Query 017637
Match_columns 368
No_of_seqs 252 out of 1917
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:39:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4.1E-85 1.4E-89 638.4 29.2 336 17-356 3-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 1.8E-80 6.1E-85 597.0 21.0 298 60-363 3-307 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.6E-77 5.4E-82 575.5 25.6 287 60-349 6-308 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 3.4E-74 1.2E-78 551.8 18.3 275 60-351 4-306 (311)
5 1odm_A Isopenicillin N synthas 100.0 3.7E-73 1.3E-77 549.3 25.4 280 60-351 8-325 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.1E-68 3.9E-73 506.2 23.3 257 60-350 3-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.5 0.053 1.8E-06 49.2 9.0 104 191-312 75-194 (243)
8 2rg4_A Uncharacterized protein 94.0 0.78 2.7E-05 40.5 12.7 43 261-315 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 91.6 0.56 1.9E-05 42.4 8.3 183 79-312 16-212 (247)
10 2jig_A Prolyl-4 hydroxylase; h 86.2 2.1 7.1E-05 37.7 7.8 88 216-313 99-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 84.0 3.4 0.00012 36.4 8.0 104 190-312 94-211 (216)
12 3i3q_A Alpha-ketoglutarate-dep 81.7 8.4 0.00029 33.7 9.6 80 215-311 105-201 (211)
13 3s57_A Alpha-ketoglutarate-dep 81.4 5.1 0.00018 34.8 8.1 81 215-310 100-200 (204)
14 2iuw_A Alkylated repair protei 80.2 6.2 0.00021 35.2 8.4 85 215-312 126-229 (238)
15 3tht_A Alkylated DNA repair pr 63.6 10 0.00036 35.8 5.9 107 214-329 197-328 (345)
16 2dbn_A Hypothetical protein YB 43.0 12 0.0004 36.7 2.6 52 60-116 100-151 (461)
17 3rcq_A Aspartyl/asparaginyl be 42.8 66 0.0023 27.6 7.1 67 233-316 114-187 (197)
18 3o2g_A Gamma-butyrobetaine dio 38.0 11 0.00039 35.9 1.6 52 60-117 122-173 (388)
19 4ay7_A Methylcobalamin\: coenz 35.7 71 0.0024 29.6 6.8 39 78-116 306-348 (348)
20 3kt7_A PKHD-type hydroxylase T 35.3 81 0.0028 32.0 7.3 84 217-315 126-231 (633)
21 1e5r_A Proline oxidase; oxidor 32.3 53 0.0018 30.1 5.0 65 233-311 103-175 (290)
22 2da7_A Zinc finger homeobox pr 31.8 17 0.0006 26.0 1.3 42 171-212 14-55 (71)
23 1otj_A Alpha-ketoglutarate-dep 28.5 65 0.0022 28.7 5.0 50 60-116 17-66 (283)
24 2opi_A L-fuculose-1-phosphate 28.2 36 0.0012 29.3 3.1 36 60-99 125-160 (212)
25 2p17_A Pirin-like protein; GK1 27.6 62 0.0021 29.3 4.7 22 227-248 47-68 (277)
26 1m3u_A 3-methyl-2-oxobutanoate 25.5 1.9E+02 0.0066 25.9 7.5 85 82-186 166-253 (264)
27 2vf9_A Coat protein; virion, R 24.5 20 0.00068 27.0 0.5 17 281-297 49-65 (131)
28 3ghf_A Septum site-determining 23.8 61 0.0021 25.4 3.4 36 63-102 51-86 (120)
29 1oih_A Putative alkylsulfatase 23.2 94 0.0032 28.0 5.1 51 60-117 27-78 (301)
30 2fk5_A Fuculose-1-phosphate al 23.1 58 0.002 27.8 3.4 36 60-99 117-153 (200)
31 2x4k_A 4-oxalocrotonate tautom 22.9 61 0.0021 21.1 2.9 23 183-205 18-40 (63)
32 2ww6_A Fibritin, T4 fibritin; 22.7 73 0.0025 18.1 2.5 14 254-267 11-24 (27)
33 3pvj_A Alpha-ketoglutarate-dep 22.2 81 0.0028 28.3 4.4 51 60-117 15-65 (277)
34 1e4c_P L-fuculose 1-phosphate 22.1 55 0.0019 28.2 3.1 36 60-99 122-157 (215)
35 3abf_A 4-oxalocrotonate tautom 21.5 82 0.0028 20.8 3.3 23 183-205 16-38 (64)
36 3r1j_A Alpha-ketoglutarate-dep 21.2 1.2E+02 0.0041 27.6 5.4 51 60-117 21-72 (301)
37 3nrl_A Uncharacterized protein 21.1 23 0.00078 25.9 0.3 18 275-292 31-48 (81)
38 1m5a_B Insulin B chain; alpha 20.6 89 0.0031 18.3 2.7 16 78-93 11-26 (30)
39 2do1_A Nuclear protein HCC-1; 20.5 88 0.003 21.0 3.1 33 78-113 14-46 (55)
40 1pvt_A Sugar-phosphate aldolas 20.2 71 0.0024 27.9 3.5 36 60-99 161-196 (238)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4.1e-85 Score=638.38 Aligned_cols=336 Identities=29% Similarity=0.592 Sum_probs=298.1
