------cCCeeE
Confidence            3344556789999999999999999999999999999999999877766666666543                235688


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      ++.+|++|.++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|.+++..++
T Consensus        68 ~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~  146 (265)
T 1h5q_A           68 AYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGS  146 (265)
T ss_dssp             EEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             EEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCce
Confidence            9999999999999999999999999999999999876 577888999999999999999999999999999987644689


Q ss_pred             EEEEcCCCCCCCCCC-------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          183 IFNMDGAGSGGSSTP-------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       183 Iv~isS~~~~~~~~~-------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                      ||++||. ++..+.+       ....|++||++++.|+++++.|++++||+|++|+||+|.|++......    ...   
T Consensus       147 iv~~sS~-~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~---  218 (265)
T 1h5q_A          147 IVVTSSM-SSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK----KIR---  218 (265)
T ss_dssp             EEEECCG-GGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH----HHH---
T ss_pred             EEEeCCc-hhhccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccch----hHH---
Confidence            9999987 3433332       267999999999999999999999999999999999999998643211    000   


Q ss_pred             cCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          256 CELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                         .......+++++..+++++..+.|++++...+.++..+..+|++
T Consensus       219 ---~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          219 ---DHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             ---HHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             ---HHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCE
Confidence               01111234456678889999999998877666666666666654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=3.9e-40  Score=301.09  Aligned_cols=234  Identities=24%  Similarity=0.364  Sum_probs=186.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.+++                            ..+.++++|
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~----------------------------~~~~~~~~D   67 (253)
T 2nm0_A           16 PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP----------------------------EGFLAVKCD   67 (253)
T ss_dssp             ----CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh----------------------------ccceEEEec
Confidence            4567899999999999999999999999999999999986532                            126678999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++|
T Consensus        68 l~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~is  145 (253)
T 2nm0_A           68 ITDTEQVEQAYKEIEETHGPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLIS  145 (253)
T ss_dssp             TTSHHHHHHHHHHHHHHTCSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEEC
Confidence            99999999999999999999999999999876 5778888999999999999999999999999999876 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++..........          ......++
T Consensus       146 S~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~----------~~~~~~p~  214 (253)
T 2nm0_A          146 SV-VGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRA----------NIVSQVPL  214 (253)
T ss_dssp             CC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHH----------HHHTTCTT
T ss_pred             ch-hhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHH----------HHHhcCCC
Confidence            87 56666677889999999999999999999999999999999999999986431110000          01111234


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.||+++...+++|..+..+|++
T Consensus       215 ~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          215 GRYARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence            45667777777888888877767777777777764

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.4e-38  Score=288.28  Aligned_cols=186  Identities=29%  Similarity=0.434  Sum_probs=165.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||+++|++|+++|++|++++|+.++++++.+++.                    .++.++.+|++|+++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~Dv~~~~~   60 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--------------------DNLYIAQLDVRNRAA   60 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--------------------TTEEEEECCTTCHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------CceEEEEcCCCCHHH
Confidence            689999999999999999999999999999999988776655541                    357889999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||. ++.
T Consensus        61 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~-~~~  138 (248)
T 3asu_A           61 IEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGST-AGS  138 (248)
T ss_dssp             HHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG-GGT
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccc-hhc
Confidence            9999999999999999999999986324678889999999999999999999999999999876 57999999997 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc-Ccccc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL-TDLLL  241 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~-T~~~~  241 (368)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||+|+ |++..
T Consensus       139 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~  187 (248)
T 3asu_A          139 WPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN  187 (248)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchh
Confidence            7788899999999999999999999999999999999999999 99854

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=1.1e-37  Score=281.19  Aligned_cols=215  Identities=24%  Similarity=0.331  Sum_probs=182.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.++++|++|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~   64 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE----------------QGVEVFYHHLDVSKA   64 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCTTCH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh----------------cCCeEEEEEeccCCH
Confidence            4699999999999999999999999999999999999999888888643                346789999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.+++|++|+||||||+.. ..++.+.+.+++++.+++|+.|+++++++++|+|+++  ++++|+++|. .
T Consensus        65 ~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~-~  140 (235)
T 3l77_A           65 ESVEEFSKKVLERFGDVDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSD-V  140 (235)
T ss_dssp             HHHHHHCC-HHHHHSSCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCG-G
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecc-h
Confidence            9999999999999999999999999977 6888999999999999999999999999999999543  6788888877 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      +..+.+....|++||+++++|+++++  +...||+||+|+||+|+|++..........  .  ...+||++|+.++..+.
T Consensus       141 ~~~~~~~~~~Y~~sKaa~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~--~--~~~~p~dva~~v~~l~~  214 (235)
T 3l77_A          141 SARLIPYGGGYVSTKWAARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGKPKE--K--GYLKPDEIAEAVRCLLK  214 (235)
T ss_dssp             GSSCCTTCHHHHHHHHHHHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCCCGG--G--TCBCHHHHHHHHHHHHT
T ss_pred             hcccCCCcchHHHHHHHHHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCcccc--c--CCCCHHHHHHHHHHHHc
Confidence            66778888999999999999999994  446799999999999999987653321111  1  12367777777665554


Q ss_pred             h
Q 017635          272 V  272 (368)
Q Consensus       272 ~  272 (368)
                      .
T Consensus       215 ~  215 (235)
T 3l77_A          215 L  215 (235)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=7.8e-39  Score=294.00  Aligned_cols=248  Identities=23%  Similarity=0.326  Sum_probs=189.4

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..|++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++++                 .+.++.++.+
T Consensus         8 ~~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   70 (266)
T 1xq1_A            8 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-----------------KGFQVTGSVC   70 (266)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCeeEEEEC
Confidence            45678999999999999999999999999999999999999888887777754                 2356888999


Q ss_pred             cCCCHHHHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      |++|.++++++++++.+.+ +++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|+++ +.++||+
T Consensus        71 D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~  148 (266)
T 1xq1_A           71 DASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIF  148 (266)
T ss_dssp             CTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEE
Confidence            9999999999999999999 89999999999876 5778889999999999999999999999999999876 5789999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.+....|++||++++.|+++++.|++++||+|++|+||++.|++......   ....      .......
T Consensus       149 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~------~~~~~~~  218 (266)
T 1xq1_A          149 MSSI-AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFK------KVVISRK  218 (266)
T ss_dssp             EC-----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------
T ss_pred             Eccc-hhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHH------HHHHhcC
Confidence            9987 4666777888999999999999999999999999999999999999998643210   0100      0111223


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++.+...++++++.+.||+++...+.++..+..+|++.
T Consensus       219 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~~  256 (266)
T 1xq1_A          219 PLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLT  256 (266)
T ss_dssp             -----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCCcc
Confidence            45567788999999999999877777777777777764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.4e-39  Score=296.34  Aligned_cols=234  Identities=21%  Similarity=0.329  Sum_probs=186.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|++|||||++|||+++|++|+++|++|++++|+.++++                            .+..+++|
T Consensus        10 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------------------------~~~~~~~D   61 (247)
T 1uzm_A           10 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------------------------GLFGVEVD   61 (247)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------------------------TSEEEECC
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------------------------HhcCeecc
Confidence            34678999999999999999999999999999999999865421                            11238899


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.++||++|
T Consensus        62 ~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  139 (247)
T 1uzm_A           62 VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIG  139 (247)
T ss_dssp             TTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEC
Confidence            99999999999999999999999999999876 5778899999999999999999999999999999887 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++......    ....      ......++
T Consensus       140 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~------~~~~~~p~  208 (247)
T 1uzm_A          140 SV-SGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE----RIQQ------GALQFIPA  208 (247)
T ss_dssp             CC-CC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH----HHHH------HHGGGCTT
T ss_pred             CH-hhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH----HHHH------HHHhcCCC
Confidence            87 5667778889999999999999999999999999999999999999998643111    0000      00011233


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.||+++...++++..+..+|++
T Consensus       209 ~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          209 KRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence            45567777888888888877767777777777764

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.4e-38  Score=295.95  Aligned_cols=193  Identities=23%  Similarity=0.352  Sum_probs=164.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-----hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+     .++++++.+.+..                 .+.++.+
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~-----------------~~~~~~~   63 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARD-----------------NDVDLRT   63 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHH-----------------HTCCEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHh-----------------cCCcEEE
Confidence            45678999999999999999999999999999998876     4445554444433                 3457899


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +++|++|+++++++++++.+++|++|+||||||+.. ..++.+.+.+++++++++|+.|+++++++++|+|+++ +.|+|
T Consensus        64 ~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~i  141 (324)
T 3u9l_A           64 LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLL  141 (324)
T ss_dssp             EECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             EEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEE
Confidence            999999999999999999999999999999999876 6888999999999999999999999999999999987 57999


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      |++||..+...+.+....|++||+|+++|+++++.|++++||+|++|+||+|.|++.
T Consensus       142 V~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~  198 (324)
T 3u9l_A          142 IWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN  198 (324)
T ss_dssp             EEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred             EEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence            999998443355677889999999999999999999999999999999999998764

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=4.1e-39  Score=296.06  Aligned_cols=241  Identities=21%  Similarity=0.314  Sum_probs=199.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++                            +.++.++++|+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------------------------~~~~~~~~~Dl   55 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------------------------EAKYDHIECDV   55 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------------------------SCSSEEEECCT
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------------------------CCceEEEEecC
Confidence            35689999999999999999999999999999999998653                            13577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|.|+++ +.|+||++||
T Consensus        56 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS  133 (264)
T 2dtx_A           56 TNPDQVKASIDHIFKEYGSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRS-RDPSIVNISS  133 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS-SSCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEECC
Confidence            9999999999999999999999999999876 5788899999999999999999999999999999876 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc---hhh-hhhhhcCCHHHHHH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ---NKQ-MFNIICELPETVAR  264 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~---~~~-~~~~~~~~pe~~a~  264 (368)
                      . ++..+.+....|++||+++++|+++++.|+++. |+||+|+||+++|++........   ... ....   .......
T Consensus       134 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  208 (264)
T 2dtx_A          134 V-QASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKK---ISEWGHE  208 (264)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHH---HHHHHHH
T ss_pred             c-hhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHH---HHHHHhc
Confidence            7 567778889999999999999999999999998 99999999999999854210000   000 0000   0011122


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      .++.++..+++++..+.||+++...+++|..+..+|++..
T Consensus       209 ~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~  248 (264)
T 2dtx_A          209 HPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSI  248 (264)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCccc
Confidence            3455677888999999999998877788888888887643

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=9.9e-40  Score=300.90  Aligned_cols=249  Identities=13%  Similarity=0.118  Sum_probs=200.8

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           30 KAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        30 ~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|+.++. +++.++                    .+.++.++++
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~~   63 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--------------------LPAKAPLLEL   63 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--------------------SSSCCCEEEC
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh--------------------cCCCceEEEc
Confidence            478999999999  99999999999999999999999987653 322221                    1246778999


Q ss_pred             cCCCHHHHHHHHHHHHhHcC---CCCEEEEccCCCCC----CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          107 DVCEPADVQKLSNFAVNEFG---SIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g---~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      |++|+++++++++++.+++|   ++|+||||||+..+    ..++.+.+.++|++.+++|+.|+++++++++|+|++   
T Consensus        64 Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---  140 (269)
T 2h7i_A           64 DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---  140 (269)
T ss_dssp             CTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---
T ss_pred             cCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---
Confidence            99999999999999999999   99999999998642    357788999999999999999999999999999964   


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-chhhhhhhhcC-
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICE-  257 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~-  257 (368)
                      +|+||++||.. . .+.+.+..|++||+++++|+++++.|++++||+||+|+||+|+|++....... ........... 
T Consensus       141 ~g~iv~iss~~-~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  218 (269)
T 2h7i_A          141 GGSIVGMDFDP-S-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLL  218 (269)
T ss_dssp             EEEEEEEECCC-S-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHH
T ss_pred             CCeEEEEcCcc-c-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHH
Confidence            37999999873 3 56778899999999999999999999999999999999999999985421000 00000000000 


Q ss_pred             CHHHHHHHhhh-hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          258 LPETVARTLVP-RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       258 ~pe~~a~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ........+++ ++..|+|++..+.||+++...+++|..+..||++.
T Consensus       219 ~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          219 EEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             HHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence            01112334566 58899999999999999988889999999988864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.6e-39  Score=295.38  Aligned_cols=233  Identities=21%  Similarity=0.211  Sum_probs=187.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~---~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ++++|++|||||++|||+++|++|++   +|++|++++|+.++++++.+++.+..               .+.++.++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~   67 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ---------------PDLKVVLAAA   67 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTSEEEEEEC
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhC---------------CCCeEEEEec
Confidence            56889999999999999999999999   89999999999999888888876531               1357889999


Q ss_pred             cCCCHHHHHHHHHHHHh--HcCCCC--EEEEccCCCCCC-CCCCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CC
Q 017635          107 DVCEPADVQKLSNFAVN--EFGSID--IWINNAGTNKGF-KPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PK  179 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~--~~g~iD--~li~nAG~~~~~-~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~  179 (368)
                      |++|+++++++++++.+  .+|++|  +||||||+..+. .++.+ .+.++|++.+++|+.|+++++++++|.|+++ ++
T Consensus        68 Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  147 (259)
T 1oaa_A           68 DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL  147 (259)
T ss_dssp             CTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC
T ss_pred             CCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            99999999999999988  778999  999999986422 45667 7899999999999999999999999999865 23


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-chhhhhhhhcCC
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFNIICEL  258 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~  258 (368)
                      .|+||++||. ++..+.++...|++||+|+++|+++++.|+++  |+||+|+||+|+|++....... ......      
T Consensus       148 ~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~------  218 (259)
T 1oaa_A          148 SKTVVNISSL-CALQPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELR------  218 (259)
T ss_dssp             EEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHH------
T ss_pred             CceEEEEcCc-hhcCCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHH------
Confidence            6899999997 57778888999999999999999999999974  9999999999999986431100 000000      


Q ss_pred             HHHHHHHhhhhhhhcccccceeeeccCH
Q 017635          259 PETVARTLVPRIRVVKGSGKAINYLTPP  286 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~~~~l~~~  286 (368)
                      .......+.+++..|++++..+.|++++
T Consensus       219 ~~~~~~~p~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          219 SKLQKLKSDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhcCCcCCHHHHHHHHHHHHhh
Confidence            0111223455566677777777776653

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.9e-39  Score=298.30  Aligned_cols=243  Identities=14%  Similarity=0.170  Sum_probs=198.7

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|++|||||+  +|||+++|++|+++|++|++++|+. +.++..+++.+..                 ....++++|+
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~-----------------~~~~~~~~D~   68 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL-----------------GSDIVLQCDV   68 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT-----------------TCCCEEECCT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc-----------------CCcEEEEccC
Confidence            789999999999  9999999999999999999999987 4555555554421                 1236789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCC-CCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQ-FTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~-~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +|+++++++++++.+++|++|+||||||+..+   ..++.+ .+.++|++.+++|+.|+++++++++|+|++   +|+||
T Consensus        69 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv  145 (265)
T 1qsg_A           69 AEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALL  145 (265)
T ss_dssp             TCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEE
Confidence            99999999999999999999999999998652   145667 899999999999999999999999999963   48999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++......  .....      ......
T Consensus       146 ~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~------~~~~~~  216 (265)
T 1qsg_A          146 TLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKML------AHCEAV  216 (265)
T ss_dssp             EEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT--HHHHH------HHHHHH
T ss_pred             EEcch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc--cHHHH------HHHHhc
Confidence            99987 5667788889999999999999999999999999999999999999998643211  00000      011122


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|++++..+.|++++...++++..+..+|++.
T Consensus       217 ~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          217 TPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             STTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCCcC
Confidence            355667788888888899998877777777777777653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=5.8e-40  Score=305.85  Aligned_cols=259  Identities=19%  Similarity=0.198  Sum_probs=194.8

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      ..+.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++
T Consensus         8 ~~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~   67 (291)
T 3rd5_A            8 AADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM--------------------AGQVEVR   67 (291)
T ss_dssp             GGGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS--------------------SSEEEEE
T ss_pred             hhhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------cCCeeEE
Confidence            34556889999999999999999999999999999999999998876654432                    3578999


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      ++|++|.++++++++++    +++|+||||||+..   +..+.+.+++++++++|+.|+++++++++|.|.+     +||
T Consensus        68 ~~Dl~d~~~v~~~~~~~----~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv  135 (291)
T 3rd5_A           68 ELDLQDLSSVRRFADGV----SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVV  135 (291)
T ss_dssp             ECCTTCHHHHHHHHHTC----CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEE
T ss_pred             EcCCCCHHHHHHHHHhc----CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hee
Confidence            99999999999988765    78999999999864   3356788899999999999999999999999863     799


Q ss_pred             EEcCCCCCCCC-------------CCCchhhHHHHHHHHHHHHHHHHHhCCCC--eEEEEEecCcccCcccccCcccchh
Q 017635          185 NMDGAGSGGSS-------------TPLTAVYGSTKCGLRQLQASLFKESKRSK--VGVHTASPGMVLTDLLLSGSTIQNK  249 (368)
Q Consensus       185 ~isS~~~~~~~-------------~~~~~~Y~aSKaal~~l~~~la~e~~~~g--I~v~~v~PG~v~T~~~~~~~~~~~~  249 (368)
                      ++||.. +..+             .++...|++||+|+++|+++++.|++++|  |+||+|+||+|+|++......... 
T Consensus       136 ~isS~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~-  213 (291)
T 3rd5_A          136 TVSSMA-HWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG-  213 (291)
T ss_dssp             EECCGG-GTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------
T ss_pred             Eeechh-hccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH-
Confidence            999873 3322             35567899999999999999999999877  999999999999999764321111 


Q ss_pred             hhhhhhcCCHHHHHHHhhhhhhh-cccccceeeeccCHHHHHHHhhhhhcCCceecC------CCccccchhhhhhhhhh
Q 017635          250 QMFNIICELPETVARTLVPRIRV-VKGSGKAINYLTPPRILLALVTAWLRRGRWFDD------QGRALYAAEADRIRNWA  322 (368)
Q Consensus       250 ~~~~~~~~~pe~~a~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~~~l~~w~  322 (368)
                                +...+.+.+++.. +++++..+.|++++.  +.+|..+..+|++...      .......+.++++|+|.
T Consensus       214 ----------~~~~~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~  281 (291)
T 3rd5_A          214 ----------DALMSAATRVVATDADFGARQTLYAASQD--LPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALS  281 (291)
T ss_dssp             ---------------------CHHHHHHHHHHHHHHHSC--CCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHH
Confidence                      1111222233322 556666666666653  5677788888876543      22344556678999998


Q ss_pred             ccccCcc
Q 017635          323 ENRARFS  329 (368)
Q Consensus       323 ~~~~~~~  329 (368)
                      ++.....
T Consensus       282 ~~~~~~~  288 (291)
T 3rd5_A          282 EQLTKTE  288 (291)
T ss_dssp             HHHHTCC
T ss_pred             HHHHccc
Confidence            8765443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.2e-38  Score=290.58  Aligned_cols=191  Identities=27%  Similarity=0.392  Sum_probs=167.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++ |++|||||++|||+++|++|+++|++|++++|+.++++++.+++..                 . .++.++++|++
T Consensus        19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~-~~~~~~~~Dv~   79 (272)
T 2nwq_A           19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-----------------K-TRVLPLTLDVR   79 (272)
T ss_dssp             --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-----------------T-SCEEEEECCTT
T ss_pred             CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-----------------C-CcEEEEEcCCC
Confidence            345 9999999999999999999999999999999999888777666532                 1 46888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc-EEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG-HIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g-~Iv~isS  188 (368)
                      |+++++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|++++++.++|.|+++ +.| +||++||
T Consensus        80 d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~~IV~isS  158 (272)
T 2nwq_A           80 DRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAH-GAGASIVNLGS  158 (272)
T ss_dssp             CHHHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CTTCEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCC
Confidence            99999999999999999999999999986523678889999999999999999999999999999876 457 9999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      . ++..+.++...|++||+++++|+++++.|++++||+||+|+||+|+|++..
T Consensus       159 ~-~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~  210 (272)
T 2nwq_A          159 V-AGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSL  210 (272)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC-----
T ss_pred             c-hhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchh
Confidence            7 566778888999999999999999999999999999999999999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-39  Score=295.12  Aligned_cols=238  Identities=18%  Similarity=0.252  Sum_probs=193.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++.. ++                     .++.++++|++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~---------------------~~~~~~~~D~~   60 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY---------------------PGIQTRVLDVT   60 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS---------------------TTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc---------------------cCceEEEeeCC
Confidence            468999999999999999999999999999999999987654322 11                     15778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++    ++.++++++|+||||||... ..++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        61 ~~~~~~----~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  134 (246)
T 2ag5_A           61 KKKQID----QFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV  134 (246)
T ss_dssp             CHHHHH----HHHHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS
T ss_pred             CHHHHH----HHHHHhCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            999988    44556789999999999876 5778889999999999999999999999999999876 57899999987


Q ss_pred             CCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc--chhhhhhhhcCCHHHHHHHh
Q 017635          190 GSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI--QNKQMFNIICELPETVARTL  266 (368)
Q Consensus       190 ~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~pe~~a~~~  266 (368)
                       ++..+.+ +...|++||+++++|+++++.|++++||+||+|+||+|.|++.......  ......      .......+
T Consensus       135 -~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~  207 (246)
T 2ag5_A          135 -ASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEAR------NDFLKRQK  207 (246)
T ss_dssp             -BTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHH------HHHHHTCT
T ss_pred             -HhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHH------HHHHhcCC
Confidence             4555666 8899999999999999999999999999999999999999985321100  000000      01111234


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++..|++++..+.||+++...+++|..+..+|++
T Consensus       208 ~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  243 (246)
T 2ag5_A          208 TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGW  243 (246)
T ss_dssp             TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            556778889999999999988878888888887775

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.6e-38  Score=290.76  Aligned_cols=248  Identities=21%  Similarity=0.247  Sum_probs=197.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++++
T Consensus         7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   69 (260)
T 3awd_A            7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM-----------------EGHDVSSVVM   69 (260)
T ss_dssp             GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCceEEEEe
Confidence            34678999999999999999999999999999999999999888877777754                 2357889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.++++++|+||||||...+..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++
T Consensus        70 D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~  148 (260)
T 3awd_A           70 DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ-KQGVIVAI  148 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEE
Confidence            99999999999999999999999999999986534677889999999999999999999999999999876 47899999


Q ss_pred             cCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          187 DGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       187 sS~~~~~~~~~~~--~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ||. .+..+.+..  ..|++||++++.|+++++.|++++||+|++|+||++.|++......  .....      ......
T Consensus       149 sS~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~------~~~~~~  219 (260)
T 3awd_A          149 GSM-SGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME--KPELY------DAWIAG  219 (260)
T ss_dssp             CCG-GGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT--CHHHH------HHHHHT
T ss_pred             ecc-hhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC--ChHHH------HHHHhc
Confidence            987 455555666  8999999999999999999999999999999999999998641100  00000      000111


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      .++.++..++++++.+.+++++...+.++..+..+|+
T Consensus       220 ~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          220 TPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            2334455666666666677665544444444444444

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4.8e-39  Score=291.15  Aligned_cols=233  Identities=23%  Similarity=0.315  Sum_probs=193.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||+++|++|+++|++|++++|+.++.   .+++                      .+.++++|++| +
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~----------------------~~~~~~~D~~~-~   55 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL----------------------GAVPLPTDLEK-D   55 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH----------------------TCEEEECCTTT-S
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh----------------------CcEEEecCCch-H
Confidence            68999999999999999999999999999999998652   1221                      15678999999 9


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.++++++|+||||||... ..++.+.+.++|++.+++|+.+++++++.++|.|+++ +.++||++||. ++
T Consensus        56 ~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~-~~  132 (239)
T 2ekp_A           56 DPKGLVKRALEALGGLHVLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEA-GWGRVLFIGSV-TT  132 (239)
T ss_dssp             CHHHHHHHHHHHHTSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-GG
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECch-hh
Confidence            999999999999999999999999876 5788899999999999999999999999999999876 57999999987 45


Q ss_pred             CCCC--CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          193 GSST--PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       193 ~~~~--~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      ..+.  +....|++||+++++|+++++.|++++||+||+|+||+++|++......  .+...      .......+++++
T Consensus       133 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~------~~~~~~~p~~~~  204 (239)
T 2ekp_A          133 FTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ--NPELY------EPITARIPMGRW  204 (239)
T ss_dssp             TSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--CHHHH------HHHHTTCTTSSC
T ss_pred             ccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc--CHHHH------HHHHhcCCCCCC
Confidence            5555  7889999999999999999999999999999999999999998542110  00000      001112344566


Q ss_pred             hhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          271 RVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..|+++++.+.||+++...++++..+..+|++
T Consensus       205 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  236 (239)
T 2ekp_A          205 ARPEEIARVAAVLCGDEAEYLTGQAVAVDGGF  236 (239)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             cCHHHHHHHHHHHcCchhcCCCCCEEEECCCc
Confidence            77888888888999887777778777777765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=5.2e-39  Score=297.83  Aligned_cols=241  Identities=16%  Similarity=0.169  Sum_probs=192.4

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.++++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--------------------~~~~~~~~~   83 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--------------------GNRAEFVST   83 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------CTTEEEEEC
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--------------------CCceEEEEc
Confidence            346789999999999999999999999999999999999999887776665                    246889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEc-cCCCCCCCCC-----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC---
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINN-AGTNKGFKPL-----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ---  177 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~n-AG~~~~~~~~-----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---  177 (368)
                      |++|.++++++++++ ++++++|++||| ||... ...+     .+.+.++|++.+++|+.+++++++.++|.|.+.   
T Consensus        84 Dl~~~~~v~~~~~~~-~~~~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~  161 (281)
T 3ppi_A           84 NVTSEDSVLAAIEAA-NQLGRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPR  161 (281)
T ss_dssp             CTTCHHHHHHHHHHH-TTSSEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCC
T ss_pred             CCCCHHHHHHHHHHH-HHhCCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhccc
Confidence            999999999999999 889999999999 55543 3333     368899999999999999999999999999862   


Q ss_pred             --CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh
Q 017635          178 --PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII  255 (368)
Q Consensus       178 --~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  255 (368)
                        ++.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++...........+    
T Consensus       162 ~~~~~g~iv~isS~-~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~----  236 (281)
T 3ppi_A          162 ENGERGALVLTASI-AGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKF----  236 (281)
T ss_dssp             TTSCCEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHH----
T ss_pred             ccCCCeEEEEEecc-cccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHH----
Confidence              257899999998 6778888999999999999999999999999999999999999999998754322111111    


Q ss_pred             cCCHHHHHHHhh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          256 CELPETVARTLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       256 ~~~pe~~a~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                            ....+. +++..++++++.+.||+++  .+++|..+..+|++
T Consensus       237 ------~~~~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG~  276 (281)
T 3ppi_A          237 ------AANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDGAQ  276 (281)
T ss_dssp             ------HHTCCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTC
T ss_pred             ------HhcCCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCCc
Confidence                  111112 3344555555555565543  24556666666654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.3e-38  Score=291.59  Aligned_cols=246  Identities=24%  Similarity=0.342  Sum_probs=200.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||++++++|+++|++|++++| +.+++++..+++.+                 .+.++.++.+|+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~~D~   66 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-----------------VGGEAIAVKGDV   66 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-----------------cCCceEEEECCC
Confidence            467899999999999999999999999999999999 87777777777654                 345788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++|.|++++..++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS  145 (261)
T 1gee_A           67 TVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS  145 (261)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCC
Confidence            9999999999999999999999999999876 567788999999999999999999999999999988733789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.+....|++||++++.++++++.|++++||+|++|+||+|.|++......  ......      +.....++.
T Consensus       146 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~------~~~~~~~~~  216 (261)
T 1gee_A          146 V-HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRA------DVESMIPMG  216 (261)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHH------HHHTTCTTS
T ss_pred             H-HhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc--ChhHHH------HHHhcCCCC
Confidence            7 5667788899999999999999999999999999999999999999998642110  000000      000012234


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +...+++++..+.|++++...+.++..+..+|++
T Consensus       217 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  250 (261)
T 1gee_A          217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCcCHHHHHHHHHHHhCccccCCCCcEEEEcCCc
Confidence            4556777777777777766555556666666654

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.8e-38  Score=289.31  Aligned_cols=246  Identities=22%  Similarity=0.305  Sum_probs=196.0

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee-EE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV-AG  103 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v-~~  103 (368)
                      +...|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .++ .+
T Consensus         3 ~~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~   62 (254)
T 2wsb_A            3 YRTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG--------------------AAVAAR   62 (254)
T ss_dssp             TTTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGEEEE
T ss_pred             cccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--------------------ccceeE
Confidence            344567899999999999999999999999999999999999888776655541                    245 78


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +.+|++|.++++++++++.+ ++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++|
T Consensus        63 ~~~D~~~~~~~~~~~~~~~~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~i  139 (254)
T 2wsb_A           63 IVADVTDAEAMTAAAAEAEA-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVAR-GAGAI  139 (254)
T ss_dssp             EECCTTCHHHHHHHHHHHHH-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEE
T ss_pred             EEEecCCHHHHHHHHHHHHh-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEE
Confidence            99999999999999999988 899999999999876 5778889999999999999999999999999999877 57999


Q ss_pred             EEEcCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          184 FNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       184 v~isS~~~~~~~~~~~--~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      |++||. ++..+.+..  ..|++||++++.++++++.|++++||+|++|+||++.|++.......  ....      ...
T Consensus       140 v~isS~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~------~~~  210 (254)
T 2wsb_A          140 VNLGSM-SGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER--PELF------ETW  210 (254)
T ss_dssp             EEECCG-GGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTC--HHHH------HHH
T ss_pred             EEEecc-hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccC--hHHH------HHH
Confidence            999987 455556666  89999999999999999999999999999999999999986421100  0000      000


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ....+..+...++++++.+.|++++...+.+|..+..+|++
T Consensus       211 ~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          211 LDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             HHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence            11122344556677777777777765555555555555553

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.4e-39  Score=295.71  Aligned_cols=232  Identities=16%  Similarity=0.159  Sum_probs=192.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-e--CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVA-S--RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~-~--R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|++|||||++|||+++|++|+++|++|+++ +  |+.+++++..+++ .                  +       +|+.
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~------------------~-------~~~~   54 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P------------------G-------TIAL   54 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T------------------T-------EEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C------------------C-------Cccc
Confidence            5899999999999999999999999999999 6  9988776655443 1                  1       1233


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |.++++++++++.+++|++|+||||||+.. .   .++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++
T Consensus        55 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~i  132 (244)
T 1zmo_A           55 AEQKPERLVDATLQHGEAIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFI  132 (244)
T ss_dssp             CCCCGGGHHHHHGGGSSCEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEE
Confidence            777888999999999999999999999876 5   788899999999999999999999999999999887 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc---ccCcccchhhhhhhhcCCHHHHH
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL---LSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~---~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      ||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++.   .....   ...      ..+...
T Consensus       133 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~------~~~~~~  202 (244)
T 1zmo_A          133 TSS-VGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN---NPE------LRERVD  202 (244)
T ss_dssp             CCG-GGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH---CHH------HHHHHH
T ss_pred             CCh-hhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc---hHH------HHHHHh
Confidence            987 56777888999999999999999999999999999999999999999986   32100   000      011112


Q ss_pred             -HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 -RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                       ..+++++..|++++..+.||+++...+++|..+..||++
T Consensus       203 ~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG~  242 (244)
T 1zmo_A          203 RDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGGY  242 (244)
T ss_dssp             HHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred             cCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCCC
Confidence             345567778889999999999988888888888888875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=8.4e-40  Score=297.06  Aligned_cols=235  Identities=17%  Similarity=0.163  Sum_probs=194.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~-~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .++|++|||||++|||+++|++|++ .|++|++++|+.+.                           ....+.++++|++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~---------------------------~~~~~~~~~~Dv~   54 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF---------------------------SAENLKFIKADLT   54 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC---------------------------CCTTEEEEECCTT
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc---------------------------ccccceEEecCcC
Confidence            4679999999999999999999999 78999999987641                           1235688999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++.+ + ++++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++   |+||++||.
T Consensus        55 ~~~~v~~~~~~~-~-~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~---g~iv~~sS~  128 (244)
T 4e4y_A           55 KQQDITNVLDII-K-NVSFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG---ASIVFNGSD  128 (244)
T ss_dssp             CHHHHHHHHHHT-T-TCCEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE---EEEEEECCG
T ss_pred             CHHHHHHHHHHH-H-hCCCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC---cEEEEECCH
Confidence            999999999654 3 789999999999987 5788999999999999999999999999999999753   899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH-----HHHH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE-----TVAR  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe-----~~a~  264 (368)
                       ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||+|+|++..........    .....++     ....
T Consensus       129 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  203 (244)
T 4e4y_A          129 -QCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYAN----NVGISFDEAQKQEEKE  203 (244)
T ss_dssp             -GGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHH----HHTCCHHHHHHHHHTT
T ss_pred             -HHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhh----hcCCCHHHHHHHHhhc
Confidence             67788899999999999999999999999999999999999999999986432111000    0000111     1122


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..|+++++.+.||+++...+++|..+..||++.
T Consensus       204 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          204 FPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCcc
Confidence            345667788999999999999988888888888888763

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.5e-38  Score=291.75  Aligned_cols=246  Identities=21%  Similarity=0.278  Sum_probs=202.8

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.|++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++..                 .+.++.++.+
T Consensus        28 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   90 (279)
T 3ctm_A           28 DLFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT-----------------YGVHSKAYKC   90 (279)
T ss_dssp             GGGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH-----------------HCSCEEEEEC
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-----------------cCCcceEEEe
Confidence            34678999999999999999999999999999999999998877766665543                 2356889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCC-CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      |++|.++++++++++.+++|++|+||||||......++. +.+.+++++.+++|+.|++.+++.++|.|+++ +.++||+
T Consensus        91 Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~~~iv~  169 (279)
T 3ctm_A           91 NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKN-GKGSLII  169 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred             ecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEE
Confidence            999999999999999999999999999999875225666 78899999999999999999999999999876 5789999


Q ss_pred             EcCCCCCCCC--CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          186 MDGAGSGGSS--TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       186 isS~~~~~~~--~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      +||. ++..+  .+....|++||++++.|+++++.|++++| +||+|+||+++|++.....    ....      .....
T Consensus       170 isS~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~----~~~~------~~~~~  237 (279)
T 3ctm_A          170 TSSI-SGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFAS----KDMK------AKWWQ  237 (279)
T ss_dssp             ECCC-TTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCC----HHHH------HHHHH
T ss_pred             ECch-HhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccC----hHHH------HHHHH
Confidence            9987 45555  67788999999999999999999999999 9999999999999863211    0100      01112


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+.+++..+++++..+.|++++...+.+|..+..+|++
T Consensus       238 ~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          238 LTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             HSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             hCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            234566778899999999999987767777777777765

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=8e-39  Score=301.91  Aligned_cols=258  Identities=22%  Similarity=0.259  Sum_probs=202.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE---------eCChHHHHHHHHHHHHHhhhhhhhcCCCCccccc
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA---------SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLV   97 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~---------~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (368)
                      ..|++++|++|||||++|||+++|++|+++|++|+++         +|+.+++++..+++.+.                 
T Consensus         3 ~~~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~-----------------   65 (319)
T 1gz6_A            3 SPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR-----------------   65 (319)
T ss_dssp             CCCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT-----------------
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh-----------------
Confidence            3467899999999999999999999999999999996         45777888777777652                 


Q ss_pred             CceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635           98 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus        98 ~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      +..   ..+|++|.++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++++++|+|+++
T Consensus        66 ~~~---~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~  141 (319)
T 1gz6_A           66 GGK---AVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ  141 (319)
T ss_dssp             TCE---EEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCe---EEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence            222   257999999999999999999999999999999876 4677889999999999999999999999999999877


Q ss_pred             CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC
Q 017635          178 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  257 (368)
Q Consensus       178 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  257 (368)
                       +.++||++||. ++..+.++...|++||+++++|+++|+.|++++||+||+|+||++ |++.....             
T Consensus       142 -~~grIV~vsS~-~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~-------------  205 (319)
T 1gz6_A          142 -NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM-------------  205 (319)
T ss_dssp             -TCEEEEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS-------------
T ss_pred             -CCCEEEEECCh-hhccCCCCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC-------------
Confidence             57999999986 455566788999999999999999999999999999999999998 87643211             


Q ss_pred             CHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCC-------------Cccccchhhhhhhhhhcc
Q 017635          258 LPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ-------------GRALYAAEADRIRNWAEN  324 (368)
Q Consensus       258 ~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~-------------~~~~~~~~~~~l~~w~~~  324 (368)
                       ++..     .....|++++..+.||+++. .+.+|..+..+|++....             .....++..+++|++.+.
T Consensus       206 -~~~~-----~~~~~p~dvA~~~~~l~s~~-~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~  278 (319)
T 1gz6_A          206 -PEDL-----VEALKPEYVAPLVLWLCHES-CEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICD  278 (319)
T ss_dssp             -CHHH-----HHHSCGGGTHHHHHHHTSTT-CCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTC
T ss_pred             -Chhh-----hccCCHHHHHHHHHHHhCch-hhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhc
Confidence             0100     01235666666666776653 244566666666654321             222345566788887766


Q ss_pred             ccCc
Q 017635          325 RARF  328 (368)
Q Consensus       325 ~~~~  328 (368)
                      ....
T Consensus       279 ~~~~  282 (319)
T 1gz6_A          279 FSNA  282 (319)
T ss_dssp             CTTC
T ss_pred             cccc
Confidence            5543

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-38  Score=295.43  Aligned_cols=246  Identities=23%  Similarity=0.322  Sum_probs=196.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.+
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~  100 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----------------FGYESSGYAG  100 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----------------TTCCEEEEEC
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh-----------------cCCceeEEEC
Confidence            34577899999999999999999999999999999999999888877777653                 2457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||++
T Consensus       101 Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~i  178 (285)
T 2c07_A          101 DVSKKEEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINI  178 (285)
T ss_dssp             CTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEE
Confidence            999999999999999999999999999999876 5778889999999999999999999999999999876 46899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++...|++||++++.|+++++.|+++.||+|++|+||+++|++............          ....+
T Consensus       179 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----------~~~~~  247 (285)
T 2c07_A          179 SSI-VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNI----------ISNIP  247 (285)
T ss_dssp             CCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHH----------HTTCT
T ss_pred             CCh-hhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHH----------HhhCC
Confidence            987 4556678889999999999999999999999999999999999999998643211100000          00112


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++..+++++..+.|++++...+.+|..+..+|++
T Consensus       248 ~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          248 AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             CCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            334455666666666666665545555555555543

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=4.7e-38  Score=286.62  Aligned_cols=244  Identities=21%  Similarity=0.352  Sum_probs=195.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.+++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++++                 .+.++.++.+
T Consensus         5 ~~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~   67 (255)
T 1fmc_A            5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACRC   67 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cCCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH-----------------hCCceEEEEc
Confidence            45678999999999999999999999999999999999999888877777754                 2357888999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.++++++|+||||||... ..++ +.+.+++++.+++|+.+++++++.++|.|+++ +.++||++
T Consensus        68 D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~  144 (255)
T 1fmc_A           68 DITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTI  144 (255)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            999999999999999999999999999999876 3555 78999999999999999999999999999876 47899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++...|++||++++.+++.++.|++++||++++++||++.|++.......   ...      .......+
T Consensus       145 sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---~~~------~~~~~~~~  214 (255)
T 1fmc_A          145 TSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---EIE------QKMLQHTP  214 (255)
T ss_dssp             CCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---HHH------HHHHHTCS
T ss_pred             cch-hhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccCh---HHH------HHHHhcCC
Confidence            987 56667788899999999999999999999999999999999999999986432110   000      00011122


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCC
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  300 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  300 (368)
                      +.++..++|+++.+.|++++...+.++..+..+|
T Consensus       215 ~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g  248 (255)
T 1fmc_A          215 IRRLGQPQDIANAALFLCSPAASWVSGQILTVSG  248 (255)
T ss_dssp             SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             cccCCCHHHHHHHHHHHhCCccccCCCcEEEECC
Confidence            3344556666666666666544333344444433

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1e-38  Score=289.81  Aligned_cols=193  Identities=31%  Similarity=0.485  Sum_probs=155.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|++|||||++|||+++|++|+++|++|+++ .|+.+++++..+++++                 .+.++.++.+|
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D   63 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA-----------------AGINVVVAKGD   63 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH-----------------TTCCEEEEESC
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh-----------------cCCcEEEEECC
Confidence            45789999999999999999999999999999998 6777777777666654                 24578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++||++|
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~s  141 (247)
T 2hq1_A           64 VKNPEDVENMVKTAMDAFGRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQ-KSGKIINIT  141 (247)
T ss_dssp             TTSHHHHHHHHHHHHHHHSCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEc
Confidence            99999999999999999999999999999875 5677788899999999999999999999999999876 478999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      |. ++..+.+....|++||++++.|+++++.|++++||+||+++||+++|++..
T Consensus       142 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  194 (247)
T 2hq1_A          142 SI-AGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTD  194 (247)
T ss_dssp             C----------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred             Ch-hhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchh
Confidence            87 456677888999999999999999999999999999999999999999764

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.3e-38  Score=306.00  Aligned_cols=227  Identities=15%  Similarity=0.165  Sum_probs=186.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHH------------HHHHHHHHhhhhhhhcCCCCccccc
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRM------------TVTELEENLKEGMMAAGGSSKKNLV   97 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~-~G~~Vil~~R~~~~~~~------------~~~~l~~~~~~~~~~~~~~~~~~~~   97 (368)
                      ..+|++|||||++|||+++|+.|++ +|++|++++|+.+.+++            ..+++++                 .
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~-----------------~  121 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA-----------------A  121 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH-----------------T
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHh-----------------c
Confidence            3589999999999999999999999 99999999998654332            2233333                 3


Q ss_pred             CceeEEEeccCCCHHHHHHHHHHHHhHc-CCCCEEEEccCCC------------CCCCCC--------------------
Q 017635           98 HAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTN------------KGFKPL--------------------  144 (368)
Q Consensus        98 ~~~v~~~~~Dv~~~~~v~~~~~~i~~~~-g~iD~li~nAG~~------------~~~~~~--------------------  144 (368)
                      +.++..+.+|++|+++++++++++.+++ |+||+||||||..            ....++                    
T Consensus       122 G~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~  201 (422)
T 3s8m_A          122 GLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQAS  201 (422)
T ss_dssp             TCCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEE
T ss_pred             CCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccc
Confidence            5678899999999999999999999999 9999999999973            112344                    


Q ss_pred             -CCCCHHHHHHHHHhhchHHH-HHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHh
Q 017635          145 -LQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES  220 (368)
Q Consensus       145 -~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSKaal~~l~~~la~e~  220 (368)
                       .+.+.++|++++++|..+.+ .+++.+++.+..+ ++|+||++||. ++..+.|.+  .+|++||+|+.+|+++|+.|+
T Consensus       202 ~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~-~gG~IVniSSi-~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~El  279 (422)
T 3s8m_A          202 IEPASAQEIEDTITVMGGQDWELWIDALEGAGVLA-DGARSVAFSYI-GTEITWPIYWHGALGKAKVDLDRTAQRLNARL  279 (422)
T ss_dssp             ECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE-EEEEEEEEEEC-CCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhh-CCCEEEEEeCc-hhhccCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence             36899999999999999997 8888877654333 36899999998 466666666  899999999999999999999


Q ss_pred             CCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH--HHHHHhhhhhhhcccccceeeeccCHHH
Q 017635          221 KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE--TVARTLVPRIRVVKGSGKAINYLTPPRI  288 (368)
Q Consensus       221 ~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe--~~a~~~~~~~~~~~~~~~~~~~l~~~~~  288 (368)
                      +++|||||+|+||+|+|++......            .|.  .....++++.+.+++++..+.||+++..
T Consensus       280 a~~GIRVNaVaPG~i~T~~~~~ip~------------~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l  337 (422)
T 3s8m_A          280 AKHGGGANVAVLKSVVTQASAAIPV------------MPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL  337 (422)
T ss_dssp             HTTTCEEEEEEECCCCCTTGGGSTH------------HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred             CccCEEEEEEEcCCCcChhhhcCCC------------ChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence            9999999999999999998643211            121  2234578999999999999999999864

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=4.7e-38  Score=286.07  Aligned_cols=244  Identities=22%  Similarity=0.301  Sum_probs=195.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++..                  ..++.++.+|++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~D~~   64 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQIQFFQHDSS   64 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTT
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc------------------cCceEEEECCCC
Confidence            57899999999999999999999999999999999998877766555421                  146888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.|++.+++.++|.|++++.+++||++||.
T Consensus        65 ~~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  143 (251)
T 1zk4_A           65 DEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI  143 (251)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCc
Confidence            999999999999999999999999999876 5778889999999999999999999999999999877333899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                       ++..+.+....|++||++++.|+++++.|+.  +.||+|++|+||++.|++.......   .......      ...++
T Consensus       144 -~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~------~~~~~  213 (251)
T 1zk4_A          144 -EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA---EEAMSQR------TKTPM  213 (251)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH---HHHHTST------TTCTT
T ss_pred             -hhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCch---hhhHHHh------hcCCC
Confidence             5667778889999999999999999999988  8899999999999999986532110   0000000      01123


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.|++++...+.++..+..+|++
T Consensus       214 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CCCcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            34455666666666777665545555555555554

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.7e-38  Score=287.51  Aligned_cols=243  Identities=24%  Similarity=0.329  Sum_probs=192.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+++||||++|||+++|++|+++|++|++++|+.+++++..+++...                .+.++.++++|++|++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~~~~~   65 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHA----------------YADKVLRVRADVADEG   65 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTT----------------TGGGEEEEECCTTCHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCcEEEEEecCCCHH
Confidence            689999999999999999999999999999999998877766655211                2356889999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCC---CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKP---LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +++++++++.++++++|+||||||... ..+   +.+.+.+++++.+++|+.+++.+++.++|.|+++ +.++||++||.
T Consensus        66 ~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  143 (250)
T 2cfc_A           66 DVNAAIAATMEQFGAIDVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQ-GAGVIVNIASV  143 (250)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCh
Confidence            999999999999999999999999865 344   7788999999999999999999999999999876 47899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++...|++||++++.|+++++.|++++||+|++++||++.|++......  ......      ......++.+
T Consensus       144 -~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~------~~~~~~~~~~  214 (250)
T 2cfc_A          144 -ASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD--QPELRD------QVLARIPQKE  214 (250)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT--SHHHHH------HHHTTCTTCS
T ss_pred             -hhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC--CHHHHH------HHHhcCCCCC
Confidence             5667778889999999999999999999999999999999999999998642110  000000      0001122334


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +..++++++.+.|++++...+.++..+..+|++
T Consensus       215 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          215 IGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             CBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             CcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            455666666666666655444455555555543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.3e-37  Score=291.13  Aligned_cols=251  Identities=21%  Similarity=0.234  Sum_probs=198.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .+.+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                .+.++.+++
T Consensus        19 ~~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~   82 (302)
T 1w6u_A           19 LPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ----------------TGNKVHAIQ   82 (302)
T ss_dssp             SCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEEE
T ss_pred             CCcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh----------------cCCceEEEE
Confidence            3456789999999999999999999999999999999999999888887777653                135788999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.++++++++++.+++|++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|.++.+.++||+
T Consensus        83 ~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~  161 (302)
T 1w6u_A           83 CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLS  161 (302)
T ss_dssp             CCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             eCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            9999999999999999999999999999999876 577788999999999999999999999999999985446789999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc-ccccCcccchhhhhhhhcCCHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD-LLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      +||. .+..+.+....|++||++++.|+++++.+++++||+|++|+||++.|+ +......... ..       ......
T Consensus       162 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~-------~~~~~~  232 (302)
T 1w6u_A          162 ITTI-YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGT-FE-------KEMIGR  232 (302)
T ss_dssp             ECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSH-HH-------HHHHTT
T ss_pred             Eccc-ccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchh-hH-------HHHHhc
Confidence            9987 455667888999999999999999999999999999999999999998 4322111000 00       000111


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .++.++..+++++..+.|++++...+.++..+..+|++
T Consensus       233 ~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  270 (302)
T 1w6u_A          233 IPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGE  270 (302)
T ss_dssp             CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCe
Confidence            22334455666666667777665544455555555543

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=7e-40  Score=310.65  Aligned_cols=264  Identities=14%  Similarity=0.104  Sum_probs=200.9

Q ss_pred             CCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++|++|||||++  |||+++|++|+++|++|++++|++...  +...-.+.........   .........+.+++||++
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~--l~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~Dv~   75 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN--IFMKNYKNGKFDNDMI---IDKDKKMNILDMLPFDAS   75 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHH--HHHHHHHTTTTTGGGB---CSSSCBCCEEEEEECCTT
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCcccc--ccccchHHHHHHHHHH---Hhhccccccccccccccc
Confidence            479999999986  999999999999999999998875320  0000000000000000   000011235788899998


Q ss_pred             CH--H------------------HHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHHHHH
Q 017635          110 EP--A------------------DVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSILCTR  168 (368)
Q Consensus       110 ~~--~------------------~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  168 (368)
                      +.  +                  +++++++++.+++|++|+||||||+.. ...++.+.+.++|++++++|+.|++++++
T Consensus        76 ~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            88  7                  999999999999999999999999742 35788899999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCCCCCCCCCCch-hhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccCccc
Q 017635          169 EAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA-VYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGSTI  246 (368)
Q Consensus       169 ~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~-~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~~  246 (368)
                      +++|+|+++   |+||++||. ++..+.+... .|++||+|+.+|+++|+.|+++ +||+||+|+||+|+|+|.......
T Consensus       156 ~~~p~m~~~---g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~  231 (329)
T 3lt0_A          156 YFVNIMKPQ---SSIISLTYH-ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKL  231 (329)
T ss_dssp             HHGGGEEEE---EEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--
T ss_pred             HHHHHHhhC---CeEEEEeCc-cccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhh
Confidence            999999864   899999997 5777888885 9999999999999999999998 899999999999999997653210


Q ss_pred             ch-------------hhh-hhh---hcC------------------CHHHHHHHhhhhhhhcccccceeeeccCHHHHHH
Q 017635          247 QN-------------KQM-FNI---ICE------------------LPETVARTLVPRIRVVKGSGKAINYLTPPRILLA  291 (368)
Q Consensus       247 ~~-------------~~~-~~~---~~~------------------~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~  291 (368)
                      ..             ... ...   ...                  ........+++++..|++++..+.||+++...++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~i  311 (329)
T 3lt0_A          232 NNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAI  311 (329)
T ss_dssp             ----------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             cccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccc
Confidence            00             000 000   000                  0112234566788899999999999999999999


Q ss_pred             HhhhhhcCCceec
Q 017635          292 LVTAWLRRGRWFD  304 (368)
Q Consensus       292 ~~~~~~~~g~~~~  304 (368)
                      +|..+..||++..
T Consensus       312 tG~~i~vdGG~~~  324 (329)
T 3lt0_A          312 TGQTIYVDNGLNI  324 (329)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEEcCCeeE
Confidence            9999999998854

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1e-37  Score=297.19  Aligned_cols=228  Identities=13%  Similarity=0.091  Sum_probs=187.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHH------------HHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVR------------MTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~-~G~~Vil~~R~~~~~~------------~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      ...+|++|||||++|||+++|+.|++ +|++|++++|+.+..+            ...+++++                 
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~-----------------  106 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ-----------------  106 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHH-----------------
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHh-----------------
Confidence            45789999999999999999999999 9999999998765432            12223332                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCC------------CCCCC--------------------
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK------------GFKPL--------------------  144 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~------------~~~~~--------------------  144 (368)
                      .+.++..+.+|++|+++++++++++.+++|+||+||||||...            ..+++                    
T Consensus       107 ~G~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~  186 (405)
T 3zu3_A          107 KGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESV  186 (405)
T ss_dssp             TTCCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEE
T ss_pred             cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccccccc
Confidence            3457888999999999999999999999999999999999841            13454                    


Q ss_pred             -CCCCHHHHHHHHHhhchHHH-HHHHHHHHH-HHcCCCCcEEEEEcCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHH
Q 017635          145 -LQFTNEEIEQIVSTNLVGSI-LCTREAMRV-MRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKE  219 (368)
Q Consensus       145 -~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~-m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSKaal~~l~~~la~e  219 (368)
                       .+.+.++|++++++|..+.+ .+++++++. |++  ++|+||++||. ++..+.|.+  .+|++||+|+++|+++|+.|
T Consensus       187 i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~--~gG~IVniSSi-~~~~~~p~~~~~aY~AaKaal~~ltrsLA~E  263 (405)
T 3zu3_A          187 LQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLA--EGAQTTAFTYL-GEKITHDIYWNGSIGAAKKDLDQKVLAIRES  263 (405)
T ss_dssp             ECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEE--EEEEEEEEECC-CCGGGTTTTTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhh--CCcEEEEEeCc-hhhCcCCCccchHHHHHHHHHHHHHHHHHHH
Confidence             77899999999999999998 788887754 543  36999999998 566677777  99999999999999999999


Q ss_pred             hCCC-CeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHH
Q 017635          220 SKRS-KVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR  287 (368)
Q Consensus       220 ~~~~-gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~  287 (368)
                      ++++ |||||+|+||+|.|++.......  .        .-......++++.+.+++++..+.||+++.
T Consensus       264 la~~~GIRVNaVaPG~i~T~~s~~ip~~--p--------~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd~  322 (405)
T 3zu3_A          264 LAAHGGGDARVSVLKAVVSQASSAIPMM--P--------LYLSLLFKVMKEKGTHEGCIEQVYSLYKDS  322 (405)
T ss_dssp             HHTTTSCEEEEEECCCCCCHHHHTSTTH--H--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred             hCcccCeEEEEEEeCCCcCchhhcCCCC--c--------HHHHHHHHHHhcCCCcHHHHHHHHHHHhcc
Confidence            9999 99999999999999986432210  0        012223457899999999999999999983

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.5e-37  Score=286.93  Aligned_cols=250  Identities=23%  Similarity=0.325  Sum_probs=194.9

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      ..+.+++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.                  ...++.++
T Consensus         8 ~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~   69 (278)
T 2bgk_A            8 DSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIG------------------SPDVISFV   69 (278)
T ss_dssp             ---CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC------------------CTTTEEEE
T ss_pred             CCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhC------------------CCCceEEE
Confidence            345567899999999999999999999999999999999999877665555441                  11268889


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      .+|++|+++++++++++.++++++|+||||||.... ..++.+.+.+++++.+++|+.+++++++.++|.|+++ +.++|
T Consensus        70 ~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~i  148 (278)
T 2bgk_A           70 HCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSI  148 (278)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEE
T ss_pred             ECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-CCCeE
Confidence            999999999999999999999999999999998642 2567889999999999999999999999999999876 57899


Q ss_pred             EEEcCCCCCCCCCC-CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          184 FNMDGAGSGGSSTP-LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       184 v~isS~~~~~~~~~-~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      |++||. .+..+.+ ....|++||+++++++++++.|++++||+|++|+||++.|++.......... ..       +..
T Consensus       149 v~isS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~-------~~~  219 (278)
T 2bgk_A          149 VFTASI-SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS-RV-------EEL  219 (278)
T ss_dssp             EEECCG-GGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHH-HH-------HHH
T ss_pred             EEEeec-cccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchh-HH-------HHh
Confidence            999987 4555666 7889999999999999999999999999999999999999986543211110 00       000


Q ss_pred             HH---HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          263 AR---TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       263 a~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..   .+..+...++++++.+.|++++...+.++..+..+|++
T Consensus       220 ~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  262 (278)
T 2bgk_A          220 AHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGY  262 (278)
T ss_dssp             HHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcc
Confidence            00   01233445566666666666665544555555555544

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1e-38  Score=324.68  Aligned_cols=232  Identities=22%  Similarity=0.276  Sum_probs=189.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---------HHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS---------ESVRMTVTELEENLKEGMMAAGGSSKKNLVH   98 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   98 (368)
                      .+++++|++|||||++|||+++|++|+++|++|++++|+.         ++++++.+++.+                 .+
T Consensus         3 ~~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-----------------~g   65 (604)
T 2et6_A            3 PVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK-----------------NG   65 (604)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH-----------------TT
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh-----------------cC
Confidence            3578999999999999999999999999999999998765         566666677654                 22


Q ss_pred             ceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 017635           99 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  178 (368)
Q Consensus        99 ~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  178 (368)
                      .++   .+|++|.++++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ 
T Consensus        66 ~~~---~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~-  140 (604)
T 2et6_A           66 GVA---VADYNNVLDGDKIVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQ-  140 (604)
T ss_dssp             CEE---EEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             CeE---EEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-
Confidence            333   35888888899999999999999999999999876 5788999999999999999999999999999999887 


Q ss_pred             CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCC
Q 017635          179 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       179 ~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      +.|+||++||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+|| +.|+|......   ....      
T Consensus       141 ~~G~IVnisS~-ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~---~~~~------  209 (604)
T 2et6_A          141 KYGRIVNTSSP-AGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP---PPML------  209 (604)
T ss_dssp             TCEEEEEECCH-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC---HHHH------
T ss_pred             CCCEEEEECCH-HHcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC---hhhh------
Confidence            57999999987 5667788999999999999999999999999999999999998 68987532110   0000      


Q ss_pred             HHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          259 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                                ....|++++..+.||+++. .+++|..+..+|++.
T Consensus       210 ----------~~~~pe~vA~~v~~L~s~~-~~itG~~~~vdgG~~  243 (604)
T 2et6_A          210 ----------EKLGPEKVAPLVLYLSSAE-NELTGQFFEVAAGFY  243 (604)
T ss_dssp             ----------TTCSHHHHHHHHHHHTSSS-CCCCSCEEEEETTEE
T ss_pred             ----------ccCCHHHHHHHHHHHhCCc-ccCCCCEEEECCCeE
Confidence                      1124555556666777776 677777887777653

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=3.1e-38  Score=286.05  Aligned_cols=190  Identities=27%  Similarity=0.484  Sum_probs=171.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|+++||||++|||+++|++|+++|++|++ .+|+.++.++..+++++                 .+.++.++++|++|+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~~~~   63 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-----------------YGGQAITFGGDVSKE   63 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------HTCEEEEEECCTTSH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCcEEEEeCCCCCH
Confidence            589999999999999999999999999998 48998888777777654                 235788999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.+++|++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|+|+++ +.++||++||. +
T Consensus        64 ~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~-~  140 (244)
T 1edo_A           64 ADVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV-V  140 (244)
T ss_dssp             HHHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-H
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCCEEEEECCh-h
Confidence            9999999999999999999999999876 5777889999999999999999999999999999876 57899999987 4


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +..+.+....|++||+++++|+++++.|+.++||+|++|+||++.|++...
T Consensus       141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  191 (244)
T 1edo_A          141 GLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAK  191 (244)
T ss_dssp             HHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred             hcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence            556677889999999999999999999999999999999999999998643

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=4.9e-38  Score=285.34  Aligned_cols=194  Identities=29%  Similarity=0.433  Sum_probs=174.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+++++..+++.+.                .+.++.++.+|+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~D~   66 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK----------------YGVKAHGVEMNL   66 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------------HCCCEEEEECCT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh----------------cCCceEEEEccC
Confidence            4678999999999999999999999999999999999998888777766542                134688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS  144 (248)
T 2pnf_A           67 LSEESINKAFEEIYNLVDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISS  144 (248)
T ss_dssp             TCHHHHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            9999999999999999999999999999876 5677889999999999999999999999999999876 5789999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      . .+..+.++...|++||++++.++++++.|++++||+|++++||++.|++..
T Consensus       145 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~  196 (248)
T 2pnf_A          145 V-VGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA  196 (248)
T ss_dssp             H-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGG
T ss_pred             H-HhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhh
Confidence            6 345566788999999999999999999999999999999999999999864

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.6e-38  Score=288.28  Aligned_cols=200  Identities=20%  Similarity=0.293  Sum_probs=170.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+....          ......++.++.+|++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~D~~   73 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSK----------EGPPRGNHAAFQADVS   73 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC----------------------CCEEEECCTT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCcc----------ccccCcceEEEEecCC
Confidence            468899999999999999999999999999999999998877766655431100          0001146788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCC-CEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSI-DIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~i-D~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |.++++++++.+.+++|++ |+||||||... ..++.+.+.+++++.+++|+.|+++++++++|.|.+++..++||++||
T Consensus        74 ~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  152 (264)
T 2pd6_A           74 EARAARCLLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISS  152 (264)
T ss_dssp             SHHHHHHHHHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECC
Confidence            9999999999999999999 99999999876 577888999999999999999999999999999987633689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      . .+..+.++...|++||++++.|+++++.|++++||+|++|+||++.|++..
T Consensus       153 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~  204 (264)
T 2pd6_A          153 I-VGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQ  204 (264)
T ss_dssp             T-HHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--
T ss_pred             h-hhccCCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchh
Confidence            7 455677888999999999999999999999999999999999999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.4e-38  Score=320.78  Aligned_cols=231  Identities=24%  Similarity=0.337  Sum_probs=192.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||+++|++|+++|++|++.+|+.  ++++.+++++                 .+.++..+.+|+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~-----------------~g~~~~~~~~Dv  378 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKA-----------------AGGEAWPDQHDV  378 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHH-----------------TTCEEEEECCCH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHh-----------------cCCeEEEEEcCh
Confidence            468899999999999999999999999999999998742  3445556654                 235677788888


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +  ++++++++++.+++|+||+||||||+.. ..++.+++.++|++++++|+.|+++++|+++|+|+++ ++|+||++||
T Consensus       379 ~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~IVnisS  454 (604)
T 2et6_A          379 A--KDSEAIIKNVIDKYGTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEK-QFGRIINITS  454 (604)
T ss_dssp             H--HHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             H--HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECC
Confidence            4  5567888999999999999999999976 5788999999999999999999999999999999887 5799999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||. +|+|......              ++     ..
T Consensus       455 ~-ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~--------------~~-----~~  513 (604)
T 2et6_A          455 T-SGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMR--------------EQ-----DK  513 (604)
T ss_dssp             H-HHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------------C
T ss_pred             h-hhccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCc--------------hh-----hc
Confidence            7 56677889999999999999999999999999999999999995 9998542110              00     01


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ....|++++..+.||+++... ++|..+..+|++..
T Consensus       514 ~~~~pe~vA~~v~~L~s~~~~-itG~~~~vdGG~~~  548 (604)
T 2et6_A          514 NLYHADQVAPLLVYLGTDDVP-VTGETFEIGGGWIG  548 (604)
T ss_dssp             CSSCGGGTHHHHHHTTSTTCC-CCSCEEEEETTEEE
T ss_pred             cCCCHHHHHHHHHHHhCCccC-CCCcEEEECCCeeE
Confidence            123678888888999998887 89999999888743

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=281.02  Aligned_cols=222  Identities=23%  Similarity=0.297  Sum_probs=191.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++                 .+.++.++.+
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~   87 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----------------LGAKVHTFVV   87 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh-----------------cCCeEEEEEe
Confidence            45678999999999999999999999999999999999999888887777765                 2457889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||++
T Consensus        88 Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~i  165 (272)
T 1yb1_A           88 DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTV  165 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEE
T ss_pred             eCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCEEEEE
Confidence            999999999999999999999999999999876 5677788899999999999999999999999999887 57999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA  263 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a  263 (368)
                      ||. ++..+.+....|++||+++++|+++++.|+.   +.||+|++|+||+|+|++....    ....  ....+|+++|
T Consensus       166 sS~-~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~--~~~~~~~dva  238 (272)
T 1yb1_A          166 ASA-AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----STSL--GPTLEPEEVV  238 (272)
T ss_dssp             CCC-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----HHHH--CCCCCHHHHH
T ss_pred             ech-hhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc----cccc--cCCCCHHHHH
Confidence            987 5666667788999999999999999999996   6799999999999999985421    0111  1124799999


Q ss_pred             HHhhhhhhhcc
Q 017635          264 RTLVPRIRVVK  274 (368)
Q Consensus       264 ~~~~~~~~~~~  274 (368)
                      +.++..+..+.
T Consensus       239 ~~i~~~~~~~~  249 (272)
T 1yb1_A          239 NRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHcCC
Confidence            99988776443

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.3e-38  Score=290.97  Aligned_cols=234  Identities=16%  Similarity=0.200  Sum_probs=191.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+ +.+.                 +.++..+     |.++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~-----------------~~~~~~~-----d~~~   58 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET-----------------YPQLKPM-----SEQE   58 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH-----------------CTTSEEC-----CCCS
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc-----------------CCcEEEE-----CHHH
Confidence            789999999999999999999999999999999888776544 5431                 2233332     6677


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.+++|++|+||||||+.....++.+.+.++|++.+++|+.|+++++++++|+|+++ +.|+||++||. ++.
T Consensus        59 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~-~~~  136 (254)
T 1zmt_A           59 PAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSA-TPF  136 (254)
T ss_dssp             HHHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCS-TTT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECCc-ccc
Confidence            8899999999999999999999987225788899999999999999999999999999999876 47999999987 567


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc---------cCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV---------LTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v---------~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      .+.+....|++||+++++|+++++.|++++||+||+|+||+|         +|++.....     ...      ......
T Consensus       137 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~-----~~~------~~~~~~  205 (254)
T 1zmt_A          137 GPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNP-----EHV------AHVKKV  205 (254)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCH-----HHH------HHHHHH
T ss_pred             cCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccCh-----HHH------HHHhcc
Confidence            778889999999999999999999999999999999999999         666543210     000      111122


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++++..+++++..+.||+++...+++|..+..+|++.
T Consensus       206 ~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          206 TALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             SSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCch
Confidence            345566778888888889988877788888888888764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=4e-36  Score=272.29  Aligned_cols=214  Identities=27%  Similarity=0.440  Sum_probs=186.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      +|++|||||++|||+++|++|+++|+       +|++++|+.++++++.+++..                 .+.++.++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~   64 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----------------EGALTDTIT   64 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----------------TTCEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc-----------------cCCeeeEEE
Confidence            68999999999999999999999999       999999999888777766643                 245789999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|+|+++ +.++||+
T Consensus        65 ~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~  142 (244)
T 2bd0_A           65 ADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFF  142 (244)
T ss_dssp             CCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEE
Confidence            9999999999999999999999999999999876 5778889999999999999999999999999999876 5799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++...|++||+++++|+++++.|++++||+|++|+||+|.|++........     ......|+++|+.
T Consensus       143 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----~~~~~~~~dva~~  216 (244)
T 2bd0_A          143 ITSV-AATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----QALMMMPEDIAAP  216 (244)
T ss_dssp             ECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----GGGSBCHHHHHHH
T ss_pred             Eecc-hhcCCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----cccCCCHHHHHHH
Confidence            9987 566778888999999999999999999999999999999999999999875422111     1123468888887


Q ss_pred             hhhhhh
Q 017635          266 LVPRIR  271 (368)
Q Consensus       266 ~~~~~~  271 (368)
                      ++..+.
T Consensus       217 ~~~l~~  222 (244)
T 2bd0_A          217 VVQAYL  222 (244)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            776554

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-37  Score=288.17  Aligned_cols=253  Identities=23%  Similarity=0.373  Sum_probs=203.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+....            ..+.++.++.+|
T Consensus        13 ~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~D   80 (303)
T 1yxm_A           13 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPP------------TKQARVIPIQCN   80 (303)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCT------------TCCCCEEEEECC
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccc------------cCCccEEEEecC
Confidence            34688999999999999999999999999999999999999888888877652110            023578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++.+++|++|+||||||... ..++.+.+.+++++.+++|+.|+++++++++|.+.++ ++++||++|
T Consensus        81 ~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~iv~is  158 (303)
T 1yxm_A           81 IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNII  158 (303)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-cCCeEEEEE
Confidence            99999999999999999999999999999765 5677889999999999999999999999999976554 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. + ..+.+....|+++|+++++++++++.|+.++||+|++|+||+|.|++...............      .....+.
T Consensus       159 S~-~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~------~~~~~p~  230 (303)
T 1yxm_A          159 VP-T-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEG------SFQKIPA  230 (303)
T ss_dssp             CC-C-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTT------GGGGSTT
T ss_pred             ee-c-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHH------HHhcCcc
Confidence            87 3 66778889999999999999999999999999999999999999995322111100111000      0011234


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++..+++++..+.|++++...+.+|..+..+|++
T Consensus       231 ~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          231 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR  265 (303)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cCCCCHHHHHHHHHHHhCcccccCCCcEEEECCCe
Confidence            45567777777778888777666777777777765

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=3.5e-36  Score=275.93  Aligned_cols=194  Identities=24%  Similarity=0.292  Sum_probs=168.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.|++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++                    +.++.++.+
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~   65 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--------------------GNNCVFAPA   65 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--------------------CTTEEEEEC
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--------------------CCceEEEEc
Confidence            346789999999999999999999999999999999999988877665544                    236788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCC------CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL------QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--  178 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--  178 (368)
                      |++|+++++++++++.+++|++|+||||||... ..++.      +.+.+++++.+++|+.+++++++.++|.|+++.  
T Consensus        66 D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~  144 (265)
T 2o23_A           66 DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPD  144 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999875 33333      378999999999999999999999999998752  


Q ss_pred             ---CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          179 ---KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       179 ---~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                         +.++||++||. .+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|++...
T Consensus       145 ~~~~~~~iv~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  210 (265)
T 2o23_A          145 QGGQRGVIINTASV-AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS  210 (265)
T ss_dssp             TTSCCEEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----
T ss_pred             cCCCCcEEEEeCCh-hhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc
Confidence               46899999987 4556778889999999999999999999999999999999999999998653

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.8e-37  Score=283.07  Aligned_cols=244  Identities=21%  Similarity=0.294  Sum_probs=200.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|++|||||++|||++++++|+++|++|++++|+ .+++++..++++.                 .+.++.++.+|+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------------~~~~~~~~~~D~   66 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA-----------------DGGDAAFFAADL   66 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh-----------------cCCceEEEECCC
Confidence            4678999999999999999999999999999999999 8888777777654                 245788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCC-CCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC----CCcEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGT-NKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHI  183 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~-~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~----~~g~I  183 (368)
                      +|+++++++++++.+++|++|+||||||. .. ..++.+.+.+++++.+++|+.+++++++.++|.|++++    ..++|
T Consensus        67 ~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (258)
T 3afn_B           67 ATSEACQQLVDEFVAKFGGIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAV  145 (258)
T ss_dssp             TSHHHHHHHHHHHHHHHSSCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCC-cCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEE
Confidence            99999999999999999999999999998 44 57788899999999999999999999999999997542    12899


Q ss_pred             EEEcCCCCCCC-CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          184 FNMDGAGSGGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       184 v~isS~~~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      |++||. .+.. +.++...|++||++++.+++.++.|++++||+|++|+||++.|++.....    .....      ...
T Consensus       146 v~~sS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~------~~~  214 (258)
T 3afn_B          146 ISTGSI-AGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKT----QDVRD------RIS  214 (258)
T ss_dssp             EEECCT-HHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCC----HHHHH------HHH
T ss_pred             EEecch-hhccCCCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccC----HHHHH------HHh
Confidence            999987 3444 67788999999999999999999999999999999999999999864321    01000      000


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHH-HHHhhhhhcCCce
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRIL-LALVTAWLRRGRW  302 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~g~~  302 (368)
                      ...++.++..++++++.+.+++++... +.++..+..+|++
T Consensus       215 ~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~  255 (258)
T 3afn_B          215 NGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ  255 (258)
T ss_dssp             TTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred             ccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence            112345567788899999999888765 6666666666654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=9.8e-36  Score=268.17  Aligned_cols=211  Identities=28%  Similarity=0.385  Sum_probs=174.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ..+|+++||||++|||++++++|+++|++|++++|+.+++++..+++                     .++.++.+|++|
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~~~   61 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---------------------EGALPLPGDVRE   61 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---------------------hhceEEEecCCC
Confidence            45789999999999999999999999999999999988766554332                     146788999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++++.+.++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||++||. 
T Consensus        62 ~~~~~~~~~~~~~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~-  138 (234)
T 2ehd_A           62 EGDWARAVAAMEEAFGELSALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSL-  138 (234)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCT-
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCc-
Confidence            99999999999999999999999999876 5778889999999999999999999999999999877 57999999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      ++..+.++...|++||++++.++++++.|++++||++++|+||+++|++......    .. .  ..+|+++|+.++..+
T Consensus       139 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~-~--~~~~~dvA~~~~~l~  211 (234)
T 2ehd_A          139 AGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTPG----QA-W--KLKPEDVAQAVLFAL  211 (234)
T ss_dssp             TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------CCHHHHHHHHHHHH
T ss_pred             hhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccccc----cc-C--CCCHHHHHHHHHHHh
Confidence            5667778889999999999999999999999999999999999999998643211    11 1  247899988887666


Q ss_pred             hh
Q 017635          271 RV  272 (368)
Q Consensus       271 ~~  272 (368)
                      ..
T Consensus       212 ~~  213 (234)
T 2ehd_A          212 EM  213 (234)
T ss_dssp             HS
T ss_pred             CC
Confidence            44

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=9.6e-38  Score=307.45  Aligned_cols=241  Identities=18%  Similarity=0.248  Sum_probs=197.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|++|||||++|||+++|++|+++|++|++++|+... ++. +++.+.                  ..+.++.||+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l-~~~~~~------------------~~~~~~~~Dv  268 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDL-KRVADK------------------VGGTALTLDV  268 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHH-HHHHHH------------------HTCEEEECCT
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHH-HHHHHH------------------cCCeEEEEec
Confidence            34689999999999999999999999999999999997532 112 222111                  1345789999


Q ss_pred             CCHHHHHHHHHHHHhHcCC-CCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFGS-IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~-iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +|.++++++++++.+++|+ ||+||||||+.. ..++.+.+.++|++++++|+.|++++++.++|.|+++ +.++||++|
T Consensus       269 td~~~v~~~~~~~~~~~g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~-~~g~iV~iS  346 (454)
T 3u0b_A          269 TADDAVDKITAHVTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIG-EGGRVIGLS  346 (454)
T ss_dssp             TSTTHHHHHHHHHHHHSTTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSC-TTCEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEEe
Confidence            9999999999999999986 999999999987 6888999999999999999999999999999999876 579999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH-HHh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA-RTL  266 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a-~~~  266 (368)
                      |. ++..+.+++..|++||+++++|+++++.|++++||+||+|+||+|+|+|........           .+... ...
T Consensus       347 S~-a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----------~~~~~~~~~  414 (454)
T 3u0b_A          347 SM-AGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT-----------REVGRRLNS  414 (454)
T ss_dssp             CH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC---------------------CHHHHHSBT
T ss_pred             Ch-HhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh-----------HHHHHhhcc
Confidence            97 567788899999999999999999999999999999999999999999875322111           11111 123


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +.+...|+|+++.+.||+++...+++|..+..+|++.
T Consensus       415 l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          415 LFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             TSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSBS
T ss_pred             ccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCccc
Confidence            4556678889999999999999899999998888763

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=2.2e-36  Score=272.04  Aligned_cols=207  Identities=20%  Similarity=0.248  Sum_probs=167.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.++.+|++|.++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~D~~~~~~   61 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL--------------------SNNVGYRARDLASHQE   61 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC--------------------SSCCCEEECCTTCHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH--------------------hhccCeEeecCCCHHH
Confidence            78999999999999999999999999999999998877655543                    2467889999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.+.   .|+||||||... ..++.+.+.++|++.+++|+.|++++++.++|.|+++  +++||++||. ++.
T Consensus        62 v~~~~~~~~~~---~d~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~iv~isS~-~~~  134 (230)
T 3guy_A           62 VEQLFEQLDSI---PSTVVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQ--PVNVVMIMST-AAQ  134 (230)
T ss_dssp             HHHHHHSCSSC---CSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS--CCEEEEECCG-GGT
T ss_pred             HHHHHHHHhhc---CCEEEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEeec-ccC
Confidence            99998876543   499999999876 6888899999999999999999999999999999876  3499999987 577


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      .+.+....|++||+|+++|+++++.|++++||+||+|+||+|+|++.........    .....+||++|+.++..+.
T Consensus       135 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----~~~~~~~~dvA~~i~~l~~  208 (230)
T 3guy_A          135 QPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSLD----TSSFMSAEDAALMIHGALA  208 (230)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------CCCHHHHHHHHHHHCC
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcCCCCC----cccCCCHHHHHHHHHHHHh
Confidence            7888999999999999999999999999999999999999999998754322111    1112357777777665443

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=3.2e-37  Score=279.56  Aligned_cols=238  Identities=21%  Similarity=0.287  Sum_probs=184.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||++++++|+++|++|++++|+.++++++.+++                     ..+.++.+|+
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~   61 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------------------PGIEPVCVDL   61 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---------------------CCCCEEEEeC
Confidence            5688999999999999999999999999999999999988766544332                     1245579999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++    +++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.++|.|++++..++||++||
T Consensus        62 ~~~~~~~~~~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 3d3w_A           62 GDWEATERALG----SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS  136 (244)
T ss_dssp             TCHHHHHHHHT----TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHHH----HcCCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCc
Confidence            99999988776    5689999999999876 577888999999999999999999999999999987633689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.++...|++||++++.++++++.|++++||+|++|+||+|.|++....... . ...      .......+.+
T Consensus       137 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~-~-~~~------~~~~~~~~~~  207 (244)
T 3d3w_A          137 Q-CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD-P-HKA------KTMLNRIPLG  207 (244)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS-T-THH------HHHHHTCTTC
T ss_pred             h-hhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC-h-HHH------HHHHhhCCCC
Confidence            7 56677788899999999999999999999999999999999999999986421110 0 000      0001112233


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                      +...++++++.+.+++++...+.++..+..+|+
T Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            444556666666666665544444544555444

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=2.8e-37  Score=279.79  Aligned_cols=190  Identities=25%  Similarity=0.402  Sum_probs=170.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE-EeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG-IACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~Dv~~  110 (368)
                      +|+++||||++|||+++|++|+++|++|+++ +|+.+++++..+++..                 .+.++.. +.+|++|
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~~~~D~~~   63 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR-----------------RGSPLVAVLGANLLE   63 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCSCEEEEECCTTS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-----------------cCCceEEEEeccCCC
Confidence            4799999999999999999999999999998 8998888877777654                 2345566 8999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|+++ +.++||++||. 
T Consensus        64 ~~~~~~~~~~~~~~~~~~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~sS~-  140 (245)
T 2ph3_A           64 AEAATALVHQAAEVLGGLDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKA-RFGRIVNITSV-  140 (245)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhc-CCCEEEEEeCh-
Confidence            99999999999999999999999999876 5677889999999999999999999999999999876 47899999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ++..+.+....|++||++++.++++++.|+.++||++++|+||++.|++...
T Consensus       141 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  192 (245)
T 2ph3_A          141 VGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER  192 (245)
T ss_dssp             HHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred             hhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence            4555677889999999999999999999999999999999999999998643

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-35  Score=272.35  Aligned_cols=194  Identities=25%  Similarity=0.421  Sum_probs=173.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++++..               ...++.++.+|++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl~   93 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---------------YPGTLIPYRCDLS   93 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------CSSEEEEEECCTT
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcC---------------CCceEEEEEecCC
Confidence            5789999999999999999999999999999999999988888777775521               1246888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS  188 (368)
                      |+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|++++. +++||++||
T Consensus        94 ~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS  172 (279)
T 1xg5_A           94 NEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  172 (279)
T ss_dssp             CHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CHHHHHHHHHHHHHhCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence            999999999999999999999999999876 577888999999999999999999999999999998732 489999998


Q ss_pred             CCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCccc
Q 017635          189 AGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~--~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~  240 (368)
                      .. +.  .+.+....|++||++++.|++.++.|++  +.||+|++|+||+|+|++.
T Consensus       173 ~~-~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~  227 (279)
T 1xg5_A          173 MS-GHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA  227 (279)
T ss_dssp             GG-GTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH
T ss_pred             hh-hcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh
Confidence            73 44  4667788999999999999999999998  8899999999999999984

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=5.3e-38  Score=296.38  Aligned_cols=254  Identities=17%  Similarity=0.165  Sum_probs=165.5

Q ss_pred             cCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCCh-----------HHHHH-----------HHHHHHHHhhhh
Q 017635           29 CKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSS-----------ESVRM-----------TVTELEENLKEG   84 (368)
Q Consensus        29 ~~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~-----------~~~~~-----------~~~~l~~~~~~~   84 (368)
                      |++++|++|||||  ++|||+++|++|+++|++|++++|++           +++++           +.+++.+..   
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   81 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKP---   81 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcc---
Confidence            5688999999999  89999999999999999999998753           12211           111111100   


Q ss_pred             hhhcCCCCcccccCceeEEEec------------cCCC--------HHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCC
Q 017635           85 MMAAGGSSKKNLVHAKVAGIAC------------DVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKP  143 (368)
Q Consensus        85 ~~~~~~~~~~~~~~~~v~~~~~------------Dv~~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~  143 (368)
                           .      ......++.+            |++|        +++++++++++.+++|++|+||||||+.. ...+
T Consensus        82 -----~------~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~  150 (319)
T 2ptg_A           82 -----V------DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKP  150 (319)
T ss_dssp             --------------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSC
T ss_pred             -----c------cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCc
Confidence                 0      0000123333            3333        45899999999999999999999999753 2467


Q ss_pred             CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC
Q 017635          144 LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR  222 (368)
Q Consensus       144 ~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSKaal~~l~~~la~e~~~  222 (368)
                      +.+.+.++|++.+++|+.|+++++++++|+|++   +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++
T Consensus       151 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~  226 (319)
T 2ptg_A          151 LLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE---GGSALALSYI-ASEKVIPGYGGGMSSAKAALESDCRTLAFEAGR  226 (319)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEEEC-C------------------THHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc---CceEEEEecc-ccccccCccchhhHHHHHHHHHHHHHHHHHhcc
Confidence            888999999999999999999999999999964   3899999987 566667777 68999999999999999999985


Q ss_pred             -CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH-HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCC
Q 017635          223 -SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRG  300 (368)
Q Consensus       223 -~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g  300 (368)
                       +||+||+|+||+|+|++..............   ...+. ....+++++..|++++..+.||+++...+++|..+..||
T Consensus       227 ~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~---~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG  303 (319)
T 2ptg_A          227 ARAVRVNCISAGPLKSRAASAIGKAGDKTFID---LAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN  303 (319)
T ss_dssp             HHCCEEEEEEECCCC----------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred             ccCeeEEEEeeCCccChhhhhcccccchhhHH---HHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence             8999999999999999864321100000000   00011 123466778889999999999999988889999998888


Q ss_pred             cee
Q 017635          301 RWF  303 (368)
Q Consensus       301 ~~~  303 (368)
                      ++.
T Consensus       304 G~~  306 (319)
T 2ptg_A          304 GLH  306 (319)
T ss_dssp             TCT
T ss_pred             Cce
Confidence            874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=1.8e-37  Score=277.96  Aligned_cols=219  Identities=20%  Similarity=0.221  Sum_probs=176.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|+++|++|++++|+.+                                     +|+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------------------------~D~   44 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------------------------LDI   44 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------------------------CCT
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------------------------cCC
Confidence            4678999999999999999999999999999999998631                                     799


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++    |++|+||||||...+..++.+.+.++|++.+++|+.++++++++++|+|++   +|+||++||
T Consensus        45 ~~~~~v~~~~~~~----g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS  117 (223)
T 3uce_A           45 SDEKSVYHYFETI----GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSG  117 (223)
T ss_dssp             TCHHHHHHHHHHH----CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECC
T ss_pred             CCHHHHHHHHHHh----CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecc
Confidence            9999999988754    899999999998744678899999999999999999999999999999964   589999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|++||+++++|+++++.|+++  |+||+|+||+|+|++.............      .......+++
T Consensus       118 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~------~~~~~~~~~~  188 (223)
T 3uce_A          118 M-LSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMY------QRTQSHLPVG  188 (223)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHH------HHHHHHSTTC
T ss_pred             h-hhccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHH------HHHhhcCCCC
Confidence            7 57778889999999999999999999999987  9999999999999987543321111110      1122334455


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++..|+|++..+.|+++.  .+++|..+..||++
T Consensus       189 ~~~~~~dvA~~~~~l~~~--~~~tG~~i~vdgG~  220 (223)
T 3uce_A          189 KVGEASDIAMAYLFAIQN--SYMTGTVIDVDGGA  220 (223)
T ss_dssp             SCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTG
T ss_pred             CccCHHHHHHHHHHHccC--CCCCCcEEEecCCe
Confidence            666777777777776652  34556666666554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=4.4e-35  Score=272.15  Aligned_cols=220  Identities=20%  Similarity=0.276  Sum_probs=187.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||++|||+++|++|+++|++|++++|+.+++++..+++.+.                ...++.++.+|+
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   87 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL----------------GAASAHYIAGTM   87 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------TCSEEEEEECCT
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh----------------CCCceEEEeCCC
Confidence            4578999999999999999999999999999999999999988887777552                123788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEc-cCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINN-AGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~n-AG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +|.++++++++++.+++|++|+|||| ||...  .++.+.+.+++++.+++|+.|++.++++++|.|+++  .|+||++|
T Consensus        88 ~d~~~v~~~~~~~~~~~g~iD~li~naag~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~is  163 (286)
T 1xu9_A           88 EDMTFAEQFVAQAGKLMGGLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVS  163 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHTSCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCccCCC--CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEEC
Confidence            99999999999999999999999999 57653  345567899999999999999999999999999764  58999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      |. ++..+.++...|++||+++++|+++++.|+  .+.||+|++|+||+|+|++.......  .  ......+||++|+.
T Consensus       164 S~-~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~--~~~~~~~~~~vA~~  238 (286)
T 1xu9_A          164 SL-AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG--I--VHMQAAPKEECALE  238 (286)
T ss_dssp             EG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG--G--GGGGCBCHHHHHHH
T ss_pred             Cc-ccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc--c--ccCCCCCHHHHHHH
Confidence            97 567778889999999999999999999999  67899999999999999986432111  0  11223479999999


Q ss_pred             hhhhhhhc
Q 017635          266 LVPRIRVV  273 (368)
Q Consensus       266 ~~~~~~~~  273 (368)
                      ++..+...
T Consensus       239 i~~~~~~~  246 (286)
T 1xu9_A          239 IIKGGALR  246 (286)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhcC
Confidence            99877543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-36  Score=279.98  Aligned_cols=193  Identities=25%  Similarity=0.405  Sum_probs=173.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ..|++++|++|||||++|||++++++|+++|++|++++| +.+++++..+++++                 .+.++.++.
T Consensus        15 ~~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~-----------------~~~~~~~~~   77 (274)
T 1ja9_A           15 ASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-----------------LGAQGVAIQ   77 (274)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             CCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh-----------------cCCcEEEEE
Confidence            456789999999999999999999999999999999999 77777777777654                 245788899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|+++++++++++.++++++|+||||||... ..++.+.+.+++++.+++|+.++++++++++|.|+ +  +++||+
T Consensus        78 ~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~  153 (274)
T 1ja9_A           78 ADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIIL  153 (274)
T ss_dssp             CCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEE
T ss_pred             ecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEE
Confidence            9999999999999999999999999999999876 56778899999999999999999999999999997 3  389999


Q ss_pred             EcCCCCCC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          186 MDGAGSGG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       186 isS~~~~~-~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +||. ++. .+.+....|++||++++.++++++.|++++||++++++||++.|++..
T Consensus       154 ~sS~-~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~  209 (274)
T 1ja9_A          154 TSSI-AAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD  209 (274)
T ss_dssp             ECCG-GGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred             EcCh-HhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence            9987 344 667888999999999999999999999999999999999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.2e-37  Score=293.48  Aligned_cols=257  Identities=16%  Similarity=0.154  Sum_probs=191.9

Q ss_pred             cCCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHH------H-HHHHHHHHHhhhhhhhcCCCCcccccCc
Q 017635           29 CKAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESV------R-MTVTELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        29 ~~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~------~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      |++++|++|||||  ++|||+++|++|+++|++|++++|++...      . ...+++.+ ..     .+.      ...
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~-----~~~------~~~   72 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRK-LP-----DGS------LIE   72 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHB-CT-----TSC------BCC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhh-hh-----ccc------ccc
Confidence            5688999999999  89999999999999999999999874210      0 00111110 00     000      000


Q ss_pred             eeEEEe------------ccCCC--------HHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHh
Q 017635          100 KVAGIA------------CDVCE--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVST  158 (368)
Q Consensus       100 ~v~~~~------------~Dv~~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~v  158 (368)
                      .+.++.            +|++|        +++++++++++.+++|++|+||||||+.. ...++.+.+.++|++.+++
T Consensus        73 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~  152 (315)
T 2o2s_A           73 FAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSN  152 (315)
T ss_dssp             CSCEEECCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhh
Confidence            012233            34443        66899999999999999999999999753 2467788999999999999


Q ss_pred             hchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCccc
Q 017635          159 NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVL  236 (368)
Q Consensus       159 N~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~  236 (368)
                      |+.|+++++++++|+|++   +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+|+
T Consensus       153 N~~g~~~l~~~~~~~m~~---~g~Iv~isS~-~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  228 (315)
T 2o2s_A          153 SAYSFVSLLQHFGPIMNE---GGSAVTLSYL-AAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLK  228 (315)
T ss_dssp             HTHHHHHHHHHHSTTEEE---EEEEEEEEEG-GGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCC
T ss_pred             hhHHHHHHHHHHHHHHhc---CCEEEEEecc-cccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEeccccc
Confidence            999999999999999964   4899999987 566667776 58999999999999999999985 89999999999999


Q ss_pred             CcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          237 TDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       237 T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |++................  ........+++++..|++++..+.||+++...+++|..+..||++.
T Consensus       229 T~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          229 SRAASAIGKSGEKSFIDYA--IDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             CHHHHHTTCSSSSCHHHHH--HHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             chhhhhccccccchhHHHH--HHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence            9986432110000000000  0001123456778889999999999999988899999999999874

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1e-36  Score=276.81  Aligned_cols=216  Identities=19%  Similarity=0.249  Sum_probs=150.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++++|++|||||++|||+++|++|++ |++|++++|+.+++++..+                      ..++.++.+|+
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----------------------~~~~~~~~~D~   57 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----------------------IEGVEPIESDI   57 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----------------------STTEEEEECCH
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----------------------hcCCcceeccc
Confidence            467899999999999999999999988 9999999999887654432                      13477899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++.++ .+.+.+..++++++|+||||||+.. ..++.+.+.+++++.+++|+.|++++++.++|.|+++  +|+||++||
T Consensus        58 ~~~~~-~~~~~~~~~~~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS  133 (245)
T 3e9n_A           58 VKEVL-EEGGVDKLKNLDHVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAA--SGCVIYINS  133 (245)
T ss_dssp             HHHHH-TSSSCGGGTTCSCCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEC-
T ss_pred             chHHH-HHHHHHHHHhcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCeEEEEcC
Confidence            99877 4455555677899999999999976 5788889999999999999999999999999999875  489999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++...|++||+|+++|+++++.|++++||+||+|+||+|+|++...................|+++|+.++.
T Consensus       134 ~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~  212 (245)
T 3e9n_A          134 G-AGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRF  212 (245)
T ss_dssp             ----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------CCGGGSCHHHHHHHHHH
T ss_pred             c-ccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHH
Confidence            7 577788899999999999999999999999999999999999999999876533222221111223468888887776


Q ss_pred             hhhh
Q 017635          269 RIRV  272 (368)
Q Consensus       269 ~~~~  272 (368)
                      .+..
T Consensus       213 l~~~  216 (245)
T 3e9n_A          213 VIDA  216 (245)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            6543

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3e-36  Score=277.17  Aligned_cols=187  Identities=29%  Similarity=0.428  Sum_probs=164.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.++.+|++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~D~~   68 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---------------EPQKTLFIQCDVA   68 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---------------CGGGEEEEECCTT
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhc---------------CCCceEEEecCCC
Confidence            3678999999999999999999999999999999999988777666654311               1346888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~is  187 (368)
                      |+++++++++.+.+++|++|+||||||...         .++|++.+++|+.+++.+++.++|.|++++  +.++||++|
T Consensus        69 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is  139 (267)
T 2gdz_A           69 DQQQLRDTFRKVVDHFGRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS  139 (267)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence            999999999999999999999999999742         246899999999999999999999998652  268999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHH--HHHhCCCCeEEEEEecCcccCcccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASL--FKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~l--a~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      |. ++..+.+....|++||+++++|++++  +.|+++.||+||+|+||+|+|++..
T Consensus       140 S~-~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~  194 (267)
T 2gdz_A          140 SL-AGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILE  194 (267)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHH
T ss_pred             Cc-cccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhh
Confidence            87 56677788899999999999999995  6899999999999999999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.8e-37  Score=278.48  Aligned_cols=233  Identities=18%  Similarity=0.235  Sum_probs=183.4

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .....+++|++|||||++|||+++|++|+++|++|++++|+.+.++    +                    . ..+.++ 
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~--------------------~-~~~~~~-   65 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----R--------------------S-GHRYVV-   65 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----H--------------------T-CSEEEE-
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----h--------------------h-CCeEEE-
Confidence            3455789999999999999999999999999999999999973321    1                    1 145666 


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|+  .++++++++++    .++|+||||||... ..++.+.+.++|++.+++|+.|++++++.++|.|+++ +.++||+
T Consensus        66 ~D~--~~~~~~~~~~~----~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~  137 (249)
T 1o5i_A           66 CDL--RKDLDLLFEKV----KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVA  137 (249)
T ss_dssp             CCT--TTCHHHHHHHS----CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             eeH--HHHHHHHHHHh----cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            999  45677766654    37999999999876 5778889999999999999999999999999999877 4799999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.+....|++||+++++|+++++.|++++||+||+|+||+++|++..........         .......
T Consensus       138 isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---------~~~~~~~  207 (249)
T 1o5i_A          138 ITSF-SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK---------KQVESQI  207 (249)
T ss_dssp             ECCG-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH---------HHHHTTS
T ss_pred             Ecch-HhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHH---------HHHHhcC
Confidence            9987 56777888999999999999999999999999999999999999999986321110000         0001112


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++.++..++++++.+.||+++...+.+|..+..+|++
T Consensus       208 p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG~  244 (249)
T 1o5i_A          208 PMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGGL  244 (249)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            3455667777888888888877767777777777765

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-36  Score=272.89  Aligned_cols=239  Identities=21%  Similarity=0.282  Sum_probs=184.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+++++..+++                     ..+.++.+|+
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---------------------~~~~~~~~D~   61 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------------------PGIEPVCVDL   61 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---------------------cCCCcEEecC
Confidence            4578999999999999999999999999999999999987766544321                     1245579999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++    +++++|+||||||... ..++.+.+.+++++.+++|+.|++++++.++|.|.+++..++||++||
T Consensus        62 ~~~~~~~~~~~----~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS  136 (244)
T 1cyd_A           62 GDWDATEKALG----GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  136 (244)
T ss_dssp             TCHHHHHHHHT----TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHHH----HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcc
Confidence            99999988776    5689999999999876 577888999999999999999999999999999987633689999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . .+..+.+....|++||++++.++++++.|++++||++++++||++.|++.......  .....      ......++.
T Consensus       137 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~------~~~~~~~~~  207 (244)
T 1cyd_A          137 M-VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFAR------KLKERHPLR  207 (244)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHH------HHHHHSTTS
T ss_pred             h-hhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC--HHHHH------HHHhcCCcc
Confidence            7 56677788899999999999999999999999999999999999999975421100  00000      001112233


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +...++|+++.+.+++++...+.++..+..+|++
T Consensus       208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  241 (244)
T 1cyd_A          208 KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY  241 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTG
T ss_pred             CCCCHHHHHHHHHHHhCchhhcccCCEEEECCCc
Confidence            4445566666666666655444445555555443

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.8e-35  Score=269.95  Aligned_cols=187  Identities=23%  Similarity=0.342  Sum_probs=161.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |++++|+++||||++|||+++|++|+++|++ |++++|+.+.  +..+++.+..               .+.++.++.+|
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~---------------~~~~~~~~~~D   63 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAIN---------------PKVNITFHTYD   63 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHC---------------TTSEEEEEECC
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhC---------------CCceEEEEEEe
Confidence            4678999999999999999999999999996 9999998642  2233443321               13578899999


Q ss_pred             CCCH-HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEE
Q 017635          108 VCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIF  184 (368)
Q Consensus       108 v~~~-~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv  184 (368)
                      ++|+ ++++++++++.++++++|+||||||+.         +.+++++.+++|+.|+++++++++|.|.+++  ..|+||
T Consensus        64 ~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv  134 (254)
T 1sby_A           64 VTVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIA  134 (254)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEE
T ss_pred             cCCChHHHHHHHHHHHHhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEE
Confidence            9998 999999999999999999999999974         2356899999999999999999999997652  268999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ++||. ++..+.+....|++||+++++|+++++.+++++||+|++|+||+|+|++...
T Consensus       135 ~isS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          135 NICSV-TGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             EECCG-GGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             EECch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence            99987 5677788889999999999999999999998889999999999999998653