Q ss_pred CCccHHHHHhcCCCCCCCCCCccCCCCCCCCCCC---CCCCCCCCCCCceeeCCCCCCCCch--HHHHHHHHHHhHhccE
Q 017637 17 SIPSVQELMIKNPDKLTVPQCFLRADQEPPNFSN---GGTHHFPSIPVPTIDLECLLSEEDT--NSQLDNLRAICKEWGI 91 (368)
Q Consensus 17 ~~~~v~~l~~~~~~~~~vp~~~~~~~~~~~~~~~---~~~~~~~~~~iPvIDls~l~~~d~~--~~~~~~l~~A~~~~GF 91 (368)
++++||+|+++|+. +||++|++|.++++.... ........ +||||||+.+.+++.. .+++++|.+||++|||
T Consensus 3 ~~~~v~~l~~~~~~--~vP~~~~~p~~~~~~~~~~~~~~~~~~~~-~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GF 79 (356)
T 1gp6_A 3 AVERVESLAKSGII--SIPKEYIRPKEELESINDVFLEEKKEDGP-QVPTIDLKNIESDDEKIRENCIEELKKASLDWGV 79 (356)
T ss_dssp CCCCHHHHHHTTCS--SCCGGGSCCHHHHTTCCCHHHHHHCCCSC-CCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSE
T ss_pred CcccHHHHHhcCCC--CCCHHhcCCchhcccccccccccccccCC-CCCEEEchhccCCChHHHHHHHHHHHHHHHhCCE
Confidence 56789999999987 999999999888875321 00000013 6999999998765542 2356999999999999
Q ss_pred EEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhccCCC--CCcccccc--cCCCCCccCcccccccccCCCccccCCCCC
Q 017637 92 FQLVNHGIGSSLLEKLKHDMVEFYKLPIEEKMRYQRKP--GDAEGYGS--VAGSDGILDWGDRFYTVTNPLHQRKSHLFP 167 (368)
Q Consensus 92 F~v~nHGI~~~li~~~~~~~~~FF~lP~eeK~~~~~~~--~~~~GY~~--~~~~~~~~d~~e~~~~~~~p~~~~~~~~wP 167 (368)
|||+||||+.++++++++.+++||+||.|+|+++.... ..++||+. .....+..||+|.|++...|.....+|.||
T Consensus 80 F~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP 159 (356)
T 1gp6_A 80 MHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 159 (356)
T ss_dssp EEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCC
Confidence 99999999999999999999999999999999998754 36889987 223456789999999887665445678999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhc---cccceeeeeecCCCCCCCCccccccccCCceEE
Q 017637 168 ELPPSLRKTLESYVQELQKLSMELLGAMGKALKMDAKEMEEMFE---DGRQSVRMAYYPPCPTPGQVMGLAPHSDASGIT 244 (368)
Q Consensus 168 ~~~~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~---~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~~lT 244 (368)
+.+++||+++++|+++|.+|+.+||++|+++||+++++|.+.+. ...+.||+||||||++++..+|+++|||+|+||
T Consensus 160 ~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT 239 (356)
T 1gp6_A 160 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT 239 (356)
T ss_dssp CSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence 99999999999999999999999999999999999999999987 467889999999999999999999999999999
Q ss_pred EEEecCCCCCeEEEeCCeEEEcccCCCeEEEEeccccccccCCeecCccceeecCCCCCceEEEeeecCCCCc-eeecCC
Q 017637 245 ILHQVNGVDGLEIKKDGVWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRATVNSVKERISIAFFVSPKFDA-QVGPAT 323 (368)
Q Consensus 245 lL~q~~~v~GLQV~~~g~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~pl~ 323 (368)
||+| |+++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||++|+.++|||++||++|+.|+ +|+|++
T Consensus 240 lL~q-d~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~ 318 (356)
T 1gp6_A 240 FILH-NMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLP 318 (356)
T ss_dssp EEEE-CSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCG
T ss_pred EEEE-cCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCCh
Confidence 9999 67999999999999999999999999999999999999999999999999889999999999999999 999999
Q ss_pred ccCCCCCCCCCCcccHHHHHHHHHhccCCCCcc
Q 017637 324 SLISPENPPLFIRVGMEEFVKTFFSHKLNEKSY 356 (368)
Q Consensus 324 ~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~ 356 (368)
+++++++|++|+++||+||++.+++++++|+..
T Consensus 319 ~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 319 EMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp GGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred hhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 999999999999999999999999888777643