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=4.4e-37  Score=278.61  Aligned_cols=180  Identities=14%  Similarity=0.100  Sum_probs=161.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +.++|++|||||++|||+++|++|+++|++|++++|+.++.+                           ....++.+|++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~D~~   56 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------------------------SASVIVKMTDS   56 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------------------------SEEEECCCCSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------------------------CCcEEEEcCCC
Confidence            356899999999999999999999999999999999875421                           23567899999


Q ss_pred             CHHHHHHHHHHHHhHc--CCCCEEEEccCCCCCCCCC-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          110 EPADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |+++++++++++.+++  |++|+||||||+.. ..++ .+.+.+++++.+++|+.+++.++++++|+|++   +|+||++
T Consensus        57 ~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~i  132 (241)
T 1dhr_A           57 FTEQADQVTAEVGKLLGDQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLA  132 (241)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEE
Confidence            9999999999999999  79999999999876 4666 78889999999999999999999999999964   4899999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccc
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~  241 (368)
                      ||. ++..+.++...|++||+++++|+++++.|++  ++||+||+|+||+|+|++..
T Consensus       133 sS~-~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~  188 (241)
T 1dhr_A          133 GAK-AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR  188 (241)
T ss_dssp             CCG-GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH
T ss_pred             CCH-HHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcccc
Confidence            987 5667788899999999999999999999999  89999999999999999864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1e-35  Score=281.74  Aligned_cols=195  Identities=19%  Similarity=0.236  Sum_probs=162.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|++|||||++|||+++|++|+++|++|++++|+..++++..+.++.....           ...+.++.++.+|++|.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~Dv~d~   69 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARAL-----------ACPPGSLETLQLDVRDS   69 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHT-----------TCCTTSEEEEECCTTCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhc-----------cCCCCceEEEEecCCCH
Confidence            4689999999999999999999999999998887755544333333221000           00235688999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++  .+|++|+||||||+.. ..++.+.+.+++++++++|+.|+++++++++|+|+++ +.|+||++||. +
T Consensus        70 ~~v~~~~~~~--~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS~-~  144 (327)
T 1jtv_A           70 KSVAAARERV--TEGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSV-G  144 (327)
T ss_dssp             HHHHHHHHTC--TTSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG-G
T ss_pred             HHHHHHHHHH--hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCc-c
Confidence            9999999887  3589999999999876 5778889999999999999999999999999999876 57999999997 5


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      +..+.+....|++||+++++|+++++.|++++||+||+|+||+|+|++...
T Consensus       145 ~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~  195 (327)
T 1jtv_A          145 GLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (327)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             cccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence            677788899999999999999999999999999999999999999998754

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=4e-37  Score=287.44  Aligned_cols=258  Identities=17%  Similarity=0.145  Sum_probs=188.9

Q ss_pred             cCCCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      |++++|++|||||+  +|||+++|++|+++|++|++++|+..... ..........+.......    .........+.+
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~   78 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNI-FETSLRRGKFDQSRVLPD----GSLMEIKKVYPL   78 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHH-HHHHHHTTTTTGGGBCTT----SSBCCEEEEEEE
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchh-hhhhhhhhHhhhhhhhcc----cccccccccccc
Confidence            56889999999999  99999999999999999999998642210 000000000000000000    000001222333


Q ss_pred             --------cCC----C--------HHHHHHHHHHHHhHcCCCCEEEEccCCCC-CCCCCCCCCHHHHHHHHHhhchHHHH
Q 017635          107 --------DVC----E--------PADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEIEQIVSTNLVGSIL  165 (368)
Q Consensus       107 --------Dv~----~--------~~~v~~~~~~i~~~~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~  165 (368)
                              |++    |        +++++++++++.+++|++|+||||||+.. ...++.+.+.++|++.+++|+.|+++
T Consensus        79 ~~~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~  158 (297)
T 1d7o_A           79 DAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVS  158 (297)
T ss_dssp             CTTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred             ceeccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHH
Confidence                    233    2        66899999999999999999999999743 24677889999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccC
Q 017635          166 CTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT-AVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSG  243 (368)
Q Consensus       166 l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~-~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~  243 (368)
                      ++++++|+|++   +|+||++||. ++..+.++. ..|++||+|+++|+++|+.|+++ +||+||+|+||+|+|++....
T Consensus       159 l~~~~~~~m~~---~g~iv~isS~-~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~  234 (297)
T 1d7o_A          159 LLSHFLPIMNP---GGASISLTYI-ASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI  234 (297)
T ss_dssp             HHHHHGGGEEE---EEEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred             HHHHHHHHhcc---CceEEEEecc-ccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhc
Confidence            99999999964   4899999987 566677777 69999999999999999999985 899999999999999986432


Q ss_pred             cccchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          244 STIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       244 ~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..  .....      .......+++++..|++++..+.||+++...+++|..+..+|++.
T Consensus       235 ~~--~~~~~------~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          235 GF--IDTMI------EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             SH--HHHHH------HHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred             cc--cHHHH------HHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence            10  01110      011123355667788899999999999888788888888888764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=8.1e-36  Score=288.76  Aligned_cols=267  Identities=13%  Similarity=0.102  Sum_probs=199.9

Q ss_pred             CCCCeEEEEcCCChHHHH--HHHHHHHCCCeEEEEeCChHHH------------HHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           31 AGPRNVVITGSTRGLGKA--LAREFLLSGDRVVVASRSSESV------------RMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~a--ia~~la~~G~~Vil~~R~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      ..+|++|||||++|||++  +|+.|+++|++|++++|+....            +.+.+.+++                 
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  120 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKK-----------------  120 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHH-----------------
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHH-----------------
Confidence            679999999999999999  9999999999999999975432            222222222                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCC------------CCCCC--------------------
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK------------GFKPL--------------------  144 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~------------~~~~~--------------------  144 (368)
                      .+.++..+.||++|.++++++++++.+++|+||+||||||...            ...++                    
T Consensus       121 ~g~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~  200 (418)
T 4eue_A          121 KGLVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKK  200 (418)
T ss_dssp             TTCCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEE
T ss_pred             cCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccccccc
Confidence            3467889999999999999999999999999999999999841            12333                    


Q ss_pred             -CCCCHHHHHHHHHhhchHHH-HHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCc--hhhHHHHHHHHHHHHHHHHHh
Q 017635          145 -LQFTNEEIEQIVSTNLVGSI-LCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLT--AVYGSTKCGLRQLQASLFKES  220 (368)
Q Consensus       145 -~~~~~~~~~~~~~vN~~g~~-~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~--~~Y~aSKaal~~l~~~la~e~  220 (368)
                       .+.+.++|++.+++|..+.+ .+++.+++.+... ++|+||++||. ++..+.|.+  ++|++||+|+++|+++|+.|+
T Consensus       201 ~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~-~gg~IV~iSSi-~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~EL  278 (418)
T 4eue_A          201 VSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFS-DKATTIAYSYI-GSPRTYKIYREGTIGIAKKDLEDKAKLINEKL  278 (418)
T ss_dssp             ECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE-EEEEEEEEECC-CCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhc-CCcEEEEEeCc-hhcCCCCccccHHHHHHHHHHHHHHHHHHHHh
Confidence             45799999999999999998 7788877655443 46899999998 566677777  999999999999999999999


Q ss_pred             CC-CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcC
Q 017635          221 KR-SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRR  299 (368)
Q Consensus       221 ~~-~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  299 (368)
                      ++ +|||||+|+||+|+|++....... .         .-......++++.+.+++++..+.||.++..  .++..+..|
T Consensus       279 a~~~GIrVN~V~PG~v~T~~s~~ip~~-p---------~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~~--~~g~~~~~D  346 (418)
T 4eue_A          279 NRVIGGRAFVSVNKALVTKASAYIPTF-P---------LYAAILYKVMKEKNIHENCIMQIERMFSEKI--YSNEKIQFD  346 (418)
T ss_dssp             HHHHSCEEEEEECCCCCCHHHHTSTTH-H---------HHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT--SSSSCCCCC
T ss_pred             CCccCeEEEEEECCcCcChhhhcCCCC-c---------HHHHHHHHHHhhcCChHHHHHHHHHHhhccc--cCCCccccC
Confidence            99 999999999999999986432210 0         0112233467888899999999999998743  234333344


Q ss_pred             C-ceecCCCccccchhhhhhhh-hhccccCc
Q 017635          300 G-RWFDDQGRALYAAEADRIRN-WAENRARF  328 (368)
Q Consensus       300 g-~~~~~~~~~~~~~~~~~l~~-w~~~~~~~  328 (368)
                      + +........+.+...+++.+ |.+...+.
T Consensus       347 ~~~~~r~d~~e~~~~~q~~~~~~~~~~~~~~  377 (418)
T 4eue_A          347 DKGRLRMDDLELRKDVQDEVDRIWSNITPEN  377 (418)
T ss_dssp             TTSCEESCTTTTCHHHHHHHHHHHHHCCTTT
T ss_pred             CCceeeCChhhcCHHHHHHHHHHHHHhcccc
Confidence            3 22222333444444444443 66554433

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.8e-36  Score=309.06  Aligned_cols=234  Identities=23%  Similarity=0.278  Sum_probs=180.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC---------ChHHHHHHHHHHHHHhhhhhhhcCCCCccccc
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASR---------SSESVRMTVTELEENLKEGMMAAGGSSKKNLV   97 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~   97 (368)
                      ..++++||++|||||++|||+++|++|+++|++|++++|         +.++++++.+++++.                 
T Consensus        13 ~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~-----------------   75 (613)
T 3oml_A           13 GKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA-----------------   75 (613)
T ss_dssp             --CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT-----------------
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh-----------------
Confidence            456889999999999999999999999999999999988         667777777777652                 


Q ss_pred             CceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635           98 HAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus        98 ~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                      +..   ..+|++|.++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++++++|+|+++
T Consensus        76 ~~~---~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~  151 (613)
T 3oml_A           76 GGE---AVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ  151 (613)
T ss_dssp             TCC---EEECCCCGGGHHHHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCe---EEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            222   247999999999999999999999999999999987 5788899999999999999999999999999999987


Q ss_pred             CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC
Q 017635          178 PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  257 (368)
Q Consensus       178 ~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  257 (368)
                       +.|+||++||. ++..+.++...|++||+|+++|+++|+.|++++||+||+|+||.+ |++......            
T Consensus       152 -~~g~IV~isS~-a~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~------------  216 (613)
T 3oml_A          152 -NYGRIIMTSSN-SGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP------------  216 (613)
T ss_dssp             -TCEEEEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC------------
T ss_pred             -CCCEEEEECCH-HHcCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc------------
Confidence             57999999987 566778889999999999999999999999999999999999975 665432211            


Q ss_pred             CHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          258 LPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       258 ~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                        +.     +.+...|++++..+.||+++. .+++|..+..+|+|..
T Consensus       217 --~~-----~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          217 --DI-----LFNELKPKLIAPVVAYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             --HH-----HHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             --hh-----hhhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCCeEE
Confidence              11     111236778888888999888 7788888888887743

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-35  Score=265.73  Aligned_cols=203  Identities=15%  Similarity=0.111  Sum_probs=171.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|++|||||++|||+++|++|+++|++|++++|+.++.+                           ....++.+|++|+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~~~~~~~~D~~~~   54 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------------------------DSNILVDGNKNWT   54 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------------------------SEEEECCTTSCHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------------------------cccEEEeCCCCCH
Confidence            5789999999999999999999999999999999876421                           2356789999999


Q ss_pred             HHHHHHHHHHHhHc--CCCCEEEEccCCCCCCCCC-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          112 ADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       112 ~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++++++++++.+++  +++|+||||||+.. ..++ .+.+.+++++.+++|+.+++++++.++|+|++   +|+||++||
T Consensus        55 ~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS  130 (236)
T 1ooe_A           55 EQEQSILEQTASSLQGSQVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGA  130 (236)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECC
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECc
Confidence            99999999999999  79999999999876 4666 77889999999999999999999999999964   489999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      . ++..+.++...|++||+++++|+++++.|++  ++||+||+|+||+|+|++.......  ....  ...+|+++|+.+
T Consensus       131 ~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~--~~~~~~dvA~~i  205 (236)
T 1ooe_A          131 A-AAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN--ADHS--SWTPLSFISEHL  205 (236)
T ss_dssp             G-GGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT--CCGG--GCBCHHHHHHHH
T ss_pred             h-hhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC--cccc--ccCCHHHHHHHH
Confidence            7 5667788899999999999999999999998  8999999999999999986432111  0111  112577777766


Q ss_pred             hhhh
Q 017635          267 VPRI  270 (368)
Q Consensus       267 ~~~~  270 (368)
                      +..+
T Consensus       206 ~~~l  209 (236)
T 1ooe_A          206 LKWT  209 (236)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3e-34  Score=260.19  Aligned_cols=209  Identities=18%  Similarity=0.262  Sum_probs=170.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++|++|||||++|||++++++|+++|  ++|++++|+.++++++. ++                   .+.++.++.+|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~-------------------~~~~~~~~~~D~~   61 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI-------------------KDSRVHVLPLTVT   61 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC-------------------CCTTEEEEECCTT
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc-------------------cCCceEEEEeecC
Confidence            57999999999999999999999999  99999999987764331 11                   1346889999999


Q ss_pred             CHHHHHHHHHHHHhHcC--CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC------CC--
Q 017635          110 EPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ------PK--  179 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~------~~--  179 (368)
                      |.++++++++++.+++|  ++|+||||||...+..++.+.+.+++++.+++|+.++++++++++|.|+++      ++  
T Consensus        62 ~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~  141 (250)
T 1yo6_A           62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS  141 (250)
T ss_dssp             CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCC
T ss_pred             CHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCccc
Confidence            99999999999999998  999999999987535678889999999999999999999999999999764      21  


Q ss_pred             --CcEEEEEcCCCCCCCCC-------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhh
Q 017635          180 --GGHIFNMDGAGSGGSST-------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ  250 (368)
Q Consensus       180 --~g~Iv~isS~~~~~~~~-------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~  250 (368)
                        .++||++||.. +..+.       ++...|++||+++++|+++++.|++++||+|++|+||+|+|++....       
T Consensus       142 ~~~~~iv~isS~~-~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------  213 (250)
T 1yo6_A          142 VSRAAVITISSGL-GSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------  213 (250)
T ss_dssp             TTTCEEEEECCGG-GCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------
T ss_pred             CCCcEEEEeccCc-cccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCCC-------
Confidence              68999999873 44443       56789999999999999999999999999999999999999986421       


Q ss_pred             hhhhhcCCHHHHHHHhhhhhhh
Q 017635          251 MFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       251 ~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                          ...+|+++|+.++..+..
T Consensus       214 ----~~~~~~~~a~~~~~~~~~  231 (250)
T 1yo6_A          214 ----AALTVEQSTAELISSFNK  231 (250)
T ss_dssp             ---------HHHHHHHHHHHTT
T ss_pred             ----CCCCHHHHHHHHHHHHhc
Confidence                113689999988876643

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-34  Score=262.63  Aligned_cols=217  Identities=20%  Similarity=0.217  Sum_probs=179.6

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G---~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      ....++++|++|||||++|||+++|++|+++|   ++|++++|+.++.+.+ +++.+                 .+.++.
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~-----------------~~~~~~   75 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAK-----------------NHSNIH   75 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHH-----------------HCTTEE
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhc-----------------cCCceE
Confidence            34557889999999999999999999999999   9999999998766533 34433                 134688


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcC--CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC---
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFG--SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ---  177 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g--~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~---  177 (368)
                      ++.+|++|.++++++++++.++++  ++|+||||||+..+..++.+.+.+++++.+++|+.+++++++.++|.|+++   
T Consensus        76 ~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~  155 (267)
T 1sny_A           76 ILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKA  155 (267)
T ss_dssp             EEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccc
Confidence            999999999999999999999998  899999999987534677888999999999999999999999999999864   


Q ss_pred             ---CC----CcEEEEEcCCCCCCCCC---CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc
Q 017635          178 ---PK----GGHIFNMDGAGSGGSST---PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ  247 (368)
Q Consensus       178 ---~~----~g~Iv~isS~~~~~~~~---~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~  247 (368)
                         +.    .++||++||.. +..+.   +....|++||+++++|+++++.|++++||+|++|+||+|+|++....    
T Consensus       156 ~~~~~~~~~~~~iv~isS~~-~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----  230 (267)
T 1sny_A          156 NESQPMGVGRAAIINMSSIL-GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS----  230 (267)
T ss_dssp             TTTSCSSTTTCEEEEECCGG-GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT----
T ss_pred             cccccccCCCceEEEEeccc-ccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC----
Confidence               21    58999999873 43333   36778999999999999999999999999999999999999986421    


Q ss_pred             hhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          248 NKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       248 ~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                             ...+|+++|+.++..+..
T Consensus       231 -------~~~~~~~~a~~~~~~~~~  248 (267)
T 1sny_A          231 -------APLDVPTSTGQIVQTISK  248 (267)
T ss_dssp             -------CSBCHHHHHHHHHHHHHH
T ss_pred             -------CCCCHHHHHHHHHHHHHh
Confidence                   123799999998877653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=9.8e-35  Score=264.85  Aligned_cols=205  Identities=12%  Similarity=0.100  Sum_probs=171.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +..+|++|||||++|||+++|++|+++|++|++++|+.++.+                             ...+.+|++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------------------------~~~~~~d~~   69 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------------------------DHSFTIKDS   69 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------------------------SEEEECSCS
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------------------ccceEEEeC
Confidence            444799999999999999999999999999999999876421                             134789999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+++|++|+||||||+.....++.+.+.+++++.+++|+.|+++++++++|.|++   +|+||++||.
T Consensus        70 d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~  146 (251)
T 3orf_A           70 GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGAS  146 (251)
T ss_dssp             SHHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEech
Confidence            9999999999999999999999999998763334778889999999999999999999999999964   4899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                       ++..+.++...|++||+|+++|+++++.|++  ++||+||+|+||+|+|++........  ....  ..+|+++|+.++
T Consensus       147 -~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~--~~~~~dva~~i~  221 (251)
T 3orf_A          147 -AALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDA--NFDD--WTPLSEVAEKLF  221 (251)
T ss_dssp             -GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTTS--CGGG--SBCHHHHHHHHH
T ss_pred             -hhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcccc--cccc--cCCHHHHHHHHH
Confidence             5777888999999999999999999999987  89999999999999999864322111  1111  125777777776


Q ss_pred             hhhh
Q 017635          268 PRIR  271 (368)
Q Consensus       268 ~~~~  271 (368)
                      ..+.
T Consensus       222 ~l~~  225 (251)
T 3orf_A          222 EWST  225 (251)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            5553

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=3.5e-33  Score=256.59  Aligned_cols=207  Identities=23%  Similarity=0.307  Sum_probs=173.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~-~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .++|++|||||++|||+++|++|++ +|++|++++|+.++.++..+++.+                 .+.++.++.+|++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dl~   64 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-----------------EGLSPRFHQLDID   64 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-----------------TTCCCEEEECCTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh-----------------cCCeeEEEECCCC
Confidence            4689999999999999999999999 999999999999888888777765                 2356888999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCC-HHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT-NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~-~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |.++++++++++.++++++|+||||||... ... .+.+ .+++++.+++|+.|++++++.++|.|++   .++||++||
T Consensus        65 ~~~~~~~~~~~~~~~~g~id~li~~Ag~~~-~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS  139 (276)
T 1wma_A           65 DLQSIRALRDFLRKEYGGLDVLVNNAGIAF-KVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSS  139 (276)
T ss_dssp             CHHHHHHHHHHHHHHHSSEEEEEECCCCCC-CTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEECCcccc-cCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECC
Confidence            999999999999999999999999999865 222 3344 5899999999999999999999999864   479999998


Q ss_pred             CCCCC-----------------------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCC----C
Q 017635          189 AGSGG-----------------------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKR----S  223 (368)
Q Consensus       189 ~~~~~-----------------------------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~----~  223 (368)
                      ..+..                                         .+.|. ..|++||++++.|++.++.++++    .
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~~~~~~~~~~  218 (276)
T 1wma_A          140 IMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS-SAYGVTKIGVTVLSRIHARKLSEQRKGD  218 (276)
T ss_dssp             HHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCS-CHHHHHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred             hhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCcc-chhHHHHHHHHHHHHHHHHHhhcccCCC
Confidence            63210                                         01122 78999999999999999999987    7


Q ss_pred             CeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhh
Q 017635          224 KVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       224 gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      ||+|++|+||+|+|++....           ...+|+++|+.++..+.
T Consensus       219 ~i~v~~v~PG~v~t~~~~~~-----------~~~~~~~~a~~~~~l~~  255 (276)
T 1wma_A          219 KILLNACCPGWVRTDMAGPK-----------ATKSPEEGAETPVYLAL  255 (276)
T ss_dssp             CCEEEEEECCSBCSTTTCTT-----------CSBCHHHHTHHHHHHHS
T ss_pred             ceEEEEecCCccccCcCCcc-----------ccCChhHhhhhHhhhhc
Confidence            99999999999999986431           12368888888876654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=9.8e-33  Score=249.26  Aligned_cols=178  Identities=27%  Similarity=0.326  Sum_probs=156.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .                            .++.++.+|++|++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------------------------~~~~~~~~D~~~~~   52 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------------------------EDLIYVEGDVTREE   52 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------------------------SSSEEEECCTTCHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------------------------cceEEEeCCCCCHH
Confidence            689999999999999999999999999999999864 1                            13477899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCC----CHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-----CCcEE
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQF----TNEEIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHI  183 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~----~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-----~~g~I  183 (368)
                      +++++++++ ++++++|++|||||... ..++.+.    +.+++++.+++|+.+++++++.++|.|++++     +.++|
T Consensus        53 ~~~~~~~~~-~~~~~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~i  130 (242)
T 1uay_A           53 DVRRAVARA-QEEAPLFAVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVI  130 (242)
T ss_dssp             HHHHHHHHH-HHHSCEEEEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEE
T ss_pred             HHHHHHHHH-HhhCCceEEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Confidence            999999999 88899999999999876 3555444    4459999999999999999999999998753     13599


Q ss_pred             EEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          184 FNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       184 v~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      |++||. .+..+.+....|++||++++.++++++.|++++||+|++|+||+|.|++...
T Consensus       131 v~~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~  188 (242)
T 1uay_A          131 VNTASV-AAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG  188 (242)
T ss_dssp             EEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT
T ss_pred             EEeCCh-hhccCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc
Confidence            999987 4556677889999999999999999999999999999999999999998654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1.1e-34  Score=264.80  Aligned_cols=219  Identities=16%  Similarity=0.150  Sum_probs=161.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |++|||||++|||+++|++|+++|++|++++|+.++++                           .  . +++|++|.++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------------------------~--~-~~~Dl~~~~~   51 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI---------------------------A--D-LSTAEGRKQA   51 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------------------C--C-TTSHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc---------------------------c--c-cccCCCCHHH
Confidence            78999999999999999999999999999999865421                           0  1 6789999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++   ++++|+||||||+....        +.+++.+++|+.|+++++++++|+|+++ +.++||++||..+..
T Consensus        52 v~~~~~~~---~~~id~lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~  119 (257)
T 1fjh_A           52 IADVLAKC---SKGMDGLVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVASAH  119 (257)
T ss_dssp             HHHHHTTC---TTCCSEEEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGGS
T ss_pred             HHHHHHHh---CCCCCEEEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhc-CCcEEEEECChhhhc
Confidence            98887632   38999999999975411        1289999999999999999999999877 579999999974321


Q ss_pred             ---------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccC-cc
Q 017635          194 ---------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSG-ST  245 (368)
Q Consensus       194 ---------------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~-~~  245 (368)
                                                 .+.+....|++||++++.|+++++.|++++||+||+|+||+|+|++.... ..
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  199 (257)
T 1fjh_A          120 LAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD  199 (257)
T ss_dssp             SCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------
T ss_pred             cccccchhhhhhcccchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc
Confidence                                       34456789999999999999999999999999999999999999986532 11


Q ss_pred             cchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          246 IQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       246 ~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .........       . ..++++...+++++..+.|++++...+++|..+..+|++
T Consensus       200 ~~~~~~~~~-------~-~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          200 PRYGESIAK-------F-VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             ----------------C-CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             hhHHHHHHh-------c-ccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            000000000       0 123345566777777777888777666666666666654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.3e-32  Score=300.96  Aligned_cols=245  Identities=21%  Similarity=0.245  Sum_probs=197.5

Q ss_pred             cccCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           27 EHCKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~G-IG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      ..|++++|++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+.+..             .+.++.++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~-------------~g~~v~~v  735 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-------------KGSTLIVV  735 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-------------TTCEEEEE
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhc-------------CCCeEEEE
Confidence            446789999999999998 9999999999999999998 68888888877777554321             24678999


Q ss_pred             eccCCCHHHHHHHHHHHHhH-----cC-CCCEEEEccCCCCCCC-CCCCCC--HHHHHHHHHhhchHHHHHHHHH--HHH
Q 017635          105 ACDVCEPADVQKLSNFAVNE-----FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTREA--MRV  173 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~-----~g-~iD~li~nAG~~~~~~-~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--lp~  173 (368)
                      .||++|.++++++++++.++     +| +||+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  +|.
T Consensus       736 ~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~  814 (1887)
T 2uv8_A          736 PFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARG  814 (1887)
T ss_dssp             ECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred             EecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999988     66 9999999999876 45 788888  8999999999999999999988  788


Q ss_pred             HHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-CcccccCcccchhhh
Q 017635          174 MRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-QASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQM  251 (368)
Q Consensus       174 m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l-~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~  251 (368)
                      |+++ ++|+||++||. ++..+  +...|++||+|+++| ++.++.+++++ |+||+|+||+|+ |+|..... .     
T Consensus       815 m~~~-~~G~IVnISS~-ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~-~-----  883 (1887)
T 2uv8_A          815 IETR-PAQVILPMSPN-HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANN-I-----  883 (1887)
T ss_dssp             CCSC-CEEEEEEECSC-TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CC-T-----
T ss_pred             hhhC-CCCEEEEEcCh-HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccch-h-----
Confidence            8766 46899999987 44444  678999999999999 89999999988 999999999999 88864311 0     


Q ss_pred             hhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHH-HHHHHhhhhhcC--Ccee
Q 017635          252 FNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRR--GRWF  303 (368)
Q Consensus       252 ~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~--g~~~  303 (368)
                            ..+...+.++ +...|++++..+.||+++. ..++++..+..+  |++.
T Consensus       884 ------~~~~~~~~pl-r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~  931 (1887)
T 2uv8_A          884 ------IAEGIEKMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ  931 (1887)
T ss_dssp             ------THHHHHTTSC-CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTT
T ss_pred             ------HHHHHHhcCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCee
Confidence                  0111111222 3446788888889999998 788999988764  7653

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.98  E-value=1.4e-31  Score=267.85  Aligned_cols=218  Identities=13%  Similarity=0.130  Sum_probs=178.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEE-eCCh-------------HHHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVA-SRSS-------------ESVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~-~R~~-------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      ++|++|||||++|||+++|++|+++|++ |+++ +|+.             ++++++.+++++                 
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------  312 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD-----------------  312 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH-----------------
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh-----------------
Confidence            5799999999999999999999999987 7777 8983             455666666655                 


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++.||++|.++++++++++. ++++||+||||||+.. ..++.+.+.+++++++++|+.|++++.+.+.|.|++
T Consensus       313 ~g~~v~~~~~Dvtd~~~v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~  390 (525)
T 3qp9_A          313 LGATATVVTCDLTDAEAAARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAA  390 (525)
T ss_dssp             HTCEEEEEECCTTSHHHHHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred             cCCEEEEEECCCCCHHHHHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence            35689999999999999999999988 7899999999999987 688999999999999999999999999999999987


Q ss_pred             CCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhc
Q 017635          177 QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC  256 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~  256 (368)
                      ++..++||++||. ++..+.+++..|+++|+++++|+    +++.++||++++|+||+++|+|.................
T Consensus       391 ~~~~~~iV~~SS~-a~~~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~  465 (525)
T 3qp9_A          391 GGRPPVLVLFSSV-AAIWGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRP  465 (525)
T ss_dssp             --CCCEEEEEEEG-GGTTCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCC
T ss_pred             CCCCCEEEEECCH-HHcCCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccchhhHHHHHhcCCCC
Confidence            6337899999998 67888999999999999998874    567788999999999999999974322111111122333


Q ss_pred             CCHHHHHHHhhhhhhhc
Q 017635          257 ELPETVARTLVPRIRVV  273 (368)
Q Consensus       257 ~~pe~~a~~~~~~~~~~  273 (368)
                      .+|+++++.+...+...
T Consensus       466 l~pee~a~~l~~~l~~~  482 (525)
T 3qp9_A          466 LAPATALTALDTALGHG  482 (525)
T ss_dssp             BCHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHHHhCC
Confidence            58999999888777644

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=1.5e-31  Score=292.01  Aligned_cols=245  Identities=18%  Similarity=0.201  Sum_probs=194.6

Q ss_pred             cccCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           27 EHCKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~G-IG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      ..|++++|++|||||++| ||+++|++|+++|++|++++ |+.+++++..+++.+.+..             .+.++.++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~-------------~G~~v~~v  712 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGA-------------RGSQLVVV  712 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCC-------------TTCEEEEE
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhc-------------cCCeEEEE
Confidence            345789999999999999 99999999999999999985 7777777777777554321             24678999


Q ss_pred             eccCCCHHHHHHHHHHHHhH---cC-CCCEEEEccCCCCCCC-CCCCCC--HHHHHHHHHhhchHHHHHHHH--HHHHHH
Q 017635          105 ACDVCEPADVQKLSNFAVNE---FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTRE--AMRVMR  175 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~---~g-~iD~li~nAG~~~~~~-~~~~~~--~~~~~~~~~vN~~g~~~l~~~--~lp~m~  175 (368)
                      .||++|.++++++++++.++   +| +||+||||||+.. .. ++.+.+  .++|++++++|+.|++.+++.  ++|.|.
T Consensus       713 ~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~  791 (1878)
T 2uv9_A          713 PFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYE  791 (1878)
T ss_dssp             ECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC
T ss_pred             EcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence            99999999999999999998   99 9999999999876 45 788888  899999999999999999987  778887


Q ss_pred             cCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHH-HhCCCCeEEEEEecCccc-CcccccCcccchhhhhh
Q 017635          176 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFK-ESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQMFN  253 (368)
Q Consensus       176 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~-e~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~~~~  253 (368)
                      ++ +.|+||++||. ++..+  +...|++||+|+++|++.++. ++++. |+||+|+||+++ |+|....     ..   
T Consensus       792 ~~-~~G~IVnISS~-ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~-----~~---  858 (1878)
T 2uv9_A          792 TR-PAQVILPLSPN-HGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN-----NL---  858 (1878)
T ss_dssp             SC-CEEECCEECSC-SSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH-----HH---
T ss_pred             hC-CCCEEEEEcch-hhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc-----hh---
Confidence            66 46899999987 44444  467999999999999887655 57776 999999999999 9986421     00   


Q ss_pred             hhcCCHHHHHHHhhhhhhhcccccceeeeccCHHH-HHHHhhhhhc--CCcee
Q 017635          254 IICELPETVARTLVPRIRVVKGSGKAINYLTPPRI-LLALVTAWLR--RGRWF  303 (368)
Q Consensus       254 ~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~--~g~~~  303 (368)
                          ..+...+..+ +...+++++..+.||+++.. .++++..+..  ||++.
T Consensus       859 ----~~~~~~~~pl-r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~  906 (1878)
T 2uv9_A          859 ----VAEGVEKLGV-RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQ  906 (1878)
T ss_dssp             ----THHHHHTTTC-CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGG
T ss_pred             ----hHHHHHhcCC-CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCcc
Confidence                0111111112 33366777777888888887 7888888775  36654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=6.6e-33  Score=294.21  Aligned_cols=246  Identities=20%  Similarity=0.221  Sum_probs=197.2

Q ss_pred             ccccCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           26 EEHCKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~G-IG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      ...|++++|++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++.+....             .+.++.+
T Consensus       469 ~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a-------------~Ga~V~v  535 (1688)
T 2pff_A          469 XXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGA-------------KGSTLIV  535 (1688)
T ss_dssp             SSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCC-------------TTCEEEE
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhc-------------CCCeEEE
Confidence            3456789999999999998 9999999999999999998 67777766666665332110             2457899


Q ss_pred             EeccCCCHHHHHHHHHHHHhH-----cC-CCCEEEEccCCCCCCC-CCCCCC--HHHHHHHHHhhchHHHHHHHHH--HH
Q 017635          104 IACDVCEPADVQKLSNFAVNE-----FG-SIDIWINNAGTNKGFK-PLLQFT--NEEIEQIVSTNLVGSILCTREA--MR  172 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~-----~g-~iD~li~nAG~~~~~~-~~~~~~--~~~~~~~~~vN~~g~~~l~~~~--lp  172 (368)
                      ++||++|.++++++++++.++     +| +||+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.+  +|
T Consensus       536 V~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp  614 (1688)
T 2pff_A          536 VPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSAR  614 (1688)
T ss_dssp             EECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhCh
Confidence            999999999999999999988     77 9999999999876 45 788888  9999999999999999999998  88


Q ss_pred             HHHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHH-HHHHHHHhCCCCeEEEEEecCccc-CcccccCcccchhh
Q 017635          173 VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL-QASLFKESKRSKVGVHTASPGMVL-TDLLLSGSTIQNKQ  250 (368)
Q Consensus       173 ~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l-~~~la~e~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~~  250 (368)
                      .|+++ ++|+||++||. ++..+  +...|++||+|+++| ++.++.++++. |+||+|+||+|+ |+|...... ..  
T Consensus       615 ~M~kr-ggGrIVnISSi-AG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~-~~--  686 (1688)
T 2pff_A          615 GIETR-PAQVILPMSPN-HGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI-IA--  686 (1688)
T ss_dssp             TCTTS-CEEECCCCCSC-TTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTT-CS--
T ss_pred             HHHhC-CCCEEEEEECh-HhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchH-HH--
Confidence            88776 46899999987 44444  678999999999999 78888888887 999999999999 787643110 00  


Q ss_pred             hhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHH-HHHHHhhhhhcC--Ccee
Q 017635          251 MFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRR--GRWF  303 (368)
Q Consensus       251 ~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~--g~~~  303 (368)
                        ....       +.++ +...|++++..+.||+++. ..++++..+..+  |++.
T Consensus       687 --~~l~-------~ipl-R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~  732 (1688)
T 2pff_A          687 --EGIE-------KMGV-RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQ  732 (1688)
T ss_dssp             --TTTS-------SSSC-CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGG
T ss_pred             --HHHH-------hCCC-CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCee
Confidence              0000       1111 3347889999999999988 678888888764  7664

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1e-30  Score=230.61  Aligned_cols=199  Identities=21%  Similarity=0.241  Sum_probs=162.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||++|||++++++|+++  +|++++|+.+++++..+++                   . .  .++.+|++|+++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-------------------~-~--~~~~~D~~~~~~   56 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-------------------G-A--RALPADLADELE   56 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-------------------T-C--EECCCCTTSHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-------------------c-C--cEEEeeCCCHHH
Confidence            58999999999999999999998  9999999988776554443                   1 1  678999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +++++++    ++++|+||||||... ..++.+.+.+++++.+++|+.+++++++.+    +++ +.++||++||. .+.
T Consensus        57 ~~~~~~~----~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~sS~-~~~  125 (207)
T 2yut_A           57 AKALLEE----AGPLDLLVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQ-KGARAVFFGAY-PRY  125 (207)
T ss_dssp             HHHHHHH----HCSEEEEEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEE-EEEEEEEECCC-HHH
T ss_pred             HHHHHHh----cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----Hhc-CCcEEEEEcCh-hhc
Confidence            9998876    689999999999876 577888899999999999999999999987    233 46899999987 455


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV  273 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~  273 (368)
                      .+.++...|++||++++.+++.++.|++++||++++++||++.|++......    ..  .....|+++|+.++..+..+
T Consensus       126 ~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~~~----~~--~~~~~~~dva~~~~~~~~~~  199 (207)
T 2yut_A          126 VQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWAPLGG----PP--KGALSPEEAARKVLEGLFRE  199 (207)
T ss_dssp             HSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGGGGTS----CC--TTCBCHHHHHHHHHHHHC--
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCccccCC----CC--CCCCCHHHHHHHHHHHHhCC
Confidence            6778889999999999999999999999999999999999999998532111    11  11237899999888766543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=8.9e-30  Score=223.88  Aligned_cols=186  Identities=18%  Similarity=0.248  Sum_probs=157.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||++|||++++++|+ +|++|++++|+.+                                  .+.+|++|++++
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------------------------~~~~D~~~~~~~   49 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------------------------DVTVDITNIDSI   49 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------------------------SEECCTTCHHHH
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------------------------ceeeecCCHHHH
Confidence            79999999999999999999 9999999999752                                  268999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++.+    +++|+||||||... ..++.+.+.+++++.+++|+.+++++++.+.|.|++   +++||++||. .+..
T Consensus        50 ~~~~~~~----~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~-~~~~  120 (202)
T 3d7l_A           50 KKMYEQV----GKVDAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGI-MMED  120 (202)
T ss_dssp             HHHHHHH----CCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCG-GGTS
T ss_pred             HHHHHHh----CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcch-hhcC
Confidence            9988764    78999999999875 577888999999999999999999999999998853   4899999987 5667


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      +.+....|+++|++++.+++.++.|+ ++||++++++||++.|++......     ........|+++|+.++..+
T Consensus       121 ~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~~~~-----~~~~~~~~~~dva~~~~~~~  190 (202)
T 3d7l_A          121 PIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVLEESWDKLEPF-----FEGFLPVPAAKVARAFEKSV  190 (202)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCBGGGHHHHGGG-----STTCCCBCHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCccCCchhhhhhh-----ccccCCCCHHHHHHHHHHhh
Confidence            77888999999999999999999999 789999999999999997532110     01111236899988876544

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=1.9e-28  Score=242.78  Aligned_cols=223  Identities=15%  Similarity=0.197  Sum_probs=173.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh---HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS---ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +|++|||||++|||+++|++|+++|+ +|++++|+.   +..+++.+++.+                 .+.++.++.||+
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~~~Dv  301 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ-----------------LGVRVTIAACDA  301 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh-----------------cCCeEEEEEccC
Confidence            48999999999999999999999998 899999974   345566666655                 457899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++++.++ +++|+||||||+.....++.+.+.+++++++++|+.|++++.+.+.+.     ..++||++||
T Consensus       302 td~~~v~~~~~~i~~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~-----~~~~iV~~SS  375 (496)
T 3mje_A          302 ADREALAALLAELPED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADL-----DLDAFVLFSS  375 (496)
T ss_dssp             TCHHHHHHHHHTCCTT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS-----CCSEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc-----CCCEEEEEeC
Confidence            9999999999988776 789999999999733688999999999999999999999998876543     4679999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchh-hhhhhhcCCHHHHHHHhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNK-QMFNIICELPETVARTLV  267 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~pe~~a~~~~  267 (368)
                      . ++..+.+++..|+++|+++++|++.++    +.||++++|+||++.|+.+......... ....+...+|+++++.+.
T Consensus       376 ~-a~~~g~~g~~~YaAaKa~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~  450 (496)
T 3mje_A          376 G-AAVWGSGGQPGYAAANAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALD  450 (496)
T ss_dssp             H-HHHTTCTTCHHHHHHHHHHHHHHHHHH----HTTCCCEEEEECEESSSCC------CHHHHHTTEEEECHHHHHHHHH
T ss_pred             h-HhcCCCCCcHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHH
Confidence            7 577788999999999999998887554    4699999999999977655332111111 111223357999888776


Q ss_pred             hhhhhcccccceeeecc
Q 017635          268 PRIRVVKGSGKAINYLT  284 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~  284 (368)
                      ..+.. ++....+.++.
T Consensus       451 ~~l~~-~~~~~~v~~ld  466 (496)
T 3mje_A          451 QMLEN-DDTAAAITLMD  466 (496)
T ss_dssp             HHHHH-TCSEEEECEEC
T ss_pred             HHHcC-CCceEEEEEcc
Confidence            65543 33444444544

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=1.3e-28  Score=281.19  Aligned_cols=245  Identities=16%  Similarity=0.156  Sum_probs=176.0

Q ss_pred             cCCCCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas~G-IG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..++||++|||||++| ||+++|+.|+++|++|++++|+.++ ..+..+++.++...             .+.++..++|
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-------------~G~~~~~v~~ 2198 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-------------FDATLWVVPA 2198 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-------------TTCEEEEEEC
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-------------cCCeEEEEEe
Confidence            3589999999999999 9999999999999999999998765 22223333332211             3467889999


Q ss_pred             cCCCHHHHHHHHHHHHh----HcCCCCEEEEccCC----CCCCCCCCCCCHHHH----HHHHHhhchHHHHHHHHHHHHH
Q 017635          107 DVCEPADVQKLSNFAVN----EFGSIDIWINNAGT----NKGFKPLLQFTNEEI----EQIVSTNLVGSILCTREAMRVM  174 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~----~~g~iD~li~nAG~----~~~~~~~~~~~~~~~----~~~~~vN~~g~~~l~~~~lp~m  174 (368)
                      |++|.++++++++++.+    ++|++|+||||||+    ........+.+.++|    +..+++|+.+++.+++.+.|.|
T Consensus      2199 Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m 2278 (3089)
T 3zen_D         2199 NMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIG 2278 (3089)
T ss_dssp             CTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998    89999999999997    111122233344444    4559999999999999999999


Q ss_pred             HcCCCCc--EEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCccc-CcccccCcccchh
Q 017635          175 RDQPKGG--HIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVL-TDLLLSGSTIQNK  249 (368)
Q Consensus       175 ~~~~~~g--~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e--~~~~gI~v~~v~PG~v~-T~~~~~~~~~~~~  249 (368)
                      .+++.++  .++...|...+  ..++..+|++||+|+++|+++|+.|  +++ +|+||+++||+|+ |++......    
T Consensus      2279 ~~~~~g~~~~ii~~~ss~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~---- 2351 (3089)
T 3zen_D         2279 AERDIASRLHVVLPGSPNRG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA---- 2351 (3089)
T ss_dssp             HHTTCCCCEEEEEEECSSTT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT----
T ss_pred             HHcCCCceeEEEEECCcccc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh----
Confidence            8763222  23332232122  2345668999999999999999999  665 6999999999999 776532110    


Q ss_pred             hhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHh-hhhhcC--Cce
Q 017635          250 QMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALV-TAWLRR--GRW  302 (368)
Q Consensus       250 ~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~--g~~  302 (368)
                              ..+....... +...|+|++..+.||+++.....+. ..+..|  |++
T Consensus      2352 --------~~~~~~~~~~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~ 2398 (3089)
T 3zen_D         2352 --------IVSAVEEAGV-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGL 2398 (3089)
T ss_dssp             --------THHHHGGGSC-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSC
T ss_pred             --------HHHHHHhcCC-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCc
Confidence                    1111112222 2337888999999999999876544 334433  665

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.95  E-value=5e-29  Score=226.37  Aligned_cols=165  Identities=18%  Similarity=0.206  Sum_probs=140.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |++|||||+||||++++++|+++|++|++++|+.++++                           .   .+.+|++|.++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------------------------~---~~~~D~~~~~~   51 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE---------------------------A---DLSTPGGRETA   51 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE---------------------------C---CTTSHHHHHHH
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc---------------------------c---cccCCcccHHH
Confidence            68999999999999999999999999999999865321                           0   16789999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++   .+++|+||||||....        .+++++.+++|+.++++++++++|.|+++ +.++||++||.. ..
T Consensus        52 ~~~~~~~~---~~~~d~vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~-~~  118 (255)
T 2dkn_A           52 VAAVLDRC---GGVLDGLVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRG-QQPAAVIVGSIA-AT  118 (255)
T ss_dssp             HHHHHHHH---TTCCSEEEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGG-GG
T ss_pred             HHHHHHHc---CCCccEEEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhc-CCceEEEEeccc-cc
Confidence            99888754   3789999999997541        12378999999999999999999999876 468999999874 33


Q ss_pred             CCC--------------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          194 SST--------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       194 ~~~--------------------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      .+.                          +....|++||++++.+++.+++++.++||++++++||++.|++..
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~  192 (255)
T 2dkn_A          119 QPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ  192 (255)
T ss_dssp             STTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH
T ss_pred             cccccccchhhhhcccchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh
Confidence            332                          466789999999999999999999888999999999999999764

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=2.1e-28  Score=255.79  Aligned_cols=179  Identities=18%  Similarity=0.213  Sum_probs=159.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHH-HCCC-eEEEEeCC---hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           32 GPRNVVITGSTRGLGKALAREFL-LSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la-~~G~-~Vil~~R~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+|+++||||++|||+++|++|+ ++|+ +|++++|+   .++.++..+++++                 .+.++.++.|
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~G~~v~~~~~  591 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA-----------------YGAEVSLQAC  591 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEEC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh-----------------cCCcEEEEEe
Confidence            58999999999999999999999 7998 59999999   4556677777765                 4678999999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++.+++ +||+||||||+.. ..++.+++.++|++.+++|+.|++++.+++.|.|       +||++
T Consensus       592 Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~  662 (795)
T 3slk_A          592 DVADRETLAKVLASIPDEH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLF  662 (795)
T ss_dssp             CTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEE
T ss_pred             ecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEE
Confidence            9999999999999988776 9999999999987 5889999999999999999999999999987665       79999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      ||. ++..+.+++..|+++|+    |+++|+++++++||++|+|+||++.|+++.
T Consensus       663 SS~-ag~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~  712 (795)
T 3slk_A          663 SSV-SGVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMA  712 (795)
T ss_dssp             EET-HHHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHH
T ss_pred             ccH-HhcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhh
Confidence            998 67788999999999995    667777788888999999999999998653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=1.1e-26  Score=230.48  Aligned_cols=212  Identities=19%  Similarity=0.178  Sum_probs=166.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChH---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++++|||||++|||++++++|+++|++ |++++|+..   ..++..+++++                 .+.++.++.||
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~~~D  287 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-----------------LGARTTVAACD  287 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHh-----------------cCCEEEEEEeC
Confidence            4789999999999999999999999985 999999875   45556666654                 35689999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++.+ ++++++|+||||||+.. ..++.+.+.+++++++++|+.|++++.+.+.+    . +.++||++|
T Consensus       288 v~d~~~v~~~~~~i-~~~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~-~~~~~V~~S  360 (486)
T 2fr1_A          288 VTDRESVRELLGGI-GDDVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTRE----L-DLTAFVLFS  360 (486)
T ss_dssp             TTCHHHHHHHHHTS-CTTSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----S-CCSEEEEEE
T ss_pred             CCCHHHHHHHHHHH-HhcCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCc----C-CCCEEEEEc
Confidence            99999999999988 66789999999999977 57888999999999999999999999887643    2 468999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc-ccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD-LLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~-~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      |. ++..+.++...|+++|+++++|++.++    ..|+++++|+||++.++ |........ .........+|+++++.+
T Consensus       361 S~-a~~~g~~g~~~Yaaaka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~~~~-~~~~g~~~i~~e~~a~~l  434 (486)
T 2fr1_A          361 SF-ASAFGAPGLGGYAPGNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPVADR-FRRHGVIEMPPETACRAL  434 (486)
T ss_dssp             EH-HHHTCCTTCTTTHHHHHHHHHHHHHHH----HTTCCCEEEEECCBC-------------CTTTTEECBCHHHHHHHH
T ss_pred             Ch-HhcCCCCCCHHHHHHHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhHHHH-HHhcCCCCCCHHHHHHHH
Confidence            87 466777889999999999998876554    45899999999999886 432211000 001122345799999988


Q ss_pred             hhhhhhc
Q 017635          267 VPRIRVV  273 (368)
Q Consensus       267 ~~~~~~~  273 (368)
                      ...+...
T Consensus       435 ~~~l~~~  441 (486)
T 2fr1_A          435 QNALDRA  441 (486)
T ss_dssp             HHHHHTT
T ss_pred             HHHHhCC
Confidence            8777543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=8.5e-26  Score=225.20  Aligned_cols=210  Identities=17%  Similarity=0.199  Sum_probs=168.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+|++|||||++|||++++++|+++|+ +|++++|+..   ..++..+++.+                 .+.++.++.||
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~-----------------~g~~v~~~~~D  320 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG-----------------HGCEVVHAACD  320 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT-----------------TTCEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh-----------------cCCEEEEEEeC
Confidence            478999999999999999999999999 6999999874   34555555543                 35689999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++.     +++|+||||||+.. ..++.+.+.+++++++++|+.|++++.+.+.+.    .+.++||++|
T Consensus       321 vtd~~~v~~~~~~-----~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~----~~~~~~V~~S  390 (511)
T 2z5l_A          321 VAERDALAALVTA-----YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI----KGLDAFVLFS  390 (511)
T ss_dssp             SSCHHHHHHHHHH-----SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC----TTCCCEEEEE
T ss_pred             CCCHHHHHHHHhc-----CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEe
Confidence            9999999998876     68999999999977 578888999999999999999999998875321    1357899999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      |. ++..+.+++..|+++|++++.|++.++    ..|+++++|+||++ +|+|...... .......+...+|+++++.+
T Consensus       391 S~-a~~~g~~g~~~YaaaKa~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~~~-~~~~~~g~~~l~~e~~a~~l  464 (511)
T 2z5l_A          391 SV-TGTWGNAGQGAYAAANAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGAGE-ESLSRRGLRAMDPDAAVDAL  464 (511)
T ss_dssp             EG-GGTTCCTTBHHHHHHHHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCHHH-HHHHHHTBCCBCHHHHHHHH
T ss_pred             CH-HhcCCCCCCHHHHHHHHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccccH-HHHHhcCCCCCCHHHHHHHH
Confidence            87 567788899999999999999988653    56999999999999 7887643211 00011223345899999999


Q ss_pred             hhhhhhcc
Q 017635          267 VPRIRVVK  274 (368)
Q Consensus       267 ~~~~~~~~  274 (368)
                      ...+...+
T Consensus       465 ~~al~~~~  472 (511)
T 2z5l_A          465 LGAMGRND  472 (511)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHhCCC
Confidence            87776443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.93  E-value=2.5e-25  Score=204.21  Aligned_cols=197  Identities=14%  Similarity=0.153  Sum_probs=154.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+||||||+||||++++++|+++|++|++++|+..+.+                          +.++.++.+|++|.
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------------------------~~~~~~~~~Dl~d~   55 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------------------------GPNEECVQCDLADA   55 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------------------------CTTEEEEECCTTCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------------------------CCCCEEEEcCCCCH
Confidence            4589999999999999999999999999999999865421                          24688999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++       ++|+||||||...         .+++++.+++|+.|++++++++.+    + +.++||++||...
T Consensus        56 ~~~~~~~~-------~~D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~  114 (267)
T 3rft_A           56 NAVNAMVA-------GCDGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARA----H-GQPRIVFASSNHT  114 (267)
T ss_dssp             HHHHHHHT-------TCSEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEEEEGGG
T ss_pred             HHHHHHHc-------CCCEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEcchHH
Confidence            99998876       6899999999742         234788999999999999999843    3 4689999998633


Q ss_pred             CC-----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH
Q 017635          192 GG-----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE  260 (368)
Q Consensus       192 ~~-----------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe  260 (368)
                      ..           .+.+....|++||++.+.+++.++.++   |+++++|+||.|.+++....      ....+  ..++
T Consensus       115 ~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~------~~~~~--~~~~  183 (267)
T 3rft_A          115 IGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR------MLSTW--FSHD  183 (267)
T ss_dssp             GTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT------HHHHB--CCHH
T ss_pred             hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC------ceeeE--EcHH
Confidence            21           233556789999999999999999886   78999999999988754221      11111  2577


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHH
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPR  287 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~  287 (368)
                      ++++.+...+ ..++.+..+.|+.++.
T Consensus       184 d~a~~~~~~~-~~~~~~~~~~~~~s~~  209 (267)
T 3rft_A          184 DFVSLIEAVF-RAPVLGCPVVWGASAN  209 (267)
T ss_dssp             HHHHHHHHHH-HCSCCCSCEEEECCCC
T ss_pred             HHHHHHHHHH-hCCCCCceEEEEeCCC
Confidence            8887665444 5566777788888765

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.91  E-value=1.1e-23  Score=189.37  Aligned_cols=193  Identities=16%  Similarity=0.102  Sum_probs=139.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee-EEEe
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV-AGIA  105 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v-~~~~  105 (368)
                      +..++++|+|+||||+|+||++++++|+++|++|++++|+.+++++..    .                   ..+ .++.
T Consensus        15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~----~-------------------~~~~~~~~   71 (236)
T 3e8x_A           15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR----E-------------------RGASDIVV   71 (236)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----H-------------------TTCSEEEE
T ss_pred             cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH----h-------------------CCCceEEE
Confidence            345788999999999999999999999999999999999988765432    1                   246 7899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++         +.+.+.++++|+||||||....         +++++.+++|+.++.++++++...     +.++||+
T Consensus        72 ~Dl~---------~~~~~~~~~~D~vi~~ag~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~  128 (236)
T 3e8x_A           72 ANLE---------EDFSHAFASIDAVVFAAGSGPH---------TGADKTILIDLWGAIKTIQEAEKR-----GIKRFIM  128 (236)
T ss_dssp             CCTT---------SCCGGGGTTCSEEEECCCCCTT---------SCHHHHHHTTTHHHHHHHHHHHHH-----TCCEEEE
T ss_pred             cccH---------HHHHHHHcCCCEEEECCCCCCC---------CCccccchhhHHHHHHHHHHHHHc-----CCCEEEE
Confidence            9999         2344556789999999997531         357889999999999999887442     4679999


Q ss_pred             EcCCCCCCCCC---CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          186 MDGAGSGGSST---PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       186 isS~~~~~~~~---~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      +||.+ ...+.   +....|+.+|++++.+.+       ..|++++.++||++.++....................++++
T Consensus       129 ~SS~~-~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dv  200 (236)
T 3e8x_A          129 VSSVG-TVDPDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSPHFSEITRSITRHDV  200 (236)
T ss_dssp             ECCTT-CSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEESSCSCCCCCEEHHHH
T ss_pred             EecCC-CCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEeccCCCcccCcEeHHHH
Confidence            99863 33332   456899999999998876       45899999999999998643221111000000112258888


Q ss_pred             HHHhhhhhhhc
Q 017635          263 ARTLVPRIRVV  273 (368)
Q Consensus       263 a~~~~~~~~~~  273 (368)
                      |+.++..+..+
T Consensus       201 a~~~~~~~~~~  211 (236)
T 3e8x_A          201 AKVIAELVDQQ  211 (236)
T ss_dssp             HHHHHHHTTCG
T ss_pred             HHHHHHHhcCc
Confidence            88887766543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.88  E-value=4.1e-23  Score=186.15  Aligned_cols=157  Identities=18%  Similarity=0.177  Sum_probs=124.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++|+++||||+||||++++++|+++|+  +|++++|+.+++++.                       ....+.++.+|+
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~D~   72 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-----------------------AYKNVNQEVVDF   72 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-----------------------GGGGCEEEECCG
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-----------------------ccCCceEEecCc
Confidence            4679999999999999999999999999  999999987643211                       012577889999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++       ++|+||||||...        ..++++..+++|+.++..+++++.    +. +.++||++||
T Consensus        73 ~d~~~~~~~~~-------~~d~vi~~ag~~~--------~~~~~~~~~~~n~~~~~~~~~~~~----~~-~~~~iv~~SS  132 (242)
T 2bka_A           73 EKLDDYASAFQ-------GHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAK----AG-GCKHFNLLSS  132 (242)
T ss_dssp             GGGGGGGGGGS-------SCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHH----HT-TCCEEEEECC
T ss_pred             CCHHHHHHHhc-------CCCEEEECCCccc--------ccCCcccceeeeHHHHHHHHHHHH----HC-CCCEEEEEcc
Confidence            99988876653       6999999999743        124578899999999998877653    33 4679999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCccc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~~  240 (368)
                      .. ...  +....|+++|++++.+++.+       ++ ++++|+||++.|++.
T Consensus       133 ~~-~~~--~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~  175 (242)
T 2bka_A          133 KG-ADK--SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQ  175 (242)
T ss_dssp             TT-CCT--TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCEEECTTG
T ss_pred             Cc-CCC--CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCceecCCCC
Confidence            73 332  34568999999999998754       45 899999999999864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=1.3e-21  Score=174.07  Aligned_cols=175  Identities=11%  Similarity=0.141  Sum_probs=129.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la-~~G~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      |+++||||+||||++++++|+ ++|++|++++|+++ +++++.    .                 .+.++.++.+|++|.
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~-----------------~~~~~~~~~~D~~d~   64 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I-----------------DHERVTVIEGSFQNP   64 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H-----------------TSTTEEEEECCTTCH
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c-----------------CCCceEEEECCCCCH
Confidence            789999999999999999999 89999999999987 554332    1                 234688899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++       ++|+||||||..                    |+.     ++.+++.|+++ +.++||++||. .
T Consensus        65 ~~~~~~~~-------~~d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~-~~~~iv~iSs~-~  110 (221)
T 3r6d_A           65 GXLEQAVT-------NAEVVFVGAMES--------------------GSD-----MASIVKALSRX-NIRRVIGVSMA-G  110 (221)
T ss_dssp             HHHHHHHT-------TCSEEEESCCCC--------------------HHH-----HHHHHHHHHHT-TCCEEEEEEET-T
T ss_pred             HHHHHHHc-------CCCEEEEcCCCC--------------------Chh-----HHHHHHHHHhc-CCCeEEEEeec-e
Confidence            99988775       689999999852                    222     78888999877 56899999987 3


Q ss_pred             CCCCCCCch----------hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc-hhhhhhhhcCCHH
Q 017635          192 GGSSTPLTA----------VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ-NKQMFNIICELPE  260 (368)
Q Consensus       192 ~~~~~~~~~----------~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~pe  260 (368)
                      ...+.+...          .|+.+|.+++.+.+.       .|++++.|+||++.++......... ...........++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (221)
T 3r6d_A          111 LSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELIPEGAQFNDAQVSRE  183 (221)
T ss_dssp             TTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEECTTSCCCCCEEEHH
T ss_pred             ecCCCCcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeeccCCccCCCceeeHH
Confidence            444444433          899999999987753       5899999999999887322211111 0001111123578


Q ss_pred             HHHHHhhhhh
Q 017635          261 TVARTLVPRI  270 (368)
Q Consensus       261 ~~a~~~~~~~  270 (368)
                      ++|+.++..+
T Consensus       184 dvA~~~~~l~  193 (221)
T 3r6d_A          184 AVVKAIFDIL  193 (221)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            8888877666

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=4.1e-22  Score=189.57  Aligned_cols=170  Identities=18%  Similarity=0.237  Sum_probs=140.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLS-GD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~-G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++|+||||||+|+||++++++|+++ |+ +|++++|+..+.+++.+++.                   ..++.++.+|
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-------------------~~~v~~~~~D   78 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-------------------DPRMRFFIGD   78 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-------------------CTTEEEEECC
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-------------------CCCEEEEECC
Confidence            467899999999999999999999999 97 99999999887766554441                   2468889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++       ++|+||||||...  .+   ....+..+.+++|+.|+.++++++.+.     +.++||++|
T Consensus        79 l~d~~~l~~~~~-------~~D~Vih~Aa~~~--~~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~-----~v~~~V~~S  141 (344)
T 2gn4_A           79 VRDLERLNYALE-------GVDICIHAAALKH--VP---IAEYNPLECIKTNIMGASNVINACLKN-----AISQVIALS  141 (344)
T ss_dssp             TTCHHHHHHHTT-------TCSEEEECCCCCC--HH---HHHHSHHHHHHHHHHHHHHHHHHHHHT-----TCSEEEEEC
T ss_pred             CCCHHHHHHHHh-------cCCEEEECCCCCC--CC---chhcCHHHHHHHHHHHHHHHHHHHHhC-----CCCEEEEec
Confidence            999998887764       6899999999753  11   122345689999999999999998764     467999998


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      |.. ...   +...|++||++.+.++++++.++++.|+++++++||.|.++.
T Consensus       142 S~~-~~~---p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~  189 (344)
T 2gn4_A          142 TDK-AAN---PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSR  189 (344)
T ss_dssp             CGG-GSS---CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred             CCc-cCC---CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence            863 322   346899999999999999999888889999999999998863

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=1.3e-22  Score=232.72  Aligned_cols=178  Identities=19%  Similarity=0.156  Sum_probs=138.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHH---HHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESV---RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+|++|||||++|||+++|++|+++|++ |++++|+..+.   ++..+++++                 .+.++.++.||
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~g~~v~~~~~D 1945 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRR-----------------QGVQVLVSTSN 1945 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHH-----------------TTCEEEEECCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHh-----------------CCCEEEEEecC
Confidence            5899999999999999999999999997 88899986544   334444433                 35688999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++++. ++|+||+||||||+.. ..++.+++.++|++.+++|+.|++++.+.+.+.|.+   .++||++|
T Consensus      1946 vsd~~~v~~~~~~~~-~~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iS 2020 (2512)
T 2vz8_A         1946 ASSLDGARSLITEAT-QLGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFS 2020 (2512)
T ss_dssp             SSSHHHHHHHHHHHH-HHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEEC
T ss_pred             CCCHHHHHHHHHHHH-hcCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEec
Confidence            999999999999986 4799999999999876 578899999999999999999999999999998864   37999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                      |. ++..+.+++..|+++|+++++|++.++.+    |+...++..|.+.
T Consensus      2021 S~-ag~~g~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2021 SV-SCGRGNAGQANYGFANSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             CH-HHHTTCTTCHHHHHHHHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             ch-hhcCCCCCcHHHHHHHHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            97 57778889999999999999999987764    6777777777653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.87  E-value=1.3e-21  Score=184.78  Aligned_cols=177  Identities=12%  Similarity=0.131  Sum_probs=139.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE-ecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~D  107 (368)
                      ..+++|+||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+...                .+.++.++ .+|
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~~D   70 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK----------------YPGRFETAVVED   70 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH----------------STTTEEEEECSC
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc----------------CCCceEEEEecC
Confidence            3567899999999999999999999999999999999988766554444321                12357777 899


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++       ++|+||||||... ..       +++++.+++|+.++.++++++.+.   . +.++||++|
T Consensus        71 ~~d~~~~~~~~~-------~~d~vih~A~~~~-~~-------~~~~~~~~~n~~g~~~ll~~~~~~---~-~~~~iv~~S  131 (342)
T 1y1p_A           71 MLKQGAYDEVIK-------GAAGVAHIASVVS-FS-------NKYDEVVTPAIGGTLNALRAAAAT---P-SVKRFVLTS  131 (342)
T ss_dssp             TTSTTTTTTTTT-------TCSEEEECCCCCS-CC-------SCHHHHHHHHHHHHHHHHHHHHTC---T-TCCEEEEEC
T ss_pred             CcChHHHHHHHc-------CCCEEEEeCCCCC-CC-------CCHHHHHHHHHHHHHHHHHHHHhC---C-CCcEEEEec
Confidence            999988776653       6999999999754 11       235679999999999999887642   2 457999999


Q ss_pred             CCCCCCCCC------------------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          188 GAGSGGSST------------------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       188 S~~~~~~~~------------------------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                      |......+.                              .....|+.||.+.+.+++.++.++.. ++++++++||.+.+
T Consensus       132 S~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g  210 (342)
T 1y1p_A          132 STVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIG  210 (342)
T ss_dssp             CGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEEC
T ss_pred             cHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceEC
Confidence            874322211                              12368999999999999999999876 89999999999999


Q ss_pred             cccc
Q 017635          238 DLLL  241 (368)
Q Consensus       238 ~~~~  241 (368)
                      +...
T Consensus       211 ~~~~  214 (342)
T 1y1p_A          211 TIFD  214 (342)
T ss_dssp             CCSC
T ss_pred             CCCC
Confidence            8654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.87  E-value=5.4e-22  Score=187.32  Aligned_cols=189  Identities=15%  Similarity=0.082  Sum_probs=145.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChHH------------HHHHHHHHHHHhhhhhhhcCCCCccc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSES------------VRMTVTELEENLKEGMMAAGGSSKKN   95 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la-~~G~~Vil~~R~~~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~   95 (368)
                      ....+|++||||||+|||+|++..|+ +.|++++++++..+.            .....+++++                
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~----------------  109 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKR----------------  109 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHH----------------
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHH----------------
Confidence            35678999999999999999999999 789999999886532            2233344444                


Q ss_pred             ccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC------------CCC--------------------
Q 017635           96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG------------FKP--------------------  143 (368)
Q Consensus        96 ~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~------------~~~--------------------  143 (368)
                       .+.+...+.||++|.++++++++++.+++|+||+||||++....            .+|                    
T Consensus       110 -~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~  188 (401)
T 4ggo_A          110 -EGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEI  188 (401)
T ss_dssp             -HTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEE
T ss_pred             -cCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccc
Confidence             46788999999999999999999999999999999999997521            011                    


Q ss_pred             -CCCCCHHHHHHHHHh---hchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCC--chhhHHHHHHHHHHHHHHH
Q 017635          144 -LLQFTNEEIEQIVST---NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPL--TAVYGSTKCGLRQLQASLF  217 (368)
Q Consensus       144 -~~~~~~~~~~~~~~v---N~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~--~~~Y~aSKaal~~l~~~la  217 (368)
                       +...+.++++.+..+   .....+...+...+.|.   .+++++.+|+.+ .....|.  ...++++|++|+..++.|+
T Consensus       189 ~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla---~G~siva~SYiG-se~t~P~Y~~G~mG~AKaaLEa~~r~La  264 (401)
T 4ggo_A          189 SAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLE---EGCITLAYSYIG-PEATQALYRKGTIGKAKEHLEATAHRLN  264 (401)
T ss_dssp             EECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE---EEEEEEEEECCC-CGGGHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred             cccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhccc---CCceEEEEeccC-cceeecCCCccHHHHHHHHHHHHHHHHH
Confidence             123456666665555   44455556666666664   478999999874 3333343  3478999999999999999


Q ss_pred             HHhCCCCeEEEEEecCcccCccc
Q 017635          218 KESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       218 ~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .++++  +++|+++||.+.|.-.
T Consensus       265 ~eL~~--~~a~v~v~~a~vT~As  285 (401)
T 4ggo_A          265 KENPS--IRAFVSVNKGLVTRAS  285 (401)
T ss_dssp             HHCTT--EEEEEEECCCCCCTTG
T ss_pred             HhcCC--CcEEEEEcCccccchh
Confidence            99984  8999999999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.87  E-value=1.9e-21  Score=183.98  Aligned_cols=174  Identities=20%  Similarity=0.123  Sum_probs=137.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+++||||||+|+||++++++|+++|++|++++|+.++..+..+++...                .+.++.++.+|++|.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~   67 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI----------------TGKTPAFHETDVSDE   67 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH----------------HSCCCEEECCCTTCH
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh----------------cCCCceEEEeecCCH
Confidence            4689999999999999999999999999999999877766666655442                234688899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++.     +++|+||||||... ..    ...+..+..+++|+.++.++++++    ++. +.++||++||...
T Consensus        68 ~~~~~~~~~-----~~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~iv~~SS~~~  132 (341)
T 3enk_A           68 RALARIFDA-----HPITAAIHFAALKA-VG----ESVAKPIEYYRNNLDSLLSLLRVM----RER-AVKRIVFSSSATV  132 (341)
T ss_dssp             HHHHHHHHH-----SCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHH----HHT-TCCEEEEEEEGGG
T ss_pred             HHHHHHHhc-----cCCcEEEECccccc-cC----ccccChHHHHHHHHHHHHHHHHHH----HhC-CCCEEEEEecceE
Confidence            999998875     47999999999754 11    123445678899999999886654    444 4679999998632


Q ss_pred             CC----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          192 GG----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       192 ~~----------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ..          .+......|+.||.+.+.+++.++.++.  |++++.++||.+-.+
T Consensus       133 ~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~  187 (341)
T 3enk_A          133 YGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGA  187 (341)
T ss_dssp             BCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECC
T ss_pred             ecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCC
Confidence            21          1122346899999999999999998874  599999999988765

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.86  E-value=2.4e-21  Score=184.65  Aligned_cols=178  Identities=16%  Similarity=0.066  Sum_probs=140.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++++||||||+|+||++++++|+++|++|++++|+.++.....+.+.                  ...++.++.+|++|
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~d   68 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------------------VADGMQSEIGDIRD   68 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------------------TTTTSEEEECCTTC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc------------------cCCceEEEEccccC
Confidence            467899999999999999999999999999999998765433322221                  12467889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+++.++++.+     ++|+||||||...     .+.+.++++..+++|+.++.++++++.+.    ++.++||++||..
T Consensus        69 ~~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~  134 (357)
T 1rkx_A           69 QNKLLESIREF-----QPEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDK  134 (357)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGG
T ss_pred             HHHHHHHHHhc-----CCCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEecCHH
Confidence            99999988765     6999999999632     12345667899999999999999998763    1357999999863


Q ss_pred             CCC--------C---CCCCchhhHHHHHHHHHHHHHHHHHhC------CCCeEEEEEecCcccCccc
Q 017635          191 SGG--------S---STPLTAVYGSTKCGLRQLQASLFKESK------RSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       191 ~~~--------~---~~~~~~~Y~aSKaal~~l~~~la~e~~------~~gI~v~~v~PG~v~T~~~  240 (368)
                      ...        .   +......|+.||.+.+.+++.++.++.      +.|++++.++||.+.+|..
T Consensus       135 vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~  201 (357)
T 1rkx_A          135 CYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD  201 (357)
T ss_dssp             GBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred             HhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence            211        0   223457899999999999999999885      3489999999999988753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.86  E-value=1.1e-20  Score=178.83  Aligned_cols=172  Identities=16%  Similarity=0.081  Sum_probs=135.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      |+||||||+|+||++++++|+++|++|++++|+. .......+++..                  ..++.++.+|++|.+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~------------------~~~~~~~~~Dl~d~~   63 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS------------------LGNFEFVHGDIRNKN   63 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT------------------TCCCEEEECCTTCHH
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc------------------CCceEEEEcCCCCHH
Confidence            5899999999999999999999999999999853 222223333321                  135788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++..     ++|+||||||....     +.+.++++..+++|+.++.++++++.+.+.    .++||++||....
T Consensus        64 ~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~  129 (347)
T 1orr_A           64 DVTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVY  129 (347)
T ss_dssp             HHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGG
T ss_pred             HHHHHHhcc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHh
Confidence            999888752     69999999997431     223456788999999999999999988642    3689999986321


Q ss_pred             C--------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          193 G--------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       193 ~--------------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .                          .+.+....|+.||.+.+.+++.++.++   |++++.++||.|.++..
T Consensus       130 g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          130 GDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             TTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred             CCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence            1                          122356789999999999999999886   79999999999999864

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.86  E-value=3e-21  Score=182.49  Aligned_cols=177  Identities=16%  Similarity=0.059  Sum_probs=135.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.++.+.  ..+....               ...++.++.+|++|.
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~---------------~~~~~~~~~~Dl~d~   64 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELG---------------IENDVKIIHMDLLEF   64 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTT---------------CTTTEEECCCCTTCH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhcc---------------ccCceeEEECCCCCH
Confidence            57899999999999999999999999999999998765321  1222110               123578899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++.+     ++|+||||||....     +.+.++++..+++|+.|+.++++++.+.   . ..++||++||...
T Consensus        65 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS~~v  130 (345)
T 2z1m_A           65 SNIIRTIEKV-----QPDEVYNLAAQSFV-----GVSFEQPILTAEVDAIGVLRILEALRTV---K-PDTKFYQASTSEM  130 (345)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---C-TTCEEEEEEEGGG
T ss_pred             HHHHHHHHhc-----CCCEEEECCCCcch-----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCceEEEEechhh
Confidence            9999988765     79999999997531     1223467889999999999999998753   1 2379999998632


Q ss_pred             C----------CCCCCCchhhHHHHHHHHHHHHHHHHHhC---CCCeEEEEEecCcccCcc
Q 017635          192 G----------GSSTPLTAVYGSTKCGLRQLQASLFKESK---RSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       192 ~----------~~~~~~~~~Y~aSKaal~~l~~~la~e~~---~~gI~v~~v~PG~v~T~~  239 (368)
                      .          ..+.+....|+.||++.+.+++.++.++.   ..++.++.+.||.+.|.+
T Consensus       131 yg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          131 FGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSH
T ss_pred             cCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcch
Confidence            1          12334567899999999999999998875   345677888999888765

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.85  E-value=2.5e-20  Score=168.35  Aligned_cols=166  Identities=16%  Similarity=0.083  Sum_probs=124.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++|+++||||+|+||++++++|+++  |++|++++|+.++.++.                        ..++.++.+|+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~------------------------~~~~~~~~~D~   57 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI------------------------GGEADVFIGDI   57 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT------------------------TCCTTEEECCT
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc------------------------CCCeeEEEecC
Confidence            35789999999999999999999999  89999999997654321                        13466789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC--------CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  180 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  180 (368)
                      +|.++++++++       ++|+||||||.......        ..+...+++++.+++|+.++.++++++.+.     +.
T Consensus        58 ~d~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~  125 (253)
T 1xq6_A           58 TDADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GV  125 (253)
T ss_dssp             TSHHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TC
T ss_pred             CCHHHHHHHHc-------CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc-----CC
Confidence            99999888764       58999999997541110        011122344568899999999998877543     35


Q ss_pred             cEEEEEcCCCCCCCCCCCch-----hhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          181 GHIFNMDGAGSGGSSTPLTA-----VYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       181 g~Iv~isS~~~~~~~~~~~~-----~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ++||++||.. +..+.+...     .|+.+|.+++.+++.       .|++++.++||++.++..
T Consensus       126 ~~iv~~SS~~-~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~  182 (253)
T 1xq6_A          126 KHIVVVGSMG-GTNPDHPLNKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEG  182 (253)
T ss_dssp             SEEEEEEETT-TTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCS
T ss_pred             CEEEEEcCcc-CCCCCCccccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCc
Confidence            7999999873 333333333     366699999888753       589999999999998763

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.85  E-value=9.2e-20  Score=176.34  Aligned_cols=181  Identities=12%  Similarity=0.073  Sum_probs=135.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH----------------HHHHHHHHhhhhhhhcCCCCc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM----------------TVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~----------------~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      ..++++||||||+|.||++++++|+++|++|++++|+......                ...++...             
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------------   74 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL-------------   74 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH-------------
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc-------------
Confidence            4567899999999999999999999999999999997543211                11111110             


Q ss_pred             ccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHH
Q 017635           94 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRV  173 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~  173 (368)
                         .+.++.++.+|++|.++++++++..     ++|+||||||....  .....++++++..+++|+.|+.++++++.+.
T Consensus        75 ---~~~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~~--~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~  144 (404)
T 1i24_A           75 ---TGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRSA--PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF  144 (404)
T ss_dssp             ---HCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCCH--HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cCCceEEEECCCCCHHHHHHHHhcc-----CCCEEEECCCCCCc--cchhhCccchhhhHHHHHHHHHHHHHHHHHh
Confidence               1246788999999999999888764     69999999997541  1122366778889999999999999988654


Q ss_pred             HHcCCCCcEEEEEcCCCCCC-----------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEE
Q 017635          174 MRDQPKGGHIFNMDGAGSGG-----------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTA  230 (368)
Q Consensus       174 m~~~~~~g~Iv~isS~~~~~-----------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v  230 (368)
                          +.+.+||++||.....                       .+......|+.||.+.+.+++.++.++   |++++++
T Consensus       145 ----~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~iv  217 (404)
T 1i24_A          145 ----GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDL  217 (404)
T ss_dssp             ----CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEE
T ss_pred             ----CCCcEEEEeCcHHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEE
Confidence                1225999999863221                       122345689999999999999998877   7999999


Q ss_pred             ecCcccCccc
Q 017635          231 SPGMVLTDLL  240 (368)
Q Consensus       231 ~PG~v~T~~~  240 (368)
                      +||.|.+|..
T Consensus       218 rp~~v~Gp~~  227 (404)
T 1i24_A          218 NQGVVYGVKT  227 (404)
T ss_dssp             EECEEECSCC
T ss_pred             ecceeeCCCC
Confidence            9999988753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.84  E-value=2.1e-20  Score=175.29  Aligned_cols=168  Identities=18%  Similarity=0.161  Sum_probs=132.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..+.++||||||+|+||++++++|+++|++|++++|+.+. +.                          .++.++.+|++
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~--------------------------l~~~~~~~Dl~   61 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL--------------------------PNVEMISLDIM   61 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC--------------------------TTEEEEECCTT
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc--------------------------ceeeEEECCCC
Confidence            3456899999999999999999999999999999998643 10                          03678899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++.     +++|+||||||....     +.+.++++..+++|+.|+.++++++ +.+.   +.++||++||.
T Consensus        62 d~~~~~~~~~~-----~~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~---~~~~iv~~SS~  127 (321)
T 2pk3_A           62 DSQRVKKVISD-----IKPDYIFHLAAKSSV-----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSN---LDCRILTIGSS  127 (321)
T ss_dssp             CHHHHHHHHHH-----HCCSEEEECCSCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHT---CCCEEEEEEEG
T ss_pred             CHHHHHHHHHh-----cCCCEEEEcCcccch-----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhC---CCCeEEEEccH
Confidence            99999988765     379999999997541     1122357889999999999999998 5552   36799999987


Q ss_pred             CCCCC------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          190 GSGGS------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       190 ~~~~~------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      .....            +.+....|+.||++.+.+++.++.++   |++++.++||.+.+|...
T Consensus       128 ~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~  188 (321)
T 2pk3_A          128 EEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQS  188 (321)
T ss_dssp             GGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred             HhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCC
Confidence            32211            12346789999999999999999875   799999999999887643

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=1.6e-20  Score=171.85  Aligned_cols=180  Identities=16%  Similarity=0.200  Sum_probs=137.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++||||+|+||++++++|+++|++|++++|+.++.                          ....+.++.+|++|.++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------------------------~~~~~~~~~~Dl~d~~~   56 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA--------------------------AEAHEEIVACDLADAQA   56 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC--------------------------CCTTEEECCCCTTCHHH
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc--------------------------cCCCccEEEccCCCHHH
Confidence            6899999999999999999999999999999986431                          01236788999999998


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       ++|+||||||...         .+++++.+++|+.++.++++++.+    . +.++||++||... .
T Consensus        57 ~~~~~~-------~~d~vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~iv~~SS~~~-~  114 (267)
T 3ay3_A           57 VHDLVK-------DCDGIIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARN----L-GKPRIVFASSNHT-I  114 (267)
T ss_dssp             HHHHHT-------TCSEEEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHH----T-TCCEEEEEEEGGG-S
T ss_pred             HHHHHc-------CCCEEEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCHHH-h
Confidence            887765       5899999999742         124578899999999999998764    2 4679999998732 2


Q ss_pred             CCCC------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCcccccCcccchhhhhhhhcCCHH
Q 017635          194 SSTP------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPE  260 (368)
Q Consensus       194 ~~~~------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe  260 (368)
                      ...+            ....|+.+|++++.+++.++.   ..|++++.++||.+ .++..       ......  ...++
T Consensus       115 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~---~~gi~~~~lrp~~v~~~~~~-------~~~~~~--~~~~~  182 (267)
T 3ay3_A          115 GYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYH---KFDIETLNIRIGSCFPKPKD-------ARMMAT--WLSVD  182 (267)
T ss_dssp             TTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH---TTCCCEEEEEECBCSSSCCS-------HHHHHH--BCCHH
T ss_pred             CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH---HcCCCEEEEeceeecCCCCC-------CCeeec--cccHH
Confidence            2111            347899999999999998865   35899999999998 45421       111112  23689


Q ss_pred             HHHHHhhhhhhhc
Q 017635          261 TVARTLVPRIRVV  273 (368)
Q Consensus       261 ~~a~~~~~~~~~~  273 (368)
                      ++|+.++..+..+
T Consensus       183 dva~~~~~~~~~~  195 (267)
T 3ay3_A          183 DFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHhCC
Confidence            9999988777544

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.84  E-value=1.1e-20  Score=178.35  Aligned_cols=203  Identities=14%  Similarity=0.109  Sum_probs=142.0

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ...++++++||||||+|+||++++++|+++|++|++++|+.....+..+                     .-.++.++.+
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------------------~l~~v~~~~~   72 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP---------------------PVAGLSVIEG   72 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC---------------------SCTTEEEEEC
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh---------------------ccCCceEEEe
Confidence            4567889999999999999999999999999999999997543211000                     0035788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++++     ++|+||||||.... .     +.++++  +++|+.++.++++++...     +.++||++
T Consensus        73 Dl~d~~~~~~~~~~~-----~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~~-----~~~~iV~~  134 (330)
T 2pzm_A           73 SVTDAGLLERAFDSF-----KPTHVVHSAAAYKD-P-----DDWAED--AATNVQGSINVAKAASKA-----GVKRLLNF  134 (330)
T ss_dssp             CTTCHHHHHHHHHHH-----CCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHHH-----TCSEEEEE
T ss_pred             eCCCHHHHHHHHhhc-----CCCEEEECCccCCC-c-----cccChh--HHHHHHHHHHHHHHHHHc-----CCCEEEEe
Confidence            999999999988765     79999999997541 1     345565  999999999999998742     46799999


Q ss_pred             cCCCCCCCCC-----C------CchhhHHHHHHHHHHHHHHHHHhCCCCeE-EEEEecCcccCcccccCccc--chhhhh
Q 017635          187 DGAGSGGSST-----P------LTAVYGSTKCGLRQLQASLFKESKRSKVG-VHTASPGMVLTDLLLSGSTI--QNKQMF  252 (368)
Q Consensus       187 sS~~~~~~~~-----~------~~~~Y~aSKaal~~l~~~la~e~~~~gI~-v~~v~PG~v~T~~~~~~~~~--~~~~~~  252 (368)
                      ||... ....     +      ....|++||++++.+++.+  ++....|| ++.+.||. .|++.......  ......
T Consensus       135 SS~~~-~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~  210 (330)
T 2pzm_A          135 QTALC-YGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCF  210 (330)
T ss_dssp             EEGGG-GCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCC
T ss_pred             cCHHH-hCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEe
Confidence            98733 2222     2      5678999999999999877  44444566 56777775 44432110000  000000


Q ss_pred             ----hhhcCCHHHHHH-Hhhhhhhh
Q 017635          253 ----NIICELPETVAR-TLVPRIRV  272 (368)
Q Consensus       253 ----~~~~~~pe~~a~-~~~~~~~~  272 (368)
                          ..-...++++|+ .++..+..
T Consensus       211 ~~~~~~~~i~~~Dva~~a~~~~~~~  235 (330)
T 2pzm_A          211 CSDTVRDFLDMSDFLAIADLSLQEG  235 (330)
T ss_dssp             EESCEECEEEHHHHHHHHHHHTSTT
T ss_pred             CCCCEecceeHHHHHHHHHHHHhhc
Confidence                011136889999 88766654

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.84  E-value=2.5e-20  Score=177.34  Aligned_cols=180  Identities=15%  Similarity=0.059  Sum_probs=136.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++++||||||+|+||++++++|+++|++|++++|+.....+..+++.+.....            ...++.++.+|+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl   90 (352)
T 1sb8_A           23 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------------QWSNFKFIQGDI   90 (352)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------------HHTTEEEEECCT
T ss_pred             cCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccc------------cCCceEEEECCC
Confidence            34567899999999999999999999999999999997542212222222211000            014678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++       ++|+||||||.... .    .+.++++..+++|+.++.++++++.+.     +.++||++||
T Consensus        91 ~d~~~~~~~~~-------~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS  153 (352)
T 1sb8_A           91 RNLDDCNNACA-------GVDYVLHQAALGSV-P----RSINDPITSNATNIDGFLNMLIAARDA-----KVQSFTYAAS  153 (352)
T ss_dssp             TSHHHHHHHHT-------TCSEEEECCSCCCH-H----HHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEEE
T ss_pred             CCHHHHHHHhc-------CCCEEEECCcccCc-h----hhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEecc
Confidence            99998887765       69999999997431 1    134568889999999999999988652     4579999998


Q ss_pred             CCCCCCCC----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGGSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~~~~----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ........          .....|+.+|.+.+.+++.++.++   |++++.++||.+.++..
T Consensus       154 ~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          154 SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             GGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred             HHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCC
Confidence            63321111          235689999999999999999886   79999999999988764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.83  E-value=3.5e-20  Score=164.56  Aligned_cols=179  Identities=18%  Similarity=0.191  Sum_probs=135.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC-HHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE-PAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~  113 (368)
                      +|+||||+|+||++++++|+++|++|++++|+.++.++                         ..++.++.+|++| .++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-------------------------~~~~~~~~~D~~d~~~~   56 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-------------------------YNNVKAVHFDVDWTPEE   56 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-------------------------CTTEEEEECCTTSCHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-------------------------cCCceEEEecccCCHHH
Confidence            69999999999999999999999999999999765321                         1368889999999 988


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       ++|+||||||....             ..+++|+.++.++++++.    +. +.++||++||. .+.
T Consensus        57 ~~~~~~-------~~d~vi~~ag~~~~-------------~~~~~n~~~~~~l~~a~~----~~-~~~~iv~~SS~-~~~  110 (219)
T 3dqp_A           57 MAKQLH-------GMDAIINVSGSGGK-------------SLLKVDLYGAVKLMQAAE----KA-EVKRFILLSTI-FSL  110 (219)
T ss_dssp             HHTTTT-------TCSEEEECCCCTTS-------------SCCCCCCHHHHHHHHHHH----HT-TCCEEEEECCT-TTT
T ss_pred             HHHHHc-------CCCEEEECCcCCCC-------------CcEeEeHHHHHHHHHHHH----Hh-CCCEEEEECcc-ccc
Confidence            877654       69999999997541             167889999999888763    33 45799999987 344


Q ss_pred             CCCCC-------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          194 SSTPL-------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       194 ~~~~~-------~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      .+.+.       ...|+.+|.+.+.+.+      ...|++++.++||++.++........ ......  ...++++|+.+
T Consensus       111 ~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-~~~~~~--~i~~~Dva~~i  181 (219)
T 3dqp_A          111 QPEKWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-NDEVSA--SNTIGDVADTI  181 (219)
T ss_dssp             CGGGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-SSSCCC--CEEHHHHHHHH
T ss_pred             CCCcccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-CCCcCC--cccHHHHHHHH
Confidence            44444       6799999999998886      35689999999999988754321111 111111  12588888888


Q ss_pred             hhhhhhc
Q 017635          267 VPRIRVV  273 (368)
Q Consensus       267 ~~~~~~~  273 (368)
                      +..+..+
T Consensus       182 ~~~l~~~  188 (219)
T 3dqp_A          182 KELVMTD  188 (219)
T ss_dssp             HHHHTCG
T ss_pred             HHHHhCc
Confidence            8766543

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.83  E-value=1.4e-19  Score=174.86  Aligned_cols=176  Identities=14%  Similarity=0.061  Sum_probs=131.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHH-HCCCeEEEEeCChHH---------HHHHHHHHHHHhhhhhhhcCCCCcccccCce---
Q 017635           34 RNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSES---------VRMTVTELEENLKEGMMAAGGSSKKNLVHAK---  100 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la-~~G~~Vil~~R~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---  100 (368)
                      ++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.+.+++....            ....+   
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~   70 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGP------------KPPWADRY   70 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSS------------CCTTTTCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhcc------------ccccCCce
Confidence            489999999999999999999 999999999997654         23332222221000            00113   


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 017635          101 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  180 (368)
Q Consensus       101 v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  180 (368)
                      +.++.+|++|.+++++++++    ++++|+||||||.... .    .+.++++..+++|+.++.++++++..    . +.
T Consensus        71 ~~~~~~Dl~d~~~~~~~~~~----~~~~d~vih~A~~~~~-~----~~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~  136 (397)
T 1gy8_A           71 AALEVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAV-G----ESVRDPLKYYDNNVVGILRLLQAMLL----H-KC  136 (397)
T ss_dssp             CEEEESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TC
T ss_pred             EEEEECCCCCHHHHHHHHHh----cCCCCEEEECCCccCc-C----cchhhHHHHHHHHhHHHHHHHHHHHH----h-CC
Confidence            78899999999998887653    5669999999997541 1    13456788999999999999887543    3 45


Q ss_pred             cEEEEEcCCCCCCCCC-----------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          181 GHIFNMDGAGSGGSST-----------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       181 g~Iv~isS~~~~~~~~-----------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ++||++||........                 .....|+.||++.+.+++.++.++   |++++.++||.+-.+
T Consensus       137 ~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~  208 (397)
T 1gy8_A          137 DKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGA  208 (397)
T ss_dssp             CEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECC
T ss_pred             CEEEEECCHHHhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCC
Confidence            7999999863221111                 125689999999999999999887   799999999998655

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.83  E-value=5.3e-20  Score=165.50  Aligned_cols=177  Identities=12%  Similarity=0.088  Sum_probs=119.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ..|+|+||||+||||++++++|+++| ++|++++|+.+++++.                       ....+.++++|++|
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~Dl~d   78 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-----------------------YPTNSQIIMGDVLN   78 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-----------------------CCTTEEEEECCTTC
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-----------------------ccCCcEEEEecCCC
Confidence            45899999999999999999999999 8999999998754211                       12468889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++       .+|+||||||...         .              ...++.+++.|+++ +.++||++||..
T Consensus        79 ~~~~~~~~~-------~~D~vv~~a~~~~---------~--------------~~~~~~~~~~~~~~-~~~~iV~iSS~~  127 (236)
T 3qvo_A           79 HAALKQAMQ-------GQDIVYANLTGED---------L--------------DIQANSVIAAMKAC-DVKRLIFVLSLG  127 (236)
T ss_dssp             HHHHHHHHT-------TCSEEEEECCSTT---------H--------------HHHHHHHHHHHHHT-TCCEEEEECCCC
T ss_pred             HHHHHHHhc-------CCCEEEEcCCCCc---------h--------------hHHHHHHHHHHHHc-CCCEEEEEecce
Confidence            999988775       5899999998521         0              12356788888877 578999999873


Q ss_pred             CCCCCCCCc-------------hhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcC
Q 017635          191 SGGSSTPLT-------------AVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE  257 (368)
Q Consensus       191 ~~~~~~~~~-------------~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~  257 (368)
                       .....+..             ..|..+|           ..+.+.||++++|+||++.++................-..
T Consensus       128 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~~~~~~~~~~~i  195 (236)
T 3qvo_A          128 -IYDEVPGKFVEWNNAVIGEPLKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIV  195 (236)
T ss_dssp             -C----------------CGGGHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCEEECTTSCCSCSEE
T ss_pred             -ecCCCCcccccchhhcccchHHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceEEeccCCCCCCcEE
Confidence             33333221             2233332           2334679999999999999875432111111000000112


Q ss_pred             CHHHHHHHhhhhhhhcc
Q 017635          258 LPETVARTLVPRIRVVK  274 (368)
Q Consensus       258 ~pe~~a~~~~~~~~~~~  274 (368)
                      .++++|+.++..+..+.
T Consensus       196 ~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          196 SRKSVAALITDIIDKPE  212 (236)
T ss_dssp             EHHHHHHHHHHHHHSTT
T ss_pred             CHHHHHHHHHHHHcCcc
Confidence            58888888877765544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.83  E-value=2.5e-20  Score=175.92  Aligned_cols=170  Identities=14%  Similarity=0.100  Sum_probs=132.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++||||||+|+||++++++|+++|  ++|++++|+..  ..+.+ +++.                  ...++.++.+|+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl   63 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE------------------DDPRYTFVKGDV   63 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT------------------TCTTEEEEECCT
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc------------------cCCceEEEEcCC
Confidence            4579999999999999999999997  89999998642  11110 1110                  124688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+++++++       +++|+||||||...     .+.+.++++..+++|+.++.++++++.+.   . ..++||++||
T Consensus        64 ~d~~~~~~~~-------~~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~-~~~~iv~~SS  127 (336)
T 2hun_A           64 ADYELVKELV-------RKVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE---N-PEVRFVHVST  127 (336)
T ss_dssp             TCHHHHHHHH-------HTCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH---C-TTSEEEEEEE
T ss_pred             CCHHHHHHHh-------hCCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh---C-CCcEEEEecc
Confidence            9999988876       27999999999743     12234567889999999999999999876   1 3479999998


Q ss_pred             CCCCC-C---------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGG-S---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~-~---------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ..... .         +.+....|+.||++.+.+++.++.++   |++++.++||.|.++..
T Consensus       128 ~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          128 DEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             GGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTC
T ss_pred             HHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCC
Confidence            63211 1         23456789999999999999999876   79999999999998864

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.83  E-value=3.2e-20  Score=176.90  Aligned_cols=174  Identities=13%  Similarity=0.161  Sum_probs=135.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLLS-GDRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+ +++.                  .+.++.++.+|++|.
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~------------------~~~~~~~~~~Dl~d~   62 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS------------------ESNRYNFEHADICDS   62 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT------------------TCTTEEEEECCTTCH
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh------------------cCCCeEEEECCCCCH
Confidence            5999999999999999999998 799999998642  11110 1110                  124688899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC----CCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP----KGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~----~~g~Iv~is  187 (368)
                      +++++++++.     ++|+||||||...     .+.+.+++++.+++|+.|+.++++++.+.|...+    ++++||++|
T Consensus        63 ~~~~~~~~~~-----~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~S  132 (361)
T 1kew_A           63 AEITRIFEQY-----QPDAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIS  132 (361)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEE
T ss_pred             HHHHHHHhhc-----CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeC
Confidence            9999888752     7999999999753     1234456788999999999999999999875321    135999999


Q ss_pred             CCCCCC-C-------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          188 GAGSGG-S-------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       188 S~~~~~-~-------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      |..... .                   +.+....|+.||++.+.+++.++.++   |++++.++||.|.++..
T Consensus       133 S~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          133 TDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             EGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             CHHHhCCCcccccccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence            863211 1                   12445789999999999999999887   79999999999999874

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.83  E-value=3.5e-20  Score=175.14  Aligned_cols=176  Identities=14%  Similarity=0.141  Sum_probs=127.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..++|+||||||+|+||++++++|+++|++|+++.|+.+..++.. .+.+ ...             ...++.++.+|++
T Consensus         2 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~-------------~~~~~~~~~~Dl~   66 (337)
T 2c29_D            2 GSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLD-LPK-------------AETHLTLWKADLA   66 (337)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHT-STT-------------HHHHEEEEECCTT
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHh-ccc-------------CCCeEEEEEcCCC
Confidence            346799999999999999999999999999999999876443221 1111 000             0135788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++       .+|+|||+|+...    ....+  ..+..+++|+.|+.++++++.+..    ..++||++||.
T Consensus        67 d~~~~~~~~~-------~~d~Vih~A~~~~----~~~~~--~~~~~~~~nv~gt~~ll~a~~~~~----~~~riV~~SS~  129 (337)
T 2c29_D           67 DEGSFDEAIK-------GCTGVFHVATPMD----FESKD--PENEVIKPTIEGMLGIMKSCAAAK----TVRRLVFTSSA  129 (337)
T ss_dssp             STTTTHHHHT-------TCSEEEECCCCCC----SSCSS--HHHHTHHHHHHHHHHHHHHHHHHS----CCCEEEEECCG
T ss_pred             CHHHHHHHHc-------CCCEEEEeccccC----CCCCC--hHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEeeeH
Confidence            9988877764       5899999998542    11222  235789999999999999887652    25799999987


Q ss_pred             CCCCC-CC--------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          190 GSGGS-ST--------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       190 ~~~~~-~~--------------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .+... ..                    +....|+.||.+.+.+++.++.+.   |+++++++||.|.+|..
T Consensus       130 ~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~  198 (337)
T 2c29_D          130 GTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFI  198 (337)
T ss_dssp             GGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCS
T ss_pred             hhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCC
Confidence            32111 00                    123469999999999988777554   79999999999998864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.82  E-value=8.3e-20  Score=162.75  Aligned_cols=195  Identities=16%  Similarity=0.123  Sum_probs=139.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++|+||||+|+||++++++|+++|++|++++|+.++.+.                        ....+.++.+|++|.++
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------------------~~~~~~~~~~Dl~d~~~   60 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI------------------------ENEHLKVKKADVSSLDE   60 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC------------------------CCTTEEEECCCTTCHHH
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh------------------------ccCceEEEEecCCCHHH
Confidence            789999999999999999999999999999999765321                        12468899999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       ++|+||||||....        .   ...+++|+.++.++++++..    . +.+++|++||.+ ..
T Consensus        61 ~~~~~~-------~~d~vi~~a~~~~~--------~---~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~~-~~  116 (227)
T 3dhn_A           61 VCEVCK-------GADAVISAFNPGWN--------N---PDIYDETIKVYLTIIDGVKK----A-GVNRFLMVGGAG-SL  116 (227)
T ss_dssp             HHHHHT-------TCSEEEECCCC-----------------CCSHHHHHHHHHHHHHHH----T-TCSEEEEECCST-TS
T ss_pred             HHHHhc-------CCCEEEEeCcCCCC--------C---hhHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCChh-hc
Confidence            988775       58999999986421        1   12678899998888777644    3 356999999873 22


Q ss_pred             CCC----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh-----hhhhcCC
Q 017635          194 SST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-----FNIICEL  258 (368)
Q Consensus       194 ~~~----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-----~~~~~~~  258 (368)
                      .+.          .....|+.+|.+.+.+.+.++.   ..|++++.++||.+.++.............     ...-...
T Consensus       117 ~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~  193 (227)
T 3dhn_A          117 FIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDIVGNSHIS  193 (227)
T ss_dssp             EEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCTTSCCEEE
T ss_pred             cCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCCCcccCCCCCcEEe
Confidence            222          2357899999999998888775   358999999999997765322111100000     0011125


Q ss_pred             HHHHHHHhhhhhhhcccccce
Q 017635          259 PETVARTLVPRIRVVKGSGKA  279 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~  279 (368)
                      ++++|+.++..+..++..++.
T Consensus       194 ~~Dva~ai~~~l~~~~~~g~~  214 (227)
T 3dhn_A          194 VEDYAAAMIDELEHPKHHQER  214 (227)
T ss_dssp             HHHHHHHHHHHHHSCCCCSEE
T ss_pred             HHHHHHHHHHHHhCccccCcE
Confidence            888898888887766544443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.82  E-value=1.5e-19  Score=171.32  Aligned_cols=173  Identities=17%  Similarity=0.097  Sum_probs=131.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH------HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES------VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +|+|+||||+|+||.+++++|+++|++|++++|+...      ..+..+++.+.                .+.++.++.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~----------------~~~~~~~~~~   65 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEFEEM   65 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc----------------cCCceEEEEC
Confidence            4789999999999999999999999999999986432      22233333321                1246788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++..     ++|+||||||.... .    .+.+++++.+++|+.++.++++++.    +. +.++||++
T Consensus        66 D~~~~~~~~~~~~~~-----~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~iv~~  130 (348)
T 1ek6_A           66 DILDQGALQRLFKKY-----SFMAVIHFAGLKAV-G----ESVQKPLDYYRVNLTGTIQLLEIMK----AH-GVKNLVFS  130 (348)
T ss_dssp             CTTCHHHHHHHHHHC-----CEEEEEECCSCCCH-H----HHHHCHHHHHHHHHHHHHHHHHHHH----HT-TCCEEEEE
T ss_pred             CCCCHHHHHHHHHhc-----CCCEEEECCCCcCc-c----chhhchHHHHHHHHHHHHHHHHHHH----Hh-CCCEEEEE
Confidence            999999998887652     79999999997531 1    1345678899999999999988653    33 45799999


Q ss_pred             cCCCCCCC----------C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          187 DGAGSGGS----------S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       187 sS~~~~~~----------~-~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ||......          + .|....|+.||++.+.+++.++.+  ..++++..++|+.+-.+
T Consensus       131 SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          131 SSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             EEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred             CcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence            98633211          1 123678999999999999999887  34699999999887654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.82  E-value=4e-20  Score=175.02  Aligned_cols=176  Identities=15%  Similarity=0.158  Sum_probs=133.1

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCC-------CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSG-------DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G-------~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      +++.+++++|+||||+|+||.+++++|+++|       ++|++++|+.++...      .                 ...
T Consensus         8 ~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~-----------------~~~   64 (342)
T 2hrz_A            8 ENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G-----------------FSG   64 (342)
T ss_dssp             CCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T-----------------CCS
T ss_pred             CCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c-----------------cCC
Confidence            3456788999999999999999999999999       899999997643210      0                 235


Q ss_pred             eeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       100 ~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      ++.++.+|++|.++++++++      +++|+||||||...      ..+.+++++.+++|+.|+.++++++.+...+.+.
T Consensus        65 ~~~~~~~Dl~d~~~~~~~~~------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~  132 (342)
T 2hrz_A           65 AVDARAADLSAPGEAEKLVE------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGY  132 (342)
T ss_dssp             EEEEEECCTTSTTHHHHHHH------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCC
T ss_pred             ceeEEEcCCCCHHHHHHHHh------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCC
Confidence            68889999999999888765      37999999999743      1245678899999999999999998775432212


Q ss_pred             CcEEEEEcCCCCCCCCCC----------CchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEe--cCcccC
Q 017635          180 GGHIFNMDGAGSGGSSTP----------LTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTAS--PGMVLT  237 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~----------~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~--PG~v~T  237 (368)
                      .++||++||........+          ....|+.||++.+.+++.++.+..  ...+|++.+.  ||.+.+
T Consensus       133 ~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          133 KPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             CCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred             CcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcc
Confidence            479999998733221112          457899999999999999887632  2346777776  887654

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.82  E-value=8.8e-19  Score=153.29  Aligned_cols=184  Identities=14%  Similarity=0.019  Sum_probs=128.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++++||||+|+||++++++|+++|++|++++|+.++.+..                       ...++.++.+|++|++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~D~~~~~   59 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------------------GPRPAHVVVGDVLQAA   59 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------------------SCCCSEEEESCTTSHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-----------------------cCCceEEEEecCCCHH
Confidence            37899999999999999999999999999999997653210                       1246788999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++       .+|++|||||....    .+.        .++|+.++..+++++.+.     +.+++|++||.. .
T Consensus        60 ~~~~~~~-------~~d~vi~~a~~~~~----~~~--------~~~n~~~~~~~~~~~~~~-----~~~~~v~~Ss~~-~  114 (206)
T 1hdo_A           60 DVDKTVA-------GQDAVIVLLGTRND----LSP--------TTVMSEGARNIVAAMKAH-----GVDKVVACTSAF-L  114 (206)
T ss_dssp             HHHHHHT-------TCSEEEECCCCTTC----CSC--------CCHHHHHHHHHHHHHHHH-----TCCEEEEECCGG-G
T ss_pred             HHHHHHc-------CCCEEEECccCCCC----CCc--------cchHHHHHHHHHHHHHHh-----CCCeEEEEeeee-e
Confidence            8887764       58999999997542    111        137888888887766542     457999999873 3


Q ss_pred             CCCCC----CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc-cCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          193 GSSTP----LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV-LTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       193 ~~~~~----~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v-~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      ....+    ....|+.+|.+++.+.+.       .|++++.++||.+ .++......... ..........++++|+.++
T Consensus       115 ~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~~  186 (206)
T 1hdo_A          115 LWDPTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYTVTL-DGRGPSRVISKHDLGHFML  186 (206)
T ss_dssp             TSCTTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCEEES-SSCSSCSEEEHHHHHHHHH
T ss_pred             ccCcccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceEecc-cCCCCCCccCHHHHHHHHH
Confidence            32222    567899999999998742       5899999999998 343321110000 0000011225777887777


Q ss_pred             hhhhh
Q 017635          268 PRIRV  272 (368)
Q Consensus       268 ~~~~~  272 (368)
                      ..+..
T Consensus       187 ~~~~~  191 (206)
T 1hdo_A          187 RCLTT  191 (206)
T ss_dssp             HTTSC
T ss_pred             HHhcC
Confidence            66543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.81  E-value=1.5e-19  Score=171.76  Aligned_cols=181  Identities=13%  Similarity=0.063  Sum_probs=138.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|++++|+||||||+|+||++++++|+++|++|++++|+.........++.......            ...++.++.+|
T Consensus        20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~D   87 (351)
T 3ruf_A           20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTE------------QWSRFCFIEGD   87 (351)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHH------------HHTTEEEEECC
T ss_pred             hCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccc------------cCCceEEEEcc
Confidence            455678999999999999999999999999999999997655444444443321100            01468899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++       ++|+|||+||....     ..+.++....+++|+.++.++++++...     +.+++|++|
T Consensus        88 l~d~~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~S  150 (351)
T 3ruf_A           88 IRDLTTCEQVMK-------GVDHVLHQAALGSV-----PRSIVDPITTNATNITGFLNILHAAKNA-----QVQSFTYAA  150 (351)
T ss_dssp             TTCHHHHHHHTT-------TCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TCSEEEEEE
T ss_pred             CCCHHHHHHHhc-------CCCEEEECCccCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEe
Confidence            999998887765       69999999997431     2244567789999999999998887542     356999999


Q ss_pred             CCCCCCCCC----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          188 GAGSGGSST----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       188 S~~~~~~~~----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      |........          .....|+.+|.+.+.+++.++.+.   |++++.++||.+-.+..
T Consensus       151 S~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          151 SSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             EGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTC
T ss_pred             cHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCC
Confidence            863221111          224689999999999999998876   79999999999877643

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.81  E-value=4.9e-19  Score=169.36  Aligned_cols=175  Identities=14%  Similarity=0.044  Sum_probs=123.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|+|+||||+|+||++++++|+++|++|++++|+.++.. +..+++.+...             ..+.++.++.+|++|.
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~Dl~d~   67 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-------------TCNPKFHLHYGDLSDT   67 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccc-------------cCCCceEEEECCCCCH
Confidence            378999999999999999999999999999999865421 11122211000             0124678899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++.+     ++|+||||||....     ..+.++++..+++|+.++.++++++.+.+.+  +.++||++||...
T Consensus        68 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~iv~~SS~~v  135 (372)
T 1db3_A           68 SNLTRILREV-----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLE--KKTRFYQASTSEL  135 (372)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEEGGG
T ss_pred             HHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCChhh
Confidence            9999988765     69999999997541     2234457889999999999999998775432  2479999998632


Q ss_pred             CCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcc
Q 017635          192 GGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMV  235 (368)
Q Consensus       192 ~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v  235 (368)
                      ...          +......|+.||++.+.+++.++.++   |+.+..+.|..+
T Consensus       136 ~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~  186 (372)
T 1db3_A          136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNH  186 (372)
T ss_dssp             GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCE
T ss_pred             hCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCc
Confidence            111          11235789999999999999999886   466666665444

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.81  E-value=3e-19  Score=168.80  Aligned_cols=160  Identities=19%  Similarity=0.201  Sum_probs=122.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++|+||||+|+||++++++|+++|++|++++|+.++.++    +                   ...++.++.+|++|.++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l-------------------~~~~~~~~~~Dl~d~~~   70 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----L-------------------AYLEPECRVAEMLDHAG   70 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----G-------------------GGGCCEEEECCTTCHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----h-------------------ccCCeEEEEecCCCHHH
Confidence            389999999999999999999999999999998764321    1                   11257789999999998


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       ++|+|||+||...       .+.+++++.+++|+.++.++++++.+.     +.+++|++||.. ..
T Consensus        71 ~~~~~~-------~~d~vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~~v~~SS~~-~~  130 (342)
T 2x4g_A           71 LERALR-------GLDGVIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA-----RVPRILYVGSAY-AM  130 (342)
T ss_dssp             HHHHTT-------TCSEEEEC-------------------CHHHHHHHHHHHHHHHHHHH-----TCSCEEEECCGG-GS
T ss_pred             HHHHHc-------CCCEEEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEECCHH-hh
Confidence            887764       5899999999643       234567889999999999999998774     357899999873 32


Q ss_pred             CCCCC----------------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          194 SSTPL----------------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       194 ~~~~~----------------~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ...+.                ...|+.+|.+.+.+++.++.   . |++++.++||.+.++..
T Consensus       131 ~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          131 PRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             CCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCC
T ss_pred             CcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCC
Confidence            22222                67899999999999999886   3 79999999999988764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.80  E-value=5.8e-19  Score=167.31  Aligned_cols=159  Identities=10%  Similarity=0.044  Sum_probs=124.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +..+.++|+||||||+|+||.+++++|+++|++|++++|+.++                             .++.++.+
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------------------------~~~~~~~~   63 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------------------------TGGEEVVG   63 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------------------------SCCSEEES
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------------------------CCccEEec
Confidence            3456788999999999999999999999999999999998643                             24677899


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.+++.++++       ++|+|||+|+...       .+.++++..+++|+.++.++++++..    . +.++||++
T Consensus        64 Dl~d~~~~~~~~~-------~~d~vih~A~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~----~-~~~~~V~~  124 (347)
T 4id9_A           64 SLEDGQALSDAIM-------GVSAVLHLGAFMS-------WAPADRDRMFAVNVEGTRRLLDAASA----A-GVRRFVFA  124 (347)
T ss_dssp             CTTCHHHHHHHHT-------TCSEEEECCCCCC-------SSGGGHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEE
T ss_pred             CcCCHHHHHHHHh-------CCCEEEECCcccC-------cchhhHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEE
Confidence            9999999887765       6999999999754       23344589999999999999888754    3 46799999


Q ss_pred             cCCCCCCC------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          187 DGAGSGGS------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       187 sS~~~~~~------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                      ||......            +......|+.+|.+.+.+++.++.+.   |++++.++|+.+-
T Consensus       125 SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~  183 (347)
T 4id9_A          125 SSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ  183 (347)
T ss_dssp             EEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred             CCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence            98532211            22345789999999999999998874   7999999999887

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.80  E-value=4.3e-19  Score=170.54  Aligned_cols=161  Identities=15%  Similarity=0.105  Sum_probs=123.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCc-eeEEEecc
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHA-KVAGIACD  107 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~D  107 (368)
                      |+||||||+|+||.+++++|+++|++|++++|+.++     ++....++..                 .+. ++.++.+|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~D   91 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN-----------------VNKALMKLHYAD   91 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC-------------------------CCEEEEECC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhcccc-----------------ccccceEEEECC
Confidence            789999999999999999999999999999998653     2111111100                 112 67889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.++++++++.+     ++|+||||||....     ..+.++++..+++|+.++.++++++.+.+.++++.++||++|
T Consensus        92 l~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~S  161 (381)
T 1n7h_A           92 LTDASSLRRWIDVI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAG  161 (381)
T ss_dssp             TTCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_pred             CCCHHHHHHHHHhc-----CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeC
Confidence            99999999888765     69999999997541     123466889999999999999999999876543457999999


Q ss_pred             CCCCCCC---------CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 017635          188 GAGSGGS---------STPLTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       188 S~~~~~~---------~~~~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      |......         +......|+.+|.+.+.+++.++.++.
T Consensus       162 S~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          162 SSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             EGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence            8632111         234457899999999999999998763

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.80  E-value=2.4e-19  Score=172.54  Aligned_cols=172  Identities=13%  Similarity=0.019  Sum_probs=133.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..++.++++|+||||+|+||++++++|+++|++|++++|+..+....                       ...++.++.+
T Consensus        23 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------------~~~~v~~~~~   79 (379)
T 2c5a_A           23 QYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----------------------DMFCDEFHLV   79 (379)
T ss_dssp             CSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----------------------GGTCSEEEEC
T ss_pred             ccccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----------------------ccCCceEEEC
Confidence            44556778999999999999999999999999999999986542100                       1135778999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++       ++|+|||+||... ....   +.++++..+++|+.++.++++++..    . +.++||++
T Consensus        80 Dl~d~~~~~~~~~-------~~d~Vih~A~~~~-~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~-~~~~~V~~  143 (379)
T 2c5a_A           80 DLRVMENCLKVTE-------GVDHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMIEAARI----N-GIKRFFYA  143 (379)
T ss_dssp             CTTSHHHHHHHHT-------TCSEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHHH----T-TCSEEEEE
T ss_pred             CCCCHHHHHHHhC-------CCCEEEECceecC-cccc---cccCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEE
Confidence            9999999887764       6999999999753 1111   1235688999999999999988754    2 35699999


Q ss_pred             cCCCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          187 DGAGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       187 sS~~~~~~-----------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ||......                 +......|+.+|.+.+.+++.++.+.   |++++.++||.+.++..
T Consensus       144 SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          144 SSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             EEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             eehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence            98632211                 22345689999999999999998776   79999999999988753

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.80  E-value=2e-19  Score=168.02  Aligned_cols=165  Identities=14%  Similarity=0.103  Sum_probs=128.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ++|||||+|+||++++++|+++|++|++++|......+   .                    ....+.++.+|++|.+++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~--------------------~~~~~~~~~~Dl~~~~~~   58 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---N--------------------VPKGVPFFRVDLRDKEGV   58 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---G--------------------SCTTCCEECCCTTCHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---h--------------------cccCeEEEECCCCCHHHH
Confidence            69999999999999999999999999999985422100   0                    112466789999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC-CC-C
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA-GS-G  192 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~-~~-~  192 (368)
                      +++++..     ++|++||+||....     ..+.++++..+++|+.|++++++++..    . +.++||++||. .. +
T Consensus        59 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~----~-~~~~iv~~SS~~~~~g  123 (311)
T 2p5y_A           59 ERAFREF-----RPTHVSHQAAQASV-----KVSVEDPVLDFEVNLLGGLNLLEACRQ----Y-GVEKLVFASTGGAIYG  123 (311)
T ss_dssp             HHHHHHH-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCSEEEEEEEHHHHHC
T ss_pred             HHHHHhc-----CCCEEEECccccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCEEEEeCCChhhcC
Confidence            8887642     69999999997431     124456788999999999999988753    2 35799999986 11 1


Q ss_pred             C----CC------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          193 G----SS------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       193 ~----~~------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .    .+      ......|++||++.+.+++.++.++   |++++.++||.+.+|..
T Consensus       124 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          124 EVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             CCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             CCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence            1    01      1235689999999999999998876   79999999999988754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.80  E-value=3.6e-19  Score=168.73  Aligned_cols=167  Identities=14%  Similarity=0.180  Sum_probs=130.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      |+||||||+|+||++++++|+++  |++|++++|+.... .+..+++                   ...++.++.+|++|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~~Dl~d   65 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-------------------LGDRVELVVGDIAD   65 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-------------------CSSSEEEEECCTTC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh-------------------ccCCeEEEECCCCC
Confidence            68999999999999999999998  89999999974210 0000000                   12468889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++       .+|+||||||....     +.+.++++..+++|+.++.++++++.+.     + ++||++||..
T Consensus        66 ~~~~~~~~~-------~~d~vih~A~~~~~-----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-----~-~~~v~~SS~~  127 (348)
T 1oc2_A           66 AELVDKLAA-------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY-----D-IRFHHVSTDE  127 (348)
T ss_dssp             HHHHHHHHT-------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH-----T-CEEEEEEEGG
T ss_pred             HHHHHHHhh-------cCCEEEECCcccCc-----cchhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CeEEEecccc
Confidence            998887765       46999999997531     2234567889999999999999998875     2 3999999863


Q ss_pred             CCCC----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          191 SGGS----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       191 ~~~~----------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ....                      +.+....|+.||.+.+.+++.++.++   |++++.++||.+.++..
T Consensus       128 vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          128 VYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             GGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred             eeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCC
Confidence            2111                      22345789999999999999999887   79999999999988764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=1e-18  Score=165.01  Aligned_cols=169  Identities=17%  Similarity=0.147  Sum_probs=124.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|+||++++++|+++|++|++++|......+..+++.+.                .+.++.++.+|++|++++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~~~~~~   65 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALM   65 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh----------------cCCcceEEEccCCCHHHH
Confidence            6999999999999999999999999999987432211122223221                123577889999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++..     ++|+||||||... ..    ...++.+..+++|+.++.++++++..    . +.++||++||......
T Consensus        66 ~~~~~~~-----~~D~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~iv~~SS~~~~g~  130 (338)
T 1udb_A           66 TEILHDH-----AIDTVIHFAGLKA-VG----ESVQKPLEYYDNNVNGTLRLISAMRA----A-NVKNFIFSSSATVYGD  130 (338)
T ss_dssp             HHHHHHT-----TCSEEEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEEEEGGGGCS
T ss_pred             HHHhhcc-----CCCEEEECCccCc-cc----cchhcHHHHHHHHHHHHHHHHHHHHh----c-CCCeEEEEccHHHhCC
Confidence            8887642     6999999999743 11    12345677899999999999876533    2 3579999998632211


Q ss_pred             ----------CC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          195 ----------ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       195 ----------~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                                +. +....|++||++++.+++.++.+.  .|+++..++|+.+-
T Consensus       131 ~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~  181 (338)
T 1udb_A          131 NPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPV  181 (338)
T ss_dssp             CCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEE
T ss_pred             CCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceec
Confidence                      11 236789999999999999999874  37899999886553

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.80  E-value=2.2e-18  Score=153.07  Aligned_cols=189  Identities=12%  Similarity=0.083  Sum_probs=128.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|+||++++++|+++|++|++++|+.+++++.                       ....+.++.+|++|.++ 
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~~D~~d~~~-   57 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----------------------LGATVATLVKEPLVLTE-   57 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----------------------TCTTSEEEECCGGGCCH-
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-----------------------cCCCceEEecccccccH-
Confidence            599999999999999999999999999999998765432                       12357889999999887 


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                              +.+.++|+||||||.... .   .        ..++|+.++    +.+++.+++. + +++|++||.++ ..
T Consensus        58 --------~~~~~~d~vi~~ag~~~~-~---~--------~~~~n~~~~----~~l~~a~~~~-~-~~~v~~SS~~~-~~  110 (224)
T 3h2s_A           58 --------ADLDSVDAVVDALSVPWG-S---G--------RGYLHLDFA----THLVSLLRNS-D-TLAVFILGSAS-LA  110 (224)
T ss_dssp             --------HHHTTCSEEEECCCCCTT-S---S--------CTHHHHHHH----HHHHHTCTTC-C-CEEEEECCGGG-SB
T ss_pred             --------hhcccCCEEEECCccCCC-c---c--------hhhHHHHHH----HHHHHHHHHc-C-CcEEEEeccee-ec
Confidence                    223579999999998521 1   0        024566665    4456666665 4 89999998632 22


Q ss_pred             CCCC--------------chhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh----hhhhc
Q 017635          195 STPL--------------TAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM----FNIIC  256 (368)
Q Consensus       195 ~~~~--------------~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~----~~~~~  256 (368)
                      +.+.              ...|+.+|.+.+.+    .......|++++.++||++.++............+    ...-.
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  186 (224)
T 3h2s_A          111 MPGADHPMILDFPESAASQPWYDGALYQYYEY----QFLQMNANVNWIGISPSEAFPSGPATSYVAGKDTLLVGEDGQSH  186 (224)
T ss_dssp             CTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH----HHHTTCTTSCEEEEEECSBCCCCCCCCEEEESSBCCCCTTSCCB
T ss_pred             cCCCCccccccCCCCCccchhhHHHHHHHHHH----HHHHhcCCCcEEEEcCccccCCCcccCceecccccccCCCCCce
Confidence            2222              56899999998854    22234578999999999999873222110000000    00112


Q ss_pred             CCHHHHHHHhhhhhhhcccccc
Q 017635          257 ELPETVARTLVPRIRVVKGSGK  278 (368)
Q Consensus       257 ~~pe~~a~~~~~~~~~~~~~~~  278 (368)
                      ..++++|+.++..+..++..++
T Consensus       187 i~~~DvA~~~~~~l~~~~~~g~  208 (224)
T 3h2s_A          187 ITTGNMALAILDQLEHPTAIRD  208 (224)
T ss_dssp             CCHHHHHHHHHHHHHSCCCTTS
T ss_pred             EeHHHHHHHHHHHhcCccccCC
Confidence            3689999999888876654444

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.80  E-value=8.4e-19  Score=168.16  Aligned_cols=174  Identities=14%  Similarity=0.025  Sum_probs=129.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-----HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-----VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     ++...+++...                ...++.++.+|+
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~----------------~~~~~~~~~~Dl   88 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH----------------IEGNMKLHYGDL   88 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------------------CEEEEECCT
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc----------------cCCCceEEEccC
Confidence            789999999999999999999999999999998543     11111110000                123578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+     ++|+||||||....     ..+.++++..+++|+.++.++++++.+...+  +.++||++||
T Consensus        89 ~d~~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~--~~~~iv~~SS  156 (375)
T 1t2a_A           89 TDSTCLVKIINEV-----KPTEIYNLGAQSHV-----KISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQAST  156 (375)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred             CCHHHHHHHHHhc-----CCCEEEECCCcccc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCC--ccceEEEecc
Confidence            9999999988765     69999999997431     1234667889999999999999998775431  2379999998


Q ss_pred             CCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ......          +......|+.||++.+.+++.++.++   |+.+..+.|+.+-.|
T Consensus       157 ~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          157 SELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  213 (375)
T ss_dssp             GGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             hhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence            632211          12245689999999999999999876   578877887665443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.79  E-value=2.7e-18  Score=151.93  Aligned_cols=192  Identities=13%  Similarity=0.146  Sum_probs=126.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|+||++++++|+++|++|++++|+.+++++.                       . ..+.++.+|++|.++ 
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----------------------~-~~~~~~~~D~~d~~~-   56 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-----------------------H-KDINILQKDIFDLTL-   56 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-----------------------C-SSSEEEECCGGGCCH-
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-----------------------c-CCCeEEeccccChhh-
Confidence            599999999999999999999999999999998765432                       1 357789999999887 


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                              +.+.++|+||||||...  .            ..++|+.+    ++.+++.+++. +.+++|++||.+ +..
T Consensus        57 --------~~~~~~d~vi~~ag~~~--~------------~~~~~~~~----~~~l~~a~~~~-~~~~~v~~SS~~-~~~  108 (221)
T 3ew7_A           57 --------SDLSDQNVVVDAYGISP--D------------EAEKHVTS----LDHLISVLNGT-VSPRLLVVGGAA-SLQ  108 (221)
T ss_dssp             --------HHHTTCSEEEECCCSST--T------------TTTSHHHH----HHHHHHHHCSC-CSSEEEEECCCC----
T ss_pred             --------hhhcCCCEEEECCcCCc--c------------ccchHHHH----HHHHHHHHHhc-CCceEEEEecce-EEE
Confidence                    12357999999999843  1            02334444    45556677765 578999999873 322


Q ss_pred             CCC------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-chhhh----hhhhcC
Q 017635          195 STP------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQM----FNIICE  257 (368)
Q Consensus       195 ~~~------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~----~~~~~~  257 (368)
                      +.+            ....|+.+|.+.+.+. .+..  ...|++++.++||.+.++........ ....+    ......
T Consensus       109 ~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i  185 (221)
T 3ew7_A          109 IDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIGKDHLLFGSDGNSFI  185 (221)
T ss_dssp             ----------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC---------------------CC
T ss_pred             cCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCceEeccccceecCCCCceE
Confidence            221            2356999999988863 3332  15689999999999988722111000 00000    001123


Q ss_pred             CHHHHHHHhhhhhhhcccccceeee
Q 017635          258 LPETVARTLVPRIRVVKGSGKAINY  282 (368)
Q Consensus       258 ~pe~~a~~~~~~~~~~~~~~~~~~~  282 (368)
                      .++++|+.++..+..++..++....
T Consensus       186 ~~~Dva~~~~~~l~~~~~~g~~~~~  210 (221)
T 3ew7_A          186 SMEDYAIAVLDEIERPNHLNEHFTV  210 (221)
T ss_dssp             CHHHHHHHHHHHHHSCSCTTSEEEC
T ss_pred             eHHHHHHHHHHHHhCccccCCEEEE
Confidence            6889999888888776655554433

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.79  E-value=1.7e-19  Score=168.32  Aligned_cols=162  Identities=17%  Similarity=0.121  Sum_probs=127.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++||||||+|+||++++++|+++|++|++++|+.+...+.                       ....+.++.+|++|.+ 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------------~~~~~~~~~~Dl~d~~-   56 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-----------------------VNPSAELHVRDLKDYS-   56 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-----------------------SCTTSEEECCCTTSTT-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-----------------------cCCCceEEECccccHH-
Confidence            4799999999999999999999999999999976542211                       1245788999999987 


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.++++       . |+||||||...     .+.+.++++..+++|+.++.++++++...     +.++||++||.....
T Consensus        57 ~~~~~~-------~-d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~~~iv~~SS~~vyg  118 (312)
T 3ko8_A           57 WGAGIK-------G-DVVFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT-----GVRTVVFASSSTVYG  118 (312)
T ss_dssp             TTTTCC-------C-SEEEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGC
T ss_pred             HHhhcC-------C-CEEEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeCcHHHhC
Confidence            654432       3 99999999643     13345567889999999999999987543     456999999863221


Q ss_pred             ----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          194 ----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       194 ----------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                                .+......|+.||.+.+.+++.++.++   |++++.++||.+.+|..
T Consensus       119 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~  172 (312)
T 3ko8_A          119 DADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRL  172 (312)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred             CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCC
Confidence                      122345789999999999999999887   79999999999998864

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.79  E-value=2.1e-19  Score=171.69  Aligned_cols=177  Identities=21%  Similarity=0.167  Sum_probs=124.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHH--CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLL--SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~--~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      |++++|+||||||+|+||++++++|++  +|++|++++|+........... +.         ........+.++.++.+
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~   75 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRP-SS---------LGHFKNLIGFKGEVIAA   75 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------C-CC---------CCCGGGGTTCCSEEEEC
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccch-hh---------hhhhhhccccCceEEEC
Confidence            567899999999999999999999999  9999999999765211000000 00         00001112346788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++      ...++|+||||||... .      +.++++..+++|+.|+.++++++..    .  +++||++
T Consensus        76 Dl~d~~~~~~~------~~~~~D~vih~A~~~~-~------~~~~~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~  136 (362)
T 3sxp_A           76 DINNPLDLRRL------EKLHFDYLFHQAAVSD-T------TMLNQELVMKTNYQAFLNLLEIARS----K--KAKVIYA  136 (362)
T ss_dssp             CTTCHHHHHHH------TTSCCSEEEECCCCCG-G------GCCCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEE
T ss_pred             CCCCHHHHHHh------hccCCCEEEECCccCC-c------cccCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEe
Confidence            99999998876      2358999999999643 1      3345788999999999999988743    2  3459999


Q ss_pred             cCCCCCCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          187 DGAGSGGS---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       187 sS~~~~~~---------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ||......         +......|+.||.+.+.+++.++.+     +++..++|+.+-.|.
T Consensus       137 SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~  193 (362)
T 3sxp_A          137 SSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPR  193 (362)
T ss_dssp             EEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTT
T ss_pred             CcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcC
Confidence            98532111         1122356999999999999988765     566667776665443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.79  E-value=3e-19  Score=167.33  Aligned_cols=173  Identities=16%  Similarity=0.157  Sum_probs=120.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC-ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASR-SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ||+||||||+|+||++++++|+++|++|+++.| +.+..+.. ..+.+ ...             ...++.++.+|++|.
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~-------------~~~~~~~~~~Dl~d~   65 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTN-LPG-------------ASEKLHFFNADLSNP   65 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHT-STT-------------HHHHEEECCCCTTCG
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHh-hhc-------------cCCceEEEecCCCCH
Confidence            589999999999999999999999999999998 65321110 11110 000             013577889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHH-HHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE-IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      ++++++++       .+|+|||||+...       .+.++ .++.+++|+.|++++++++.+.    .+.++||++||..
T Consensus        66 ~~~~~~~~-------~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~gt~~l~~aa~~~----~~~~~iV~~SS~~  127 (322)
T 2p4h_X           66 DSFAAAIE-------GCVGIFHTASPID-------FAVSEPEEIVTKRTVDGALGILKACVNS----KTVKRFIYTSSGS  127 (322)
T ss_dssp             GGGHHHHT-------TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTC----SSCCEEEEEEEGG
T ss_pred             HHHHHHHc-------CCCEEEEcCCccc-------CCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccHH
Confidence            98887764       5799999996421       12222 4568999999999999987653    1357999999863


Q ss_pred             CCC-CCC--------------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          191 SGG-SST--------------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       191 ~~~-~~~--------------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +.. .+.                    |....|+.||.+.+.+++.++.+   .|++++.++||.|.+|+..
T Consensus       128 ~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          128 AVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             GTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCS
T ss_pred             HcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCC
Confidence            211 110                    01116999999888777666543   4899999999999998653

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.79  E-value=6.9e-19  Score=166.76  Aligned_cols=177  Identities=12%  Similarity=0.108  Sum_probs=127.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      |++++++||||||+|+||.+++++|+++|  ++|+..+|......  ...+...               ....++.++.+
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~---------------~~~~~~~~~~~   82 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSI---------------QDHPNYYFVKG   82 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTT---------------TTCTTEEEEEC
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhh---------------ccCCCeEEEEc
Confidence            45678899999999999999999999999  67888877642110  0011000               01246889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++..     ++|+|||+||....     ..+.++.+..+++|+.++.++++++...     +.+++|++
T Consensus        83 Dl~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~~~~~v~~  147 (346)
T 4egb_A           83 EIQNGELLEHVIKER-----DVQVIVNFAAESHV-----DRSIENPIPFYDTNVIGTVTLLELVKKY-----PHIKLVQV  147 (346)
T ss_dssp             CTTCHHHHHHHHHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS-----TTSEEEEE
T ss_pred             CCCCHHHHHHHHhhc-----CCCEEEECCcccch-----hhhhhCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEe
Confidence            999999999988763     69999999997541     2244667889999999999998887542     45789999


Q ss_pred             cCCCCCCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          187 DGAGSGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       187 sS~~~~~~~-----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ||.......           ......|+.+|.+.+.+++.++.+.   |++++.++||.+-.|..
T Consensus       148 SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          148 STDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             EEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             CchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCC
Confidence            986322111           1224689999999999999998875   79999999999987653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.78  E-value=1.4e-18  Score=163.83  Aligned_cols=174  Identities=14%  Similarity=0.019  Sum_probs=128.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .-.+++||||||+|+||++++++|+++|++|++++|+.++.. ...+.+.                  ...++.++.+|+
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl   72 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG------------------IEGDIQYEDGDM   72 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT------------------CGGGEEEEECCT
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc------------------ccCceEEEECCC
Confidence            345789999999999999999999999999999999865421 1111110                  124678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+     ++|+||||||....     ..+.++++..+++|+.++.++++++.+.    +..+++|++||
T Consensus        73 ~d~~~~~~~~~~~-----~~d~Vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS  138 (335)
T 1rpn_A           73 ADACSVQRAVIKA-----QPQEVYNLAAQSFV-----GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQAST  138 (335)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEE
T ss_pred             CCHHHHHHHHHHc-----CCCEEEECccccch-----hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeC
Confidence            9999999888765     69999999997431     1112346789999999999999988654    11379999998


Q ss_pred             CCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ......          +......|+.||.+.+.+++.++.++   |+++..+.|+.+-.|
T Consensus       139 ~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          139 SEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESP  195 (335)
T ss_dssp             GGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECT
T ss_pred             HHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCC
Confidence            632111          11224589999999999999998876   688888888877554

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.78  E-value=6e-19  Score=172.37  Aligned_cols=177  Identities=16%  Similarity=0.140  Sum_probs=127.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      +.++|+||||||+|+||++++++|+++|++|++++|+.+   ..+.+.+.+.........        .....++.++.+
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~--------~~~~~~v~~v~~  137 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETV--------EMMLSNIEVIVG  137 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHH--------HHHHTTEEEEEE
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcccccc--------ccccCceEEEeC
Confidence            456789999999999999999999999999999999876   333444444322100000        001357889999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.+++.        .++++|+||||||...        ..++++..+++|+.++.++++++.+      +..++|++
T Consensus       138 Dl~d~~~l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~------~~~~~v~~  195 (427)
T 4f6c_A          138 DFECMDDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYV  195 (427)
T ss_dssp             CC---CCCC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH------TTCEEEEE
T ss_pred             CCCCcccCC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh------cCCcEEEE
Confidence            999988877        4578999999999753        2246788999999999999999876      25789999


Q ss_pred             cCCCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          187 DGAGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       187 sS~~~~~~-----------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ||...+..                 +......|+.||.+.+.+++.++.    .|++++.++||.|-++..
T Consensus       196 SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~  262 (427)
T 4f6c_A          196 STISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYN  262 (427)
T ss_dssp             EEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSS
T ss_pred             CchHhCCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCC
Confidence            98744110                 022567999999999999998764    589999999999987754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.78  E-value=9e-19  Score=163.73  Aligned_cols=161  Identities=16%  Similarity=0.162  Sum_probs=123.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+||||||+|+||++++++|+++|+.|++..|+....+.                        ....+.++.+|++| ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~------------------------~~~~~~~~~~Dl~~-~~   56 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF------------------------VNEAARLVKADLAA-DD   56 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG------------------------SCTTEEEECCCTTT-SC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh------------------------cCCCcEEEECcCCh-HH
Confidence            589999999999999999999999555544444332110                        12457889999999 88


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.++++       ++|++||+|+...     .+.+.++++..+++|+.++.++++++..    . +.++||++||.....
T Consensus        57 ~~~~~~-------~~d~vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~-~~~~iv~~SS~~vyg  119 (313)
T 3ehe_A           57 IKDYLK-------GAEEVWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRK----A-GVSRIVFTSTSTVYG  119 (313)
T ss_dssp             CHHHHT-------TCSEEEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEECCGGGGC
T ss_pred             HHHHhc-------CCCEEEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEeCchHHhC
Confidence            777664       6999999999643     2334456788999999999999887543    2 457999999863221


Q ss_pred             ----------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          194 ----------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       194 ----------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                                .+......|+.||.+.+.+++.++.++   |++++.++||.+-.+.
T Consensus       120 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~  172 (313)
T 3ehe_A          120 EAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRR  172 (313)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTT
T ss_pred             cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcC
Confidence                      133445789999999999999999886   7999999999998764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.78  E-value=1.9e-18  Score=162.55  Aligned_cols=165  Identities=16%  Similarity=0.107  Sum_probs=128.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+|+||||+|+||++++++|+++|++|++++|+.....   +.                    ...++.++.+|++|.++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~--------------------~~~~~~~~~~D~~~~~~   58 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA--------------------ITEGAKFYNGDLRDKAF   58 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG--------------------SCTTSEEEECCTTCHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh--------------------cCCCcEEEECCCCCHHH
Confidence            68999999999999999999999999999998754321   00                    11257789999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +++++++     .++|+|||+||.... .    .+.++++..+++|+.++.++++++..    . +.+++|++||.....
T Consensus        59 ~~~~~~~-----~~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~~~~  123 (330)
T 2c20_A           59 LRDVFTQ-----ENIEAVMHFAADSLV-G----VSMEKPLQYYNNNVYGALCLLEVMDE----F-KVDKFIFSSTAATYG  123 (330)
T ss_dssp             HHHHHHH-----SCEEEEEECCCCCCH-H----HHHHSHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGGGGC
T ss_pred             HHHHHhh-----cCCCEEEECCcccCc-c----ccccCHHHHHHHHhHHHHHHHHHHHH----c-CCCEEEEeCCceeeC
Confidence            9888764     379999999997531 1    13456788999999999999887643    3 457999999863221


Q ss_pred             C----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          194 S----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       194 ~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .          +......|+.+|.+.+.+++.++.++   |++++.++||.+-.+.
T Consensus       124 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          124 EVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             SCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             CCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            1          11235789999999999999998765   7999999999887663

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.78  E-value=1.2e-18  Score=164.56  Aligned_cols=162  Identities=20%  Similarity=0.185  Sum_probs=119.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++++|+||||+|+||++++++|+++|++|++++|+.....+.   +.                  .-.++.++.+|++
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~------------------~~~~~~~~~~Dl~   76 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LK------------------DHPNLTFVEGSIA   76 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SC------------------CCTTEEEEECCTT
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hh------------------hcCCceEEEEeCC
Confidence            45789999999999999999999999999999999975421100   00                  0035788999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++.     +++|+||||||.... .     +.++++  +++|+.++.++++++.+    . +.++||++||.
T Consensus        77 d~~~~~~~~~~-----~~~D~vih~A~~~~~-~-----~~~~~~--~~~N~~~~~~l~~a~~~----~-~~~~iV~~SS~  138 (333)
T 2q1w_A           77 DHALVNQLIGD-----LQPDAVVHTAASYKD-P-----DDWYND--TLTNCVGGSNVVQAAKK----N-NVGRFVYFQTA  138 (333)
T ss_dssp             CHHHHHHHHHH-----HCCSEEEECCCCCSC-T-----TCHHHH--HHHHTHHHHHHHHHHHH----T-TCSEEEEEEEG
T ss_pred             CHHHHHHHHhc-----cCCcEEEECceecCC-C-----ccCChH--HHHHHHHHHHHHHHHHH----h-CCCEEEEECcH
Confidence            99999888765     279999999997541 1     334445  99999999999998876    2 45799999986


Q ss_pred             CCCC----CC--------CCCchhhHHHHHHHHHHHHH-HHHHhCCCCeEEEEEecCcccCc
Q 017635          190 GSGG----SS--------TPLTAVYGSTKCGLRQLQAS-LFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       190 ~~~~----~~--------~~~~~~Y~aSKaal~~l~~~-la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ....    ..        .|....|+.+|++.+.+++. ++        ++..++|+.+-.|
T Consensus       139 ~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp  192 (333)
T 2q1w_A          139 LCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGP  192 (333)
T ss_dssp             GGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEEST
T ss_pred             HHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECc
Confidence            3322    11        22227899999999999987 54        4566777665544

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.78  E-value=2.7e-18  Score=165.00  Aligned_cols=173  Identities=14%  Similarity=0.060  Sum_probs=131.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .+++++++|+||||+|+||++++++|+++| ++|++++|+..+..+   .+.                  ...++.++.+
T Consensus        27 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~------------------~~~~v~~~~~   85 (377)
T 2q1s_A           27 ASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP------------------DHPAVRFSET   85 (377)
T ss_dssp             CGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC------------------CCTTEEEECS
T ss_pred             hHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc------------------CCCceEEEEC
Confidence            345778999999999999999999999999 999999998643210   000                  1246788999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|.++++++++       ++|+|||+||....     ..+.++.+..+++|+.++.++++++.    +.++.+++|++
T Consensus        86 Dl~d~~~l~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~  149 (377)
T 2q1s_A           86 SITDDALLASLQD-------EYDYVFHLATYHGN-----QSSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYS  149 (377)
T ss_dssp             CTTCHHHHHHCCS-------CCSEEEECCCCSCH-----HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEE
T ss_pred             CCCCHHHHHHHhh-------CCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEe
Confidence            9999988876653       79999999997531     12345678899999999999988763    22134689999


Q ss_pred             cCCCCCC----------C-----CC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          187 DGAGSGG----------S-----ST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       187 sS~~~~~----------~-----~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ||.....          .     +. .....|+.+|.+.+.+++.++.+.   |++++.++||.+-++..
T Consensus       150 SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          150 AAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             EEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             CCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            9863211          1     22 345689999999999999998876   79999999999987754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.78  E-value=1.3e-18  Score=164.26  Aligned_cols=168  Identities=14%  Similarity=0.177  Sum_probs=128.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC---C---CeEEEEeCChHHH-HHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           35 NVVITGSTRGLGKALAREFLLS---G---DRVVVASRSSESV-RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~---G---~~Vil~~R~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +|+||||+|+||++++++|+++   |   ++|++++|+.... .+..+++.                  ...++.++.+|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~D   63 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD------------------ADPRLRFVHGD   63 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT------------------TCTTEEEEECC
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc------------------cCCCeEEEEcC
Confidence            6999999999999999999997   8   9999999864210 00000110                  12467889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.+++++++       .++|+||||||....     +.+.++++..+++|+.++.++++++.+.     +.++||++|
T Consensus        64 l~d~~~~~~~~-------~~~d~Vih~A~~~~~-----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~-----~~~~~v~~S  126 (337)
T 1r6d_A           64 IRDAGLLAREL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVDA-----GVGRVVHVS  126 (337)
T ss_dssp             TTCHHHHHHHT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHT-----TCCEEEEEE
T ss_pred             CCCHHHHHHHh-------cCCCEEEECCCccCc-----hhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEec
Confidence            99999887765       479999999997431     1234556789999999999999988764     346999999


Q ss_pred             CCCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          188 GAGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       188 S~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      |......          +......|+.||.+.+.+++.++.++   |++++.++||.+.++..
T Consensus       127 S~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          127 TNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             EGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             chHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence            8632111          23345789999999999999998876   79999999999988764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.77  E-value=2.6e-19  Score=158.03  Aligned_cols=151  Identities=17%  Similarity=0.202  Sum_probs=119.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++++||||+|+||++++++|+++|+  +|++++|+.++                           ...++.++.+|++
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------------------------~~~~~~~~~~D~~   56 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPRLDNPVGPLA   56 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTTEECCBSCHH
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------------------------cCCCceEEecccc
Confidence            468999999999999999999999998  99999998654                           0134677889998


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.+++++++         +|+||||||....       +.+++++.+++|+.++..+++++.+    . +.+++|++||.
T Consensus        57 ~~~~~~~~~---------~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~Ss~  115 (215)
T 2a35_A           57 ELLPQLDGS---------IDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSAL  115 (215)
T ss_dssp             HHGGGCCSC---------CSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCT
T ss_pred             CHHHHHHhh---------hcEEEECeeeccc-------cCCCHHHHHHhhHHHHHHHHHHHHH----c-CCCEEEEECCc
Confidence            887665543         8999999997431       2345788899999999999888754    2 45789999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeE-EEEEecCcccCccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVG-VHTASPGMVLTDLL  240 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~-v~~v~PG~v~T~~~  240 (368)
                      . ...  +....|+.+|.+++.+++.       .|++ ++.++||++.++..
T Consensus       116 ~-~~~--~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~v~g~~~  157 (215)
T 2a35_A          116 G-ADA--KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSLLFGPRE  157 (215)
T ss_dssp             T-CCT--TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCSEESTTS
T ss_pred             c-cCC--CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCceeeCCCC
Confidence            3 222  2346899999999988764       3798 99999999988753

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.77  E-value=5.6e-18  Score=175.58  Aligned_cols=177  Identities=18%  Similarity=0.200  Sum_probs=129.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +++++|+||||||+|+||++++++|+++|++|++++|+.....+..+++...                ...++.++.+|+
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~----------------~~~~v~~v~~Dl   70 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEVDL   70 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEECCT
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc----------------cCCceEEEEcCC
Confidence            4567899999999999999999999999999999999765433333333221                124577899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++..     ++|+||||||... ...    ..+..++.+++|+.++.++++++..    . +.++||++||
T Consensus        71 ~d~~~l~~~~~~~-----~~D~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~----~-~~~~iV~~SS  135 (699)
T 1z45_A           71 CDRKGLEKVFKEY-----KIDSVIHFAGLKA-VGE----STQIPLRYYHNNILGTVVLLELMQQ----Y-NVSKFVFSSS  135 (699)
T ss_dssp             TCHHHHHHHHHHS-----CCCEEEECCSCCC-HHH----HHHSHHHHHHHHHHHHHHHHHHHHH----H-TCCEEEEEEE
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCcccC-cCc----cccCHHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEECc
Confidence            9999998887643     6999999999753 111    1233466899999999999776543    2 3579999998


Q ss_pred             CCCCCC--------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          189 AGSGGS--------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       189 ~~~~~~--------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                      ......              +......|+.||++++.+++.++.+. +.|+++..++|+.+-.
T Consensus       136 ~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG  197 (699)
T 1z45_A          136 ATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG  197 (699)
T ss_dssp             GGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred             HHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccC
Confidence            632111              11234689999999999999998775 4589999999987654

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.76  E-value=2.8e-18  Score=159.98  Aligned_cols=163  Identities=12%  Similarity=0.046  Sum_probs=127.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|+++||||+|+||.+++++|+++  |++|++++|+..+.+     +.                    .++.++.+|++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~--------------------~~~~~~~~D~~d   56 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV--------------------NSGPFEVVNALD   56 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH--------------------HSSCEEECCTTC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc--------------------CCCceEEecCCC
Confidence            478999999999999999999999  899999999865421     11                    135678999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+++++++++.     ++|+|||+||....      ...++.+..+++|+.++.++++++.+    . +.+++|++||..
T Consensus        57 ~~~~~~~~~~~-----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~  120 (312)
T 2yy7_A           57 FNQIEHLVEVH-----KITDIYLMAALLSA------TAEKNPAFAWDLNMNSLFHVLNLAKA----K-KIKKIFWPSSIA  120 (312)
T ss_dssp             HHHHHHHHHHT-----TCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHT----T-SCSEEECCEEGG
T ss_pred             HHHHHHHHhhc-----CCCEEEECCccCCC------chhhChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEeccHH
Confidence            99998887643     69999999997431      12356788999999999999888753    2 456999999863


Q ss_pred             CCCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          191 SGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       191 ~~~~~-----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .....           ......|+.+|.+.+.+++.++.++   |++++.++||.+-.+.
T Consensus       121 ~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          121 VFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             GCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred             HhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence            22111           1235689999999999999998776   7999999999887753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.76  E-value=4.8e-19  Score=167.30  Aligned_cols=171  Identities=13%  Similarity=0.167  Sum_probs=122.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH--HHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT--VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|+||||||+|+||++++++|+++|++|+++.|+.++.++.  ..++.                  ...++.++.+|++|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~~Dl~d   70 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ------------------ELGDLKIFRADLTD   70 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG------------------GGSCEEEEECCTTT
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC------------------CCCcEEEEecCCCC
Confidence            68999999999999999999999999999999986543211  11111                  11357789999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++++++++       ++|+|||+|+... .   .  ..+..++.+++|+.|+.++++++.+..    +.++||++||..
T Consensus        71 ~~~~~~~~~-------~~D~Vih~A~~~~-~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~----~v~r~V~~SS~~  133 (338)
T 2rh8_A           71 ELSFEAPIA-------GCDFVFHVATPVH-F---A--SEDPENDMIKPAIQGVVNVMKACTRAK----SVKRVILTSSAA  133 (338)
T ss_dssp             SSSSHHHHT-------TCSEEEEESSCCC-C--------------CHHHHHHHHHHHHHHHHCT----TCCEEEEECCHH
T ss_pred             hHHHHHHHc-------CCCEEEEeCCccC-C---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC----CcCEEEEEecHH
Confidence            888877654       5899999998542 1   1  112224589999999999999886532    257999999863


Q ss_pred             CC-----CC---CC------------C---CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccc
Q 017635          191 SG-----GS---ST------------P---LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLL  241 (368)
Q Consensus       191 ~~-----~~---~~------------~---~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~  241 (368)
                      +.     ..   +.            +   ....|+.||.+.+.+++.++.+.   |+++++++||.|.+|...
T Consensus       134 ~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~  204 (338)
T 2rh8_A          134 AVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLT  204 (338)
T ss_dssp             HHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSS
T ss_pred             HeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence            10     00   00            0   11259999999999888877653   799999999999988643

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.75  E-value=1.8e-18  Score=164.74  Aligned_cols=167  Identities=13%  Similarity=0.133  Sum_probs=124.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++++|+||||+|+||++++++|+++| ++|++++|+.....  ...+                   .  .+. +.+|+
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~-------------------~--~~~-~~~d~   98 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL-------------------V--DLN-IADYM   98 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT-------------------T--TSC-CSEEE
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc-------------------c--Cce-Eeeec
Confidence            4567899999999999999999999999 99999999765321  0000                   0  122 67899


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+.++++++.  ..++++|+|||+||....       +.++++..+++|+.++.++++++.+.     +. ++|++||
T Consensus        99 ~~~~~~~~~~~~--~~~~~~d~Vih~A~~~~~-------~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~-r~V~~SS  163 (357)
T 2x6t_A           99 DKEDFLIQIMAG--EEFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASS  163 (357)
T ss_dssp             EHHHHHHHHHTT--CCCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEE
T ss_pred             CcHHHHHHHHhh--cccCCCCEEEECCcccCC-------ccCCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEcc
Confidence            999888877653  235689999999997541       22346789999999999999988763     34 8999998


Q ss_pred             CCCCCCCCC-----------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          189 AGSGGSSTP-----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       189 ~~~~~~~~~-----------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ... ....+           ....|+.+|.+.+.+++.++.++   |++++.++||.|-++.
T Consensus       164 ~~v-~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          164 AAT-YGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             GGG-GCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESSS
T ss_pred             hHH-hCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEecCeEECCC
Confidence            632 22111           25689999999999999988764   7999999999998764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.75  E-value=5.3e-18  Score=162.32  Aligned_cols=166  Identities=12%  Similarity=0.072  Sum_probs=128.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|+|+||||+|+||.+++++|+++ |++|++++|+.++.....                      ...++.++.+|+
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------------------~~~~v~~~~~Dl   78 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV----------------------KHERMHFFEGDI   78 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG----------------------GSTTEEEEECCT
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc----------------------cCCCeEEEeCcc
Confidence            456789999999999999999999998 999999999876533211                      124688999999


Q ss_pred             C-CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 C-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~-~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      + |.++++++++       ++|+|||+||...+     ....++.+..+++|+.++.++++++...     + .++|++|
T Consensus        79 ~~d~~~~~~~~~-------~~d~Vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~a~~~~-----~-~~~v~~S  140 (372)
T 3slg_A           79 TINKEWVEYHVK-------KCDVILPLVAIATP-----ATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPS  140 (372)
T ss_dssp             TTCHHHHHHHHH-------HCSEEEECBCCCCH-----HHHHHCHHHHHHHHTTTTHHHHHHHHHH-----T-CEEEEEC
T ss_pred             CCCHHHHHHHhc-------cCCEEEEcCccccH-----HHHhhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEeC
Confidence            9 9999888776       48999999997541     1123456788999999999998877543     3 7899999


Q ss_pred             CCCCCCC----CC-------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          188 GAGSGGS----ST-------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       188 S~~~~~~----~~-------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      |......    +.             .....|+.+|.+.+.+++.++.+    |++++.++|+.+-.+.
T Consensus       141 S~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~  205 (372)
T 3slg_A          141 TSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPG  205 (372)
T ss_dssp             CGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSS
T ss_pred             cHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCC
Confidence            8632111    00             23347999999999999988765    7999999999987664

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.74  E-value=1e-17  Score=158.30  Aligned_cols=163  Identities=11%  Similarity=0.041  Sum_probs=123.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH-
Q 017635           34 RNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP-  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-  111 (368)
                      ++|+||||+|+||++++++|+++ |++|++++|+.++.+...                      ...++.++.+|++|. 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~----------------------~~~~~~~~~~D~~~~~   58 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISIHS   58 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------------------TCTTEEEEECCTTTCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh----------------------cCCCeEEEeccccCcH
Confidence            47999999999999999999998 899999999876542110                      123578899999984 


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +.++++++       ++|+|||+||...+ .    ...++.+..+++|+.++.++++++.+    . + +++|++||...
T Consensus        59 ~~~~~~~~-------~~d~vih~A~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~-~~~v~~SS~~v  120 (345)
T 2bll_A           59 EWIEYHVK-------KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPSTSEV  120 (345)
T ss_dssp             HHHHHHHH-------HCSEEEECBCCCCH-H----HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECCGGG
T ss_pred             HHHHhhcc-------CCCEEEEcccccCc-c----chhcCHHHHHHHHHHHHHHHHHHHHH----h-C-CeEEEEecHHH
Confidence            56666654       47999999997541 1    12345678999999999998887754    3 3 79999998632


Q ss_pred             CCCC--C---------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          192 GGSS--T---------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       192 ~~~~--~---------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ....  .               .....|+.+|.+.+.+++.++.+.   |++++.++||.+-.+.
T Consensus       121 ~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  182 (345)
T 2bll_A          121 YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPR  182 (345)
T ss_dssp             GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSS
T ss_pred             cCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCC
Confidence            1110  0               122379999999999999998776   7999999999997765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.74  E-value=7.1e-18  Score=157.66  Aligned_cols=154  Identities=17%  Similarity=0.145  Sum_probs=93.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+|+||||+|+||++++++|+++|++|++++|+.++         .                    .  ++.+|++|.+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~--------------------~--~~~~Dl~d~~   50 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------P--------------------K--FEQVNLLDSN   50 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------------------------
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------C--------------------C--eEEecCCCHH
Confidence            5789999999999999999999999999999986532         0                    1  4678999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++..     ++|+||||||....     +.+.+++++.+++|+.++.++++++.+.      ++++|++||... 
T Consensus        51 ~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v-  113 (315)
T 2ydy_A           51 AVHHIIHDF-----QPHVIVHCAAERRP-----DVVENQPDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYV-  113 (315)
T ss_dssp             -CHHHHHHH-----CCSEEEECC------------------------CHHHHHHHHHHHHH------TCEEEEEEEGGG-
T ss_pred             HHHHHHHhh-----CCCEEEECCcccCh-----hhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHH-
Confidence            998887754     69999999997541     2345678899999999999999998763      249999998732 


Q ss_pred             CCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccC
Q 017635          193 GSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLT  237 (368)
Q Consensus       193 ~~~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T  237 (368)
                      ..+          ......|+.+|.+.+.+++.++.++  ..+|++.|. |+..+
T Consensus       114 ~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~  165 (315)
T 2ydy_A          114 FDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEK  165 (315)
T ss_dssp             SCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSS
T ss_pred             cCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCc
Confidence            222          2345789999999999999875432  235555555 54444

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.73  E-value=3.2e-17  Score=153.28  Aligned_cols=155  Identities=16%  Similarity=0.182  Sum_probs=120.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +||||||+|+||++++++|+++  |++|++++|+..+.                            ..+.++.+|++|.+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~----------------------------~~~~~~~~D~~d~~   52 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT----------------------------GGIKFITLDVSNRD   52 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC----------------------------TTCCEEECCTTCHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc----------------------------cCceEEEecCCCHH
Confidence            4899999999999999999998  89999999875421                            12457899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++.     .++|+|||+||....      ...++.+..+++|+.++.++++++.+    . +.+++|++||....
T Consensus        53 ~~~~~~~~-----~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~-~~~~~v~~SS~~~~  116 (317)
T 3ajr_A           53 EIDRAVEK-----YSIDAIFHLAGILSA------KGEKDPALAYKVNMNGTYNILEAAKQ----H-RVEKVVIPSTIGVF  116 (317)
T ss_dssp             HHHHHHHH-----TTCCEEEECCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGC
T ss_pred             HHHHHHhh-----cCCcEEEECCcccCC------ccccChHHHhhhhhHHHHHHHHHHHH----c-CCCEEEEecCHHHh
Confidence            99888764     269999999997431      12355788999999999999888754    2 45799999987432


Q ss_pred             CCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          193 GSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       193 ~~~-----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                      ...           ......|+.||.+.+.+++.++.+.   |++++.++|+.+-
T Consensus       117 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~  168 (317)
T 3ajr_A          117 GPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGII  168 (317)
T ss_dssp             CTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEE
T ss_pred             CCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEe
Confidence            211           1135789999999999999888765   7999999865543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.72  E-value=1.5e-17  Score=157.44  Aligned_cols=168  Identities=18%  Similarity=0.180  Sum_probs=122.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++++|+||||+|+||++++++|+++|++|++++|+.....+...++.                  ...++.++.+|+
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~~~~D~   84 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI------------------GHENFELINHDV   84 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT------------------TCTTEEEEECCT
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc------------------cCCceEEEeCcc
Confidence            34678999999999999999999999999999999997432111000000                  124578899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      .+..            +.++|+|||+||.... ...    .++.+..+++|+.++.++++++.+.     + .++|++||
T Consensus        85 ~~~~------------~~~~d~vih~A~~~~~-~~~----~~~~~~~~~~n~~~~~~l~~a~~~~-----~-~~~v~~SS  141 (343)
T 2b69_A           85 VEPL------------YIEVDQIYHLASPASP-PNY----MYNPIKTLKTNTIGTLNMLGLAKRV-----G-ARLLLAST  141 (343)
T ss_dssp             TSCC------------CCCCSEEEECCSCCSH-HHH----TTCHHHHHHHHHHHHHHHHHHHHHH-----T-CEEEEEEE
T ss_pred             CChh------------hcCCCEEEECccccCc-hhh----hhCHHHHHHHHHHHHHHHHHHHHHh-----C-CcEEEECc
Confidence            8752            4579999999997531 111    1235678999999999999887653     2 48999998


Q ss_pred             CCCCC---------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGG---------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~---------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .....               .+......|+.+|.+.+.+++.++.+.   |++++.++||.+-.+..
T Consensus       142 ~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  205 (343)
T 2b69_A          142 SEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  205 (343)
T ss_dssp             GGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             HHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence            63211               122335679999999999999998775   79999999999987753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.71  E-value=1.1e-16  Score=149.79  Aligned_cols=154  Identities=15%  Similarity=0.116  Sum_probs=121.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++|+||||+|+||++++++|+++|++|++++|+.                                     .+|++|.+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------------------------~~D~~d~~   45 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDSR   45 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------------------------cCCccCHH
Confidence            47899999999999999999999999999887752                                     25999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++..     ++|+|||+||....    .....++.+..+++|+.++.++++++.+    . +.+++|++||....
T Consensus        46 ~~~~~~~~~-----~~d~vih~a~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~~~v~~SS~~vy  111 (321)
T 1e6u_A           46 AVHDFFASE-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQ----N-DVNKLLFLGSSCIY  111 (321)
T ss_dssp             HHHHHHHHH-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEECCGGGS
T ss_pred             HHHHHHHhc-----CCCEEEEcCeecCC----cchhhhCHHHHHHHHHHHHHHHHHHHHH----h-CCCeEEEEccHHHc
Confidence            998887654     69999999997431    1123345678899999999999888754    2 35699999986332


Q ss_pred             CC---------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          193 GS---------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       193 ~~---------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ..               ..|....|+.+|.+.+.+++.++.+.   |++++.++||.+-.+..
T Consensus       112 g~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          112 PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             CTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             CCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence            11               11223589999999999999998776   79999999999987643

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.71  E-value=5.6e-17  Score=160.77  Aligned_cols=184  Identities=21%  Similarity=0.254  Sum_probs=128.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHC---CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLS---GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~---G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      ...++|+|+||||+|+||.+++++|+++   |++|++++|+.+... ..+++.+.......... .........++.++.
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~-~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELL-RHFKELAADRLEVVA  146 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHH-HHHHHHHTTTEEEEE
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhh-hhhhhhccCceEEEE
Confidence            3467899999999999999999999999   999999999876542 22333222110000000 000000125789999


Q ss_pred             ccCC------CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC
Q 017635          106 CDVC------EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK  179 (368)
Q Consensus       106 ~Dv~------~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~  179 (368)
                      +|++      |.++++++++       ++|+||||||... .        +.++..+++|+.|+.++++++..    . +
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~-~--------~~~~~~~~~Nv~gt~~ll~aa~~----~-~  205 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVN-A--------FPYHELFGPNVAGTAELIRIALT----T-K  205 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCS-B--------SSCCEEHHHHHHHHHHHHHHHTS----S-S
T ss_pred             eECCCcccCCCHHHHHHHHc-------CCCEEEECccccC-C--------cCHHHHHHHHHHHHHHHHHHHHh----C-C
Confidence            9998      6666766654       4899999999864 2        22346789999999999887643    2 3


Q ss_pred             CcEEEEEcCCCCCCCCCC---------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          180 GGHIFNMDGAGSGGSSTP---------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~---------------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .+++|++||........+                     ....|+.||.+.+.+++.++.+.   |++++.++||.|-.+
T Consensus       206 ~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          206 LKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD  282 (478)
T ss_dssp             CCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred             CCeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence            468999998632221111                     01349999999999999998765   799999999999754

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.70  E-value=8e-17  Score=147.21  Aligned_cols=144  Identities=17%  Similarity=0.081  Sum_probs=111.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+|+||++++++|+ +|++|++++|+.+.                           . ..   +.+|++|++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~---------------------------~-~~---~~~Dl~~~~~~   49 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI---------------------------Q-GG---YKLDLTDFPRL   49 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC---------------------------T-TC---EECCTTSHHHH
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC---------------------------C-CC---ceeccCCHHHH
Confidence            69999999999999999999 58999999998631                           0 01   78999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++.+     ++|+||||||....     +.+.+++++.+++|+.++.++++++.+    .  ++++|++||.. ...
T Consensus        50 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~-~~~  112 (273)
T 2ggs_A           50 EDFIIKK-----RPDVIINAAAMTDV-----DKCEIEKEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDY-VFD  112 (273)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGG-GSC
T ss_pred             HHHHHhc-----CCCEEEECCcccCh-----hhhhhCHHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecce-eEc
Confidence            9988765     69999999997541     123467889999999999999998864    2  35999999873 322


Q ss_pred             CCC----------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 017635          195 STP----------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  231 (368)
Q Consensus       195 ~~~----------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~  231 (368)
                      +.+          ....|+.+|++++.+++.    +....+|++.|.
T Consensus       113 ~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~  155 (273)
T 2ggs_A          113 GEKGNYKEEDIPNPINYYGLSKLLGETFALQ----DDSLIIRTSGIF  155 (273)
T ss_dssp             SSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC----TTCEEEEECCCB
T ss_pred             CCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC----CCeEEEeccccc
Confidence            221          256899999999999887    222345555555

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.70  E-value=1.9e-16  Score=147.82  Aligned_cols=156  Identities=12%  Similarity=0.071  Sum_probs=121.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++|+||||+|+||++++++|+++|++|++++|+....+     +                     ..+.++.+|++ .++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~---------------------~~~~~~~~Dl~-~~~   55 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I---------------------NDYEYRVSDYT-LED   55 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------------------------CCEEEECCCC-HHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C---------------------CceEEEEcccc-HHH
Confidence            68999999999999999999999999999999843221     1                     14678999999 888


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.++++       ++|+|||+||.... .        +.+..+++|+.++.++++++..    . +.+++|++||.....
T Consensus        56 ~~~~~~-------~~d~Vih~a~~~~~-~--------~~~~~~~~n~~~~~~ll~a~~~----~-~~~r~v~~SS~~vyg  114 (311)
T 3m2p_A           56 LINQLN-------DVDAVVHLAATRGS-Q--------GKISEFHDNEILTQNLYDACYE----N-NISNIVYASTISAYS  114 (311)
T ss_dssp             HHHHTT-------TCSEEEECCCCCCS-S--------SCGGGTHHHHHHHHHHHHHHHH----T-TCCEEEEEEEGGGCC
T ss_pred             HHHhhc-------CCCEEEEccccCCC-C--------ChHHHHHHHHHHHHHHHHHHHH----c-CCCEEEEEccHHHhC
Confidence            877664       79999999998652 1        3456788999999998887743    3 456899999863221


Q ss_pred             C----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          194 S----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       194 ~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .          +......|+.+|.+.+.+++.++.+   .|++++.++||.+-.+..
T Consensus       115 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~  168 (311)
T 3m2p_A          115 DETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNE  168 (311)
T ss_dssp             CGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC
T ss_pred             CCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCC
Confidence            1          1123468999999999999998875   379999999999877643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.69  E-value=1.5e-16  Score=147.09  Aligned_cols=145  Identities=17%  Similarity=0.158  Sum_probs=114.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ..++|+||||+|+||++++++|+++|++|++++|+                                      .+|++|.
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~Dl~d~   52 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------------------------DLDITNV   52 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------------------------TCCTTCH
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------------------------cCCCCCH
Confidence            46899999999999999999999999999999885                                      2599999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++..     ++|+||||||....     +.+.++++..+++|+.++.++++++.+.     +. ++|++||.. 
T Consensus        53 ~~~~~~~~~~-----~~d~vih~A~~~~~-----~~~~~~~~~~~~~nv~~~~~l~~a~~~~-----~~-~iv~~SS~~-  115 (292)
T 1vl0_A           53 LAVNKFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GA-EIVQISTDY-  115 (292)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TC-EEEEEEEGG-
T ss_pred             HHHHHHHHhc-----CCCEEEECCccCCH-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEechHH-
Confidence            9998887754     69999999997431     2234678899999999999999998763     23 999999863 


Q ss_pred             CCCCC-----------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          192 GGSST-----------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       192 ~~~~~-----------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ...+.           .....|+.+|.+.+.+++.++.       .+..++|+.+-.+
T Consensus       116 v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          116 VFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD  166 (292)
T ss_dssp             GSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred             eECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence            22211           1356899999999999987653       3667778777644

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.69  E-value=9.6e-17  Score=165.23  Aligned_cols=167  Identities=11%  Similarity=0.055  Sum_probs=126.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++++|+||||+|+||.+++++|+++ |++|++++|+.++.++.    .                  ...++.++.+|++
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~------------------~~~~v~~v~~Dl~  370 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L------------------NHPHFHFVEGDIS  370 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T------------------TCTTEEEEECCTT
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c------------------cCCceEEEECCCC
Confidence            46789999999999999999999998 89999999987543211    0                  1246788999999


Q ss_pred             CHHH-HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPAD-VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~-v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |.++ ++++++       ++|+||||||...+ .    ...++.+..+++|+.++.++++++.+    . + +++|++||
T Consensus       371 d~~~~~~~~~~-------~~D~Vih~Aa~~~~-~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~-~-~r~V~~SS  432 (660)
T 1z7e_A          371 IHSEWIEYHVK-------KCDVVLPLVAIATP-I----EYTRNPLRVFELDFEENLRIIRYCVK----Y-R-KRIIFPST  432 (660)
T ss_dssp             TCHHHHHHHHH-------HCSEEEECCCCCCT-H----HHHHSHHHHHHHHTHHHHHHHHHHHH----T-T-CEEEEECC
T ss_pred             CcHHHHHHhhc-------CCCEEEECceecCc-c----ccccCHHHHHHhhhHHHHHHHHHHHH----h-C-CEEEEEec
Confidence            9764 555543       48999999997541 1    12345678999999999999887754    2 3 79999998


Q ss_pred             CCCCCCC--C---------------CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          189 AGSGGSS--T---------------PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       189 ~~~~~~~--~---------------~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .......  .               .....|+.||.+.+.+++.++.+.   |++++.++||.+-++..
T Consensus       433 ~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          433 SEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             GGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTS
T ss_pred             HHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCc
Confidence            6321110  0               123479999999999999998776   79999999999987653

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.68  E-value=1.3e-16  Score=148.45  Aligned_cols=164  Identities=13%  Similarity=0.133  Sum_probs=121.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +|+||||+|+||++++++|+++| ++|++++|+.....  ...+.                     .+. +.+|++|.+.
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~---------------------~~~-~~~d~~~~~~   56 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV---------------------DLN-IADYMDKEDF   56 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH---------------------TSC-CSEEEEHHHH
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC---------------------cce-eccccccHHH
Confidence            48999999999999999999999 99999999765421  11111                     112 6789999888


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++..  .++++|+|||+||....       +.++.+..+++|+.++.++++++.+.     +. ++|++||.....
T Consensus        57 ~~~~~~~~--~~~~~d~vi~~a~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~-----~~-~~v~~SS~~v~g  121 (310)
T 1eq2_A           57 LIQIMAGE--EFGDVEAIFHEGACSST-------TEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYG  121 (310)
T ss_dssp             HHHHHTTC--CCSSCCEEEECCSCCCT-------TCCCHHHHHHHTHHHHHHHHHHHHHH-----TC-CEEEEEEGGGGT
T ss_pred             HHHHHhcc--ccCCCcEEEECcccccC-------cccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeHHHhC
Confidence            87765421  02369999999997541       22346788999999999999988653     34 899999863211


Q ss_pred             CC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          194 SS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       194 ~~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ..          ......|+.+|.+.+.+++.++.+   .|++++.++||.+-.+..
T Consensus       122 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~  175 (310)
T 1eq2_A          122 GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE  175 (310)
T ss_dssp             TCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred             CCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCC
Confidence            11          112468999999999999998765   379999999999987753

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.67  E-value=2.6e-16  Score=146.35  Aligned_cols=160  Identities=13%  Similarity=0.008  Sum_probs=119.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++++||||||+|+||++++++|+++|+      +...                            ....+..+.+|++
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------------------------~~~~~~~~~~D~~   48 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------------------------DWVFVSSKDADLT   48 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------------------------EEEECCTTTCCTT
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------------------------cccccCceecccC
Confidence            45779999999999999999999999998      1100                            1123445688999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++..     ++|+|||+||.... .   ..+.++.+..+++|+.++.++++++..    . +.+++|++||.
T Consensus        49 d~~~~~~~~~~~-----~~d~Vih~A~~~~~-~---~~~~~~~~~~~~~nv~gt~~ll~a~~~----~-~~~~~v~~SS~  114 (319)
T 4b8w_A           49 DTAQTRALFEKV-----QPTHVIHLAAMVGG-L---FRNIKYNLDFWRKNVHMNDNVLHSAFE----V-GARKVVSCLST  114 (319)
T ss_dssp             SHHHHHHHHHHS-----CCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHH----T-TCSEEEEECCG
T ss_pred             CHHHHHHHHhhc-----CCCEEEECceeccc-c---cccccCHHHHHHHHHHHHHHHHHHHHH----c-CCCeEEEEcch
Confidence            999998887653     69999999997431 1   112234567899999999999887643    2 35689999987


Q ss_pred             CCCC---------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          190 GSGG---------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       190 ~~~~---------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      ....               ...|....|+.+|.+.+.+++.++++.   |++++.++||.+-.|..
T Consensus       115 ~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          115 CIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             GGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred             hhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence            3221               111223369999999999999998876   79999999999876643

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.64  E-value=9.5e-16  Score=141.15  Aligned_cols=145  Identities=14%  Similarity=0.110  Sum_probs=112.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      |+++||||+|+||++++++|+++  |++|++++|+.++.+.    +..                   ..+.++.+|++|.
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----l~~-------------------~~~~~~~~D~~d~   57 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST----LAD-------------------QGVEVRHGDYNQP   57 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH----HHH-------------------TTCEEEECCTTCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH----Hhh-------------------cCCeEEEeccCCH
Confidence            47999999999999999999999  9999999998766432    211                   2467889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++       ++|++||+||...        . +      ++|+.++.++++++..    . +.+++|++||...
T Consensus        58 ~~l~~~~~-------~~d~vi~~a~~~~--------~-~------~~n~~~~~~l~~a~~~----~-~~~~~v~~Ss~~~  110 (287)
T 2jl1_A           58 ESLQKAFA-------GVSKLLFISGPHY--------D-N------TLLIVQHANVVKAARD----A-GVKHIAYTGYAFA  110 (287)
T ss_dssp             HHHHHHTT-------TCSEEEECCCCCS--------C-H------HHHHHHHHHHHHHHHH----T-TCSEEEEEEETTG
T ss_pred             HHHHHHHh-------cCCEEEEcCCCCc--------C-c------hHHHHHHHHHHHHHHH----c-CCCEEEEECCCCC
Confidence            98887764       5899999998521        1 1      5788888888777643    3 4579999998733


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                       . .  ....|+.+|.+.+.+.+.       .|++++.++||.+.++.
T Consensus       111 -~-~--~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A          111 -E-E--SIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             -G-G--CCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHH
T ss_pred             -C-C--CCCchHHHHHHHHHHHHH-------cCCCeEEEECCEecccc
Confidence             2 1  224899999999988753       48999999999887664

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.64  E-value=5.7e-16  Score=142.76  Aligned_cols=144  Identities=18%  Similarity=0.186  Sum_probs=113.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+||||+|+||++++++|+++|++|++++|.                                      ++|++|.+++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------------------------~~D~~d~~~~   48 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------------------------LLDITNISQV   48 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------------------------TSCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------------------------ccCCCCHHHH
Confidence            89999999999999999999999999999982                                      2599999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++..     ++|+|||+||....     +...++++..+++|+.++.++++++.+.      +.++|++||......
T Consensus        49 ~~~~~~~-----~~d~vi~~a~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~v~~SS~~vy~~  112 (287)
T 3sc6_A           49 QQVVQEI-----RPHIIIHCAAYTKV-----DQAEKERDLAYVINAIGARNVAVASQLV------GAKLVYISTDYVFQG  112 (287)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-----HHHTTCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCC
T ss_pred             HHHHHhc-----CCCEEEECCcccCh-----HHHhcCHHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchhhhcCC
Confidence            9888765     69999999997541     1112457889999999999999988653      347999998632211


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          195 ----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       195 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                                +......|+.+|.+.+.+++.++.       +++.++||.+-.+.
T Consensus       113 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          113 DRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKY  160 (287)
T ss_dssp             CCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSS
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCC
Confidence                      112356899999999999987653       45789999886653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.64  E-value=6.8e-16  Score=143.00  Aligned_cols=147  Identities=17%  Similarity=0.126  Sum_probs=113.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++||||+|+||++++++|+ +|++|++++|+..                                  .+.+|++|.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------------------------~~~~D~~d~~~~   46 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------------------------EFCGDFSNPKGV   46 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------------------------SSCCCTTCHHHH
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------------------------cccccCCCHHHH
Confidence            69999999999999999999 8999999998751                                  146899999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++..     ++|+|||+||.... .    .+.++.+..+++|+.++.++++++.+    .  +.++|++||......
T Consensus        47 ~~~~~~~-----~~d~vih~a~~~~~-~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~--~~~~v~~SS~~vy~~  110 (299)
T 1n2s_A           47 AETVRKL-----RPDVIVNAAAHTAV-D----KAESEPELAQLLNATSVEAIAKAANE----T--GAWVVHYSTDYVFPG  110 (299)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-H----HHTTCHHHHHHHHTHHHHHHHHHHTT----T--TCEEEEEEEGGGSCC
T ss_pred             HHHHHhc-----CCCEEEECcccCCH-h----hhhcCHHHHHHHHHHHHHHHHHHHHH----c--CCcEEEEecccEEeC
Confidence            8887754     69999999997531 1    11234678899999999999887732    2  348999998632111


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          195 ----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       195 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                                +......|+.+|.+.+.+++.++.       +++.++||.+-.+.
T Consensus       111 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~  158 (299)
T 1n2s_A          111 TGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGK  158 (299)
T ss_dssp             CTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSS
T ss_pred             CCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCC
Confidence                      112246899999999999887642       78999999998764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.63  E-value=5e-15  Score=141.02  Aligned_cols=153  Identities=12%  Similarity=0.074  Sum_probs=111.5

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc-CC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD-VC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D-v~  109 (368)
                      +++|+++||||+|+||++++++|+++|++|++++|+.++..  .+++.+                  ...+.++.+| ++
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~------------------~~~v~~v~~D~l~   62 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA------------------IPNVTLFQGPLLN   62 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT------------------STTEEEEESCCTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh------------------cCCcEEEECCccC
Confidence            34688999999999999999999999999999999876542  122221                  1257788999 99


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCC-CcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPK-GGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-~g~Iv~isS  188 (368)
                      |.++++++++       .+|++|||++...       .         +.|..+     +.+++.+++. + .+++|++||
T Consensus        63 d~~~l~~~~~-------~~d~Vi~~a~~~~-------~---------~~~~~~-----~~l~~aa~~~-g~v~~~V~~SS  113 (352)
T 1xgk_A           63 NVPLMDTLFE-------GAHLAFINTTSQA-------G---------DEIAIG-----KDLADAAKRA-GTIQHYIYSSM  113 (352)
T ss_dssp             CHHHHHHHHT-------TCSEEEECCCSTT-------S---------CHHHHH-----HHHHHHHHHH-SCCSEEEEEEC
T ss_pred             CHHHHHHHHh-------cCCEEEEcCCCCC-------c---------HHHHHH-----HHHHHHHHHc-CCccEEEEeCC
Confidence            9999887764       5899999997531       0         124433     3444445444 3 579999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ......+.+....|+.||++.+.+++.+       |++++.++||++-+..
T Consensus       114 ~~~~~~~~~~~~~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          114 PDHSLYGPWPAVPMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             CCGGGTSSCCCCTTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGC
T ss_pred             ccccccCCCCCccHHHHHHHHHHHHHHc-------CCCEEEEecceecCCc
Confidence            7422333344568999999999988752       7999999999876543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.62  E-value=2.8e-15  Score=139.12  Aligned_cols=155  Identities=15%  Similarity=0.066  Sum_probs=111.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|+++||||+|+||++++++|+++| ++|++++|+.++...  +++..                   ..+.++.+|++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~-------------------~~~~~~~~D~~d~   63 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL-------------------QGAEVVQGDQDDQ   63 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH-------------------TTCEEEECCTTCH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH-------------------CCCEEEEecCCCH
Confidence            5799999999999999999999999 999999999765421  22222                   2467889999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++       .+|+||||+|....      ..       .+.|+.+.    +.+++.+++. +.++||++|+.+.
T Consensus        64 ~~l~~~~~-------~~d~vi~~a~~~~~------~~-------~~~~~~~~----~~~~~aa~~~-gv~~iv~~S~~~~  118 (299)
T 2wm3_A           64 VIMELALN-------GAYATFIVTNYWES------CS-------QEQEVKQG----KLLADLARRL-GLHYVVYSGLENI  118 (299)
T ss_dssp             HHHHHHHT-------TCSEEEECCCHHHH------TC-------HHHHHHHH----HHHHHHHHHH-TCSEEEECCCCCH
T ss_pred             HHHHHHHh-------cCCEEEEeCCCCcc------cc-------chHHHHHH----HHHHHHHHHc-CCCEEEEEcCccc
Confidence            99887764       58999999985320      01       23344444    4445555554 4678999665421


Q ss_pred             CC-CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccc
Q 017635          192 GG-SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL  240 (368)
Q Consensus       192 ~~-~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~  240 (368)
                      .. ...+....|+.+|.+++.+.+.       .|++++.++||++.+++.
T Consensus       119 ~~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~  161 (299)
T 2wm3_A          119 KKLTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLL  161 (299)
T ss_dssp             HHHTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGG
T ss_pred             cccCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhch
Confidence            11 1111246799999999988764       379999999999988764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.62  E-value=1.2e-15  Score=152.30  Aligned_cols=174  Identities=16%  Similarity=0.140  Sum_probs=124.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH---HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES---VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+++|+||||+|+||.+++++|.++|++|++++|+..+   .+...+.++.......        ......++.++.+|+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~--------~~~~~~~v~~v~~Dl  220 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEET--------VEMMLSNIEVIVGDF  220 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHH--------HHHHSTTEEEEEEBT
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhccccc--------chhccCceEEEecCC
Confidence            45899999999999999999999999999999998763   2333333322100000        000235789999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|++++.        ...++|+|||||+...        ..++++..+++|+.++.++++.+.+      +..++|++||
T Consensus       221 ~d~~~l~--------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~------~~~~~v~iSS  278 (508)
T 4f6l_B          221 ECMDDVV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ------HHARLIYVST  278 (508)
T ss_dssp             TBCSSCC--------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT------TTCEEEEEEE
T ss_pred             cccccCC--------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh------CCCcEEEeCC
Confidence            9987776        3458999999999753        1234677889999999999888754      3578999998


Q ss_pred             CCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          189 AGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       189 ~~~~~~-----------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ...+..                 +......|+.||.+.+.+++.++.    .|++++.++||.|-.+.
T Consensus       279 ~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~  342 (508)
T 4f6l_B          279 ISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPY  342 (508)
T ss_dssp             SCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCS
T ss_pred             hhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCC
Confidence            754110                 011457899999999999988653    48999999999997664

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.61  E-value=2.4e-14  Score=135.62  Aligned_cols=186  Identities=13%  Similarity=0.118  Sum_probs=126.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh----HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+++|+||||+|+||++++++|+++|++|++++|+.    ++.+ ..+++..                   ..+.++.+|
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~-------------------~~v~~~~~D   68 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED-------------------KGAIIVYGL   68 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH-------------------TTCEEEECC
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh-------------------CCcEEEEee
Confidence            457899999999999999999999999999999986    3322 2222322                   467889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.+++.+++++.     ++|+|||+||.                    .|+.++.++++++...    +...++|. |
T Consensus        69 l~d~~~l~~~~~~~-----~~d~Vi~~a~~--------------------~n~~~~~~l~~aa~~~----g~v~~~v~-S  118 (346)
T 3i6i_A           69 INEQEAMEKILKEH-----EIDIVVSTVGG--------------------ESILDQIALVKAMKAV----GTIKRFLP-S  118 (346)
T ss_dssp             TTCHHHHHHHHHHT-----TCCEEEECCCG--------------------GGGGGHHHHHHHHHHH----CCCSEEEC-S
T ss_pred             cCCHHHHHHHHhhC-----CCCEEEECCch--------------------hhHHHHHHHHHHHHHc----CCceEEee-c
Confidence            99999998887653     69999999985                    1778887777776543    12456664 4


Q ss_pred             CCCCC---CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-----chhh--hh-----
Q 017635          188 GAGSG---GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQ--MF-----  252 (368)
Q Consensus       188 S~~~~---~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~--~~-----  252 (368)
                      +.+..   ..+.+....|+.+|.+++.+.+.       .|++++.++||++-..+.......     ....  ..     
T Consensus       119 ~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~  191 (346)
T 3i6i_A          119 EFGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNV  191 (346)
T ss_dssp             CCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCC
T ss_pred             ccCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCc
Confidence            43211   11224557899999998887764       479999999998876543211100     0000  00     


Q ss_pred             hhhcCCHHHHHHHhhhhhhhcc
Q 017635          253 NIICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       253 ~~~~~~pe~~a~~~~~~~~~~~  274 (368)
                      .......+++|+.++..+..++
T Consensus       192 ~~~~i~~~Dva~~~~~~l~~~~  213 (346)
T 3i6i_A          192 KAYFVAGTDIGKFTMKTVDDVR  213 (346)
T ss_dssp             CEEEECHHHHHHHHHHHTTCGG
T ss_pred             eEEecCHHHHHHHHHHHHhCcc
Confidence            1112358899998887776654

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.61  E-value=4.1e-15  Score=136.73  Aligned_cols=176  Identities=12%  Similarity=0.071  Sum_probs=118.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++||||+|+||++++++|+++  |++|++++|+.++.+.    +..                   ..+.++.+|++|.+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~----~~~-------------------~~~~~~~~D~~d~~   57 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA----LAA-------------------QGITVRQADYGDEA   57 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH----HHH-------------------TTCEEEECCTTCHH
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh----hhc-------------------CCCeEEEcCCCCHH
Confidence            4899999999999999999998  9999999998765432    211                   24677899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++       ++|+|||+||...                 +.|+.++.++++++    ++. +.+++|++||... 
T Consensus        58 ~~~~~~~-------~~d~vi~~a~~~~-----------------~~~~~~~~~l~~a~----~~~-~~~~~v~~Ss~~~-  107 (286)
T 2zcu_A           58 ALTSALQ-------GVEKLLLISSSEV-----------------GQRAPQHRNVINAA----KAA-GVKFIAYTSLLHA-  107 (286)
T ss_dssp             HHHHHTT-------TCSEEEECC-------------------------CHHHHHHHHH----HHH-TCCEEEEEEETTT-
T ss_pred             HHHHHHh-------CCCEEEEeCCCCc-----------------hHHHHHHHHHHHHH----HHc-CCCEEEEECCCCC-
Confidence            8887654       5899999998521                 02566666665554    333 4579999998733 


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch-hhh------hhhhcCCHHHHHHH
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQM------FNIICELPETVART  265 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~------~~~~~~~pe~~a~~  265 (368)
                      .   +....|+.+|.+.+.+++.       .|++++.++||++.+++......... ...      ...-...++++|+.
T Consensus       108 ~---~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  177 (286)
T 2zcu_A          108 D---TSPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAA  177 (286)
T ss_dssp             T---TCCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHH
T ss_pred             C---CCcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHH
Confidence            2   2235899999999988763       37999999999887764311000000 000      00111257888888


Q ss_pred             hhhhhhhc
Q 017635          266 LVPRIRVV  273 (368)
Q Consensus       266 ~~~~~~~~  273 (368)
                      ++..+..+
T Consensus       178 ~~~~~~~~  185 (286)
T 2zcu_A          178 AARVISEA  185 (286)
T ss_dssp             HHHHHHSS
T ss_pred             HHHHhcCC
Confidence            87766543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.60  E-value=5.3e-16  Score=143.02  Aligned_cols=184  Identities=16%  Similarity=0.105  Sum_probs=126.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++++|+||| +|+||++++++|+++|++|++++|+.+++                           ...+.++.+|++|.
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------------------~~~~~~~~~Dl~d~   53 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------------------------PAGVQTLIADVTRP   53 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------------------------CTTCCEEECCTTCG
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------ccCCceEEccCCCh
Confidence            357899999 59999999999999999999999986541                           13577899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++      +++|+|||+||...          ++.+..+++|+.++.++++++.    +. +.+++|++||...
T Consensus        54 ~~~~~~~~------~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~ll~a~~----~~-~~~~~v~~SS~~v  112 (286)
T 3gpi_A           54 DTLASIVH------LRPEILVYCVAASE----------YSDEHYRLSYVEGLRNTLSALE----GA-PLQHVFFVSSTGV  112 (286)
T ss_dssp             GGCTTGGG------GCCSEEEECHHHHH----------HC-----CCSHHHHHHHHHHTT----TS-CCCEEEEEEEGGG
T ss_pred             HHHHHhhc------CCCCEEEEeCCCCC----------CCHHHHHHHHHHHHHHHHHHHh----hC-CCCEEEEEcccEE
Confidence            98877654      36999999998631          3456778999999988877764    33 4579999998632


Q ss_pred             CCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-chhhhhh-----hh
Q 017635          192 GGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-QNKQMFN-----II  255 (368)
Q Consensus       192 ~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-~~~~~~~-----~~  255 (368)
                      ...          +......|+.+|.+.+.+ +..        ++++.++||.+-.+........ .......     .-
T Consensus       113 yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  183 (286)
T 3gpi_A          113 YGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTN  183 (286)
T ss_dssp             CCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEEC
T ss_pred             EcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeE
Confidence            111          112356899999998887 432        7899999999876643210000 0000000     00


Q ss_pred             cCCHHHHHHHhhhhhhhc
Q 017635          256 CELPETVARTLVPRIRVV  273 (368)
Q Consensus       256 ~~~pe~~a~~~~~~~~~~  273 (368)
                      ....+++|+.++..+..+
T Consensus       184 ~i~v~Dva~~~~~~~~~~  201 (286)
T 3gpi_A          184 RIHRDDGAAFIAYLIQQR  201 (286)
T ss_dssp             EEEHHHHHHHHHHHHHHH
T ss_pred             EEEHHHHHHHHHHHHhhh
Confidence            124788888888777654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.59  E-value=2e-16  Score=147.73  Aligned_cols=164  Identities=15%  Similarity=0.067  Sum_probs=111.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +.+++|+||||+|+||++++++|+++|++|++++|+........+.+..               ......+.++.+|++ 
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~~~~~Dl~-   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGK---------------FLEKPVLELEERDLS-   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSE---------------EECSCGGGCCHHHHT-
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhh---------------hccCCCeeEEeCccc-
Confidence            4578999999999999999999999999999999976510000000000               001123444555655 


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                                      ++|+|||+||.... ....    ++....++ |+.++.++++++...     +.+++|++||..
T Consensus        69 ----------------~~d~vi~~a~~~~~-~~~~----~~~~~~~~-n~~~~~~ll~a~~~~-----~v~~~v~~SS~~  121 (321)
T 3vps_A           69 ----------------DVRLVYHLASHKSV-PRSF----KQPLDYLD-NVDSGRHLLALCTSV-----GVPKVVVGSTCE  121 (321)
T ss_dssp             ----------------TEEEEEECCCCCCH-HHHT----TSTTTTHH-HHHHHHHHHHHHHHH-----TCCEEEEEEEGG
T ss_pred             ----------------cCCEEEECCccCCh-HHHH----hCHHHHHH-HHHHHHHHHHHHHHc-----CCCeEEEecCHH
Confidence                            69999999997541 1111    11233456 999999998887553     356899999863


Q ss_pred             CCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCccc
Q 017635          191 SGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDLL  240 (368)
Q Consensus       191 ~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~~  240 (368)
                      ....          +......|+.+|.+.+.+++.++.+.   |+ +++.++||.+-.+..
T Consensus       122 v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~~  179 (321)
T 3vps_A          122 VYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPGE  179 (321)
T ss_dssp             GGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHSS---SSCEEEEEEECEEECTTC
T ss_pred             HhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCceEEEEeccccCcCC
Confidence            2111          11235789999999999999988763   78 999999999987653

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.58  E-value=5.3e-14  Score=130.66  Aligned_cols=182  Identities=13%  Similarity=0.181  Sum_probs=118.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-------HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-------ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      +++|+||||+|+||++++++|+++|++|++++|+.       ++.+. .+++..                   ..+.++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~-------------------~~v~~v~   61 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS-------------------LGVILLE   61 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH-------------------TTCEEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh-------------------CCCEEEE
Confidence            47899999999999999999999999999999986       44432 223322                   2467899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      +|++|.+++.++++       ++|+||||||...                    +.+..+++++    +++.+..+++|.
T Consensus        62 ~D~~d~~~l~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~l~~a----a~~~g~v~~~v~  110 (307)
T 2gas_A           62 GDINDHETLVKAIK-------QVDIVICAAGRLL--------------------IEDQVKIIKA----IKEAGNVKKFFP  110 (307)
T ss_dssp             CCTTCHHHHHHHHT-------TCSEEEECSSSSC--------------------GGGHHHHHHH----HHHHCCCSEEEC
T ss_pred             eCCCCHHHHHHHHh-------CCCEEEECCcccc--------------------cccHHHHHHH----HHhcCCceEEee
Confidence            99999998887765       5899999998632                    2334444444    444322467763


Q ss_pred             EcCCCCC----CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCccc-----chhhh-----
Q 017635          186 MDGAGSG----GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTI-----QNKQM-----  251 (368)
Q Consensus       186 isS~~~~----~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~-----~~~~~-----  251 (368)
                       |+.+..    ....|....| .+|.+++.+.+.       .|++++.++||++.+++.......     .....     
T Consensus       111 -S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (307)
T 2gas_A          111 -SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGD  181 (307)
T ss_dssp             -SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETT
T ss_pred             -cccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecC
Confidence             332211    1112335689 999999887753       279999999999987654221100     00000     


Q ss_pred             --hhhhcCCHHHHHHHhhhhhhhcc
Q 017635          252 --FNIICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       252 --~~~~~~~pe~~a~~~~~~~~~~~  274 (368)
                        .......++++|+.++..+..++
T Consensus       182 ~~~~~~~i~~~Dva~~~~~~l~~~~  206 (307)
T 2gas_A          182 GNVKGAYVTEADVGTFTIRAANDPN  206 (307)
T ss_dssp             SCSEEEEECHHHHHHHHHHHHTCGG
T ss_pred             CCcceEEeeHHHHHHHHHHHHcCcc
Confidence              00111368889988887765443

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.56  E-value=4e-14  Score=130.53  Aligned_cols=180  Identities=13%  Similarity=0.073  Sum_probs=116.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +|+||||+|+||++++++|+++ |++|++++|+.++....                       ....+.++.+|++|+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-----------------------~~~~v~~~~~D~~d~~~   58 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-----------------------WRGKVSVRQLDYFNQES   58 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-----------------------GBTTBEEEECCTTCHHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-----------------------hhCCCEEEEcCCCCHHH
Confidence            5999999999999999999998 99999999998754211                       12467889999999998


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       ++|+||||||...+        .       ..|+.++    +.+++.+++. +.++||++||.+ ..
T Consensus        59 l~~~~~-------~~d~vi~~a~~~~~--------~-------~~~~~~~----~~l~~aa~~~-gv~~iv~~Ss~~-~~  110 (289)
T 3e48_A           59 MVEAFK-------GMDTVVFIPSIIHP--------S-------FKRIPEV----ENLVYAAKQS-GVAHIIFIGYYA-DQ  110 (289)
T ss_dssp             HHHHTT-------TCSEEEECCCCCCS--------H-------HHHHHHH----HHHHHHHHHT-TCCEEEEEEESC-CS
T ss_pred             HHHHHh-------CCCEEEEeCCCCcc--------c-------hhhHHHH----HHHHHHHHHc-CCCEEEEEcccC-CC
Confidence            887764       68999999997431        1       1244444    4455555655 467999999863 22


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh-------hhhhcCCHHHHHHHh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM-------FNIICELPETVARTL  266 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~-------~~~~~~~pe~~a~~~  266 (368)
                      ..    ..|..+|...     .+...+...|++++.++||++.+++............       ...-...++++|+.+
T Consensus       111 ~~----~~~~~~~~~~-----~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~  181 (289)
T 3e48_A          111 HN----NPFHMSPYFG-----YASRLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGV  181 (289)
T ss_dssp             TT----CCSTTHHHHH-----HHHHHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHH
T ss_pred             CC----CCCccchhHH-----HHHHHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHH
Confidence            21    1233333211     1222233458999999999998875421100000000       000113588888888


Q ss_pred             hhhhhhcc
Q 017635          267 VPRIRVVK  274 (368)
Q Consensus       267 ~~~~~~~~  274 (368)
                      +..+..+.
T Consensus       182 ~~~l~~~~  189 (289)
T 3e48_A          182 IAIIKNPD  189 (289)
T ss_dssp             HHHHHCGG
T ss_pred             HHHHcCCC
Confidence            87766544