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.8e-80 Score=596.97 Aligned_cols=298 Identities=29% Similarity=0.568 Sum_probs=264.6
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhccCCCCCcccccccC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKLPIEEKMRYQRKPGDAEGYGSVA 139 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~ 139 (368)
+||||||+.+.. .....++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..||+...
T Consensus 3 ~iPvIDls~l~~-~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~---~~Gy~~~~ 78 (319)
T 1w9y_A 3 NFPIISLDKVNG-VERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA---SKALEGVQ 78 (319)
T ss_dssp CCCEEEGGGGGS-TTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHTTCC
T ss_pred CCCEEECcccCc-ccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC---CCCCCccc
Confidence 699999998853 22234679999999999999999999999999999999999999999999998642 34786633
Q ss_pred CCCCccCcccccccccCCCccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcc---ccce
Q 017637 140 GSDGILDWGDRFYTVTNPLHQRKSHLFPELPPSLRKTLESYVQELQKLSMELLGAMGKALKMDAKEMEEMFED---GRQS 216 (368)
Q Consensus 140 ~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~~---~~~~ 216 (368)
.+.+..||+|.|++...|. ..+|.||+.+++||+++++|+++|.+|+.+||++|+++||+++++|.+.+.. ..+.
T Consensus 79 ~e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~ 156 (319)
T 1w9y_A 79 AEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFG 156 (319)
T ss_dssp CCGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCEEE
T ss_pred ccCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCccce
Confidence 3456789999999876553 3478999999999999999999999999999999999999999999998864 4578
Q ss_pred eeeeecCCCCCCCCccccccccCCceEEEEEecCCCCCeEEEeCCeEEEcccCCCeEEEEeccccccccCCeecCcccee
Q 017637 217 VRMAYYPPCPTPGQVMGLAPHSDASGITILHQVNGVDGLEIKKDGVWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRA 296 (368)
Q Consensus 217 lrl~~YPp~~~~~~~~g~~~HtD~~~lTlL~q~~~v~GLQV~~~g~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRV 296 (368)
+|+||||||++++.++|+++|||+|+||||+||++++||||+++|+|++|+|+||+|||||||+||+||||+|||++|||
T Consensus 157 lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRV 236 (319)
T 1w9y_A 157 TKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRV 236 (319)
T ss_dssp EEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEE
T ss_pred eEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccccee
Confidence 99999999999999999999999999999999547999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceEEEeeecCCCCceeecCCccCCCC---CCCCCCcccHHHHHHHHHhccCCCCcc-ccceecc
Q 017637 297 TVNSVKERISIAFFVSPKFDAQVGPATSLISPE---NPPLFIRVGMEEFVKTFFSHKLNEKSY-LECMKID 363 (368)
Q Consensus 297 v~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~---~p~~y~~~~~~ey~~~~~~~~~~~~~~-l~~~~~~ 363 (368)
++|+.++|+|+|||++|+.|++|.|+++|++++ +|++|++++|+||++.++++.+.++.. ++.+|+-
T Consensus 237 v~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 237 IAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp CCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred cCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 999889999999999999999999999999987 599999999999999999998888754 6766654
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.6e-77 Score=575.49 Aligned_cols=287 Identities=23% Similarity=0.408 Sum_probs=254.3
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhccCCCCCccccccc-
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKLPIEEKMRYQRKPGDAEGYGSV- 138 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~- 138 (368)
+||||||+.+.+ +. .+.+++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.......+||...