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.52  E-value=1.9e-13  Score=127.24  Aligned_cols=186  Identities=13%  Similarity=0.124  Sum_probs=120.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-----HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-----ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++|+||||+|+||++++++|+++|++|++++|+.     ++.+. .+++.                   ...+.++.+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~-------------------~~~~~~~~~D   63 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK-------------------QLGAKLIEAS   63 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH-------------------TTTCEEECCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH-------------------hCCeEEEeCC
Confidence            46899999999999999999999999999999984     23221 12221                   1357789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|++++.++++       ++|+|||++|.... .               .|+.+..++++++    ++.++.+++|+ |
T Consensus        64 ~~d~~~l~~~~~-------~~d~vi~~a~~~~~-~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S  115 (313)
T 1qyd_A           64 LDDHQRLVDALK-------QVDVVISALAGGVL-S---------------HHILEQLKLVEAI----KEAGNIKRFLP-S  115 (313)
T ss_dssp             SSCHHHHHHHHT-------TCSEEEECCCCSSS-S---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S
T ss_pred             CCCHHHHHHHHh-------CCCEEEECCccccc-h---------------hhHHHHHHHHHHH----HhcCCCceEEe-c
Confidence            999999887764       58999999997541 1               2566666655544    44422567874 4


Q ss_pred             CCCCCCC----C-CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcc------cchhhh-----
Q 017635          188 GAGSGGS----S-TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGST------IQNKQM-----  251 (368)
Q Consensus       188 S~~~~~~----~-~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~------~~~~~~-----  251 (368)
                      +.+....    + .|....| .+|.+++.+.+.       .|++++.++||++..++......      ......     
T Consensus       116 ~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (313)
T 1qyd_A          116 EFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGD  187 (313)
T ss_dssp             CCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTT
T ss_pred             CCcCCccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCC
Confidence            3321111    1 2345678 999998887752       47899999999886543221100      000000     


Q ss_pred             --hhhhcCCHHHHHHHhhhhhhhcc
Q 017635          252 --FNIICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       252 --~~~~~~~pe~~a~~~~~~~~~~~  274 (368)
                        .......++++|+.++..+..++
T Consensus       188 g~~~~~~i~~~Dva~~~~~~l~~~~  212 (313)
T 1qyd_A          188 GNVKGIWVDEDDVGTYTIKSIDDPQ  212 (313)
T ss_dssp             SCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred             CCceEEEEEHHHHHHHHHHHHhCcc
Confidence              00111358899998887765543

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.50  E-value=1.7e-13  Score=128.29  Aligned_cols=183  Identities=14%  Similarity=0.113  Sum_probs=115.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-H----HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-E----SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +++|+||||+|+||++++++|+++|++|++++|+. .    ...+..+++..                   ..+.++.+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~-------------------~~v~~v~~D   64 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS-------------------MGVTIIEGE   64 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH-------------------TTCEEEECC
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc-------------------CCcEEEEec
Confidence            36799999999999999999999999999999986 1    22222222221                   347789999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.+++.++++       .+|+||||+|...                    +.+..++    ++.+++.++.+++| .|
T Consensus        65 ~~d~~~l~~a~~-------~~d~vi~~a~~~~--------------------~~~~~~l----~~aa~~~g~v~~~v-~S  112 (321)
T 3c1o_A           65 MEEHEKMVSVLK-------QVDIVISALPFPM--------------------ISSQIHI----INAIKAAGNIKRFL-PS  112 (321)
T ss_dssp             TTCHHHHHHHHT-------TCSEEEECCCGGG--------------------SGGGHHH----HHHHHHHCCCCEEE-CS
T ss_pred             CCCHHHHHHHHc-------CCCEEEECCCccc--------------------hhhHHHH----HHHHHHhCCccEEe-cc
Confidence            999999887765       5899999998531                    2333344    44444432146777 33


Q ss_pred             CCCCC----CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCc-----ccchhh-------h
Q 017635          188 GAGSG----GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS-----TIQNKQ-------M  251 (368)
Q Consensus       188 S~~~~----~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~-----~~~~~~-------~  251 (368)
                      +.+..    ....|....| .+|.+++.+.+.       .|++++.++||++..++.....     ......       .
T Consensus       113 ~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (321)
T 3c1o_A          113 DFGCEEDRIKPLPPFESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGE  184 (321)
T ss_dssp             CCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSC
T ss_pred             ccccCccccccCCCcchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCC
Confidence            32110    0111224579 999999988763       2688888999987654321000     000000       0


Q ss_pred             hhhhcCCHHHHHHHhhhhhhhcc
Q 017635          252 FNIICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       252 ~~~~~~~pe~~a~~~~~~~~~~~  274 (368)
                      .......++++|+.++..+..++
T Consensus       185 ~~~~~i~~~Dva~~~~~~l~~~~  207 (321)
T 3c1o_A          185 TKFVLNYEEDIAKYTIKVACDPR  207 (321)
T ss_dssp             CEEEEECHHHHHHHHHHHHHCGG
T ss_pred             cceeEeeHHHHHHHHHHHHhCcc
Confidence            01112368889888887765443

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.49  E-value=1.2e-13  Score=129.08  Aligned_cols=182  Identities=11%  Similarity=0.126  Sum_probs=115.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+|+||||+|+||++++++|+++|++|++++|+.+...+..+++..                   ..+.++.+|++|.++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-------------------~~v~~v~~Dl~d~~~   72 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-------------------LGAIIVKGELDEHEK   72 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-------------------TTCEEEECCTTCHHH
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-------------------CCCEEEEecCCCHHH
Confidence            6899999999999999999999999999999987522222233322                   247789999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.++++       .+|+|||++|...                    +.+..+    +++.+++.++.+++|. |+.+...
T Consensus        73 l~~a~~-------~~d~vi~~a~~~~--------------------~~~~~~----l~~aa~~~g~v~~~v~-S~~g~~~  120 (318)
T 2r6j_A           73 LVELMK-------KVDVVISALAFPQ--------------------ILDQFK----ILEAIKVAGNIKRFLP-SDFGVEE  120 (318)
T ss_dssp             HHHHHT-------TCSEEEECCCGGG--------------------STTHHH----HHHHHHHHCCCCEEEC-SCCSSCT
T ss_pred             HHHHHc-------CCCEEEECCchhh--------------------hHHHHH----HHHHHHhcCCCCEEEe-eccccCc
Confidence            887764       5899999998531                    223333    3444444422567764 4332111


Q ss_pred             C----CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc---C-ccc-----chhhhhhhhcCCHH
Q 017635          194 S----STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS---G-STI-----QNKQMFNIICELPE  260 (368)
Q Consensus       194 ~----~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~---~-~~~-----~~~~~~~~~~~~pe  260 (368)
                      .    ..|....| .+|.+++.+.+.       .|++++.++||++...+...   . ...     ............++
T Consensus       121 ~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (318)
T 2r6j_A          121 DRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQ  192 (318)
T ss_dssp             TTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHH
T ss_pred             ccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHH
Confidence            1    01223578 999998887753       47888999999876543210   0 000     00000011112578


Q ss_pred             HHHHHhhhhhhhcc
Q 017635          261 TVARTLVPRIRVVK  274 (368)
Q Consensus       261 ~~a~~~~~~~~~~~  274 (368)
                      ++|+.++..+..++
T Consensus       193 Dva~~~~~~l~~~~  206 (318)
T 2r6j_A          193 DIGLYTIKVATDPR  206 (318)
T ss_dssp             HHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHhcCcc
Confidence            89888887765543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.48  E-value=2.5e-13  Score=126.18  Aligned_cols=151  Identities=14%  Similarity=0.210  Sum_probs=101.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH--HHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV--RMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .++|+||||+|+||++++++|+++|++|++++|+....  .+..+.++..                ....+.++.+|++|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l----------------~~~~v~~v~~D~~d   67 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------------KASGANIVHGSIDD   67 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------------HTTTCEEECCCTTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH----------------HhCCCEEEEeccCC
Confidence            47899999999999999999999999999999984321  1111112111                11357789999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+++.++++       ++|+|||++|...                    +.+...+    ++.+++.++.+++|. |+.+
T Consensus        68 ~~~l~~~~~-------~~d~vi~~a~~~~--------------------~~~~~~l----~~aa~~~g~v~~~v~-S~~g  115 (308)
T 1qyc_A           68 HASLVEAVK-------NVDVVISTVGSLQ--------------------IESQVNI----IKAIKEVGTVKRFFP-SEFG  115 (308)
T ss_dssp             HHHHHHHHH-------TCSEEEECCCGGG--------------------SGGGHHH----HHHHHHHCCCSEEEC-SCCS
T ss_pred             HHHHHHHHc-------CCCEEEECCcchh--------------------hhhHHHH----HHHHHhcCCCceEee-cccc
Confidence            999887765       5899999998531                    2233344    344444322567763 4432


Q ss_pred             CCC----CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          191 SGG----SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       191 ~~~----~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ...    ...|....| .+|.+++.+.+.       .|++++.++||++.+++
T Consensus       116 ~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~  160 (308)
T 1qyc_A          116 NDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYF  160 (308)
T ss_dssp             SCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHH
T ss_pred             cCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceecccc
Confidence            111    112334678 999998887763       26888999999886543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.48  E-value=4.2e-13  Score=123.35  Aligned_cols=175  Identities=13%  Similarity=0.095  Sum_probs=118.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++|+|||| |.||.+++++|+++|++|++++|+.++.+..    ..                   ..+.++.+|++|.+ 
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-------------------~~~~~~~~D~~d~~-   60 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAI----RA-------------------SGAEPLLWPGEEPS-   60 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHH----HH-------------------TTEEEEESSSSCCC-
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhH----hh-------------------CCCeEEEecccccc-
Confidence            68999998 9999999999999999999999998765432    11                   35788999999932 


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcEEEEEcCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNMDGAGSG  192 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~Iv~isS~~~~  192 (368)
                                 +.++|+|||+||.... .     ..                .++.++..+++. .+..++|++||....
T Consensus        61 -----------~~~~d~vi~~a~~~~~-~-----~~----------------~~~~l~~a~~~~~~~~~~~v~~Ss~~vy  107 (286)
T 3ius_A           61 -----------LDGVTHLLISTAPDSG-G-----DP----------------VLAALGDQIAARAAQFRWVGYLSTTAVY  107 (286)
T ss_dssp             -----------CTTCCEEEECCCCBTT-B-----CH----------------HHHHHHHHHHHTGGGCSEEEEEEEGGGG
T ss_pred             -----------cCCCCEEEECCCcccc-c-----cH----------------HHHHHHHHHHhhcCCceEEEEeecceec
Confidence                       4579999999997541 1     11                013344445442 145799999986322


Q ss_pred             CC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc---------hhhhhh
Q 017635          193 GS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ---------NKQMFN  253 (368)
Q Consensus       193 ~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~---------~~~~~~  253 (368)
                      ..          +......|+.+|.+.+.+.+.+      .|++++.++||.+-.+.........         ......
T Consensus       108 g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~  181 (286)
T 3ius_A          108 GDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFS  181 (286)
T ss_dssp             CCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBC
T ss_pred             CCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccc
Confidence            11          1122357999999999988776      5899999999999766422111000         001111


Q ss_pred             hhcCCHHHHHHHhhhhhhhcc
Q 017635          254 IICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       254 ~~~~~pe~~a~~~~~~~~~~~  274 (368)
                        ....+++|+.++..+..+.
T Consensus       182 --~i~v~Dva~a~~~~~~~~~  200 (286)
T 3ius_A          182 --RIHVEDIAQVLAASMARPD  200 (286)
T ss_dssp             --EEEHHHHHHHHHHHHHSCC
T ss_pred             --eEEHHHHHHHHHHHHhCCC
Confidence              1246889998887776544

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.42  E-value=8.3e-13  Score=131.99  Aligned_cols=155  Identities=19%  Similarity=0.238  Sum_probs=111.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++||||||+|+||.+++++|+++|++|++++|+..+.                               ..+.+|+.+..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------------------------~~v~~d~~~~~  195 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------------------------GKRFWDPLNPA  195 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------------------------TCEECCTTSCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------------------------cceeecccchh
Confidence            67999999999999999999999999999999986531                               11566776421


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                               .+.+.++|+|||+||... ..   ..+.+..+..+++|+.++.++++++.   ++. +.+++|++||.+..
T Consensus       196 ---------~~~l~~~D~Vih~A~~~~-~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~-~~~r~V~~SS~~vy  258 (516)
T 3oh8_A          196 ---------SDLLDGADVLVHLAGEPI-FG---RFNDSHKEAIRESRVLPTKFLAELVA---EST-QCTTMISASAVGFY  258 (516)
T ss_dssp             ---------TTTTTTCSEEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHH---HCS-SCCEEEEEEEGGGG
T ss_pred             ---------HHhcCCCCEEEECCCCcc-cc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcC-CCCEEEEeCcceEe
Confidence                     223357999999999754 11   34556778899999999999988643   222 46799999986322


Q ss_pred             C-C---------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          193 G-S---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       193 ~-~---------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      . .         ..+....|+.+|...+.+.+.    ....|++++.++||.+-.+.
T Consensus       259 g~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          259 GHDRGDEILTEESESGDDFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGR  311 (516)
T ss_dssp             CSEEEEEEECTTSCCCSSHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTT
T ss_pred             cCCCCCCccCCCCCCCcChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCC
Confidence            1 0         012345688888877665433    33458999999999998764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.42  E-value=4.5e-13  Score=127.32  Aligned_cols=159  Identities=16%  Similarity=0.127  Sum_probs=111.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCC-----CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSG-----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G-----~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +|+|+||||+|+||.+++++|+++|     ++|++++|+..+..     +                   ...++.++.+|
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~-------------------~~~~~~~~~~D   56 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H-------------------EDNPINYVQCD   56 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C-------------------CSSCCEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c-------------------ccCceEEEEee
Confidence            4689999999999999999999999     99999999865421     0                   12467889999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE---
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF---  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv---  184 (368)
                      ++|.++++++++.    .+++|+|||+||...          ++.+..+++|+.++.++++++.+...   +..++|   
T Consensus        57 l~d~~~~~~~~~~----~~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~---~~~~~v~~~  119 (364)
T 2v6g_A           57 ISDPDDSQAKLSP----LTDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCP---NLKHISLQT  119 (364)
T ss_dssp             TTSHHHHHHHHTT----CTTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCT---TCCEEEEEC
T ss_pred             cCCHHHHHHHHhc----CCCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhcc---ccceEEecc
Confidence            9999988876643    224999999999742          13577889999999999888765311   234665   


Q ss_pred             ----EEcCCCCCCCC-------------CCCchhhHHHHHHHHHHHHHHHHHhCCCC-eEEEEEecCcccCcc
Q 017635          185 ----NMDGAGSGGSS-------------TPLTAVYGSTKCGLRQLQASLFKESKRSK-VGVHTASPGMVLTDL  239 (368)
Q Consensus       185 ----~isS~~~~~~~-------------~~~~~~Y~aSKaal~~l~~~la~e~~~~g-I~v~~v~PG~v~T~~  239 (368)
                          ++||.......             .+....|.    +.+.+.+.++.   ..| +++..++|+.+-.+.
T Consensus       120 g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~  185 (364)
T 2v6g_A          120 GRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFS  185 (364)
T ss_dssp             CTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCC
T ss_pred             CceEEEechhhccccccCCCCCCccccCCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCC
Confidence                67765321110             11233563    23444444332   245 999999999987654

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.41  E-value=5.3e-13  Score=127.46  Aligned_cols=135  Identities=18%  Similarity=0.132  Sum_probs=105.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +|+||||+|+||++++++|+++|+ +|+..+|+                                          +|.++
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------------------------~d~~~   39 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------------------------TKEEE   39 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------------------------CCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------------------------CCHHH
Confidence            699999999999999999999998 77665542                                          56677


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++       ++|+|||+||...+ .        +.+..+++|+.++.++++++    ++.+...++|++||.....
T Consensus        40 l~~~~~-------~~d~Vih~a~~~~~-~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~   99 (369)
T 3st7_A           40 LESALL-------KADFIVHLAGVNRP-E--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ   99 (369)
T ss_dssp             HHHHHH-------HCSEEEECCCSBCT-T--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS
T ss_pred             HHHHhc-------cCCEEEECCcCCCC-C--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC
Confidence            777665       38999999997642 1        23446788999999887776    3332234899999873222


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                           ...|+.+|.+.+.+++.++++.   |+++..++|+.+-.+.
T Consensus       100 -----~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~  137 (369)
T 3st7_A          100 -----DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKW  137 (369)
T ss_dssp             -----CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred             -----CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCC
Confidence                 5789999999999999998876   6899999999887664

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.39  E-value=7.4e-14  Score=129.16  Aligned_cols=111  Identities=15%  Similarity=0.186  Sum_probs=83.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++||||+||+|+++++.|+++|++|++++|+.++.+++.+++...                  ..+.++.+|+
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~------------------~~~~~~~~D~  176 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------------------FKVNVTAAET  176 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------------HTCCCEEEEC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc------------------CCcEEEEecC
Confidence            4578999999999999999999999999999999999999888887776542                  1345678999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCH-HHHHHHHHhhchHHH
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN-EEIEQIVSTNLVGSI  164 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~-~~~~~~~~vN~~g~~  164 (368)
                      +|.++++++++       .+|+||||||......++.+.+. ++++..+++|+.+++
T Consensus       177 ~~~~~~~~~~~-------~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          177 ADDASRAEAVK-------GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             CSHHHHHHHTT-------TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CCHHHHHHHHH-------hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            99998877654       47999999986431122222222 344456777777665

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.30  E-value=5.9e-13  Score=117.69  Aligned_cols=191  Identities=13%  Similarity=0.101  Sum_probs=110.9

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCc
Q 017635           30 KAGPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        30 ~~~~k~vlITGa----------------s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      +++||+||||||                |||||+++|++|+++|++|++++++.. ++                      
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~----------------------   61 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP----------------------   61 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC----------------------
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc----------------------
Confidence            478999999999                689999999999999999999988642 10                      


Q ss_pred             ccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHH--HHhhchHHHHHHHHHH
Q 017635           94 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI--VSTNLVGSILCTREAM  171 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~--~~vN~~g~~~l~~~~l  171 (368)
                         ....+  -.+|+++.++   +++.+.+.++++|++|||||+.. +.+.. .+.+.+.+.  -+.|+.-.+..+.-++
T Consensus        62 ---~~~g~--~~~dv~~~~~---~~~~v~~~~~~~Dili~~Aav~d-~~p~~-~~~~KIkk~~~~~~~l~l~L~~~pdIL  131 (226)
T 1u7z_A           62 ---TPPFV--KRVDVMTALE---MEAAVNASVQQQNIFIGCAAVAD-YRAAT-VAPEKIKKQATQGDELTIKMVKNPDIV  131 (226)
T ss_dssp             ---CCTTE--EEEECCSHHH---HHHHHHHHGGGCSEEEECCBCCS-EEESS-CCSSCC-------CEEEEEEEECCCHH
T ss_pred             ---cCCCC--eEEccCcHHH---HHHHHHHhcCCCCEEEECCcccC-CCCcc-CChHHhccccccCCceEEEEeecHHHH
Confidence               00112  2468877554   55667778899999999999875 44442 233333331  1224333444445556


Q ss_pred             HHHHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc-ccCcccccCcc--cch
Q 017635          172 RVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM-VLTDLLLSGST--IQN  248 (368)
Q Consensus       172 p~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~-v~T~~~~~~~~--~~~  248 (368)
                      +.+.+....+.+ .++ . ....               +.+.+....++.++|+.+.+.+|-. ..+.+..+...  ...
T Consensus       132 ~~l~~~~~~~~~-~VG-F-aaEt---------------~~l~e~A~~kL~~k~~d~ivaN~~~~~~~~f~~~~n~v~li~  193 (226)
T 1u7z_A          132 AGVAALKDHRPY-VVG-F-AAET---------------NNVEEYARQKRIRKNLDLICANDVSQPTQGFNSDNNALHLFW  193 (226)
T ss_dssp             HHHHHCSSSCCE-EEE-E-EEES---------------SSHHHHHHHHHHHHTCSEEEEEECSSTTSSTTSSEEEEEEEE
T ss_pred             HHHHhhhcCCcE-EEE-c-chhh---------------chHHHHHHHHHHhcCCCEEEEeeccccCCccCCCceEEEEEe
Confidence            666553122332 221 1 1111               2255566666777788777777654 33333221100  000


Q ss_pred             h-hhhhhhcCCHHHHHHHhhhhhh
Q 017635          249 K-QMFNIICELPETVARTLVPRIR  271 (368)
Q Consensus       249 ~-~~~~~~~~~pe~~a~~~~~~~~  271 (368)
                      + ....+...+++++|+.++..+.
T Consensus       194 ~~~~~~~~~~sK~~vA~~I~~~i~  217 (226)
T 1u7z_A          194 QDGDKVLPLERKELLGQLLLDEIV  217 (226)
T ss_dssp             TTEEEEEEEEEHHHHHHHHHHHHH
T ss_pred             CCCcEecCCCCHHHHHHHHHHHHH
Confidence            1 0112334478899998887763

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.07  E-value=2.5e-09  Score=98.73  Aligned_cols=152  Identities=17%  Similarity=0.217  Sum_probs=99.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +||||||+|.||++++++|.++|++|++++|++.+                             ..+   ..|     .+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------------------------~~~---~~~-----~~   44 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------------------------GRI---TWD-----EL   44 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------------------------TEE---EHH-----HH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------------------------Cee---ecc-----hh
Confidence            59999999999999999999999999999997532                             111   111     11


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                            ..+....+|.+||.||... ..+....+.+..+..++.|+.++-++.+.+...   ..+...+|+.||......
T Consensus        45 ------~~~~l~~~d~vihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~---~~~~~~~i~~Ss~~vyg~  114 (298)
T 4b4o_A           45 ------AASGLPSCDAAVNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKA---PQPPKAWVLVTGVAYYQP  114 (298)
T ss_dssp             ------HHHCCCSCSEEEECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC---SSCCSEEEEEEEGGGSCC
T ss_pred             ------hHhhccCCCEEEEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh---CCCceEEEEEeeeeeecC
Confidence                  1123457999999998644 344455677778889999999888776654321   113345666666532111


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 ----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                                +......|+..|...+.     .......++++..+.||.|-.+
T Consensus       115 ~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~  163 (298)
T 4b4o_A          115 SLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGR  163 (298)
T ss_dssp             CSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECT
T ss_pred             CCCCcccccCCccccchhHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcC
Confidence                      11122345555444332     2234567899999999988765

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.04  E-value=2e-10  Score=108.00  Aligned_cols=161  Identities=14%  Similarity=0.091  Sum_probs=104.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      .+|+||||+|.||.+++..|+++|+       +|++.+++.  ++.+....++..                   ..+.++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-------------------~~~~~~   65 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-------------------CAFPLL   65 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-------------------TTCTTE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-------------------cccccc
Confidence            4799999999999999999999996       899999874  233322223321                   001111


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                       .|+.+.+++.+.+       ...|++||.||...  .+  ..+   ....+++|+.++..+++++..+-   +...+++
T Consensus        66 -~di~~~~~~~~a~-------~~~D~Vih~Ag~~~--~~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vv  127 (327)
T 1y7t_A           66 -AGLEATDDPKVAF-------KDADYALLVGAAPR--KA--GME---RRDLLQVNGKIFTEQGRALAEVA---KKDVKVL  127 (327)
T ss_dssp             -EEEEEESCHHHHT-------TTCSEEEECCCCCC--CT--TCC---HHHHHHHHHHHHHHHHHHHHHHS---CTTCEEE
T ss_pred             -CCeEeccChHHHh-------CCCCEEEECCCcCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHhhc---CCCeEEE
Confidence             3555433333332       36899999999754  12  223   35678999999999988776541   1245788


Q ss_pred             EEcCCCC-------CCC-CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCc
Q 017635          185 NMDGAGS-------GGS-STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGM  234 (368)
Q Consensus       185 ~isS~~~-------~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~  234 (368)
                      ++|+...       ... +.+....|+.||...+.+.+.+++.+   |+.+..++|..
T Consensus       128 v~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~  182 (327)
T 1y7t_A          128 VVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMT  182 (327)
T ss_dssp             ECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCE
T ss_pred             EeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeE
Confidence            8776420       011 24455679999999999988888776   34444444443

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.94  E-value=1.5e-09  Score=96.16  Aligned_cols=92  Identities=15%  Similarity=0.266  Sum_probs=65.8

Q ss_pred             CCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCccc
Q 017635           32 GPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN   95 (368)
Q Consensus        32 ~~k~vlITGa----------------s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~   95 (368)
                      +||+||||||                ||++|+++|++|+++|++|++++|+.....        .               
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~---------------   58 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------E---------------   58 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------C---------------
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------c---------------
Confidence            5899999999                788999999999999999999999753100        0               


Q ss_pred             ccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHH
Q 017635           96 LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE  153 (368)
Q Consensus        96 ~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~  153 (368)
                       ....+..  .|+.   +++++++.+.+.++++|++|+|||+.. +.+....+.+++.
T Consensus        59 -~~~~~~~--~~v~---s~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~  109 (232)
T 2gk4_A           59 -PHPNLSI--REIT---NTKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQ  109 (232)
T ss_dssp             -CCTTEEE--EECC---SHHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHH
T ss_pred             -CCCCeEE--EEHh---HHHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhh
Confidence             0112322  3444   566666777778889999999999876 5665544555444

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.79  E-value=2.4e-08  Score=78.50  Aligned_cols=75  Identities=21%  Similarity=0.199  Sum_probs=61.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+++++|+|+ |++|+++++.|.++| ++|++++|++++.+...    .                   ..+..+.+|+++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~-------------------~~~~~~~~d~~~   59 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R-------------------MGVATKQVDAKD   59 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T-------------------TTCEEEECCTTC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h-------------------CCCcEEEecCCC
Confidence            3578999999 999999999999999 89999999988765432    1                   235568899999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .++++++++       ++|++|++++.
T Consensus        60 ~~~~~~~~~-------~~d~vi~~~~~   79 (118)
T 3ic5_A           60 EAGLAKALG-------GFDAVISAAPF   79 (118)
T ss_dssp             HHHHHHHTT-------TCSEEEECSCG
T ss_pred             HHHHHHHHc-------CCCEEEECCCc
Confidence            888776653       68999999863

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.74  E-value=7.2e-09  Score=86.79  Aligned_cols=77  Identities=14%  Similarity=0.058  Sum_probs=62.7

Q ss_pred             hHHHHHHHHHHHCCCeEEEEeCChHHHH---HHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH--HHHHHHH
Q 017635           44 GLGKALAREFLLSGDRVVVASRSSESVR---MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP--ADVQKLS  118 (368)
Q Consensus        44 GIG~aia~~la~~G~~Vil~~R~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~--~~v~~~~  118 (368)
                      -++.++++.|++.|++|++..|+.....   +..+.+++                 .+.+...+++|++++  +++++++
T Consensus        27 ~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-----------------~G~~~~~i~~Dv~~~~~~~v~~~~   89 (157)
T 3gxh_A           27 LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-----------------AGMDYVYIPVDWQNPKVEDVEAFF   89 (157)
T ss_dssp             CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-----------------TTCEEEECCCCTTSCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-----------------cCCeEEEecCCCCCCCHHHHHHHH
Confidence            4779999999999999999988755432   12333333                 456788899999999  9999999


Q ss_pred             HHHHhHcCCCCEEEEccCCC
Q 017635          119 NFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       119 ~~i~~~~g~iD~li~nAG~~  138 (368)
                      +.+.+++|+ |+||||||+.
T Consensus        90 ~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           90 AAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHHHTTTS-CEEEECSBSH
T ss_pred             HHHHhcCCC-CEEEECCCCC
Confidence            999998999 9999999963

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.74  E-value=6.4e-08  Score=93.48  Aligned_cols=82  Identities=17%  Similarity=0.213  Sum_probs=70.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC---CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG---DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G---~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++|+|+|| ||+|+++++.|+++|   .+|++++|+.+++++..+++...                .+.++..+.+|++|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~----------------~~~~~~~~~~D~~d   64 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK----------------GYGEIDITTVDADS   64 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT----------------TCCCCEEEECCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh----------------cCCceEEEEecCCC
Confidence            57999999 899999999999998   38999999999998888777542                12357889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .++++++++..     ++|+||||+|.
T Consensus        65 ~~~l~~~l~~~-----~~DvVin~ag~   86 (405)
T 4ina_A           65 IEELVALINEV-----KPQIVLNIALP   86 (405)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECSCG
T ss_pred             HHHHHHHHHhh-----CCCEEEECCCc
Confidence            99999998765     69999999985

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.65  E-value=4.3e-11  Score=116.72  Aligned_cols=46  Identities=20%  Similarity=0.258  Sum_probs=40.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      .+++.||+++|||++ +||+++|+.|++.|++|+++++++.+.++..
T Consensus       260 g~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          260 DVMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            346899999999988 9999999999999999999999987765544

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.60  E-value=6.2e-09  Score=103.91  Aligned_cols=101  Identities=19%  Similarity=0.218  Sum_probs=67.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|+++|||| ||+|+++++.|+++|++|++++|+.++++++.+++.                    .++.    ++.
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~--------------------~~~~----~~~  415 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG--------------------GKAL----SLT  415 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT--------------------C-CE----ETT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--------------------Ccee----eHH
Confidence            467899999999 599999999999999999999999988776655431                    1121    121


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC----CCCCCCCCHHHHHHHHHhhchHHH
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG----FKPLLQFTNEEIEQIVSTNLVGSI  164 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~----~~~~~~~~~~~~~~~~~vN~~g~~  164 (368)
                      |   ++++      ..+.+|+||||+|+...    ..++.+.+.+++..++++|+.+..
T Consensus       416 d---l~~~------~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          416 D---LDNY------HPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             T---TTTC--------CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred             H---hhhc------cccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence            2   1100      11358999999997531    134556667778889999998753

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.57  E-value=2.7e-08  Score=91.70  Aligned_cols=82  Identities=24%  Similarity=0.373  Sum_probs=61.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++++|+++|||++ |+|+++|+.|+++| +|++++|+.++++++.+++.....                ... .+.+|+
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~----------------~~~-~~~~d~  184 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN----------------KKF-GEEVKF  184 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT----------------CCH-HHHEEE
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc----------------ccc-ceeEEE
Confidence            35789999999997 99999999999999 999999999988887777654210                000 112344


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                      ++.          .+.++++|+||||+|...
T Consensus       185 ~~~----------~~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          185 SGL----------DVDLDGVDIIINATPIGM  205 (287)
T ss_dssp             ECT----------TCCCTTCCEEEECSCTTC
T ss_pred             eeH----------HHhhCCCCEEEECCCCCC
Confidence            441          345678999999999754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.55  E-value=6.8e-08  Score=90.68  Aligned_cols=79  Identities=19%  Similarity=0.279  Sum_probs=59.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+++++||||++|||+++++.+...|++|++++|+.++++.+ +++                    +..   ..+|.++.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~--------------------g~~---~~~d~~~~  200 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI--------------------GFD---AAFNYKTV  200 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEETTSC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc--------------------CCc---EEEecCCH
Confidence            579999999999999999999999999999999998776544 322                    111   23477764


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +++.+.+.++..  +++|++|+|+|
T Consensus       201 ~~~~~~~~~~~~--~~~d~vi~~~g  223 (333)
T 1v3u_A          201 NSLEEALKKASP--DGYDCYFDNVG  223 (333)
T ss_dssp             SCHHHHHHHHCT--TCEEEEEESSC
T ss_pred             HHHHHHHHHHhC--CCCeEEEECCC
Confidence            445555544433  57999999998

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.52  E-value=1.7e-07  Score=91.64  Aligned_cols=78  Identities=21%  Similarity=0.204  Sum_probs=61.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|+|+||| +||+|+++++.|++.|++|++++|+.++++++.+++                     ..+..+.+|++|.
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---------------------~~~~~~~~Dv~d~   59 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------------------QHSTPISLDVNDD   59 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---------------------TTEEEEECCTTCH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---------------------CCceEEEeecCCH
Confidence            468999998 799999999999999999999999987654432211                     1356788999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      ++++++++       ++|+||||++..
T Consensus        60 ~~l~~~l~-------~~DvVIn~a~~~   79 (450)
T 1ff9_A           60 AALDAEVA-------KHDLVISLIPYT   79 (450)
T ss_dssp             HHHHHHHT-------TSSEEEECCC--
T ss_pred             HHHHHHHc-------CCcEEEECCccc
Confidence            88877653       699999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.51  E-value=1.5e-07  Score=81.34  Aligned_cols=79  Identities=16%  Similarity=0.173  Sum_probs=56.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|++++||||++|||+++++.+...|++|++++|++++.+.+    ++                 .+..   ..+|.++.
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~-----------------~g~~---~~~d~~~~   93 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SR-----------------LGVE---YVGDSRSV   93 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HT-----------------TCCS---EEEETTCS
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HH-----------------cCCC---EEeeCCcH
Confidence            579999999999999999999999999999999998765432    11                 1111   12477765


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +..+.+.+...  .+++|++|+|+|
T Consensus        94 ~~~~~~~~~~~--~~~~D~vi~~~g  116 (198)
T 1pqw_A           94 DFADEILELTD--GYGVDVVLNSLA  116 (198)
T ss_dssp             THHHHHHHHTT--TCCEEEEEECCC
T ss_pred             HHHHHHHHHhC--CCCCeEEEECCc
Confidence            54444433221  136999999987

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.46  E-value=4.2e-07  Score=86.68  Aligned_cols=106  Identities=20%  Similarity=0.284  Sum_probs=74.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+.+                    +..   +.+|.+
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~--------------------g~~---~~~~~~  218 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF--------------------GGR---VITLTA  218 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------TTS---EEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc--------------------Cce---EEEecC
Confidence            578899999999 99999999999999999999999988776543222                    122   356778


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +.+++++++.       +.|++|+++|.... .                   .+..+.+..++.|+   +++.||++++.
T Consensus       219 ~~~~l~~~~~-------~~DvVi~~~g~~~~-~-------------------~~~li~~~~l~~mk---~gg~iV~v~~~  268 (369)
T 2eez_A          219 TEANIKKSVQ-------HADLLIGAVLVPGA-K-------------------APKLVTRDMLSLMK---EGAVIVDVAVD  268 (369)
T ss_dssp             CHHHHHHHHH-------HCSEEEECCC---------------------------CCSCHHHHTTSC---TTCEEEECC--
T ss_pred             CHHHHHHHHh-------CCCEEEECCCCCcc-c-------------------cchhHHHHHHHhhc---CCCEEEEEecC
Confidence            8877766653       58999999986420 0                   01223455667774   46899999754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.40  E-value=2.5e-06  Score=79.18  Aligned_cols=84  Identities=18%  Similarity=0.259  Sum_probs=64.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++...                .+..+  .
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~----------------~~~~~--~  210 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK----------------TDCKA--Q  210 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH----------------SSCEE--E
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh----------------cCCce--E
Confidence            4678999999997 6999999999999998 89999999   88888888777653                12223  3


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      ..++.+.+++.+.+.       ..|+|||+....
T Consensus       211 ~~~~~~~~~l~~~l~-------~aDiIINaTp~G  237 (315)
T 3tnl_A          211 LFDIEDHEQLRKEIA-------ESVIFTNATGVG  237 (315)
T ss_dssp             EEETTCHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             EeccchHHHHHhhhc-------CCCEEEECccCC
Confidence            446666666554432       579999988654

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.34  E-value=1.2e-06  Score=86.00  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=61.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++++|+|+|+ ||+|+++++.|++. |++|++++|+.++++++.++                      ..+..+.+|+
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----------------------~~~~~~~~D~   76 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----------------------SGSKAISLDV   76 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----------------------GTCEEEECCT
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----------------------cCCcEEEEec
Confidence            566789999997 99999999999998 78999999998876654322                      1245578999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      .|.+++.++++       ++|+|||+++..
T Consensus        77 ~d~~~l~~~l~-------~~DvVIn~tp~~   99 (467)
T 2axq_A           77 TDDSALDKVLA-------DNDVVISLIPYT   99 (467)
T ss_dssp             TCHHHHHHHHH-------TSSEEEECSCGG
T ss_pred             CCHHHHHHHHc-------CCCEEEECCchh
Confidence            99988776654       589999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.30  E-value=1.5e-06  Score=81.88  Aligned_cols=80  Identities=18%  Similarity=0.139  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++++|+|+++|||+++++.+...|++|++++|++++++.+ +++                    +..   ..+|+++.
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~--------------------g~~---~~~d~~~~  224 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI--------------------GGE---VFIDFTKE  224 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT--------------------TCC---EEEETTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc--------------------CCc---eEEecCcc
Confidence            579999999999999999999999999999999998776432 221                    122   23477755


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +++.+.+.++...  ++|++|+|+|.
T Consensus       225 ~~~~~~~~~~~~~--~~D~vi~~~g~  248 (347)
T 2hcy_A          225 KDIVGAVLKATDG--GAHGVINVSVS  248 (347)
T ss_dssp             SCHHHHHHHHHTS--CEEEEEECSSC
T ss_pred             HhHHHHHHHHhCC--CCCEEEECCCc
Confidence            5566666555433  79999999984

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.27  E-value=1.9e-06  Score=78.57  Aligned_cols=48  Identities=10%  Similarity=0.141  Sum_probs=42.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~  162 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLF  162 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHT
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHh
Confidence            3578999999998 79999999999999999999999998887766554

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.27  E-value=1.9e-06  Score=69.92  Aligned_cols=77  Identities=14%  Similarity=0.249  Sum_probs=56.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++++++|+|+ |++|..+++.|.+.|++|++++|++++.+..    .+                   .....+.+|.++
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~-------------------~~~~~~~~d~~~   59 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----AS-------------------YATHAVIANATE   59 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TT-------------------TCSEEEECCTTC
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-------------------hCCEEEEeCCCC
Confidence            45688999998 9999999999999999999999987654321    11                   123457789998


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .+.++++      ...+.|++|++++.
T Consensus        60 ~~~l~~~------~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           60 ENELLSL------GIRNFEYVIVAIGA   80 (144)
T ss_dssp             HHHHHTT------TGGGCSEEEECCCS
T ss_pred             HHHHHhc------CCCCCCEEEECCCC
Confidence            7665433      13468999998874

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.25  E-value=4.5e-06  Score=67.85  Aligned_cols=75  Identities=17%  Similarity=0.345  Sum_probs=58.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++++++|+|+ |.+|+++++.|.++|++|+++++++++.+...+                       ..+.++.+|.+++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-----------------------~~~~~~~gd~~~~   60 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-----------------------EGFDAVIADPTDE   60 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-----------------------TTCEEEECCTTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------------------CCCcEEECCCCCH
Confidence            4578999998 679999999999999999999999887654322                       1255688999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +.++++      ...+.|++|.+.+
T Consensus        61 ~~l~~~------~~~~~d~vi~~~~   79 (141)
T 3llv_A           61 SFYRSL------DLEGVSAVLITGS   79 (141)
T ss_dssp             HHHHHS------CCTTCSEEEECCS
T ss_pred             HHHHhC------CcccCCEEEEecC
Confidence            877654      2246899998765

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.25  E-value=8.4e-07  Score=82.93  Aligned_cols=79  Identities=10%  Similarity=0.121  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+++++||||++|||+++++.+...|++|++++|++++++.+.+ +                    +..   ..+|.++.
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~--------------------g~~---~~~~~~~~  195 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A--------------------GAW---QVINYREE  195 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c--------------------CCC---EEEECCCc
Confidence            58999999999999999999999999999999999877654322 2                    111   12466665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +..+.+.+...  ..++|++|+|+|
T Consensus       196 ~~~~~~~~~~~--~~~~D~vi~~~g  218 (327)
T 1qor_A          196 DLVERLKEITG--GKKVRVVYDSVG  218 (327)
T ss_dssp             CHHHHHHHHTT--TCCEEEEEECSC
T ss_pred             cHHHHHHHHhC--CCCceEEEECCc
Confidence            54444433221  136999999998

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.24  E-value=5.9e-07  Score=84.59  Aligned_cols=80  Identities=21%  Similarity=0.263  Sum_probs=58.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+||+||+|.++++.+...|++|++++|++++++.+.+++                    +..   ..+|.++.
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~--------------------g~~---~~~d~~~~  211 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF--------------------GFD---DAFNYKEE  211 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS--------------------CCS---EEEETTSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCc---eEEecCCH
Confidence            5799999999999999999999999999999999988765443221                    121   12366654


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +++.+.+.++..  +++|++|+|+|
T Consensus       212 ~~~~~~~~~~~~--~~~d~vi~~~g  234 (345)
T 2j3h_A          212 SDLTAALKRCFP--NGIDIYFENVG  234 (345)
T ss_dssp             SCSHHHHHHHCT--TCEEEEEESSC
T ss_pred             HHHHHHHHHHhC--CCCcEEEECCC
Confidence            344444444322  47999999987

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.23  E-value=1.2e-06  Score=82.10  Aligned_cols=80  Identities=13%  Similarity=0.172  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+++++||||+||||.++++.+...|++|++++|++++++.+. ++                    +..   ..+|.++.
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~--------------------g~~---~~~d~~~~  200 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL--------------------GCH---HTINYSTQ  200 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEECCCH
Confidence            5799999999999999999999999999999999987765432 22                    111   22466665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+.+.. .. .++|++|+|+|.
T Consensus       201 ~~~~~i~~~~-~~-~~~d~vi~~~g~  224 (333)
T 1wly_A          201 DFAEVVREIT-GG-KGVDVVYDSIGK  224 (333)
T ss_dssp             CHHHHHHHHH-TT-CCEEEEEECSCT
T ss_pred             HHHHHHHHHh-CC-CCCeEEEECCcH
Confidence            4444443322 11 369999999984

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.22  E-value=1.4e-06  Score=82.44  Aligned_cols=80  Identities=16%  Similarity=0.226  Sum_probs=57.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+||||+||||.++++.+...|++|++++|++++++.+ +++                    +..   ..+|..+.
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~~~  217 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL--------------------GAA---AGFNYKKE  217 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc--------------------CCc---EEEecCCh
Confidence            479999999999999999999999999999999998877654 332                    111   23466654


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+.+.. . .+++|++|+|+|.
T Consensus       218 ~~~~~~~~~~-~-~~~~d~vi~~~G~  241 (354)
T 2j8z_A          218 DFSEATLKFT-K-GAGVNLILDCIGG  241 (354)
T ss_dssp             CHHHHHHHHT-T-TSCEEEEEESSCG
T ss_pred             HHHHHHHHHh-c-CCCceEEEECCCc
Confidence            4444333221 1 1369999999984

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.21  E-value=1.3e-06  Score=81.91  Aligned_cols=80  Identities=28%  Similarity=0.315  Sum_probs=57.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|++|+|+||+||||.++++.+...|++|++++|++++++.+.+++                    +..   ...|..+.
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~--------------------g~~---~~~~~~~~  205 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL--------------------GFD---GAIDYKNE  205 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------------------CCS---EEEETTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------------------CCC---EEEECCCH
Confidence            5899999999999999999999999999999999988776543332                    121   12466654


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+.+ ..  .+++|++|+|+|.
T Consensus       206 ~~~~~~~~-~~--~~~~d~vi~~~g~  228 (336)
T 4b7c_A          206 DLAAGLKR-EC--PKGIDVFFDNVGG  228 (336)
T ss_dssp             CHHHHHHH-HC--TTCEEEEEESSCH
T ss_pred             HHHHHHHH-hc--CCCceEEEECCCc
Confidence            43333332 21  2469999999983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.20  E-value=1.9e-06  Score=81.43  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=56.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+++++|+||+||+|.++++.+...|++|++++|++++++.+ +++                    +..   ..+|..+.
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------ga~---~~~d~~~~  225 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN--------------------GAH---EVFNHREV  225 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCS---EEEETTST
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHc--------------------CCC---EEEeCCCc
Confidence            479999999999999999999999999999999998876532 221                    111   23466665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +..+++.+.. . ..++|++|+|+|
T Consensus       226 ~~~~~~~~~~-~-~~~~D~vi~~~G  248 (351)
T 1yb5_A          226 NYIDKIKKYV-G-EKGIDIIIEMLA  248 (351)
T ss_dssp             THHHHHHHHH-C-TTCEEEEEESCH
T ss_pred             hHHHHHHHHc-C-CCCcEEEEECCC
Confidence            4444333222 1 126999999998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.19  E-value=1.1e-06  Score=83.10  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=56.1

Q ss_pred             CC--CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           32 GP--RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        32 ~~--k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+  ++|+||||+||||.++++.+...|+ +|+++++++++++.+.+++                    +..   ..+|.
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~--------------------g~~---~~~d~  214 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL--------------------GFD---AAINY  214 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS--------------------CCS---EEEET
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc--------------------CCc---eEEec
Confidence            46  8999999999999999999999999 9999999987765443222                    111   23466


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      .+.+..+. +.+...  +++|++|+|+|
T Consensus       215 ~~~~~~~~-~~~~~~--~~~d~vi~~~G  239 (357)
T 2zb4_A          215 KKDNVAEQ-LRESCP--AGVDVYFDNVG  239 (357)
T ss_dssp             TTSCHHHH-HHHHCT--TCEEEEEESCC
T ss_pred             CchHHHHH-HHHhcC--CCCCEEEECCC
Confidence            66433332 222222  26999999998

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.15  E-value=3.2e-06  Score=79.27  Aligned_cols=152  Identities=10%  Similarity=0.117  Sum_probs=97.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCC----hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCcee
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRS----SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKV  101 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v  101 (368)
                      +.+|+||||+|.+|..++..|+.+|.       +|++.+++    .++++....++....                 ...
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~-----------------~~~   67 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA-----------------FPL   67 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT-----------------CTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc-----------------ccc
Confidence            45899999999999999999999885       79999998    655655455554310                 001


Q ss_pred             EEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc
Q 017635          102 AGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG  181 (368)
Q Consensus       102 ~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g  181 (368)
                         ..|+...++..+.       +...|++|+.||...  .+  ..+.   ...+..|+.....+++.+..+-   +..+
T Consensus        68 ---~~~i~~~~~~~~a-------l~~aD~Vi~~ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a  127 (329)
T 1b8p_A           68 ---LAGMTAHADPMTA-------FKDADVALLVGARPR--GP--GMER---KDLLEANAQIFTVQGKAIDAVA---SRNI  127 (329)
T ss_dssp             ---EEEEEEESSHHHH-------TTTCSEEEECCCCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTC
T ss_pred             ---cCcEEEecCcHHH-------hCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCe
Confidence               0133222222222       236899999999754  21  2233   3467888888877777665541   1356


Q ss_pred             EEEEEcCCC-------CCCC-CCCCchhhHHHHHHHHHHHHHHHHHhC
Q 017635          182 HIFNMDGAG-------SGGS-STPLTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       182 ~Iv~isS~~-------~~~~-~~~~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      +++++|...       .... +.|..-.|+.++.--..+...+++.+.
T Consensus       128 ~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          128 KVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             EEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             EEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            899987631       0112 345555688887666677777887764

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.10  E-value=1.3e-05  Score=73.35  Aligned_cols=51  Identities=22%  Similarity=0.307  Sum_probs=45.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEEN   80 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~   80 (368)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++...
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~  174 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA  174 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh
Confidence            3678999999998 7999999999999998 7999999999999888888653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=4e-06  Score=79.02  Aligned_cols=80  Identities=13%  Similarity=0.198  Sum_probs=56.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+++++|||+++|||.++++.+... |++|+++++++++++.+ +++                    +..   ..+|..+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~--------------------g~~---~~~~~~~  225 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA--------------------GAD---YVINASM  225 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH--------------------TCS---EEEETTT
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh--------------------CCC---EEecCCC
Confidence            5799999999999999999999998 99999999998876543 222                    111   1235555


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .+..+.+. ++... +++|++|+|+|.
T Consensus       226 ~~~~~~~~-~~~~~-~~~d~vi~~~g~  250 (347)
T 1jvb_A          226 QDPLAEIR-RITES-KGVDAVIDLNNS  250 (347)
T ss_dssp             SCHHHHHH-HHTTT-SCEEEEEESCCC
T ss_pred             ccHHHHHH-HHhcC-CCceEEEECCCC
Confidence            43333222 22111 579999999984

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.08  E-value=2.7e-05  Score=72.14  Aligned_cols=84  Identities=18%  Similarity=0.254  Sum_probs=61.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC---hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS---SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+   .++++++.+++...                .+..+.  
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~----------------~~~~v~--  204 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN----------------TDCVVT--  204 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH----------------SSCEEE--
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc----------------cCcceE--
Confidence            4678999999997 8999999999999998 89999999   88888887777653                122333  


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      ..+..+.+...+.+.       ..|++||+....
T Consensus       205 ~~~~~~l~~~~~~l~-------~~DiIINaTp~G  231 (312)
T 3t4e_A          205 VTDLADQHAFTEALA-------SADILTNGTKVG  231 (312)
T ss_dssp             EEETTCHHHHHHHHH-------HCSEEEECSSTT
T ss_pred             EechHhhhhhHhhcc-------CceEEEECCcCC
Confidence            335555433332222       479999987654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.98  E-value=3.8e-05  Score=69.88  Aligned_cols=48  Identities=19%  Similarity=0.278  Sum_probs=43.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++++|+++|+|+ ||+|+++++.|++.|++|++++|+.++++++.+++
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~  162 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERF  162 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc
Confidence            3678999999998 79999999999999999999999999888776665

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.97  E-value=1.2e-05  Score=76.00  Aligned_cols=79  Identities=19%  Similarity=0.196  Sum_probs=57.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+||+||+|.++++.+...|++|++++|++++++.+. ++                    +...   ..|..+.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l--------------------Ga~~---~~~~~~~  222 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL--------------------GAKR---GINYRSE  222 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCSE---EEETTTS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc--------------------CCCE---EEeCCch
Confidence            5789999999999999999999999999999999998876432 22                    1111   2355554


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+.+ ..  .+++|++|+|+|.
T Consensus       223 ~~~~~~~~-~~--~~g~Dvvid~~g~  245 (353)
T 4dup_A          223 DFAAVIKA-ET--GQGVDIILDMIGA  245 (353)
T ss_dssp             CHHHHHHH-HH--SSCEEEEEESCCG
T ss_pred             HHHHHHHH-Hh--CCCceEEEECCCH
Confidence            43333333 22  3579999999984

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.92  E-value=3e-05  Score=75.61  Aligned_cols=85  Identities=20%  Similarity=0.196  Sum_probs=59.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE--eccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--ACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~Dv~  109 (368)
                      .|++|+|+||+||||.+.++.+...|++|+++++++++++.+ +++                    +....+-  ..|+.
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l--------------------Ga~~~i~~~~~~~~  278 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL--------------------GCDLVINRAELGIT  278 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCCCEEEHHHHTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc--------------------CCCEEEeccccccc
Confidence            589999999999999999999999999999999988877643 222                    1221111  12221


Q ss_pred             ---------CHHHHHHHHHHHHhHcC-CCCEEEEccCC
Q 017635          110 ---------EPADVQKLSNFAVNEFG-SIDIWINNAGT  137 (368)
Q Consensus       110 ---------~~~~v~~~~~~i~~~~g-~iD~li~nAG~  137 (368)
                               +.++++.+.+++.+..+ .+|++|+|+|.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             TTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             ccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc
Confidence                     23455555666665544 59999999983

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.91  E-value=1.5e-05  Score=74.91  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+++++|+|+++|+|.++++.+...|++|++++|++++++.+. ++                    +...   .+|.++.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~--------------------ga~~---~~d~~~~  221 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL--------------------GADE---TVNYTHP  221 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH--------------------TCSE---EEETTST
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc--------------------CCCE---EEcCCcc
Confidence            5789999999999999999999999999999999988776542 22                    1111   2466664


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +-.+. +.++.. ..++|++|+|+|
T Consensus       222 ~~~~~-~~~~~~-~~~~d~vi~~~g  244 (343)
T 2eih_A          222 DWPKE-VRRLTG-GKGADKVVDHTG  244 (343)
T ss_dssp             THHHH-HHHHTT-TTCEEEEEESSC
T ss_pred             cHHHH-HHHHhC-CCCceEEEECCC
Confidence            32222 222211 136999999998

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.91  E-value=1e-05  Score=75.75  Aligned_cols=40  Identities=15%  Similarity=0.345  Sum_probs=37.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .|++++|+||+||+|.++++.+...|++|+++++++++++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~  187 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK  187 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            5899999999999999999999999999999999988766

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.85  E-value=1.4e-05  Score=74.53  Aligned_cols=80  Identities=11%  Similarity=0.114  Sum_probs=56.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+||+||+|.++++.+...|++|+++++++++++.+. ++                    +..   ...|..+.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~--------------------Ga~---~~~~~~~~  195 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL--------------------GAW---ETIDYSHE  195 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCC---EEEeCCCc
Confidence            5899999999999999999999999999999999988776432 22                    111   12355554


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+.+.. . ...+|++|+|+|.
T Consensus       196 ~~~~~~~~~~-~-~~g~Dvvid~~g~  219 (325)
T 3jyn_A          196 DVAKRVLELT-D-GKKCPVVYDGVGQ  219 (325)
T ss_dssp             CHHHHHHHHT-T-TCCEEEEEESSCG
T ss_pred             cHHHHHHHHh-C-CCCceEEEECCCh
Confidence            3333332221 1 1269999999984

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.84  E-value=0.00027  Score=65.98  Aligned_cols=114  Identities=16%  Similarity=0.148  Sum_probs=71.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+|+||||+|.+|..++..|+.+|  .+|++.+++++  +....++....               ...++..    +.+.
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~---------------~~~~v~~----~~~t   67 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMD---------------TGAVVRG----FLGQ   67 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSC---------------SSCEEEE----EESH
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhccc---------------ccceEEE----EeCC
Confidence            479999999999999999999998  78999998876  22233332200               0112222    2233


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      ++.++++       ...|++|++||...  .+-  .+.   ...+.+|+.+...+++.+..+    ...+.|+++
T Consensus        68 ~d~~~al-------~gaDvVi~~ag~~~--~~g--~~r---~dl~~~N~~~~~~i~~~i~~~----~p~~~viv~  124 (326)
T 1smk_A           68 QQLEAAL-------TGMDLIIVPAGVPR--KPG--MTR---DDLFKINAGIVKTLCEGIAKC----CPRAIVNLI  124 (326)
T ss_dssp             HHHHHHH-------TTCSEEEECCCCCC--CSS--CCC---SHHHHHHHHHHHHHHHHHHHH----CTTSEEEEC
T ss_pred             CCHHHHc-------CCCCEEEEcCCcCC--CCC--CCH---HHHHHHHHHHHHHHHHHHHhh----CCCeEEEEE
Confidence            4444433       36899999999754  221  121   234788888888887776554    234455554

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.81  E-value=0.00018  Score=57.59  Aligned_cols=75  Identities=17%  Similarity=0.279  Sum_probs=55.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++++|+|+ |.+|..+++.|.+.|++|++++|++++.+...++                      ..+.++..|.++.+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----------------------~~~~~~~~d~~~~~   60 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----------------------IDALVINGDCTKIK   60 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------------------CSSEEEESCTTSHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----------------------cCcEEEEcCCCCHH
Confidence            357899987 9999999999999999999999998765443211                      12345778988877


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      .+.+.      ...+.|++|.+.+
T Consensus        61 ~l~~~------~~~~~d~vi~~~~   78 (140)
T 1lss_A           61 TLEDA------GIEDADMYIAVTG   78 (140)
T ss_dssp             HHHHT------TTTTCSEEEECCS
T ss_pred             HHHHc------CcccCCEEEEeeC
Confidence            65331      1246899999864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.79  E-value=0.00011  Score=60.45  Aligned_cols=77  Identities=13%  Similarity=0.138  Sum_probs=56.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .++++|.|+ |.+|+.+++.|.+.|++|++++++. ++.+...+..                    ...+.++..|.+++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~--------------------~~~~~~i~gd~~~~   61 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL--------------------GDNADVIPGDSNDS   61 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH--------------------CTTCEEEESCTTSH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh--------------------cCCCeEEEcCCCCH
Confidence            467888986 9999999999999999999999984 5443332221                    12367789999998


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +.++++      ...+.|.+|.+.+
T Consensus        62 ~~l~~a------~i~~ad~vi~~~~   80 (153)
T 1id1_A           62 SVLKKA------GIDRCRAILALSD   80 (153)
T ss_dssp             HHHHHH------TTTTCSEEEECSS
T ss_pred             HHHHHc------ChhhCCEEEEecC
Confidence            876553      1236899998764

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.79  E-value=1.6e-05  Score=74.58  Aligned_cols=42  Identities=10%  Similarity=0.181  Sum_probs=38.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|++|+|+||++|+|..+++.+...|++|+++++++++++.+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  185 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL  185 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            579999999999999999999999999999999998877544

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.76  E-value=5.5e-05  Score=69.70  Aligned_cols=48  Identities=19%  Similarity=0.287  Sum_probs=41.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++++|+++|+|+ ||+|+++++.|++.|+ +|++++|+.++++++.+++
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~  185 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREG  185 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            3578999999997 7999999999999998 9999999998877665543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.73  E-value=0.00013  Score=69.20  Aligned_cols=45  Identities=24%  Similarity=0.250  Sum_probs=40.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   75 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~   75 (368)
                      .+++++|+|+|+ ||+|+++++.+...|++|++++|+.++++.+.+
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~  208 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLET  208 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            467799999999 999999999999999999999999988766543

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.72  E-value=5.6e-05  Score=71.67  Aligned_cols=40  Identities=23%  Similarity=0.261  Sum_probs=35.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh---HHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS---ESVR   71 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~---~~~~   71 (368)
                      ++|++|+|+|+ ||+|..+++.+...|++|++++++.   ++.+
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~  221 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT  221 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence            34899999999 9999999999999999999999988   6653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.70  E-value=0.00013  Score=71.37  Aligned_cols=85  Identities=21%  Similarity=0.273  Sum_probs=62.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE--ecc--
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI--ACD--  107 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~D--  107 (368)
                      .|++|+|+||+|++|...++.+...|++|+++++++++++.+ +++.                    ....+-  ..|  
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lG--------------------a~~vi~~~~~d~~  286 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMG--------------------AEAIIDRNAEGYR  286 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHT--------------------CCEEEETTTTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhC--------------------CcEEEecCcCccc
Confidence            578999999999999999999999999999999988877644 3321                    111111  111  


Q ss_pred             ------CCCHHHHHHHHHHHHhHcC--CCCEEEEccCC
Q 017635          108 ------VCEPADVQKLSNFAVNEFG--SIDIWINNAGT  137 (368)
Q Consensus       108 ------v~~~~~v~~~~~~i~~~~g--~iD~li~nAG~  137 (368)
                            ..+.++++++.+.+.+..+  .+|++|.++|.
T Consensus       287 ~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          287 FWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             SEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCH
T ss_pred             ccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCc
Confidence                  3466777777777776543  69999999883

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.68  E-value=6.1e-05  Score=70.73  Aligned_cols=41  Identities=17%  Similarity=0.315  Sum_probs=37.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+||+||+|.++++.+...|++|++++++.++.+.
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~  199 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEF  199 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            58999999999999999999999999999999999888753

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.68  E-value=0.00013  Score=69.24  Aligned_cols=79  Identities=14%  Similarity=0.203  Sum_probs=57.3

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .++|.-+.++|+|.|| |++|+.+|+.|++ .++|.+++|+.++++++.                        ..+..+.
T Consensus         9 ~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~------------------------~~~~~~~   62 (365)
T 3abi_A            9 HHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK------------------------EFATPLK   62 (365)
T ss_dssp             -------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT------------------------TTSEEEE
T ss_pred             cccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh------------------------ccCCcEE
Confidence            3444444557999998 9999999999875 589999999988765431                        1344578


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +|+.|.+++.++++       +.|+|||+++.
T Consensus        63 ~d~~d~~~l~~~~~-------~~DvVi~~~p~   87 (365)
T 3abi_A           63 VDASNFDKLVEVMK-------EFELVIGALPG   87 (365)
T ss_dssp             CCTTCHHHHHHHHT-------TCSEEEECCCG
T ss_pred             EecCCHHHHHHHHh-------CCCEEEEecCC
Confidence            99999998887764       57999999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.66  E-value=9e-05  Score=69.71  Aligned_cols=42  Identities=24%  Similarity=0.290  Sum_probs=37.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .++++||+||+||+|...++.+...|++|+++++++++++.+
T Consensus       164 g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  205 (349)
T 3pi7_A          164 GEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL  205 (349)
T ss_dssp             CCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            348999999999999999999999999999999999887644

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.61  E-value=6.7e-05  Score=69.19  Aligned_cols=38  Identities=32%  Similarity=0.417  Sum_probs=33.1

Q ss_pred             CCCCCe-EEEEcCCC-----------------h-HHHHHHHHHHHCCCeEEEEeCCh
Q 017635           30 KAGPRN-VVITGSTR-----------------G-LGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        30 ~~~~k~-vlITGas~-----------------G-IG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ++.||+ ||||+|..                 | +|.++|+.++++|+.|+++++..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            457787 99998866                 6 99999999999999999998853

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.61  E-value=0.00055  Score=63.43  Aligned_cols=151  Identities=15%  Similarity=0.133  Sum_probs=88.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|+||||+|.+|..++..|+..|.  .+++.++  +.++++....++......             .+..+.....|  |
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~-------------~~~~~~i~~~~--d   66 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAG-------------TRSDANIYVES--D   66 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTT-------------SCCCCEEEEEE--T
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHh-------------cCCCeEEEeCC--c
Confidence            689999999999999999998884  6888998  766665555555432100             11122222111  0


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                        ++.+       .+...|++|+.||...  .+  ..+.   ...++.|+.+...+++.+..+    . .+.|+++|...
T Consensus        67 --~l~~-------al~gaD~Vi~~Ag~~~--~~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~-~~~vlv~SNPv  125 (313)
T 1hye_A           67 --ENLR-------IIDESDVVIITSGVPR--KE--GMSR---MDLAKTNAKIVGKYAKKIAEI----C-DTKIFVITNPV  125 (313)
T ss_dssp             --TCGG-------GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHH----C-CCEEEECSSSH
T ss_pred             --chHH-------HhCCCCEEEECCCCCC--CC--CCcH---HHHHHHHHHHHHHHHHHHHHh----C-CeEEEEecCcH
Confidence              1111       2236899999999754  21  1232   345888998888887776554    3 34555554321


Q ss_pred             C-------CCCCCCCchhhHH-HHHHHHHHHHHHHHHhC
Q 017635          191 S-------GGSSTPLTAVYGS-TKCGLRQLQASLFKESK  221 (368)
Q Consensus       191 ~-------~~~~~~~~~~Y~a-SKaal~~l~~~la~e~~  221 (368)
                      .       -..+.|..-.++. +..-...+...+++.+.
T Consensus       126 ~~~t~~~~k~~~~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          126 DVMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             HHHHHHHHHHHCCCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhCcChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            0       0112344445555 55445556666666664

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.59  E-value=0.0002  Score=67.00  Aligned_cols=77  Identities=22%  Similarity=0.223  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+|+ +|+|..+++.+...|++|++++|++++++.+. ++                    +..   ..+|..+.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l--------------------Ga~---~~~d~~~~  218 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL--------------------GAD---LVVNPLKE  218 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT--------------------TCS---EEECTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC--------------------CCC---EEecCCCc
Confidence            5789999999 88999999999999999999999988776432 21                    122   12466653


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      + +.+.+.++.   +++|++|+++|.
T Consensus       219 ~-~~~~~~~~~---~~~d~vid~~g~  240 (339)
T 1rjw_A          219 D-AAKFMKEKV---GGVHAAVVTAVS  240 (339)
T ss_dssp             C-HHHHHHHHH---SSEEEEEESSCC
T ss_pred             c-HHHHHHHHh---CCCCEEEECCCC
Confidence            3 222222222   579999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.59  E-value=0.00017  Score=68.70  Aligned_cols=78  Identities=18%  Similarity=0.189  Sum_probs=58.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+.+++++|+|+ |+||+++++.+...|++|++.+|+.++++.+.+.+                    +..+   .+|..
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~--------------------g~~~---~~~~~  220 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF--------------------CGRI---HTRYS  220 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------------------TTSS---EEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc--------------------CCee---EeccC
Confidence            578999999998 99999999999999999999999988776543322                    1121   22445


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      +.+++.+++.       ..|++|++++..
T Consensus       221 ~~~~l~~~l~-------~aDvVi~~~~~p  242 (377)
T 2vhw_A          221 SAYELEGAVK-------RADLVIGAVLVP  242 (377)
T ss_dssp             CHHHHHHHHH-------HCSEEEECCCCT
T ss_pred             CHHHHHHHHc-------CCCEEEECCCcC
Confidence            5555555442       479999998864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.57  E-value=0.00017  Score=59.42  Aligned_cols=78  Identities=19%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +..+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+..                      ......+..|..
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~----------------------~~g~~~~~~d~~   72 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS----------------------EFSGFTVVGDAA   72 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT----------------------TCCSEEEESCTT
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh----------------------cCCCcEEEecCC
Confidence            456789999996 899999999999999999999999876532110                      112345678888


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +.+.+++.      .....|++|.+.+
T Consensus        73 ~~~~l~~~------~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           73 EFETLKEC------GMEKADMVFAFTN   93 (155)
T ss_dssp             SHHHHHTT------TGGGCSEEEECSS
T ss_pred             CHHHHHHc------CcccCCEEEEEeC
Confidence            86654321      1235899998875

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.56  E-value=0.00023  Score=63.75  Aligned_cols=86  Identities=16%  Similarity=0.190  Sum_probs=63.9

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHhhhhhh
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMM   86 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~-------------------~~~~~~~~~l~~~~~~~~~   86 (368)
                      .+.++++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+.+.+.+.+..     
T Consensus        25 ~q~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-----   98 (249)
T 1jw9_B           25 GQEALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN-----   98 (249)
T ss_dssp             HHHHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC-----
T ss_pred             HHHHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC-----
Confidence            344567899999996 6999999999999996 899999987                   77877777776532     


Q ss_pred             hcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           87 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                                +..++..+..++++ +.+.+++       ...|++|.+..
T Consensus        99 ----------p~~~v~~~~~~~~~-~~~~~~~-------~~~DvVi~~~d  130 (249)
T 1jw9_B           99 ----------PHIAITPVNALLDD-AELAALI-------AEHDLVLDCTD  130 (249)
T ss_dssp             ----------TTSEEEEECSCCCH-HHHHHHH-------HTSSEEEECCS
T ss_pred             ----------CCcEEEEEeccCCH-hHHHHHH-------hCCCEEEEeCC
Confidence                      23466777777763 3444333       26899998753

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.56  E-value=0.00015  Score=61.51  Aligned_cols=78  Identities=15%  Similarity=0.196  Sum_probs=57.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++.+++++|.| .|.+|..+++.|.+. |++|++++|++++.+.+    .+                 .  .+.++..|.
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~-----------------~--g~~~~~gd~   91 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RS-----------------E--GRNVISGDA   91 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HH-----------------T--TCCEEECCT
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HH-----------------C--CCCEEEcCC
Confidence            45677899998 489999999999999 99999999998876543    22                 1  244577899


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ++.+.++++     ....+.|++|.+.+
T Consensus        92 ~~~~~l~~~-----~~~~~ad~vi~~~~  114 (183)
T 3c85_A           92 TDPDFWERI-----LDTGHVKLVLLAMP  114 (183)
T ss_dssp             TCHHHHHTB-----CSCCCCCEEEECCS
T ss_pred             CCHHHHHhc-----cCCCCCCEEEEeCC
Confidence            987655432     01246899998765

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.55  E-value=0.00017  Score=68.29  Aligned_cols=41  Identities=17%  Similarity=0.177  Sum_probs=37.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+||+||+|..+++.+...|++|+++++++++++.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~  203 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF  203 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence            57899999999999999999999999999999999877654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.54  E-value=0.00022  Score=66.93  Aligned_cols=42  Identities=19%  Similarity=0.313  Sum_probs=38.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|++|+|+||+|++|...++.+...|++|+++++++++++.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT  191 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            589999999999999999999999999999999998876543

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.49  E-value=0.00011  Score=67.61  Aligned_cols=42  Identities=21%  Similarity=0.290  Sum_probs=37.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .|++++|+|++||+|..+++.+...|++|+++++++++++.+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~  166 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP  166 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            579999999999999999999999999999999998876543

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.47  E-value=0.0025  Score=58.70  Aligned_cols=113  Identities=12%  Similarity=0.098  Sum_probs=70.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeC--ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASR--SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|+||||+|.+|..++..|+..|.  ++++.++  ++++++....++.....              ....+.... |  +
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~--------------~~~~~~v~~-~--~   64 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------------YDSNTRVRQ-G--G   64 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------------TTCCCEEEE-C--C
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh--------------hCCCcEEEe-C--C
Confidence            689999999999999999998884  6889999  77766554555543211              011222222 2  2


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      .+.           +...|++|+.||...  .+  ..+.+   ..+..|+.+...+.+.+    .+....+.|+++
T Consensus        65 ~~a-----------~~~aDvVi~~ag~~~--~~--g~~r~---dl~~~N~~i~~~i~~~i----~~~~p~~~viv~  118 (303)
T 1o6z_A           65 YED-----------TAGSDVVVITAGIPR--QP--GQTRI---DLAGDNAPIMEDIQSSL----DEHNDDYISLTT  118 (303)
T ss_dssp             GGG-----------GTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHHHHHHHHH----HTTCSCCEEEEC
T ss_pred             HHH-----------hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHHHHHHHHHHH----HHHCCCcEEEEe
Confidence            221           236899999999754  22  22333   35788888777766555    444334555554

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.46  E-value=0.00059  Score=55.20  Aligned_cols=73  Identities=18%  Similarity=0.164  Sum_probs=56.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++++|.|+ |.+|..+++.|.+.|++|+++++++++.+++.    +                   ..+.++..|.++++.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~-------------------~g~~~i~gd~~~~~~   63 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----E-------------------RGVRAVLGNAANEEI   63 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----H-------------------TTCEEEESCTTSHHH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----H-------------------cCCCEEECCCCCHHH
Confidence            46788886 78999999999999999999999998765432    2                   134568899999887


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ++++      ...+.|.+|.+.+
T Consensus        64 l~~a------~i~~ad~vi~~~~   80 (140)
T 3fwz_A           64 MQLA------HLECAKWLILTIP   80 (140)
T ss_dssp             HHHT------TGGGCSEEEECCS
T ss_pred             HHhc------CcccCCEEEEECC
Confidence            6553      1235799987754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.44  E-value=0.00026  Score=66.40  Aligned_cols=39  Identities=23%  Similarity=0.387  Sum_probs=35.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .|++|||+||+|++|..+++.+...|++|+++ +++++++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~  188 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLE  188 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHH
Confidence            57999999999999999999999999999998 7777654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.43  E-value=0.0002  Score=67.79  Aligned_cols=75  Identities=20%  Similarity=0.218  Sum_probs=55.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+|+ |++|..+++.+...|++|+++++++++.+.+.+++                    +..   ...|..+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l--------------------Ga~---~v~~~~~~  242 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF--------------------GAD---SFLVSRDQ  242 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS--------------------CCS---EEEETTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------------------CCc---eEEeccCH
Confidence            6899999996 99999999999999999999999988776543222                    222   12366665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +.++++       .+.+|++|+++|.
T Consensus       243 ~~~~~~-------~~~~D~vid~~g~  261 (366)
T 1yqd_A          243 EQMQAA-------AGTLDGIIDTVSA  261 (366)
T ss_dssp             HHHHHT-------TTCEEEEEECCSS
T ss_pred             HHHHHh-------hCCCCEEEECCCc
Confidence            443322       2579999999985

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.37  E-value=0.00037  Score=63.27  Aligned_cols=48  Identities=25%  Similarity=0.322  Sum_probs=42.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~  164 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL  164 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh
Confidence            4678999999997 6999999999999996 9999999999988777665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.37  E-value=0.0058  Score=56.80  Aligned_cols=119  Identities=19%  Similarity=0.144  Sum_probs=76.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+.++|.|+|+ |.+|.+++..|+..|.  +|++.++++++++....+|....+-             .+..+.....| 
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~v~i~~~~-   67 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAF-------------APQPVKTSYGT-   67 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------SSSCCEEEEEC-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhcccc-------------ccCCeEEEeCc-
Confidence            34578999996 9999999999999986  8999999999888877777663211             11122323222 


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                        .           +.+..-|++|..||...  ++  ..+.   ...++.|..-.    +.+.+.+.+....+.++++|-
T Consensus        68 --~-----------~a~~~aDvVvi~ag~p~--kp--G~~R---~dL~~~N~~Iv----~~i~~~I~~~~p~a~vlvvtN  123 (326)
T 3pqe_A           68 --Y-----------EDCKDADIVCICAGANQ--KP--GETR---LELVEKNLKIF----KGIVSEVMASGFDGIFLVATN  123 (326)
T ss_dssp             --G-----------GGGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHH----HHHHHHHHHTTCCSEEEECSS
T ss_pred             --H-----------HHhCCCCEEEEecccCC--CC--CccH---HHHHHHHHHHH----HHHHHHHHHhcCCeEEEEcCC
Confidence              1           11236899999999753  22  2232   33456665444    444455554445677777753

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.35  E-value=0.00038  Score=63.44  Aligned_cols=49  Identities=10%  Similarity=0.196  Sum_probs=43.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~   78 (368)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+++.
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~  171 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA  171 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh
Confidence            4678999999998 6999999999999996 99999999999888777764

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.29  E-value=0.00036  Score=66.27  Aligned_cols=39  Identities=18%  Similarity=0.271  Sum_probs=33.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .|++|+|+||+|++|...++.+...|++|+.++ +.++.+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~  221 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE  221 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence            589999999999999999999989999999888 445543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.27  E-value=0.0002  Score=58.32  Aligned_cols=44  Identities=23%  Similarity=0.326  Sum_probs=38.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+.++.++..+++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~   64 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY   64 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh
Confidence            789999996 99999999999999999999999998877655543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.25  E-value=0.003  Score=58.67  Aligned_cols=118  Identities=16%  Similarity=0.217  Sum_probs=69.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +.++++|.|+|+ |++|.+++..|+..|.  +|++.++++++++....+|.....-             . ..+.....|
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~-~~~~i~~~~   70 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPF-------------T-SPKKIYSAE   70 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGG-------------S-CCCEEEECC
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhh-------------c-CCcEEEECc
Confidence            456788999996 9999999999999886  8999999999888777777542110             0 122222222


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                         .           +.+..-|++|+.||...  ++  ..   .-...++.|.--    .+.+.+.+.+....+.++++|
T Consensus        71 ---~-----------~a~~~aDiVvi~ag~~~--kp--G~---tR~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           71 ---Y-----------SDAKDADLVVITAGAPQ--KP--GE---TRLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             ---G-----------GGGTTCSEEEECCCCC-----------------------C----HHHHHHHHHTTTCCSEEEECS
T ss_pred             ---H-----------HHhcCCCEEEECCCCCC--CC--Cc---hHHHHHHHHHHH----HHHHHHHHHhcCCceEEEEcc
Confidence               1           12346899999999753  21  11   223445556543    344455555554567777775

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.25  E-value=0.0017  Score=59.42  Aligned_cols=94  Identities=14%  Similarity=0.127  Sum_probs=69.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh------------------HHHHHHHHHHHHHhhhhhh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS------------------ESVRMTVTELEENLKEGMM   86 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~------------------~~~~~~~~~l~~~~~~~~~   86 (368)
                      +.+-++++++|+|.|+ ||+|.++++.|++.|. ++.+++++.                  .|.+.+.+.+++.+     
T Consensus        29 ~~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iN-----  102 (292)
T 3h8v_A           29 SDYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNIN-----  102 (292)
T ss_dssp             ---CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHC-----
T ss_pred             HHHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhC-----
Confidence            4556778899999995 6999999999999994 899999875                  56666666666543     


Q ss_pred             hcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhH----cCCCCEEEEcc
Q 017635           87 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNE----FGSIDIWINNA  135 (368)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~----~g~iD~li~nA  135 (368)
                                +..++..+..++++.+.++.+++.+...    ....|+||.+.
T Consensus       103 ----------P~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          103 ----------PDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ----------TTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ----------CCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence                      3467888888998877777776544321    13689999764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.21  E-value=0.0019  Score=56.17  Aligned_cols=73  Identities=21%  Similarity=0.167  Sum_probs=56.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++|.|+ |.+|..+++.|.++|++|+++++++++.++..++                      ....++..|.++.+.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----------------------~~~~~i~gd~~~~~~l   58 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----------------------LKATIIHGDGSHKEIL   58 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----------------------SSSEEEESCTTSHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----------------------cCCeEEEcCCCCHHHH
Confidence            5899996 8899999999999999999999999877654322                      1355789999998876


Q ss_pred             HHHHHHHHhHcCCCCEEEEccC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +++      ...+.|++|.+.+
T Consensus        59 ~~a------~i~~ad~vi~~~~   74 (218)
T 3l4b_C           59 RDA------EVSKNDVVVILTP   74 (218)
T ss_dssp             HHH------TCCTTCEEEECCS
T ss_pred             Hhc------CcccCCEEEEecC
Confidence            643      1246899987654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.18  E-value=0.00052  Score=64.42  Aligned_cols=41  Identities=27%  Similarity=0.258  Sum_probs=36.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|..+++.+...|+ +|++++|++++++.+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~  208 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA  208 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            7899999999 9999999999999999 999999998776543

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.17  E-value=0.0017  Score=61.18  Aligned_cols=83  Identities=12%  Similarity=0.059  Sum_probs=57.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .|++|+|+|+ |++|...++.+...|++ |+++++++++++.+. ++ .                   ..+..+..|-.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-~-------------------~~~~~~~~~~~~  236 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI-C-------------------PEVVTHKVERLS  236 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH-C-------------------TTCEEEECCSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-c-------------------hhcccccccccc
Confidence            5789999998 99999999988889997 999999988776432 32 1                   123334455555


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .+++.+.+.+... -..+|++|.++|.
T Consensus       237 ~~~~~~~v~~~t~-g~g~Dvvid~~g~  262 (363)
T 3m6i_A          237 AEESAKKIVESFG-GIEPAVALECTGV  262 (363)
T ss_dssp             HHHHHHHHHHHTS-SCCCSEEEECSCC
T ss_pred             hHHHHHHHHHHhC-CCCCCEEEECCCC
Confidence            5555444433321 1369999999884

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.15  E-value=0.00082  Score=64.58  Aligned_cols=47  Identities=26%  Similarity=0.414  Sum_probs=40.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++.|++++|.|+ |++|+.+++.|...|+ +|++++|+.++.++..+++
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            468999999998 9999999999999998 8999999988776555443

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.12  E-value=0.00084  Score=63.42  Aligned_cols=40  Identities=28%  Similarity=0.295  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+| +|++|...++.+...|++|+++++++++++.
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  228 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR  228 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH
Confidence            578999999 8999999999999999999999999887764

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.04  E-value=0.00013  Score=66.41  Aligned_cols=42  Identities=21%  Similarity=0.260  Sum_probs=37.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~   71 (368)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~  155 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFN  155 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence            3567899999997 7999999999999998 8999999987754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.03  E-value=0.00053  Score=64.21  Aligned_cols=39  Identities=23%  Similarity=0.312  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~   71 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~  203 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLA  203 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            7899999999 9999999999888999 9999999987654

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.01  E-value=0.0021  Score=60.03  Aligned_cols=77  Identities=23%  Similarity=0.238  Sum_probs=53.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+|+ |++|...++.+...|++|+.+++++++++.+ +++                    +...   ..|..+.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l--------------------Ga~~---~i~~~~~  220 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL--------------------GAEV---AVNARDT  220 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT--------------------TCSE---EEETTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc--------------------CCCE---EEeCCCc
Confidence            5789999997 8999999999989999999999998877643 222                    2221   2355443


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..+.+    .+..+++|++|.++|.
T Consensus       221 ~~~~~~----~~~~g~~d~vid~~g~  242 (340)
T 3s2e_A          221 DPAAWL----QKEIGGAHGVLVTAVS  242 (340)
T ss_dssp             CHHHHH----HHHHSSEEEEEESSCC
T ss_pred             CHHHHH----HHhCCCCCEEEEeCCC
Confidence            333322    2234689999999873

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.01  E-value=0.006  Score=57.15  Aligned_cols=40  Identities=20%  Similarity=0.216  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++++.
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~  207 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV  207 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            5789999997 899999999888899999999999887654

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.99  E-value=0.0017  Score=60.83  Aligned_cols=117  Identities=9%  Similarity=0.066  Sum_probs=71.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++++|.|+|++|.+|..+|..++..|  .+|+++++++++++....+|.....              ...++.+ .   +
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--------------~~~~i~~-t---~   68 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--------------EGLNLTF-T---S   68 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--------------TTCCCEE-E---S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--------------CCCceEE-c---C
Confidence            45789999999999999999999999  4899999999888877777765200              1112221 1   2


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE-EEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH-IFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~-Iv~is  187 (368)
                      |.   .+.+       ..-|++|.+||...  ++  ..+   -...++.|..-...+.    +.+.+....+. ++++|
T Consensus        69 d~---~~al-------~dADvVvitaG~p~--kp--G~~---R~dLl~~N~~I~~~i~----~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           69 DI---KEAL-------TDAKYIVSSGGAPR--KE--GMT---REDLLKGNAEIAAQLG----KDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             CH---HHHH-------TTEEEEEECCC-----------C---HHHHHHHHHHHHHHHH----HHHHHHCTTCCEEEECS
T ss_pred             CH---HHHh-------CCCCEEEEccCCCC--CC--CCC---HHHHHHHHHHHHHHHH----HHHHHhccCcEEEEEec
Confidence            22   1111       25799999999743  22  122   2345666765554444    44444334564 66664

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.97  E-value=0.014  Score=53.95  Aligned_cols=121  Identities=18%  Similarity=0.199  Sum_probs=74.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC--hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      |+++.+++.|+|+ |.+|.++|..|+..|. +|++.+++  +++.+....++....+..   .        ...++.. .
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~---~--------~~~~i~~-t   70 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQ---G--------FDANIIG-T   70 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHH---T--------CCCCEEE-E
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhc---c--------CCCEEEE-c
Confidence            4456788999997 9999999999999998 99999999  566655555554321100   0        0122221 1


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      .|   .+           .+..-|++|..+|...  ++  ..+.   ...++.|..-.-.+.+.+    .+....+.+++
T Consensus        71 ~d---~~-----------a~~~aDvVIiaag~p~--kp--g~~R---~dl~~~N~~i~~~i~~~i----~~~~p~a~vlv  125 (315)
T 3tl2_A           71 SD---YA-----------DTADSDVVVITAGIAR--KP--GMSR---DDLVATNSKIMKSITRDI----AKHSPNAIIVV  125 (315)
T ss_dssp             SC---GG-----------GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHH----HHHCTTCEEEE
T ss_pred             CC---HH-----------HhCCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHH----HHhCCCeEEEE
Confidence            12   11           2346899999999854  22  2333   345666665444444444    33334677777


Q ss_pred             Ec
Q 017635          186 MD  187 (368)
Q Consensus       186 is  187 (368)
                      +|
T Consensus       126 vs  127 (315)
T 3tl2_A          126 LT  127 (315)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.96  E-value=0.00098  Score=61.89  Aligned_cols=39  Identities=21%  Similarity=0.280  Sum_probs=35.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|+|+||+||+|...++.+...|++|+++++++++++.+
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  190 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL  190 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            799999999999999999989999999999998776543

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.96  E-value=0.0077  Score=56.51  Aligned_cols=40  Identities=20%  Similarity=0.193  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  211 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSK  211 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5789999996 8999999988888999 89999999887654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.91  E-value=0.0026  Score=60.24  Aligned_cols=41  Identities=12%  Similarity=0.189  Sum_probs=35.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  233 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA  233 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            4789999996 8999999998888999 799999998887643

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.90  E-value=0.0045  Score=58.73  Aligned_cols=41  Identities=24%  Similarity=0.294  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+| +|++|...++.+...| ++|+++++++++++.+
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~  236 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA  236 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH
Confidence            478999999 8999999999888899 5999999998876543

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.90  E-value=0.0017  Score=61.22  Aligned_cols=38  Identities=16%  Similarity=0.074  Sum_probs=33.6

Q ss_pred             CC-CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 017635           32 GP-RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   69 (368)
Q Consensus        32 ~~-k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~   69 (368)
                      .| ++|+|+||+|++|...++.+...|++|++++++.++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46 899999999999999998888889999999877665

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.88  E-value=0.002  Score=60.95  Aligned_cols=74  Identities=19%  Similarity=0.209  Sum_probs=53.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|.+|+|+|+ |++|...++.+...|++|+++++++++++.+. ++                    +..   ...|..+.
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l--------------------Ga~---~vi~~~~~  248 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL--------------------GAD---EVVNSRNA  248 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH--------------------TCS---EEEETTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc--------------------CCc---EEeccccH
Confidence            5789999998 89999999988889999999999988876432 22                    111   12356665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +.+++    +.   +++|++|.++|.
T Consensus       249 ~~~~~----~~---~g~Dvvid~~g~  267 (369)
T 1uuf_A          249 DEMAA----HL---KSFDFILNTVAA  267 (369)
T ss_dssp             HHHHT----TT---TCEEEEEECCSS
T ss_pred             HHHHH----hh---cCCCEEEECCCC
Confidence            43322    21   479999999985

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.83  E-value=0.0015  Score=61.82  Aligned_cols=41  Identities=12%  Similarity=0.216  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~  232 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA  232 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            5789999995 8999999998888999 799999998887643

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.83  E-value=0.0019  Score=60.88  Aligned_cols=41  Identities=20%  Similarity=0.290  Sum_probs=35.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+... |++|+++++++++++.+
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~  227 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA  227 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence            5789999999 89999999888888 99999999998876543

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.82  E-value=0.0036  Score=55.96  Aligned_cols=86  Identities=15%  Similarity=0.182  Sum_probs=60.5

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHhhhhhh
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMM   86 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~-------------------~~~~~~~~~l~~~~~~~~~   86 (368)
                      .+.++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+++..     
T Consensus        22 ~q~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-----   95 (251)
T 1zud_1           22 GQQKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN-----   95 (251)
T ss_dssp             HHHHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC-----
T ss_pred             HHHHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC-----
Confidence            344667899999997 6899999999999996 788887653                   56666677766532     


Q ss_pred             hcCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           87 AAGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        87 ~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                                +..++..+..++++ +.+.++++       ..|+||++..
T Consensus        96 ----------p~~~v~~~~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1           96 ----------PDIQLTALQQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ----------TTSEEEEECSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             ----------CCCEEEEEeccCCH-HHHHHHHh-------cCCEEEECCC
Confidence                      23566667666654 44444443       4799998743

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.82  E-value=0.0046  Score=59.24  Aligned_cols=43  Identities=21%  Similarity=0.138  Sum_probs=38.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+.+++|+|+|+ |.+|+.+++.+...|++|++++|+.++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 8999999999999999999999998877653

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.81  E-value=0.011  Score=54.87  Aligned_cols=119  Identities=19%  Similarity=0.200  Sum_probs=71.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++........           ...++.. ..|  
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~-----------~~~~v~~-t~d--   69 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDG-----------FDAKFTG-AND--   69 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHT-----------CCCCEEE-ESS--
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcC-----------CCCEEEE-eCC--
Confidence            34578999998 9999999999999998 999999999887766666654321000           0122221 122  


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                       .+           .+..-|++|..+|...  ++-  .+   -...++.|..-.    +.+.+.+.+....+.++++|
T Consensus        70 -~~-----------a~~~aDiVIiaag~p~--k~G--~~---R~dl~~~N~~i~----~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           70 -YA-----------AIEGADVVIVTAGVPR--KPG--MS---RDDLLGINLKVM----EQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             -GG-----------GGTTCSEEEECCSCCC--C----------CHHHHHHHHHH----HHHHHHHHHHCTTCEEEECC
T ss_pred             -HH-----------HHCCCCEEEEccCcCC--CCC--CC---HHHHHHhhHHHH----HHHHHHHHHHCCCeEEEecC
Confidence             11           1236799999999754  221  12   123455555443    44445454443567777775

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.77  E-value=0.0037  Score=58.34  Aligned_cols=118  Identities=11%  Similarity=0.119  Sum_probs=70.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--e-----EEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD--R-----VVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~--~-----Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +.+|+||||+|.+|..++..|+..|.  +     ++++++++  ++++....+|..-.                ..-...
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~----------------~~~~~~   66 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA----------------LPLLKD   66 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC----------------CTTEEE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh----------------hcccCC
Confidence            45899999999999999999998874  5     99999974  45666666665410                000111


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCc-E
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG-H  182 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g-~  182 (368)
                      +.. -.+.          .+.+...|++|+.||...  .+  ..+   -...++.|+.....+.+.+    .+....+ +
T Consensus        67 ~~~-~~~~----------~~~~~daDvVvitAg~pr--kp--G~t---R~dll~~N~~i~~~i~~~i----~~~~~~~~~  124 (333)
T 5mdh_A           67 VIA-TDKE----------EIAFKDLDVAILVGSMPR--RD--GME---RKDLLKANVKIFKCQGAAL----DKYAKKSVK  124 (333)
T ss_dssp             EEE-ESCH----------HHHTTTCSEEEECCSCCC--CT--TCC---TTTTHHHHHHHHHHHHHHH----HHHSCTTCE
T ss_pred             EEE-cCCc----------HHHhCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHH----HHhCCCCeE
Confidence            111 0111          111236899999999753  22  112   2345677776665555544    4333345 5


Q ss_pred             EEEEcC
Q 017635          183 IFNMDG  188 (368)
Q Consensus       183 Iv~isS  188 (368)
                      ++++|-
T Consensus       125 vivvsN  130 (333)
T 5mdh_A          125 VIVVGN  130 (333)
T ss_dssp             EEECSS
T ss_pred             EEEcCC
Confidence            777653

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.77  E-value=0.0022  Score=60.80  Aligned_cols=41  Identities=12%  Similarity=0.171  Sum_probs=35.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  236 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA  236 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999996 8999999998888999 799999998887543

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.76  E-value=0.006  Score=57.68  Aligned_cols=40  Identities=18%  Similarity=0.248  Sum_probs=34.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      -.|++|+|+||+|++|...++.+...|++|+.+. ++++++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~  202 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD  202 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence            4689999999999999999999999999999886 566654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.74  E-value=0.001  Score=62.77  Aligned_cols=41  Identities=27%  Similarity=0.190  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|++|+.+++++++++.+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~  219 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA  219 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            4789999999 9999999998888999999999998876543

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.74  E-value=0.0011  Score=62.42  Aligned_cols=75  Identities=20%  Similarity=0.127  Sum_probs=52.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++.+.+.+++                    +...   ..|..+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l--------------------Ga~~---vi~~~~~  235 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL--------------------GADD---YVIGSDQ  235 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS--------------------CCSC---EEETTCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc--------------------CCce---eeccccH
Confidence            6889999995 99999999988889999999999987765433221                    2211   1244554


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +.+++       ..+.+|++|.++|.
T Consensus       236 ~~~~~-------~~~g~D~vid~~g~  254 (357)
T 2cf5_A          236 AKMSE-------LADSLDYVIDTVPV  254 (357)
T ss_dssp             HHHHH-------STTTEEEEEECCCS
T ss_pred             HHHHH-------hcCCCCEEEECCCC
Confidence            43322       22479999999985

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.73  E-value=0.017  Score=53.63  Aligned_cols=120  Identities=10%  Similarity=0.091  Sum_probs=75.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +.+.++|.|+|+ |.+|.++|..|+.+|.  +|++.++++++++....+|.....-             ....-.....|
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~-------------~~~~~i~~~~d   81 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLF-------------LKTPKIVSSKD   81 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------CSCCEEEECSS
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhc-------------cCCCeEEEcCC
Confidence            456788999997 8999999999999996  8999999999888888887652110             11111111222


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                         .++           +..-|++|..||...  ++  ..+.   .+.++.|.-=...+.+.    +.+....+.++++|
T Consensus        82 ---~~~-----------~~~aDiVvi~aG~~~--kp--G~tR---~dL~~~N~~I~~~i~~~----i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           82 ---YSV-----------TANSKLVIITAGARQ--QE--GESR---LNLVQRNVNIFKFIIPN----VVKYSPQCKLLIVS  136 (331)
T ss_dssp             ---GGG-----------GTTEEEEEECCSCCC--CT--TCCG---GGGHHHHHHHHHHHHHH----HHHHCTTCEEEECS
T ss_pred             ---HHH-----------hCCCCEEEEccCCCC--CC--CccH---HHHHHHHHHHHHHHHHH----HHHHCCCeEEEEec
Confidence               221           236899999999754  22  1222   23556665544444444    44333567787775


Q ss_pred             C
Q 017635          188 G  188 (368)
Q Consensus       188 S  188 (368)
                      -
T Consensus       137 N  137 (331)
T 4aj2_A          137 N  137 (331)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.73  E-value=0.031  Score=51.10  Aligned_cols=115  Identities=16%  Similarity=0.195  Sum_probs=72.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++......-           ....++.. ..|   .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~-----------~~~~~i~~-t~d---~~   65 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI-----------DKYPKIVG-GAD---YS   65 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT-----------TCCCEEEE-ESC---GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc-----------CCCCEEEE-eCC---HH
Confidence            5889999 9999999999999987  89999999988765555554322100           01122221 112   22


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      .           +..-|++|..+|...  ++  ..+..   ..++.|.    .+.+.+.+.+.+....+.++++|
T Consensus        66 a-----------~~~aDiVViaag~~~--kp--G~~R~---dl~~~N~----~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           66 L-----------LKGSEIIVVTAGLAR--KP--GMTRL---DLAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             G-----------GTTCSEEEECCCCCC--CS--SCCHH---HHHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             H-----------hCCCCEEEECCCCCC--CC--CCcHH---HHHHHHH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            2           235799999999754  22  23333   3355553    34555666666665567777775

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.73  E-value=0.0035  Score=59.14  Aligned_cols=42  Identities=14%  Similarity=0.238  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLL-SGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~-~G~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+||+|++|...++.+.. .|++|+++++++++++.+
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~  213 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV  213 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence            578999999999999988876655 589999999998876543

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.72  E-value=0.002  Score=61.00  Aligned_cols=41  Identities=15%  Similarity=0.221  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|||+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~  231 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA  231 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence            4789999996 8999999988888998 799999998887643

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.71  E-value=0.0017  Score=61.53  Aligned_cols=39  Identities=23%  Similarity=0.326  Sum_probs=34.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~   71 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++.+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~  221 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR  221 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            4789999998 8999999998888999 8999999888765

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.69  E-value=0.0015  Score=59.56  Aligned_cols=44  Identities=18%  Similarity=0.185  Sum_probs=39.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~L  162 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI  162 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4678999999997 6999999999999998 899999999886654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.68  E-value=0.0053  Score=58.25  Aligned_cols=42  Identities=19%  Similarity=0.294  Sum_probs=36.7

Q ss_pred             CCCeEEEEc-CCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITG-STRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITG-as~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .|.+|+|.| |+|++|...++.+...|++|+.+++++++++.+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~  212 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLL  212 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence            578899997 899999999998888999999999998876543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.68  E-value=0.002  Score=60.20  Aligned_cols=41  Identities=20%  Similarity=0.166  Sum_probs=36.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS--GDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~--G~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...  |++|+.+++++++.+.+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~  212 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA  212 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH
Confidence            6899999999 89999999888888  99999999998876543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.62  E-value=0.0013  Score=62.43  Aligned_cols=40  Identities=25%  Similarity=0.251  Sum_probs=35.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~  233 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET  233 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence            4789999998 9999999998888998 89999999888763

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.59  E-value=0.033  Score=51.75  Aligned_cols=51  Identities=16%  Similarity=0.097  Sum_probs=41.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      .|..+.++|.|.|| |.+|.++|..|+..|. +|++.++++++++....++..
T Consensus         4 ~~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~   55 (331)
T 1pzg_A            4 ALVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   55 (331)
T ss_dssp             CCCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHh
Confidence            34444568999998 8999999999999997 999999999888775555544

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.59  E-value=0.0026  Score=59.61  Aligned_cols=41  Identities=22%  Similarity=0.261  Sum_probs=36.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~  216 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA  216 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence            5889999997 8999999999889999999999998887643

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.57  E-value=0.0041  Score=59.54  Aligned_cols=40  Identities=25%  Similarity=0.316  Sum_probs=35.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  253 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNL  253 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            5789999998 8999999988888999 89999999887653

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.57  E-value=0.05  Score=50.42  Aligned_cols=117  Identities=14%  Similarity=0.083  Sum_probs=73.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..+++.|+|+ |.+|..+|..|+..|.  +|++.++++++++....+|.....-            ....++. ...|..
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~------------~~~~~i~-~t~d~~   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF------------LHTAKIV-SGKDYS   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG------------SCCSEEE-EESSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc------------ccCCeEE-EcCCHH
Confidence            4578999998 9999999999999996  8999999999888777777653210            0112222 233433


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +              +..-|++|..||...  ++-  .+.   .+.+..|..-    .+.+.+.+.+....+.++++|
T Consensus        86 ~--------------~~daDiVIitaG~p~--kpG--~tR---~dll~~N~~I----~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           86 V--------------SAGSKLVVITAGARQ--QEG--ESR---LNLVQRNVNI----FKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             S--------------CSSCSEEEECCSCCC--CSS--CCT---TGGGHHHHHH----HHHHHHHHHHHCTTCEEEECS
T ss_pred             H--------------hCCCCEEEEeCCCCC--CCC--CCH---HHHHHhhHHH----HHHHHHHHHhhCCCceEEeCC
Confidence            2              236899999999854  221  121   1233444433    344444444443567777775

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.55  E-value=0.002  Score=59.64  Aligned_cols=35  Identities=17%  Similarity=0.230  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      .|++|+|+||+|++|...++.+...|++|+.++++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~  186 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK  186 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc
Confidence            57899999999999999999999999999988754

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=96.54  E-value=0.0068  Score=56.02  Aligned_cols=114  Identities=19%  Similarity=0.237  Sum_probs=67.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|.|+||+|.+|..++..|+..|  .+|++.++++  .+....++.+..               ...++.....    .+
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~---------------~~~~l~~~~~----t~   60 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE---------------TRATVKGYLG----PE   60 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS---------------SSCEEEEEES----GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC---------------cCceEEEecC----CC
Confidence            58999999999999999999988  6899999987  233333432200               1112322210    11


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +.++++       ...|++|+.+|...  .+  ..+..   ..+..|+.....+.+.+.++    ...+.++++|
T Consensus        61 d~~~a~-------~~aDvVvi~ag~~~--~~--g~~r~---dl~~~n~~i~~~i~~~i~~~----~p~a~viv~s  117 (314)
T 1mld_A           61 QLPDCL-------KGCDVVVIPAGVPR--KP--GMTRD---DLFNTNATIVATLTAACAQH----CPDAMICIIS  117 (314)
T ss_dssp             GHHHHH-------TTCSEEEECCSCCC--CT--TCCGG---GGHHHHHHHHHHHHHHHHHH----CTTSEEEECS
T ss_pred             CHHHHh-------CCCCEEEECCCcCC--CC--CCcHH---HHHHHHHHHHHHHHHHHHhh----CCCeEEEEEC
Confidence            222222       36899999999854  21  12211   23566666555555554443    3467888874

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.53  E-value=0.003  Score=55.53  Aligned_cols=72  Identities=19%  Similarity=0.114  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .++++|.|+ |.+|+.+++.|.++|+ |++++++++..+...                        ..+.++..|.++++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~------------------------~~~~~i~gd~~~~~   62 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR------------------------SGANFVHGDPTRVS   62 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH------------------------TTCEEEESCTTCHH
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh------------------------cCCeEEEcCCCCHH
Confidence            357899997 7999999999999999 999999988764332                        13567899999988


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      .++++      ...+.|.+|.+.+
T Consensus        63 ~l~~a------~i~~ad~vi~~~~   80 (234)
T 2aef_A           63 DLEKA------NVRGARAVIVDLE   80 (234)
T ss_dssp             HHHHT------TCTTCSEEEECCS
T ss_pred             HHHhc------CcchhcEEEEcCC
Confidence            66553      1236799987653

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.53  E-value=0.0037  Score=56.42  Aligned_cols=41  Identities=37%  Similarity=0.398  Sum_probs=38.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la  158 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ  158 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            899999996 89999999999999999999999999887766

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.49  E-value=0.038  Score=51.10  Aligned_cols=117  Identities=17%  Similarity=0.221  Sum_probs=71.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .++|.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.......           ....++.. ..|   .
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~-----------~~~~~v~~-t~d---~   68 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIE-----------GVDFKVRG-TND---Y   68 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHH-----------TCCCCEEE-ESC---G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhc-----------CCCcEEEE-cCC---H
Confidence            467888995 8999999999999987 99999999988776666665421100           00122221 112   2


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           .+..-|++|+.+|...  ++  ..+..   ..+..|..-...+    .+.+.+....+.+++++
T Consensus        69 ~-----------a~~~aDvVIi~ag~p~--k~--G~~R~---dl~~~N~~i~~~i----~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           69 K-----------DLENSDVVIVTAGVPR--KP--GMSRD---DLLGINIKVMQTV----GEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             G-----------GGTTCSEEEECCSCCC--CT--TCCHH---HHHHHHHHHHHHH----HHHHHHHCTTCEEEECC
T ss_pred             H-----------HHCCCCEEEEcCCcCC--CC--CCCHH---HHHHHhHHHHHHH----HHHHHHHCCCcEEEEec
Confidence            1           1235799999999754  22  22333   3455555444444    44444433467777774

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.48  E-value=0.0053  Score=52.92  Aligned_cols=42  Identities=36%  Similarity=0.502  Sum_probs=36.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      +++|+||+|.+|.++++.|++.|++|++.+|++++.++..++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998877665443

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.48  E-value=0.003  Score=59.72  Aligned_cols=41  Identities=12%  Similarity=0.180  Sum_probs=35.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  232 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA  232 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            4789999996 8999999988888898 799999998887543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.47  E-value=0.0042  Score=58.35  Aligned_cols=41  Identities=17%  Similarity=0.186  Sum_probs=33.9

Q ss_pred             CCCCeEEEEcCCChHHHHH-HHHH-HHCCCe-EEEEeCChH---HHHH
Q 017635           31 AGPRNVVITGSTRGLGKAL-AREF-LLSGDR-VVVASRSSE---SVRM   72 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~ai-a~~l-a~~G~~-Vil~~R~~~---~~~~   72 (368)
                      +++++|+|+|+ |++|... ++.+ ...|++ |+.++++++   +++.
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~  217 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI  217 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence            34489999999 9999999 7776 678997 999999887   6653

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.45  E-value=0.038  Score=50.01  Aligned_cols=45  Identities=20%  Similarity=0.278  Sum_probs=39.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      ++|.|.|+ |.+|.++|+.|++.|++|++.+|+++++++..+.+..
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~   49 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEG   49 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHH
Confidence            67888885 7899999999999999999999999988877766543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.44  E-value=0.073  Score=49.09  Aligned_cols=117  Identities=23%  Similarity=0.253  Sum_probs=72.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +..+|.|+|+ |.+|..++..|+.+|  ..|++.++++++++....++....+.             .+..+.... |  
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~-------------~~~~~~v~~-~--   67 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPY-------------SPTTVRVKA-G--   67 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGG-------------SSSCCEEEE-C--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhh-------------cCCCeEEEe-C--
Confidence            4468999998 999999999999888  48999999988887666666542110             112222222 2  


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +.+.           +..-|++|..+|...  .+  ..+.+   ..+..|.-    +.+.+.+.+.+....+.|+++|
T Consensus        68 ~~~a-----------~~~aDvVvi~ag~~~--~~--g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~viv~t  123 (317)
T 3d0o_A           68 EYSD-----------CHDADLVVICAGAAQ--KP--GETRL---DLVSKNLK----IFKSIVGEVMASKFDGIFLVAT  123 (317)
T ss_dssp             CGGG-----------GTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred             CHHH-----------hCCCCEEEECCCCCC--CC--CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEec
Confidence            2221           236899999999854  22  22322   23444444    3444455555544567777764

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.38  E-value=0.028  Score=51.90  Aligned_cols=115  Identities=12%  Similarity=0.140  Sum_probs=70.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++++++....++......             ..........|  +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~-------------~~~~~~v~~~~--~~~   65 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI-------------HGFDTRVTGTN--DYG   65 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH-------------HTCCCEEEEES--SSG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc-------------cCCCcEEEECC--CHH
Confidence            5788996 9999999999999886  8999999998877666666542211             01112222112  111


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                                 .+..-|++|..||...  ++  ..+   -...++.|..    +.+.+.+.+.+....+.++++|
T Consensus        66 -----------a~~~aDvVii~ag~~~--kp--G~~---R~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           66 -----------PTEDSDVCIITAGLPR--SP--GMS---RDDLLAKNTE----IVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             -----------GGTTCSEEEECCCC--------------CHHHHHHHHH----HHHHHHHHHHTTCTTCEEEECC
T ss_pred             -----------HhCCCCEEEECCCCCC--CC--CCC---HHHHHHhhHH----HHHHHHHHHHHhCCCcEEEecC
Confidence                       2346899999999753  22  111   2334555553    3455566666555567777775

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.31  E-value=0.027  Score=53.24  Aligned_cols=42  Identities=12%  Similarity=0.062  Sum_probs=37.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +.+++|+|.|+ |.+|..+++.+...|++|++.+|+.++++.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  223 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQV  223 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            47899999998 6999999999999999999999999887654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.21  E-value=0.013  Score=55.78  Aligned_cols=41  Identities=22%  Similarity=0.243  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|.|+ |++|...++.+...|+ +|+++++++++++.+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a  226 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA  226 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH
Confidence            5789999995 9999999988888998 689999998876543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.19  E-value=0.013  Score=55.20  Aligned_cols=41  Identities=10%  Similarity=0.161  Sum_probs=34.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+.+++++++++.+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a  231 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA  231 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence            4789999995 8999999988888898 699999998876543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.17  E-value=0.0046  Score=57.95  Aligned_cols=40  Identities=13%  Similarity=0.106  Sum_probs=34.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|++|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~  206 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI  206 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH
Confidence            4789999995 8999999988888998 79999999887653

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.16  E-value=0.023  Score=52.80  Aligned_cols=50  Identities=14%  Similarity=0.276  Sum_probs=40.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEEN   80 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~-------------------~~~~~~~~~l~~~   80 (368)
                      ++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+.+.+++.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i  100 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI  100 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh
Confidence            567899999996 6999999999999995 788888753                   4666666666664

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.16  E-value=0.009  Score=56.83  Aligned_cols=43  Identities=14%  Similarity=0.108  Sum_probs=38.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+.+++|+|+|+ |++|+.+++.+...|++|++.+|+.++++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            568999999996 7999999999999999999999998876543

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.13  E-value=0.011  Score=55.63  Aligned_cols=46  Identities=24%  Similarity=0.343  Sum_probs=40.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      +++||+|+|.|. |.+|..+|+.|.+.|++|++.+++.+++++..++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999996 7899999999999999999999998877665544

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.13  E-value=0.0053  Score=57.69  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .|++|||+||+|++|...++.+...|++++++.++.+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5789999999999999999888888999888776543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.09  E-value=0.021  Score=54.40  Aligned_cols=40  Identities=25%  Similarity=0.394  Sum_probs=34.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|++|+|.|+ |++|...++.+...|+ +|+.+++++++++.
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  225 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL  225 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            5789999997 9999999988888898 89999999887654

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.04  E-value=0.021  Score=53.21  Aligned_cols=40  Identities=18%  Similarity=0.287  Sum_probs=34.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~   72 (368)
                      .|++++|+|+ |++|...++.+... |++|+.+++++++++.
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~  211 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLAL  211 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence            5789999998 99999988777666 7899999999887764

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.00  E-value=0.055  Score=52.78  Aligned_cols=43  Identities=12%  Similarity=0.098  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCChHHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLS-----GDRVVVASRSSESVRMTV   74 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~-----G~~Vil~~R~~~~~~~~~   74 (368)
                      +.++|.|.||+++.|.+++..|+.+     +.+|++.++++++++...
T Consensus        27 ~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~   74 (472)
T 1u8x_X           27 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA   74 (472)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHH
Confidence            4457889999888899899999988     668999999998877754

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.97  E-value=0.086  Score=48.84  Aligned_cols=116  Identities=18%  Similarity=0.236  Sum_probs=71.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +..+|.|+|+ |.+|..++..|+..+.  +|++.++++++++....++.....              ....+.+.. |  
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~i~~-~--   69 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP--------------FTSPKKIYS-A--   69 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--------------GSCCCEEEE-C--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH--------------hcCCeEEEE-C--
Confidence            4468999998 9999999999998874  899999999888877777654210              012222222 2  


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +.++           +..-|++|..+|...  .+  ..+.+   ..+..|..-.    +.+.+.+.+....+.|+++|
T Consensus        70 ~~~a-----------~~~aDvVii~ag~~~--k~--g~~R~---dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           70 EYSD-----------AKDADLVVITAGAPQ--KP--GETRL---DLVNKNLKIL----KSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             CGGG-----------GGGCSEEEECCCCC---------CHH---HHHHHHHHHH----HHHHHHHHHHTCCSEEEECS
T ss_pred             CHHH-----------hCCCCEEEEcCCCCC--CC--CCCHH---HHHHHHHHHH----HHHHHHHHHHCCCeEEEEeC
Confidence            2222           235799999999754  22  12322   3345555444    44444444433567888874

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.95  E-value=0.078  Score=49.47  Aligned_cols=121  Identities=13%  Similarity=0.123  Sum_probs=69.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHA   99 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   99 (368)
                      -++++-+|.|+||+|+||+.++..|+....       .+.+.+.++.  +++-..-+|..-.               ...
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~---------------~~~   84 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA---------------FPL   84 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT---------------CTT
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC---------------ccC
Confidence            345566899999999999999999987542       6889998653  3444455554310               011


Q ss_pred             eeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-C
Q 017635          100 KVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-P  178 (368)
Q Consensus       100 ~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~  178 (368)
                      ....+..+  |..          +.+..-|++|..||...  +|  .++.+   +.++.|..=.    +.+.+.+.+. .
T Consensus        85 ~~~~~~~~--~~~----------~a~~~advVvi~aG~pr--kp--GmtR~---DLl~~Na~I~----~~~~~~i~~~a~  141 (345)
T 4h7p_A           85 LDKVVVTA--DPR----------VAFDGVAIAIMCGAFPR--KA--GMERK---DLLEMNARIF----KEQGEAIAAVAA  141 (345)
T ss_dssp             EEEEEEES--CHH----------HHTTTCSEEEECCCCCC--CT--TCCHH---HHHHHHHHHH----HHHHHHHHHHSC
T ss_pred             CCcEEEcC--ChH----------HHhCCCCEEEECCCCCC--CC--CCCHH---HHHHHhHHHH----HHHHHHHHhhcc
Confidence            11122211  221          12346899999999854  22  24443   4566676544    4444444432 2


Q ss_pred             CCcEEEEEc
Q 017635          179 KGGHIFNMD  187 (368)
Q Consensus       179 ~~g~Iv~is  187 (368)
                      +...|+.+|
T Consensus       142 ~~~~vlvvs  150 (345)
T 4h7p_A          142 SDCRVVVVG  150 (345)
T ss_dssp             TTCEEEECS
T ss_pred             CceEEEEeC
Confidence            344555554

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.91  E-value=0.024  Score=54.46  Aligned_cols=40  Identities=25%  Similarity=0.385  Sum_probs=34.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +.+|+|.|. |-+|+.+++.|.++|..|++++++++..+.+
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~   43 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETL   43 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence            356899997 6799999999999999999999999877654

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.88  E-value=0.0093  Score=56.05  Aligned_cols=84  Identities=23%  Similarity=0.356  Sum_probs=61.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHhhhhhhh
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMA   87 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~-------------------~~~~~~~~~l~~~~~~~~~~   87 (368)
                      +.++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .|.+.+.+.+.+.+      
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n------  185 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRN------  185 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC------
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHC------
Confidence            44667899999997 7999999999999995 799998863                   35566666666543      


Q ss_pred             cCCCCcccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635           88 AGGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus        88 ~~~~~~~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                               +..++..+..++++..++.       + +.+.|+||.+.
T Consensus       186 ---------p~v~v~~~~~~i~~~~~~~-------~-~~~~DlVvd~~  216 (353)
T 3h5n_A          186 ---------SEISVSEIALNINDYTDLH-------K-VPEADIWVVSA  216 (353)
T ss_dssp             ---------TTSEEEEEECCCCSGGGGG-------G-SCCCSEEEECC
T ss_pred             ---------CCCeEEEeecccCchhhhh-------H-hccCCEEEEec
Confidence                     3467788888887654322       2 45789999865

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.87  E-value=0.034  Score=52.96  Aligned_cols=43  Identities=9%  Similarity=0.039  Sum_probs=37.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+.+.+|+|.|+ |.+|..+++.+...|++|++.+++.++++.+
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~  229 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQV  229 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            356789999998 6999999999999999999999999876554

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.86  E-value=0.029  Score=55.99  Aligned_cols=91  Identities=12%  Similarity=0.149  Sum_probs=60.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh-------------------HHHHHHHHHHHHHhhhhhhhcC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSS-------------------ESVRMTVTELEENLKEGMMAAG   89 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~-------------------~~~~~~~~~l~~~~~~~~~~~~   89 (368)
                      ++++++|+|.|+ ||+|.++|+.|+..|. ++.+++++.                   .|.+.+.+.+++..        
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN--------  393 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF--------  393 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC--------
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC--------
Confidence            567899999996 5999999999999995 799998864                   46666777776643        


Q ss_pred             CCCcccccCceeEEEeccC-------CCHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635           90 GSSKKNLVHAKVAGIACDV-------CEPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus        90 ~~~~~~~~~~~v~~~~~Dv-------~~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                             +..++..+..++       ++.+....-.+.+.+.+...|+||++..
T Consensus       394 -------P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          394 -------PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             -------TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             -------CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence                   345676666554       2321111111112222235799998764

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.82  E-value=0.042  Score=49.59  Aligned_cols=178  Identities=17%  Similarity=0.166  Sum_probs=91.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-CCCeEE-EEeCChHHHHHHHHHHHHHhh--hhhhhcCCCCcccccCceeEEEeccCC
Q 017635           34 RNVVITGSTRGLGKALAREFLL-SGDRVV-VASRSSESVRMTVTELEENLK--EGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~-~G~~Vi-l~~R~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      -+|+|+|++|.+|+.+++.+.+ .|++|+ +++++.++..  .+++.+...  ........+......  .+. +..|++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~--g~d~~~~~g~~~~~v~~~~dl~~~l~--~~D-vVIDft   80 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLL--GSDAGELAGAGKTGVTVQSSLDAVKD--DFD-VFIDFT   80 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTC--SCCTTCSSSSSCCSCCEESCSTTTTT--SCS-EEEECS
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhh--hhhHHHHcCCCcCCceecCCHHHHhc--CCC-EEEEcC
Confidence            4799999999999999999885 467776 5566543210  000000000  000000000000001  122 355899


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHh----------hch----HHHHHHHHHHHHHH
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVST----------NLV----GSILCTREAMRVMR  175 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~v----------N~~----g~~~l~~~~lp~m~  175 (368)
                      .++.....+..+.+.  ++++++-..|.          +.++.++..+.          |+-    -.+.+++.+.++|.
T Consensus        81 ~p~~~~~~~~~a~~~--G~~vVigTtG~----------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~  148 (273)
T 1dih_A           81 RPEGTLNHLAFCRQH--GKGMVIGTTGF----------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMG  148 (273)
T ss_dssp             CHHHHHHHHHHHHHT--TCEEEECCCCC----------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHhC--CCCEEEECCCC----------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcC
Confidence            999988888877765  67888766653          22333332221          111    13345555555553


Q ss_pred             cCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHh---------------CCCCeEEEEEecCcc
Q 017635          176 DQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKES---------------KRSKVGVHTASPGMV  235 (368)
Q Consensus       176 ~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~---------------~~~gI~v~~v~PG~v  235 (368)
                      .   +-.|=.+= . .  ....--.+|+.++.-.+.+.+.+...+               .+.+|.|++++-|.+
T Consensus       149 ~---~~dieiiE-~-H--h~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~v  216 (273)
T 1dih_A          149 D---YTDIEIIE-A-H--HRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDI  216 (273)
T ss_dssp             T---TSEEEEEE-E-E--CTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTC
T ss_pred             C---CCCEEEEE-e-e--cCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCC
Confidence            1   11222221 1 1  112223568888887777766654322               135788888885544

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.80  E-value=0.027  Score=52.12  Aligned_cols=115  Identities=18%  Similarity=0.223  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ..+|.|+|+ |.+|..++..|+..|.  +|++.+.++++++....++.+...              ....+... .  .+
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~i~-~--~~   68 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--------------FMGQMSLY-A--GD   68 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--------------CTTCEEEC-----C
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHH--------------hcCCeEEE-E--CC
Confidence            457889998 9999999999999986  899999998777655555532100              00122111 1  12


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      .+           .+..-|++|..+|...  .+  ..+.   ...+..|..-...+++.+.++    ...+.|+++|
T Consensus        69 ~~-----------a~~~aDvVii~~g~p~--k~--g~~r---~dl~~~n~~i~~~i~~~i~~~----~p~a~viv~t  123 (318)
T 1y6j_A           69 YS-----------DVKDCDVIVVTAGANR--KP--GETR---LDLAKKNVMIAKEVTQNIMKY----YNHGVILVVS  123 (318)
T ss_dssp             GG-----------GGTTCSEEEECCCC----------CH---HHHHHHHHHHHHHHHHHHHHH----CCSCEEEECS
T ss_pred             HH-----------HhCCCCEEEEcCCCCC--CC--CcCH---HHHHHhhHHHHHHHHHHHHHh----CCCcEEEEec
Confidence            11           1346899999999753  21  1222   234566666555555555444    2466777753

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.79  E-value=0.12  Score=47.11  Aligned_cols=114  Identities=14%  Similarity=0.195  Sum_probs=72.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE-eccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dv~~~  111 (368)
                      +|.|+|+ |++|..+|..|+.++  .++++.+.++++.+-.+.+|......             .+...... ..|.   
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~-------------~~~~~~i~~~~d~---   64 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------------IDKYPKIVGGADY---   64 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG-------------GTCCCEEEEESCG---
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc-------------CCCCCeEecCCCH---
Confidence            4778895 999999999999887  47999999998877777777653211             01111122 2232   


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++           +..-|++|..||...  +|  .++.+   +.++.|..    +.+.+.+.+.+....+.++.+|
T Consensus        65 ~~-----------~~~aDvVvitAG~pr--kp--GmtR~---dLl~~Na~----I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           65 SL-----------LKGSEIIVVTAGLAR--KP--GMTRL---DLAHKNAG----IIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GG-----------GTTCSEEEECCCCCC--CS--SSCHH---HHHHHHHH----HHHHHHHHHHTTSTTCEEEECS
T ss_pred             HH-----------hCCCCEEEEecCCCC--CC--CCchH---HHHHHHHH----HHHHHHHHHHhcCCceEEEEec
Confidence            21           235799999999864  22  23443   35666654    4555666666665566666664

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.75  E-value=0.13  Score=47.14  Aligned_cols=113  Identities=18%  Similarity=0.150  Sum_probs=70.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|.|+|+ |.+|..++..|+..+  .+|++.++++++++....++.....              ....+.+.. |  +.+
T Consensus         2 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~--------------~~~~~~v~~-~--~~~   63 (310)
T 2xxj_A            2 KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP--------------FAHPVWVWA-G--SYG   63 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG--------------GSCCCEEEE-C--CGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh--------------hcCCeEEEE-C--CHH
Confidence            6889998 999999999999987  5899999999888876666654210              001222222 2  222


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           +..-|++|..+|...  .+  ..+.+   ..+..|.--.    +.+.+.+.+....+.|+++|
T Consensus        64 a-----------~~~aD~Vii~ag~~~--~~--g~~r~---dl~~~n~~i~----~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           64 D-----------LEGARAVVLAAGVAQ--RP--GETRL---QLLDRNAQVF----AQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             G-----------GTTEEEEEECCCCCC--CT--TCCHH---HHHHHHHHHH----HHHHHHHHHHCTTCEEEECS
T ss_pred             H-----------hCCCCEEEECCCCCC--CC--CcCHH---HHHHhhHHHH----HHHHHHHHHHCCCcEEEEec
Confidence            2           236899999999754  22  22333   2345554443    44444444433567888774

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.70  E-value=0.17  Score=46.70  Aligned_cols=114  Identities=18%  Similarity=0.237  Sum_probs=69.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .+|.|+|+ |.+|..++..|+..+.  +|++.++++++++....++.....              ....+.+.. |  +.
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--------------~~~~~~v~~-~--~~   67 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA--------------FTAPKKIYS-G--EY   67 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG--------------GSCCCEEEE-C--CG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHH--------------hcCCeEEEE-C--CH
Confidence            57999998 9999999999998875  899999999888877777754211              011222222 2  21


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           .+..-|++|..+|...  .+  ..+.   ...+..|..    +.+.+.+.+.+....+.|+++|
T Consensus        68 ~-----------a~~~aDvVii~ag~~~--~~--g~~R---~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           68 S-----------DCKDADLVVITAGAPQ--KP--GESR---LDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             G-----------GGTTCSEEEECCCC-----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECS
T ss_pred             H-----------HhCCCCEEEECCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeC
Confidence            2           1346899999999754  21  1111   123344433    4455556666555677888874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.68  E-value=0.015  Score=53.71  Aligned_cols=40  Identities=23%  Similarity=0.284  Sum_probs=35.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++ |+|+||+|++|...++.+...|++|+.+++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999999999999999999998887644

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=95.67  E-value=0.16  Score=49.68  Aligned_cols=47  Identities=19%  Similarity=0.328  Sum_probs=39.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEEN   80 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~   80 (368)
                      -++|.|.|+ |-+|..+|..|++.|++|++.+|+++++++..+.+.+.
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~   51 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHAR   51 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHH
Confidence            356777775 79999999999999999999999999998887766543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.64  E-value=0.0091  Score=55.31  Aligned_cols=39  Identities=26%  Similarity=0.370  Sum_probs=34.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      +|+|+||+||+|...++.+...|++|+++++++++++.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999999888999999999998776543

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.61  E-value=0.23  Score=45.70  Aligned_cols=46  Identities=13%  Similarity=0.209  Sum_probs=37.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      .++|.|+|+ |.+|..++..|+..|.  +|++.++++++++....++..
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~   53 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH   53 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHH
Confidence            468999998 9999999999998774  899999998876655555544

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=95.61  E-value=0.13  Score=47.56  Aligned_cols=45  Identities=13%  Similarity=0.123  Sum_probs=38.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      ++|.|.|| |.+|.++|..|+..|. +|++.++++++++....++..
T Consensus        15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~   60 (328)
T 2hjr_A           15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNH   60 (328)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHh
Confidence            57999998 8999999999999998 999999999888765555543

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.61  E-value=0.013  Score=52.97  Aligned_cols=43  Identities=21%  Similarity=0.356  Sum_probs=38.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .+++||+++|.|+++-+|+.+|+.|+++|++|.++.|+...++
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~  198 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS  198 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            5789999999999999999999999999999999988765554

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.59  E-value=0.13  Score=47.37  Aligned_cols=114  Identities=15%  Similarity=0.173  Sum_probs=69.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-C--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLLS-G--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~-G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|.|+||+|.+|.+++..|+.+ +  .+++++++++ +.+....++...  .             ...++..+.. -.+.
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~--~-------------~~~~v~~~~~-~~~~   64 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI--P-------------TAVKIKGFSG-EDAT   64 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS--C-------------SSEEEEEECS-SCCH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC--C-------------CCceEEEecC-CCcH
Confidence            5889999999999999999875 5  5799999987 444444444321  0             1122322211 1223


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ...|++|..||...  ++  ..+.   .+.++.|..-...+.+.+..+    ...+.++++|
T Consensus        65 ~~~-----------~~aDivii~ag~~r--kp--G~~R---~dll~~N~~I~~~i~~~i~~~----~p~a~vlvvt  118 (312)
T 3hhp_A           65 PAL-----------EGADVVLISAGVAR--KP--GMDR---SDLFNVNAGIVKNLVQQVAKT----CPKACIGIIT  118 (312)
T ss_dssp             HHH-----------TTCSEEEECCSCSC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHH----CTTSEEEECS
T ss_pred             HHh-----------CCCCEEEEeCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHH----CCCcEEEEec
Confidence            322           36899999999754  22  2333   446666765555555544433    3467777775

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.57  E-value=0.024  Score=50.81  Aligned_cols=46  Identities=22%  Similarity=0.235  Sum_probs=39.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      .++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.++..++
T Consensus       113 ~~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~  158 (263)
T 2d5c_A          113 IPLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEE  158 (263)
T ss_dssp             CCCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             CCCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence            36788 9999996 7899999999999999999999998877665543

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.56  E-value=0.0077  Score=56.05  Aligned_cols=71  Identities=20%  Similarity=0.137  Sum_probs=54.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .++++|.|+ |.+|+.++++|.++|. |+++++++++.+ ..    +                   ..+.++..|.+|++
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~-------------------~~~~~i~gd~~~~~  168 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R-------------------SGANFVHGDPTRVS  168 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H-------------------TTCEEEESCTTSHH
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h-------------------CCcEEEEeCCCCHH
Confidence            458999996 7999999999999999 999999988765 21    1                   24667899999998


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEcc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      .++++      ...+.|.+|...
T Consensus       169 ~L~~a------~i~~a~~vi~~~  185 (336)
T 1lnq_A          169 DLEKA------NVRGARAVIVDL  185 (336)
T ss_dssp             HHHHT------CSTTEEEEEECC
T ss_pred             HHHhc------ChhhccEEEEcC
Confidence            87754      123578888754

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.55  E-value=0.0069  Score=55.93  Aligned_cols=40  Identities=13%  Similarity=0.157  Sum_probs=36.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .++.||+++|.|++.=+|+-+|+.|+..|++|.+++|+..
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~  212 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI  212 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchH
Confidence            3789999999998888899999999999999999999743

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.53  E-value=0.0091  Score=54.01  Aligned_cols=43  Identities=16%  Similarity=0.353  Sum_probs=37.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++++++++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            567899999996 6999999999999999999999998776543

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.52  E-value=0.098  Score=48.04  Aligned_cols=45  Identities=16%  Similarity=0.127  Sum_probs=37.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      ++|.|+|+ |.+|..++..|+..|. +|++.++++++++....++.+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~   48 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYE   48 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHH
Confidence            47999998 9999999999999996 899999998887765555543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.50  E-value=0.029  Score=51.33  Aligned_cols=42  Identities=29%  Similarity=0.353  Sum_probs=37.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..+.+++++|.|+ |+||+++++.+...|++|++.+|+.++.+
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~  194 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLA  194 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence            4688999999996 89999999999999999999999987654

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.43  E-value=0.03  Score=55.88  Aligned_cols=64  Identities=13%  Similarity=0.245  Sum_probs=48.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC-------------------hHHHHHHHHHHHHHhhhhhhhc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS-------------------SESVRMTVTELEENLKEGMMAA   88 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~-------------------~~~~~~~~~~l~~~~~~~~~~~   88 (368)
                      .++++++|+|.|+ ||+|.++|+.|+..|. ++.+++.+                   ..|.+.+.+.+++..       
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iN-------  394 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF-------  394 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHC-------
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHC-------
Confidence            3567899999995 5999999999999996 78898654                   257777777777643       


Q ss_pred             CCCCcccccCceeEEEeccC
Q 017635           89 GGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        89 ~~~~~~~~~~~~v~~~~~Dv  108 (368)
                              +..++..+..++
T Consensus       395 --------P~v~v~~~~~~I  406 (598)
T 3vh1_A          395 --------PLMDATGVKLSI  406 (598)
T ss_dssp             --------TTCEEEEECCCC
T ss_pred             --------CCcEEEEEeccc
Confidence                    345677776654

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.41  E-value=0.024  Score=52.70  Aligned_cols=40  Identities=20%  Similarity=0.234  Sum_probs=32.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVR   71 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~   71 (368)
                      ..|.+++|.|+ +|+|...+..+... |++|+.+++++++++
T Consensus       162 ~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~  202 (348)
T 4eez_A          162 KPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLN  202 (348)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHH
T ss_pred             CCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhh
Confidence            35789999987 77888777777765 689999999988764

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=95.38  E-value=0.022  Score=50.62  Aligned_cols=77  Identities=13%  Similarity=0.244  Sum_probs=55.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +|+|.|++|.+|+.+++.+.+. +++|+.+....+.+++...                     ...+   +..|++.++.
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~---------------------~~~D---vvIDfT~p~a   57 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD---------------------GNTE---VVIDFTHPDV   57 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH---------------------TTCC---EEEECSCTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc---------------------cCCc---EEEEccChHH
Confidence            5899999999999999999876 8888765443333332211                     0112   5679999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +...+..+.+.  ++++|+-..|.
T Consensus        58 ~~~~~~~a~~~--g~~~VigTTG~   79 (245)
T 1p9l_A           58 VMGNLEFLIDN--GIHAVVGTTGF   79 (245)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHc--CCCEEEcCCCC
Confidence            98888877665  68999877763

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.37  E-value=0.054  Score=51.30  Aligned_cols=72  Identities=17%  Similarity=0.159  Sum_probs=51.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .+.+.+|+++|.|++ .+|+.+++.+.+.|++|++++.+.....                         ....-..+..|
T Consensus         9 ~~~~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~~-------------------------~~~ad~~~~~~   62 (389)
T 3q2o_A            9 RIILPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSPC-------------------------AQVADIEIVAS   62 (389)
T ss_dssp             CCCCTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCTT-------------------------TTTCSEEEECC
T ss_pred             ccCCCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCch-------------------------HHhCCceEecC
Confidence            455789999999966 5999999999999999999987653210                         00011234578


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWI  132 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li  132 (368)
                      ..|.+.+.++++       +.|++.
T Consensus        63 ~~d~~~l~~~~~-------~~dvI~   80 (389)
T 3q2o_A           63 YDDLKAIQHLAE-------ISDVVT   80 (389)
T ss_dssp             TTCHHHHHHHHH-------TCSEEE
T ss_pred             cCCHHHHHHHHH-------hCCEee
Confidence            888888777764       367764

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=95.34  E-value=0.13  Score=50.11  Aligned_cols=45  Identities=16%  Similarity=0.194  Sum_probs=37.2

Q ss_pred             CCeEEEEcCCC-hHHHHHHHHHHHC----CCeEEEEeCChHHHHHHHHHH
Q 017635           33 PRNVVITGSTR-GLGKALAREFLLS----GDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        33 ~k~vlITGas~-GIG~aia~~la~~----G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++|.|.||++ |.|.+++..|++.    |.+|++.++++++++...+..
T Consensus         3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~   52 (480)
T 1obb_A            3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIA   52 (480)
T ss_dssp             CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHH
Confidence            35788999999 9999999998864    789999999999887754443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.34  E-value=0.16  Score=46.92  Aligned_cols=45  Identities=16%  Similarity=0.158  Sum_probs=38.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      ++|.|+|| |.+|..++..|+..|. +|++.++++++++....++..
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~   50 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSH   50 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHT
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHh
Confidence            57899998 8999999999999997 899999999888766666544

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.33  E-value=0.067  Score=50.50  Aligned_cols=73  Identities=19%  Similarity=0.107  Sum_probs=53.3

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+.+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....                         ...-..+..
T Consensus         6 ~~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-------------------------~~ad~~~~~   59 (377)
T 3orq_A            6 FNKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-------------------------YVAHEFIQA   59 (377)
T ss_dssp             CCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-------------------------GGSSEEEEC
T ss_pred             cccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-------------------------hhCCEEEEC
Confidence            345567899999995 579999999999999999999886542100                         001134668


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWI  132 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li  132 (368)
                      |..|.+.+.+++++       +|+++
T Consensus        60 ~~~d~~~l~~~~~~-------~dvi~   78 (377)
T 3orq_A           60 KYDDEKALNQLGQK-------CDVIT   78 (377)
T ss_dssp             CTTCHHHHHHHHHH-------CSEEE
T ss_pred             CCCCHHHHHHHHHh-------CCcce
Confidence            99999888887653       68764

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.32  E-value=0.0018  Score=60.88  Aligned_cols=39  Identities=23%  Similarity=0.329  Sum_probs=35.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   69 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~   69 (368)
                      +++||+++|.| .|.+|+.+|+.+.+.|++|++.+++.++
T Consensus       172 ~L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          172 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            68999999997 5899999999999999999998888654

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.30  E-value=0.028  Score=54.79  Aligned_cols=73  Identities=11%  Similarity=0.281  Sum_probs=55.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++|.|+ |-+|+.+|+.|.++|++|+++++++++++.+.+++                      .+.++..|.++++-+
T Consensus         5 ~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----------------------~~~~i~Gd~~~~~~L   61 (461)
T 4g65_A            5 KIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----------------------DLRVVNGHASHPDVL   61 (461)
T ss_dssp             EEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----------------------SCEEEESCTTCHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----------------------CcEEEEEcCCCHHHH
Confidence            6889997 57999999999999999999999998876554332                      356678888888877


Q ss_pred             HHHHHHHHhHcCCCCEEEEccC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +++=      ..+-|.+|...+
T Consensus        62 ~~Ag------i~~ad~~ia~t~   77 (461)
T 4g65_A           62 HEAG------AQDADMLVAVTN   77 (461)
T ss_dssp             HHHT------TTTCSEEEECCS
T ss_pred             HhcC------CCcCCEEEEEcC
Confidence            6541      124677775443

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.29  E-value=0.16  Score=46.66  Aligned_cols=115  Identities=20%  Similarity=0.280  Sum_probs=69.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +|.|+|| |.+|..++..++..|. +|++.++++++++....++........           ...++... .|   .+.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~-----------~~~~i~~t-~d---~~a   64 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELG-----------VDIRISGS-NS---YED   64 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHT-----------CCCCEEEE-SC---GGG
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcC-----------CCeEEEEC-CC---HHH
Confidence            3788998 9999999999998887 699999999888766666654211000           11222211 23   211


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                                 +..-|++|..+|...  ++  ..+.+   ..+..|.-    +.+.+.+.+.+....+.++++|
T Consensus        65 -----------~~~aD~Vi~~ag~~~--k~--G~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           65 -----------MRGSDIVLVTAGIGR--KP--GMTRE---QLLEANAN----TMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             -----------GTTCSEEEECCSCCC--CS--SCCTH---HHHHHHHH----HHHHHHHHHHHHCTTCEEEECC
T ss_pred             -----------hCCCCEEEEeCCCCC--CC--CCcHH---HHHHHHHH----HHHHHHHHHHHHCCCeEEEEeC
Confidence                       236899999999854  22  12222   22344433    4444555554433567777764

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.28  E-value=0.061  Score=48.61  Aligned_cols=92  Identities=15%  Similarity=0.172  Sum_probs=56.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +++.|.|. |.+|..+++.|++.|++|++.+|++++.++..+.    ...    ...+  ....-.+..++..=+.+...
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~----~~~~--~~~~~~~aDvvi~~vp~~~~   70 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL----GAE----RAAT--PCEVVESCPVTFAMLADPAA   70 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----TCE----ECSS--HHHHHHHCSEEEECCSSHHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----CCe----ecCC--HHHHHhcCCEEEEEcCCHHH
Confidence            46788884 7999999999999999999999999887655431    000    0000  00000112334444556677


Q ss_pred             HHHHH---HHHHhHcCCCCEEEEccC
Q 017635          114 VQKLS---NFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       114 v~~~~---~~i~~~~g~iD~li~nAG  136 (368)
                      ++.++   +.+.....+=.++|+..+
T Consensus        71 ~~~v~~~~~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           71 AEEVCFGKHGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHcCcchHhhcCCCCCEEEeCCC
Confidence            77777   666555444456776644

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.26  E-value=0.047  Score=49.82  Aligned_cols=45  Identities=18%  Similarity=0.343  Sum_probs=38.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      -++|.|.|+ |.+|.++|..|++.|++|++.+|+++++++..+.+.
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~   59 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   59 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHH
Confidence            367999997 789999999999999999999999988877655443

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.25  E-value=0.069  Score=49.21  Aligned_cols=95  Identities=13%  Similarity=0.097  Sum_probs=57.8

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+.++|.|.|. |.+|..+|+.|++.|++|++.+|++++.+++.++    ...    ...+......  ...++..=+.+
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~----g~~----~~~~~~e~~~--~aDvVi~~vp~   97 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAAL----GAT----IHEQARAAAR--DADIVVSMLEN   97 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----TCE----EESSHHHHHT--TCSEEEECCSS
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHC----CCE----eeCCHHHHHh--cCCEEEEECCC
Confidence            34568888875 7899999999999999999999999887654332    000    0000000001  12233444556


Q ss_pred             HHHHHHHHH--HHHhHcCCCCEEEEccC
Q 017635          111 PADVQKLSN--FAVNEFGSIDIWINNAG  136 (368)
Q Consensus       111 ~~~v~~~~~--~i~~~~g~iD~li~nAG  136 (368)
                      ...++.++.  .+.+...+=.++|+...
T Consensus        98 ~~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           98 GAVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            667777765  55555444566666654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.24  E-value=0.039  Score=50.26  Aligned_cols=42  Identities=29%  Similarity=0.412  Sum_probs=37.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..+.+|+++|.|+ |+||+++++.+...|++|++.+|+.++.+
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            4688999999995 79999999999999999999999987644

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.23  E-value=0.024  Score=50.61  Aligned_cols=41  Identities=24%  Similarity=0.382  Sum_probs=36.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .+++ +++|.|+ ||.|++++..|++.|+ +|.+.+|+.++.++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            4578 8999996 8999999999999998 89999999887654

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.22  E-value=0.065  Score=48.79  Aligned_cols=91  Identities=13%  Similarity=0.042  Sum_probs=58.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +++.|.| .|-+|..+|+.|++.|++|++.+|++++.++..+.    ...    . ........ . ..++..=+.+...
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~----g~~----~-~~~~~~~~-~-aDvvi~~vp~~~~   83 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA----GAT----L-ADSVADVA-A-ADLIHITVLDDAQ   83 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT----TCE----E-CSSHHHHT-T-SSEEEECCSSHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC----CCE----E-cCCHHHHH-h-CCEEEEECCChHH
Confidence            4677777 57899999999999999999999999877654431    000    0 00000001 1 3344455667778


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ++.+++.+.....+=.++|++..
T Consensus        84 ~~~v~~~l~~~l~~g~ivv~~st  106 (296)
T 3qha_A           84 VREVVGELAGHAKPGTVIAIHST  106 (296)
T ss_dssp             HHHHHHHHHTTCCTTCEEEECSC
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCC
Confidence            88888777765544567777654

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.19  E-value=0.03  Score=50.30  Aligned_cols=42  Identities=17%  Similarity=0.196  Sum_probs=37.7

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++||+++|.|+++-+|+.+|+.|+++|++|.++.++...+++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~  189 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGS  189 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHH
Confidence            899999999999989999999999999999999887655543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.18  E-value=0.11  Score=47.03  Aligned_cols=93  Identities=14%  Similarity=0.213  Sum_probs=57.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC---eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD---RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~---~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++.|.|+ |-+|.++++.|++.|+   +|++.+|+++++++..++..-...       .+........++.++.+   .
T Consensus         4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~-------~~~~~~~~~aDvVilav---~   72 (280)
T 3tri_A            4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT-------QDNRQGALNADVVVLAV---K   72 (280)
T ss_dssp             SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE-------SCHHHHHSSCSEEEECS---C
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe-------CChHHHHhcCCeEEEEe---C
Confidence            56888887 7899999999999998   899999999887766543100000       00000012234544444   3


Q ss_pred             HHHHHHHHHHHHhH-cCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNE-FGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~-~g~iD~li~nAG~  137 (368)
                      ++.++.+++++... ..+=.++|++++.
T Consensus        73 p~~~~~vl~~l~~~~l~~~~iiiS~~ag  100 (280)
T 3tri_A           73 PHQIKMVCEELKDILSETKILVISLAVG  100 (280)
T ss_dssp             GGGHHHHHHHHHHHHHTTTCEEEECCTT
T ss_pred             HHHHHHHHHHHHhhccCCCeEEEEecCC
Confidence            45677777777654 4322377877653

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.11  E-value=0.043  Score=53.26  Aligned_cols=51  Identities=24%  Similarity=0.167  Sum_probs=39.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      .+++++|+++|.|. |+.|.++|+.|.++|++|.+.+++........++|++
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~   54 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLE   54 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHH
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHh
Confidence            45678999999998 7899999999999999999999875422223344543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=95.09  E-value=0.037  Score=49.93  Aligned_cols=45  Identities=20%  Similarity=0.330  Sum_probs=38.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      .+|+++|.| +||.|++++..|++.|+ +|.++.|+.++.+++.+++
T Consensus       118 ~~~~vlvlG-aGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            468899999 57999999999999997 7999999998887766554

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=95.05  E-value=0.39  Score=44.16  Aligned_cols=43  Identities=19%  Similarity=0.249  Sum_probs=37.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ++.|.|+ |.+|.+++..|++.|.  +|++.++++++++....++.
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~   46 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLI   46 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHH
Confidence            5889998 9999999999999998  99999999888776655554

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=95.01  E-value=0.21  Score=45.85  Aligned_cols=44  Identities=16%  Similarity=0.151  Sum_probs=36.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      .++|.|.|+ |.+|.++|..|++.|. +|++.++++++++....++
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l   48 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDI   48 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHH
Confidence            357899998 8999999999999998 9999999988777643333

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.00  E-value=0.032  Score=50.43  Aligned_cols=43  Identities=26%  Similarity=0.393  Sum_probs=38.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .+++||+++|.|.++-+|+.+|+.|+++|++|.++.++...++
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~  199 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA  199 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH
Confidence            5789999999999988999999999999999999987655544

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=94.95  E-value=0.14  Score=46.87  Aligned_cols=42  Identities=19%  Similarity=0.397  Sum_probs=35.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l   77 (368)
                      +|.|+|+ |.+|..++..|+..|.  +|++.++++++++....++
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l   45 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI   45 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh
Confidence            6889998 9999999999999998  9999999988776544443

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=94.90  E-value=0.11  Score=48.17  Aligned_cols=40  Identities=23%  Similarity=0.287  Sum_probs=33.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeE-EEEeCChHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRV-VVASRSSESVR   71 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~V-il~~R~~~~~~   71 (368)
                      ..|++|+|+|+ ||+|...++.+...|+++ +++++++++++
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~  199 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLA  199 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHH
Confidence            35889999987 899999999888999865 67788887764

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=94.90  E-value=0.04  Score=50.14  Aligned_cols=43  Identities=12%  Similarity=0.233  Sum_probs=37.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .+++||+++|.|+++-+|+.+|+.|+++|++|.++.|+...++
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~  203 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED  203 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence            5789999999999988999999999999999999988654443

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.85  E-value=0.08  Score=49.72  Aligned_cols=43  Identities=16%  Similarity=0.227  Sum_probs=36.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      +++++|.|.| .|-+|..+|+.|++.|++|++.+|++++.+++.
T Consensus        20 m~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~   62 (358)
T 4e21_A           20 FQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALE   62 (358)
T ss_dssp             --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             hcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence            4567888888 678999999999999999999999998876543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=94.81  E-value=0.032  Score=50.39  Aligned_cols=43  Identities=19%  Similarity=0.305  Sum_probs=37.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      .+++||+++|.|+++-+|+.+|+.|+++|++|.++.|+...++
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~  199 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK  199 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH
Confidence            4789999999999988999999999999999999987655444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	368
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-36
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-35
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-34
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	1e-33
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-32
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	6e-32
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-31
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-31
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-31
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-31
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-31
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	6e-31
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	6e-31
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-31
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	9e-31
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	1e-30
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-29
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-29
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	8e-29
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-28
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-28
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-28
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-28
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	4e-28
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	4e-28
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-28
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	6e-28
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-27
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-27
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-27
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-27
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-25
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-24
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-24
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-24
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	3e-24
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-24
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-24
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	1e-23
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	9e-23
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-22
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-22
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-22
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-22
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	1e-21
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-21
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-21
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-20
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-20
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	5e-20
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-20
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-17
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-15
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-15
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	7e-15
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	8e-15
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-10
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	3e-10
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	2e-09
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-09
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-08
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	7e-08
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-04
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	0.001
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.002
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	0.003

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (329), Expect = 2e-36
 Identities = 54/242 (22%), Positives = 103/242 (42%), Gaps = 24/242 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG++ G+G A+AR  +  G +VV  +R+  ++     E +     G         
Sbjct: 11  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPG--------- 61

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +    CD+    D+  + +   ++   +DI INNAG  +    LL  +    +
Sbjct: 62  ------TLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWK 114

Query: 154 QIVSTNLVGSILCTREAMRVMRDQ-PKGGHIFNM-DGAGSGGSSTPLTAVYGSTKCGLRQ 211
            + + N++   +CTREA + M+++    GHI N+   +G       +T  Y +TK  +  
Sbjct: 115 DMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTA 174

Query: 212 LQASLFKESKRSKVG--VHTASPGMVLTDLLLSGSTIQNKQMFNIICEL----PETVART 265
           L   L +E + ++        SPG+V T           ++      ++    PE VA  
Sbjct: 175 LTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEA 234

Query: 266 LV 267
           ++
Sbjct: 235 VI 236

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  127 bits (321), Expect = 3e-35
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 19/210 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITGS+ G+G+A A  F   G +V +  R +E +  T  ++         AAG S +
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL--------AAGVSEQ 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNE 150
                  V  +  DV   A   ++ +  + +FG +DI +NNAG        K     + E
Sbjct: 58  N------VNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIE 111

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
             +  ++ NL   I  T++A+  +      G I N+    SG  +TP    Y   K  + 
Sbjct: 112 SYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNISSIASGLHATPDFPYYSIAKAAID 169

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           Q   +   +  +  + V++ SPG+V T   
Sbjct: 170 QYTRNTAIDLIQHGIRVNSISPGLVATGFG 199

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  124 bits (314), Expect = 2e-34
 Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 22/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  VITG   G+G+A+A  F + G  + +A            E E  ++      G    
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP------EAEAAIRN----LGR--- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V  + CDV +P DV+      ++ FG  DI +NNAG      P  + T E+ +
Sbjct: 53  ------RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWK 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +    N+    L  +  +  M+    G  I                  Y STK       
Sbjct: 106 KTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI--EAYTHYISTKAANIGFT 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  +  +  + V+  +P +V T   
Sbjct: 164 RALASDLGKDGITVNAIAPSLVRTATT 190

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  123 bits (309), Expect = 1e-33
 Identities = 46/209 (22%), Positives = 80/209 (38%), Gaps = 26/209 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG  RG+G+A+A+ F   G  V +     E       E+ E +            
Sbjct: 6   KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-----EVAEAIG----------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A    D+ +  +  +    A    G +D+ +NNA         L     E  
Sbjct: 50  -------GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIA-APGSALTVRLPEWR 101

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL   +  +  A R MR    GG       +  G  +    A Y ++K GL  L 
Sbjct: 102 RVLEVNLTAPMHLSALAAREMRKV--GGGAIVNVASVQGLFAEQENAAYNASKGGLVNLT 159

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLS 242
            SL  +    ++ V+  +PG + T+ +L 
Sbjct: 160 RSLALDLAPLRIRVNAVAPGAIATEAVLE 188

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  119 bits (300), Expect = 3e-32
 Identities = 50/210 (23%), Positives = 81/210 (38%), Gaps = 19/210 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITGS+ G+G+  A  F   G  V +  RSSE +  T   +               K
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIIL--------------K 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
             +   +V  +  DV       ++ N  + +FG ID+ +NNAG           T++ I+
Sbjct: 52  SGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGID 111

Query: 154 ---QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
              + +  NL   I  T++    +          +   AG      P    Y   K  L 
Sbjct: 112 IYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQ--PDFLYYAIAKAALD 169

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           Q   S   +  +  + V++ SPGMV T   
Sbjct: 170 QYTRSTAIDLAKFGIRVNSVSPGMVETGFT 199

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  118 bits (298), Expect = 6e-32
 Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 21/220 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG T+G+G A+  EF   G  +   +R+   +   +++ ++              
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK------------- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                 +V G  CD     + +KL     + F G +DI INN G     KP L +T E+ 
Sbjct: 56  ----GFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAI-RSKPTLDYTAEDF 110

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
              +STNL  +   ++ A  +++    G  IF    AG   +S    ++Y +TK  L QL
Sbjct: 111 SFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASV--GSIYSATKGALNQL 168

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF 252
             +L  E     +  +  +P ++ T L  +    + K++ 
Sbjct: 169 ARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVV 208

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 1e-31
 Identities = 51/237 (21%), Positives = 83/237 (35%), Gaps = 29/237 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V+ITG+  G+G+  A EF     ++V+   +   +  T  + +               
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL------------- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                AKV     D     D+   +     E G + I +NNAG       L    + +IE
Sbjct: 55  ----GAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVV-YTSDLFATQDPQIE 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +    N++     T+  +  M      GHI  +  A +G  S P    Y S+K       
Sbjct: 110 KTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASA-AGHVSVPFLLAYCSSKFAAVGFH 167

Query: 214 ASLFKE---SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
            +L  E    + + V      P  V T  + + ST     +       PE V   L+
Sbjct: 168 KTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL------EPEEVVNRLM 218

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  117 bits (294), Expect = 1e-31
 Identities = 44/207 (21%), Positives = 85/207 (41%), Gaps = 27/207 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG+ +G+G+   +    SG +VV  +R++  +     E                 
Sbjct: 6   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--------------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  +  D+ +    +K    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 51  ------GIEPVCVDLGDWDATEK----ALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFD 99

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +  S NL      ++   R M ++   G I N+    +   + P    Y STK  +  L 
Sbjct: 100 RSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV-TFPNLITYSSTKGAMTMLT 158

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            ++  E    K+ V++ +P +VLTD+ 
Sbjct: 159 KAMAMELGPHKIRVNSVNPTVVLTDMG 185

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 2e-31
 Identities = 52/207 (25%), Positives = 87/207 (42%), Gaps = 24/207 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + VV+TG  RG+G  + R F+ SG RVV+  +     R    EL                
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--------------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     I CDV +  DV+ L +  +  FG +D  +NNAG +   +   + + +   
Sbjct: 52  ------GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFR 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           Q++  NL+G+   T+ A+  +R     G++ N+     G         Y +TK  +  + 
Sbjct: 106 QLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL-VGAIGQAQAVPYVATKGAVTAMT 162

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  +     V V+  SPG + T L 
Sbjct: 163 KALALDESPYGVRVNCISPGNIWTPLW 189

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  117 bits (293), Expect = 3e-31
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 21/208 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG +RG+G  +  E    G  V   SR+ + +   +T+                 
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK------------- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                 KV    CD+   ++ Q+L N   N F G ++I +NNAG    +K    +T E+ 
Sbjct: 56  ----GFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIV-IYKEAKDYTVEDY 110

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
             I+S N   +   +  A   ++   +G  +F    +G+     P  AVYG+TK  + QL
Sbjct: 111 SLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA--VPYEAVYGATKGAMDQL 168

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
              L  E  +  + V+   PG++ T L+
Sbjct: 169 TRCLAFEWAKDNIRVNGVGPGVIATSLV 196

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  116 bits (292), Expect = 3e-31
 Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 22/209 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG T G+G A+A +F+  G +V++  R S+        +                
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 ++     D  +     KL +     FG +   +NNAG     K + + T  E  
Sbjct: 53  ----PDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWR 107

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++++ NL G    TR  ++ M+++  G  I NM     G    P    Y ++K  +R + 
Sbjct: 108 KLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI-EGFVGDPSLGAYNASKGAVRIMS 166

Query: 214 ASLFKES--KRSKVGVHTASPGMVLTDLL 240
            S   +   K   V V+T  PG + T L+
Sbjct: 167 KSAALDCALKDYDVRVNTVHPGYIKTPLV 195

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  116 bits (291), Expect = 6e-31
 Identities = 66/239 (27%), Positives = 100/239 (41%), Gaps = 28/239 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG  RGLG   AR+ + +G RVV+A    E    T  EL +              
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD-------------- 51

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                        DV    D Q++  +A  EFGS+D  +NNAG + G   L   + E   
Sbjct: 52  ------AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG-MFLETESVERFR 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++V  NL G  +  +  +  M+D   GG I N+  A  G     LT+ YG++K G+R L 
Sbjct: 105 KVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAA-GLMGLALTSSYGASKWGVRGLS 162

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII-----CELPETVARTLV 267
                E    ++ V++  PGM  T +       Q +  +           P  +A  +V
Sbjct: 163 KLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVV 221

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  115 bits (289), Expect = 6e-31
 Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 32/239 (13%)

Query: 36  VVITGSTRGLGKALAREFLLSGDR-------VVVASRSSESVRMTVTELEENLKEGMMAA 88
           ++ITG+ +G+G+A+A EF  +          +V++SR++  +     E            
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-------- 55

Query: 89  GGSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 148
                     A    I  D+ + ADV++L+   V  +G ID  +NN      F  L   T
Sbjct: 56  ---------GALTDTITADISDMADVRRLTTHIVERYGHIDCLVNN-AGVGRFGALSDLT 105

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            E+ +  ++TNL G+   T+    +M  Q  G   F    A +       +++Y  +K G
Sbjct: 106 EEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF--RHSSIYCMSKFG 163

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
            R L  ++   +++  V +    PG V T +           M       PE +A  +V
Sbjct: 164 QRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMM-----PEDIAAPVV 217

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  116 bits (291), Expect = 8e-31
 Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 17/208 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           ++V+ITGS+ G+G++ A  F   G +V +  R+ + +  T  ++          AG  ++
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL--------KAGVPAE 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN-KGFKPLLQFTNEEI 152
                 K+  +  DV E +    + N  + +FG IDI +NNAG N            E  
Sbjct: 57  ------KINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELY 110

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++    N    I  T++           G I N+    +G  +      Y   K  L Q 
Sbjct: 111 QKTFKLNFQAVIEMTQKTK--EHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQY 168

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
                 +  +  V V++ SPG V T  +
Sbjct: 169 TRCTAIDLIQHGVRVNSVSPGAVATGFM 196

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (292), Expect = 9e-31
 Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 24/242 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG   G+GKA+ +E L  G  VV+ASR  E ++    EL+ NL            
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTK-------- 64

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+V  I C++    +V  L    ++ FG I+  +NN G      P    +++   
Sbjct: 65  ----QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWH 119

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++ TNL G+    +        +  G  +  +    +G    PL    G+ + G+  L 
Sbjct: 120 AVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---PLAVHSGAARAGVYNLT 176

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL--------PETVART 265
            SL  E   S + ++  +PG++ +   +       +  F    +         PE V+  
Sbjct: 177 KSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSV 236

Query: 266 LV 267
           + 
Sbjct: 237 VC 238

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  115 bits (289), Expect = 1e-30
 Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 20/236 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG   G+G+  A+ F+  G +VV+A  + +  +     +                
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP------------- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK-GFKPLLQFTNEEI 152
                  ++ + CDV +  DV+ L +  + + G +DI   N G        +L+  NE+ 
Sbjct: 54  -----DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF 108

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           ++++  N+ G+ L  + A RVM    K G I       S  +   ++ VY +TK  +  L
Sbjct: 109 KRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFTAGEGVSHVYTATKHAVLGL 167

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP 268
             SL  E     + V+  SP +V + LL     + + ++  +  +        L  
Sbjct: 168 TTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA 223

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (282), Expect = 1e-29
 Identities = 52/210 (24%), Positives = 83/210 (39%), Gaps = 27/210 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ +G+G+A A   LL G +V +   + E+       L E  +           
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQ--------- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K   I CDV +   ++      V+ FG +DI +NNAG             +  E
Sbjct: 55  ------KTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWE 99

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKG-GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + +  NLV  I  T   +  M  Q  G G I     + +G        VY ++K G+   
Sbjct: 100 KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGF 159

Query: 213 --QASLFKESKRSKVGVHTASPGMVLTDLL 240
              A+L      S V ++   PG V T +L
Sbjct: 160 TRSAALAANLMNSGVRLNAICPGFVNTAIL 189

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  111 bits (280), Expect = 5e-29
 Identities = 51/206 (24%), Positives = 82/206 (39%), Gaps = 14/206 (6%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++TG+  GLG+A A  F   G  VVV                +    G  ++     
Sbjct: 8   RVVLVTGAGGGLGRAYALAFAERGALVVVNDLG-----------GDFKGVGKGSSAADKV 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
              +  +      +       +KL   A++ FG ID+ +NNAG     +   + ++E+ +
Sbjct: 57  VEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL-RDRSFSRISDEDWD 115

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I   +L GS   TR A   M+ Q   G I     A SG       A Y + K GL  L 
Sbjct: 116 IIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLA 173

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
            +L  E +++ +  +T +P       
Sbjct: 174 NTLVIEGRKNNIHCNTIAPNAGSRMT 199

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  110 bits (276), Expect = 8e-29
 Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 22/237 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  + TG+ RG+G+ +A E    G  VVV   SS        +  E +   +   G    
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGA--- 56

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   I  D+ +P++V  L + AV+ FG +D  ++N+G    +   L+ T E  +
Sbjct: 57  ------QGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFD 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N  G     ++ ++  R   +GG I       +  +  P  A+Y  +K  +    
Sbjct: 110 KVFNLNTRGQFFVAQQGLKHCR---RGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFC 166

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI 270
            +   +     V V+  +PG V TD+    S   +           E +   L    
Sbjct: 167 RAFAVDCGAKGVTVNCIAPGGVKTDMFDENS--WHYAPGGYKGMPQEKIDEGLANMN 221

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  110 bits (275), Expect = 1e-28
 Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 18/207 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R  ++TG +RGLG  +A+    +G  VVVASR+ E       +L E              
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY------------ 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +     CDV    +V+KL      +FG +D  +N AG N+   P  +F  +E  
Sbjct: 54  ----GVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFR 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           Q++  NL G+    REA  ++R+      I           + P  + Y ++K G+  L 
Sbjct: 109 QVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-TMPNISAYAASKGGVASLT 167

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L KE  R  + V+  +PG   T + 
Sbjct: 168 KALAKEWGRYGIRVNVIAPGWYRTKMT 194

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  109 bits (274), Expect = 1e-28
 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 17/207 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V+ITG   GLG+A A      G ++ +   SSE +  +   + E   +          
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDA--------- 55

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +V     DV + A V+         FG ID + NNAG      P   FT  E +
Sbjct: 56  ------EVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFD 109

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++VS NL G  L   + +++MR+Q  G  +      G  G      + Y + K G+  L 
Sbjct: 110 KVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--GNQSGYAAAKHGVVGLT 167

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +   E  R  + ++  +PG + T ++
Sbjct: 168 RNSAVEYGRYGIRINAIAPGAIWTPMV 194

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  109 bits (273), Expect = 2e-28
 Identities = 46/243 (18%), Positives = 91/243 (37%), Gaps = 35/243 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +NV+   +  G+G   +RE +    +  V     E+           L E          
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN--------PTALAELKAINPK--- 54

Query: 94  KNLVHAKVAGIACDVCEP-ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  +     DV  P A+ +KL     ++  ++DI IN AG            + +I
Sbjct: 55  -----VNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAG---------ILDDHQI 100

Query: 153 EQIVSTNLVGSILCTREAMR--VMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLR 210
           E+ ++ N  G +  T   +     R    GG I N+    +G ++     VY ++K  + 
Sbjct: 101 ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV-TGFNAIHQVPVYSASKAAVV 159

Query: 211 QLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN------KQMFNIICELPETVAR 264
               SL K +  + V  ++ +PG+  T L+ + ++  +      + + +   +  E   +
Sbjct: 160 SFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQ 219

Query: 265 TLV 267
             V
Sbjct: 220 NFV 222

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  108 bits (272), Expect = 3e-28
 Identities = 54/241 (22%), Positives = 91/241 (37%), Gaps = 28/241 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             V+ITG   GLG+AL   F+  G +V V  +S+E +    T+  +N             
Sbjct: 6   EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  V GI  DV    D ++ ++  V  FG ID  I NAG       L+    E ++
Sbjct: 53  -------VLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLD 105

Query: 154 ----QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGL 209
               ++   N+ G I   +  +  +    +G  IF +  AG   +      +Y + K  +
Sbjct: 106 AAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPN--GGGPLYTAAKHAI 162

Query: 210 RQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR 269
             L   L  E     V V+    G + +DL    S     +  + +       +   + R
Sbjct: 163 VGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGR 221

Query: 270 I 270
           +
Sbjct: 222 M 222

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 4e-28
 Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 27/206 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++TG+ +G+G+   +    +G RVV  SR+   +   V E                 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  +  +  D+ +    ++    A+   G +D+ +NNA      +P L+ T E  +
Sbjct: 53  ------GIEPVCVDLGDWEATER----ALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFD 101

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +    NL   I  ++   R +  +   G I N+        +    +VY STK  L  L 
Sbjct: 102 RSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQC-SQRAVTNHSVYCSTKGALDMLT 160

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDL 239
             +  E    K+ V+  +P +V+T +
Sbjct: 161 KVMALELGPHKIRVNAVNPTVVMTSM 186

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  108 bits (271), Expect = 4e-28
 Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 18/205 (8%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+T G+G  +AR     G RV V +R  E +R T+ EL E                
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--------------- 49

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +  G  CDV    +++ L    V  +G +D+ +NNAG   G     +  +E    +
Sbjct: 50  --GVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG-GATAELADELWLDV 106

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           V TNL G    T++ ++      +G        +  G       A Y ++K G+     +
Sbjct: 107 VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKA 166

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L  E  R+ + V+   PG V T + 
Sbjct: 167 LGLELARTGITVNAVCPGFVETPMA 191

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  108 bits (269), Expect = 5e-28
 Identities = 40/256 (15%), Positives = 83/256 (32%), Gaps = 47/256 (18%)

Query: 33  PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSS 92
           P +VV+TG+ RG+G  L ++ +   +   + + + +          E   E         
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARD---------VEKATE--------- 44

Query: 93  KKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGS--IDIWINNAGTNKGFKPLLQFTNE 150
            K++  ++V  +   V     +    +      GS  + + INNAG    +    +    
Sbjct: 45  LKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRA 104

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI----------------FNMDGAGSGGS 194
            I + +  N    +L T++ + ++++                              + GS
Sbjct: 105 VIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGS 164

Query: 195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNI 254
           +      Y  +K  +     +L  + K   V V    PG V T+L    + +        
Sbjct: 165 AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT------- 217

Query: 255 ICELPETVARTLVPRI 270
                E     L+   
Sbjct: 218 ----VEQSTAELISSF 229

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  108 bits (270), Expect = 6e-28
 Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 26/209 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG   G+G  + +  L  G +V  +  +  + +    EL E              
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE-------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +  DV   AD   +        G++++ +NNAG       +     E+  
Sbjct: 53  ------RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFS 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  N     +  ++ +  M++   GG I NM    S        A Y ++K  +  L 
Sbjct: 106 RLLKINTESVFIGCQQGIAAMKET--GGSIINMASV-SSWLPIEQYAGYSASKAAVSALT 162

Query: 214 ASLFKE--SKRSKVGVHTASPGMVLTDLL 240
            +       +   + V++  P  + T ++
Sbjct: 163 RAAALSCRKQGYAIRVNSIHPDGIYTPMM 191

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  107 bits (267), Expect = 1e-27
 Identities = 49/238 (20%), Positives = 85/238 (35%), Gaps = 30/238 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V+ITG+  G+G+A    F   G R+V        +R     +                
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---------------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV +PA V++    A+   G +D  ++ AG         +   E+ E
Sbjct: 50  ------GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGIT-RDNFHWKMPLEDWE 102

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++  NL GS L  + A   MR++  G  +     A          A Y ++  G+  L 
Sbjct: 103 LVLRVNLTGSFLVAKAASEAMREKNPGSIVLT---ASRVYLGNLGQANYAASMAGVVGLT 159

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 267
            +L  E  R  + V+T +PG + T +         ++            P  VA   +
Sbjct: 160 RTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL 217

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 4e-27
 Identities = 54/279 (19%), Positives = 106/279 (37%), Gaps = 34/279 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++TG+++G+G+ +A      G  VVV +RS E+++  V+   E              
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE-------------- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
             L  A    IA  + +    ++    A    G +D+ I N  TN     L       + 
Sbjct: 61  --LGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITN-TSLNLFHDDIHHVR 117

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           + +  N +  ++ T  A+ +++     G I  +  + +G  + P+ A Y ++K  L    
Sbjct: 118 KSMEVNFLSYVVLTVAALPMLKQ--SNGSIVVV-SSLAGKVAYPMVAAYSASKFALDGFF 174

Query: 214 ASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIR 271
           +S+ KE    R  V +     G++ T+  +         + ++     E  A  ++    
Sbjct: 175 SSIRKEYSVSRVNVSITLCVLGLIDTETAMK----AVSGIVHMQAAPKEECALEIIKGGA 230

Query: 272 -----VVKGSGKAINYLT---PPRILLALVTAWLRRGRW 302
                V   S      L      +IL  L +      R+
Sbjct: 231 LRQEEVYYDSSLWTTLLIRNPSRKILEFLYSTSYNMDRF 269

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  106 bits (264), Expect = 4e-27
 Identities = 47/238 (19%), Positives = 89/238 (37%), Gaps = 20/238 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+   +G A A      G  + +   + E++      + E              
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +     CDV     V    +  V +FG ID   NNAG    F P+  + +++  
Sbjct: 53  ----GVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFA 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++++ N+ G+    +   R M  Q  G  +     AG  G   P  A YG++K  +  L 
Sbjct: 109 RVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP--PNMAAYGTSKGAIIALT 166

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGST-IQNKQMFNIICELPETVARTLVPRI 270
            +   +     + V+  SPG +    +      +Q K         P+ VA+ ++  +
Sbjct: 167 ETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV 224

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  105 bits (264), Expect = 4e-27
 Identities = 47/213 (22%), Positives = 74/213 (34%), Gaps = 23/213 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++TG  RG+G A  R    +G  V V  RS+        ++ +              
Sbjct: 10  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG----------- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K     CDV     V K       + G I   I NAG +   KP  + T+E+  
Sbjct: 59  -----VKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFA 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFN------MDGAGSGGSSTPLTAVYGSTKC 207
            +   N+ G     R   ++   + + G I             S  + +     Y S+K 
Sbjct: 113 FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKA 172

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
               L   L  E   + + V+  SPG V TD  
Sbjct: 173 ACSNLVKGLAAEWASAGIRVNALSPGYVNTDQT 205

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  101 bits (253), Expect = 1e-25
 Identities = 29/205 (14%), Positives = 58/205 (28%), Gaps = 25/205 (12%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++T      G   A     +G  V     S +       + +E                
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFK-------QKDE---------------- 39

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
           L                +  +L     + +G +D+ ++N      F+P+ ++  E+    
Sbjct: 40  LEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGA 99

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           V    +            M+ +  G  IF               + Y S + G   L  +
Sbjct: 100 VEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF--GPWKELSTYTSARAGACTLANA 157

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
           L KE     + V    P  + ++  
Sbjct: 158 LSKELGEYNIPVFAIGPNYLHSEDS 182

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 99.0 bits (246), Expect = 1e-24
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITG+  G+GK +A  F  +G  VVV+  ++++    V E++          GG   
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ--------QLGG--- 60

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +     CD+    ++  L++FA+++ G +DI +NNAG              +  
Sbjct: 61  ------QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPFDMPMADFR 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +    N+      ++  +     +  GG +     + +  +       Y S+K     L 
Sbjct: 113 RAYELNVFSFFHLSQ--LVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLV 170

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            ++  +     + V+  +PG +LTD L
Sbjct: 171 RNMAFDLGEKNIRVNGIAPGAILTDAL 197

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.2 bits (246), Expect = 1e-24
 Identities = 45/251 (17%), Positives = 88/251 (35%), Gaps = 60/251 (23%)

Query: 31  AGPRNVVITGSTRGLGKALAREFL-LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAG 89
           +G    ++TG  +G+G A+ R+   L    VV+ +R     +  V +L+           
Sbjct: 1   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--------- 51

Query: 90  GSSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTN 149
                            D+ +   ++ L +F   E+G +D+ +NNAG            +
Sbjct: 52  --------GLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFH 102

Query: 150 EEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTA--------- 200
            + E  + TN  G+     E + +++ Q +  ++ ++    +  S +P            
Sbjct: 103 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162

Query: 201 ----------------------------VYGSTKCGL----RQLQASLFKESKRSKVGVH 228
                                        YG TK G+    R     L ++ K  K+ ++
Sbjct: 163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLN 222

Query: 229 TASPGMVLTDL 239
              PG V TD+
Sbjct: 223 ACCPGWVRTDM 233

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 98.7 bits (245), Expect = 2e-24
 Identities = 52/241 (21%), Positives = 91/241 (37%), Gaps = 18/241 (7%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+TGST G+G  +A      G  +V+                E ++ G+ A  G   
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHG--- 54

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV     D+ +   V+ L + AV + G IDI +NN    +    +  F  E+ +
Sbjct: 55  -----VKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNN-AGIQHTALIEDFPTEKWD 108

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I++ NL      T  A+  M+ Q   G I N+  A  G  ++   + Y + K G+    
Sbjct: 109 AILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA-HGLVASANKSAYVAAKHGVVGFT 166

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVV 273
                E+    +  +   PG V T L+    +   ++           +     P ++ V
Sbjct: 167 KVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226

Query: 274 K 274
            
Sbjct: 227 T 227

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 97.5 bits (242), Expect = 3e-24
 Identities = 49/207 (23%), Positives = 82/207 (39%), Gaps = 26/207 (12%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++TG+  G+G+A    F   G  +V   R    +   V  LE               
Sbjct: 6   KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--------------- 50

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A+   +  DV +P  V+ +   A+ EFG +    + AG             E  E
Sbjct: 51  -----AEAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWE 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++  NL GS L  R+A  V+ +        ++ G G+ G      A Y + K G+  L 
Sbjct: 105 KVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG-----LAHYAAGKLGVVGLA 159

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  E  R  V V+   PG++ T + 
Sbjct: 160 RTLALELARKGVRVNVLLPGLIQTPMT 186

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 97.9 bits (243), Expect = 4e-24
 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 20/207 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ RG+G+ +A E    G +V+V   +S        E  E +   +   G    
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANST-------ESAEEVVAAIKKNGS--- 68

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A +  +V    D+ ++   AV  FG +DI  +N+G    F  +   T EE +
Sbjct: 69  ------DAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFD 121

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N  G     REA + +      G +  M        + P  AVY  +K  +    
Sbjct: 122 RVFTINTRGQFFVAREAYKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFA 178

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
             +  +    K+ V+  +PG + TD+ 
Sbjct: 179 RCMAIDMADKKITVNVVAPGGIKTDMY 205

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 97.1 bits (241), Expect = 7e-24
 Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 18/207 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + VVITGS+ GLGK++A  F     +VVV  RS E       +   ++ E +   GG   
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGG--- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 +   +  DV   +DV  L   A+ EFG +D+ INNAG         + +  +  
Sbjct: 58  ------EAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLE-NPVSSHEMSLSDWN 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +++ TNL G+ L +REA++   +    G + NM          PL   Y ++K G++ + 
Sbjct: 111 KVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS-VHEKIPWPLFVHYAASKGGMKLMT 169

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  E     + V+   PG + T + 
Sbjct: 170 ETLALEYAPKGIRVNNIGPGAINTPIN 196

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 95.9 bits (238), Expect = 1e-23
 Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 24/234 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +++G  RG+G +  R  +  G +VV      E  +    EL +              
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD-------------- 52

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     +  DV +PA  +   + AV  FG + + +NNAG       +  +   E +
Sbjct: 53  ------AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGIL-NIGTIEDYALTEWQ 105

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           +I+  NL G  L  R  ++ M++  +G  I        G + T     Y +TK  +R L 
Sbjct: 106 RILDVNLTGVFLGIRAVVKPMKEAGRGSIINISS--IEGLAGTVACHGYTATKFAVRGLT 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
            S   E   S + V++  PG+V T +         +       E P  V+  +V
Sbjct: 164 KSTALELGPSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAE-PVEVSNLVV 216

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 94.4 bits (234), Expect = 5e-23
 Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 21/208 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              ++TG ++G+G A+  E    G RV   SR+ + +   +    E              
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK------------- 53

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                  V G  CD+    +  KL     + F G ++I +NNA      K    FT ++ 
Sbjct: 54  ----GLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNA-GVVIHKEAKDFTEKDY 108

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
             I+ TN   +   ++ A  +++    G  IF    AG     +   ++Y ++K  + Q+
Sbjct: 109 NIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV--SLYSASKGAINQM 166

Query: 213 QASLFKESKRSKVGVHTASPGMVLTDLL 240
             SL  E  +  + V++ +PG++LT L+
Sbjct: 167 TKSLACEWAKDNIRVNSVAPGVILTPLV 194

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.7 bits (232), Expect = 9e-23
 Identities = 49/252 (19%), Positives = 83/252 (32%), Gaps = 35/252 (13%)

Query: 34  RNVVITGSTRGLGKALAREF---LLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
              V+TG++RG G+ALA +    L  G  ++V++RS   +R    EL     +       
Sbjct: 7   AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL------ 60

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQK----LSNFAVNEFGSIDIWINNA--GTNKGFKPL 144
                    KV   A D+   A VQ+    +      E     + INNA    +     L
Sbjct: 61  ---------KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFL 111

Query: 145 LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGS 204
                 E+    + NL   +  T   +   +D P          +           +Y +
Sbjct: 112 NVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCA 171

Query: 205 TKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLL----LSGSTIQNKQMFNIICEL-- 258
            K     L   L  E     V V + +PG +  D+      +    + +     +     
Sbjct: 172 GKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGA 229

Query: 259 ---PETVARTLV 267
                T A+ L+
Sbjct: 230 LVDCGTSAQKLL 241

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 93.3 bits (231), Expect = 1e-22
 Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 27/238 (11%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG++RG+G+A+A      G +V+  + S    +     L                
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                A   G+  +V +PA ++ +      EFG +DI +NNAG  +     ++  +EE  
Sbjct: 50  -----ANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLL-MRMKDEEWN 103

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I+ TNL      ++  MR M  + + G I  + G+  G       A Y + K GL    
Sbjct: 104 DIIETNLSSVFRLSKAVMRAMMKK-RHGRIITI-GSVVGTMGNGGQANYAAAKAGLIGFS 161

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 267
            SL +E     + V+  +PG + TD+  + S  Q   +   +        + +A  + 
Sbjct: 162 KSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA 219

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 92.6 bits (229), Expect = 3e-22
 Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 22/207 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  +ITGS RG+G+A A  ++  G RV +A  + E+ R T  E+                
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---------------- 49

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                     IA DV + A + +     ++ +GSIDI +NN        P+++ T E  +
Sbjct: 50  ----GPAACAIALDVTDQASIDRCVAELLDRWGSIDILVNN-AALFDLAPIVEITRESYD 104

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++ + N+ G++   +   R M    +GG I NM     G     L  VY +TK  +  L 
Sbjct: 105 RLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQA-GRRGEALVGVYCATKAAVISLT 163

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            S      R  + V+  +PG+V  +  
Sbjct: 164 QSAGLNLIRHGINVNAIAPGVVDGEHW 190

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 92.4 bits (229), Expect = 3e-22
 Identities = 58/238 (24%), Positives = 104/238 (43%), Gaps = 24/238 (10%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  ++TG+ RG+G+ +A+    S   V+  SR+ +S    V E++               
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF------------- 57

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 + +G A DV +  ++ ++ N  + E  ++DI +NNAG  +     L+  N+E E
Sbjct: 58  ----GYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF-LRMKNDEWE 112

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            ++ TNL      T+   + M +  + G I N+  +  G +     A Y S+K G+    
Sbjct: 113 DVLRTNLNSLFYITQPISKRMINN-RYGRIINI-SSIVGLTGNVGQANYSSSKAGVIGFT 170

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 267
            SL KE     + V+  +PG + +D+    S    K + + I       PE VA    
Sbjct: 171 KSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 228

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 90.9 bits (225), Expect = 9e-22
 Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 23/236 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           VV+TG++RG+GKA+A     +G +V+V    S        +  E + + + A GG     
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGG----- 51

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
               +      DV + ADV+ +   A++ +G+ID+ +NNAG  +     ++    + +++
Sbjct: 52  ----QAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL-IRMKKSQWDEV 106

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  NL G  LCT+ A ++M  + + G I N+  +  G       A Y + K G+     +
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKK-RKGRIINI-ASVVGLIGNIGQANYAAAKAGVIGFSKT 164

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 267
             +E     + V+   PG + +D+         K++   I       PE VA  + 
Sbjct: 165 AAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVE 220

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 90.6 bits (224), Expect = 1e-21
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 19/205 (9%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            ++TG+ +G+GKA+A   +  G  V +A  +  + +   +E+ +                
Sbjct: 4   ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--------------- 48

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   +  DV +   V      A    G  D+ +NNAG      P+   T E ++++
Sbjct: 49  --GGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKV 105

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
            + N+ G I   + A+   + +  GG I N     +G    P  AVY S+K  +R L  +
Sbjct: 106 YNINVKGVIWGIQAAVEAFKKEGHGGKIINACS-QAGHVGNPELAVYSSSKFAVRGLTQT 164

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL 240
             ++     + V+   PG+V T + 
Sbjct: 165 AARDLAPLGITVNGYCPGIVKTPMW 189

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 2e-21
 Identities = 47/205 (22%), Positives = 76/205 (37%), Gaps = 18/205 (8%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +   ITG   GLGK +       G + V+ASR  + ++ T  ++                
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGN---------- 75

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV  I CDV +P  VQ   +  +   G  +I INNA  N    P  + +    +
Sbjct: 76  ------KVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWK 128

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            I    L G+   T E  + +    KG    ++    +   S  +     S K G+  + 
Sbjct: 129 TITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVP-SASAKAGVEAMS 187

Query: 214 ASLFKESKRSKVGVHTASPGMVLTD 238
            SL  E  +  +  +   PG + T 
Sbjct: 188 KSLAAEWGKYGMRFNVIQPGPIKTK 212

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.2 bits (220), Expect = 7e-21
 Identities = 53/299 (17%), Positives = 88/299 (29%), Gaps = 46/299 (15%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V+ITG + G+G  LA        +      +   ++ T   L E  +      G      
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLK-TQGRLWEAARALACPPG------ 57

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                +  +  DV +   V                 +          PL     + +  +
Sbjct: 58  ----SLETLQLDVRDSKSVAAARERVTEGR---VDVLVCNAGLGLLGPLEALGEDAVASV 110

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
           +  N+VG++   +  +  M+ +  G  +      G  G   P   VY ++K  L  L  S
Sbjct: 111 LDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL--PFNDVYCASKFALEGLCES 168

Query: 216 LFKESKRSKVGVHTASPGMVLTDLL---------------------LSGSTIQNKQMFNI 254
           L        V +     G V T  +                            +KQ+F  
Sbjct: 169 LAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE 228

Query: 255 ICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALYAA 313
             + PE VA   +     ++     + Y T  R L       LR  R  D  G     A
Sbjct: 229 AAQNPEEVAEVFL---TALRAPKPTLRYFTTERFL-----PLLRM-RLDDPSGSNYVTA 278

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 87.4 bits (216), Expect = 1e-20
 Identities = 39/207 (18%), Positives = 77/207 (37%), Gaps = 35/207 (16%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + V++  ++RG+G+A+A      G  V + +R+           EE LK           
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARN-----------EELLKR---------- 43

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   +G    VC   D++K  +    +   +DI + NAG  K      + TNE+ +
Sbjct: 44  --------SGHRYVVC---DLRKDLDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFK 91

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           + + +  +  I   R  +  M+++  G  +     +              S +  L    
Sbjct: 92  EAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP--IENLYTSNSARMALTGFL 149

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            +L  E     + V+  +PG   T+ +
Sbjct: 150 KTLSFEVAPYGITVNCVAPGWTETERV 176

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 88.0 bits (217), Expect = 1e-20
 Identities = 44/226 (19%), Positives = 67/226 (29%), Gaps = 26/226 (11%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
            VITG  R +G ++A      G RVVV  R SE          + L   + AA   S   
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE-------GAAQRLVAELNAARAGS--- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                   ++         + + + +   FG  D+ +NNA       PLL   +      
Sbjct: 54  -AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAAD 111

Query: 156 VST-----------NLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS---STPLTAV 201
                         N V  +   R   R   +                       P   V
Sbjct: 112 AKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCV 171

Query: 202 YGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ 247
           Y   K  L  L  +   E     + V+  +PG+ L    +   T +
Sbjct: 172 YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQE 217

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.9 bits (212), Expect = 5e-20
 Identities = 43/207 (20%), Positives = 78/207 (37%), Gaps = 28/207 (13%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           + +++T + +G+G+A A  F   G +V+    +           E  L+E          
Sbjct: 7   KVIILTAAAQGIGQAAALAFAREGAKVIATDIN-----------ESKLQE---------- 45

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 K  GI   V +    +++  F  NE   +D+  N AG       +L    ++ +
Sbjct: 46  ----LEKYPGIQTRVLDVTKKKQIDQF-ANEVERLDVLFNVAGFV-HHGTVLDCEEKDWD 99

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
             ++ N+    L  +  +  M  Q   G+I NM    S         VY +TK  +  L 
Sbjct: 100 FSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLT 158

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLL 240
            S+  +  +  +  +   PG V T  L
Sbjct: 159 KSVAADFIQQGIRCNCVCPGTVDTPSL 185

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 85.2 bits (210), Expect = 8e-20
 Identities = 51/238 (21%), Positives = 94/238 (39%), Gaps = 35/238 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+V++TG  RG+G A+A+     G +V V  R S +                        
Sbjct: 8   RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------- 44

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                  + G+  DV +   V +         G +++ ++NA        L++ T E+ E
Sbjct: 45  -----KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNA-GLSADAFLMRMTEEKFE 98

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
           ++++ NL G+    + A R M+    G  IF    +G  G      A Y ++K G+  + 
Sbjct: 99  KVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQ--ANYAASKAGVIGMA 156

Query: 214 ASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE----LPETVARTLV 267
            S+ +E  ++ V  +  +PG + TD+  +      +     I       P  VA  + 
Sbjct: 157 RSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVS 214

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 79.0 bits (193), Expect = 2e-17
 Identities = 39/223 (17%), Positives = 75/223 (33%), Gaps = 35/223 (15%)

Query: 34  RNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGG 90
            +++ITG  RGLG  L +  L        +    R+ E  +    ELE+  K        
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK----ELEDLAKNHSN---- 54

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQK--LSNFAVNEFGSIDIWINNAGTNKGFKPLLQFT 148
                     +  +  D+       K       V +   +++  NNAG       +    
Sbjct: 55  ----------IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVR 104

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGG------------HIFNMDGAGSGGSST 196
           ++E+   + TN V  I+  +  + +++   K                 +       G++ 
Sbjct: 105 SQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTD 164

Query: 197 PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL 239
                Y ++K  L     SL  +    ++   +  PG V TD+
Sbjct: 165 GGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM 207

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 72.5 bits (177), Expect = 3e-15
 Identities = 30/207 (14%), Positives = 56/207 (27%), Gaps = 31/207 (14%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R V++ G    LG    + F      V                                 
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN------------------------- 37

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
           +    + +  +     E AD        +     +D  +  AG   G     +   +  +
Sbjct: 38  EEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCD 97

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
            +   ++  S + +  A + +++           GA +    TP    YG  K  + QL 
Sbjct: 98  LMWKQSIWTSTISSHLATKHLKEGGLLTLA----GAKAALDGTPGMIGYGMAKGAVHQLC 153

Query: 214 ASLFKE--SKRSKVGVHTASPGMVLTD 238
            SL  +     S        P  + T 
Sbjct: 154 QSLAGKNSGMPSGAAAIAVLPVTLDTP 180

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 71.4 bits (174), Expect = 5e-15
 Identities = 30/208 (14%), Positives = 60/208 (28%), Gaps = 35/208 (16%)

Query: 35  NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKK 94
            V++ G    LG A+   F  +G  V+    S+                           
Sbjct: 4   KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------------------- 40

Query: 95  NLVHAKVAGIACDVCEPADVQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEI 152
                    +  +       Q +     +  +   +D     AG   G     +   +  
Sbjct: 41  ----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNA 96

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQL 212
           + ++  ++  S +  + A   ++       +  + GA +    TP    YG  K  +  L
Sbjct: 97  DLMIKQSVWSSAIAAKLATTHLKPG----GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHL 152

Query: 213 QASLFKE--SKRSKVGVHTASPGMVLTD 238
            +SL  +         V T  P  + T 
Sbjct: 153 TSSLAAKDSGLPDNSAVLTIMPVTLDTP 180

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 7e-15
 Identities = 39/212 (18%), Positives = 66/212 (31%), Gaps = 21/212 (9%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
              VITG   GLG A A   +  G   V+    +        +L  N             
Sbjct: 6   LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPA------- 58

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                      +    + A       F   +       I  A      K     T E+ +
Sbjct: 59  --------DVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ 110

Query: 154 QIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
           +++  NL+G+    R     M         + G I N   + +        A Y ++K G
Sbjct: 111 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINT-ASVAAFEGQVGQAAYSASKGG 169

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMVLTDLL 240
           +  +   + ++     + V T +PG+  T LL
Sbjct: 170 IVGMTLPIARDLAPIGIRVMTIAPGLFGTPLL 201

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 71.0 bits (173), Expect = 8e-15
 Identities = 51/247 (20%), Positives = 83/247 (33%), Gaps = 44/247 (17%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           R+ ++TG   GLG+A A      G RVVV     E                         
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------------------ 37

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL---LQFTNE 150
                  +  +  DV    DV++ +     E   +   ++ AG     K L        E
Sbjct: 38  -----EDLIYVEGDVTREEDVRR-AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLE 91

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQP-----KGGHIFNMDGAGSGGSSTPLTAVYGST 205
              +++  NL+G+    R A   MR+ P     + G I N   + +        A Y ++
Sbjct: 92  SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNT-ASVAAFEGQIGQAAYAAS 150

Query: 206 KCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL-----PE 260
           K G+  L     +E     + V T +PG+  T LL          +   +        PE
Sbjct: 151 KGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPE 210

Query: 261 TVARTLV 267
             A  ++
Sbjct: 211 EYAALVL 217

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 68.5 bits (166), Expect = 1e-13
 Identities = 25/186 (13%), Positives = 52/186 (27%), Gaps = 8/186 (4%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL--EENLKEGMMAAGGSSK 93
            ++TG+ + LG+++A      G  V +    S +    ++           +      S 
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                   A  +  V       +L       +G  D+ +NNA +     PLL+   +  E
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHE 123

Query: 154 QI-----VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
                          +  +         +     +        G + + +  V   T   
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 209 LRQLQA 214
           L     
Sbjct: 184 LLGYTI 189

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 66.8 bits (162), Expect = 3e-13
 Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 27/207 (13%)

Query: 34  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
           +  ++ G  + R LG A+A +   +G  V ++ ++          L    ++   A GG+
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER--------LRPEAEKLAEALGGA 60

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFT 148
                          DV +  ++  L       FG +D  ++              +   
Sbjct: 61  LLFR----------ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTR 110

Query: 149 NEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCG 208
            ++    +  +    +   R A  ++    +GG I  +    +     P   V    K  
Sbjct: 111 RQDWLLALEVSAYSLVAVARRAEPLL---REGGGIVTL-TYYASEKVVPKYNVMAIAKAA 166

Query: 209 LRQLQASLFKESKRSKVGVHTASPGMV 235
           L      L  E     V V+  S G V
Sbjct: 167 LEASVRYLAYELGPKGVRVNAISAGPV 193

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 58.0 bits (139), Expect = 3e-10
 Identities = 18/154 (11%), Positives = 41/154 (26%), Gaps = 43/154 (27%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             +VI+G   G+G A  +    +G ++V        V                       
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------------- 38

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEI 152
                        D+      ++     + +    +D  +  AG        L    + +
Sbjct: 39  -----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLCAG--------LGPQTKVL 79

Query: 153 EQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM 186
             +VS N  G+       +  ++   +   +   
Sbjct: 80  GNVVSVNYFGATELMDAFLPALKKGHQPAAVVIS 113

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 58.4 bits (139), Expect = 3e-10
 Identities = 29/222 (13%), Positives = 65/222 (29%), Gaps = 22/222 (9%)

Query: 36  VVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
             I G   T G G  +A+E      +++                       M+       
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 94  KNLVHAKVA---------------GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTN 138
             L                         ++ +   ++ ++N    ++G I++ +++    
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA 124

Query: 139 KGF-KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTP 197
           K   K LL  + +     +S +    I   +  + +M+ Q     I ++    S      
Sbjct: 125 KEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQS---SIISLTYHASQKVVPG 181

Query: 198 LTAVYGSTKCGLRQLQASLFKE-SKRSKVGVHTASPGMVLTD 238
                 S K  L      L     +   + ++T S G + + 
Sbjct: 182 YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 55.3 bits (132), Expect = 2e-09
 Identities = 30/211 (14%), Positives = 66/211 (31%), Gaps = 28/211 (13%)

Query: 34  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
           + +++TG  S   +   +A+     G  +    ++         +L+  ++E     G  
Sbjct: 6   KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND--------KLKGRVEEFAAQLG-- 55

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP----LLQF 147
                       + CDV E A +  +       +   D ++++ G   G +     +   
Sbjct: 56  --------SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAV 107

Query: 148 TNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
           T E  +     +    +   +    ++     G  +  +   G    + P   V G  K 
Sbjct: 108 TREGFKIAHDISSYSFVAMAKACRSML---NPGSALLTLSYLG-AERAIPNYNVMGLAKA 163

Query: 208 GLRQLQASLFKESKRSKVGVHTASPGMVLTD 238
            L      +        V V+  S G + T 
Sbjct: 164 SLEANVRYMANAMGPEGVRVNAISAGPIRTL 194

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 52.6 bits (125), Expect = 8e-09
 Identities = 21/183 (11%), Positives = 40/183 (21%), Gaps = 32/183 (17%)

Query: 34  RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK 93
           +  V+   T  +G   A      G  VV+  R  +  +     + +              
Sbjct: 24  KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK-------------- 69

Query: 94  KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE 153
                 KV   A +  + A   +                           L        +
Sbjct: 70  ----RFKVNVTAAETADDASRAEA-------VKGAHFVFTAGAI-----GLELLPQAAWQ 113

Query: 154 QIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQ 213
              S  +V              D    G  +   G  + G+           +  + +L 
Sbjct: 114 NESSIEIVADYNAQPPLGIGGIDATDKGKEYG--GKRAFGALGIGGLKLKLHRACIAKLF 171

Query: 214 ASL 216
            S 
Sbjct: 172 ESS 174

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 50.4 bits (119), Expect = 7e-08
 Identities = 25/200 (12%), Positives = 47/200 (23%), Gaps = 20/200 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V + G T  LGK LA      G  +VV SR  E       E      +  +         
Sbjct: 3   VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI--------- 53

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                         + A+   ++   +    +ID   +     +  K ++          
Sbjct: 54  --------TGMKNEDAAEACDIAVLTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGA 104

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
                            V+  +     +  +  A            +    CG       
Sbjct: 105 KGFTYSSERSAAEIVAEVLESEKVVSALHTIPAARFAN--LDEKFDWDVPVCGDDDESKK 162

Query: 216 LFKESKRSKVGVHTASPGMV 235
           +         G+     G +
Sbjct: 163 VVMSLISEIDGLRPLDAGPL 182

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 50.8 bits (120), Expect = 7e-08
 Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 27/242 (11%)

Query: 34  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGS 91
           +  +I G  + + +   +A+     G  +      +ES+   V  + +            
Sbjct: 6   KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYL-NESLEKRVRPIAQE----------- 53

Query: 92  SKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEE 151
                          DV +    + L N    + GS+D  +++                 
Sbjct: 54  ------LNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETS 107

Query: 152 IEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQ 211
                +   +           +      G  +  +   GS         V G  K  L  
Sbjct: 108 KSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAH-YNVMGLAKAALES 166

Query: 212 LQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICE------LPETVART 265
               L  +  +  + V+  S G + T      +  +    +N I          E V   
Sbjct: 167 AVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNA 226

Query: 266 LV 267
            +
Sbjct: 227 GM 228

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 32/232 (13%), Positives = 55/232 (23%), Gaps = 25/232 (10%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++TG T G+G  +AR     G   ++    S        EL   L+             
Sbjct: 12  VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA--------- 62

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI 155
                                               + +A        +   T E IE+ 
Sbjct: 63  ------RTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERA 116

Query: 156 VSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQAS 215
               ++G+             +      F +  + +     P    Y      L  L   
Sbjct: 117 SRAKVLGARNLHE------LTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQ 170

Query: 216 LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV 267
              +           + G      +  G      +   +I   PET  R L 
Sbjct: 171 RRSDGLP----ATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQ 218

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 47.1 bits (110), Expect = 1e-06
 Identities = 25/177 (14%), Positives = 52/177 (29%), Gaps = 3/177 (1%)

Query: 34  RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL-KEGMMAAGG 90
           +   I G     G G A+A+    +G  ++V +          +       +  ++  G 
Sbjct: 9   KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGS 68

Query: 91  SSKKNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNE 150
             +   V+   A        P DV+    +A +   ++         + G   +L  +  
Sbjct: 69  LMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLA 128

Query: 151 EIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKC 207
              ++    L  S      A+              +     GG+S  LT +      
Sbjct: 129 NGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 40.5 bits (93), Expect = 2e-04
 Identities = 6/46 (13%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 34 RNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL 77
          + ++++G  +   +   +AR     G ++V+       +   +T+ 
Sbjct: 7  KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR 52

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 39.6 bits (91), Expect = 4e-04
 Identities = 8/38 (21%), Positives = 15/38 (39%)

Query: 34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR 71
          + + + G+T   G +L R     G  V     S + + 
Sbjct: 4  KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI 41