T Consensus 6 ~iPvIDls~~~~-~~-~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~Gy~~~g 83 (312)
T 3oox_A 6 AIDPVSFSLYAK-DF-TRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARGYIPFG 83 (312)
T ss_dssp SSCCEETHHHHH-CH-HHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSEEECCC
T ss_pred CCCeEEChHhcc-cH-HHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcccccccc
Confidence 699999998744 22 346799999999999999999999999999999999999999999999998754557899651
Q ss_pred ---CCCCCccCcccccccccC-CC-----ccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHH
Q 017637 139 ---AGSDGILDWGDRFYTVTN-PL-----HQRKSHLFPELPPSLRKTLESYVQELQKLSMELLGAMGKALKMDAKEMEEM 209 (368)
Q Consensus 139 ---~~~~~~~d~~e~~~~~~~-p~-----~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~ 209 (368)
.......||+|.|.+... +. ....+|.||+.+|+||+++++|+++|.+|+.+||++|+++||+++++|.+.
T Consensus 84 ~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~ 163 (312)
T 3oox_A 84 VETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKPT 163 (312)
T ss_dssp CCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHHH
T ss_pred ceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 122356899999887542 11 112468999999999999999999999999999999999999999999999
Q ss_pred hccccceeeeeecCCCCCCCCccccccccCCceEEEEEecCCCCCeEEE-eCCeEEEcccCCCeEEEEeccccccccCCe
Q 017637 210 FEDGRQSVRMAYYPPCPTPGQVMGLAPHSDASGITILHQVNGVDGLEIK-KDGVWIPAHILPDALLVNVGDILEIMSNGV 288 (368)
Q Consensus 210 ~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~~lTlL~q~~~v~GLQV~-~~g~W~~V~p~~~~lvVniGD~L~~~SnG~ 288 (368)
+..+.+.+|+||||||++++..+|+++|||+|+||||+| |+++||||+ ++|+|++|+|+||++||||||+||+||||+
T Consensus 164 ~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~ 242 (312)
T 3oox_A 164 VQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLG-AEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNV 242 (312)
T ss_dssp HTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEEC-CTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTS
T ss_pred hcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeE-cCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCe
Confidence 988888999999999998766699999999999999999 689999997 489999999999999999999999999999
Q ss_pred ecCccceeecCC----CCCceEEEeeecCCCCceeecCCccCCCCCCCCCC-cccHHHHHHHHHhc
Q 017637 289 YRSVEHRATVNS----VKERISIAFFVSPKFDAQVGPATSLISPENPPLFI-RVGMEEFVKTFFSH 349 (368)
Q Consensus 289 ~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~-~~~~~ey~~~~~~~ 349 (368)
|||++|||+.++ ..+|||+|||++|+.|++|+|+++|+++++|++|+ +++++||++.+++.
T Consensus 243 ~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 243 LPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp SCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred ecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 999999998653 46799999999999999999999999999999999 99999999988874
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=3.4e-74 Score=551.82 Aligned_cols=275 Identities=20% Similarity=0.320 Sum_probs=237.2
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcCC-HHHHhhccCCC-CCcccccc
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKLP-IEEKMRYQRKP-GDAEGYGS 137 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lP-~eeK~~~~~~~-~~~~GY~~ 137 (368)
+||||||+.+.+++. . ++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++.... ...+||+.