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM 72
          + + I G+T   G     + + +G  V V  R S  +  
Sbjct: 4  KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS 42

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 37.4 bits (85), Expect = 0.002
 Identities = 10/48 (20%), Positives = 18/48 (37%)

Query: 36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKE 83
          V+I G T  +GK +    +  G    V  R      +   ++    K+
Sbjct: 6  VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQ 53

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.9 bits (83), Expect = 0.003
 Identities = 13/96 (13%), Positives = 24/96 (25%)

Query: 36  VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKN 95
           V++ G     G A A         V +       +      LE       +    S  K 
Sbjct: 4   VMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKA 63

Query: 96  LVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIW 131
           L    +     D+C+   + +       +       
Sbjct: 64  LTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGE 99

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	368
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.74
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.67
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.67
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.65
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.65
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.64
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.61
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.6
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.59
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.55
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.54
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.54
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.53
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.52
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.51
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.49
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.48
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.46
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.46
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.45
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.44
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.44
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.35
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.17
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.1
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.1
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.05
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.96
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.96
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.8
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.76
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.96
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.96
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.91
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.86
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.85
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.8
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.7
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.66
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.65
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.61
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.57
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.56
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.55
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.55
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.53
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.48
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.46
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.4
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.34
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.18
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.11
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.09
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.09
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.07
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.01
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.0
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.99
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.98
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.98
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.96
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.9
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.9
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.88
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.87
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.86
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.85
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.81
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.75
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.72
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.71
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.68
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.68
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.67
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.62
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.59
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.55
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.51
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.5
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.45
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.44
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.4
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.4
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.39
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.38
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.36
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.34
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.32
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.26
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.22
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.2
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.17
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.17
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.08
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.07
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.95
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.89
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.86
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.46
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.4
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.26
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.14
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.13
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	94.98
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.78
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.22
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	94.17
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	93.97
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	93.95
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	93.92
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.75
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.74
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.36
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	93.31
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.25
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.05
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.0
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	92.91
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	92.7
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	92.7
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.65
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	92.65
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	92.59
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.57
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	92.56
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	92.47
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.29
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.19
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.1
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.98
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.97
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	91.94
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	91.92
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.76
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.63
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	91.6
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.59
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	91.53
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	91.32
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	91.32
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	91.24
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.23
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.22
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.19
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	91.17
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.14
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	91.11
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	90.76
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	90.64
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	90.52
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.36
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.04
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.93
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.9
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	89.68
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	89.53
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	89.5
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	89.49
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	89.42
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	89.41
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.32
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	89.23
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.17
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	89.13
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	89.05
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.0
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.39
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.37
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.3
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	88.18
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.18
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.06
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	87.85
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	87.79
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	87.44
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	87.36
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	86.97
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	86.8
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.53
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	86.06
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	85.99
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	85.8
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.42
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.41
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.37
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.3
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.28
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.91
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	84.77
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	84.6
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	84.55
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	84.53
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	84.48
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	84.3
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	84.2
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	84.15
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	83.91
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	83.6
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	83.52
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	82.92
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	82.7
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	82.39
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	82.05
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	81.88
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	81.39
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	80.76
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	80.38
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.26

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.4e-52  Score=377.96  Aligned_cols=249  Identities=26%  Similarity=0.369  Sum_probs=222.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                .+.++.++++|+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~----------------~g~~~~~~~~Dv   64 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK----------------YGVETMAFRCDV   64 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HCCCEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH----------------hCCcEEEEEccC
Confidence            4789999999999999999999999999999999999999999999888664                346788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|+||+||||||+.. ..++.+++.++|++.+++|+.++++++|.++|+|+++ +.|+||+++|
T Consensus        65 ~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i~S  142 (251)
T d1vl8a_          65 SNYEEVKKLLEAVKEKFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-DNPSIINIGS  142 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-SSCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-cccccccccc
Confidence            9999999999999999999999999999876 6899999999999999999999999999999999987 6899999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      ..+...+.+...+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|.......  ++.      ..+...+.+++
T Consensus       143 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~------~~~~~~~~pl~  214 (251)
T d1vl8a_         143 LTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEK------LDYMLKRIPLG  214 (251)
T ss_dssp             GGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHH------HHHHHHTCTTS
T ss_pred             chhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC--HHH------HHHHHhcCCCC
Confidence            7455667788899999999999999999999999999999999999999987432211  000      12233456788


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+..|+|++..+.||+++...++||+.+.+||+|.
T Consensus       215 R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         215 RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcCee
Confidence            99999999999999999999999999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.8e-52  Score=377.84  Aligned_cols=248  Identities=21%  Similarity=0.341  Sum_probs=223.3

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      +++|+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++
T Consensus         4 ~d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~-----------------~g~~~~~~~   66 (255)
T d1fmca_           4 SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ-----------------LGGQAFACR   66 (255)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEE
T ss_pred             CCCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-----------------cCCcEEEEE
Confidence            456899999999999999999999999999999999999999999999999876                 456789999


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      ||++|+++++++++++.+++|+||+||||||+.. ..++ +.+.++|++++++|+.|+++++|.++|+|+++ ++|+||+
T Consensus        67 ~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Ii~  143 (255)
T d1fmca_          67 CDITSEQELSALADFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILT  143 (255)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEE
T ss_pred             ccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccc-ccccccc
Confidence            9999999999999999999999999999999876 4555 78999999999999999999999999999988 6889999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      +||. ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++.......   +.      ..+...+.
T Consensus       144 isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---e~------~~~~~~~~  213 (255)
T d1fmca_         144 ITSM-AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---EI------EQKMLQHT  213 (255)
T ss_dssp             ECCG-GGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---HH------HHHHHHTC
T ss_pred             cccc-chhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH---HH------HHHHHhcC
Confidence            9987 67888999999999999999999999999999999999999999999987543321   11      12233456


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +++|+..|+|++.++.||+++...++||+.+..||+|.
T Consensus       214 pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  251 (255)
T d1fmca_         214 PIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCcc
Confidence            78899999999999999999999999999999999984

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.6e-52  Score=379.32  Aligned_cols=250  Identities=24%  Similarity=0.311  Sum_probs=222.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+..               .+.++.+++||++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~---------------~~~~~~~~~~Dvt   65 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA---------------PDAEVLTTVADVS   65 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTCCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC---------------CCCeEEEEeccCC
Confidence            5799999999999999999999999999999999999999999988887642               2457899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||+..+..++.+++.++|++++++|+.|+++++|+++|+|+++ ++|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~  144 (258)
T d1iy8a_          66 DEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASV  144 (258)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccH
Confidence            99999999999999999999999999987546789999999999999999999999999999999987 68999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-----HH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----AR  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~  264 (368)
                       ++..+.|...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.......       .....+++.     ..
T Consensus       145 -~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~-------~~~~~~~~~~~~~~~~  216 (258)
T d1iy8a_         145 -GGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQ-------LDPENPRKAAEEFIQV  216 (258)
T ss_dssp             -GGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHH-------HCTTCHHHHHHHHHTT
T ss_pred             -hhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhh-------cCcccHHHHHHHHHhc
Confidence             67788999999999999999999999999999999999999999999987432111       111122332     23


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++|+..|+|++..+.||+++...++||+.+.+||+|.
T Consensus       217 ~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         217 NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             CTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence            467888999999999999999999999999999999884

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.1e-51  Score=374.49  Aligned_cols=254  Identities=23%  Similarity=0.330  Sum_probs=225.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++||
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~D   65 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS-----------------KGFKVEASVCD   65 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCEEEEEECC
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCCceEEEee
Confidence            4689999999999999999999999999999999999999999999999876                 45688899999


Q ss_pred             CCCHHHHHHHHHHHHhHcC-CCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          108 VCEPADVQKLSNFAVNEFG-SIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g-~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      ++|+++++++++++.++++ ++|+||||||+.. ..++.+.+.|+|++++++|+.++++++|.++|+|+++ +.|+||++
T Consensus        66 v~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~i  143 (259)
T d2ae2a_          66 LSSRSERQELMNTVANHFHGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFI  143 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-cccccccc
Confidence            9999999999999999987 7999999999977 6889999999999999999999999999999999988 68999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      +|. ++..+.|+...|++||+|+++|+|+|+.|++++|||||+|+||+|+|++...........  ..   ..+...+.+
T Consensus       144 sS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~--~~---~~~~~~~~p  217 (259)
T d2ae2a_         144 SSV-SGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQK--EN---LNKLIDRCA  217 (259)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHH--HH---HHHHHHTST
T ss_pred             ccc-ccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhH--HH---HHHHHhcCC
Confidence            998 677888999999999999999999999999999999999999999999875422211100  00   122344577


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCC
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ  306 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  306 (368)
                      ++|+..|+|++..+.||+++...++||+.+..||+|....
T Consensus       218 l~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~a~~  257 (259)
T d2ae2a_         218 LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGGLMANC  257 (259)
T ss_dssp             TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCeEeeC
Confidence            8999999999999999999999999999999999986543

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.1e-51  Score=374.60  Aligned_cols=247  Identities=22%  Similarity=0.308  Sum_probs=219.6

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+++++|++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~-----------------~g~~~~~~~~   66 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS-----------------FGYESSGYAG   66 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT-----------------TTCCEEEEEC
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEc
Confidence            34678999999999999999999999999999999999999999999998865                 3567899999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|+||+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+++ ++|+||++
T Consensus        67 Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVni  144 (251)
T d2c07a1          67 DVSKKEEISEVINKILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINI  144 (251)
T ss_dssp             CTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHhcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEE
Confidence            999999999999999999999999999999987 6888999999999999999999999999999999988 68999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.++..+|++||+|+++|+|+|+.|++++|||||+|+||+|+|+|.......    ..      .+...+.+
T Consensus       145 sS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~----~~------~~~~~~~p  213 (251)
T d2c07a1         145 SSI-VGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQ----IK------KNIISNIP  213 (251)
T ss_dssp             CCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHH----HH------HHHHTTCT
T ss_pred             CCH-HhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHH----HH------HHHHhcCC
Confidence            998 56778899999999999999999999999999999999999999999987543211    11      22233467


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ++|+..|+|++.++.||+++...+++|+.+..||+|.
T Consensus       214 l~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         214 AGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSC
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCcC
Confidence            8899999999999999999999999999999999874

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.9e-51  Score=373.23  Aligned_cols=254  Identities=21%  Similarity=0.242  Sum_probs=214.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+.                .+.++.+++||++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~----------------~g~~~~~~~~Dv~   65 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ----------------HGVKVLYDGADLS   65 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH----------------HTSCEEEECCCTT
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh----------------cCCcEEEEECCCC
Confidence            689999999999999999999999999999999997 56677777777654                3467899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ +.|+||++||.
T Consensus        66 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~isS~  143 (260)
T d1x1ta1          66 KGEAVRGLVDNAVRQMGRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQ-GFGRIINIASA  143 (260)
T ss_dssp             SHHHHHHHHHHHHHHHSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhc-CCceEeecccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhh-hhhc-CCHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF-NIIC-ELPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~-~~pe~~a~~~~  267 (368)
                       ++..+.|+..+|++||+|+++|+++|+.|++++|||||+|+||+|+|||.........+... .... .........++
T Consensus       144 -~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl  222 (260)
T d1x1ta1         144 -HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS  222 (260)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred             -cceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence             67888999999999999999999999999999999999999999999997553321111100 0000 00112345678


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|++..+.||+++...++||+.+..||+|.
T Consensus       223 ~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcchh
Confidence            899999999999999999999999999999999985

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=5.7e-51  Score=371.56  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=198.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+                 .+.++.++.||
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~D   65 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK-----------------KGFQVTGSVCD   65 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECC
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCceEEEecc
Confidence            4688999999999999999999999999999999999999999999998876                 34679999999


Q ss_pred             CCCHHHHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          108 VCEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      ++++++++++++++.+++ |++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++|+++|+|+++ +.|+||++
T Consensus        66 v~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Iv~i  143 (259)
T d1xq1a_          66 ASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKAS-GCGNIIFM  143 (259)
T ss_dssp             TTSHHHHHHHHHHHHHHHTTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHhCCCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccc-cccccccc
Confidence            999999999999999998 78999999999987 6899999999999999999999999999999999987 68999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.+...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||........   .      ......+.+
T Consensus       144 sS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~---~------~~~~~~~~p  213 (259)
T d1xq1a_         144 SSI-AGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDE---F------KKVVISRKP  213 (259)
T ss_dssp             C-----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC------------------------------
T ss_pred             ccc-cccccccccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHH---H------HHHHHhCCC
Confidence            998 677888899999999999999999999999999999999999999999875432211   1      122345678


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      ++|+..|+|++..+.||+++...++||+.+..||+|...
T Consensus       214 l~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         214 LGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTVN  252 (259)
T ss_dssp             ----CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCEEET
T ss_pred             CCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCEECC
Confidence            899999999999999999999999999999999998654

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.4e-52  Score=373.28  Aligned_cols=241  Identities=24%  Similarity=0.377  Sum_probs=217.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                    .+..++++|++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--------------------~~~~~~~~Dv~   60 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--------------------ANGKGLMLNVT   60 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--------------------GGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--------------------CCCcEEEEEec
Confidence            5899999999999999999999999999999999999999888777653                    35678999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||... ..++.+.+.++|++.+++|+.++++++|+++|+|+++ ++|+||++||.
T Consensus        61 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~  138 (243)
T d1q7ba_          61 DPASIESVLEKIRAEFGEVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSV  138 (243)
T ss_dssp             CHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHhhhhhhhhhcccCCcceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecch
Confidence            999999999999999999999999999987 6899999999999999999999999999999999987 58999999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++.++|++||+|+++|+++|+.|++++|||||+|+||+|+|++.........          .+...+.+++|
T Consensus       139 -~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~----------~~~~~~~pl~R  207 (243)
T d1q7ba_         139 -VGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQR----------AGILAQVPAGR  207 (243)
T ss_dssp             -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHH----------HHHHTTCTTSS
T ss_pred             -hhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHH----------HHHHhcCCCCC
Confidence             5677889999999999999999999999999999999999999999998754332111          22233466888


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..|+|+++.+.||+++...++||+.+..||+|+
T Consensus       208 ~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         208 LGGAQEIANAVAFLASDEAAYITGETLHVNGGMY  241 (243)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred             CCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeE
Confidence            9999999999999999999999999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.9e-51  Score=371.56  Aligned_cols=251  Identities=24%  Similarity=0.356  Sum_probs=218.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.+++||+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~--------------------~~~~~~~~~Dv   60 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI--------------------GPAACAIALDV   60 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH--------------------CTTEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCceEEEEeeC
Confidence            6789999999999999999999999999999999999999988877765                    24678899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++.+++|+.|+++++|+++|.|.+++++|+||++||
T Consensus        61 t~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS  139 (256)
T d1k2wa_          61 TDQASIDRCVAELLDRWGSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMAS  139 (256)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccc
Confidence            9999999999999999999999999999987 689999999999999999999999999999998877656899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhh--cCCHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNII--CELPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~~pe~~a~~~  266 (368)
                      . ++..+.+..++|++||+|+++|+++|+.|++++|||||+|+||+|+|++.........+. ....  ....+.....+
T Consensus       140 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P  217 (256)
T d1k2wa_         140 Q-AGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADY-ENLPRGEKKRQVGAAVP  217 (256)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHH-HTCCTTHHHHHHHHHST
T ss_pred             h-hhccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhh-ccCChHHHHHHHHhcCC
Confidence            8 678899999999999999999999999999999999999999999999875322111100 0000  00122334567


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ++|+..|+|++..+.||+++...++||+.+..||+.
T Consensus       218 lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~  253 (256)
T d1k2wa_         218 FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGGN  253 (256)
T ss_dssp             TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcch
Confidence            889999999999999999999999999999999874

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=6.6e-51  Score=371.55  Aligned_cols=253  Identities=19%  Similarity=0.291  Sum_probs=221.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++||++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~Dv~   64 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE-----------------KGVEARSYVCDVT   64 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT-----------------TTSCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEccCC
Confidence            58999999999999999999999999999999999999999999888865                 4567899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||...+..++.+++.++|++.+++|+.++++++|+++|+|+++ +.|+||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~  143 (260)
T d1zema1          65 SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASM  143 (260)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCH
T ss_pred             CHHHHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeech
Confidence            99999999999999999999999999987646789999999999999999999999999999999987 68999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhh-hhhhhcCCHHHHHH----
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQ-MFNIICELPETVAR----  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~pe~~a~----  264 (368)
                       ++..+.|...+|++||+|+++|+++|+.|++++|||||+|+||+|+|++........... ........|+..++    
T Consensus       144 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T d1zema1         144 -AGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIG  222 (260)
T ss_dssp             -HHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHH
T ss_pred             -hhccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHh
Confidence             677888999999999999999999999999999999999999999999875422111111 11112234555544    


Q ss_pred             -HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCc
Q 017635          265 -TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGR  301 (368)
Q Consensus       265 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~  301 (368)
                       .+++|+..|+|++..+.||+++...++||+.+.+||+
T Consensus       223 ~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         223 SVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             TSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             cCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence             4577889999999999999999999999999988874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.2e-51  Score=369.58  Aligned_cols=237  Identities=23%  Similarity=0.329  Sum_probs=216.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                    .++.+++||++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~~Dv~   62 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--------------------DAARYVHLDVT   62 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--------------------GGEEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--------------------CcceEEEeecC
Confidence            6899999999999999999999999999999999999998887776652                    35778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||... ..++.+++.++|++++++|+.|+++++|.++|+|+++ +.|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~  140 (244)
T d1nffa_          63 QPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSI  140 (244)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999987 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.+...+|++||+|+++|+|+|+.|++++|||||+|+||+|+|||.....               +...+.+++|
T Consensus       141 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---------------~~~~~~pl~R  204 (244)
T d1nffa_         141 -EGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP---------------EDIFQTALGR  204 (244)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC---------------TTCSCCSSSS
T ss_pred             -ccccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh---------------HHHHhccccC
Confidence             677889999999999999999999999999999999999999999999864321               2223456788


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +..|+|++..+.||+++...++||+.+..||++..
T Consensus       205 ~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~~a  239 (244)
T d1nffa_         205 AAEPVEVSNLVVYLASDESSYSTGAEFVVDGGTVA  239 (244)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhChhhCCCcCCEEEECCCeec
Confidence            88999999999999999999999999999999864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=5.5e-51  Score=371.09  Aligned_cols=251  Identities=22%  Similarity=0.330  Sum_probs=220.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.+++||++|+++
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~-----------------~g~~~~~~~~Dv~~~~~   64 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ-----------------AGGHAVAVKVDVSDRDQ   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTSHHH
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeCCCHHH
Confidence            7889999999999999999999999999999999999999999876                 45688999999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++++.++||+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|.+++++++|+++||. ++.
T Consensus        65 v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~-~~~  142 (255)
T d1gega_          65 VFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ-AGH  142 (255)
T ss_dssp             HHHHHHHHHHHTTCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG-GGT
T ss_pred             HHHHHHHHHHHhCCccEEEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccch-hhc
Confidence            99999999999999999999999977 6899999999999999999999999999999998887678899999987 678


Q ss_pred             CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhc-CCHHHHHHHhhhhhhh
Q 017635          194 SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIIC-ELPETVARTLVPRIRV  272 (368)
Q Consensus       194 ~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~pe~~a~~~~~~~~~  272 (368)
                      .+.|..+.|++||+|+++|+++|+.|++++|||||+|+||+|+||+.........+....... ...+...+.+++|+..
T Consensus       143 ~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~  222 (255)
T d1gega_         143 VGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSE  222 (255)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBC
T ss_pred             ccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcC
Confidence            889999999999999999999999999999999999999999999875432211111100000 0123344567889999


Q ss_pred             cccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          273 VKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       273 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+|++..+.||+++...++||+.+..||+|.
T Consensus       223 peevA~~v~fL~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         223 PEDVAACVSYLASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHHHHHHHhCchhCCccCcEEEecCCEE
Confidence            9999999999999999999999999999874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=7e-51  Score=371.24  Aligned_cols=248  Identities=24%  Similarity=0.329  Sum_probs=219.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.+++++                 .+.++.+++||+
T Consensus         4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~-----------------~g~~~~~~~~Dv   66 (261)
T d1geea_           4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK-----------------VGGEAIAVKGDV   66 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHh-----------------cCCcEEEEEccC
Confidence            689999999999999999999999999999999999854 57777777765                 456889999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++.+++|+.|+++++|+++|+|++++.+++|+++||
T Consensus        67 t~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS  145 (261)
T d1geea_          67 TVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS  145 (261)
T ss_dssp             TSHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcccccccccccccc
Confidence            9999999999999999999999999999987 688999999999999999999999999999999998866778999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.|...+|++||+|+++|+++|+.|++++|||||+|+||+|+||+.......  ++.      ..+.....+++
T Consensus       146 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~--~~~------~~~~~~~~pl~  216 (261)
T d1geea_         146 V-HEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--PEQ------RADVESMIPMG  216 (261)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--HHH------HHHHHTTCTTS
T ss_pred             c-hhcccCccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC--HHH------HHHHHhcCCCC
Confidence            7 67888999999999999999999999999999999999999999999986432111  010      11223345788


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      |+..|+|+++++.||+++...++||+.+..||++.-
T Consensus       217 R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~sl  252 (261)
T d1geea_         217 YIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL  252 (261)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCeeC
Confidence            999999999999999999999999999999998743

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=6.5e-51  Score=369.60  Aligned_cols=245  Identities=22%  Similarity=0.317  Sum_probs=218.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++..                  +.++.+++||++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~Dv~   64 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT------------------PDQIQFFQHDSS   64 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC------------------CCcEEEEEccCC
Confidence            58999999999999999999999999999999999999998888777632                  357889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||... ..++.+.+.++|++++++|+.|+++++|+++|+|++++.+++||++||.
T Consensus        65 ~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~  143 (251)
T d1zk4a1          65 DEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI  143 (251)
T ss_dssp             CHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988666799999997


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHH--hCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKE--SKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e--~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                       ++..+.|...+|++||+|+.+|+++++.|  ++++|||||+|+||+|+|++........  ....       ...+.++
T Consensus       144 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~-------~~~~~pl  213 (251)
T d1zk4a1         144 -EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAE--EAMS-------QRTKTPM  213 (251)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHH--HHHT-------STTTCTT
T ss_pred             -ceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHH--HHHH-------HHhCCCC
Confidence             67788899999999999999999999998  6789999999999999999975533211  1111       1124578


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|++..+.||+++...++||+.+..||+|.
T Consensus       214 ~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         214 GHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcccc
Confidence            899999999999999999999999999999999984

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.3e-50  Score=366.68  Aligned_cols=242  Identities=21%  Similarity=0.311  Sum_probs=205.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++.  ..+.+++                 .+.++.+++||++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~--~~~~~~~-----------------~g~~~~~~~~Dvs   62 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPE--AEAAIRN-----------------LGRRVLTVKCDVS   62 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHH--HHHHHHH-----------------TTCCEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHH--HHHHHHH-----------------cCCcEEEEEeeCC
Confidence            58999999999999999999999999999999999987532  2233333                 3568899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++.+++|+.|+++++|+++|+|+++ ++|+||++||.
T Consensus        63 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Iv~isS~  140 (247)
T d2ew8a1          63 QPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRN-GWGRIINLTST  140 (247)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhc-CCCCccccccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH--HHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA--RTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a--~~~~  267 (368)
                       ++..+.|...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|++..........          +...  ..++
T Consensus       141 -~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~----------~~~~~~~~~l  209 (247)
T d2ew8a1         141 -TYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMF----------DVLPNMLQAI  209 (247)
T ss_dssp             -GGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------------CTTSSS
T ss_pred             -hhcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhH----------HHHHHHhccC
Confidence             67788899999999999999999999999999999999999999999987543221111          1111  1357


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|++..+.||+++...++||+.+..||+|.
T Consensus       210 ~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         210 PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSCC
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCEe
Confidence            788899999999999999999999999999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-50  Score=365.94  Aligned_cols=239  Identities=22%  Similarity=0.253  Sum_probs=212.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+++||++|||||++|||+++|++|+++|++|++++|++++++++.+++                      +..+++||+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~----------------------~~~~~~~Dv   58 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----------------------GAHPVVMDV   58 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------------TCEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----------------------CCeEEEEec
Confidence            6789999999999999999999999999999999999998887665443                      356789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++.+++|+.|+++++|+++|+|+++ ++++|+++||
T Consensus        59 ~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~~~i~~~ss  136 (242)
T d1ulsa_          59 ADPASVERGFAEALAHLGRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREK-NPGSIVLTAS  136 (242)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhcccccccc-ccceeeeecc
Confidence            9999999999999999999999999999987 6899999999999999999999999999999999987 5778888776


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      .  +..+.++..+|++||+|+++|+++|+.|++++|||||+|+||+|+|++........          ..+.....+++
T Consensus       137 ~--~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~----------~~~~~~~~pl~  204 (242)
T d1ulsa_         137 R--VYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKV----------REKAIAATPLG  204 (242)
T ss_dssp             G--GGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHH----------HHHHHHTCTTC
T ss_pred             c--cccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHH----------HHHHHhcCCCC
Confidence            4  56678889999999999999999999999999999999999999999975432111          12334556788


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+..|+|+++.+.||+++...++||+.+..||+|.
T Consensus       205 R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         205 RAGKPLEVAYAALFLLSDESSFITGQVLFVDGGRT  239 (242)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCcc
Confidence            99999999999999999999999999999999874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=9.5e-51  Score=370.01  Aligned_cols=248  Identities=26%  Similarity=0.350  Sum_probs=218.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .||++|||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.++.++++|++|+
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~-----------------~g~~~~~~~~Dvs~~   63 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE-----------------AGVEADGRTCDVRSV   63 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeecCCH
Confidence            489999999999999999999999999999999999999999999876                 456899999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHH--HcCCCCcEEEEEcCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVM--RDQPKGGHIFNMDGA  189 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m--~~~~~~g~Iv~isS~  189 (368)
                      ++++++++++.++||+||+||||||+.. ..++.+++.|+|++++++|+.|+++++|+++|+|  +++ +.|+||+++|.
T Consensus        64 ~~v~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~-~~g~Ii~i~S~  141 (257)
T d2rhca1          64 PEIEALVAAVVERYGPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLER-GTGRIVNIAST  141 (257)
T ss_dssp             HHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHH-TEEEEEEECCG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhc-CCccccccccc
Confidence            9999999999999999999999999987 6899999999999999999999999999999974  444 57899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH-----HH
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV-----AR  264 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~-----a~  264 (368)
                       ++..+.|+..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|||........    .......+++.     .+
T Consensus       142 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~----~~~~~~~~~e~~~~~~~~  216 (257)
T d2rhca1         142 -GGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHY----SDIWEVSTEEAFDRITAR  216 (257)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHH----HHHTTCCHHHHHHHHHTT
T ss_pred             -ccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhh----hhhcccChHHHHHHHHhc
Confidence             678889999999999999999999999999999999999999999999875422111    11111123332     33


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .+++|+..|+|++..+.||+|+...++||+.+..||++.
T Consensus       217 ~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         217 VPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             STTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             CCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcCcc
Confidence            557889999999999999999999999999999999863

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.6e-50  Score=367.18  Aligned_cols=242  Identities=28%  Similarity=0.359  Sum_probs=216.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++                    +.++.+++||++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~--------------------~~~~~~~~~Dv~   61 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL--------------------GDAARYQHLDVT   61 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT--------------------GGGEEEEECCTT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--------------------CCceEEEEcccC
Confidence            589999999999999999999999999999999999999887766654                    346889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||+.. ..++.+.+.++|++.+++|+.|+++++|+++|+|+++ +.|+||++||.
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~  139 (254)
T d1hdca_          62 IEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSA  139 (254)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999987 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.++.++|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|..+......+          +...+.+++|
T Consensus       140 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~----------~~~~~~pl~R  208 (254)
T d1hdca_         140 -AGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGE----------GNYPNTPMGR  208 (254)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCST----------TSCTTSTTSS
T ss_pred             -hhcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHH----------HHHhCCCCCC
Confidence             67888999999999999999999999999999999999999999999987543322111          1122456778


Q ss_pred             hh-hcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          270 IR-VVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       270 ~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      +. .|+|++.++.||+++...++||+.+..||+|..
T Consensus       209 ~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG~t~  244 (254)
T d1hdca_         209 VGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTT  244 (254)
T ss_dssp             CB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTTTTT
T ss_pred             CCCCHHHHHHHHHHHhchhhCCCCCceEEeCCCccC
Confidence            76 589999999999999999999999999999854

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.9e-50  Score=362.38  Aligned_cols=242  Identities=21%  Similarity=0.284  Sum_probs=210.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++                      ...+++||++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~----------------------~~~~~~~Dv~   58 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI----------------------GGAFFQVDLE   58 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH----------------------TCEEEECCTT
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc----------------------CCeEEEEeCC
Confidence            579999999999999999999999999999999999987543 22221                      2356899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.|+++++|+++|+|+++ ++|+||+++|.
T Consensus        59 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~  136 (248)
T d2d1ya1          59 DERERVRFVEEAAYALGRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASV  136 (248)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHhcCCCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-ccccccccccc
Confidence            999999999999999999999999999987 6899999999999999999999999999999999988 68999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc--hhhhhhhhcCCHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQMFNIICELPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~~~pe~~a~~~~  267 (368)
                       ++..+.+...+|++||+|+++|+++|+.|++++|||||+|+||+|+||+........  .+..      ........++
T Consensus       137 -~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~------~~~~~~~~pl  209 (248)
T d2d1ya1         137 -QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERT------RRDWEDLHAL  209 (248)
T ss_dssp             -GGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------------CHHHHTTSTT
T ss_pred             -cccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHH------HHHHHhcCCC
Confidence             678889999999999999999999999999999999999999999999875321110  0000      1122234567


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|+++.+.||+++...++||+.+..||+|.
T Consensus       210 ~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         210 RRLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcCcc
Confidence            889999999999999999999999999999999884

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-50  Score=366.60  Aligned_cols=245  Identities=24%  Similarity=0.333  Sum_probs=211.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     .++.++.||++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~---------------------~~~~~~~~Dvs   61 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---------------------PGAVFILCDVT   61 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------------------TTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEccCC
Confidence            689999999999999999999999999999999999998887665543                     24678999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.++||+||+||||||......++++.+.++|++++++|+.|+++++|+++|+|+++  +|+||++||.
T Consensus        62 ~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~  139 (250)
T d1ydea1          62 QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSL  139 (250)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCH
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccc
Confidence            99999999999999999999999999986545678899999999999999999999999999999865  5899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                       ++..+.+...+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.........+.. ..   ..+.....+++|
T Consensus       140 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~-~~---~~~~~~~~pl~R  214 (250)
T d1ydea1         140 -VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR-AS---IREGMLAQPLGR  214 (250)
T ss_dssp             -HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHH-HH---HHHHHHTSTTSS
T ss_pred             -cccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHH-HH---HHHHHhcCCCCC
Confidence             5677889999999999999999999999999999999999999999998753221111000 00   123334567889


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..|+|++.++.||+|+ +.++||+.+..||++.
T Consensus       215 ~g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         215 MGQPAEVGAAAVFLASE-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             CBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTTT
T ss_pred             CCCHHHHHHHHHHHhCc-cCCCcCCeEEECCCcc
Confidence            99999999999999987 7799999999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-49  Score=358.71  Aligned_cols=240  Identities=21%  Similarity=0.284  Sum_probs=210.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     ..+.++.||+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---------------------~~~~~~~~Dv   59 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---------------------PGIEPVCVDL   59 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEEeC
Confidence            6799999999999999999999999999999999999998887766553                     2466789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|++++++++    +++|+||+||||||+.. ..++.+.+.++|++.+++|+.++++++|.++|.|.+++.+|+||+++|
T Consensus        60 ~~~~~v~~~~----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS  134 (242)
T d1cyda_          60 GDWDATEKAL----GGIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS  134 (242)
T ss_dssp             TCHHHHHHHH----TTCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHH----HHcCCCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccch
Confidence            9999987655    56799999999999977 689999999999999999999999999999998776656899999998


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.|+..+|++||+|+.+|+|+|+.|++++|||||+|+||+|+|++.......  ++.      ..+...+.+++
T Consensus       135 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~------~~~~~~~~pl~  205 (242)
T d1cyda_         135 M-VAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEF------ARKLKERHPLR  205 (242)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHH------HHHHHHHSTTS
T ss_pred             h-hccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC--HHH------HHHHHhcCCCC
Confidence            7 67788999999999999999999999999999999999999999999986542211  111      12233456788


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+..|+|++..+.||+++...++||+.+..||+|.
T Consensus       206 R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         206 KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhcCcCCceEEeCcchh
Confidence            99999999999999999999999999999999985

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.9e-50  Score=361.20  Aligned_cols=239  Identities=23%  Similarity=0.399  Sum_probs=213.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++||||||++|||+++|++|+++|++|++. .|+++.++++.+++++                 .+.++.++++|++|++
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~Dv~~~~   64 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA-----------------YGGQAITFGGDVSKEA   64 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------HTCEEEEEECCTTSHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH-----------------cCCcEEEEeCCCCCHH
Confidence            589999999999999999999999999987 5677778888888765                 3568899999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      +++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.|+++++|+++|+|+++ ++|+||++||. ++
T Consensus        65 ~v~~~~~~~~~~~g~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~-~~  141 (244)
T d1edoa_          65 DVEAMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASV-VG  141 (244)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCT-HH
T ss_pred             HHHHHHHHHHHHcCCCCcccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcCh-hh
Confidence            999999999999999999999999987 6899999999999999999999999999999999987 68999999997 67


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhh
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRV  272 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~  272 (368)
                      ..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|.........          .+...+.+++|+..
T Consensus       142 ~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~----------~~~~~~~pl~R~~~  211 (244)
T d1edoa_         142 LIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDME----------KKILGTIPLGRTGQ  211 (244)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHH----------HHHHTSCTTCSCBC
T ss_pred             cCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHH----------HHHHhcCCCCCCcC
Confidence            77889999999999999999999999999999999999999999998754321111          12233467889999


Q ss_pred             cccccceeeecc-CHHHHHHHhhhhhcCCce
Q 017635          273 VKGSGKAINYLT-PPRILLALVTAWLRRGRW  302 (368)
Q Consensus       273 ~~~~~~~~~~l~-~~~~~~~~~~~~~~~g~~  302 (368)
                      |+|++..+.||+ +|...++||+.+..||++
T Consensus       212 p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         212 PENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             HHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             HHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            999999999996 999999999999999986

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=3.3e-49  Score=361.14  Aligned_cols=257  Identities=20%  Similarity=0.254  Sum_probs=207.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++...              .+.++.++++|++
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~~Dvt   67 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV--------------SEQNVNSVVADVT   67 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------------CcCceEEEEccCC
Confidence            58999999999999999999999999999999999999999999999876321              2356899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |+++++++++++.+++|+||+||||||...+   ..++.+.+.|+|++.+++|+.|+++++|+++|+|+++  +|.+|++
T Consensus        68 ~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~~  145 (264)
T d1spxa_          68 TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST--KGEIVNI  145 (264)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc--cCcceee
Confidence            9999999999999999999999999998542   2356677999999999999999999999999999876  4667777


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      +|+.++..+.|...+|++||+|+++|+++|+.|++++|||||+|+||+|+|+|.......... ...............+
T Consensus       146 ~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~~P  224 (264)
T d1spxa_         146 SSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEET-SKKFYSTMATMKECVP  224 (264)
T ss_dssp             CCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---------------HHHHHHHHHHCT
T ss_pred             eeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHH-HHHHHHHHHHHHhcCC
Confidence            776566788999999999999999999999999999999999999999999987543211110 0000000122334567


Q ss_pred             hhhhhhcccccceeeeccCHH-HHHHHhhhhhcCCcee
Q 017635          267 VPRIRVVKGSGKAINYLTPPR-ILLALVTAWLRRGRWF  303 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~g~~~  303 (368)
                      ++|+..|+|+++++.||+|++ ..+++|+.+..||++.
T Consensus       225 l~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         225 AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             CCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            889999999999999999965 7899999999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.3e-49  Score=360.34  Aligned_cols=249  Identities=20%  Similarity=0.252  Sum_probs=218.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                .+.++.+++||
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~----------------~g~~~~~~~~D   67 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE----------------FGVKTKAYQCD   67 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH----------------HTCCEEEEECC
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH----------------hCCceEEEEcc
Confidence            35899999999999999999999999999999999999999999988888664                34678999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.|+++++|.++|+|.++..+++|++++
T Consensus        68 v~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~  146 (260)
T d1h5qa_          68 VSNTDIVTKTIQQIDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTS  146 (260)
T ss_dssp             TTCHHHHHHHHHHHHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEee
Confidence            99999999999999999999999999999977 68999999999999999999999999999999997665788888887


Q ss_pred             CCCCCC------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH
Q 017635          188 GAGSGG------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET  261 (368)
Q Consensus       188 S~~~~~------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~  261 (368)
                      |.....      .+.++...|++||+|+.+|+++|+.|++++|||||+|+||+|+|++......    +.      ..+.
T Consensus       147 s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~----~~------~~~~  216 (260)
T d1h5qa_         147 SMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK----KI------RDHQ  216 (260)
T ss_dssp             CGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH----HH------HHHH
T ss_pred             ccccccccccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH----HH------HHHH
Confidence            753221      2335778999999999999999999999999999999999999998754321    11      1223


Q ss_pred             HHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          262 VARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       262 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..+.+++|+..|+|++..+.||+++...+++|+.+..||+|.
T Consensus       217 ~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         217 ASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             HHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             HhcCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCee
Confidence            445778999999999999999999999999999999999874

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=8.3e-49  Score=359.28  Aligned_cols=248  Identities=23%  Similarity=0.334  Sum_probs=213.4

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++..                  ...+.+++||++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~------------------~~~~~~~~~Dv~   64 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS------------------PDVISFVHCDVT   64 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC------------------TTTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC------------------CCceEEEEccCC
Confidence            68999999999999999999999999999999999999999988888743                  245778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |+++++++++++.+++|++|+||||||+... ...+.+.+.|+|++++++|+.|+++++|+++|+|+++ +.|+||+++|
T Consensus        65 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss  143 (268)
T d2bgka1          65 KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTAS  143 (268)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCcccccc
Confidence            9999999999999999999999999998652 2357889999999999999999999999999999988 6899999998


Q ss_pred             CCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHH---H
Q 017635          189 AGSGGSST-PLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVA---R  264 (368)
Q Consensus       189 ~~~~~~~~-~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a---~  264 (368)
                      .. +..+. +....|++||+|+++|+++|+.|++++|||||+|+||+|+||+..+.........        +...   .
T Consensus       144 ~~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~--------~~~~~~~~  214 (268)
T d2bgka1         144 IS-SFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRV--------EELAHQAA  214 (268)
T ss_dssp             GG-GTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHH--------HHHHHHTC
T ss_pred             cc-ccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHH--------HHHHHhcc
Confidence            74 44444 4456899999999999999999999999999999999999999765433222111        1111   1


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      .+.+|+..|+|++.++.||+++...++||+.+.+||+|...
T Consensus       215 ~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~t~~  255 (268)
T d2bgka1         215 NLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRT  255 (268)
T ss_dssp             SSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCcccC
Confidence            24568889999999999999999999999999999998543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-49  Score=363.96  Aligned_cols=254  Identities=23%  Similarity=0.370  Sum_probs=223.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +-+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++.....            .+.++.+++||
T Consensus         7 ~g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~------------~~~~~~~~~~D   74 (297)
T d1yxma1           7 PGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT------------KQARVIPIQCN   74 (297)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTT------------CCCCEEEEECC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccc------------cCceEEEEecc
Confidence            356899999999999999999999999999999999999999999999997743221            35689999999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|+++++++++++.+++|+||+||||||... ..++.+.+.++|++.+++|+.|+++++|+++|.|+++ ++++||++|
T Consensus        75 vs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~Ii~~s  152 (297)
T d1yxma1          75 IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKE-HGGSIVNII  152 (297)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHH-HCEEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccc-ccccccccc
Confidence            99999999999999999999999999999877 6899999999999999999999999999999999988 678899986


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      +.  ...+.|....|++||+|+++|+++|+.|++++|||||+|+||+|+|++.........+....      +...+.++
T Consensus       153 s~--~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~------~~~~~~pl  224 (297)
T d1yxma1         153 VP--TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFE------GSFQKIPA  224 (297)
T ss_dssp             CC--CTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGT------TGGGGSTT
T ss_pred             cc--ccccccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHH------HHHhcCCC
Confidence            64  45668889999999999999999999999999999999999999999876543332222211      22234678


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +|+..|+|++..+.||+|+...++||+.+..||++.
T Consensus       225 gR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         225 KRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             SSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence            999999999999999999999999999999999874

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.4e-49  Score=355.04  Aligned_cols=233  Identities=21%  Similarity=0.317  Sum_probs=200.5

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+++                            .++..+++|+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------------------------~~~~~~~~Dv   54 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------------------------KGLFGVEVDV   54 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------------------------TTSEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------------------------cCceEEEEec
Confidence            478999999999999999999999999999999999986542                            3467799999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|+||+||||||+.. ..++.+.+.|+|++++++|+.++++++|.++|+|+++ +.|+||++||
T Consensus        55 ~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS  132 (237)
T d1uzma1          55 TDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGS  132 (237)
T ss_dssp             TCHHHHHHHHHHHHHHHSSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHhcCCceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcc
Confidence            9999999999999999999999999999977 6899999999999999999999999999999999998 6899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++..+|++||+|+++|+++|+.|++++|||||+|+||+|+|++.........          .+.....+++
T Consensus       133 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~----------~~~~~~~pl~  201 (237)
T d1uzma1         133 V-SGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQ----------QGALQFIPAK  201 (237)
T ss_dssp             C-CC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHH----------HHHGGGCTTC
T ss_pred             h-hhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHH----------HHHHhcCCCC
Confidence            8 5778889999999999999999999999999999999999999999998754321111          1222345688


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      |+..|+|+++.+.||+++...++||+.+..||++
T Consensus       202 R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         202 RVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            8999999999999999999999999999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.4e-48  Score=353.94  Aligned_cols=254  Identities=22%  Similarity=0.333  Sum_probs=219.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++++                 .+.+++++.||+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~D~   64 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE-----------------KGLNVEGSVCDL   64 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCCceEEEeec
Confidence            578999999999999999999999999999999999999999999888876                 456788999999


Q ss_pred             CCHHHHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          109 CEPADVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++.++++++++++.+++ |++|+||||||... ..++.+++.++|++++++|+.++++++++++|.|.++ +.|+||++|
T Consensus        65 s~~~~~~~~~~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~is  142 (258)
T d1ae1a_          65 LSRTERDKLMQTVAHVFDGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLS  142 (258)
T ss_dssp             TCHHHHHHHHHHHHHHTTSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHhCCCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccc-ccccccccc
Confidence            99999999999999998 68999999999987 6899999999999999999999999999999999988 689999999


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                      |. ++..+.|...+|+++|+|+++|++.|++|++++|||||+|+||+|+|||........... ...   ..+...+.++
T Consensus       143 S~-~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~-~~~---~~~~~~~~pl  217 (258)
T d1ae1a_         143 SI-AGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQ-KEE---IDNFIVKTPM  217 (258)
T ss_dssp             CG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------C-HHH---HHHHHHHSTT
T ss_pred             cc-ccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhh-HHH---HHHHHhcCCC
Confidence            88 678889999999999999999999999999999999999999999999975533211100 000   1233445678


Q ss_pred             hhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCC
Q 017635          268 PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQ  306 (368)
Q Consensus       268 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~  306 (368)
                      +|+..|+|++..+.||+++...+++|+.+.+||+|....
T Consensus       218 gR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         218 GRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTANG  256 (258)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCS
T ss_pred             CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCCeeccC
Confidence            999999999999999999999999999999999986543

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-49  Score=355.82  Aligned_cols=240  Identities=21%  Similarity=0.302  Sum_probs=210.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +.|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                     ..+.++.+|+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~---------------------~~~~~~~~Dv   61 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---------------------PGIEPVCVDL   61 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---------------------TTCEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc---------------------CCCeEEEEeC
Confidence            5689999999999999999999999999999999999999888776654                     2367789999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|++++++++    +++|+||+||||||... ..++.+.+.++|++.+++|+.++++++|+++|.|.++.+.|+||++||
T Consensus        62 ~d~~~v~~~~----~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS  136 (244)
T d1pr9a_          62 GDWEATERAL----GSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS  136 (244)
T ss_dssp             TCHHHHHHHH----TTCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCHHHHHHHH----HHhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccc
Confidence            9999987765    56799999999999987 689999999999999999999999999999998765546899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.|...+|++||+|+++|+++|+.|++++|||||+|+||+|+|++......... .       ..+...+.+++
T Consensus       137 ~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~-~-------~~~~~~~~pl~  207 (244)
T d1pr9a_         137 Q-CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPH-K-------AKTMLNRIPLG  207 (244)
T ss_dssp             G-GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHH-H-------HHHHHTTCTTC
T ss_pred             c-cccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChH-H-------HHHHHhcCCCC
Confidence            8 6778889999999999999999999999999999999999999999998754332111 1       11223346788


Q ss_pred             hhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          269 RIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       269 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      |+..|+|+++.+.||+++...++||+.+..||+|.
T Consensus       208 R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             CCcCHHHHHHHHHHHhCchhCCcCCcEEEECccHh
Confidence            99999999999999999999999999999999984

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-48  Score=358.87  Aligned_cols=258  Identities=21%  Similarity=0.236  Sum_probs=214.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++...              .+.++.+++||++
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~--------------~~~~~~~~~~Dvs   67 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGV--------------SEKQVNSVVADVT   67 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--------------CCCceEEEEccCC
Confidence            68999999999999999999999999999999999999999999998875311              2357899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCC----CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEE
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL----LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFN  185 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~  185 (368)
                      |+++++++++++.+++|+||+||||||... ..++    .+.+.++|++.+++|+.++++++|+++|+|+++  +|.+|+
T Consensus        68 ~~~~v~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~--~g~iI~  144 (272)
T d1xkqa_          68 TEDGQDQIINSTLKQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS--KGEIVN  144 (272)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEE
T ss_pred             CHHHHHHHHHHHHHHhCCceEEEeCCcccC-cccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc--CCcccc
Confidence            999999999999999999999999999876 3333    467888999999999999999999999999875  355666


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      ++|+.++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|........... ..............
T Consensus       145 ~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~  223 (272)
T d1xkqa_         145 VSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQAS-QKFYNFMASHKECI  223 (272)
T ss_dssp             ECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHH-HHHHHHHHHCTTTC
T ss_pred             ccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHH-HHHHHHHHHHhcCC
Confidence            66654678889999999999999999999999999999999999999999999875433211100 00000001111235


Q ss_pred             hhhhhhhcccccceeeeccCHHH-HHHHhhhhhcCCceecC
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRI-LLALVTAWLRRGRWFDD  305 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~g~~~~~  305 (368)
                      +++|+..|+|+++.+.||++++. .++||+.+..||++.--
T Consensus       224 PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         224 PIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             TTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHHh
Confidence            67899999999999999999875 57999999999988543

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.6e-49  Score=358.41  Aligned_cols=245  Identities=16%  Similarity=0.206  Sum_probs=212.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.                    .+..++++|++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~Dv~   62 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--------------------ERSMFVRHDVS   62 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--------------------TTEEEECCCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--------------------CCeEEEEeecC
Confidence            6899999999999999999999999999999999999999888777652                    35778999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |+++++++++++.+++|++|+||||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|+++  +|+||++||.
T Consensus        63 ~~~~~~~~~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~  139 (253)
T d1hxha_          63 SEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASV  139 (253)
T ss_dssp             CHHHHHHHHHHHHHHHCSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccch
Confidence            999999999999999999999999999987 6889999999999999999999999999999999754  6999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCcccccCcccc-hhhhhhhhcCCHHHHHHHh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQ-NKQMFNIICELPETVARTL  266 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~pe~~a~~~  266 (368)
                       ++..+.+...+|++||+|+.+|+++++.|+++  +|||||+|+||+|+|++........ .++...   ..   ....+
T Consensus       140 -~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~---~~---~~~~~  212 (253)
T d1hxha_         140 -SSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVL---HD---PKLNR  212 (253)
T ss_dssp             -GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHB---CB---TTTBT
T ss_pred             -hhhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHH---hC---ccccc
Confidence             67888999999999999999999999999987  4599999999999999875422111 111110   00   01234


Q ss_pred             hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          267 VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                      ++|+..|+|++..+.||+++...++||+.+..||+|.-
T Consensus       213 ~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~~  250 (253)
T d1hxha_         213 AGRAYMPERIAQLVLFLASDESSVMSGSELHADNSILG  250 (253)
T ss_dssp             TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSSCTT
T ss_pred             cCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECccHhh
Confidence            56778899999999999999999999999999999853

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.5e-48  Score=357.05  Aligned_cols=257  Identities=20%  Similarity=0.229  Sum_probs=216.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+...              ...++.+++||++
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~--------------~~~~~~~~~~Dv~   66 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV--------------PAEKINAVVADVT   66 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--------------CGGGEEEEECCTT
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC--------------CCcceEEEEeeCC
Confidence            57999999999999999999999999999999999999999999999876321              2357899999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      |+++++++++++.++||+||+||||||.... ..+..+.+.|+|++.+++|+.++++++|+++|+|+++ ++|+|+++||
T Consensus        67 ~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~ii~~ss  145 (274)
T d1xhla_          67 EASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSI  145 (274)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccccccccc-ccccccchhh
Confidence            9999999999999999999999999997542 2345667899999999999999999999999999987 5788888877


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch--hhhhhhhcCCHHHHHHHh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN--KQMFNIICELPETVARTL  266 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~pe~~a~~~  266 (368)
                      . ++..+.++..+|++||+|+.+|+++|+.|++++|||||+|+||+|+||+.........  +......   .+.....|
T Consensus       146 ~-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~---~~~~~~iP  221 (274)
T d1xhla_         146 V-AGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFI---GSRKECIP  221 (274)
T ss_dssp             G-GSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH---HHCTTTCT
T ss_pred             h-hccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHH---HHHHcCCC
Confidence            6 5777889999999999999999999999999999999999999999998754322111  1111100   01112357


Q ss_pred             hhhhhhcccccceeeeccCH-HHHHHHhhhhhcCCceecC
Q 017635          267 VPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       267 ~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~~~  305 (368)
                      ++|+..|+|++..+.||+|+ ...++||+.+..||++.-.
T Consensus       222 lgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~l~  261 (274)
T d1xhla_         222 VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLV  261 (274)
T ss_dssp             TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             CCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCHHHh
Confidence            88999999999999999996 6889999999999988543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=9.8e-48  Score=353.43  Aligned_cols=252  Identities=21%  Similarity=0.193  Sum_probs=208.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++                    +.++.++.+|+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~--------------------~~~~~~~~~Dv   60 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH--------------------GDNVLGIVGDV   60 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--------------------GGGEEEEECCT
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc--------------------CCCeeEEeccc
Confidence            6789999999999999999999999999999999999998887766553                    24688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCC----CCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFK----PLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~----~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +++++++++++++.+++|++|++|||||+.....    ...+.+.++|++++++|+.|+++++|+++|+|+++  +|+||
T Consensus        61 ~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~g~iI  138 (276)
T d1bdba_          61 RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS--RGNVI  138 (276)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEE
T ss_pred             ccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc--CCCce
Confidence            9999999999999999999999999999865222    23455567899999999999999999999999876  47889


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      +++|. ++..+.++.++|++||+|+.+|+|+|+.|+++. ||||+|+||+|+|+|.........................
T Consensus       139 ~i~S~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (276)
T d1bdba_         139 FTISN-AGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV  216 (276)
T ss_dssp             EECCG-GGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT
T ss_pred             eeeec-hhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc
Confidence            98887 577888999999999999999999999999975 9999999999999987543322111111000000111234


Q ss_pred             HhhhhhhhcccccceeeeccCH-HHHHHHhhhhhcCCceec
Q 017635          265 TLVPRIRVVKGSGKAINYLTPP-RILLALVTAWLRRGRWFD  304 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~g~~~~  304 (368)
                      .+++|+..|+|++..+.||+++ .+.++||+.+.+||+|..
T Consensus       217 ~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~~~  257 (276)
T d1bdba_         217 LPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLGV  257 (276)
T ss_dssp             CTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSGGG
T ss_pred             CCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcChhh
Confidence            5688999999999999999984 788999999999999864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=9e-46  Score=333.29  Aligned_cols=213  Identities=27%  Similarity=0.447  Sum_probs=190.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCe-------EEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDR-------VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~-------Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ++||||||++|||+++|++|+++|++       |++++|+.++++++.+++++                 .+.++.+++|
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~-----------------~g~~~~~~~~   64 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA-----------------EGALTDTITA   64 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT-----------------TTCEEEEEEC
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHh-----------------cCCcEEEEEe
Confidence            46899999999999999999999998       99999999999999988875                 4568899999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.++||++|+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ ++|+||++
T Consensus        65 Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~i  142 (240)
T d2bd0a1          65 DISDMADVRRLTTHIVERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFI  142 (240)
T ss_dssp             CTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEE
Confidence            999999999999999999999999999999987 7899999999999999999999999999999999987 68999999


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHh
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTL  266 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~  266 (368)
                      ||. ++..+.|+.+.|++||+|+.+|+++|+.|++++|||||+|+||+|+|+|+.........     ...+||++|+.+
T Consensus       143 sS~-~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~~~-----~~~~PedvA~~v  216 (240)
T d2bd0a1         143 TSV-AATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEMQA-----LMMMPEDIAAPV  216 (240)
T ss_dssp             CCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTTGG-----GSBCHHHHHHHH
T ss_pred             ech-hhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhhHh-----cCCCHHHHHHHH
Confidence            998 67888999999999999999999999999999999999999999999997654322111     123688888777


Q ss_pred             hhhhh
Q 017635          267 VPRIR  271 (368)
Q Consensus       267 ~~~~~  271 (368)
                      +..+.
T Consensus       217 ~~l~s  221 (240)
T d2bd0a1         217 VQAYL  221 (240)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            65554

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=7.6e-48  Score=349.68  Aligned_cols=238  Identities=16%  Similarity=0.156  Sum_probs=207.6

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      |+|||||++|||+++|++|+++|++|++++|+.++++++.....                       .+.++|++|.+++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-----------------------~~~~~dv~~~~~~   58 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-----------------------TYPQLKPMSEQEP   58 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-----------------------HCTTSEECCCCSH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-----------------------cEEEeccCCHHHH
Confidence            79999999999999999999999999999999888766533221                       1246899999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++++.++||+||+||||||+..+..++.+.+.|+|++.+++|+.++++++|+++|+|+++ +.|+||++||. ++..
T Consensus        59 ~~~~~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~IV~isS~-~~~~  136 (252)
T d1zmta1          59 AELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKR-KSGHIIFITSA-TPFG  136 (252)
T ss_dssp             HHHHHHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCS-TTTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhccc-ccceeeccccc-cccc
Confidence            999999999999999999999987546889999999999999999999999999999999988 58999999998 6788


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH----HHHHhhhhh
Q 017635          195 STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET----VARTLVPRI  270 (368)
Q Consensus       195 ~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~----~a~~~~~~~  270 (368)
                      +.+...+|++||+|+++|+|+|+.|++++|||||+|+||+|+|++...........      ..+|.    ....+++|+
T Consensus       137 ~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~------~~~e~~~~~~~~~pl~R~  210 (252)
T d1zmta1         137 PWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK------TNPEHVAHVKKVTALQRL  210 (252)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT------TCHHHHHHHHHHSSSSSC
T ss_pred             ccccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhccccc------CCHHHHHHHHhcCCCCCC
Confidence            88999999999999999999999999999999999999999999875433211111      12222    334567899


Q ss_pred             hhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          271 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..|+|++..+.||+|+...++||+.+..||+|.
T Consensus       211 g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         211 GTQKELGELVAFLASGSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             BCHHHHHHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhCchhcCCcCCeEEECCCce
Confidence            999999999999999999999999999999984

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-46  Score=334.89  Aligned_cols=218  Identities=24%  Similarity=0.310  Sum_probs=195.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++++++.+++++                 .+.++.++.||+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~-----------------~~~~~~~~~~Dv   65 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG-----------------LGAKVHTFVVDC   65 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEeeC
Confidence            578999999999999999999999999999999999999999999999876                 456899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.|++++++.++|+|+++ +.|+||++||
T Consensus        66 s~~~~v~~~~~~i~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS  143 (244)
T d1yb1a_          66 SNREDIYSSAKKVKAEIGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVAS  143 (244)
T ss_dssp             TCHHHHHHHHHHHHHHTCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeec
Confidence            9999999999999999999999999999987 6788899999999999999999999999999999988 6899999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC---CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKR---SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVART  265 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~---~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~  265 (368)
                      . ++..+.|++++|++||+|+.+|+++|+.|+++   +||+||+|+||+|+|+|.+....    .+  ....+||++|+.
T Consensus       144 ~-~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~----~~--~~~~~pe~va~~  216 (244)
T d1yb1a_         144 A-AGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST----SL--GPTLEPEEVVNR  216 (244)
T ss_dssp             C-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH----HH--CCCCCHHHHHHH
T ss_pred             c-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc----cc--cCCCCHHHHHHH
Confidence            8 67888999999999999999999999999875   68999999999999998754321    11  122379999998


Q ss_pred             hhhhhhh
Q 017635          266 LVPRIRV  272 (368)
Q Consensus       266 ~~~~~~~  272 (368)
                      ++..+..
T Consensus       217 i~~~~~~  223 (244)
T d1yb1a_         217 LMHGILT  223 (244)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhc
Confidence            8866543

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.6e-47  Score=345.97  Aligned_cols=250  Identities=22%  Similarity=0.280  Sum_probs=213.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe-CChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS-RSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~-R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +|+||+||||||++|||+++|++|+++|++|++++ |+.+.++++.+++++                 .+.++.+++||+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~D~   65 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK-----------------LGAQGVAIQADI   65 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEECCT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHH-----------------cCCCceEecCCC
Confidence            58999999999999999999999999999999875 556667777777765                 456889999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|+++++++++++.+++|+||+||||||... ..++.+.+.++|++.+++|+.++++++|.++|+|+++   +++++++|
T Consensus        66 ~~~~~v~~~~~~~~~~~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s  141 (259)
T d1ja9a_          66 SKPSEVVALFDKAVSHFGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSS  141 (259)
T ss_dssp             TSHHHHHHHHHHHHHHHSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECC
T ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC---Cccccccc
Confidence            9999999999999999999999999999976 6889999999999999999999999999999999753   56777776


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH-----HH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-----VA  263 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-----~a  263 (368)
                      ..+...+.|.+..|++||+|+++|+|+|+.|++++|||||+|+||+|+|+|..........  .......+++     ..
T Consensus       142 ~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  219 (259)
T d1ja9a_         142 IAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAP--GGYKGMPQEKIDEGLAN  219 (259)
T ss_dssp             GGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTST--TCCTTCCHHHHHHHHHH
T ss_pred             ccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhh--hhcccCCHHHHHHHHHh
Confidence            6555667899999999999999999999999999999999999999999987543221110  0111112233     23


Q ss_pred             HHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          264 RTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       264 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      ..+++|+..|+|+++++.||+++...++||..+..||++
T Consensus       220 ~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         220 MNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             TSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             CCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            456788999999999999999999999999999999986

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=6.8e-47  Score=341.00  Aligned_cols=238  Identities=22%  Similarity=0.292  Sum_probs=205.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..++                    .+.++.+++||++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--------------------~~~~~~~~~~Dls   61 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA--------------------LEAEAIAVVADVS   61 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--------------------CCSSEEEEECCTT
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH--------------------cCCceEEEEecCC
Confidence            58999999999999999999999999999999999999887665544                    2457889999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++++++++++++.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++|+++|+|++   .+.|+++||.
T Consensus        62 ~~~~i~~~~~~i~~~~g~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~---~~~i~~~ss~  137 (241)
T d2a4ka1          62 DPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSV  137 (241)
T ss_dssp             SHHHHHHHHHHHHHHHSCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT---TCEEEEECCC
T ss_pred             CHHHHHHHHHHHHHHhCCccEecccccccc-ccchhhhhcccccccccccccccccccccccccccc---ccceeecccc
Confidence            999999999999999999999999999977 689999999999999999999999999999999864   3567766654


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                        +..+.|++..|+++|+|+++|+++|++|++++|||||+|+||+|+|++........          ..+...+.+++|
T Consensus       138 --a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~----------~~~~~~~~p~~r  205 (241)
T d2a4ka1         138 --AGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWA----------WEQEVGASPLGR  205 (241)
T ss_dssp             --TTCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHH----------HHHHHHTSTTCS
T ss_pred             --ccccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhH----------HHHHHhCCCCCC
Confidence              34555788999999999999999999999999999999999999999875432111          123344677889


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..|+|+++.+.||+++...++||+.+..||+|.
T Consensus       206 ~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         206 AGRPEEVAQAALFLLSEESAYITGQALYVDGGRS  239 (241)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             CcCHHHHHHHHHHHhcchhCCCcCceEEeCCCcc
Confidence            9999999999999999999999999999999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-46  Score=337.93  Aligned_cols=239  Identities=22%  Similarity=0.338  Sum_probs=205.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++++..               ...++.+++||++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~---------------~~~~~~~~~~Dls   71 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG---------------YPGTLIPYRCDLS   71 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------CSSEEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC---------------CCceEEEEEccCC
Confidence            4899999999999999999999999999999999999999999999998742               2358999999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-CCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-KGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~~g~Iv~isS  188 (368)
                      |+++++++++++.+++|+||+||||||... ..++.+.+.++|++.+++|+.++++++++++|.|++++ ++|+||++||
T Consensus        72 ~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS  150 (257)
T d1xg5a_          72 NEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  150 (257)
T ss_dssp             CHHHHHHHHHHHHHHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEec
Confidence            999999999999999999999999999987 68999999999999999999999999999999998764 4789999998


Q ss_pred             CCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHh--CCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          189 AGSGG--SSTPLTAVYGSTKCGLRQLQASLFKES--KRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       189 ~~~~~--~~~~~~~~Y~aSKaal~~l~~~la~e~--~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      . ++.  .+.+....|++||+|+.+|+++|+.|+  +++|||||+|+||+++|++........          ..+..+.
T Consensus       151 ~-~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~----------~~~~~~~  219 (257)
T d1xg5a_         151 M-SGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKD----------PEKAAAT  219 (257)
T ss_dssp             G-GGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTC----------HHHHHHH
T ss_pred             h-HhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhh----------HHHHHhc
Confidence            7 343  345667789999999999999999998  789999999999999999864322111          1233455


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhh
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTA  295 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  295 (368)
                      .++.++..|+|+++++.||+++...++|++.
T Consensus       220 ~~~~r~~~pedvA~~v~fL~s~~a~~itG~i  250 (257)
T d1xg5a_         220 YEQMKCLKPEDVAEAVIYVLSTPAHIQIGDI  250 (257)
T ss_dssp             HC---CBCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             CCCCCCcCHHHHHHHHHHHhCChhcCeECCE
Confidence            6778888999999999999988877777754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-46  Score=339.51  Aligned_cols=242  Identities=25%  Similarity=0.290  Sum_probs=205.3

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..               .+.++.+++||++|
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~---------------~~~~~~~~~~Dv~~   65 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQF---------------EPQKTLFIQCDVAD   65 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTS---------------CGGGEEEEECCTTS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc---------------CCCcEEEEEeecCC
Confidence            379999999999999999999999999999999999999999888876532               24578999999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC--CCcEEEEEcC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP--KGGHIFNMDG  188 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~--~~g~Iv~isS  188 (368)
                      +++++++++++.+++|+||+||||||....         ++|++.+++|+.+++.+++.++|+|.+++  .+|+||++||
T Consensus        66 ~~~v~~~~~~~~~~~G~iDilVnnAg~~~~---------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS  136 (254)
T d2gdza1          66 QQQLRDTFRKVVDHFGRLDILVNNAGVNNE---------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  136 (254)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCS---------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             HHHHHHHHHHHHHHcCCcCeeccccccccc---------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc
Confidence            999999999999999999999999998641         35899999999999999999999998753  3589999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHH--HHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHH-HHHH
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQAS--LFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPET-VART  265 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~--la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~-~a~~  265 (368)
                      . ++..+.|..++|++||+|+.+|+|+  |+.|++++|||||+|+||+|+|+|+.........  .... ...+. ....
T Consensus       137 ~-~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~--~~~~-~~~~~~~~~~  212 (254)
T d2gdza1         137 L-AGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENM--GQYI-EYKDHIKDMI  212 (254)
T ss_dssp             G-GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHH--GGGG-GGHHHHHHHH
T ss_pred             H-hhccCCCCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccc--cccH-HHHHHHHhcC
Confidence            8 6788899999999999999999997  7889999999999999999999997653322111  1111 11222 3446


Q ss_pred             hhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          266 LVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       266 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      +++|+..|+|+++.+.||+++..  ++|+.+.+||++
T Consensus       213 p~~r~~~pedvA~~v~fL~s~~~--itG~~i~VdGG~  247 (254)
T d2gdza1         213 KYYGILDPPLIANGLITLIEDDA--LNGAIMKITTSK  247 (254)
T ss_dssp             HHHCCBCHHHHHHHHHHHHHCTT--CSSCEEEEETTT
T ss_pred             CCCCCcCHHHHHHHHHHHHcCCC--CCCCEEEECCCC
Confidence            67889999999999999998764  788888888876

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.4e-46  Score=340.36  Aligned_cols=251  Identities=21%  Similarity=0.277  Sum_probs=215.0

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..+|+||++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++++                 .+.++.++++
T Consensus        13 ~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~-----------------~g~~~~~~~~   75 (272)
T d1g0oa_          13 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKK-----------------NGSDAACVKA   75 (272)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-----------------TTCCEEEEEC
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHh-----------------hCCceeeEeC
Confidence            467999999999999999999999999999999999887 5566777777765                 4568999999


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |++|+++++++++++.+++|++|++|||+|... ..++.+.+.++|++.+++|+.+++.++|+++|+|++   .|+++++
T Consensus        76 D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i  151 (272)
T d1g0oa_          76 NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILM  151 (272)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeecccccccccc---ccccccc
Confidence            999999999999999999999999999999887 688999999999999999999999999999999975   4688888


Q ss_pred             cCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHH------
Q 017635          187 DGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPE------  260 (368)
Q Consensus       187 sS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe------  260 (368)
                      +|+.+...+.+....|++||+|+++|+++|+.|++++|||||+|+||+|+|++.............   ...++      
T Consensus       152 ~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~---~~~~~~~~~~~  228 (272)
T d1g0oa_         152 GSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGE---NLSNEEVDEYA  228 (272)
T ss_dssp             CCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCT---TCCHHHHHHHH
T ss_pred             cccccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhccc---ccchHHHHHHH
Confidence            877555667788899999999999999999999999999999999999999987543221111100   00122      


Q ss_pred             HHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          261 TVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       261 ~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .....+++|+..|+|++.++.||+++...+++|..+..||++
T Consensus       229 ~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         229 AVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             HHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            223456789999999999999999999999999999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=8.5e-46  Score=332.46  Aligned_cols=229  Identities=17%  Similarity=0.229  Sum_probs=198.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++||++|||||++|||+++|++|+++|++|++++|+++.+++                          ....++.||+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~--------------------------~~~~~~~~Dv~~   55 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------------------------SGHRYVVCDLRK   55 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH--------------------------TCSEEEECCTTT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh--------------------------cCCcEEEcchHH
Confidence            689999999999999999999999999999999999765432                          123457899986


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .      ++.+.+++|+||+||||||... ..++.+.+.++|++.+++|+.++++++|+++|+|+++ +.|+||+++|. 
T Consensus        56 ~------~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~S~-  126 (234)
T d1o5ia_          56 D------LDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAITSF-  126 (234)
T ss_dssp             C------HHHHHHHSCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCG-
T ss_pred             H------HHHHHHHhCCCcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-ccccccccccc-
Confidence            3      4456678899999999999876 6889999999999999999999999999999999987 67999999987 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRI  270 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~  270 (368)
                      ....+.+....|++||+|+.+|+++++.|++++|||||+|+||+++|++.........         ..+...+.+++|+
T Consensus       127 ~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~---------~~~~~~~~pl~R~  197 (234)
T d1o5ia_         127 SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEK---------KKQVESQIPMRRM  197 (234)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHH---------HHHHHTTSTTSSC
T ss_pred             cccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHH---------HHHHHhcCCCCCC
Confidence            5778889999999999999999999999999999999999999999998654221111         0122335678899


Q ss_pred             hhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          271 RVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       271 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ..|+|++..+.||+++...++||+.+..||+|.
T Consensus       198 ~~pediA~~v~fL~S~~s~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         198 AKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS  230 (234)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             cCHHHHHHHHHHHhChhhcCCcCcEEEECcccc
Confidence            999999999999999999999999999999984

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.8e-46  Score=337.28  Aligned_cols=246  Identities=16%  Similarity=0.143  Sum_probs=204.1

Q ss_pred             ccCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           28 HCKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        28 ~~~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      .++|+||++|||||+|  |||+++|++|+++|++|++++|+++..++. +++..                 ...+..+++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~-~~~~~-----------------~~~~~~~~~   64 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEA-EKLAE-----------------ALGGALLFR   64 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHHH-----------------HTTCCEEEE
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHH-HHhhh-----------------ccCcccccc
Confidence            3578999999999986  999999999999999999999987655443 33332                 124567899


Q ss_pred             ccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          106 CDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       106 ~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      +|++|+++++++++++.+++|+||+||||||....   ..++.+.+.++|++.+++|+.+++.++|.++|+|++   +|+
T Consensus        65 ~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~  141 (256)
T d1ulua_          65 ADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGG  141 (256)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEE
T ss_pred             cccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCE
Confidence            99999999999999999999999999999998542   245678899999999999999999999999999864   589


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      ||++||. .+..+.|...+|++||+|+++|+++|+.|++++|||||+|+||+|+|++.......  ++.      ..+..
T Consensus       142 Iv~isS~-~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~--~~~------~~~~~  212 (256)
T d1ulua_         142 IVTLTYY-ASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGF--TKM------YDRVA  212 (256)
T ss_dssp             EEEEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------C--HHH------HHHHH
T ss_pred             EEEEeeh-HhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhh--HHH------HHHHH
Confidence            9999988 67788999999999999999999999999999999999999999999986543211  111      12334


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...+++|+..|+|++..+.||+++...++||+.+..||+|.
T Consensus       213 ~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         213 QTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             hcCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCEe
Confidence            45678999999999999999999999999999999999874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.7e-46  Score=344.03  Aligned_cols=234  Identities=24%  Similarity=0.277  Sum_probs=203.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC---------hHHHHHHHHHHHHHhhhhhhhcCCCCcccccC
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS---------SESVRMTVTELEENLKEGMMAAGGSSKKNLVH   98 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~---------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~   98 (368)
                      +|+++||++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++..                   
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-------------------   62 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-------------------   62 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-------------------
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-------------------
Confidence            688999999999999999999999999999999998764         4456666666544                   


Q ss_pred             ceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC
Q 017635           99 AKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP  178 (368)
Q Consensus        99 ~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~  178 (368)
                       ......+|++|.++++++++.+.+++|+||+||||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|+++ 
T Consensus        63 -~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-  139 (302)
T d1gz6a_          63 -RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-  139 (302)
T ss_dssp             -TTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             -cccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhC-
Confidence             2334678999999999999999999999999999999987 6899999999999999999999999999999999988 


Q ss_pred             CCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCC
Q 017635          179 KGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICEL  258 (368)
Q Consensus       179 ~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  258 (368)
                      +.|+||++||. ++..+.++...|++||+|+.+|+++|+.|++++|||||+|+||++.|++....               
T Consensus       140 ~~G~IV~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---------------  203 (302)
T d1gz6a_         140 NYGRIIMTASA-SGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---------------  203 (302)
T ss_dssp             TCEEEEEECCH-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---------------
T ss_pred             CCcEEEEeCCh-hhcCCCCCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---------------
Confidence            58999999997 57778899999999999999999999999999999999999999988753211               


Q ss_pred             HHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          259 PETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      ++.     +.+...|++++..+.||+++.. +++|+.+..||+|...
T Consensus       204 ~~~-----~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         204 PED-----LVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             CHH-----HHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETTEEEE
T ss_pred             cHh-----hHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCCceeE
Confidence            222     2233578999999999999876 6899999999998653

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.3e-44  Score=335.76  Aligned_cols=253  Identities=21%  Similarity=0.234  Sum_probs=217.8

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI  104 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~  104 (368)
                      +.+..+|+||++|||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                .+.++.++
T Consensus        17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~----------------~g~~~~~~   80 (294)
T d1w6ua_          17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ----------------TGNKVHAI   80 (294)
T ss_dssp             CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------HSSCEEEE
T ss_pred             CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh----------------cCCceEEE
Confidence            34456899999999999999999999999999999999999999999999988765                34678899


Q ss_pred             eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          105 ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       105 ~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +||+++.++++++++.+.++++++|+||||||... ..++.+.+.+++++.+.+|+.+.+.+.+...+.+.....++.++
T Consensus        81 ~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~  159 (294)
T d1w6ua_          81 QCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFL  159 (294)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             EecccChHHHHHHhhhhhhhccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhccccccccccccc
Confidence            99999999999999999999999999999999877 68889999999999999999999999999888887765677788


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      +++|. ++..+.++..+|++||+|+++|+|+++.|++++|||||+|+||+|+|++...........       ..+..+.
T Consensus       160 ~~ss~-~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-------~~~~~~~  231 (294)
T d1w6ua_         160 SITTI-YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-------EKEMIGR  231 (294)
T ss_dssp             EECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-------HHHHHTT
T ss_pred             ccccc-hhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHH-------HHHHhhc
Confidence            88776 566778889999999999999999999999999999999999999999875433211111       1233445


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCce
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRW  302 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~  302 (368)
                      .+++|+..|+|++..+.||+++...+++|+.+..||++
T Consensus       232 ~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         232 IPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence            67889999999999999999999999999999999886

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-45  Score=329.12  Aligned_cols=242  Identities=18%  Similarity=0.250  Sum_probs=203.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|+||++|||||++|||+++|++|+++|++|++++|++++++++.+                      ...+....+|+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~----------------------~~~~~~~~~d~~   60 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK----------------------YPGIQTRVLDVT   60 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG----------------------STTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----------------------ccCCceeeeecc
Confidence            4899999999999999999999999999999999999877654322                      134667888998


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      +.+.++..    .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++|.++|+|.++ +.|+||+++|.
T Consensus        61 ~~~~~~~~----~~~~~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~  134 (245)
T d2ag5a1          61 KKKQIDQF----ANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV  134 (245)
T ss_dssp             CHHHHHHH----HHHCSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS
T ss_pred             cccccccc----ccccccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeech
Confidence            87766554    456689999999999987 6889999999999999999999999999999999987 68999999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                      .+...+.+...+|+++|+|+++|+|+|+.|++++|||||+|+||+|+||+..+........ ..   ...+...+.+++|
T Consensus       135 ~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~-~~---~~~~~~~~~pl~R  210 (245)
T d2ag5a1         135 ASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNP-EE---ARNDFLKRQKTGR  210 (245)
T ss_dssp             BTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSH-HH---HHHHHHHTCTTSS
T ss_pred             hhccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhh-HH---HHHHHHhcCCCCC
Confidence            5545678899999999999999999999999999999999999999999875422110000 00   0123345677889


Q ss_pred             hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          270 IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +..|+|+++.+.||++|...++||+.+.+||+|.
T Consensus       211 ~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         211 FATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             CEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             CcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            9999999999999999999999999999999874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=6e-43  Score=317.34  Aligned_cols=188  Identities=22%  Similarity=0.297  Sum_probs=166.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |+++||+||||||++|||+++|++|+++|++|++++|+.++.++. ++++...               .+.++.++.+|+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~-~~~~~~~---------------~~~~~~~~~~d~   64 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTAL-AELKAIN---------------PKVNITFHTYDV   64 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHH-HHHHHHC---------------TTSEEEEEECCT
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHH-HHHHhhC---------------CCCCEEEEEeec
Confidence            689999999999999999999999999999999999887775544 3443321               346899999999


Q ss_pred             C-CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC--CCCcEEEE
Q 017635          109 C-EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ--PKGGHIFN  185 (368)
Q Consensus       109 ~-~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~--~~~g~Iv~  185 (368)
                      + +.++++++++++.+++|+||+||||||..         +.++|++++++|+.|+++++++++|+|.++  +.+|+||+
T Consensus        65 ~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~---------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~  135 (254)
T d1sbya1          65 TVPVAESKKLLKKIFDQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIAN  135 (254)
T ss_dssp             TSCHHHHHHHHHHHHHHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC---------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEE
Confidence            8 67889999999999999999999999964         346799999999999999999999999765  24689999


Q ss_pred             EcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          186 MDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       186 isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ++|. ++..+.+.+.+|++||+|+.+|+++|+.|++++|||||+|+||+|+|||.+.
T Consensus       136 isS~-~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~  191 (254)
T d1sbya1         136 ICSV-TGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             ECCG-GGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred             Eech-hhccCCCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccc
Confidence            9988 6788899999999999999999999999999999999999999999998754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.9e-42  Score=312.57  Aligned_cols=230  Identities=23%  Similarity=0.191  Sum_probs=191.0

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~---~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.++|....               .+.++.+++|
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~---------------~~~~~~~~~~   67 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQ---------------PDLKVVLAAA   67 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHC---------------TTSEEEEEEC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhc---------------CCceEEEEEc
Confidence            57899999999999999999999986   79999999999999999999997753               3468999999


Q ss_pred             cCCCHHHHHHHHHHHHh----HcCCCCEEEEccCCCC--CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC-C
Q 017635          107 DVCEPADVQKLSNFAVN----EFGSIDIWINNAGTNK--GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP-K  179 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~----~~g~iD~li~nAG~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~  179 (368)
                      |++|+++++++++.+.+    .++.+|++|||||...  +..++.+.+.++|++++++|+.++++++|+++|+|++++ .
T Consensus        68 Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~  147 (259)
T d1oaaa_          68 DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL  147 (259)
T ss_dssp             CTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC
T ss_pred             cCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCC
Confidence            99999999999998876    3467999999999754  245688999999999999999999999999999998763 2


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  259 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  259 (368)
                      .|+||++||. ++..+.|++++|++||+|+++|+++|+.|  ++|||||+|+||+|+|+|........         ..|
T Consensus       148 ~g~Iv~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~---------~~~  215 (259)
T d1oaaa_         148 SKTVVNISSL-CALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETS---------KDP  215 (259)
T ss_dssp             EEEEEEECCG-GGTSCCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHC---------SCH
T ss_pred             cccccccccc-cccCCCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcC---------CCH
Confidence            5899999988 67888999999999999999999999999  57999999999999999864321100         012


Q ss_pred             HHH----HHHhhhhhhhcccccceeeeccCH
Q 017635          260 ETV----ARTLVPRIRVVKGSGKAINYLTPP  286 (368)
Q Consensus       260 e~~----a~~~~~~~~~~~~~~~~~~~l~~~  286 (368)
                      +..    ...+.+++..|+++++.+.||+++
T Consensus       216 ~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~  246 (259)
T d1oaaa_         216 ELRSKLQKLKSDGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCCHHHHHHHHHHHhhh
Confidence            111    223445666677777766666653

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-40  Score=303.43  Aligned_cols=217  Identities=21%  Similarity=0.282  Sum_probs=192.6

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      |+||++||||||+|||+++|++|+++|++|++++|+.++++++.+++...                .+..+..+.+|+++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~----------------~~~~~~~~~~d~~~   75 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL----------------GAASAHYIAGTMED   75 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH----------------TCSEEEEEECCTTC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh----------------hcccchhhhhhhhh
Confidence            89999999999999999999999999999999999999999998887664                45688899999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .+.++...+.+.+.+|.+|+++||||... ..++.+.+.+++++++++|+.|++.+++.++|+|+++  +|+||++||. 
T Consensus        76 ~~~~~~~~~~~~~~~g~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~-  151 (269)
T d1xu9a_          76 MTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSL-  151 (269)
T ss_dssp             HHHHHHHHHHHHHHHTSCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEG-
T ss_pred             HHHHHHHHHHHHHHhCCcccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccc-
Confidence            99999999999999999999999999887 6788899999999999999999999999999999854  6999999998 


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCC--CCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKR--SKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~--~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      ++..+.|+..+|++||+|+++|+++|+.|+++  .||+||+|+||+|+|+|.......    .......+||++|+.++.
T Consensus       152 ~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~----~~~~~~~~~e~~a~~i~~  227 (269)
T d1xu9a_         152 AGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----IVHMQAAPKEECALEIIK  227 (269)
T ss_dssp             GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----GGGGGCBCHHHHHHHHHH
T ss_pred             hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccC----CccccCCCHHHHHHHHHH
Confidence            68899999999999999999999999999874  579999999999999987543221    112223479999998886


Q ss_pred             hhh
Q 017635          269 RIR  271 (368)
Q Consensus       269 ~~~  271 (368)
                      ...
T Consensus       228 ~~~  230 (269)
T d1xu9a_         228 GGA  230 (269)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            554

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-41  Score=309.28  Aligned_cols=191  Identities=19%  Similarity=0.250  Sum_probs=163.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEE---EEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVV---VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vi---l~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .|+||||||++|||+++|++|+++|++|+   ++.|+.+..+++.+..++..              ..+.++.++.||++
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~--------------~~~~~~~~~~~Dv~   67 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA--------------CPPGSLETLQLDVR   67 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT--------------CCTTSEEEEECCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh--------------ccCCceEEEecccc
Confidence            47899999999999999999999998754   45666555444443333211              03568999999999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      |.++++++++++.+  |++|+||||||... ..++.+.+.|+|++++++|+.|+++++++++|+|+++ +.|+||++||.
T Consensus        68 ~~~~~~~~~~~~~~--g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~-~~G~Iv~isS~  143 (285)
T d1jtva_          68 DSKSVAAARERVTE--GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGSV  143 (285)
T ss_dssp             CHHHHHHHHHTCTT--SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEEG
T ss_pred             chHhhhhhhhhccc--cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHc-CCCceEEEech
Confidence            99999999988743  89999999999987 6889999999999999999999999999999999987 58999999998


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                       ++..+.|..+.|++||+|+++|+++|+.|++++|||||+|+||+|+|+|...
T Consensus       144 -~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~  195 (285)
T d1jtva_         144 -GGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK  195 (285)
T ss_dssp             -GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred             -hhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHH
Confidence             6888999999999999999999999999999999999999999999999764

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-40  Score=305.88  Aligned_cols=212  Identities=22%  Similarity=0.269  Sum_probs=181.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLS-GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~-G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|||||++|||+++|++|+++ |++|++++|+.++++++.++|++                 .+.++.+++||++|.
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~-----------------~~~~~~~~~~Dvs~~   65 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA-----------------EGLSPRFHQLDIDDL   65 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH-----------------TTCCCEEEECCTTCH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh-----------------cCCcEEEEEEecCCH
Confidence            356799999999999999999986 89999999999999999999977                 345788999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++++.+++|+||+||||||+.. ..+..+.+.++|++++++|++|++++++.++|+|++   .|+||+++|..+
T Consensus        66 ~sv~~~~~~~~~~~g~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~  141 (275)
T d1wmaa1          66 QSIRALRDFLRKEYGGLDVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMS  141 (275)
T ss_dssp             HHHHHHHHHHHHHHSSEEEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHH
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccce
Confidence            9999999999999999999999999987 577778889999999999999999999999999964   489999998521


Q ss_pred             C----------------------------------------CCCCCCchhhHHHHHHHHHHHHHHHHHhCC----CCeEE
Q 017635          192 G----------------------------------------GSSTPLTAVYGSTKCGLRQLQASLFKESKR----SKVGV  227 (368)
Q Consensus       192 ~----------------------------------------~~~~~~~~~Y~aSKaal~~l~~~la~e~~~----~gI~v  227 (368)
                      .                                        ........+|++||+++.+|++.+++|+++    .||+|
T Consensus       142 ~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~v  221 (275)
T d1wmaa1         142 VRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL  221 (275)
T ss_dssp             HHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEE
T ss_pred             eccccccchhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            0                                        111223457999999999999999998864    59999


Q ss_pred             EEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhhhhhcccc
Q 017635          228 HTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPRIRVVKGS  276 (368)
Q Consensus       228 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~  276 (368)
                      |+|+||+|+|+|.....           ..+||++|+.++.+...+++.
T Consensus       222 n~v~PG~v~T~m~~~~~-----------~~~pee~A~~~~~~a~~~~~~  259 (275)
T d1wmaa1         222 NACCPGWVRTDMAGPKA-----------TKSPEEGAETPVYLALLPPDA  259 (275)
T ss_dssp             EEEECCSBCSTTTCTTC-----------SBCHHHHTHHHHHHHSCCTTC
T ss_pred             EEEecccccCCcccCcc-----------cCCHHHHHHHHHHHHcCChhh
Confidence            99999999999975322           227999999988776555554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.1e-39  Score=293.14  Aligned_cols=192  Identities=20%  Similarity=0.254  Sum_probs=166.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHH---HCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           33 PRNVVITGSTRGLGKALAREFL---LSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la---~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .|+||||||++|||+++|++|+   ++|++|++++|++++++++.+ +.+                 .+.++.+++||++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~-----------------~~~~~~~~~~Dvs   63 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAK-----------------NHSNIHILEIDLR   63 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHH-----------------HCTTEEEEECCTT
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHh-----------------cCCcEEEEEEEec
Confidence            3899999999999999999996   579999999999998876543 333                 2357889999999


Q ss_pred             CHHHHHHHHHHHHh--HcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----------
Q 017635          110 EPADVQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----------  177 (368)
Q Consensus       110 ~~~~v~~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----------  177 (368)
                      |+++++++++++.+  +++++|+||||||+.....++.+.+.++|++++++|+.|++++++.++|+|+++          
T Consensus        64 ~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~  143 (248)
T d1snya_          64 NFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMG  143 (248)
T ss_dssp             CGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSS
T ss_pred             cHHHHHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccc
Confidence            99999999998854  679999999999987645678899999999999999999999999999999853          


Q ss_pred             CCCcEEEEEcCCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCccccc
Q 017635          178 PKGGHIFNMDGAGSGG--SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLS  242 (368)
Q Consensus       178 ~~~g~Iv~isS~~~~~--~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~  242 (368)
                      ...|+||+++|..+..  .+.+++.+|++||+|+.+|+++++.|++++||+||+|+||+|+|+|...
T Consensus       144 ~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~  210 (248)
T d1snya_         144 VGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  210 (248)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             ccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccc
Confidence            2468999999874322  3456778999999999999999999999999999999999999999754

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-40  Score=300.81  Aligned_cols=225  Identities=21%  Similarity=0.242  Sum_probs=186.6

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.                    .......+|+.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--------------------~~~~~~~~~~~   61 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--------------------NNCVFAPADVT   61 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--------------------TTEEEEECCTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--------------------CCccccccccc
Confidence            6899999999999999999999999999999999999999888777663                    35677899999


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-----CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKG-----FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PK  179 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-----~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~  179 (368)
                      +.++++...+.+...++.+|.+++|+++...     ..++.+.+.++|++++++|+.++++++|+++|+|..+     .+
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~  141 (248)
T d2o23a1          62 SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ  141 (248)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC
T ss_pred             ccccccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCC
Confidence            9999999999999999999999999887541     2456678899999999999999999999999998643     25


Q ss_pred             CcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCH
Q 017635          180 GGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELP  259 (368)
Q Consensus       180 ~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p  259 (368)
                      +|+||++||. ++..+.|++++|++||+|+++|+++|+.|++++|||||+|+||+++|++.........          .
T Consensus       142 ~G~Ii~isS~-~~~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~----------~  210 (248)
T d2o23a1         142 RGVIINTASV-AAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVC----------N  210 (248)
T ss_dssp             CEEEEEECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------------C
T ss_pred             ceEEEEecch-hhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHH----------H
Confidence            7899999998 5677889999999999999999999999999999999999999999998754322111          1


Q ss_pred             HHHHHHhh-hhhhhcccccceeeeccC
Q 017635          260 ETVARTLV-PRIRVVKGSGKAINYLTP  285 (368)
Q Consensus       260 e~~a~~~~-~~~~~~~~~~~~~~~l~~  285 (368)
                      +...+.++ +|+..|+|+++++.||++
T Consensus       211 ~~~~~~pl~~R~g~peevA~~v~fL~s  237 (248)
T d2o23a1         211 FLASQVPFPSRLGDPAEYAHLVQAIIE  237 (248)
T ss_dssp             HHHHTCSSSCSCBCHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCCcCHHHHHHHHHHHHh
Confidence            12223333 667778888888888764

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.8e-39  Score=293.97  Aligned_cols=212  Identities=18%  Similarity=0.271  Sum_probs=169.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++|+||||||++|||+++|++|+++|+  +|++++|+.++++++.++                    .+.++.+++||++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~--------------------~~~~~~~~~~Dvs   61 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI--------------------KDSRVHVLPLTVT   61 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC--------------------CCTTEEEEECCTT
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHh--------------------hCCceEEEEEecC
Confidence            569999999999999999999999996  689999999887653221                    3457899999999


Q ss_pred             CHHHHHHHHHHHHhHcCC--CCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCC---------
Q 017635          110 EPADVQKLSNFAVNEFGS--IDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQP---------  178 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~--iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~---------  178 (368)
                      |.++++++++++.+.++.  ||+||||||+..+..++.+.+.++|++.+++|+.|++++++.++|+|++++         
T Consensus        62 ~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~  141 (250)
T d1yo6a1          62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS  141 (250)
T ss_dssp             CHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCC
T ss_pred             CHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCcccc
Confidence            999999999999988764  999999999876567888999999999999999999999999999997541         


Q ss_pred             -CCcEEEEEcCCCCC------CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhh
Q 017635          179 -KGGHIFNMDGAGSG------GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQM  251 (368)
Q Consensus       179 -~~g~Iv~isS~~~~------~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~  251 (368)
                       ..++++++++....      ..+..+..+|++||+|+.+|+++|+.|++++||+||+|+||+|+|+|.....       
T Consensus       142 ~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~-------  214 (250)
T d1yo6a1         142 VSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNA-------  214 (250)
T ss_dssp             TTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------
T ss_pred             ceeccccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCC-------
Confidence             24788988764211      1223345679999999999999999999999999999999999999864321       


Q ss_pred             hhhhcCCHHHHHHHhhhhhhhcc
Q 017635          252 FNIICELPETVARTLVPRIRVVK  274 (368)
Q Consensus       252 ~~~~~~~pe~~a~~~~~~~~~~~  274 (368)
                          ..+||+.++.++..+..++
T Consensus       215 ----~~~~e~~a~~~~~~~~~~~  233 (250)
T d1yo6a1         215 ----ALTVEQSTAELISSFNKLD  233 (250)
T ss_dssp             --------HHHHHHHHHHHTTCC
T ss_pred             ----CCCHHHHHHHHHHHHhcCC
Confidence                1268899988887775443

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=4e-39  Score=296.60  Aligned_cols=256  Identities=15%  Similarity=0.160  Sum_probs=192.5

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC-hHHHHHHHHHHHHHhhhhhhhcCCC-CcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRS-SESVRMTVTELEENLKEGMMAAGGS-SKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~-~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .++|||||++|||+++|++|+++|++|++++|+ .++++++.+++.+..+.....-..+ .........+..+.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            489999999999999999999999999998764 5667777777766533211100000 00111223455677889999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHH--------------HHHHhhchHHHHHHHHHHHHHHc-
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIE--------------QIVSTNLVGSILCTREAMRVMRD-  176 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~--------------~~~~vN~~g~~~l~~~~lp~m~~-  176 (368)
                      ++++++++++.+++|+||+||||||... ..++.+.+.++++              ..+++|+.++++++|.+.+.+.. 
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999999999999999999999999977 5777776666554              47899999999999999887642 


Q ss_pred             ----CCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhh
Q 017635          177 ----QPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMF  252 (368)
Q Consensus       177 ----~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~  252 (368)
                          +...++|++++|. ....+.++..+|++||+|+++|+++|++|++++|||||+|+||++.+....  .    +...
T Consensus       162 ~~~~~~~~~~ii~~~s~-~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~--~----~~~~  234 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDA-MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM--P----PAVW  234 (284)
T ss_dssp             CGGGSCSCEEEEEECCT-TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS--C----HHHH
T ss_pred             HHHhcCCCCcccccccc-cccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC--C----HHHH
Confidence                3356789988877 567788899999999999999999999999999999999999986654221  1    1111


Q ss_pred             hhhcCCHHHHHHHh-hhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          253 NIICELPETVARTL-VPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       253 ~~~~~~pe~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                            .+...+.+ .+|+..|+|++.++.||+++...+++|+.+.+||+|.
T Consensus       235 ------~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         235 ------EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             ------HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred             ------HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChh
Confidence                  11222333 3788899999999999999999999999999999884

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4e-39  Score=292.82  Aligned_cols=245  Identities=14%  Similarity=0.152  Sum_probs=206.1

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|+||++|||||++  |||+++|+.|+++|++|++++|+++..+.. +++...                 ......+.+|
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~~~   63 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ-----------------LGSDIVLQCD   63 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH-----------------TTCCCEEECC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh-----------------cCCcceeecc
Confidence            47899999999998  899999999999999999999996654443 444332                 2456778999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC-----CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP-----LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      +++..++...++++.+.++++|++||||+.... ..     .++...+.+...+++|+.+.+.+.+.+.|.|.+   ++.
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  139 (258)
T d1qsga_          64 VAEDASIDTMFAELGKVWPKFDGFVHSIGFAPG-DQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSA  139 (258)
T ss_dssp             TTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCG-GGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEE
T ss_pred             cchHHHHHHHHHHhhhcccccceEEEeeccccc-ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcE
Confidence            999999999999999999999999999998652 22     235677789999999999999999999998853   567


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHH
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETV  262 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~  262 (368)
                      |+++||. ++..+.|....|++||+|+++|++++++|++++|||||+|+||+|+|++.......  ...      ..+..
T Consensus       140 Ii~iss~-~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~------~~~~~  210 (258)
T d1qsga_         140 LLTLSYL-GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDF--RKM------LAHCE  210 (258)
T ss_dssp             EEEEECG-GGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTH--HHH------HHHHH
T ss_pred             EEEecch-hhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchh--hhH------HHHHH
Confidence            8999887 57778889999999999999999999999999999999999999999986542211  111      13344


Q ss_pred             HHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecC
Q 017635          263 ARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDD  305 (368)
Q Consensus       263 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~  305 (368)
                      .+.+++|+..|+|+++.+.||+++...+++|+.+..||+|.-.
T Consensus       211 ~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         211 AVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             HHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGB
T ss_pred             hCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCHHHh
Confidence            5678899999999999999999999999999999999998543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.1e-38  Score=290.52  Aligned_cols=262  Identities=13%  Similarity=0.101  Sum_probs=199.9

Q ss_pred             CCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++.++++.+.                 +....++++|
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~-----------------~~~~~~~~~d   63 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE-----------------LNSPYVYELD   63 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH-----------------TTCCCEEECC
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh-----------------CCceeEeeec
Confidence            47899999999765  9999999999999999999999954 44556666553                 3456778999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCC---CCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEE
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGF---KPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIF  184 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv  184 (368)
                      +++.++++++++++.+.+|++|++|||+|.....   ..+.+...+.+...+.++..+.+.+.+...+.+   +.++.|+
T Consensus        64 ~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~  140 (274)
T d2pd4a1          64 VSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL---NNGASVL  140 (274)
T ss_dssp             TTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE---EEEEEEE
T ss_pred             ccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc---ccCccee
Confidence            9999999999999999999999999999986532   233334455555555556655555555544432   2334555


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++++. +...+.+....|+++|+|+++|+++++.|++++|||||+|+||+++|++........  ..      .......
T Consensus       141 ~~s~~-~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~--~~------~~~~~~~  211 (274)
T d2pd4a1         141 TLSYL-GSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFR--MI------LKWNEIN  211 (274)
T ss_dssp             EEECG-GGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHH--HH------HHHHHHH
T ss_pred             eeccc-ccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchH--HH------HHHHhhh
Confidence            55554 566778888999999999999999999999999999999999999999865432211  11      1233456


Q ss_pred             HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceecCCCcccc--chhhhhhhhh
Q 017635          265 TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFDDQGRALY--AAEADRIRNW  321 (368)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~l~~w  321 (368)
                      .+++|+..|+|++..+.||+|+...+++|+.+.+||+|.........  +..+.++|.-
T Consensus       212 ~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG~~~~g~~~~~~~~~~~~~~~~~  270 (274)
T d2pd4a1         212 APLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHVMGMGAVEEKDNKATLLWDL  270 (274)
T ss_dssp             STTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGBSSCCCTTCTTTTCCHHHH
T ss_pred             hhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCChhhccCCcccccccchhhhhhh
Confidence            67889999999999999999999999999999999999665444433  2234555543