T Consensus 4 ~iPvIDls~l~~~~~-~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 4 TVPTFSLAELQQGLH-Q---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCEEEHHHHHTTCS-H---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCcEEEchhhcCCCH-H---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 699999998865443 2 389999999999999999999999999999999999999 99999998764 56799976
Q ss_pred cC--------CCCCccCcccccccccCCCccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCC----CHHH
Q 017637 138 VA--------GSDGILDWGDRFYTVTNPLHQRKSHLFPELPPSLRKTLESYVQELQKLSMELLGAMGKALKM----DAKE 205 (368)
Q Consensus 138 ~~--------~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl----~~~~ 205 (368)
.. ...+..||+|.|++... +|.|| +++||+++++|+++|.+|+.+||++|+++||+ ++++
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~ 151 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEA 151 (311)
T ss_dssp C-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHH
T ss_pred ccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhH
Confidence 21 23467899999998753 57899 89999999999999999999999999999999 8888
Q ss_pred HHHHhccccceeeeeecCCCCCCC--C--ccccccccCCceEEEEEecCCCCC---eEEEeCCeEEEcccCCCeEEEEec
Q 017637 206 MEEMFEDGRQSVRMAYYPPCPTPG--Q--VMGLAPHSDASGITILHQVNGVDG---LEIKKDGVWIPAHILPDALLVNVG 278 (368)
Q Consensus 206 ~~~~~~~~~~~lrl~~YPp~~~~~--~--~~g~~~HtD~~~lTlL~q~~~v~G---LQV~~~g~W~~V~p~~~~lvVniG 278 (368)
|.+. .+.+|+||||||++++ . .+|+++|||+|+||||+|+++++| |||+++|+|++|+|+||+||||||
T Consensus 152 f~~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiG 227 (311)
T 1dcs_A 152 FLDC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCG 227 (311)
T ss_dssp HHSC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEEC
T ss_pred Hhhc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHH
Confidence 8765 6789999999999874 3 678999999999999999328999 999999999999999999999999
Q ss_pred cccccccCCeecCccceeecCC-----CCCceEEEeeecCCCCceeecCCccCCCCCCCCC--CcccHHHHHHHHHhccC
Q 017637 279 DILEIMSNGVYRSVEHRATVNS-----VKERISIAFFVSPKFDAQVGPATSLISPENPPLF--IRVGMEEFVKTFFSHKL 351 (368)
Q Consensus 279 D~L~~~SnG~~kS~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y--~~~~~~ey~~~~~~~~~ 351 (368)
|+||+||||+|||++|||+.++ .++||||+||++|+.|++|. +|+++++++|++| +++|++||++.++++.+
T Consensus 228 D~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999999999999987 67899999999999999999 9999999999999 99999999987766544
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.7e-73 Score=549.27 Aligned_cols=280 Identities=22% Similarity=0.329 Sum_probs=250.3
Q ss_pred CCceeeCCCCCCCCch--HHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHH-hcCCHHHHhhccCCCCCccccc
Q 017637 60 PVPTIDLECLLSEEDT--NSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEF-YKLPIEEKMRYQRKPGDAEGYG 136 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~--~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~F-F~lP~eeK~~~~~~~~~~~GY~ 136 (368)
+||||||+.|.+++.. ..++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++.. +||.
T Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~-----~Gy~ 79 (331)
T 1odm_A 8 NVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI-----RAYN 79 (331)
T ss_dssp CCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----TTTC
T ss_pred CCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----cCCC
Confidence 6999999998766542 235699999999999999999999 899999999999 9999999999986 5665
Q ss_pred cc----CCC------CCccCcccccccccCCCc----------cccCCCCCCC--chhHHHHHHHHHHHHHHHHHHHHHH
Q 017637 137 SV----AGS------DGILDWGDRFYTVTNPLH----------QRKSHLFPEL--PPSLRKTLESYVQELQKLSMELLGA 194 (368)
Q Consensus 137 ~~----~~~------~~~~d~~e~~~~~~~p~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ll~~ 194 (368)
.. ... .+..||+|.|++...+.. ...+|.||+. +|+||+++++|+++|.+|+.+||++
T Consensus 80 ~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~ 159 (331)
T 1odm_A 80 KEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKG 159 (331)
T ss_dssp TTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 41 111 157899999998753211 1347899998 9999999999999999999999999
Q ss_pred HHhhCCCCHHHHHHHhccccceee--eeecC------C---CCCCCC-ccccccccCCceEEEEEecCCCCCeEEE-eCC
Q 017637 195 MGKALKMDAKEMEEMFEDGRQSVR--MAYYP------P---CPTPGQ-VMGLAPHSDASGITILHQVNGVDGLEIK-KDG 261 (368)
Q Consensus 195 ls~~Lgl~~~~~~~~~~~~~~~lr--l~~YP------p---~~~~~~-~~g~~~HtD~~~lTlL~q~~~v~GLQV~-~~g 261 (368)
|+++||+++++|.+.++.+.+.+| +|||| | |++|+. .+|+++|||+|+||||+| |+++||||+ ++|
T Consensus 160 la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~v~GLQV~~~~g 238 (331)
T 1odm_A 160 YALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQ-SNVQNLQVETAAG 238 (331)
T ss_dssp HHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEE-CSSCCEEEEETTE
T ss_pred HHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEee-CCCCCEEEEcCCC
Confidence 999999999999999988888999 99999 8 988887 899999999999999999 689999999 578
Q ss_pred eEEEcccCCCeEEEEeccccccccCCeecCccceeecCCCCCceEEEeeecCCCCceeecCCccCCCCCCCCCCcccHHH
Q 017637 262 VWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRATVNSVKERISIAFFVSPKFDAQVGPATSLISPENPPLFIRVGMEE 341 (368)
Q Consensus 262 ~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~e 341 (368)
|++|+|+||+|||||||+||+||||+|||++|||+. +.++|+|+|||++|+.|++|+|+++++++++ ++|++++++|
T Consensus 239 -Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e 315 (331)
T 1odm_A 239 -YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGD 315 (331)
T ss_dssp -EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHH
T ss_pred -eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHH
Confidence 999999999999999999999999999999999985 5789999999999999999999999999888 8999999999
Q ss_pred HHHHHHhccC
Q 017637 342 FVKTFFSHKL 351 (368)
Q Consensus 342 y~~~~~~~~~ 351 (368)
|++.++++.+
T Consensus 316 ~l~~~~~~~~ 325 (331)
T 1odm_A 316 YLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.1e-68 Score=506.21 Aligned_cols=257 Identities=23% Similarity=0.384 Sum_probs=224.2
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhccCCCCCcccccccC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKLPIEEKMRYQRKPGDAEGYGSVA 139 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~ 139 (368)
+||||||+.. + ++++|.+||++||||||+||||+.++++++++.+++||+| |+|+++...++..+||+...
T Consensus 3 ~IPvIDls~~------~-~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~~~~GY~~~~ 73 (280)
T 3on7_A 3 KLETIDYRAA------D-SAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRETHDGFFPAS 73 (280)
T ss_dssp -CCEEETTST------T-HHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTTTCCEEECCC
T ss_pred CCCEEECCCh------h-HHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCCCCCccccCc
Confidence 6999999963 1 5789999999999999999999999999999999999998 89999987666789997621
Q ss_pred -----CCCCccCcccccccccCCCccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCH--HH---HHHH
Q 017637 140 -----GSDGILDWGDRFYTVTNPLHQRKSHLFPELPPSLRKTLESYVQELQKLSMELLGAMGKALKMDA--KE---MEEM 209 (368)
Q Consensus 140 -----~~~~~~d~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~--~~---~~~~ 209 (368)
......||+|.|.+. .||..|++||+++++|+++|.+|+.+||++||++||++. ++ |.+.