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.4e-38  Score=299.37  Aligned_cols=264  Identities=12%  Similarity=0.096  Sum_probs=197.2

Q ss_pred             CCCeEEEEc--CCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE-----
Q 017635           32 GPRNVVITG--STRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-----  104 (368)
Q Consensus        32 ~~k~vlITG--as~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~-----  104 (368)
                      ++|++||||  +++|||+++|++|+++|++|++++++............+...........     .........     
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~   75 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD-----KKMNILDMLPFDAS   75 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTT-----EECCEEEEEECCTT
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHH-----hhhhhhhcccccce
Confidence            479999999  56899999999999999999999998776554443332221111000000     000112222     


Q ss_pred             ---------------eccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHHHH
Q 017635          105 ---------------ACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILCTR  168 (368)
Q Consensus       105 ---------------~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~  168 (368)
                                     .+|+++.++++++++++.++||+||+||||||...+ .+++.+.+.++|++.+++|+++++.++|
T Consensus        76 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k  155 (329)
T d1uh5a_          76 FDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             CSSGGGCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ehhhcccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence                           346778888999999999999999999999997653 2578899999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEEcCCCCCCCCCCC-chhhHHHHHHHHHHHHHHHHHhCC-CCeEEEEEecCcccCcccccCcc-
Q 017635          169 EAMRVMRDQPKGGHIFNMDGAGSGGSSTPL-TAVYGSTKCGLRQLQASLFKESKR-SKVGVHTASPGMVLTDLLLSGST-  245 (368)
Q Consensus       169 ~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~-~~~Y~aSKaal~~l~~~la~e~~~-~gI~v~~v~PG~v~T~~~~~~~~-  245 (368)
                      +++|+|++   +|+||++||. ++..+.|. ...|++||+|+++|+|+|+.|+++ +|||||+|+||+|+|+....... 
T Consensus       156 ~~~~~m~~---~GsIv~iss~-~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~  231 (329)
T d1uh5a_         156 YFVNIMKP---QSSIISLTYH-ASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKL  231 (329)
T ss_dssp             HHGGGEEE---EEEEEEEECG-GGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--
T ss_pred             HHHhhccc---ccccccceee-hhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccch
Confidence            99999964   5899999987 56666676 568999999999999999999986 69999999999999954322100 


Q ss_pred             -----------------------------cchhhhhhhhcC-----CHHHHHHHhhhhhhhcccccceeeeccCHHHHHH
Q 017635          246 -----------------------------IQNKQMFNIICE-----LPETVARTLVPRIRVVKGSGKAINYLTPPRILLA  291 (368)
Q Consensus       246 -----------------------------~~~~~~~~~~~~-----~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~  291 (368)
                                                   ............     ........+++|+.+|+|++..+.||+|+...++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~i  311 (329)
T d1uh5a_         232 NNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAI  311 (329)
T ss_dssp             ----------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             hhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCc
Confidence                                         000000000000     1222334578899999999999999999999999


Q ss_pred             HhhhhhcCCceec
Q 017635          292 LVTAWLRRGRWFD  304 (368)
Q Consensus       292 ~~~~~~~~g~~~~  304 (368)
                      ||+.+.+||++..
T Consensus       312 TGq~i~VDGG~~~  324 (329)
T d1uh5a_         312 TGQTIYVDNGLNI  324 (329)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCeEEECCCccc
Confidence            9999999998743

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.2e-38  Score=293.57  Aligned_cols=263  Identities=15%  Similarity=0.130  Sum_probs=197.7

Q ss_pred             ccCCCCCeEEEEcCCC--hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEe
Q 017635           28 HCKAGPRNVVITGSTR--GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIA  105 (368)
Q Consensus        28 ~~~~~~k~vlITGas~--GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~  105 (368)
                      +|+|+||++|||||++  |||+++|++|+++|++|++++|+...........+......   ............++..+.
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   79 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS---RVLPDGSLMEIKKVYPLD   79 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG---GBCTTSSBCCEEEEEEEC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhh---hhhhhhhhhhhhhhhhhh
Confidence            5789999999999875  99999999999999999999998654433322221111000   000000000001222222


Q ss_pred             cc------------------CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCC-CCCCCCCCHHHHHHHHHhhchHHHHH
Q 017635          106 CD------------------VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKG-FKPLLQFTNEEIEQIVSTNLVGSILC  166 (368)
Q Consensus       106 ~D------------------v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l  166 (368)
                      .+                  .++..+++++++++.++||+||+||||||.... ..++.+.+.++|++.+++|+.+++.+
T Consensus        80 ~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~  159 (297)
T d1d7oa_          80 AVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSL  159 (297)
T ss_dssp             TTCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHH
T ss_pred             hhccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhh
Confidence            21                  345567789999999999999999999998542 36788999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC-CCCeEEEEEecCcccCcccccCcc
Q 017635          167 TREAMRVMRDQPKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESK-RSKVGVHTASPGMVLTDLLLSGST  245 (368)
Q Consensus       167 ~~~~lp~m~~~~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~~gI~v~~v~PG~v~T~~~~~~~~  245 (368)
                      +++++|.|.++   ++++++++........+....|+++|+++.++++.++.|++ ++|||||+|+||+|+|++......
T Consensus       160 ~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~  236 (297)
T d1d7oa_         160 LSHFLPIMNPG---GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF  236 (297)
T ss_dssp             HHHHGGGEEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH
T ss_pred             hhHHHHHhhcC---CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccC
Confidence            99999988754   56666666544445567778999999999999999999996 589999999999999998754321


Q ss_pred             cchhhhhhhhcCCHHHHHHHhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          246 IQNKQMFNIICELPETVARTLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       246 ~~~~~~~~~~~~~pe~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                        .++.      ......+.+++|+..|+|++..+.||+++...++||+.+..||++..
T Consensus       237 --~~~~------~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         237 --IDTM------IEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             --HHHH------HHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             --CHHH------HHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence              1111      12233456788999999999999999999999999999999999854

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.4e-36  Score=272.47  Aligned_cols=203  Identities=14%  Similarity=0.095  Sum_probs=166.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +||+||||||++|||+++|++|+++|++|+++++++.+.                           ......+.+|..+.
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------------------------~~~~~~~~~~~~~~   53 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------------------------ASASVIVKMTDSFT   53 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------------------------SSEEEECCCCSCHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------------------ccccceeecccCcH
Confidence            589999999999999999999999999999999876431                           13455678899999


Q ss_pred             HHHHHHHHHHHhHc--CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          112 ADVQKLSNFAVNEF--GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       112 ~~v~~~~~~i~~~~--g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                      ++++.+.+.+.+.+  +++|+||||||......++.+.+.++|++.+++|+.+++++++.++|+|++   +|+||++||.
T Consensus        54 ~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~  130 (236)
T d1dhra_          54 EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAK  130 (236)
T ss_dssp             HHHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG
T ss_pred             HHHHHHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccH
Confidence            99988888887765  469999999997553456677788999999999999999999999999964   5899999987


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhh
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLV  267 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~  267 (368)
                       ++..+.++..+|++||+|+++|+++|+.|++  ++|||||+|+||+|+|||.+...+...  ...+  .+||++|+.+.
T Consensus       131 -~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~~~--~~pe~va~~~~  205 (236)
T d1dhra_         131 -AALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEAD--FSSW--TPLEFLVETFH  205 (236)
T ss_dssp             -GGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTSC--GGGS--EEHHHHHHHHH
T ss_pred             -HHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccch--hhcC--CCHHHHHHHHH
Confidence             6788899999999999999999999999998  579999999999999998654322111  1111  14677776655


Q ss_pred             hh
Q 017635          268 PR  269 (368)
Q Consensus       268 ~~  269 (368)
                      ..
T Consensus       206 ~l  207 (236)
T d1dhra_         206 DW  207 (236)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.1e-36  Score=277.94  Aligned_cols=250  Identities=13%  Similarity=0.123  Sum_probs=194.7

Q ss_pred             CCCCCeEEEEcC--CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGS--TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGa--s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+.+++.+...   +.                .+.+...++||
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~---~~----------------~~~~~~~~~~d   63 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT---DR----------------LPAKAPLLELD   63 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH---TT----------------SSSCCCEEECC
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH---HH----------------cCCceeeEeee
Confidence            478999999994  5799999999999999999999999877543222   21                34567789999


Q ss_pred             CCCHHHHHHHHHHHHhHc---CCCCEEEEccCCCC----CCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 017635          108 VCEPADVQKLSNFAVNEF---GSIDIWINNAGTNK----GFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  180 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~---g~iD~li~nAG~~~----~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  180 (368)
                      +++.++++++++.+.+.+   +++|++|||||...    ...++.+.+.+++.+.+++|+.+.+...+...+.+.   +.
T Consensus        64 v~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  140 (268)
T d2h7ma1          64 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PG  140 (268)
T ss_dssp             TTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EE
T ss_pred             cccccccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cc
Confidence            999999999999987764   67999999999753    134567889999999999999999999998877653   23


Q ss_pred             cEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccch-hhhhhhhcCCH
Q 017635          181 GHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQN-KQMFNIICELP  259 (368)
Q Consensus       181 g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~p  259 (368)
                      +.|+ ++|. ....+.|.+..|+++|+|+.+|+++++.|++++|||||+|+||+|+|++......... ...........
T Consensus       141 ~~i~-~~s~-~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  218 (268)
T d2h7ma1         141 GSIV-GMDF-DPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLE  218 (268)
T ss_dssp             EEEE-EEEC-CCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred             cccc-cccc-cccccCcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHH
Confidence            3444 4444 4667788899999999999999999999999999999999999999998643221111 11011000011


Q ss_pred             HH-HHHHhhhh-hhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          260 ET-VARTLVPR-IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       260 e~-~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      +. ..+.++.+ +..|+|+++.+.||+++...++||+.+.+||++.
T Consensus       219 ~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         219 EGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             HHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence            22 23344544 8899999999999999999999999999999873

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=4.7e-36  Score=273.27  Aligned_cols=241  Identities=21%  Similarity=0.239  Sum_probs=190.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH-HHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC---
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES-VRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC---  109 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~---  109 (368)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++.+.                .+.+.....+|+.   
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~   65 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA----------------RAGSAVLCKGDLSLSS   65 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH----------------STTCEEEEECCCSSST
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh----------------cCCceEEEecccccch
Confidence            489999999999999999999999999999998655 56667777664                2345666665554   


Q ss_pred             -CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCC-----------CCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC
Q 017635          110 -EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLL-----------QFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ  177 (368)
Q Consensus       110 -~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~-----------~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~  177 (368)
                       +.+.++++++.+.+++|+||+||||||+..+ .++.           +...+.+...+..|+.+++...+...+.+...
T Consensus        66 ~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (266)
T d1mxha_          66 SLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP-TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG  144 (266)
T ss_dssp             THHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---
T ss_pred             hHHHHHHHHHHHHHHHhCCCCEEEECCccCCC-Ccccccccccchhcccccccccccccccccccccchhhhhccccccc
Confidence             4677888899999999999999999998752 3322           23355678889999999999999888877543


Q ss_pred             ----CCCcEEEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhh
Q 017635          178 ----PKGGHIFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFN  253 (368)
Q Consensus       178 ----~~~g~Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~  253 (368)
                          ...+.++++++. .+..+.|++..|++||+|+++|+++++.|++++|||||+|+||+++|++....      ... 
T Consensus       145 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~------~~~-  216 (266)
T d1mxha_         145 GAWRSRNLSVVNLCDA-MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQ------ETQ-  216 (266)
T ss_dssp             ----CCCEEEEEECCG-GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCH------HHH-
T ss_pred             cccccccccchhhhhc-cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCH------HHH-
Confidence                235677788776 67788899999999999999999999999999999999999999999865321      110 


Q ss_pred             hhcCCHHHHHHHhhhh-hhhcccccceeeeccCHHHHHHHhhhhhcCCceec
Q 017635          254 IICELPETVARTLVPR-IRVVKGSGKAINYLTPPRILLALVTAWLRRGRWFD  304 (368)
Q Consensus       254 ~~~~~pe~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~  304 (368)
                           .+...+.++++ ..+|+|++.++.||+++...+++|+.+..||+|.-
T Consensus       217 -----~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         217 -----EEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             -----HHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             -----HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence                 12223344544 46899999999999999999999999999998853

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.1e-37  Score=275.15  Aligned_cols=228  Identities=22%  Similarity=0.218  Sum_probs=186.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|++|||||++|||+++|++|+++|++|++++|+++.                             .+...+++|+++..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-----------------------------~~~~~~~~d~~~~~   51 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-----------------------------EDLIYVEGDVTREE   51 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-----------------------------SSSEEEECCTTCHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-----------------------------ccceEeeccccchh
Confidence            5999999999999999999999999999999998642                             34567899999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCC---CCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-----CCCcEEE
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKG---FKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-----PKGGHIF  184 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-----~~~g~Iv  184 (368)
                      .+..+.+...+.. ..|.++++++....   .......+.+.+++.+++|+.+++.+++.+.+.+.+.     ++.|+||
T Consensus        52 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii  130 (241)
T d1uaya_          52 DVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIV  130 (241)
T ss_dssp             HHHHHHHHHHHHS-CEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEE
T ss_pred             hhHHHHHhhhccc-cccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeee
Confidence            9999988877665 45666666665431   2345567889999999999999999999999995432     2579999


Q ss_pred             EEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHH
Q 017635          185 NMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVAR  264 (368)
Q Consensus       185 ~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~  264 (368)
                      ++||. ++..+.++..+|++||+|+++|+++|+.|++++|||||+|+||+|+|++.........+          +...+
T Consensus       131 ~isS~-~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~----------~~~~~  199 (241)
T d1uaya_         131 NTASV-AAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKA----------SLAAQ  199 (241)
T ss_dssp             EECCT-HHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHH----------HHHTT
T ss_pred             eecch-hhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHH----------HHHhc
Confidence            99997 57788899999999999999999999999999999999999999999987653322111          11222


Q ss_pred             Hhh-hhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          265 TLV-PRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       265 ~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      .++ +|+.+|+|++..+.||++.  .++||+.+..||+|.
T Consensus       200 ~~~~~R~g~pedvA~~v~fL~s~--~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         200 VPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGALR  237 (241)
T ss_dssp             CCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTCC
T ss_pred             CCCCCCCcCHHHHHHHHHHHHhC--CCCCCCEEEECCccc
Confidence            333 6788899999999999974  478999999999873

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-35  Score=264.35  Aligned_cols=202  Identities=16%  Similarity=0.122  Sum_probs=164.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++||||||++|||+++|++|+++|++|++++|++++.                           ......+.+|+.+.++
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~   55 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ---------------------------ADSNILVDGNKNWTEQ   55 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT---------------------------SSEEEECCTTSCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc---------------------------ccccceeccccCchhH
Confidence            4679999999999999999999999999999986531                           1234556788888888


Q ss_pred             HHHHHHHHHh--HcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          114 VQKLSNFAVN--EFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       114 v~~~~~~i~~--~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      .....+.+.+  ++|+||+||||||......+..+.+.++|+.++++|+.++++++|+++|+|++   +|+||++||. +
T Consensus        56 ~~~~~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~-~  131 (235)
T d1ooea_          56 EQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAA-A  131 (235)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCG-G
T ss_pred             HHHHHHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccH-H
Confidence            8877777666  45899999999998653455666677889999999999999999999999964   5899999987 6


Q ss_pred             CCCCCCCchhhHHHHHHHHHHHHHHHHHhC--CCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhhh
Q 017635          192 GGSSTPLTAVYGSTKCGLRQLQASLFKESK--RSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVPR  269 (368)
Q Consensus       192 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~--~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~~  269 (368)
                      +..+.|++.+|++||+|+++|+++|+.|++  +.+|+||+|+||+++|++.+........  ..  ..+|+++++.++..
T Consensus       132 ~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~~~--~~--~~~~~~va~~~~~~  207 (235)
T d1ooea_         132 AMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNADH--SS--WTPLSFISEHLLKW  207 (235)
T ss_dssp             GGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTCCG--GG--CBCHHHHHHHHHHH
T ss_pred             hcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCCcc--cc--CCCHHHHHHHHHHH
Confidence            778899999999999999999999999998  5789999999999999987543221111  11  12688888776543


Q ss_pred             h
Q 017635          270 I  270 (368)
Q Consensus       270 ~  270 (368)
                      +
T Consensus       208 l  208 (235)
T d1ooea_         208 T  208 (235)
T ss_dssp             H
T ss_pred             h
Confidence            3

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.2e-33  Score=255.93  Aligned_cols=219  Identities=16%  Similarity=0.174  Sum_probs=164.8

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .|+||||||++|||+++|++|+++|++|++++|+.++                                  ..+|+.+.+
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------------------------~~~d~~~~~   46 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------------------------VIADLSTAE   46 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------------------------EECCTTSHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------------------------HHHHhcCHH
Confidence            3899999999999999999999999999999997532                                  356999999


Q ss_pred             HHHHHHHHHHhHc-CCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          113 DVQKLSNFAVNEF-GSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       113 ~v~~~~~~i~~~~-g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ..+....++..+. +.+|++|||||+...        .+.+.....+|..+...+.+..+|.+.+. ....+.++++...
T Consensus        47 ~~~~~~~~~~~~~~~~id~lv~~Ag~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  117 (257)
T d1fjha_          47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQ--------TKVLGNVVSVNYFGATELMDAFLPALKKG-HQPAAVVISSVAS  117 (257)
T ss_dssp             HHHHHHHHHHTTCTTCCSEEEECCCCCTT--------CSSHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGG
T ss_pred             HHHHHHHHHHHHhCCCCcEEEEcCCCCCc--------HHHHHHHHHHHHHHHHHHHHHhhhhhhhh-ccCcceeeeeccc
Confidence            8888766665544 679999999997541        23467889999999999999999998876 3455555544311


Q ss_pred             CC---------------------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCc
Q 017635          192 GG---------------------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS  244 (368)
Q Consensus       192 ~~---------------------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~  244 (368)
                      ..                           ...++..+|++||+|+++|+|+|+.|++++|||||+|+||+|+|++.....
T Consensus       118 ~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~  197 (257)
T d1fjha_         118 AHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL  197 (257)
T ss_dssp             GSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred             cchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence            11                           112334579999999999999999999999999999999999999875432


Q ss_pred             ccchhhhhhhhcCCHHHHHH--HhhhhhhhcccccceeeeccCHHHHHHHhhhhhcCCcee
Q 017635          245 TIQNKQMFNIICELPETVAR--TLVPRIRVVKGSGKAINYLTPPRILLALVTAWLRRGRWF  303 (368)
Q Consensus       245 ~~~~~~~~~~~~~~pe~~a~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~  303 (368)
                      ...  .       ..+..++  .+++|+..|+|+++.+.||+|+...++||+.+..||+|.
T Consensus       198 ~~~--~-------~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         198 QDP--R-------YGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             --------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             CCH--H-------HHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            211  1       1222233  468899999999999999999999999999999999984

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=2.2e-31  Score=241.62  Aligned_cols=212  Identities=20%  Similarity=0.217  Sum_probs=164.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChH---HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSE---SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++++|||||++|||+++|++|+++|+ +|++++|+..   ..++..+++++                 .+.++.++.||+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~-----------------~g~~v~~~~~Dv   71 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEA-----------------LGARTTVAACDV   71 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHH-----------------TTCEEEEEECCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHh-----------------cccccccccccc
Confidence            46999999999999999999999998 6899999753   45555666654                 457899999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.++++++++.+.+. +++|.+|||+|... ..++.+.+.+++++.+++|+.+++++.+.+    ... +.++||++||
T Consensus        72 ~d~~~~~~~~~~i~~~-~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~-~~~~iv~~SS  144 (259)
T d2fr1a1          72 TDRESVRELLGGIGDD-VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELT----REL-DLTAFVLFSS  144 (259)
T ss_dssp             TCHHHHHHHHHTSCTT-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTS-CCSEEEEEEE
T ss_pred             chHHHHHHhhcccccc-cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHh----hcc-CCceEeeecc
Confidence            9999999999987554 68999999999987 688999999999999999999999887653    333 5789999999


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      . ++..+.++++.|+++|+++++|++.++.    .|++|++|+||.+.++.+.................+|+++++.+..
T Consensus       145 ~-a~~~g~~~~~~YaAaka~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~  219 (259)
T d2fr1a1         145 F-ASAFGAPGLGGYAPGNAYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQN  219 (259)
T ss_dssp             H-HHHTCCTTCTTTHHHHHHHHHHHHHHHH----TTCCCEEEEECCBC------------CTTTTEECBCHHHHHHHHHH
T ss_pred             h-hhccCCcccHHHHHHHHhHHHHHHHHHh----CCCCEEECCCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHH
Confidence            8 6778889999999999999988776654    5899999999998765443221111111112233478999888766


Q ss_pred             hhhhc
Q 017635          269 RIRVV  273 (368)
Q Consensus       269 ~~~~~  273 (368)
                      .+...
T Consensus       220 ~l~~~  224 (259)
T d2fr1a1         220 ALDRA  224 (259)
T ss_dssp             HHHTT
T ss_pred             HHhCC
Confidence            66543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=2.9e-21  Score=166.40  Aligned_cols=155  Identities=12%  Similarity=0.067  Sum_probs=115.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++.+.                  .++....+|
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~d   79 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR------------------FKVNVTAAE   79 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH------------------HTCCCEEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc------------------cchhhhhhh
Confidence            46899999999999999999999999999999999999999999998888764                  234567899


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.+++++++       +++|+||||||...     ...+.|+|+..+++|+++.++....+.+.+......++  .++
T Consensus        80 ~~~~~~~~~~~-------~~iDilin~Ag~g~-----~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~--~~~  145 (191)
T d1luaa1          80 TADDASRAEAV-------KGAHFVFTAGAIGL-----ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGK--EYG  145 (191)
T ss_dssp             CCSHHHHHHHT-------TTCSEEEECCCTTC-----CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEE--EET
T ss_pred             cccHHHHHHHh-------cCcCeeeecCcccc-----ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcE--Eec
Confidence            99999887664       57999999999743     35689999999999998888765544333322211222  222


Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHH
Q 017635          188 GAGSGGSSTPLTAVYGSTKCGLRQLQA  214 (368)
Q Consensus       188 S~~~~~~~~~~~~~Y~aSKaal~~l~~  214 (368)
                      +.........+...|+++|+++..+++
T Consensus       146 ~~~~~g~~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         146 GKRAFGALGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             TEEEECHHHHHHHHHHHHHHHHHHHTS
T ss_pred             ceEEEeccCcCcHHHHHHHHHHHHHHh
Confidence            210111111233569999999988764

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=2.5e-17  Score=154.86  Aligned_cols=179  Identities=13%  Similarity=0.029  Sum_probs=127.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH-HHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR-MTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|+||||||+|.||.+++++|+++|++|++++|...... ...+.+.....             ....++.++++|++|.
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~Dl~d~   67 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-------------TCNPKFHLHYGDLSDT   67 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhh-------------hcCCCeEEEEeecCCH
Confidence            389999999999999999999999999999999543211 11111111100             0335789999999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      ++++++++.+     .+|+++|+|+....     ..+.++.+..+++|+.|+.++++++...-.  .+..++|++||...
T Consensus        68 ~~~~~~~~~~-----~~d~v~h~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nllea~~~~~~--~~~~r~i~~SS~~v  135 (357)
T d1db3a_          68 SNLTRILREV-----QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGL--EKKTRFYQASTSEL  135 (357)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTC--TTTCEEEEEEEGGG
T ss_pred             HHHHHHHhcc-----CCCEEEEeeccccc-----chhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CCCcEEEEEEchhh
Confidence            9999998875     79999999998652     122344567899999999999888754321  13457999987532


Q ss_pred             CCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          192 GGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       192 ~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ...          +..+...|+.||.+.+.+++.+++.+   |+.+..+.|+.|-.|.
T Consensus       136 YG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         136 YGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR  190 (357)
T ss_dssp             GTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             hCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence            111          11234689999999999999988876   6889999998877664

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-15  Score=131.67  Aligned_cols=193  Identities=15%  Similarity=0.077  Sum_probs=124.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ..|+|+||||+|+||.+++++|+++|++|.++.|+.+++...                       ....+.++.+|++|.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-----------------------~~~~~~~~~gD~~d~   58 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-----------------------GPRPAHVVVGDVLQA   58 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-----------------------SCCCSEEEESCTTSH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-----------------------cccccccccccccch
Confidence            458899999999999999999999999999999998764211                       224578899999999


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      +++.++++       ..|++|+++|...+..   ..         +++..+..++    ++.+++. +-.++|++||.+.
T Consensus        59 ~~l~~al~-------~~d~vi~~~g~~~~~~---~~---------~~~~~~~~~l----~~aa~~~-~v~r~i~~ss~~~  114 (205)
T d1hdoa_          59 ADVDKTVA-------GQDAVIVLLGTRNDLS---PT---------TVMSEGARNI----VAAMKAH-GVDKVVACTSAFL  114 (205)
T ss_dssp             HHHHHHHT-------TCSEEEECCCCTTCCS---CC---------CHHHHHHHHH----HHHHHHH-TCCEEEEECCGGG
T ss_pred             hhHHHHhc-------CCCEEEEEeccCCchh---hh---------hhhHHHHHHH----HHHHHhc-CCCeEEEEeeeec
Confidence            99877754       5899999999754211   11         1223344444    4445544 4678999988643


Q ss_pred             CCCC---CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccchhhhhhhhcCCHHHHHHHhhh
Q 017635          192 GGSS---TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQNKQMFNIICELPETVARTLVP  268 (368)
Q Consensus       192 ~~~~---~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~  268 (368)
                      ...+   .+....|...|...+.+.+       ..|++...|+||.+........................+++|+.++.
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~e~~l~-------~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~  187 (205)
T d1hdoa_         115 LWDPTKVPPRLQAVTDDHIRMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLR  187 (205)
T ss_dssp             TSCTTCSCGGGHHHHHHHHHHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHH
T ss_pred             cCCCccccccccccchHHHHHHHHHH-------hcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHH
Confidence            2221   1222356666666554432       35899999999988543221111111111111112357889999988


Q ss_pred             hhhhcccccc
Q 017635          269 RIRVVKGSGK  278 (368)
Q Consensus       269 ~~~~~~~~~~  278 (368)
                      .+..++-.++
T Consensus       188 ~l~~~~~~g~  197 (205)
T d1hdoa_         188 CLTTDEYDGH  197 (205)
T ss_dssp             TTSCSTTTTC
T ss_pred             HhCCCCCCCE
Confidence            8876654444

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=1.7e-15  Score=143.82  Aligned_cols=176  Identities=13%  Similarity=0.104  Sum_probs=128.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH----------------HHHHHHHHHHHHhhhhhhhcCCCCcccc
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE----------------SVRMTVTELEENLKEGMMAAGGSSKKNL   96 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~----------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~   96 (368)
                      |++||||||+|.||.+++++|+++|++|++++.-..                ...+........                
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------   64 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL----------------   64 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH----------------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh----------------
Confidence            689999999999999999999999999999862111                111111111111                


Q ss_pred             cCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHc
Q 017635           97 VHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRD  176 (368)
Q Consensus        97 ~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~  176 (368)
                      .+.++.++.+|++|.+.++++++..     ++|+|||.|+...  .+....+.+.....+++|+.|+.++++.+...   
T Consensus        65 ~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---  134 (393)
T d1i24a_          65 TGKSIELYVGDICDFEFLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---  134 (393)
T ss_dssp             HCCCCEEEESCTTSHHHHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             cCCCcEEEEccCCCHHHHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHh---
Confidence            2357899999999999999998865     7999999998753  23334566778889999999999998877543   


Q ss_pred             CCCCcEEEEEcCCCCCCC-----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecC
Q 017635          177 QPKGGHIFNMDGAGSGGS-----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPG  233 (368)
Q Consensus       177 ~~~~g~Iv~isS~~~~~~-----------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG  233 (368)
                       +...++++.||......                       +..+...|+.||.+.+.+++.++++.   ++++..+.|+
T Consensus       135 -~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~  210 (393)
T d1i24a_         135 -GEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQG  210 (393)
T ss_dssp             -CTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEEC
T ss_pred             -ccccceeeccccccccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccc
Confidence             23446666666422111                       11223479999999999999888776   6899999998


Q ss_pred             cccCc
Q 017635          234 MVLTD  238 (368)
Q Consensus       234 ~v~T~  238 (368)
                      .+--+
T Consensus       211 ~v~G~  215 (393)
T d1i24a_         211 VVYGV  215 (393)
T ss_dssp             EEECS
T ss_pred             cccCC
Confidence            77654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=1.3e-15  Score=142.16  Aligned_cols=171  Identities=19%  Similarity=0.193  Sum_probs=123.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+||||||+|.||.+++++|+++|++|+++++...............                ...++.++.+|++|.++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~----------------~~~~v~~~~~Dl~d~~~   65 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL----------------TKHHIPFYEVDLCDRKG   65 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH----------------HTSCCCEEECCTTCHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh----------------cccCCeEEEeecCCHHH
Confidence            78999999999999999999999999999876322111111111111                23468889999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      ++++++..     ++|++||+|+....     ....+.......+|+.|+.++.+++...     +-.++|++||.....
T Consensus        66 l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~~~~~~~~N~~~t~~ll~~~~~~-----~i~~~i~~SS~~vyg  130 (347)
T d1z45a2          66 LEKVFKEY-----KIDSVIHFAGLKAV-----GESTQIPLRYYHNNILGTVVLLELMQQY-----NVSKFVFSSSATVYG  130 (347)
T ss_dssp             HHHHHHHS-----CCCEEEECCSCCCH-----HHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGC
T ss_pred             HHHHHhcc-----CCCEEEEccccccc-----cccccCcccccccchhhhHHHHHHHHhc-----ccceEEeecceeeec
Confidence            99887643     69999999997531     1123345678889999999998887543     345799998853221


Q ss_pred             --------------CCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCccc
Q 017635          194 --------------SSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVL  236 (368)
Q Consensus       194 --------------~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~  236 (368)
                                    .+..+...|+.||.+.+.+++.+.+.. ..++++..++|+.+-
T Consensus       131 ~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~  186 (347)
T d1z45a2         131 DATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPI  186 (347)
T ss_dssp             CGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEE
T ss_pred             CcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceE
Confidence                          111234579999999999998887654 346788888876554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.65  E-value=1.9e-15  Score=140.85  Aligned_cols=176  Identities=13%  Similarity=0.141  Sum_probs=127.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .-.+||+||||||+|.||..++++|+++|++|+.+.|+.++............               .......+..|+
T Consensus         7 ~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~---------------~~~~~~~~~~Dl   71 (342)
T d1y1pa1           7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY---------------PGRFETAVVEDM   71 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS---------------TTTEEEEECSCT
T ss_pred             CCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccc---------------cccccEEEeccc
Confidence            34569999999999999999999999999999999999877655443222211               223455678899


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+++..++.       .+|+++|+|+...     ...+   ....+.+|+.|+.++++.+..    .++..++|++||
T Consensus        72 ~~~~~~~~~~~-------~~~~v~~~a~~~~-----~~~~---~~~~~~~nv~gt~~ll~~~~~----~~~v~~~i~~SS  132 (342)
T d1y1pa1          72 LKQGAYDEVIK-------GAAGVAHIASVVS-----FSNK---YDEVVTPAIGGTLNALRAAAA----TPSVKRFVLTSS  132 (342)
T ss_dssp             TSTTTTTTTTT-------TCSEEEECCCCCS-----CCSC---HHHHHHHHHHHHHHHHHHHHT----CTTCCEEEEECC
T ss_pred             cchhhhhhhcc-------cchhhhhhccccc-----cccc---ccccccchhhhHHHHHHhhhc----cccccccccccc
Confidence            99987766543       5899999998643     1223   345677899999888776543    224578999988


Q ss_pred             CCCCCCCCC------------------------------CchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGGSSTP------------------------------LTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~~~~~------------------------------~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ..+...+.+                              ....|+.||.+.+.++..+++... .++++.+++|+.+--|
T Consensus       133 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp  211 (342)
T d1y1pa1         133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGT  211 (342)
T ss_dssp             GGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECC
T ss_pred             ceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCC
Confidence            633221111                              124699999999999999888764 4688889999887554


Q ss_pred             c
Q 017635          239 L  239 (368)
Q Consensus       239 ~  239 (368)
                      .
T Consensus       212 ~  212 (342)
T d1y1pa1         212 I  212 (342)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=2.2e-15  Score=140.22  Aligned_cols=171  Identities=16%  Similarity=0.139  Sum_probs=125.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +||||||+|.||..++++|+++|++|++++|............+..                ...++.++++|++|.+.+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl~d~~~l   65 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL----------------GGKHPTFVEGDIRNEALM   65 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH----------------HTSCCEEEECCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh----------------cCCCCEEEEeecCCHHHH
Confidence            4999999999999999999999999999987322211111221111                124788999999999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      .++++..     ++|+|||+|+...     ...+.++....+++|+.|+.++++++...     +-.++|++||......
T Consensus        66 ~~~~~~~-----~~d~ViHlAa~~~-----~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~-----~v~~~i~~Ss~~vy~~  130 (338)
T d1udca_          66 TEILHDH-----AIDTVIHFAGLKA-----VGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNFIFSSSATVYGD  130 (338)
T ss_dssp             HHHHHHT-----TCSEEEECCSCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHH-----TCCEEEEEEEGGGGCS
T ss_pred             HHHHhcc-----CCCEEEECCCccc-----hhhHHhCHHHHHHhHHHHHHHHHHHHHHh-----CCCEEEecCcceEEcc
Confidence            8887753     6999999999643     11233456789999999999998887654     3467888887532211


Q ss_pred             C-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 S-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ~-----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      .           ......|+.+|.+.+.+.+....+.  .++.+..++|+.+-.+
T Consensus       131 ~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T d1udca_         131 QPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             CCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             ccccccccccccCCCcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEec
Confidence            1           1235689999999999998777664  3688888888887665

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.61  E-value=1.9e-15  Score=140.60  Aligned_cols=187  Identities=15%  Similarity=0.057  Sum_probs=131.5

Q ss_pred             cccccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCce
Q 017635           21 ANMVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAK  100 (368)
Q Consensus        21 ~~~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  100 (368)
                      ....+......++|++|||||+|.||.+++++|.++|++|++++|....-......++......            ....
T Consensus         4 ~~~~~~~~~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~------------~~~~   71 (341)
T d1sb8a_           4 RYEELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEK------------QWSN   71 (341)
T ss_dssp             HHHHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHH------------HHTT
T ss_pred             hHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhc------------ccCC
Confidence            3334445556678999999999999999999999999999999873221111111221111000            1246


Q ss_pred             eEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCC
Q 017635          101 VAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKG  180 (368)
Q Consensus       101 v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~  180 (368)
                      +.++.+|..|........       ...|.++|.++....     ..+.++....+++|+.|+.++.+++...     +.
T Consensus        72 ~~~~~~d~~d~~~~~~~~-------~~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~-----~~  134 (341)
T d1sb8a_          72 FKFIQGDIRNLDDCNNAC-------AGVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDA-----KV  134 (341)
T ss_dssp             EEEEECCTTSHHHHHHHH-------TTCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHT-----TC
T ss_pred             eeEEeecccccccccccc-------ccccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhc-----CC
Confidence            888999999988765443       367889888875431     2245667889999999999998877542     34


Q ss_pred             cEEEEEcCCCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          181 GHIFNMDGAGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       181 g~Iv~isS~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .++|++||......          +..+...|+.||.+.+.+++.+++..   ++++..++|+.|-.+.
T Consensus       135 ~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         135 QSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             SEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred             ceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence            68999988632211          12234789999999999999998776   6888899998776553

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=8.9e-15  Score=135.50  Aligned_cols=177  Identities=14%  Similarity=0.051  Sum_probs=128.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-----HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-----SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++|||||+|.||.+++++|+++|++|+.++|...     +..........                .....+.++.+|+
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~Di   65 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHN----------------VNKALMKLHYADL   65 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC------------------------CCEEEEECCT
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhh----------------ccccceEEEEccc
Confidence            89999999999999999999999999999998532     22111111111                0235688899999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++.+++++.++..     ++|++||+|+....     ..+.++....+++|+.+...+..++.....+.....+++..||
T Consensus        66 ~~~~~~~~~~~~~-----~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss  135 (339)
T d1n7ha_          66 TDASSLRRWIDVI-----KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS  135 (339)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred             cCHHHHHHHHhhh-----ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence            9999999887754     79999999997541     2233556788999999999998888765544323455666655


Q ss_pred             CCCCCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          189 AGSGGS---------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       189 ~~~~~~---------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ......         +..+...|+.+|.+.+.++...++..   |+.+..++|+.|--|.
T Consensus       136 ~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         136 SEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPR  192 (339)
T ss_dssp             GGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             ceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCC
Confidence            421111         12235689999999999999888765   6999999998776553

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=8e-15  Score=136.38  Aligned_cols=174  Identities=13%  Similarity=0.031  Sum_probs=123.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH-----HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE-----SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      |++|||||+|.||.+++++|+++|++|+.++|...     +++.........                ...++.++.+|+
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~Dl   65 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH----------------IEGNMKLHYGDL   65 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC-------------------------CEEEEECCT
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh----------------ccCCcEEEEeec
Confidence            34499999999999999999999999999999643     111111111110                234688999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +|.+.+.++++..     .++++++.++...     ...+.++....+++|+.|+.++.+++..+-..  +..++|++||
T Consensus        66 ~d~~~~~~~~~~~-----~~~~v~~~~a~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~--~~~~~i~~SS  133 (347)
T d1t2aa_          66 TDSTCLVKIINEV-----KPTEIYNLGAQSH-----VKISFDLAEYTADVDGVGTLRLLDAVKTCGLI--NSVKFYQAST  133 (347)
T ss_dssp             TCHHHHHHHHHHH-----CCSEEEECCSCCC-----HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT--TTCEEEEEEE
T ss_pred             CCchhhHHHHhhc-----ccceeeeeeeccc-----cchhhccchhhhhhHHHHHHHHHHHHHHcCCC--CCcEEEEecc
Confidence            9999999988765     7889999988643     12234455677899999999998877554221  2457999987


Q ss_pred             CCCCCC----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          189 AGSGGS----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       189 ~~~~~~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ......          +..+...|+.||.+.+.++..+++.+   ++.+..++|+.+-.|
T Consensus       134 ~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp  190 (347)
T d1t2aa_         134 SELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  190 (347)
T ss_dssp             GGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             hheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence            632111          11234679999999999999888775   688888888766554

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.55  E-value=3.9e-14  Score=131.97  Aligned_cols=176  Identities=16%  Similarity=0.073  Sum_probs=129.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +++|+||||||+|.||.+++++|+++|++|++++|+..+.....+..+                  ....+.++.+|++|
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~------------------~~~~i~~~~~Dl~d   67 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR------------------VADGMQSEIGDIRD   67 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT------------------TTTTSEEEECCTTC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh------------------cccCCeEEEeeccC
Confidence            478999999999999999999999999999999998765433322211                  12358889999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      ++.+.++.+..     .+|+++|.|+....     ..+.+..+..+++|+.|+.++++++...    +....++..|+..
T Consensus        68 ~~~l~~~~~~~-----~~~~v~~~aa~~~~-----~~~~~~~~~~~~~Nv~g~~n~l~~~~~~----~~~~~~~~~s~~~  133 (356)
T d1rkxa_          68 QNKLLESIREF-----QPEIVFHMAAQPLV-----RLSYSEPVETYSTNVMGTVYLLEAIRHV----GGVKAVVNITSDK  133 (356)
T ss_dssp             HHHHHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH----CCCCEEEEECCGG
T ss_pred             hHhhhhhhhhc-----hhhhhhhhhccccc-----cccccCCccccccccccchhhhhhhhcc----ccccccccccccc
Confidence            99999887764     79999999987541     2234556788999999999998877553    1234555555432


Q ss_pred             CCCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhC------CCCeEEEEEecCcccCc
Q 017635          191 SGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESK------RSKVGVHTASPGMVLTD  238 (368)
Q Consensus       191 ~~~~~-----------~~~~~~Y~aSKaal~~l~~~la~e~~------~~gI~v~~v~PG~v~T~  238 (368)
                      .....           ..+...|+.+|...+.+.+.++.++.      ..++.+..+.|+.+--|
T Consensus       134 ~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp  198 (356)
T d1rkxa_         134 CYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGG  198 (356)
T ss_dssp             GBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECT
T ss_pred             cccccccccccccccccCCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCC
Confidence            22111           12345799999999999998887654      24688889998876543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.54  E-value=3.2e-14  Score=133.53  Aligned_cols=175  Identities=13%  Similarity=0.146  Sum_probs=125.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEE-EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +||||||+|.||.+++++|+++|++|++ +++......  ...+..               -....++.++.+|++|.+.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~---------------~~~~~~~~~~~~Dl~d~~~   64 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSD---------------ISESNRYNFEHADICDSAE   64 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTT---------------TTTCTTEEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHh---------------hhhcCCcEEEEccCCCHHH
Confidence            5899999999999999999999998555 443211100  000000               0023578899999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC----CCCcEEEEEcCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ----PKGGHIFNMDGA  189 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~----~~~g~Iv~isS~  189 (368)
                      ++++++..     ++|+|||+|+....     ..+.++....+++|+.|+.++.+.+...-...    .+..++|++||.
T Consensus        65 l~~~~~~~-----~~d~VihlAa~~~~-----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~  134 (361)
T d1kewa_          65 ITRIFEQY-----QPDAVMHLAAESHV-----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD  134 (361)
T ss_dssp             HHHHHHHH-----CCSEEEECCSCCCH-----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG
T ss_pred             HHHHHHhC-----CCCEEEECccccch-----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc
Confidence            99887754     79999999986431     12334456789999999999999987765431    124589999886


Q ss_pred             CCCCC--------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          190 GSGGS--------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       190 ~~~~~--------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .....                    +..+...|+.||.+.+.+++.++...   |+.+..++|+.|-.|.
T Consensus       135 ~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         135 EVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             GGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTT
T ss_pred             eeeCCCccCCccccccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcC
Confidence            32211                    01223569999999999999998776   6899999998877654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=4.8e-14  Score=129.58  Aligned_cols=172  Identities=15%  Similarity=0.010  Sum_probs=123.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+||||||+|.||++++++|+++|++|+.++|......  ...+....               ...++.++.+|++|.++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~--~~~l~~~~---------------~~~~~~~~~~Dl~d~~~   63 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDT--RWRLRELG---------------IEGDIQYEDGDMADACS   63 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC--CHHHHHTT---------------CGGGEEEEECCTTCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCccc--HHHHHHhc---------------ccCCcEEEEccccChHH
Confidence            78999999999999999999999999999998653211  01111110               23568999999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.+.+...     ..++++++|+....  .   ...++....+++|+.|+.+++.++...    +...++++.||.....
T Consensus        64 ~~~~~~~~-----~~~~~~~~a~~~~~--~---~~~~~~~~~~~~n~~g~~~~l~~~~~~----~~~~~~i~~Ss~~~~~  129 (321)
T d1rpna_          64 VQRAVIKA-----QPQEVYNLAAQSFV--G---ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFG  129 (321)
T ss_dssp             HHHHHHHH-----CCSEEEECCSCCCH--H---HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGC
T ss_pred             hhhhhccc-----cccccccccccccc--c---ccccchHHHHhhhhhchHHHHHHHHHh----CCCcccccccchhhcC
Confidence            99887765     67888888876441  1   111235678899999999998877553    2345677776642211


Q ss_pred             C----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          194 S----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       194 ~----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .          +......|+.+|.+.+.+.+.++.+.   ++++..+.|+.+--|.
T Consensus       130 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         130 LIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  182 (321)
T ss_dssp             SCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             cccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCC
Confidence            1          11234789999999999999988776   5888888887665553

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=6.2e-14  Score=128.50  Aligned_cols=153  Identities=15%  Similarity=0.119  Sum_probs=116.2

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .|+||||||+|.||.+++++|+++|+.|+++++..                                     .+|+.|.+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------------------------~~~~~~~~   44 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------------------------ELNLLDSR   44 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------------------------TCCTTCHH
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------------------------hccccCHH
Confidence            36899999999999999999999999988765421                                     24899999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      .++.+++.-     .+|.++|+|+....    ......+....+++|+.|+.++++++...     +-.++|++||....
T Consensus        45 ~~~~~~~~~-----~~d~v~~~a~~~~~----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~-----~v~~~i~~SS~~vy  110 (315)
T d1e6ua_          45 AVHDFFASE-----RIDQVYLAAAKVGG----IVANNTYPADFIYQNMMIESNIIHAAHQN-----DVNKLLFLGSSCIY  110 (315)
T ss_dssp             HHHHHHHHH-----CCSEEEECCCCCCC----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEEEEECCGGGS
T ss_pred             HHHHHHhhc-----CCCEEEEcchhccc----cccchhhHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECCceEc
Confidence            998887642     69999999976431    11233445667889999999998876543     35689999986432


Q ss_pred             CCC---------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          193 GSS---------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       193 ~~~---------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ...               .+....|+.||.+.+.+++.+.++.   |+++..++|+.|--|.
T Consensus       111 g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         111 PKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             CTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred             CCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence            111               1223579999999999999998876   7999999998886553

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=7e-14  Score=130.02  Aligned_cols=172  Identities=17%  Similarity=0.101  Sum_probs=122.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeC------ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASR------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      |+||||||+|.||.+++++|+++|++|+++++      +.....+..+.+...                ...++.++.+|
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~D   66 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL----------------TGRSVEFEEMD   66 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH----------------HTCCCEEEECC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh----------------cCCCcEEEEee
Confidence            78999999999999999999999999999864      111111122222221                23578899999


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++|.+++++++..     ..+|+++|.|+....     ..+.++....+++|+.|+.++.+++..    . +-.+++++|
T Consensus        67 l~d~~~l~~~~~~-----~~~~~i~h~Aa~~~~-----~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~-~v~~~i~~s  131 (346)
T d1ek6a_          67 ILDQGALQRLFKK-----YSFMAVIHFAGLKAV-----GESVQKPLDYYRVNLTGTIQLLEIMKA----H-GVKNLVFSS  131 (346)
T ss_dssp             TTCHHHHHHHHHH-----CCEEEEEECCSCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----T-TCCEEEEEE
T ss_pred             ccccccccccccc-----cccccccccccccCc-----HhhHhCHHHHHHhhhcccccccchhhh----c-Ccccccccc
Confidence            9999999887764     368899999997541     223344567899999999998777643    2 345788887


Q ss_pred             CCCCCCCC-----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          188 GAGSGGSS-----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       188 S~~~~~~~-----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      |+......           ......|+.+|.+.+...+.+++..  .++....+.|+.+-.+
T Consensus       132 s~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~  191 (346)
T d1ek6a_         132 SATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGA  191 (346)
T ss_dssp             EGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECC
T ss_pred             cceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceecc
Confidence            75322211           1233579999999999888776532  4678888888766554

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.51  E-value=3e-13  Score=124.56  Aligned_cols=155  Identities=17%  Similarity=0.101  Sum_probs=110.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSS-ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +||||||+|.||.+++++|+++|++|+++++-. .........+.                  ...++.++.+|++|.++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~------------------~~~~~~~i~~Di~~~~~   63 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS------------------SLGNFEFVHGDIRNKND   63 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH------------------TTCCCEEEECCTTCHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh------------------ccCCcEEEEcccCCHHH
Confidence            589999999999999999999999999987522 11111222222                  22578899999999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.++++..     ++|++||+|+....     ....++....+++|+.|+.++++++...    +....|++.|+.....
T Consensus        64 l~~~~~~~-----~~d~Vih~aa~~~~-----~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~  129 (338)
T d1orra_          64 VTRLITKY-----MPDSCFHLAGQVAM-----TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYG  129 (338)
T ss_dssp             HHHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGT
T ss_pred             HHHHHHhc-----CCceEEeecccccc-----cccccChHHHHHHHHHHHHHHHHhhhcc----cccccccccccccccc
Confidence            99988765     69999999987541     1233456788999999999998876553    1233444444331111


Q ss_pred             CC--------------------------CCCchhhHHHHHHHHHHHHHHHHHhC
Q 017635          194 SS--------------------------TPLTAVYGSTKCGLRQLQASLFKESK  221 (368)
Q Consensus       194 ~~--------------------------~~~~~~Y~aSKaal~~l~~~la~e~~  221 (368)
                      ..                          ......|+.+|...+.+.......+.
T Consensus       130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         130 DLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             TCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccccccccccccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence            10                          12346899999999999988888774

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=2.4e-13  Score=127.19  Aligned_cols=175  Identities=14%  Similarity=0.049  Sum_probs=125.8

Q ss_pred             cccccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           23 MVLEEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        23 ~~~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +..+...+-++.+||||||+|.||.+++++|+++|++|++++|......      .                 .......
T Consensus         5 ~~~~~~~~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~-----------------~~~~~~~   61 (363)
T d2c5aa1           5 LEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------T-----------------EDMFCDE   61 (363)
T ss_dssp             CCCCCSCTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------C-----------------GGGTCSE
T ss_pred             ccccCcCCCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------h-----------------hhcccCc
Confidence            3333433446678999999999999999999999999999987543210      0                 0113456


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      +..+|+.+.+++.++.+       .+|.+||.|+.... .   ....+.....+.+|+.++.+++.++...     +-.+
T Consensus        62 ~~~~D~~~~~~~~~~~~-------~~d~Vih~a~~~~~-~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~-----~vk~  125 (363)
T d2c5aa1          62 FHLVDLRVMENCLKVTE-------GVDHVFNLAADMGG-M---GFIQSNHSVIMYNNTMISFNMIEAARIN-----GIKR  125 (363)
T ss_dssp             EEECCTTSHHHHHHHHT-------TCSEEEECCCCCCC-H---HHHTTCHHHHHHHHHHHHHHHHHHHHHT-----TCSE
T ss_pred             EEEeechhHHHHHHHhh-------cCCeEeeccccccc-c---cccccccccccccccchhhHHHHhHHhh-----Cccc
Confidence            77889999888766543       68999999987541 1   1112345777889999999998876543     4568


Q ss_pred             EEEEcCCCCCCCC-----------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          183 IFNMDGAGSGGSS-----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       183 Iv~isS~~~~~~~-----------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      +|++||.......                 ..+...|+.||.+.+.+++.+.++.   |+++..++|+.+-.+.
T Consensus       126 ~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         126 FFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             EEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             cccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence            9999886332211                 1124579999999999999888776   7999999998887653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.48  E-value=5.7e-14  Score=130.77  Aligned_cols=169  Identities=14%  Similarity=0.160  Sum_probs=117.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .|.||||||+|.||.+++++|+++|+.|.+++++.-.-......+                ....+.++.++.+|++|.+
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~----------------~~~~~~~i~~~~~Di~d~~   65 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----------------EAILGDRVELVVGDIADAE   65 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----------------GGGCSSSEEEEECCTTCHH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHH----------------HHhhcCCeEEEEccCCCHH
Confidence            478999999999999999999999987555544310000000000                0013457899999999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      .+..++.       ..|.++|.|+....     ....++....+++|+.|+.+++..+...      +.++|++||+...
T Consensus        66 ~~~~~~~-------~~~~v~~~a~~~~~-----~~~~~~~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vy  127 (346)
T d1oc2a_          66 LVDKLAA-------KADAIVHYAAESHN-----DNSLNDPSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVY  127 (346)
T ss_dssp             HHHHHHT-------TCSEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGG
T ss_pred             HHHHHHh-------hhhhhhhhhhcccc-----cchhhCcccceeeehHhHHhhhhhhccc------cccccccccceEe
Confidence            9887753       57889999987541     1122345678899999999998876543      2456666654221


Q ss_pred             CC----------------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          193 GS----------------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       193 ~~----------------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ..                      +..+...|+.+|.+.+.+++.+.++.   |+++.+++|+.|-.|
T Consensus       128 g~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp  192 (346)
T d1oc2a_         128 GDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGP  192 (346)
T ss_dssp             CCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEEST
T ss_pred             cccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCC
Confidence            10                      11123579999999999999888776   799999999888665

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.46  E-value=1.4e-12  Score=122.95  Aligned_cols=180  Identities=14%  Similarity=0.079  Sum_probs=124.0

Q ss_pred             CeEEEEcCCChHHHHHHHHHHH-CCCeEEEEeC---------ChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           34 RNVVITGSTRGLGKALAREFLL-SGDRVVVASR---------SSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~-~G~~Vil~~R---------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      .+||||||+|.||..++++|++ .|++|+++++         ..+..+.....+....         ..........+.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~   73 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD---------GPKPPWADRYAAL   73 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSC---------SSCCTTTTCCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhc---------cccccccccceEE
Confidence            3699999999999999999986 6899999874         1122233333332210         0111112346788


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHI  183 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~I  183 (368)
                      +.+|++|.+.++++++.    ..++|+++|.|+....     ....+.....+++|+.++..+++++...     +..++
T Consensus        74 ~~~Di~d~~~l~~~~~~----~~~~d~ViH~Aa~~~~-----~~~~~~~~~~~~~N~~~t~~~l~~~~~~-----~~~~~  139 (383)
T d1gy8a_          74 EVGDVRNEDFLNGVFTR----HGPIDAVVHMCAFLAV-----GESVRDPLKYYDNNVVGILRLLQAMLLH-----KCDKI  139 (383)
T ss_dssp             EESCTTCHHHHHHHHHH----SCCCCEEEECCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHT-----TCCEE
T ss_pred             EECcccCHHHhhhhhhc----cceeehhhcccccccc-----cccccccccccccccccccccchhhhcc-----CCccc
Confidence            99999999998887754    3578999999997541     1233446678899999999998776542     34566


Q ss_pred             EEEcCCCCCCC-----------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          184 FNMDGAGSGGS-----------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       184 v~isS~~~~~~-----------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      +++++......                 ...+...|+.+|.+.+.+++.+...+   |+.+.+++|+.+--|.
T Consensus       140 ~~~~s~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         140 IFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (383)
T ss_dssp             EEEEEGGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             ccccccccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccC
Confidence            66655422111                 11234679999999999999888765   7899999998875543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=7.7e-14  Score=122.76  Aligned_cols=162  Identities=19%  Similarity=0.196  Sum_probs=115.2

Q ss_pred             cccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           25 LEEHCKAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        25 ~~~~~~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +++.+++++|+||||||||.||.+++++|+++|.  +|++++|++.+...                       .....+.
T Consensus         6 ~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-----------------------~~~~~i~   62 (232)
T d2bkaa1           6 LREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-----------------------EAYKNVN   62 (232)
T ss_dssp             HHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-----------------------GGGGGCE
T ss_pred             HHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-----------------------cccceee
Confidence            3444566789999999999999999999999995  89999997643211                       0123566


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      ...+|+.+.+++.+.       +...|++||++|...        .........++|+.++..+++.+..    . +-.+
T Consensus        63 ~~~~D~~~~~~~~~~-------~~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~  122 (232)
T d2bkaa1          63 QEVVDFEKLDDYASA-------FQGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKA----G-GCKH  122 (232)
T ss_dssp             EEECCGGGGGGGGGG-------GSSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHH----T-TCCE
T ss_pred             eeeeccccccccccc-------ccccccccccccccc--------cccchhhhhhhcccccceeeecccc----c-Cccc
Confidence            677888876655433       346899999998642        2334566788899999998887743    2 4668


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCcc
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDL  239 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~  239 (368)
                      +|++|+....   ......|+.+|...+...+.       .|. ++..++||.+-.+.
T Consensus       123 fi~~Ss~~~~---~~~~~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~  170 (232)
T d2bkaa1         123 FNLLSSKGAD---KSSNFLYLQVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDR  170 (232)
T ss_dssp             EEEECCTTCC---TTCSSHHHHHHHHHHHHHHT-------TCCSEEEEEECCEEECTT
T ss_pred             cccCCccccc---cCccchhHHHHHHhhhcccc-------ccccceEEecCceeecCC
Confidence            9999876322   23345799999987765432       233 57789999987653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=3.2e-13  Score=125.17  Aligned_cols=163  Identities=11%  Similarity=0.049  Sum_probs=117.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      +||||||+|.||.+++++|+++| ++|+++++.........                      ...++.++++|+++.++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----------------------~~~~~~~i~~Di~~~~~   59 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----------------------NHPHFHFVEGDISIHSE   59 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----------------------TCTTEEEEECCTTTCSH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----------------------cCCCeEEEECccCChHH
Confidence            58999999999999999999999 58999888654322110                      23578999999998776


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                      +.+.+.   +   .+|++||+|+....     ....++....+++|+.|+.++++.+..    .  +.+.++.||.....
T Consensus        60 ~~~~~~---~---~~d~Vih~a~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~~~~~----~--~~~~~~~ss~~~~~  122 (342)
T d2blla1          60 WIEYHV---K---KCDVVLPLVAIATP-----IEYTRNPLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYG  122 (342)
T ss_dssp             HHHHHH---H---HCSEEEECBCCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGB
T ss_pred             HHHHHH---h---CCCccccccccccc-----cccccCCcccccccccccccccccccc----c--cccccccccccccc
Confidence            655332   1   48999999997541     122344567899999999999888643    2  34556666542211


Q ss_pred             CC-----------------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          194 SS-----------------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       194 ~~-----------------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      ..                 ..+...|+.||.+.+.+++.+++..   |+.+..++|..+-.+.
T Consensus       123 ~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         123 MCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             TCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSS
T ss_pred             cccccccccccccccccccCCCcchhhhcccchhhhhhhhhccc---CceeEEeecccccccc
Confidence            11                 0223679999999999999998876   6888888888776653

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.44  E-value=2.5e-12  Score=112.01  Aligned_cols=203  Identities=13%  Similarity=0.129  Sum_probs=123.5

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCe--EEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDR--VVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~--Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .++||||||+|+||++++++|+++|++  |+...|++++.+.                        ....+.++.+|+++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~------------------------~~~~~~~~~~d~~~   58 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK------------------------IGGEADVFIGDITD   58 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH------------------------TTCCTTEEECCTTS
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh------------------------ccCCcEEEEeeecc
Confidence            489999999999999999999999965  6667888765432                        22467789999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCC--------CCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcE
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKP--------LLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGH  182 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~--------~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~  182 (368)
                      .+++.++++       .+|.+||+|+.......        ..............+|+.++..+.......     ..+.
T Consensus        59 ~~~~~~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  126 (252)
T d2q46a1          59 ADSINPAFQ-------GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA-----GVKH  126 (252)
T ss_dssp             HHHHHHHHT-------TCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH-----TCSE
T ss_pred             ccccccccc-------cceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc-----cccc
Confidence            998887654       68999999986541111        111112234556788999988887766544     3566


Q ss_pred             EEEEcCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCcccc--hhhhh--hhhcCC
Q 017635          183 IFNMDGAGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGSTIQ--NKQMF--NIICEL  258 (368)
Q Consensus       183 Iv~isS~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~--~~~~~--~~~~~~  258 (368)
                      ....++........+....+...+.........+..+   .|+++..++||.+-.+.........  .....  ..-...
T Consensus       127 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~  203 (252)
T d2q46a1         127 IVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVP  203 (252)
T ss_dssp             EEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEE
T ss_pred             cccccccccCCCCcccccccccchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccCcccccCCCCeEE
Confidence            7777665322222222222222223322333333333   4789999999998665432111100  00000  001124


Q ss_pred             HHHHHHHhhhhhhhcc
Q 017635          259 PETVARTLVPRIRVVK  274 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~  274 (368)
                      .+++|+.++..+..++
T Consensus       204 ~~Dva~a~~~~l~~~~  219 (252)
T d2q46a1         204 RADVAEVCIQALLFEE  219 (252)
T ss_dssp             HHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHHHhCCcc
Confidence            6788888776665443

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.4e-13  Score=126.37  Aligned_cols=162  Identities=20%  Similarity=0.202  Sum_probs=111.7

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+||||||+|.||++++++|+++|++|++++|......+.....                  ....++.....|+.+.  
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~------------------~~~~~~d~~~~~~~~~--   61 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW------------------IGHENFELINHDVVEP--   61 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG------------------TTCTTEEEEECCTTSC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh------------------cCCCceEEEehHHHHH--
Confidence            78999999999999999999999999999987322110000000                  0123445555555332  


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGG  193 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~  193 (368)
                                .+.++|+|||+|+.... ..    ..++..+.+++|+.|+.++++++...      +.++|++||.....
T Consensus        62 ----------~~~~~d~VihlAa~~~~-~~----~~~~~~~~~~~Nv~g~~~ll~~~~~~------~~k~I~~SS~~vy~  120 (312)
T d2b69a1          62 ----------LYIEVDQIYHLASPASP-PN----YMYNPIKTLKTNTIGTLNMLGLAKRV------GARLLLASTSEVYG  120 (312)
T ss_dssp             ----------CCCCCSEEEECCSCCSH-HH----HTTCHHHHHHHHHHHHHHHHHHHHHH------TCEEEEEEEGGGGB
T ss_pred             ----------HHcCCCEEEECcccCCc-hh----HHhCHHHHHHHHHHHHHHHHHHHHHc------CCcEEEEEChheec
Confidence                      12369999999996531 11    11234678899999999998876432      24788888753221


Q ss_pred             C---------------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          194 S---------------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       194 ~---------------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .               +..+...|+.||.+.+.+++.++++.   |+.+..++|+.|--|.
T Consensus       121 ~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         121 DPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPR  178 (312)
T ss_dssp             SCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             CCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCC
Confidence            1               11234679999999999999998876   7999999999887654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.35  E-value=1.5e-12  Score=119.76  Aligned_cols=168  Identities=13%  Similarity=0.119  Sum_probs=118.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeE------EEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRV------VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~V------il~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      +||||||+|.||.+++++|+++|++|      +..++.......  ..+..               .....++.++..|.
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~--~~~~~---------------~~~~~~~~~~~~d~   64 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNR--ANLAP---------------VDADPRLRFVHGDI   64 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCG--GGGGG---------------GTTCTTEEEEECCT
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccH--hHhhh---------------hhcCCCeEEEEecc
Confidence            58999999999999999999999754      434322110000  00000               00235788999999


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++........       ..+|.++|.|+....     ....+.....+++|+.|+.++++++..    . +..++|++||
T Consensus        65 ~~~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~N~~gt~~ll~~~~~----~-~~~~~I~~Ss  127 (322)
T d1r6da_          65 RDAGLLAREL-------RGVDAIVHFAAESHV-----DRSIAGASVFTETNVQGTQTLLQCAVD----A-GVGRVVHVST  127 (322)
T ss_dssp             TCHHHHHHHT-------TTCCEEEECCSCCCH-----HHHHHCCHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEEEE
T ss_pred             ccchhhhccc-------cccceEEeecccccc-----cccccchHHHhhhhHHHHHHHHHHHHH----c-CCceEEEeec
Confidence            9998766432       368999999987541     223445677889999999999887753    2 3568999988


Q ss_pred             CCCCCCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcc
Q 017635          189 AGSGGSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDL  239 (368)
Q Consensus       189 ~~~~~~~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~  239 (368)
                      .......          ..+...|+.||.+.+.+++.++++.   |+++..++|+.|-.|.
T Consensus       128 ~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~  185 (322)
T d1r6da_         128 NQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPY  185 (322)
T ss_dssp             GGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred             ceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcC
Confidence            6322111          1234689999999999999998876   6999999999887653

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.17  E-value=2.4e-10  Score=103.12  Aligned_cols=200  Identities=13%  Similarity=0.052  Sum_probs=112.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT-VTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++||||||+|.||++++++|+++|++|++++|+....... .+.+.. .               ....+.++.+|++|.+
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~-~---------------~~~~v~~v~~d~~d~~   67 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLY-F---------------KQLGAKLIEASLDDHQ   67 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHH-H---------------HTTTCEEECCCSSCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhh-h---------------ccCCcEEEEeecccch
Confidence            4599999999999999999999999999999975432111 111111 1               1245788999999998


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                      ++.+.++       ..+.++++++....                ..|..+...++.++.    +. ...++++.||.+..
T Consensus        68 ~~~~~~~-------~~~~~~~~~~~~~~----------------~~~~~~~~~~l~~a~----~~-~~~~~v~~Ss~g~~  119 (312)
T d1qyda_          68 RLVDALK-------QVDVVISALAGGVL----------------SHHILEQLKLVEAIK----EA-GNIKRFLPSEFGMD  119 (312)
T ss_dssp             HHHHHHT-------TCSEEEECCCCSSS----------------STTTTTHHHHHHHHH----HS-CCCSEEECSCCSSC
T ss_pred             hhhhhcc-------Ccchhhhhhhhccc----------------ccchhhhhHHHHHHH----Hh-cCCcEEEEeecccc
Confidence            8876654       57889998875431                123334444444432    22 34566677665322


Q ss_pred             CCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCc----c--cchhhh-------hhhhcCCH
Q 017635          193 GSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS----T--IQNKQM-------FNIICELP  259 (368)
Q Consensus       193 ~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~--~~~~~~-------~~~~~~~p  259 (368)
                      .........|..++.......+....+   .++....++||.+--+......    .  ...+..       ........
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  196 (312)
T d1qyda_         120 PDIMEHALQPGSITFIDKRKVRRAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDE  196 (312)
T ss_dssp             TTSCCCCCSSTTHHHHHHHHHHHHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECH
T ss_pred             CCCcccccchhhhhhHHHHHHHHhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeH
Confidence            222212222333333333333332222   3677888888877432211100    0  000000       01111357


Q ss_pred             HHHHHHhhhhhhhccccccee
Q 017635          260 ETVARTLVPRIRVVKGSGKAI  280 (368)
Q Consensus       260 e~~a~~~~~~~~~~~~~~~~~  280 (368)
                      +++|+.++..+..++...+..
T Consensus       197 ~Dva~a~~~~l~~~~~~~~~~  217 (312)
T d1qyda_         197 DDVGTYTIKSIDDPQTLNKTM  217 (312)
T ss_dssp             HHHHHHHHHHTTCGGGSSSEE
T ss_pred             HHHHHHHHHHhcCccccCceE
Confidence            889999888776665544443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.10  E-value=1.7e-10  Score=99.21  Aligned_cols=149  Identities=19%  Similarity=0.242  Sum_probs=100.6

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|+|+||||||.||++++++|+++|+  +|+...|++..                           ...+   +..+..|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------------------------~~~~---~~~~~~d   51 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------------------------EHPR---LDNPVGP   51 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------------------------CCTT---EECCBSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------------------------hccc---ccccccc
Confidence            58999999999999999999999997  66766765321                           0112   3445555


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      ..++..      ...+.+|.+|+++|....       ....-+...++|+.++..+++.+..    . +..+++++||.+
T Consensus        52 ~~~~~~------~~~~~~d~vi~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~a~~----~-~v~~~i~~Ss~~  113 (212)
T d2a35a1          52 LAELLP------QLDGSIDTAFCCLGTTIK-------EAGSEEAFRAVDFDLPLAVGKRALE----M-GARHYLVVSALG  113 (212)
T ss_dssp             HHHHGG------GCCSCCSEEEECCCCCHH-------HHSSHHHHHHHHTHHHHHHHHHHHH----T-TCCEEEEECCTT
T ss_pred             hhhhhh------ccccchheeeeeeeeecc-------ccccccccccchhhhhhhccccccc----c-cccccccccccc
Confidence            544322      223568999999986431       1112356778899999888877633    3 467899998764


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCe-EEEEEecCcccCcc
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKV-GVHTASPGMVLTDL  239 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI-~v~~v~PG~v~T~~  239 (368)
                      +.   ......|..+|...+...+       ..+. +...++|+.|--+.
T Consensus       114 ~~---~~~~~~y~~~K~~~E~~l~-------~~~~~~~~I~Rp~~v~G~~  153 (212)
T d2a35a1         114 AD---AKSSIFYNRVKGELEQALQ-------EQGWPQLTIARPSLLFGPR  153 (212)
T ss_dssp             CC---TTCSSHHHHHHHHHHHHHT-------TSCCSEEEEEECCSEESTT
T ss_pred             cc---cccccchhHHHHHHhhhcc-------ccccccceeeCCcceeCCc
Confidence            32   2344679999988775443       2233 67889999886543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.10  E-value=6.1e-10  Score=99.25  Aligned_cols=143  Identities=17%  Similarity=0.187  Sum_probs=101.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +||||||||.||.+++++|.++|++|+.++|+.                                      +|++|.+++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------------------------~D~~d~~~~   44 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------------------------LDITNVLAV   44 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------------------------CCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------------------------ccCCCHHHH
Confidence            489999999999999999999999999998741                                      389999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++..     ++|++||+|+....     +......+..+..|+.....+.......      ...++..||......
T Consensus        45 ~~~l~~~-----~~d~vih~a~~~~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~  108 (281)
T d1vl0a_          45 NKFFNEK-----KPNVVINCAAHTAV-----DKCEEQYDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDG  108 (281)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCS
T ss_pred             HHHHHHc-----CCCEEEeecccccc-----ccccccchhhcccccccccccccccccc------cccccccccceeeec
Confidence            9887754     78999999987541     1233345677788888887776665443      345555555322111


Q ss_pred             ----------CCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          195 ----------STPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       195 ----------~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                                .......|+.+|...+.+.+.    .   +.+...+.|+.+--+
T Consensus       109 ~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~----~---~~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         109 EAKEPITEFDEVNPQSAYGKTKLEGENFVKA----L---NPKYYIVRTAWLYGD  155 (281)
T ss_dssp             CCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH----H---CSSEEEEEECSEESS
T ss_pred             cccccccccccccchhhhhhhhhHHHHHHHH----h---CCCccccceeEEeCC
Confidence                      123446799999887766543    2   456778999888544

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.05  E-value=2.2e-10  Score=102.78  Aligned_cols=129  Identities=19%  Similarity=0.198  Sum_probs=90.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +||||||+|-||.+++++|.++|+.| .++++...                                  +..|++|.+.+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~----------------------------------~~~Dl~~~~~~   46 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE----------------------------------FCGDFSNPKGV   46 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS----------------------------------SCCCTTCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc----------------------------------ccCcCCCHHHH
Confidence            49999999999999999999998644 44443211                                  34699999999


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSGGS  194 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~~~  194 (368)
                      +++++..     ++|+|||+||.... ..    +.+.-...+++|+.+...+.+++.    +  .+.+++++||......
T Consensus        47 ~~~i~~~-----~~D~Vih~Aa~~~~-~~----~~~~~~~~~~~n~~~~~~l~~~~~----~--~~~~~~~~ss~~~~~~  110 (298)
T d1n2sa_          47 AETVRKL-----RPDVIVNAAAHTAV-DK----AESEPELAQLLNATSVEAIAKAAN----E--TGAWVVHYSTDYVFPG  110 (298)
T ss_dssp             HHHHHHH-----CCSEEEECCCCCCH-HH----HTTCHHHHHHHHTHHHHHHHHHHT----T--TTCEEEEEEEGGGSCC
T ss_pred             HHHHHHc-----CCCEEEEecccccc-cc----cccCccccccccccccccchhhhh----c--cccccccccccccccC
Confidence            9888765     79999999997541 11    122346778999999998877652    2  3467777776532211


Q ss_pred             C----------CCCchhhHHHHHHHHHHHH
Q 017635          195 S----------TPLTAVYGSTKCGLRQLQA  214 (368)
Q Consensus       195 ~----------~~~~~~Y~aSKaal~~l~~  214 (368)
                      .          ......|+.+|.+.+.+.+
T Consensus       111 ~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~  140 (298)
T d1n2sa_         111 TGDIPWQETDATSPLNVYGKTKLAGEKALQ  140 (298)
T ss_dssp             CTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred             CCCCCCccccccCCCchHhhhhhhhhhhHH
Confidence            1          1234689999988776654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.96  E-value=2.5e-14  Score=121.75  Aligned_cols=46  Identities=33%  Similarity=0.444  Sum_probs=41.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEEN   80 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~   80 (368)
                      ++.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            4677888899999999999999999999999999999999988764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.96  E-value=1.3e-08  Score=90.70  Aligned_cols=193  Identities=11%  Similarity=0.089  Sum_probs=109.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH--HHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM--TVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .|+||||||+|.||++++++|+++|++|++++|+......  ....+...                ....+.++.+|+.+
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~d~~~   66 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF----------------KASGANIVHGSIDD   66 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH----------------HTTTCEEECCCTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh----------------ccCCcEEEEeeccc
Confidence            4789999999999999999999999999999997543211  11222211                12457788999999


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAG  190 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~  190 (368)
                      .++..+.++       ..|.++++++...                    ..+...+.+++...     ...++++.||.+
T Consensus        67 ~~~~~~~~~-------~~~~vi~~~~~~~--------------------~~~~~~~~~a~~~~-----~~~~~~~~s~~~  114 (307)
T d1qyca_          67 HASLVEAVK-------NVDVVISTVGSLQ--------------------IESQVNIIKAIKEV-----GTVKRFFPSEFG  114 (307)
T ss_dssp             HHHHHHHHH-------TCSEEEECCCGGG--------------------SGGGHHHHHHHHHH-----CCCSEEECSCCS
T ss_pred             chhhhhhhh-------hceeeeecccccc--------------------cchhhHHHHHHHHh-----ccccceeeeccc
Confidence            988777654       5789999887532                    12222333333222     345566766642


Q ss_pred             CCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCcccccCc----cc-chh-------hhhhhhcCC
Q 017635          191 SGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTDLLLSGS----TI-QNK-------QMFNIICEL  258 (368)
Q Consensus       191 ~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~----~~-~~~-------~~~~~~~~~  258 (368)
                      . .........+...+............+   .|+....++|+.+-.+......    .. ...       .........
T Consensus       115 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  190 (307)
T d1qyca_         115 N-DVDNVHAVEPAKSVFEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVK  190 (307)
T ss_dssp             S-CTTSCCCCTTHHHHHHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEEC
T ss_pred             c-ccccccccccccccccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCc
Confidence            2 222222222333333222222222223   3677888899877543221100    00 000       000011125


Q ss_pred             HHHHHHHhhhhhhhccccc
Q 017635          259 PETVARTLVPRIRVVKGSG  277 (368)
Q Consensus       259 pe~~a~~~~~~~~~~~~~~  277 (368)
                      .+++|+.++..+..++...
T Consensus       191 v~Dva~~~~~~l~~~~~~~  209 (307)
T d1qyca_         191 EEDIGTFTIKAVDDPRTLN  209 (307)
T ss_dssp             HHHHHHHHHTTSSCGGGTT
T ss_pred             HHHHHHHHHHHhcChhhcC
Confidence            8889998887776655433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.80  E-value=8.1e-08  Score=88.31  Aligned_cols=152  Identities=11%  Similarity=0.033  Sum_probs=94.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +.|+|+||||||.||.+++++|+++|++|+++.|+..+...  .++.                  ....+..+++|+.|.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~------------------~~~~v~~~~gD~~d~   61 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ------------------AIPNVTLFQGPLLNN   61 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH------------------TSTTEEEEESCCTTC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc------------------ccCCCEEEEeeCCCc
Confidence            46899999999999999999999999999999998765432  2221                  124578899999996


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGS  191 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~  191 (368)
                      .++.+.      .+...|.++.+.....       ..          |+....+++.++..    . +..+++..||...
T Consensus        62 ~~~~~~------a~~~~~~~~~~~~~~~-------~~----------~~~~~~~~~~aa~~----a-gv~~~v~~Ss~~~  113 (350)
T d1xgka_          62 VPLMDT------LFEGAHLAFINTTSQA-------GD----------EIAIGKDLADAAKR----A-GTIQHYIYSSMPD  113 (350)
T ss_dssp             HHHHHH------HHTTCSEEEECCCSTT-------SC----------HHHHHHHHHHHHHH----H-SCCSEEEEEECCC
T ss_pred             HHHHHH------HhcCCceEEeeccccc-------ch----------hhhhhhHHHHHHHH----h-CCCceEEEeeccc
Confidence            653221      1246788877654321       01          22223334444332    2 3345666666422


Q ss_pred             -CCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          192 -GGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       192 -~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                       ...+......|..+|...+.+.+.       .++....+.||.+..+
T Consensus       114 ~~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~vr~~~~~~~  154 (350)
T d1xgka_         114 HSLYGPWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNNN  154 (350)
T ss_dssp             GGGTSSCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGGG
T ss_pred             cccCCcccchhhhhhHHHHHHHHHh-------hccCceeeeeceeecc
Confidence             122223345677788766554332       3567788888876544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.76  E-value=1.2e-08  Score=91.45  Aligned_cols=159  Identities=13%  Similarity=0.169  Sum_probs=97.1

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ||||||+|.||..++++|+++|+ .|+++++-....+ . ..+.+                       ...+|..+.+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~-~~~~~-----------------------~~~~~~~~~~~~   56 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F-VNLVD-----------------------LNIADYMDKEDF   56 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-G-HHHHT-----------------------SCCSEEEEHHHH
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-h-hcccc-----------------------cchhhhccchHH
Confidence            89999999999999999999996 5777753221100 0 00100                       012333343333


Q ss_pred             HHHHHHHH--hHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCCCCC
Q 017635          115 QKLSNFAV--NEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGAGSG  192 (368)
Q Consensus       115 ~~~~~~i~--~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~~~~  192 (368)
                         .+...  ..+..+++++|.|+....    ...   ..+...+.|+.+...+.+.+...     +...++..|+. ..
T Consensus        57 ---~~~~~~~~~~~~~~~i~~~aa~~~~----~~~---~~~~~~~~~~~~~~~~l~~~~~~-----~i~~v~~ss~~-~~  120 (307)
T d1eq2a_          57 ---LIQIMAGEEFGDVEAIFHEGACSST----TEW---DGKYMMDNNYQYSKELLHYCLER-----EIPFLYASSAA-TY  120 (307)
T ss_dssp             ---HHHHHTTCCCSSCCEEEECCSCCCT----TCC---CHHHHHHHTHHHHHHHHHHHHHH-----TCCEEEEEEGG-GG
T ss_pred             ---HHHHhhhhcccchhhhhhhcccccc----ccc---ccccccccccccccccccccccc-----ccccccccccc-cc
Confidence               22222  234678899999886431    122   23556777888888877665443     22344444443 22


Q ss_pred             CCC----------CCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEecCcccCc
Q 017635          193 GSS----------TPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTASPGMVLTD  238 (368)
Q Consensus       193 ~~~----------~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~  238 (368)
                      ..+          .+....|+.+|.+.+.+++.+..+.   ++.+..++|..+--|
T Consensus       121 ~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         121 GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQIVGFRYFNVYGP  173 (307)
T ss_dssp             TTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSCEEEEEECEEESS
T ss_pred             ccccccccccccccccccccccccchhhhhcccccccc---ccccccccceeEeec
Confidence            221          1345689999999999998877654   677888888776554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=4.4e-05  Score=63.02  Aligned_cols=88  Identities=14%  Similarity=0.165  Sum_probs=64.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ..++++|+|+|.|+ ||.|++++..|++.|. +++++.|+.++.+++....+....               .........
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~---------------~~~~~~~~~   76 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNE---------------NTDCVVTVT   76 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHH---------------HSSCEEEEE
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHh---------------hcCcceEee
Confidence            34789999999997 6999999999999997 688999998777665443322111               122345577


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      |+.+.+++.....       ..|++||+....
T Consensus        77 ~~~~~~~~~~~~~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          77 DLADQQAFAEALA-------SADILTNGTKVG  101 (182)
T ss_dssp             ETTCHHHHHHHHH-------TCSEEEECSSTT
T ss_pred             ecccccchhhhhc-------ccceeccccCCc
Confidence            8988887765543       689999998654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.96  E-value=1.6e-05  Score=65.73  Aligned_cols=47  Identities=28%  Similarity=0.434  Sum_probs=39.6

Q ss_pred             cccccCC-CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           25 LEEHCKA-GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        25 ~~~~~~~-~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      +....++ +|++|+|+||++|+|.+.++-....|++|+.+++++++.+
T Consensus        21 l~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~   68 (182)
T d1v3va2          21 LLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA   68 (182)
T ss_dssp             HHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             HHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH
Confidence            3333444 4899999999999999999999999999999999987754

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.9e-05  Score=64.63  Aligned_cols=79  Identities=18%  Similarity=0.247  Sum_probs=55.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|++|+|+||+|++|...++.....|++|+++++++++.+.+ +++                    +..-   ..|.++.
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~--------------------Ga~~---vi~~~~~   83 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQN--------------------GAHE---VFNHREV   83 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT--------------------TCSE---EEETTST
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-ccc--------------------Cccc---ccccccc
Confidence            588999999999999999999989999999999988765433 221                    2221   2366665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +-.+++.+....  ..+|+++.+.|
T Consensus        84 ~~~~~i~~~t~~--~g~d~v~d~~g  106 (174)
T d1yb5a2          84 NYIDKIKKYVGE--KGIDIIIEMLA  106 (174)
T ss_dssp             THHHHHHHHHCT--TCEEEEEESCH
T ss_pred             cHHHHhhhhhcc--CCceEEeeccc
Confidence            544443332211  35899998876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.86  E-value=1e-05  Score=66.52  Aligned_cols=80  Identities=10%  Similarity=0.124  Sum_probs=56.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|++|+|+||++|+|...++-....|++|+.+++++++.+.+. ++                    +..   ...|.+++
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l--------------------Ga~---~vi~~~~~   83 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA--------------------GAW---QVINYREE   83 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH--------------------TCS---EEEETTTS
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc--------------------CCe---EEEECCCC
Confidence            4789999999999999999999999999999999998875432 22                    122   12366665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +-.+++.+ +- .-..+|+++.+.|.
T Consensus        84 d~~~~v~~-~t-~g~g~d~v~d~~g~  107 (179)
T d1qora2          84 DLVERLKE-IT-GGKKVRVVYDSVGR  107 (179)
T ss_dssp             CHHHHHHH-HT-TTCCEEEEEECSCG
T ss_pred             CHHHHHHH-Hh-CCCCeEEEEeCccH
Confidence            44444322 21 12358999998873

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.85  E-value=5.6e-05  Score=60.99  Aligned_cols=47  Identities=26%  Similarity=0.414  Sum_probs=41.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++++++++|.|+ |++|+.+++.|..+|+ ++.++.|+.++.++..+++
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~   68 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL   68 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh
Confidence            678999999998 9999999999999997 6999999999887776654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.80  E-value=4.4e-05  Score=62.10  Aligned_cols=74  Identities=23%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|+|+|.|| |.+|+.+|+.|+++|++|++++|+.+++++..+++                     ........+..+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---------------------~~~~~~~~~~~~~~   59 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---------------------QHSTPISLDVNDDA   59 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---------------------TTEEEEECCTTCHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---------------------cccccccccccchh
Confidence            689999987 89999999999999999999999999887655432                     22344455666666


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEcc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      .....+.       ..|.++...
T Consensus        60 ~~~~~i~-------~~~~~i~~~   75 (182)
T d1e5qa1          60 ALDAEVA-------KHDLVISLI   75 (182)
T ss_dssp             HHHHHHT-------TSSEEEECS
T ss_pred             hhHhhhh-------ccceeEeec
Confidence            5555432       467777543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.70  E-value=3.3e-05  Score=63.50  Aligned_cols=43  Identities=19%  Similarity=0.236  Sum_probs=37.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .+|.+|||+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~   72 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL   72 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH
Confidence            3578999999999999999998889999999999998886543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.66  E-value=4.6e-05  Score=63.24  Aligned_cols=47  Identities=21%  Similarity=0.224  Sum_probs=38.4

Q ss_pred             CCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 017635           33 PRNVVI-TGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        33 ~k~vlI-TGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      |++++| +||+||+|.+.++-....|++||.+.|+.++.++..+.+++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~   76 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKE   76 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHH
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhh
Confidence            455555 79999999999988888999999999988877777666655

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.65  E-value=5.4e-05  Score=62.22  Aligned_cols=40  Identities=23%  Similarity=0.276  Sum_probs=36.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      +|++|||+||+|++|...++.+...|++|+++++++++.+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~   64 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE   64 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc
Confidence            4789999999999999999998889999999999887654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.61  E-value=0.00058  Score=53.93  Aligned_cols=116  Identities=19%  Similarity=0.264  Sum_probs=70.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +.+++.|.|+ |.+|..+|..|+.+|  .+|++.++++++.+....++.....              ..........|. 
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~--------------~~~~~~~~~~d~-   67 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA--------------FTAPKKIYSGEY-   67 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG--------------GSCCCEEEECCG-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc--------------ccCCceEeeccH-
Confidence            3467888896 899999999999988  5899999999887766666644211              112223344443 


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                        ++           ...-|++|..||...  .+     .+.-...++.|.    .+.+...+.+.+....+.++++|
T Consensus        68 --~~-----------~~~adivvitag~~~--~~-----g~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          68 --SD-----------CKDADLVVITAGAPQ--KP-----GESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             --GG-----------GTTCSEEEECCCC-----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --HH-----------hccccEEEEeccccc--CC-----CCCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence              21           235799999999754  11     112233445554    44555666666665566666654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=9.1e-05  Score=51.83  Aligned_cols=43  Identities=21%  Similarity=0.296  Sum_probs=38.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      .++.+++|+||++|+|....+.+...|++|+.+.+++++.+.+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3678999999999999999998888999999999998887543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.57  E-value=0.00025  Score=57.29  Aligned_cols=82  Identities=17%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|.+|+|+| +|++|...++.+...|++|+++++++++++.+. ++                    +.... +..|-.+ 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~--------------------ga~~~-~~~~~~~-   81 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC--------------------GADVT-LVVDPAK-   81 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT--------------------TCSEE-EECCTTT-
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-Hc--------------------CCcEE-Eeccccc-
Confidence            467899997 689999999999999999999999998875432 22                    22222 2223222 


Q ss_pred             HHHHHHHHHHHhHcC-CCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFG-SIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g-~iD~li~nAG~  137 (368)
                      ++.....+++.+..| .+|++|.++|.
T Consensus        82 ~~~~~~~~~~~~~~g~g~D~vid~~g~  108 (170)
T d1e3ja2          82 EEESSIIERIRSAIGDLPNVTIDCSGN  108 (170)
T ss_dssp             SCHHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred             cccchhhhhhhcccccCCceeeecCCC
Confidence            223334444545443 58999999984

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.56  E-value=0.00016  Score=59.41  Aligned_cols=40  Identities=25%  Similarity=0.276  Sum_probs=35.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      +|.+|+|+|+ |++|...++.+...|+ +|+++++++++++.
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~   68 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKL   68 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccccc
Confidence            5899999997 7999999999999998 79999999988753

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.55  E-value=0.00044  Score=54.61  Aligned_cols=119  Identities=15%  Similarity=0.183  Sum_probs=73.2

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      |++.|+|+ |.+|..+|..|+.+|  .++++.++++++++....++......             ..........|.   
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~-------------~~~~~~~~~~d~---   64 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMAN-------------LEAHGNIVINDW---   64 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG-------------SSSCCEEEESCG---
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccc-------------cCCccceeccCH---
Confidence            67888995 899999999999988  48999999999887777777653221             122233333333   


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ..-|++|..||.....   .+-+.++-...++.|.    .+.+.+.+.+.+....+.++++|
T Consensus        65 ~~l-----------~~adiVVitaG~~~~~---~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          65 AAL-----------ADADVVISTLGNIKLQ---QDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             GGG-----------TTCSEEEECCSCGGGT---C-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HHh-----------ccccEEEEeccccccc---cccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEec
Confidence            222           2579999999974311   1111111122344443    45567777777665566766664

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.55  E-value=0.00026  Score=57.64  Aligned_cols=79  Identities=16%  Similarity=0.276  Sum_probs=58.8

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      ..++++|+|+|.|+ ||.+++++..|.+.+.+|.++.|+.+++++..+.+...                  ..+.....|
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~------------------~~~~~~~~~   73 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY------------------GNIQAVSMD   73 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG------------------SCEEEEEGG
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc------------------cccchhhhc
Confidence            34678999999985 78899999999998899999999999988887776431                  234444444


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                      -.              .....|++||+.....
T Consensus        74 ~~--------------~~~~~diiIN~tp~g~   91 (171)
T d1p77a1          74 SI--------------PLQTYDLVINATSAGL   91 (171)
T ss_dssp             GC--------------CCSCCSEEEECCCC--
T ss_pred             cc--------------cccccceeeecccccc
Confidence            21              1246899999987643

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=0.00015  Score=58.90  Aligned_cols=50  Identities=10%  Similarity=0.134  Sum_probs=43.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELE   78 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~   78 (368)
                      ..++++|+|+|.|+ ||-+++++..|.+.|.+|.++.|+.++.+++.+.+.
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~   62 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA   62 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHh
Confidence            35778999999996 799999999999999999999999999887766554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.48  E-value=0.00018  Score=55.86  Aligned_cols=71  Identities=17%  Similarity=0.282  Sum_probs=55.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +|+|.|+ |-+|+.+++.|.++|+.|++++++++..+++.++                      ....++..|.+|++.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~----------------------~~~~vi~Gd~~~~~~l   58 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----------------------IDALVINGDCTKIKTL   58 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----------------------CSSEEEESCTTSHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh----------------------hhhhhccCcccchhhh
Confidence            6899997 8999999999999999999999999887654332                      1356788999999877


Q ss_pred             HHHHHHHHhHcCCCCEEEEc
Q 017635          115 QKLSNFAVNEFGSIDIWINN  134 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~n  134 (368)
                      +++-      ....|.++..
T Consensus        59 ~~~~------i~~a~~vv~~   72 (132)
T d1lssa_          59 EDAG------IEDADMYIAV   72 (132)
T ss_dssp             HHTT------TTTCSEEEEC
T ss_pred             hhcC------hhhhhhhccc
Confidence            6541      2357877764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.46  E-value=0.0011  Score=52.43  Aligned_cols=119  Identities=18%  Similarity=0.200  Sum_probs=74.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +-.+++|.|.|+ |.+|..+|..|+.+|  .++++.++++++++....++......             ....+.....|
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~~~~~d   68 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVF-------------APKPVDIWHGD   68 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTS-------------SSSCCEEEECC
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccc-------------cCCCeEEEECC
Confidence            345678999997 899999999999988  47999999999887777777542110             12233333444


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      .   ++           ...-|++|..||...  .+- +..    .+.+..|    ..+.+.+.+.+.+....+.++++|
T Consensus        69 ~---~~-----------l~daDvvvitag~~~--~~~-~~R----~dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          69 Y---DD-----------CRDADLVVICAGANQ--KPG-ETR----LDLVDKN----IAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             G---GG-----------TTTCSEEEECCSCCC--CTT-TCS----GGGHHHH----HHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             H---HH-----------hccceeEEEeccccc--ccC-cch----hHHHHHH----HHHHHHHHHHHHhhCCCceEEEec
Confidence            3   21           225799999999754  221 111    2223334    334455566655554567777764

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.40  E-value=0.00024  Score=57.74  Aligned_cols=41  Identities=22%  Similarity=0.297  Sum_probs=36.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      +|++|+|+||+|++|...++.+...|++|+.+++++++.+.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~   67 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL   67 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccc
Confidence            68899999999999999999888999999999998877653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.001  Score=53.62  Aligned_cols=81  Identities=16%  Similarity=0.158  Sum_probs=55.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.+ +++                    +.. +++..+-.+
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~--------------------Ga~-~~~~~~~~~   82 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI--------------------GAD-LVLQISKES   82 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT--------------------TCS-EEEECSSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh--------------------CCc-ccccccccc
Confidence            4678999986 8999999999999998 799999999887643 222                    222 233334445


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      ..+..+.++...  -..+|++|.+.|.
T Consensus        83 ~~~~~~~~~~~~--g~g~Dvvid~~G~  107 (171)
T d1pl8a2          83 PQEIARKVEGQL--GCKPEVTIECTGA  107 (171)
T ss_dssp             HHHHHHHHHHHH--TSCCSEEEECSCC
T ss_pred             cccccccccccC--CCCceEEEeccCC
Confidence            555544443321  2369999999985

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00077  Score=57.11  Aligned_cols=79  Identities=20%  Similarity=0.227  Sum_probs=55.4

Q ss_pred             CCCCCeEEEEcC----------------CChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCc
Q 017635           30 KAGPRNVVITGS----------------TRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK   93 (368)
Q Consensus        30 ~~~~k~vlITGa----------------s~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~   93 (368)
                      +|+|++||||+|                ||-+|.++|+++..+|++|.++.-.....                       
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-----------------------   59 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-----------------------   59 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-----------------------
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-----------------------
Confidence            688999999987                45899999999999999999886543210                       


Q ss_pred             ccccCceeEEEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635           94 KNLVHAKVAGIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus        94 ~~~~~~~v~~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                         ....+..+  .+...++....+.   +.+...|++|++|.+..
T Consensus        60 ---~p~~~~~~--~~~t~~~m~~~~~---~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          60 ---TPPFVKRV--DVMTALEMEAAVN---ASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             ---CCTTEEEE--ECCSHHHHHHHHH---HHGGGCSEEEECCBCCS
T ss_pred             ---cccccccc--eehhhHHHHHHHH---hhhccceeEeeeechhh
Confidence               11223333  4455555555443   33456899999999875

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.11  E-value=0.0032  Score=50.19  Aligned_cols=119  Identities=14%  Similarity=0.139  Sum_probs=73.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++...|.|.|+ |.+|..+|..|+.+|.  ++++.++++++++....+|......             .+........|
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~-------------~~~~~~~~~~d   81 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLF-------------LSTPKIVFGKD   81 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTT-------------CSCCEEEEESS
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchh-------------cCCCeEEeccc
Confidence            345557888896 8999999999999983  7999999998888777777652110             11222223334


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ..+              ...-|++|..||...  .+-  .+.+   ..++.|    ..+.+.+.+.+.+....+.++++|
T Consensus        82 ~~~--------------~~~adivvitag~~~--~~~--~~R~---dll~~N----~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          82 YNV--------------SANSKLVIITAGARM--VSG--QTRL---DLLQRN----VAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             GGG--------------GTTEEEEEECCSCCC--CTT--TCSS---CTTHHH----HHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             hhh--------------hccccEEEEeccccc--CCC--CCHH---HHHHHH----HHHHHHHHHHHhccCCCeEEEEeC
Confidence            321              135799999999754  221  1111   112223    334555666666554567777764

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.09  E-value=0.00054  Score=55.29  Aligned_cols=42  Identities=14%  Similarity=0.252  Sum_probs=36.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~   73 (368)
                      .+.+++|.|+++++|...++.+...| .+|+++++++++.+.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~   69 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA   69 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHH
Confidence            46899999999999999999999888 5899999998876543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.09  E-value=0.0047  Score=48.23  Aligned_cols=115  Identities=15%  Similarity=0.167  Sum_probs=70.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .++.|.|+ |.+|.++|..++.+|.  ++++.++++++++....++......             .+........|.   
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~-------------~~~~~i~~~~~~---   64 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSF-------------YPTVSIDGSDDP---   64 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGG-------------STTCEEEEESCG---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhcccc-------------CCCceeecCCCH---
Confidence            45777897 9999999999999984  7999999998887766666542110             111111122222   


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ..-|++|..||...  .+  ..+..   +.+..|.    .+.+...+.+.+....+.++++|
T Consensus        65 ~~~-----------~daDvVVitaG~~~--~~--g~~R~---dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          65 EIC-----------RDADMVVITAGPRQ--KP--GQSRL---ELVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             GGG-----------TTCSEEEECCCCCC--CT--TCCHH---HHHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             HHh-----------hCCcEEEEeccccc--CC--CCchh---hhhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            222           24699999999754  22  23332   3455555    34455555565554556666664

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.07  E-value=0.0048  Score=48.34  Aligned_cols=116  Identities=16%  Similarity=0.157  Sum_probs=67.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChH--HHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSE--SVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|.|+||+|.+|.++|..++.+|  .++++.++++.  +++....++.......           ....++.....+  |
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~-----------~~~~~~~~~~~~--d   68 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGT-----------RSDANIYVESDE--N   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTS-----------CCCCEEEEEETT--C
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccccc-----------ccCCccccCCcc--h
Confidence            48899999999999999999999  48999998753  4455555555422110           011233322221  2


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      .++           ...-|++|..||...  .+  ..+.   ...++.|..=    ++...+.+.+.. ...|+.+
T Consensus        69 ~~~-----------l~~aDvVVitAG~~~--~~--g~sR---~dl~~~Na~i----v~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          69 LRI-----------IDESDVVIITSGVPR--KE--GMSR---MDLAKTNAKI----VGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             GGG-----------GTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHH----HHHHHHHHHHHC-CCEEEEC
T ss_pred             HHH-----------hccceEEEEeccccc--CC--CCCh---hhhhhhhHHH----HHHHHHHHhccC-CCeEEEE
Confidence            211           235799999999753  21  2233   3355556544    444455554432 3445544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.01  E-value=0.0078  Score=47.86  Aligned_cols=120  Identities=11%  Similarity=0.086  Sum_probs=76.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      .-.+.+.|.|.|+ |.+|..+|..|+.+|.  ++++.+++++..+....++......             .+........
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~-------------~~~~~~~~~~   81 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLF-------------LQTPKIVADK   81 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG-------------CCCSEEEECS
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccc-------------cCCCeEEecc
Confidence            3445678888896 8999999999999994  7999999998887777777542110             1122222333