T Consensus 74 ~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~ 143 (280)
T 3on7_A 74 ISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEM 143 (280)
T ss_dssp --------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHH
T ss_pred cccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHH
Confidence 122367999988652 388889999999999999999999999999999999863 22 5666
Q ss_pred hcccc-ceeeeeecCCCCCCC--CccccccccCCceEEEEEecCCCCCeEEEe-CCeEEEcccCCCeEEEEecccccccc
Q 017637 210 FEDGR-QSVRMAYYPPCPTPG--QVMGLAPHSDASGITILHQVNGVDGLEIKK-DGVWIPAHILPDALLVNVGDILEIMS 285 (368)
Q Consensus 210 ~~~~~-~~lrl~~YPp~~~~~--~~~g~~~HtD~~~lTlL~q~~~v~GLQV~~-~g~W~~V~p~~~~lvVniGD~L~~~S 285 (368)
++.+. +.+|+||||||+.++ ..+|+++|||+|+||||+| |+++||||+. +|+|++|+|+||++||||||+||+||
T Consensus 144 ~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~q-d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 222 (280)
T 3on7_A 144 IANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPT-ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEAS 222 (280)
T ss_dssp HTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEEC-CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHT
T ss_pred hcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEe-cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHh
Confidence 66554 889999999999765 4799999999999999999 6899999995 89999999999999999999999999
Q ss_pred CCeecCccceeecCC----CCCceEEEeeecCCCCceeecCCccCCCCCCCCCCcccHHHHHHHHHhcc
Q 017637 286 NGVYRSVEHRATVNS----VKERISIAFFVSPKFDAQVGPATSLISPENPPLFIRVGMEEFVKTFFSHK 350 (368)
Q Consensus 286 nG~~kS~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~ 350 (368)
||+|||++|||+.++ ..+|||+|||++|+.|++|+| ++|++||++.+++.-
T Consensus 223 ng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 223 DGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 999999999998763 458999999999999999984 589999999988753
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.50 E-value=0.053 Score=49.19 Aligned_cols=104 Identities=13% Similarity=0.038 Sum_probs=63.4
Q ss_pred HHHHHHhhCCCCHHHHHHHhccccceeeeeecCCCCCCCCccccccccCCc-----------eEEEEEecCC----C-CC
Q 017637 191 LLGAMGKALKMDAKEMEEMFEDGRQSVRMAYYPPCPTPGQVMGLAPHSDAS-----------GITILHQVNG----V-DG 254 (368)
Q Consensus 191 ll~~ls~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~----v-~G 254 (368)
|.+.|...|+..+.++...+.....-+++++|.+-. -..+|.|.. .+|+++.-++ . |.
T Consensus 75 l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGe 148 (243)
T 3dkq_A 75 LGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGE 148 (243)
T ss_dssp HHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECC
T ss_pred HHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCce
Confidence 334444444544433332233334458888898732 256777763 4666665332 2 44
Q ss_pred eEEEeCCeEEEcccCCCeEEEEeccccccccCCeecCccceeecCCCCCceEEEeeec
Q 017637 255 LEIKKDGVWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRATVNSVKERISIAFFVS 312 (368)
Q Consensus 255 LQV~~~g~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~ 312 (368)
|.+.....=..|+|..|.+|+.-. .++|+|..-....|++++.+++
T Consensus 149 tvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 149 LVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred EEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 666665445789999999999743 3689997433468999998885
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=94.04 E-value=0.78 Score=40.54 Aligned_cols=43 Identities=16% Similarity=0.113 Sum_probs=33.4
Q ss_pred CeEEEcccCCCeEEEEeccccccccCCeecCccceeecCC-CCCceEEEeeecCCC
Q 017637 261 GVWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRATVNS-VKERISIAFFVSPKF 315 (368)