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEE
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNM  186 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~i  186 (368)
                      |..+   +           ..-|++|..||...  .+  ..+.   ...++.|.    .+.+.+.|.+.+....+.++++
T Consensus        82 d~~~---~-----------~~adiVVitAg~~~--~~--g~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivv  136 (160)
T d1i0za1          82 DYSV---T-----------ANSKIVVVTAGVRQ--QE--GESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVV  136 (160)
T ss_dssp             SGGG---G-----------TTCSEEEECCSCCC--CT--TCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEEC
T ss_pred             chhh---c-----------ccccEEEEecCCcc--cc--Ccch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEe
Confidence            3322   2           35799999999754  22  1222   22333343    4566667777765456777776


Q ss_pred             c
Q 017635          187 D  187 (368)
Q Consensus       187 s  187 (368)
                      |
T Consensus       137 t  137 (160)
T d1i0za1         137 S  137 (160)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.00024  Score=58.63  Aligned_cols=78  Identities=19%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEE-EEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVV-VASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vi-l~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +++|||+||+||+|...++-....|++++ .+++++++..++.+++                    +..   ...|..++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~--------------------gad---~vi~~~~~   87 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL--------------------GFD---AAVNYKTG   87 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS--------------------CCS---EEEETTSS
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc--------------------cce---EEeeccch
Confidence            48999999999999999988888998655 4566766655544443                    122   23355554


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +. .+.++++..  ..+|+++.+.|
T Consensus        88 ~~-~~~~~~~~~--~GvDvv~D~vG  109 (187)
T d1vj1a2          88 NV-AEQLREACP--GGVDVYFDNVG  109 (187)
T ss_dssp             CH-HHHHHHHCT--TCEEEEEESSC
T ss_pred             hH-HHHHHHHhc--cCceEEEecCC
Confidence            33 333333322  35999999887

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.99  E-value=0.00071  Score=55.22  Aligned_cols=42  Identities=21%  Similarity=0.313  Sum_probs=37.2

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      .++.++||+||+||+|...++-....|++|+.++|++++.+.
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~   71 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHH
Confidence            345689999999999999999988999999999999988653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.98  E-value=0.00071  Score=52.22  Aligned_cols=73  Identities=15%  Similarity=0.284  Sum_probs=54.3

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |.++|.|+ |-+|+.+|+.|.++|+.|++++.++++.+++.+                       .....+.+|.++++.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-----------------------~~~~~~~gd~~~~~~   56 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-----------------------YATHAVIANATEENE   56 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-----------------------TCSEEEECCTTCTTH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-----------------------hCCcceeeecccchh
Confidence            56788876 689999999999999999999999988765421                       123456789999887


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ++++-      ..+.|.+|...+
T Consensus        57 l~~a~------i~~a~~vi~~~~   73 (134)
T d2hmva1          57 LLSLG------IRNFEYVIVAIG   73 (134)
T ss_dssp             HHHHT------GGGCSEEEECCC
T ss_pred             hhccC------CccccEEEEEcC
Confidence            76541      125688876544

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.98  E-value=0.00039  Score=56.67  Aligned_cols=41  Identities=20%  Similarity=0.190  Sum_probs=34.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      +|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a   68 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA   68 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH
Confidence            4788999986 8999999999888997 799999998886544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.96  E-value=0.0029  Score=50.14  Aligned_cols=50  Identities=16%  Similarity=0.129  Sum_probs=41.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      |.-+.+++.|.|+ |.+|..+|..++..+ +++++.+.++++++....++..
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~   53 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSH   53 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHH
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhh
Confidence            3445678888997 899999999988888 5899999999888777777755

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.90  E-value=0.0098  Score=46.12  Aligned_cols=113  Identities=19%  Similarity=0.185  Sum_probs=70.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++.|.|+ |.+|..+|..++.++  .++++.++++++++....++.....-              .........|.   +
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~--------------~~~~~~~~~~~---~   63 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPF--------------TRRANIYAGDY---A   63 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGG--------------SCCCEEEECCG---G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccc--------------cccccccCCcH---H
Confidence            4566796 899999999999887  58999999998887766666543211              12223333332   2


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      ++           ..-|++|..||....    ...+.   ...+..|.    .+.+.+.+.+.+....+.++++|
T Consensus        64 ~~-----------~~adivvitag~~~~----~g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          64 DL-----------KGSDVVIVAAGVPQK----PGETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             GG-----------TTCSEEEECCCCCCC----SSCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             Hh-----------cCCCEEEEecccccC----CCcch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            22           257999999997542    12232   22344453    35566677776654566766664

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.90  E-value=0.0004  Score=56.18  Aligned_cols=42  Identities=24%  Similarity=0.325  Sum_probs=36.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      ++.+|||+||+||+|...++-....|++|+.+++++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            467899999999999999988888999999999998876543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.88  E-value=0.0033  Score=49.09  Aligned_cols=115  Identities=15%  Similarity=0.170  Sum_probs=68.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE-eccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dv~~~  111 (368)
                      |++.|.|+ |.+|.++|..|+.++ .++++.+.++++.+....++......             .+...... .-|..+ 
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~-------------~~~~~~i~~~~d~~~-   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPI-------------EGFDVRVTGTNNYAD-   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCCEEEESCGGG-
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccc-------------cCCCCEEEecCcHHH-
Confidence            56777896 899999999999887 58999999988777666666432110             01111111 222221 


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                        +           ..-|++|.+||...  .+  ..+   -.+.++.|.    .+.+...+.+.+....+.++++|
T Consensus        67 --~-----------~~advvvitag~~~--~~--~~~---r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          67 --T-----------ANSDVIVVTSGAPR--KP--GMS---REDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             --G-----------TTCSEEEECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             --h-----------cCCCEEEEeeeccC--Cc--Ccc---hhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence              1           25799999999754  11  111   223344453    46677788887765566666653

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.87  E-value=0.0088  Score=46.54  Aligned_cols=114  Identities=12%  Similarity=0.147  Sum_probs=70.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCC--hHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRS--SESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      +|.|+||+|.+|.++|..++.+|.  ++++.+.+  ++..+....++.....              ..........|.  
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--------------~~~~~~i~~~~~--   65 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--------------YDSNTRVRQGGY--   65 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--------------TTCCCEEEECCG--
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--------------ccCCceEeeCCH--
Confidence            578999999999999999999983  79999864  3444444455543211              112233333343  


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                       ++           ...-|++|..||...  .+  ..+.   .+.++.|.    .+.+...+.+.+....+.++.+|
T Consensus        66 -~~-----------~~~aDiVvitaG~~~--~~--g~~R---~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          66 -ED-----------TAGSDVVVITAGIPR--QP--GQTR---IDLAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             -GG-----------GTTCSEEEECCCCCC--CT--TCCH---HHHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             -HH-----------hhhcCEEEEeccccc--cc--CCch---hhHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence             22           125799999999743  22  1232   33455554    45667777777775566666664

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0011  Score=53.25  Aligned_cols=75  Identities=19%  Similarity=0.217  Sum_probs=53.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      .|.+|+|.|+ ||+|...++.+...|+++++++++.++.+. .+++.                    ..   ...|..+.
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~lG--------------------ad---~~i~~~~~   84 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKALG--------------------AD---EVVNSRNA   84 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHT--------------------CS---EEEETTCH
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-HhccC--------------------Cc---EEEECchh
Confidence            4789999986 899999998888899999999999887643 33331                    22   12366665


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      +...       .....+|++|.+.|..
T Consensus        85 ~~~~-------~~~~~~D~vid~~g~~  104 (168)
T d1uufa2          85 DEMA-------AHLKSFDFILNTVAAP  104 (168)
T ss_dssp             HHHH-------TTTTCEEEEEECCSSC
T ss_pred             hHHH-------HhcCCCceeeeeeecc
Confidence            5432       2224799999999853

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.85  E-value=0.0014  Score=53.08  Aligned_cols=41  Identities=12%  Similarity=0.216  Sum_probs=35.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      +|.+|+|.|+ +|+|...+..+...|+ +|+++++++++.+..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a   69 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH
Confidence            5789999999 6899999999999984 899999999887643

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.81  E-value=0.0079  Score=46.78  Aligned_cols=115  Identities=17%  Similarity=0.159  Sum_probs=67.5

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++.|+|+ |.+|..++..++..|  .++++.++++++++....++......             ..........  .|.+
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~-------------~~~~~~i~~~--~~~~   65 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPV-------------GLFDTKVTGS--NDYA   65 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHH-------------HTCCCEEEEE--SCGG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccch-------------hcccceEEec--CCHH
Confidence            3677796 899999999999998  58999999998877655555332111             0112222221  2222


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           +..-|++|..||...  .+  ..+.   ...++.|..    +.+...+.+.+....+.++++|
T Consensus        66 ~-----------~~dadvvvitag~~~--~~--g~~r---~~l~~~N~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          66 D-----------TANSDIVIITAGLPR--KP--GMTR---EDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             G-----------GTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHH----HHHHHHHHHHHHCSSCEEEECC
T ss_pred             H-----------hcCCeEEEEEEecCC--CC--CCch---HHHHHHHHH----HHHHHHHHhhccCCCeEEEEec
Confidence            2           135799999999754  11  1222   233444443    3444555555544566666664

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.75  E-value=0.0022  Score=50.13  Aligned_cols=113  Identities=20%  Similarity=0.251  Sum_probs=63.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++.|.|+ |.+|..+|..++.+|.  ++++.++++++++....++.....              ..........|   .+
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~--------------~~~~~~~~~~~---~~   64 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--------------FMGQMSLYAGD---YS   64 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--------------CTTCEEEC--C---GG
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcc--------------cCCCeeEeeCc---HH
Confidence            4566697 9999999999999883  799999998876655555543100              11122222222   22


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           ...-|++|..||...  .+  ..+   -...++.|.    .+.+.+.+.+.+....+.++++|
T Consensus        65 ~-----------~~~adivvitag~~~--~~--~~~---r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          65 D-----------VKDCDVIVVTAGANR--KP--GET---RLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             G-----------GTTCSEEEECCCC----------C---HHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECS
T ss_pred             H-----------hCCCceEEEeccccc--Cc--Ccc---hhHHhhHHH----HHHHHHHHHhhccCCCceEEEec
Confidence            1           235799999999754  21  122   234455555    44555566666544556666664

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.72  E-value=0.0072  Score=47.54  Aligned_cols=120  Identities=13%  Similarity=0.114  Sum_probs=71.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      .++.|.|+ |.+|.++|..++.++ .++++.++++++.+....++.....-             .+.+......|  +.+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~-------------~~~~~~v~~~~--~~~   67 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM-------------AYSNCKVSGSN--TYD   67 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH-------------HTCCCCEEEEC--CGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccc-------------cCCCcEEEecc--ccc
Confidence            46777895 899999999888887 58999999998877777666542110             11222222222  222


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCC-CCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPL-LQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~-~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +           ...-|++|..+|....++.. .+.+.   ...++.|.    .+.+.+.+.+.+....+.++++|
T Consensus        68 ~-----------~~~advvvitag~~~~~g~~~~~~~R---~~l~~~N~----~iv~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          68 D-----------LAGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             G-----------GTTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHH----HHHHHHHHHHHHHCTTSEEEECS
T ss_pred             c-----------cCCCcEEEEecccccCCCCCccccch---hHHHHHHH----HHHHHHHHHHHhcCCCeEEEEec
Confidence            1           23579999999975421111 11111   22344453    45566666666554566667664

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.71  E-value=0.0018  Score=51.03  Aligned_cols=43  Identities=26%  Similarity=0.320  Sum_probs=38.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ++..-|+|.|.||.|-+|..+|+.|.++|++|.+.+|+.....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            4556689999999999999999999999999999999876543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.68  E-value=0.0049  Score=49.11  Aligned_cols=40  Identities=20%  Similarity=0.220  Sum_probs=35.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      +|.+|+|.|+ |++|...++-+...|++|+++++++++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~   66 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLEL   66 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHh
Confidence            4789999886 999999999888899999999999888754

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.68  E-value=0.0033  Score=50.38  Aligned_cols=40  Identities=28%  Similarity=0.189  Sum_probs=35.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      +|.+++|.|+ |++|...++.+...|++|+++++++++++.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~   66 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRED   66 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHH
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHH
Confidence            5789999987 899999988877889999999999988764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.67  E-value=0.0055  Score=49.55  Aligned_cols=40  Identities=15%  Similarity=0.240  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~   72 (368)
                      +|.+|+|.|+ ||+|...++.+...| .+|+++++++++++.
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~   69 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK   69 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH
Confidence            5889999986 899999999999999 589999999998864

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.62  E-value=0.0047  Score=48.83  Aligned_cols=117  Identities=16%  Similarity=0.208  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC---------eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEE
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD---------RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAG  103 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~---------~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~  103 (368)
                      +-+|.|+||+|.+|..++..|+..+.         +++...++.++++....++...                .......
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~   67 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC----------------AFPLLAG   67 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT----------------TCTTEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc----------------ccccccc
Confidence            34899999999999999999998652         2333345555555554444331                1112222


Q ss_pred             EeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCcE
Q 017635          104 IACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGGH  182 (368)
Q Consensus       104 ~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g~  182 (368)
                      +...-.+.+.           +...|++|..||...  .  ...+.+   +.++.|+.    +.+.+.+.+.+. ++.+.
T Consensus        68 ~~~~~~~~~~-----------~~~advViitaG~~~--~--pg~~r~---dl~~~N~~----i~~~~~~~i~k~a~~~~~  125 (154)
T d1y7ta1          68 LEATDDPKVA-----------FKDADYALLVGAAPR--K--AGMERR---DLLQVNGK----IFTEQGRALAEVAKKDVK  125 (154)
T ss_dssp             EEEESCHHHH-----------TTTCSEEEECCCCCC--C--TTCCHH---HHHHHHHH----HHHHHHHHHHHHSCTTCE
T ss_pred             cccCCchhhh-----------cccccEEEeecCcCC--C--CCCcHH---HHHHHHHH----HHHHHHHHHHHhCCCCcE
Confidence            3322222222           236899999999854  2  233433   33454544    445555555553 23455


Q ss_pred             EEEEc
Q 017635          183 IFNMD  187 (368)
Q Consensus       183 Iv~is  187 (368)
                      |+.+|
T Consensus       126 vivvs  130 (154)
T d1y7ta1         126 VLVVG  130 (154)
T ss_dssp             EEECS
T ss_pred             EEEec
Confidence            65553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0046  Score=48.66  Aligned_cols=75  Identities=13%  Similarity=0.094  Sum_probs=58.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      +++|.|. +-+|+.++++|.++|.+|++++.++++..+..++...                   ..+.++..|.+|++.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-------------------~~~~vi~Gd~~d~~~L   64 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-------------------DNADVIPGDSNDSSVL   64 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-------------------TTCEEEESCTTSHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-------------------CCcEEEEccCcchHHH
Confidence            6888887 5899999999999999999999998876655555432                   3577899999999877


Q ss_pred             HHHHHHHHhHcCCCCEEEEcc
Q 017635          115 QKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nA  135 (368)
                      +++-      ..+.|.+|...
T Consensus        65 ~~a~------i~~a~~vi~~~   79 (153)
T d1id1a_          65 KKAG------IDRCRAILALS   79 (153)
T ss_dssp             HHHT------TTTCSEEEECS
T ss_pred             HHhc------cccCCEEEEcc
Confidence            6542      23578888664

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.55  E-value=0.016  Score=46.65  Aligned_cols=117  Identities=10%  Similarity=0.102  Sum_probs=63.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh--HHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeE
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS--ESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVA  102 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~  102 (368)
                      +..+|.||||+|.||..++..|++...       .+.+.+.+.  +.++...-++.+-..              ...+- 
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~--------------~~~~~-   87 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY--------------PLLRE-   87 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--------------TTEEE-
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccc--------------ccccC-
Confidence            345799999999999999999997531       344555543  334444444433100              01111 


Q ss_pred             EEeccCCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcC-CCCc
Q 017635          103 GIACDVCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQ-PKGG  181 (368)
Q Consensus       103 ~~~~Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~~g  181 (368)
                      ....  ++..          +.+...|++|..+|...  .  ...+.   .+.++.|..    +.+...+.+.+. ++..
T Consensus        88 ~~~~--~~~~----------~~~~~aDvVvi~ag~~r--k--pg~tR---~Dll~~N~~----I~k~~~~~i~~~a~~~~  144 (175)
T d7mdha1          88 VSIG--IDPY----------EVFEDVDWALLIGAKPR--G--PGMER---AALLDINGQ----IFADQGKALNAVASKNV  144 (175)
T ss_dssp             EEEE--SCHH----------HHTTTCSEEEECCCCCC--C--TTCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTC
T ss_pred             cccc--ccch----------hhccCCceEEEeeccCC--C--CCCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCc
Confidence            1111  1211          22347899999999754  2  22343   345555643    445556666553 2344


Q ss_pred             EEEEE
Q 017635          182 HIFNM  186 (368)
Q Consensus       182 ~Iv~i  186 (368)
                      .|+.+
T Consensus       145 ~vlvv  149 (175)
T d7mdha1         145 KVLVV  149 (175)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            55555

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.51  E-value=0.011  Score=46.19  Aligned_cols=115  Identities=19%  Similarity=0.244  Sum_probs=66.1

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++.|+||+|.+|.++|..|+.+|.  ++++.+.++.+.+.  .++...  .             .-.....+. .   ..
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a--~Dl~~~--~-------------~~~~~~~~~-~---~~   60 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA--ADLSHI--E-------------TRATVKGYL-G---PE   60 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH--HHHTTS--S-------------SSCEEEEEE-S---GG
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh--HHHhhh--h-------------hhcCCCeEE-c---CC
Confidence            588999999999999999999884  69999988654332  233210  0             001111111 1   12


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +..+.+       ..-|++|..||...  .+  ..+.   ...++.|..-.    +.+.+.+.+....+.|+++|.
T Consensus        61 ~~~~~~-------~~aDivVitag~~~--~~--g~sR---~~ll~~N~~i~----~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          61 QLPDCL-------KGCDVVVIPAGVPR--KP--GMTR---DDLFNTNATIV----ATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             GHHHHH-------TTCSEEEECCSCCC--CT--TCCG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSS
T ss_pred             ChHHHh-------CCCCEEEECCCcCC--CC--CCCc---chHHHHHHHHH----HHHHHHHHhcCCCeEEEEecC
Confidence            222211       25799999999743  22  1222   22455555444    445555555545677777753

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.50  E-value=0.0043  Score=50.13  Aligned_cols=39  Identities=13%  Similarity=0.187  Sum_probs=33.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~   71 (368)
                      .|.+|+|.|+ ||||...++.+...|+ +|+++++++++++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~   67 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP   67 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH
Confidence            5789999975 9999999999999998 5888899988864

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.45  E-value=0.0025  Score=51.33  Aligned_cols=39  Identities=15%  Similarity=0.242  Sum_probs=32.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVR   71 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~   71 (368)
                      +|.+|+|.|+ +|+|...++.+...|+ +|+.+++++++++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~   67 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA   67 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHH
Confidence            4789999998 5999999999999996 5777777777754

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.44  E-value=0.0067  Score=45.13  Aligned_cols=39  Identities=26%  Similarity=0.420  Sum_probs=34.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ++++||+++|.|++ .+|.+-++.|++.|++|++.+....
T Consensus         8 l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           8 CQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             ECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             EEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccCC
Confidence            47899999999965 5999999999999999999987654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.40  E-value=0.0031  Score=51.11  Aligned_cols=50  Identities=26%  Similarity=0.450  Sum_probs=43.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEEN   80 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~   80 (368)
                      .++++|.|+|.|+ ||.+++++..|.+.| +|.+..|+.++.++..+++...
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            4689999999985 689999999998777 9999999999999988888664

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.40  E-value=0.016  Score=45.21  Aligned_cols=115  Identities=15%  Similarity=0.186  Sum_probs=66.3

Q ss_pred             eEEEEcCCChHHHHHHHHHHH-CC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLL-SG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~-~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++.|+|++|.+|.++|..|+. .+  .++++.+..+ ..+...-++....               ....... ..+-.+.
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~---------------~~~~~~~-~~~~~~~   64 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP---------------TAVKIKG-FSGEDAT   64 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSC---------------SSCEEEE-ECSSCCH
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCc---------------cccCCcE-EEcCCCc
Confidence            578999999999999998864 34  6899999864 4444444443310               1112222 2233344


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      ++++           .-|++|..||...  ++-  .+.   .+.++.|..    +.+...+.+.+....+.++++|.
T Consensus        65 ~~~~-----------~aDvvvitaG~~~--k~g--~~R---~dl~~~N~~----i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          65 PALE-----------GADVVLISAGVRR--KPG--MDR---SDLFNVNAG----IVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             HHHT-----------TCSEEEECCSCCC--CTT--CCG---GGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             cccC-----------CCCEEEECCCccC--CCC--cch---hhHHHHHHH----HHHHHHHHHHhhCCCcEEEEccC
Confidence            4332           4699999999854  221  222   334556644    44445555555445566666643

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.39  E-value=0.0072  Score=48.62  Aligned_cols=78  Identities=12%  Similarity=0.148  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeE-EEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRV-VVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~V-il~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      .|.+|+|.|+ |++|...++.+...|+++ +++++++++++.+ +++                    +. .+++  |..+
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~--------------------Ga-~~~i--~~~~   82 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL--------------------GA-THVI--NSKT   82 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH--------------------TC-SEEE--ETTT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc--------------------CC-eEEE--eCCC
Confidence            4789999997 899999999888889865 5667777776543 232                    11 1222  4444


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .+ +.+.+.++.  .+.+|++|.+.|.
T Consensus        83 ~~-~~~~i~~~t--~gg~D~vid~~G~  106 (174)
T d1f8fa2          83 QD-PVAAIKEIT--DGGVNFALESTGS  106 (174)
T ss_dssp             SC-HHHHHHHHT--TSCEEEEEECSCC
T ss_pred             cC-HHHHHHHHc--CCCCcEEEEcCCc
Confidence            33 333333332  2579999999885

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.38  E-value=0.0027  Score=51.05  Aligned_cols=45  Identities=22%  Similarity=0.335  Sum_probs=38.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++|.|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6789999996 8999999999999996 7999999999877665443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.36  E-value=0.0019  Score=46.57  Aligned_cols=38  Identities=26%  Similarity=0.184  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      +++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            679999999997 56899999999999999999998653

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.34  E-value=0.015  Score=46.67  Aligned_cols=98  Identities=18%  Similarity=0.097  Sum_probs=61.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCc--ccccCceeEEEeccCCCH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSK--KNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++|-|.|- |-+|..+|++|+++|++|++.+|++++.+++.++-.....    ..+....  ....-.....+...+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~----~~~a~~~~~~~~~~~~~~~ii~~~~~~   77 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTK----VLGAHSLEEMVSKLKKPRRIILLVKAG   77 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSS----CEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccccc----ccchhhhhhhhhhhcccceEEEecCch
Confidence            46778885 7899999999999999999999999988766443100000    0000000  000011223444566777


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +.+....+.+.....+=+++|...-
T Consensus        78 ~~v~~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          78 QAVDNFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHHHHHhccccCcEEEecCc
Confidence            8888888887776655577777654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0048  Score=50.72  Aligned_cols=47  Identities=21%  Similarity=0.401  Sum_probs=41.6

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHh
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL   81 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~   81 (368)
                      |+|.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+++.+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l   51 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESL   51 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHH
Confidence            78999998 679999999999999999999999998888877776543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.26  E-value=0.063  Score=41.42  Aligned_cols=114  Identities=14%  Similarity=0.192  Sum_probs=69.9

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEE-eccCCCH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG--DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGI-ACDVCEP  111 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G--~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dv~~~  111 (368)
                      ++.|.|+ |.+|.++|..++.+|  .++++.++++++++....++......             ........ .-|.   
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~-------------~~~~~~i~~~~d~---   64 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-------------IDKYPKIVGGADY---   64 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT-------------TTCCCEEEEESCG---
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccc-------------cCCCCccccCCCH---
Confidence            4667796 999999999999888  47999999998887766677543211             11111122 2232   


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~is  187 (368)
                      +++           ..-|++|..||...  .+  ..+.   .+.+..|.    .+.+...+.+.+....+.++++|
T Consensus        65 ~~~-----------~~adiVvitag~~~--~~--g~~r---~~l~~~n~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          65 SLL-----------KGSEIIVVTAGLAR--KP--GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             GGG-----------TTCSEEEECCCCCC--CS--SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HHh-----------ccccEEEEeccccC--CC--CCch---HHHHHHhh----HHHHHHHHHHHhhCCCcEEEEec
Confidence            221           25799999999754  21  2232   23333343    45566677777665566666664

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.22  E-value=0.01  Score=47.79  Aligned_cols=42  Identities=12%  Similarity=0.181  Sum_probs=36.0

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMT   73 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~   73 (368)
                      -.|.+|+|.|+ ||+|...++.+...|+ +|+++++++++++.+
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a   68 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA   68 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence            35789999996 8999999999999996 688999999887644

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.20  E-value=0.0074  Score=48.38  Aligned_cols=40  Identities=20%  Similarity=0.293  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~   72 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL   72 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHH
Confidence            4789999986 9999999998888886 67778888877654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.17  E-value=0.0071  Score=49.74  Aligned_cols=40  Identities=23%  Similarity=0.244  Sum_probs=33.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      .|.+|+|.|+ +++|...+..+...|+ +|+++++++++++.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~   65 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH   65 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHh
Confidence            4789999986 7999888888877886 78899999888754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.17  E-value=0.03  Score=45.44  Aligned_cols=47  Identities=13%  Similarity=0.255  Sum_probs=40.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHh
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENL   81 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~   81 (368)
                      |+|.|.|+ |-||..+|..|+.+|++|++.+++++.+++..+.+....
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l   51 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLL   51 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhH
Confidence            67899998 679999999999999999999999998887777665543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.028  Score=41.53  Aligned_cols=88  Identities=14%  Similarity=0.241  Sum_probs=63.1

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      +++..+.++.|.| +|=+|+-++....+.|+++++.+.+++.-.                         ....-.++..|
T Consensus         6 ~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA-------------------------~~va~~~i~~~   59 (111)
T d1kjqa2           6 ALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPA-------------------------MHVAHRSHVIN   59 (111)
T ss_dssp             TTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGG-------------------------GGGSSEEEECC
T ss_pred             CCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCch-------------------------hhcCCeEEECC
Confidence            4455667899999 557999999999999999999998765311                         00112567889


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHH
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQI  155 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~  155 (368)
                      ..|.+.+.+++...     .+|++-.         .++.++.+-++..
T Consensus        60 ~~d~~~l~~~~~~~-----~~DviT~---------E~EnI~~~~L~~l   93 (111)
T d1kjqa2          60 MLDGDALRRVVELE-----KPHYIVP---------EIEAIATDMLIQL   93 (111)
T ss_dssp             TTCHHHHHHHHHHH-----CCSEEEE---------CSSCSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhh-----CCceEEE---------EecCcCHHHHHHH
Confidence            99999999888764     6899853         2345565544443

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.07  E-value=0.028  Score=44.38  Aligned_cols=91  Identities=15%  Similarity=0.146  Sum_probs=56.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      ++.|.|. |-+|.++|+.|.+.|++|++.+|+++..+++.+.-.   ..    ............++.++.+   ..+++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~---~~----~~~~~~~~~~~~DiIilav---p~~~~   70 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL---VD----EAGQDLSLLQTAKIIFLCT---PIQLI   70 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS---CS----EEESCGGGGTTCSEEEECS---CHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc---cc----eeeeecccccccccccccC---cHhhh
Confidence            3566665 899999999999999999999999887665432100   00    0000111112344444433   35678


Q ss_pred             HHHHHHHHhHcCCCCEEEEccC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +++++++.....+=.++++.++
T Consensus        71 ~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          71 LPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             HHHHHHHGGGSCTTCEEEECCS
T ss_pred             hhhhhhhhhhcccccceeeccc
Confidence            8888888766555556665544

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.95  E-value=0.015  Score=46.10  Aligned_cols=40  Identities=25%  Similarity=0.245  Sum_probs=34.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ++.+++|.|+ |++|...++.+...|++|+++++++++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~   66 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL   66 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhh
Confidence            4788999875 899999999988999999999999988754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.94  E-value=0.0077  Score=48.42  Aligned_cols=41  Identities=17%  Similarity=0.257  Sum_probs=36.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      .|++.|.|+ |.+|.++|..|+++|++|.+.+|++++.+...
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            378999997 78999999999999999999999988766543

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.89  E-value=0.014  Score=46.72  Aligned_cols=40  Identities=13%  Similarity=0.189  Sum_probs=32.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRM   72 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~   72 (368)
                      +|.+|+|.|+ +|+|...+..+...|+ +|+.+++++++++.
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~   68 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEK   68 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHH
Confidence            5788999985 6788888888888886 68889999888754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.86  E-value=0.016  Score=47.81  Aligned_cols=45  Identities=22%  Similarity=0.262  Sum_probs=39.2

Q ss_pred             cccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           27 EHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        27 ~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      ...+++||+|+|-| -|.+|..+|+.|.+.|++|++.+.+.+++..
T Consensus        21 g~~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          21 GLGSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             TCCCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            34479999999998 6779999999999999999999998876653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.46  E-value=0.11  Score=40.45  Aligned_cols=35  Identities=17%  Similarity=0.202  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCC-------eEEEEeCCh
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGD-------RVVVASRSS   67 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~-------~Vil~~R~~   67 (368)
                      +.+|.|+||+|.+|.+++..|+..+.       .+++.+.++
T Consensus         3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            45899999999999999999987542       355665543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.40  E-value=0.33  Score=38.24  Aligned_cols=122  Identities=12%  Similarity=0.147  Sum_probs=66.4

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHC-----CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           34 RNVVITGSTRGLGKALAREFLLS-----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~-----G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .++.|.||++.-...+...++.+     +.+|++.+.++++++.....+........           ...++.. ..  
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-~~--   69 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKA-----------PDIEFAA-TT--   69 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHC-----------TTSEEEE-ES--
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhC-----------CCcceEe-cC--
Confidence            35777788664333333444432     24899999999998866555544322200           1112221 11  


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhc----------------hHHHHHHHHHHH
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNL----------------VGSILCTREAMR  172 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~----------------~g~~~l~~~~lp  172 (368)
                       |.+   +.+       ..-|++|+.+|....       ....-++.+..|+                +-.+...+.+.+
T Consensus        70 -d~~---eal-------~~AD~Vvitag~~~~-------~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~  131 (167)
T d1u8xx1          70 -DPE---EAF-------TDVDFVMAHIRVGKY-------AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILD  131 (167)
T ss_dssp             -CHH---HHH-------SSCSEEEECCCTTHH-------HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             -Chh---hcc-------CCCCEEEECCCcCCC-------CceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHH
Confidence             221   111       267999999997541       2223334444442                223455567777


Q ss_pred             HHHcCCCCcEEEEEc
Q 017635          173 VMRDQPKGGHIFNMD  187 (368)
Q Consensus       173 ~m~~~~~~g~Iv~is  187 (368)
                      .+.+....+.++++|
T Consensus       132 ~i~~~~P~A~li~~T  146 (167)
T d1u8xx1         132 YMEKYSPDAWMLNYS  146 (167)
T ss_dssp             HHHHHCTTCEEEECC
T ss_pred             HHHhhCCCeEEEEeC
Confidence            777665667777774

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.26  E-value=0.0077  Score=47.19  Aligned_cols=38  Identities=11%  Similarity=0.267  Sum_probs=33.9

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      .++++||++||.|| |.+|..-++.|++.|++|++++..
T Consensus         8 ~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           8 AHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             EECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             heeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999998 569999999999999999999754

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.14  E-value=0.049  Score=42.84  Aligned_cols=90  Identities=18%  Similarity=0.240  Sum_probs=55.3

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |-|.| .|-+|..+|+.|+++|++|++.+|++++.+++.+.-....          ......-.+...+.+=+.+.++++
T Consensus         3 IgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~----------~~~~e~~~~~d~ii~~v~~~~~v~   71 (161)
T d1vpda2           3 VGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETA----------STAKAIAEQCDVIITMLPNSPHVK   71 (161)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC----------SSHHHHHHHCSEEEECCSSHHHHH
T ss_pred             EEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhc----------ccHHHHHhCCCeEEEEcCCHHHHH
Confidence            55666 5789999999999999999999999988776543210000          000000112344555577788888


Q ss_pred             HHH---HHHHhHcCCCCEEEEccC
Q 017635          116 KLS---NFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       116 ~~~---~~i~~~~g~iD~li~nAG  136 (368)
                      .++   +.+.....+=+++|.+.-
T Consensus        72 ~v~~~~~~~~~~~~~g~iiid~sT   95 (161)
T d1vpda2          72 EVALGENGIIEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHHSTTCHHHHCCTTCEEEECSC
T ss_pred             HHHhCCcchhhccCCCCEEEECCC
Confidence            876   334444444456666543

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.13  E-value=0.027  Score=44.56  Aligned_cols=42  Identities=19%  Similarity=0.271  Sum_probs=37.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      ...+.||+++|.| .|-+|+.+|+.+...|++|+++..++-+.
T Consensus        19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          19 DVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh
Confidence            3568999999999 56899999999999999999999998553

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=94.98  E-value=0.13  Score=40.68  Aligned_cols=79  Identities=19%  Similarity=0.181  Sum_probs=57.2

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..++-+|+|.|++ --|++-++...+.|++|.+.+.+.++++++.....                    ..+.+   -..
T Consensus        29 gv~pa~V~ViGaG-vaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--------------------~~~~~---~~~   84 (168)
T d1pjca1          29 GVKPGKVVILGGG-VVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--------------------SRVEL---LYS   84 (168)
T ss_dssp             TBCCCEEEEECCS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--------------------GGSEE---EEC
T ss_pred             CCCCcEEEEECCC-hHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--------------------cccee---ehh
Confidence            3457889999964 68999999999999999999999998876544321                    12222   345


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                      +.+.+++.+.       .-|++|..+-+..
T Consensus        85 ~~~~l~~~~~-------~aDivI~aalipG  107 (168)
T d1pjca1          85 NSAEIETAVA-------EADLLIGAVLVPG  107 (168)
T ss_dssp             CHHHHHHHHH-------TCSEEEECCCCTT
T ss_pred             hhhhHHHhhc-------cCcEEEEeeecCC
Confidence            5666655544       4699999997755

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.78  E-value=0.02  Score=43.37  Aligned_cols=70  Identities=21%  Similarity=0.194  Sum_probs=50.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      |+++|.|. +.+|+.++++|  +|.+|+++..+++..+..    ..                   ..+.++..|.++++.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~----~~-------------------~~~~~i~Gd~~~~~~   54 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKV----LR-------------------SGANFVHGDPTRVSD   54 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHH----HH-------------------TTCEEEESCTTSHHH
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHH----Hh-------------------cCccccccccCCHHH
Confidence            67899986 67999999998  466788889888875533    22                   246678899999987


Q ss_pred             HHHHHHHHHhHcCCCCEEEEcc
Q 017635          114 VQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      ++++      ...+-+.+|...
T Consensus        55 L~~a------~i~~A~~vi~~~   70 (129)
T d2fy8a1          55 LEKA------NVRGARAVIVNL   70 (129)
T ss_dssp             HHHT------TCTTCSEEEECC
T ss_pred             HHHh------hhhcCcEEEEec
Confidence            7653      223567777643

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.22  E-value=0.059  Score=42.39  Aligned_cols=92  Identities=11%  Similarity=0.055  Sum_probs=54.9

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++|-|.| .|-+|.++|++|+++|++|.+.+|+.++.+.+.+.-....          ............+..-+.+.+.
T Consensus         2 ~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~----------~~~~e~~~~~diii~~v~~~~~   70 (162)
T d3cuma2           2 KQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA----------RSARDAVQGADVVISMLPASQH   70 (162)
T ss_dssp             CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC----------SSHHHHHTSCSEEEECCSCHHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhcccc----------chhhhhccccCeeeecccchhh
Confidence            4677776 5789999999999999999999999887665432210000          0000011223345555667777


Q ss_pred             HHHHHHH---HHhHcCCCCEEEEccC
Q 017635          114 VQKLSNF---AVNEFGSIDIWINNAG  136 (368)
Q Consensus       114 v~~~~~~---i~~~~g~iD~li~nAG  136 (368)
                      ++.++..   +.....+=+++|.+.-
T Consensus        71 ~~~v~~~~~~~~~~l~~g~iiid~st   96 (162)
T d3cuma2          71 VEGLYLDDDGLLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHHHSTTCHHHHSCTTCEEEECSC
T ss_pred             HHHHHhccccccccCCCCCEEEECCC
Confidence            7776543   3333333356665543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=94.17  E-value=0.21  Score=39.48  Aligned_cols=40  Identities=23%  Similarity=0.226  Sum_probs=33.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      +-|.| .|-+|.++|++|+++|++|.+.+|++++.+++.++
T Consensus         4 IGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            44454 77899999999999999999999999988776554

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.97  E-value=0.26  Score=39.99  Aligned_cols=77  Identities=26%  Similarity=0.269  Sum_probs=54.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      -+++|++||=-|+++|.   ++..++.+|+ +|+.++.++..++.+.+.++.                 .+.+..++..|
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~-----------------~~~~~~~~~~d  102 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGE-----------------FKGKFKVFIGD  102 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG-----------------GTTSEEEEESC
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHH-----------------cCCCceEEECc
Confidence            46789999999987762   2334456785 899999998877766554432                 34567788888


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      +.+.             .+++|++|.|.-..
T Consensus       103 ~~~~-------------~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         103 VSEF-------------NSRVDIVIMNPPFG  120 (201)
T ss_dssp             GGGC-------------CCCCSEEEECCCCS
T ss_pred             hhhh-------------CCcCcEEEEcCccc
Confidence            6442             35799999998653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=93.95  E-value=0.087  Score=42.98  Aligned_cols=38  Identities=16%  Similarity=0.184  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .+.||++.|.| -|.||+.+|+.+..-|++|+..++...
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            57899999999 568999999999999999999987654

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=93.92  E-value=0.09  Score=44.01  Aligned_cols=76  Identities=9%  Similarity=-0.057  Sum_probs=57.8

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..++++||=.|++.|.   ++..|+++|.+|+.++.+++-++.+.+.+..                 .+.++.++..|+.
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~-----------------~~~~v~~~~~d~~   94 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRS-----------------QGLKPRLACQDIS   94 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHH-----------------TTCCCEEECCCGG
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccc-----------------cCccceeeccchh
Confidence            4667899999999885   7889999999999999999887766555543                 3456888888886


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                      +.+           -.++.|++++.-+
T Consensus        95 ~~~-----------~~~~fD~i~~~~~  110 (246)
T d1y8ca_          95 NLN-----------INRKFDLITCCLD  110 (246)
T ss_dssp             GCC-----------CSCCEEEEEECTT
T ss_pred             hhc-----------ccccccccceeee
Confidence            532           1247899987544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.75  E-value=0.088  Score=44.00  Aligned_cols=47  Identities=21%  Similarity=0.292  Sum_probs=40.6

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVT   75 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~   75 (368)
                      .-+++||+++|-| .|.+|..+|+.|.+.|++|++.+.+...++....
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~   80 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA   80 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH
Confidence            4578999999999 6689999999999999999999999877765444

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.74  E-value=0.057  Score=42.74  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=38.7

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..++.||+++|.|.|.=+|+-++..|.++|++|.++......+.
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            34789999999999999999999999999999999887665554

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.36  E-value=0.055  Score=43.09  Aligned_cols=44  Identities=14%  Similarity=0.262  Sum_probs=39.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVR   71 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~   71 (368)
                      ..+++||+++|.|.|.=+|+-++..|+++|++|.++......+.
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            44789999999999999999999999999999999988765554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=93.31  E-value=0.041  Score=43.10  Aligned_cols=34  Identities=18%  Similarity=0.255  Sum_probs=30.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   69 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~   69 (368)
                      +|.|.|+ |.+|..++..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5788888 899999999999999999999998753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.25  E-value=0.41  Score=38.24  Aligned_cols=41  Identities=17%  Similarity=0.161  Sum_probs=35.3

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSES   69 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~   69 (368)
                      ...+.+|++.|.| .|.||+++++.+..-|++|+..++...+
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            3467899999999 6799999999999999999999987543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.05  E-value=0.079  Score=41.10  Aligned_cols=41  Identities=27%  Similarity=0.374  Sum_probs=33.4

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCC-CeEEEEeCChHHHHHHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSG-DRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G-~~Vil~~R~~~~~~~~~~~   76 (368)
                      ++.+.|+ |-+|.++++.|++.| ++|++.+|++++.+++.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3566775 899999999999888 8999999999887665443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.00  E-value=0.072  Score=43.49  Aligned_cols=72  Identities=26%  Similarity=0.351  Sum_probs=51.3

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      -++.||+||=.|+++|+   ++..++..|+ +|+.++.+++.++.+.+.                     ...+.++.+|
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N---------------------~~~~~~~~~D  100 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN---------------------CGGVNFMVAD  100 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH---------------------CTTSEEEECC
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc---------------------cccccEEEEe
Confidence            36789999999998883   3345667785 699999998766543322                     1346778889


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +.+.             .++.|++|.|.-.
T Consensus       101 ~~~l-------------~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         101 VSEI-------------SGKYDTWIMNPPF  117 (197)
T ss_dssp             GGGC-------------CCCEEEEEECCCC
T ss_pred             hhhc-------------CCcceEEEeCccc
Confidence            8542             2579999999654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=92.91  E-value=1.3  Score=34.63  Aligned_cols=123  Identities=14%  Similarity=0.079  Sum_probs=66.2

Q ss_pred             eEEEEcCCC-hHHHHHHHHHHHC----CCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           35 NVVITGSTR-GLGKALAREFLLS----GDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        35 ~vlITGas~-GIG~aia~~la~~----G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ++.|.||++ |-..++...++..    +.++++.+.++++++.....++.....             .+....+..  .+
T Consensus         4 KI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~-------------~~~~~~i~~--~t   68 (171)
T d1obba1           4 KIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEE-------------VGADLKFEK--TM   68 (171)
T ss_dssp             EEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHH-------------TTCCCEEEE--ES
T ss_pred             EEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHh-------------cCCCeEEEE--eC
Confidence            566777632 3344555556543    458999999999887766655543222             112222221  12


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHH-----------hh---------chHHHHHHHH
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVS-----------TN---------LVGSILCTRE  169 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~-----------vN---------~~g~~~l~~~  169 (368)
                      |.++   .+       ...|++|+.++.... .   ..+. +....+.           .+         ..-..-..+.
T Consensus        69 d~~e---aL-------~dad~Vv~~~~~g~~-~---~~~~-~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~  133 (171)
T d1obba1          69 NLDD---VI-------IDADFVINTAMVGGH-T---YLEK-VRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVD  133 (171)
T ss_dssp             CHHH---HH-------TTCSEEEECCCTTHH-H---HHHH-HHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHH
T ss_pred             Chhh---cc-------cCCCeEeeecccccc-c---ceee-ehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHH
Confidence            3222   22       368999999887531 0   0000 0000110           11         1236667788


Q ss_pred             HHHHHHcCCCCcEEEEEc
Q 017635          170 AMRVMRDQPKGGHIFNMD  187 (368)
Q Consensus       170 ~lp~m~~~~~~g~Iv~is  187 (368)
                      +.+.+.+....+.++++|
T Consensus       134 i~~~i~~~~p~a~~i~~T  151 (171)
T d1obba1         134 IARKIEKLSPKAWYLQAA  151 (171)
T ss_dssp             HHHHHHHHCTTCEEEECS
T ss_pred             HHHHHHHHCcCeEEEEEC
Confidence            888888765677777775

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.70  E-value=0.33  Score=39.30  Aligned_cols=76  Identities=17%  Similarity=-0.007  Sum_probs=54.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++.+||=.|++.|.   ++..|++.|++|+.++.+++.++.+.+.+..                 .+..+..+..|..+.
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~-----------------~~~~~~~~~~d~~~l   96 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKS-----------------RESNVEFIVGDARKL   96 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCCEEEECCTTSC
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcc-----------------ccccccccccccccc
Confidence            34578999999886   6678899999999999998877766555544                 234567777887763


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .          ...+..|+++++..+
T Consensus        97 ~----------~~~~~fD~I~~~~~l  112 (226)
T d1ve3a1          97 S----------FEDKTFDYVIFIDSI  112 (226)
T ss_dssp             C----------SCTTCEEEEEEESCG
T ss_pred             c----------ccCcCceEEEEecch
Confidence            2          111468999887543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=92.70  E-value=0.12  Score=40.51  Aligned_cols=39  Identities=26%  Similarity=0.335  Sum_probs=33.1

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGD--RVVVASRSSESVRMT   73 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~~~~~~~   73 (368)
                      |+++|.|. |-||.++|+.|.+.|+  +|+..+|+++.++.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a   42 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   42 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH
Confidence            57899985 8999999999999995  788899998876544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.65  E-value=0.14  Score=42.91  Aligned_cols=40  Identities=20%  Similarity=0.250  Sum_probs=33.4

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +.+-++++++|+|.| .||+|..++..|++.|. ++.++|.+
T Consensus        23 ~~Q~kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          23 DGQEALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHHHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHHHHHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            334567889999999 66899999999999996 78888863

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.65  E-value=0.94  Score=35.40  Aligned_cols=35  Identities=3%  Similarity=-0.043  Sum_probs=24.6

Q ss_pred             eEEEEcC-CChHHHHHHHHHHHCC----CeEEEEeCChHH
Q 017635           35 NVVITGS-TRGLGKALAREFLLSG----DRVVVASRSSES   69 (368)
Q Consensus        35 ~vlITGa-s~GIG~aia~~la~~G----~~Vil~~R~~~~   69 (368)
                      ++.|.|| +.|.+.+++.-++...    .++++.+.++++
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~   42 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGK   42 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGH
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccH
Confidence            4666776 5677777777666542    489999998765

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.59  E-value=0.054  Score=49.84  Aligned_cols=35  Identities=29%  Similarity=0.443  Sum_probs=30.1

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCC
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRS   66 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~   66 (368)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            45678999997 6799999999999996 78898864

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.57  E-value=0.41  Score=34.86  Aligned_cols=36  Identities=22%  Similarity=0.429  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.|.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            4689999995 58999999999999999999988643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.56  E-value=0.11  Score=38.83  Aligned_cols=37  Identities=27%  Similarity=0.368  Sum_probs=31.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +.++|+++|.| +|.+|.++|..|++.|.+|.++.|.+
T Consensus        27 ~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            34678999997 56999999999999999999998864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=92.47  E-value=0.077  Score=42.98  Aligned_cols=38  Identities=32%  Similarity=0.358  Sum_probs=32.8

Q ss_pred             CeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           34 RNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        34 k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      +++.|.||+ -.|.++|..|++.|++|.+.+|+++..++
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~   45 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRL   45 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHH
Confidence            578899965 69999999999999999999999876543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.29  E-value=0.55  Score=37.79  Aligned_cols=39  Identities=18%  Similarity=0.118  Sum_probs=34.4

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ..+.||++.|.| -|.||+++|+.+..-|++|+..++...
T Consensus        45 ~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          45 ARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             eeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            458899999998 568999999999999999999998643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.19  E-value=0.11  Score=40.30  Aligned_cols=40  Identities=13%  Similarity=0.252  Sum_probs=33.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTE   76 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~   76 (368)
                      +.|.| .|-+|.++++.|.+.|++|++.+|+.++.+++.++
T Consensus         3 Ig~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~   42 (152)
T d2ahra2           3 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ   42 (152)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccc
Confidence            45555 67899999999999999999999999887765544

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.21  Score=37.20  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +|+++|.||+ -||.++|..|++.|.+|.++.|+.
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            6899999965 799999999999999999999864

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.98  E-value=0.14  Score=38.55  Aligned_cols=73  Identities=14%  Similarity=0.248  Sum_probs=53.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEE-eCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVA-SRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPAD  113 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~-~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~  113 (368)
                      ++.|.|++|-+|+++++.+.++|++++.. +++....                         ....+   +..|++.++.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~-------------------------~~~~D---VvIDFS~p~~   53 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE-------------------------LDSPD---VVIDFSSPEA   53 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE-------------------------CSCCS---EEEECSCGGG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH-------------------------hccCC---EEEEecCHHH
Confidence            48999999999999999999999987654 4432110                         01122   4569999999


Q ss_pred             HHHHHHHHHhHcCCCCEEEEccCC
Q 017635          114 VQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       114 v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +.+.++.+.+.  ++-+|+-..|.
T Consensus        54 ~~~~l~~~~~~--~~p~ViGTTG~   75 (128)
T d1vm6a3          54 LPKTVDLCKKY--RAGLVLGTTAL   75 (128)
T ss_dssp             HHHHHHHHHHH--TCEEEECCCSC
T ss_pred             HHHHHHHHHhc--CCCEEEEcCCC
Confidence            99999988776  56777766654

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.16  Score=43.93  Aligned_cols=24  Identities=29%  Similarity=0.349  Sum_probs=21.3

Q ss_pred             ChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           43 RGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        43 ~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      |-.|.++|+.|..+|++|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            479999999999999999998653

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=91.94  E-value=0.17  Score=39.68  Aligned_cols=42  Identities=24%  Similarity=0.230  Sum_probs=37.4

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHH
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESV   70 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~   70 (368)
                      +..+.||+++|.| =|-+|+.+|++|...|++|+++..++-+.
T Consensus        18 ~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~a   59 (163)
T d1v8ba1          18 DFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICA   59 (163)
T ss_dssp             CCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred             CceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhh
Confidence            4578999999999 56899999999999999999999998653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=91.92  E-value=0.42  Score=40.32  Aligned_cols=74  Identities=14%  Similarity=0.113  Sum_probs=53.1

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      ..+|++||=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+.                 .+....++..|+.
T Consensus       118 ~~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~-----------------n~~~~~~~~~d~~  177 (254)
T d2nxca1         118 LRPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKR-----------------NGVRPRFLEGSLE  177 (254)
T ss_dssp             CCTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHH-----------------TTCCCEEEESCHH
T ss_pred             cCccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHH-----------------cCCceeEEecccc
Confidence            4578999999999986   3345678899999999999988877766554                 2344566666642


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEc
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINN  134 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~n  134 (368)
                      +      .     ...++.|+++.|
T Consensus       178 ~------~-----~~~~~fD~V~an  191 (254)
T d2nxca1         178 A------A-----LPFGPFDLLVAN  191 (254)
T ss_dssp             H------H-----GGGCCEEEEEEE
T ss_pred             c------c-----ccccccchhhhc
Confidence            1      1     123579999977

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.76  E-value=0.56  Score=34.34  Aligned_cols=37  Identities=19%  Similarity=0.259  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +-.++.++|.|| |-||.++|..|++.|.+|.++.|+.
T Consensus        19 ~~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          19 QNVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SSCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            335689999995 5899999999999999999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.63  E-value=0.27  Score=39.48  Aligned_cols=39  Identities=13%  Similarity=0.076  Sum_probs=34.2

Q ss_pred             ccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           28 HCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ...+.++++.|.| .|.||+++++.|..-|.+|+..+|..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            3467899999999 56899999999999999999999864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.60  E-value=0.43  Score=35.22  Aligned_cols=35  Identities=20%  Similarity=0.328  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      .+|+++|.|| |-||.++|..|++.|.+|.++.|++
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            3689999995 5899999999999999999998854

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.59  E-value=0.15  Score=37.94  Aligned_cols=36  Identities=19%  Similarity=0.233  Sum_probs=31.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ++|+++|.| +|-+|.++|..|+++|.+|.++.|.+.
T Consensus        29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence            468899988 469999999999999999999998753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=91.53  E-value=0.14  Score=40.99  Aligned_cols=37  Identities=22%  Similarity=0.287  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ..++|+|+|.|| |--|.+.|..|+++|++|.+..++.
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            356899999995 5789999999999999999999864

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=91.32  E-value=0.15  Score=42.23  Aligned_cols=35  Identities=26%  Similarity=0.286  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ..|.|+|.|| |-.|.++|.+|+++|++|.++.|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4468999995 5789999999999999999999863

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.32  E-value=0.46  Score=34.83  Aligned_cols=34  Identities=18%  Similarity=0.175  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +|+++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            688999985 5899999999999999999999853

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.24  E-value=0.25  Score=40.77  Aligned_cols=43  Identities=19%  Similarity=0.073  Sum_probs=35.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      ++++||..|++.|   ..+..|+++|++|+.++-+++.++.+.++.
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            5789999999887   458889999999999999998876655543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.23  E-value=0.38  Score=35.54  Aligned_cols=34  Identities=24%  Similarity=0.187  Sum_probs=30.2

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      .+|.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            4678999985 589999999999999999999886

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.22  E-value=0.14  Score=40.71  Aligned_cols=38  Identities=13%  Similarity=0.181  Sum_probs=35.1

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      .+++||+++|.|-|.=+|+=+|..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            37899999999999999999999999999999988754

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.19  E-value=0.11  Score=40.19  Aligned_cols=36  Identities=25%  Similarity=0.305  Sum_probs=29.1

Q ss_pred             CCeEEE-EcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           33 PRNVVI-TGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        33 ~k~vlI-TGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ++.++| -.+++-||.++|..|+++|.+|.++.+...
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            444444 456788999999999999999999998753

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=91.17  E-value=0.64  Score=36.97  Aligned_cols=43  Identities=14%  Similarity=0.091  Sum_probs=35.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTV   74 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~   74 (368)
                      .++-+|+|.||+ -.|.+-++.....|++|.+.+.+.++++++.
T Consensus        27 V~pa~VvViGaG-vaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~   69 (183)
T d1l7da1          27 VPPARVLVFGVG-VAGLQAIATAKRLGAVVMATDVRAATKEQVE   69 (183)
T ss_dssp             ECCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred             cCCcEEEEEcCc-HHHHHHHHHHHHcCCEEEEEeccHHHHHHHH
Confidence            346689999964 6899999999999999999999998876543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.14  E-value=1.4  Score=35.01  Aligned_cols=38  Identities=18%  Similarity=0.076  Sum_probs=33.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ..+.++++.|.| -|.||+.+|+.+..-|++|+..++..
T Consensus        40 ~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          40 FEARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccceEEEEee-cccchhhhhhhcccccceEeeccccc
Confidence            467899999997 67899999999999999999999864

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.11  E-value=0.15  Score=38.83  Aligned_cols=76  Identities=14%  Similarity=0.241  Sum_probs=51.2

Q ss_pred             eEEEEcCCChHHHHHHHHHHHC-CCeEEE-EeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           35 NVVITGSTRGLGKALAREFLLS-GDRVVV-ASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~-G~~Vil-~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +|.|.|++|-+|+++++...+. +++++. +++... +.    .+..                 .+.+   +..|++.++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~-----------------~~~D---vvIDFS~p~   55 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTD-----------------GNTE---VVIDFTHPD   55 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHT-----------------TTCS---EEEECCCTT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhcc-----------------ccCC---EEEEcccHH
Confidence            4789999999999999987765 466554 344321 11    1111                 1122   467999999


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .+.+.++.+.+.  ++-+|+-..|.
T Consensus        56 ~~~~~~~~~~~~--~~~~ViGTTG~   78 (135)
T d1yl7a1          56 VVMGNLEFLIDN--GIHAVVGTTGF   78 (135)
T ss_dssp             THHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHHhc--CCCEEEecccc
Confidence            999999888765  57777755553

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=90.76  E-value=1.4  Score=38.17  Aligned_cols=82  Identities=15%  Similarity=0.038  Sum_probs=54.3

Q ss_pred             CCCCeEEEEcCCC-hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           31 AGPRNVVITGSTR-GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        31 ~~~k~vlITGas~-GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+|++||=.++.. |++.+    ++..+.+|+.++.++..++.+.+.++.+.                -.++.++..|..
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ng----------------l~~~~~i~~d~~  203 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNG----------------LGNVRVLEANAF  203 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTT----------------CTTEEEEESCHH
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcC----------------CCCcceeeccHH
Confidence            4788999777754 44433    34456799999999998887776665421                135777888865


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      +.      .+.......+.|++|.++...
T Consensus       204 ~~------~~~~~~~~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         204 DL------LRRLEKEGERFDLVVLDPPAF  226 (318)
T ss_dssp             HH------HHHHHHTTCCEEEEEECCCCS
T ss_pred             HH------hhhhHhhhcCCCEEEEcCCcc
Confidence            42      222333345799999987543

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.64  E-value=0.41  Score=39.63  Aligned_cols=76  Identities=22%  Similarity=0.104  Sum_probs=55.8

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ...++++||=.|++.|   .++..|+++|++|+.++.+++-++.+.+.+++                 .+.++.++..|+
T Consensus        38 ~~~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~-----------------~~~~i~~~~~d~   97 (251)
T d1wzna1          38 AKREVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKE-----------------RNLKIEFLQGDV   97 (251)
T ss_dssp             CSSCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-----------------TTCCCEEEESCG
T ss_pred             cCCCCCEEEEeCCCCC---ccchhhcccceEEEEEeecccccccccccccc-----------------ccccchheehhh
Confidence            3446789999999987   45677899999999999998777666665544                 334688899998


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      .+..-           -+..|.+++.-
T Consensus        98 ~~l~~-----------~~~fD~I~~~~  113 (251)
T d1wzna1          98 LEIAF-----------KNEFDAVTMFF  113 (251)
T ss_dssp             GGCCC-----------CSCEEEEEECS
T ss_pred             hhccc-----------ccccchHhhhh
Confidence            66420           13689888753

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=90.52  E-value=3.1  Score=33.02  Aligned_cols=143  Identities=10%  Similarity=0.106  Sum_probs=76.6

Q ss_pred             CCCCeEEEEcCC--ChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           31 AGPRNVVITGST--RGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        31 ~~~k~vlITGas--~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ..++++++....  .....+++..|.++|..++.+.-+.+                                        
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~----------------------------------------   62 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR----------------------------------------   62 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT----------------------------------------
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc----------------------------------------
Confidence            345545554332  34777788888888888776543321                                        


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      .+.+.+   .+ .....+.++.+|+-.+.... . ....+.      ....+...+.++|.+..    .+...++.+++.
T Consensus        63 ~~~~~l---~~-~~~~~~~~~~vv~l~~~~~~-~-~~~~~~------~~~~~~~~l~l~qal~~----~~~~~~l~~vT~  126 (209)
T d2fr1a2          63 CGRDEL---AE-RLRSVGEVAGVLSLLAVDEA-E-PEEAPL------ALASLADTLSLVQAMVS----AELGCPLWTVTE  126 (209)
T ss_dssp             CCHHHH---HH-HHTTSCCCSEEEECTTTTCC-C-CSSCGG------GCHHHHHHHHHHHHHHH----TTCCCCEEEEEE
T ss_pred             cCHHHH---HH-HhhccCCCCeEEEeCCCCCC-C-CcchhH------HHHHHHHHHHHHHHHHh----CCCCCcEEEEEc
Confidence            122222   22 22444678999988765431 1 111111      11123444555565432    223456666654


Q ss_pred             CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 017635          189 AGSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  231 (368)
Q Consensus       189 ~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~  231 (368)
                      ..  ....+....-....+++-+|.|+++.|+....+++..+.
T Consensus       127 ~a--~~~~~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         127 SA--VATGPFERVRNAAHGALWGVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             SC--SCSSTTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEEC
T ss_pred             CC--cccCCCcccCCHhHHhHHHHHHHHHHhCCCceEEEEECC
Confidence            31  111222233345778899999999999986545555553

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.36  E-value=0.2  Score=36.75  Aligned_cols=35  Identities=17%  Similarity=0.156  Sum_probs=30.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      -+|+++|.| +|-+|.++|..|.+.|.+|.++.|.+
T Consensus        20 ~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence            357888888 46899999999999999999998864

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.04  E-value=1.2  Score=38.71  Aligned_cols=118  Identities=11%  Similarity=0.090  Sum_probs=70.1

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGST-RGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas-~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|++||=.|+. |+++.+    ++..|+ +|+.++.+++.++.+.+.++.+.               ...++.++..|+.
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ng---------------l~~~~~~~~~d~~  205 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNG---------------VEDRMKFIVGSAF  205 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTT---------------CGGGEEEEESCHH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcC---------------CCccceeeechhh
Confidence            47889988775 455544    345675 79999999998887776665431               1246777887764


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDG  188 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS  188 (368)
                      +      ..........+.|++|.++-....       +..+.....    .....+.+.+++.++   .+|.++..|.
T Consensus       206 ~------~~~~~~~~~~~fD~Vi~DpP~~~~-------~~~~~~~~~----~~y~~l~~~a~~ll~---pGG~lv~~s~  264 (324)
T d2as0a2         206 E------EMEKLQKKGEKFDIVVLDPPAFVQ-------HEKDLKAGL----RAYFNVNFAGLNLVK---DGGILVTCSC  264 (324)
T ss_dssp             H------HHHHHHHTTCCEEEEEECCCCSCS-------SGGGHHHHH----HHHHHHHHHHHTTEE---EEEEEEEEEC
T ss_pred             h------hhHHHHhccCCCCchhcCCccccC-------CHHHHHHHH----HHHHHHHHHHHHHcC---CCcEEEEEeC
Confidence            2      223333444679999998765331       111112111    123345556666654   4677777653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.93  E-value=0.62  Score=37.51  Aligned_cols=37  Identities=22%  Similarity=0.239  Sum_probs=31.5

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMT   73 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~   73 (368)
                      |.|.| .|-+|..+|..|+++|++|++.+.++++.+++
T Consensus         3 I~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            55555 77899999999999999999999998876654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.90  E-value=0.16  Score=37.69  Aligned_cols=34  Identities=24%  Similarity=0.315  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +|.++|.| +|-+|.++|..|++.|.+|.++.|++
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            47888888 46899999999999999999998864

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=89.68  E-value=0.6  Score=37.45  Aligned_cols=39  Identities=18%  Similarity=0.096  Sum_probs=33.9

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ..++||++.|.| -|.||+++|+.+...|.+|+..++...
T Consensus        43 ~~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          43 EKLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ceecccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            467899999999 568999999999999999999987643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=89.53  E-value=0.18  Score=42.42  Aligned_cols=34  Identities=24%  Similarity=0.277  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +|+|+|.||+ -=|.+.|.+|+++|++|.++.++.
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5889999864 678999999999999999998753

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=89.50  E-value=1.4  Score=33.24  Aligned_cols=35  Identities=11%  Similarity=0.181  Sum_probs=31.2

Q ss_pred             CCCeEEEEcCC---ChHHHHHHHHHHHCCCeEEEEeCC
Q 017635           32 GPRNVVITGST---RGLGKALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        32 ~~k~vlITGas---~GIG~aia~~la~~G~~Vil~~R~   66 (368)
                      +.|+|.|.|+|   +..|..+++.|.+.|++|+.+..+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~   55 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK   55 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCc
Confidence            46999999998   579999999999999999888764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=89.49  E-value=1.1  Score=38.04  Aligned_cols=79  Identities=24%  Similarity=0.317  Sum_probs=53.3

Q ss_pred             CeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           34 RNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        34 k~vlITGas~G-IG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ++++-.|+++| |+.+++ +  ...++|+.++.+++.++-+.+..+...               ...++.+...|+.+. 
T Consensus       112 ~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~---------------~~~~~~i~~~~~~~~-  172 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHG---------------VSDRFFVRKGEFLEP-  172 (271)
T ss_dssp             CEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTT---------------CTTSEEEEESSTTGG-
T ss_pred             cEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcC---------------CCceeEEeecccccc-
Confidence            46665666655 555544 3  356899999999998887766655421               224677788888653 


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                              ..+.++++|++|.|.-+..
T Consensus       173 --------~~~~~~~fDlIVsNPPYI~  191 (271)
T d1nv8a_         173 --------FKEKFASIEMILSNPPYVK  191 (271)
T ss_dssp             --------GGGGTTTCCEEEECCCCBC
T ss_pred             --------cccccCcccEEEEcccccC
Confidence                    2334578999999987654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=89.42  E-value=0.26  Score=36.13  Aligned_cols=35  Identities=23%  Similarity=0.265  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      .+|.++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccc
Confidence            478999998 56899999999999999999999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.41  E-value=0.71  Score=37.57  Aligned_cols=80  Identities=18%  Similarity=0.136  Sum_probs=55.9

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|.+||-.|+++|--.++..++.....+|+.++.+++.++.+.+.++..                .-.++.++..|..+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~----------------~~~n~~~~~~d~~~~  138 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL----------------GIENVIFVCGDGYYG  138 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEESCGGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhh----------------cccccccccCchHHc
Confidence            4679999999888766665555556679999999998888777776542                123566667775431


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      .          ...++.|.++.+++.
T Consensus       139 ~----------~~~~~fD~I~~~~~~  154 (213)
T d1dl5a1         139 V----------PEFSPYDVIFVTVGV  154 (213)
T ss_dssp             C----------GGGCCEEEEEECSBB
T ss_pred             c----------ccccchhhhhhhccH
Confidence            1          122579999988875

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.32  E-value=0.19  Score=39.91  Aligned_cols=36  Identities=8%  Similarity=0.058  Sum_probs=30.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCe-EEEEeCChH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDR-VVVASRSSE   68 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~-Vil~~R~~~   68 (368)
                      .+|+|+|.|| |-.|...|..|+++|++ |.+..|+..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3688999995 58999999999999985 989988653

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.23  E-value=1.2  Score=35.13  Aligned_cols=77  Identities=22%  Similarity=0.213  Sum_probs=54.3

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++.+||=.|+++|   .++..+++.+.+|+.++.+++.++.+.+.+++..               ...++.++.+|..+ 
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~g---------------l~~~v~~~~gda~~-   93 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHG---------------LGDNVTLMEGDAPE-   93 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTT---------------CCTTEEEEESCHHH-
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcC---------------CCcceEEEECchhh-
Confidence            5788998998877   3344566778899999999999888877776521               12468888887421 


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG  136 (368)
                               ........|.++.+.+
T Consensus        94 ---------~~~~~~~~D~v~~~~~  109 (186)
T d1l3ia_          94 ---------ALCKIPDIDIAVVGGS  109 (186)
T ss_dssp             ---------HHTTSCCEEEEEESCC
T ss_pred             ---------cccccCCcCEEEEeCc
Confidence                     2223457899987654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.17  E-value=0.62  Score=40.23  Aligned_cols=77  Identities=16%  Similarity=0.113  Sum_probs=52.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      .+++|+||-.|++.|+   ++..+++.|+ +|+.++.++.. ..+.+...+..               ...++.++..|+
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~---------------~~~~i~~~~~~~   93 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNK---------------LEDTITLIKGKI   93 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTT---------------CTTTEEEEESCT
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhC---------------CCccceEEEeeH
Confidence            4689999999999886   5667778896 79999988653 33333333211               235788899988


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      .+...          ...+.|+++..-
T Consensus        94 ~~l~~----------~~~~~D~Ivse~  110 (311)
T d2fyta1          94 EEVHL----------PVEKVDVIISEW  110 (311)
T ss_dssp             TTSCC----------SCSCEEEEEECC
T ss_pred             HHhcC----------ccccceEEEEee
Confidence            76421          124789998753

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=89.13  E-value=0.29  Score=39.09  Aligned_cols=38  Identities=18%  Similarity=0.229  Sum_probs=33.9

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      .+.||++.|.|.+ .||+.+++.+..-|++|+..+|+..
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEeccc-cccccceeeeecccccccccccccc
Confidence            4889999999965 5999999999999999999998753

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=89.05  E-value=0.24  Score=39.20  Aligned_cols=44  Identities=20%  Similarity=0.040  Sum_probs=36.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTEL   77 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l   77 (368)
                      .+|++||..|++.|   ..+..|+++|++|+.++.++..++.+.+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            36789999999888   477799999999999999998887765554

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.00  E-value=0.28  Score=35.80  Aligned_cols=35  Identities=23%  Similarity=0.345  Sum_probs=30.5

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      .+|+++|.| +|-+|.++|..|++.|.+|.++.|.+
T Consensus        20 ~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            368888888 56899999999999999999998853

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.39  E-value=0.22  Score=39.62  Aligned_cols=33  Identities=24%  Similarity=0.356  Sum_probs=28.7

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      +|.|.|+ |-.|.++|..|++.|++|.+.+|+.+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            5678885 68999999999999999999999654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.37  E-value=0.35  Score=36.35  Aligned_cols=35  Identities=14%  Similarity=0.225  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ++|+++|.| +|-+|.++|..|++.|.+|.++.+..
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecc
Confidence            468899998 56999999999999999999998864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.30  E-value=0.21  Score=37.10  Aligned_cols=36  Identities=25%  Similarity=0.362  Sum_probs=31.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      -+|.++|.|| |-||.++|..|.+.|.+|.++.|++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            3689999995 58999999999999999999988653

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.18  E-value=0.91  Score=37.07  Aligned_cols=79  Identities=24%  Similarity=0.223  Sum_probs=58.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      ++.+||..|+++|--.++.-++.  |.+|+.+.++++-.+...+.+++.                .-.++.++..|..+-
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~----------------g~~nv~~~~gd~~~g  139 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERA----------------GVKNVHVILGDGSKG  139 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEESCGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHc----------------CCceeEEEECccccC
Confidence            46799999999998888887776  567999999987777666666552                225788889987641


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                                ....++.|.++.+++..
T Consensus       140 ----------~~~~~pfD~Iiv~~a~~  156 (215)
T d1jg1a_         140 ----------FPPKAPYDVIIVTAGAP  156 (215)
T ss_dssp             ----------CGGGCCEEEEEECSBBS
T ss_pred             ----------CcccCcceeEEeecccc
Confidence                      12236899999888764

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.18  E-value=0.3  Score=37.48  Aligned_cols=36  Identities=19%  Similarity=0.224  Sum_probs=29.4

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRM   72 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~   72 (368)
                      |-|.| .|-+|.++|+.|+++|++|++.+|+.++...
T Consensus         3 IgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            45555 5899999999999999999999887765543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.06  E-value=0.21  Score=40.63  Aligned_cols=39  Identities=21%  Similarity=0.267  Sum_probs=34.0

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChH
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~   68 (368)
                      ..+.+|++.|.| .|.||+++|+.+..-|++|+..++...
T Consensus        41 ~~l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeee-cccccccccccccccceeeeccCCccc
Confidence            357899999999 567999999999999999999998643

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=87.85  E-value=1.9  Score=32.78  Aligned_cols=78  Identities=10%  Similarity=0.063  Sum_probs=51.9

Q ss_pred             CCCCCeEEEEcCCCh-HHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEecc
Q 017635           30 KAGPRNVVITGSTRG-LGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACD  107 (368)
Q Consensus        30 ~~~~k~vlITGas~G-IG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D  107 (368)
                      .++|++||=.|+++| +|.    +++.+|+ +|+.++.+++..+.+.+.++...               ...++.+++.|
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~---------------~~~~~~ii~~D   72 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTK---------------AENRFTLLKME   72 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTT---------------CGGGEEEECSC
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcc---------------cccchhhhccc
Confidence            468999998887655 554    4567886 79999999887776655554321               23568888888


Q ss_pred             CCCHHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635          108 VCEPADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       108 v~~~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      ..+      +++   ...++.|+++.++
T Consensus        73 ~~~------~l~---~~~~~fDiIf~DP   91 (152)
T d2esra1          73 AER------AID---CLTGRFDLVFLDP   91 (152)
T ss_dssp             HHH------HHH---HBCSCEEEEEECC
T ss_pred             ccc------ccc---ccccccceeEech
Confidence            532      222   2235789998764

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=87.79  E-value=0.23  Score=42.41  Aligned_cols=35  Identities=31%  Similarity=0.395  Sum_probs=30.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ++|+|+|.||+ --|...|.+|+++|++|+++.++.
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            56899999965 669999999999999999998764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=87.44  E-value=1.6  Score=33.21  Aligned_cols=88  Identities=14%  Similarity=0.111  Sum_probs=53.6

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHHH
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADVQ  115 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v~  115 (368)
                      |-+.|- |-+|..+|++|++.|+.+ +..|+.++.++..++.....         ....  .-.+...+...+.+.+.+.
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~~~i~~~~~~~~v~   69 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEA---------VPLE--RVAEARVIFTCLPTTREVY   69 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEE---------CCGG--GGGGCSEEEECCSSHHHHH
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcc---------cccc--cccceeEEEecccchhhhh
Confidence            556664 789999999999988755 57888877665554431100         0000  1112333445566778888


Q ss_pred             HHHHHHHhHcCCCCEEEEccC
Q 017635          116 KLSNFAVNEFGSIDIWINNAG  136 (368)
Q Consensus       116 ~~~~~i~~~~g~iD~li~nAG  136 (368)
                      ...+.+.....+-.++|.+.-
T Consensus        70 ~~~~~l~~~~~~~~~iid~sT   90 (156)
T d2cvza2          70 EVAEALYPYLREGTYWVDATS   90 (156)
T ss_dssp             HHHHHHTTTCCTTEEEEECSC
T ss_pred             hhhcccccccccccccccccc
Confidence            888777665555556665543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=87.36  E-value=3.2  Score=35.64  Aligned_cols=82  Identities=15%  Similarity=0.043  Sum_probs=54.6

Q ss_pred             CCCeEEEEcCCCh-HHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCC
Q 017635           32 GPRNVVITGSTRG-LGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCE  110 (368)
Q Consensus        32 ~~k~vlITGas~G-IG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~  110 (368)
                      ++++||=..+.+| ++.    .+++.|++|+.++.+...++.+.+.++.+..              ...++.++..|+. 
T Consensus       132 ~~~rVLdlf~~tG~~sl----~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~--------------~~~~~~~i~~D~~-  192 (309)
T d2igta1         132 RPLKVLNLFGYTGVASL----VAAAAGAEVTHVDASKKAIGWAKENQVLAGL--------------EQAPIRWICEDAM-  192 (309)
T ss_dssp             SCCEEEEETCTTCHHHH----HHHHTTCEEEEECSCHHHHHHHHHHHHHHTC--------------TTSCEEEECSCHH-
T ss_pred             CCCeEEEecCCCcHHHH----HHHhCCCeEEEEeChHHHHHHHHHhhhhhcc--------------cCCcEEEEeCCHH-
Confidence            5788886666544 443    3456799999999999888777666544211              2246788887764 


Q ss_pred             HHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          111 PADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       111 ~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                           ++++...++-.+.|++|.+.-.
T Consensus       193 -----~~l~~~~~~~~~fD~IilDPP~  214 (309)
T d2igta1         193 -----KFIQREERRGSTYDIILTDPPK  214 (309)
T ss_dssp             -----HHHHHHHHHTCCBSEEEECCCS
T ss_pred             -----HhHHHHhhcCCCCCEEEECCCc
Confidence                 3344444454679999998643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=86.97  E-value=0.39  Score=39.77  Aligned_cols=35  Identities=23%  Similarity=0.181  Sum_probs=30.0

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ..++|+|.||+ --|..+|..|+++|.+|+++.|+.
T Consensus         3 ~~~kV~IiGaG-~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGS-ISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45789999964 678999999999999999999864

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=86.80  E-value=0.27  Score=35.41  Aligned_cols=41  Identities=15%  Similarity=0.113  Sum_probs=34.0

Q ss_pred             ccccCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           26 EEHCKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        26 ~~~~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      ....+++||+|+|.|++ --|..+|..|++.+.++++..|+.
T Consensus        25 ~~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          25 REPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CCGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             cchhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            45567899999999965 678999999999988888777764

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.53  E-value=0.19  Score=42.57  Aligned_cols=41  Identities=15%  Similarity=0.187  Sum_probs=34.5

Q ss_pred             ccCCCCCeEEEEcCCChHHHHH-----HHHHHHCCCeEEEEeCChH
Q 017635           28 HCKAGPRNVVITGSTRGLGKAL-----AREFLLSGDRVVVASRSSE   68 (368)
Q Consensus        28 ~~~~~~k~vlITGas~GIG~ai-----a~~la~~G~~Vil~~R~~~   68 (368)
                      .+.-.++.++|+.|-||.|+.+     |..|+++|.+|.+++-++.
T Consensus        14 ~~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          14 DIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             HhhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3445678888888899999986     7999999999999998854

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.06  E-value=1.8  Score=34.15  Aligned_cols=78  Identities=12%  Similarity=0.016  Sum_probs=53.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      .+++.+||=.|++.|.   .+..|+++|++|+.++.+++.++.+.+..++.                .-..+.+...|+.
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~----------------~~~~~~~~~~d~~   88 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAE----------------GLDNLQTDLVDLN   88 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------TCTTEEEEECCTT
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc----------------cccchhhhheecc
Confidence            3456789999997654   56788999999999999998887665554431                1124667777876


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      +..-           -+..|+++.+.-.
T Consensus        89 ~~~~-----------~~~fD~I~~~~~~  105 (198)
T d2i6ga1          89 TLTF-----------DGEYDFILSTVVM  105 (198)
T ss_dssp             TCCC-----------CCCEEEEEEESCG
T ss_pred             cccc-----------cccccEEEEeeee
Confidence            5431           1468999876543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=85.99  E-value=0.35  Score=40.50  Aligned_cols=31  Identities=16%  Similarity=0.235  Sum_probs=27.8

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      |+|.|| |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788884 5899999999999999999999864

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=85.80  E-value=3.6  Score=31.81  Aligned_cols=46  Identities=15%  Similarity=0.156  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHH
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEE   79 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~   79 (368)
                      .+|++||=.|+++|.   ++.+++.+|++|+.++.+++..+.+.+.++.
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~   85 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRR   85 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHh
Confidence            356778866665552   3345667899999999999888777666554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.42  E-value=0.59  Score=34.65  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=31.4

Q ss_pred             CCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           31 AGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        31 ~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      -.+|.++|.|| |-||.++|..|.+.|.+|.++.|..
T Consensus        24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            34689999995 6899999999999999999998754

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.41  E-value=0.7  Score=38.34  Aligned_cols=35  Identities=23%  Similarity=0.252  Sum_probs=30.2

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHH-CCCeEEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLL-SGDRVVVAS   64 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~-~G~~Vil~~   64 (368)
                      .++++++++|-| .|-+|..+|+.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            478999999997 78999999999975 599988765

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.37  E-value=0.57  Score=40.22  Aligned_cols=35  Identities=17%  Similarity=0.210  Sum_probs=31.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS   64 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~   64 (368)
                      .+++||+|+|-|- |-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            4789999999995 7999999999999999998775

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.30  E-value=0.39  Score=40.57  Aligned_cols=35  Identities=17%  Similarity=0.178  Sum_probs=31.7

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS   64 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~   64 (368)
                      .+++||+++|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            478999999999 68899999999999999988764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.91  E-value=1.1  Score=32.48  Aligned_cols=35  Identities=23%  Similarity=0.309  Sum_probs=27.6

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH---CCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLL---SGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~---~G~~Vil~~R~~   67 (368)
                      .+|.++|.|| |.+|.++|..|.+   +|.+|.++.|.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            4689999996 7999999966554   456899998754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=84.77  E-value=0.59  Score=39.06  Aligned_cols=35  Identities=23%  Similarity=0.249  Sum_probs=31.6

Q ss_pred             cCCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEe
Q 017635           29 CKAGPRNVVITGSTRGLGKALAREFLLSGDRVVVAS   64 (368)
Q Consensus        29 ~~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~   64 (368)
                      .+++||+|+|-| .|-+|..+|+.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            378999999998 77899999999999999998765

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=84.60  E-value=1.7  Score=35.03  Aligned_cols=76  Identities=16%  Similarity=0.107  Sum_probs=54.1

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      +++||=.|++.|.-   +..|+++|++|+.++-+++-++.+.+.+...                ...++.++..|..+..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~----------------~~~~i~~~~~d~~~l~   76 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGN----------------GHQQVEYVQGDAEQMP   76 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHT----------------TCCSEEEEECCC-CCC
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccc----------------cccccccccccccccc
Confidence            57899999988843   4677889999999999988777655544432                2356888899887642


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          113 DVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                       .         ..+..|+++++..+
T Consensus        77 -~---------~~~~fD~v~~~~~l   91 (231)
T d1vl5a_          77 -F---------TDERFHIVTCRIAA   91 (231)
T ss_dssp             -S---------CTTCEEEEEEESCG
T ss_pred             -c---------cccccccccccccc
Confidence             0         11478999887665

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=84.55  E-value=0.26  Score=39.71  Aligned_cols=31  Identities=23%  Similarity=0.323  Sum_probs=27.5

Q ss_pred             CeEEEEcCCChHHHH-----HHHHHHHCCCeEEEEe
Q 017635           34 RNVVITGSTRGLGKA-----LAREFLLSGDRVVVAS   64 (368)
Q Consensus        34 k~vlITGas~GIG~a-----ia~~la~~G~~Vil~~   64 (368)
                      |++.|||-++|.|+.     +|+.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999998899975     6888999999999986

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.53  E-value=1.7  Score=35.42  Aligned_cols=86  Identities=15%  Similarity=0.055  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|.+||-.|+++|--.++.-++.....+|+.++++++-++.+.+.+++......           ....+.+...|..+.
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~-----------~~~~~~~~~gD~~~~  144 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-----------SSGRVQLVVGDGRMG  144 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-----------HTSSEEEEESCGGGC
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccc-----------cccceEEEEeecccc
Confidence            467999999999988888888887788999999999888877777654321100           123566677776421


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                                ....++.|.++.+++..
T Consensus       145 ----------~~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         145 ----------YAEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             ----------CGGGCCEEEEEECSBBS
T ss_pred             ----------cchhhhhhhhhhhcchh
Confidence                      11235799999988763

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=84.48  E-value=0.56  Score=40.67  Aligned_cols=35  Identities=17%  Similarity=0.378  Sum_probs=29.8

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      +.|.|+|.||+ --|..+|.+|+++|++|.++.++.
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            46899999954 678999999999999999998764

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=84.30  E-value=11  Score=32.04  Aligned_cols=147  Identities=14%  Similarity=0.108  Sum_probs=81.5

Q ss_pred             CCCeEEEEcCC-ChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCC
Q 017635           32 GPRNVVITGST-RGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVC  109 (368)
Q Consensus        32 ~~k~vlITGas-~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~  109 (368)
                      +|++||=..+. ||++.    +++..|+ +|+.++.++..++.+.+.++.+.-              ...++.++..|+-
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l--------------~~~~~~~i~~d~~  205 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHL--------------DMANHQLVVMDVF  205 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTC--------------CCTTEEEEESCHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcc--------------cCcceEEEEccHH
Confidence            58899877765 45443    3456786 699999999888777666654211              1246788888863


Q ss_pred             CHHHHHHHHHHHHhHcCCCCEEEEccCCCCCCCCCCCCCHHHHHHHHHhhchHHHHHHHHHHHHHHcCCCCcEEEEEcCC
Q 017635          110 EPADVQKLSNFAVNEFGSIDIWINNAGTNKGFKPLLQFTNEEIEQIVSTNLVGSILCTREAMRVMRDQPKGGHIFNMDGA  189 (368)
Q Consensus       110 ~~~~v~~~~~~i~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~~g~Iv~isS~  189 (368)
                            +.++...++..+.|++|..+-.... ..-...+..          .....+.+.+++.++   .+|.+++.|-+
T Consensus       206 ------~~l~~~~~~~~~fD~Ii~DPP~f~~-~~~~~~~~~----------~~~~~L~~~a~~ll~---pgG~l~~~scs  265 (317)
T d2b78a2         206 ------DYFKYARRHHLTYDIIIIDPPSFAR-NKKEVFSVS----------KDYHKLIRQGLEILS---ENGLIIASTNA  265 (317)
T ss_dssp             ------HHHHHHHHTTCCEEEEEECCCCC------CCCCHH----------HHHHHHHHHHHHTEE---EEEEEEEEECC
T ss_pred             ------HHHHHHHhhcCCCCEEEEcChhhcc-chhHHHHHH----------HHHHHHHHHHHHHcC---CCCEEEEEeCC
Confidence                  2333344444579999998653321 111111111          123345666666664   35666654322


Q ss_pred             CCCCCCCCCchhhHHHHHHHHHHHHHHHHHhCCCCeEEEEEe
Q 017635          190 GSGGSSTPLTAVYGSTKCGLRQLQASLFKESKRSKVGVHTAS  231 (368)
Q Consensus       190 ~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~~~~gI~v~~v~  231 (368)
                        ..        ..     .+.|.+.+...+...+.++..+.
T Consensus       266 --~~--------~~-----~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         266 --AN--------MT-----VSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             --TT--------SC-----HHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             --cc--------CC-----HHHHHHHHHHHHHHcCCeEEEec
Confidence              11        11     23445555555566677776664

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=84.20  E-value=0.56  Score=36.10  Aligned_cols=35  Identities=23%  Similarity=0.312  Sum_probs=29.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCC--eEEEEeCCh
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGD--RVVVASRSS   67 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~--~Vil~~R~~   67 (368)
                      .||+|+|.||+ -.|.++|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGgG-~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGG-TGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECcc-HHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            48999999965 689999999999884  788888764

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=84.15  E-value=0.97  Score=36.17  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=58.8

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHHHH
Q 017635           35 NVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPADV  114 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~v  114 (368)
                      .+=+|-|+||.-+++.+.+ . +.+|+.++++++.++.+.+.++.                 .+.++.++..+..+...+
T Consensus        27 ~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~-----------------~~~r~~~~~~~f~~~~~~   87 (192)
T d1m6ya2          27 ILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKE-----------------FSDRVSLFKVSYREADFL   87 (192)
T ss_dssp             EEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGG-----------------GTTTEEEEECCGGGHHHH
T ss_pred             EEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcc-----------------ccccccchhHHHhhHHHH
Confidence            3337888899999998886 3 47899999999988776665543                 345788999998875443


Q ss_pred             HHHHHHHHhHcCCCCEEEEccCCCC
Q 017635          115 QKLSNFAVNEFGSIDIWINNAGTNK  139 (368)
Q Consensus       115 ~~~~~~i~~~~g~iD~li~nAG~~~  139 (368)
                         .+..  ..+++|.++...|+..
T Consensus        88 ---~~~~--~~~~vdgIl~DlGvSs  107 (192)
T d1m6ya2          88 ---LKTL--GIEKVDGILMDLGVST  107 (192)
T ss_dssp             ---HHHT--TCSCEEEEEEECSCCH
T ss_pred             ---HHHc--CCCCcceeeeccchhH
Confidence               2211  1358999999998753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=83.91  E-value=3.5  Score=29.61  Aligned_cols=81  Identities=11%  Similarity=0.056  Sum_probs=53.4

Q ss_pred             CCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCHH
Q 017635           33 PRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEPA  112 (368)
Q Consensus        33 ~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~  112 (368)
                      ||+|||.=-..-+-..+...|.+.|++|+..+.+.+..   .+.+++.                 ..++...-.++-+.+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~-----------------~~dliilD~~mp~~~   60 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKEL-----------------KPDIVTMDITMPEMN   60 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHH-----------------CCSEEEEECSCGGGC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhc-----------------cCCEEEEecCCCCCC
Confidence            78999999899999999999999999998766665443   3333331                 134444444444443


Q ss_pred             HHHHHHHHHHhHcCCCCEEEEc
Q 017635          113 DVQKLSNFAVNEFGSIDIWINN  134 (368)
Q Consensus       113 ~v~~~~~~i~~~~g~iD~li~n  134 (368)
                      . -++++++.+....+-+++..
T Consensus        61 G-~e~~~~ir~~~~~~pvi~ls   81 (118)
T d1u0sy_          61 G-IDAIKEIMKIDPNAKIIVCS   81 (118)
T ss_dssp             H-HHHHHHHHHHCTTCCEEEEE
T ss_pred             H-HHHHHHHHHhCCCCcEEEEE
Confidence            3 35566676776777777664

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=83.60  E-value=0.77  Score=37.60  Aligned_cols=37  Identities=24%  Similarity=0.327  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      .-.+|.|+|.||+ --|...|.+|+++|++|.++.++.
T Consensus        46 ~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            3467999999965 679999999999999999998754

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=83.52  E-value=1.1  Score=31.53  Aligned_cols=38  Identities=16%  Similarity=0.228  Sum_probs=29.6

Q ss_pred             CCCCeEEEEcCCChHH-HHHHHHHHHCCCeEEEEeCChHH
Q 017635           31 AGPRNVVITGSTRGLG-KALAREFLLSGDRVVVASRSSES   69 (368)
Q Consensus        31 ~~~k~vlITGas~GIG-~aia~~la~~G~~Vil~~R~~~~   69 (368)
                      -+.|++.+.|-+ |+| .++|+.|.++|++|...|+....
T Consensus         6 ~~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~   44 (96)
T d1p3da1           6 RRVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGV   44 (96)
T ss_dssp             TTCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSH
T ss_pred             hhCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCCh
Confidence            356788888853 555 56799999999999999987543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.92  E-value=1.8  Score=37.27  Aligned_cols=77  Identities=23%  Similarity=0.146  Sum_probs=51.3

Q ss_pred             CCCCCeEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           30 KAGPRNVVITGSTRGLGKALAREFLLSGD-RVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        30 ~~~~k~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ..+||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+..+.+.               ...++.++..|+
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~---------------~~~~v~~~~~~~   91 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANK---------------LDHVVTIIKGKV   91 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTT---------------CTTTEEEEESCT
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhC---------------CccccceEeccH
Confidence            3478999999999885   5567778886 6888987753 443333333211               235688889888


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEcc
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      .+.+.          ...++|+++..-
T Consensus        92 ~~~~~----------~~~~~D~ivs~~  108 (316)
T d1oria_          92 EEVEL----------PVEKVDIIISEW  108 (316)
T ss_dssp             TTCCC----------SSSCEEEEEECC
T ss_pred             HHccc----------ccceeEEEeeee
Confidence            77431          124789998754

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=82.70  E-value=0.66  Score=39.84  Aligned_cols=32  Identities=19%  Similarity=0.371  Sum_probs=24.4

Q ss_pred             CeEEEEcCCChHHH-----HHHHHHHHCCCeEEEEeCC
Q 017635           34 RNVVITGSTRGLGK-----ALAREFLLSGDRVVVASRS   66 (368)
Q Consensus        34 k~vlITGas~GIG~-----aia~~la~~G~~Vil~~R~   66 (368)
                      |+|+|++|+.| |-     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56777776555 65     6899999999999877643

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.39  E-value=7.1  Score=29.72  Aligned_cols=39  Identities=18%  Similarity=0.231  Sum_probs=24.2

Q ss_pred             eEEEEcCCChHHHHHHHH-HH-HC----CCeEEEEeCChHHHHHHH
Q 017635           35 NVVITGSTRGLGKALARE-FL-LS----GDRVVVASRSSESVRMTV   74 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~-la-~~----G~~Vil~~R~~~~~~~~~   74 (368)
                      ++.|.||++ .|...+-. ++ ..    +.++++.+.++++++...
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~   46 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV   46 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH
Confidence            467788754 44444422 22 21    358999999999877543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.05  E-value=0.68  Score=37.16  Aligned_cols=31  Identities=19%  Similarity=0.279  Sum_probs=27.2

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      |+|.| +|--|...|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            78888 55779999999999999999998864

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=81.88  E-value=3.5  Score=30.68  Aligned_cols=90  Identities=11%  Similarity=0.063  Sum_probs=52.7

Q ss_pred             CCCeEEEEcCCC---hHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccC
Q 017635           32 GPRNVVITGSTR---GLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDV  108 (368)
Q Consensus        32 ~~k~vlITGas~---GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv  108 (368)
                      ++|++.|.|+|.   -.|..+.+.|.+.|++++.+.-+....     ++..       .... .........+..+.+ .
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~-----~i~g-------~~~~-~~l~~i~~~iD~v~v-~   77 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE-----ELFG-------EEAV-ASLLDLKEPVDILDV-F   77 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS-----EETT-------EECB-SSGGGCCSCCSEEEE-C
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccc-----eeec-------eecc-cchhhccCCCceEEE-e
Confidence            468999999984   699999999999999998876443210     0000       0000 000001112222211 3


Q ss_pred             CCHHHHHHHHHHHHhHcCCCCEEEEccCC
Q 017635          109 CEPADVQKLSNFAVNEFGSIDIWINNAGT  137 (368)
Q Consensus       109 ~~~~~v~~~~~~i~~~~g~iD~li~nAG~  137 (368)
                      ..++.+..+++++.+.  .+..++...|.
T Consensus        78 ~p~~~v~~~v~~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          78 RPPSALMDHLPEVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             SCHHHHTTTHHHHHHH--CCSCEEECTTC
T ss_pred             ccHHHHHHHHHHHHhh--CCCeEEEecCc
Confidence            3577788888887665  36667777775

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=81.39  E-value=0.7  Score=38.70  Aligned_cols=31  Identities=16%  Similarity=0.355  Sum_probs=26.9

Q ss_pred             EEEEcCCChHHHHHHHHHHHCCCeEEEEeCCh
Q 017635           36 VVITGSTRGLGKALAREFLLSGDRVVVASRSS   67 (368)
Q Consensus        36 vlITGas~GIG~aia~~la~~G~~Vil~~R~~   67 (368)
                      |+|.|| |-.|..+|.+|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            778874 5789999999999999999998753

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=80.76  E-value=3.7  Score=33.33  Aligned_cols=86  Identities=15%  Similarity=0.112  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHH-CC----CeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEec
Q 017635           32 GPRNVVITGSTRGLGKALAREFLL-SG----DRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIAC  106 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~-~G----~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  106 (368)
                      ++.+||..|+++|--.++.-+++. .|    .+|+.+.++++-.+...+.+........           .-.++.++..
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~-----------~~~nv~~~~~  148 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSML-----------DSGQLLIVEG  148 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHH-----------HHTSEEEEES
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhc-----------CccEEEEEec
Confidence            468999999999988887777764 44    4899999998877766655543211100           1136788888


Q ss_pred             cCCCHHHHHHHHHHHHhHcCCCCEEEEccCCC
Q 017635          107 DVCEPADVQKLSNFAVNEFGSIDIWINNAGTN  138 (368)
Q Consensus       107 Dv~~~~~v~~~~~~i~~~~g~iD~li~nAG~~  138 (368)
                      |..+.          ....++.|.++.+++..
T Consensus       149 d~~~~----------~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         149 DGRKG----------YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             CGGGC----------CGGGCSEEEEEECSCBS
T ss_pred             ccccc----------cccccceeeEEEEeech
Confidence            87531          12346799999988763

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.38  E-value=4.1  Score=31.02  Aligned_cols=85  Identities=16%  Similarity=0.195  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHHHhhhhhhhcCCCCcccccCceeEEEeccCCCH
Q 017635           32 GPRNVVITGSTRGLGKALAREFLLSGDRVVVASRSSESVRMTVTELEENLKEGMMAAGGSSKKNLVHAKVAGIACDVCEP  111 (368)
Q Consensus        32 ~~k~vlITGas~GIG~aia~~la~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~  111 (368)
                      +|+++.|.+.|||.|--++-.+.+.|.++.-  -+++    +.++|++..+...           ...+-.-+..+ .+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~--l~~~----t~~~L~~~lp~~~-----------~~~NPlD~~~~-~~~   63 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLAT--LEEK----TIEELRSFLPPMA-----------AVKNPVDMIAS-ARG   63 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECC--CCHH----HHHHHHHHSCTTC-----------EESSEEECCTT-CCH
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCC--CCHH----HHHHHHHhCCCcc-----------cCCCcccccCC-CCH
Confidence            6888999999999999999999999976633  2333    3344444332110           00111111223 356


Q ss_pred             HHHHHHHHHHHhHcCCCCEEEEcc
Q 017635          112 ADVQKLSNFAVNEFGSIDIWINNA  135 (368)
Q Consensus       112 ~~v~~~~~~i~~~~g~iD~li~nA  135 (368)
                      +...++++.+.+. +.+|.++...
T Consensus        64 ~~~~~~l~~~~~d-~~vd~v~v~~   86 (163)
T d2csua3          64 EDYYRTAKLLLQD-PNVDMLIAIC   86 (163)
T ss_dssp             HHHHHHHHHHHHS-TTCSEEEEEE
T ss_pred             HHHHHHHHHHHcC-CCcCEEEEee
Confidence            7777777766554 6799776543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.26  E-value=0.82  Score=38.77  Aligned_cols=32  Identities=28%  Similarity=0.443  Sum_probs=27.0

Q ss_pred             eEEEEcCCChHHHHHHHHHHHCCC-eEEEEeCCh
Q 017635           35 NVVITGSTRGLGKALAREFLLSGD-RVVVASRSS   67 (368)
Q Consensus        35 ~vlITGas~GIG~aia~~la~~G~-~Vil~~R~~   67 (368)
                      .|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4788885 4899999999999996 599998864