Q Consensus 261 g~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRVv~~~-~~~R~Si~~F~~P~~ 315 (368)
..+..|+|.+|.+||.-+. ..|.|..+. +++|+||+|.+.|..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 3567899999999998764 269998765 468999999998764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.64 E-value=0.56 Score=42.40 Aligned_cols=183 Identities=17% Similarity=0.161 Sum_probs=98.9
Q ss_pred HHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhccCCCCCcccccccCCCCCccCcccccccccCCC
Q 017637 79 LDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKLPIEEKMRYQRKPGDAEGYGSVAGSDGILDWGDRFYTVTNPL 158 (368)
Q Consensus 79 ~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~~~~~~~~~d~~e~~~~~~~p~ 158 (368)
...+.+++.+.|++++-|- ++.+.++.+.+.++.+-. .-.+.. + ..|-.. .....+.+..-
T Consensus 16 ~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~-----~g~~~~--a-~i~~~~---~~~~~~iR~d~------- 76 (247)
T 2hbt_A 16 LEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHD-----TGKFTD--G-QLVSQK---SDSSKDIRGDK------- 76 (247)
T ss_dssp HHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHH-----TTCSCS--C-CEEECC---SSSTTCEECCE-------
T ss_pred HHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhh-----cCCccc--c-cccccc---ccccccccccc-------
Confidence 4678899999999886665 999999999988877421 000111 0 111000 00000011000
Q ss_pred ccccCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhccccceeeeeecCCCCCCCCcccccccc
Q 017637 159 HQRKSHLFPELPPSLRKTLESYVQELQKLSMELLGAMGKALKMDAKEMEEMFEDGRQSVRMAYYPPCPTPGQVMGLAPHS 238 (368)
Q Consensus 159 ~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~Ht 238 (368)
-.|-+........+..|.+.|.++.. .+...||+.. .. +..-+.+.+|++. .-...+|.
T Consensus 77 -----i~wl~~~~~~~~~~~~l~~~i~~l~~----~ln~~lGl~~------i~-~~~e~~~~~Y~~~-----G~~y~~H~ 135 (247)
T 2hbt_A 77 -----ITWIEGKEPGCETIGLLMSSMDDLIR----HCNGKLGSYK------IN-GRTKAMVACYPGN-----GTGYVRHV 135 (247)
T ss_dssp -----EEEECSCSTTCHHHHHHHHHHHHHHH----HTTTTSTTCC------EE-EECCEEEEEECSS-----SCCEEEEC
T ss_pred -----eeeecccccchhHHHHHHHHHHHHHH----HHhhhcCccc------cc-ccceEEEEEecCC-----CCcccccc
Confidence 01111000001123334444444432 3333344320 00 1123567788751 12356777
Q ss_pred CC-----ceEEEEEecCC-------CCCeEEEeCC--eEEEcccCCCeEEEEeccccccccCCeecCccceeecCCCCCc
Q 017637 239 DA-----SGITILHQVNG-------VDGLEIKKDG--VWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRATVNSVKER 304 (368)
Q Consensus 239 D~-----~~lTlL~q~~~-------v~GLQV~~~g--~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRVv~~~~~~R 304 (368)
|. -.+|+++.-++ .|-|.++.++ ....|.|..|.+|+.-.+. -.+|.|.. ....|
T Consensus 136 D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p-~~~~R 204 (247)
T 2hbt_A 136 DNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP-AYATR 204 (247)
T ss_dssp SSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-BSSCE
T ss_pred cCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-CCCEE
Confidence 76 26888886332 3346777644 6789999999999987542 15899965 55789
Q ss_pred eEEEeeec
Q 017637 305 ISIAFFVS 312 (368)
Q Consensus 305 ~Si~~F~~ 312 (368)
+||+..+.
T Consensus 205 ~sit~W~~ 212 (247)
T 2hbt_A 205 YAITVWYF 212 (247)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEc
Confidence 99988664
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=86.22 E-value=2.1 Score=37.72 Aligned_cols=88 Identities=13% Similarity=0.146 Sum_probs=54.3
Q ss_pred eeeeeecCCCCCCCCccccccccCC--------------ceEEEEEecCC--CCC-eEEEeCC-------------eEEE
Q 017637 216 SVRMAYYPPCPTPGQVMGLAPHSDA--------------SGITILHQVNG--VDG-LEIKKDG-------------VWIP 265 (368)
Q Consensus 216 ~lrl~~YPp~~~~~~~~g~~~HtD~--------------~~lTlL~q~~~--v~G-LQV~~~g-------------~W~~ 265 (368)
-+++++|.+-. ...+|.|. ..+|+|+..++ .|| +.+...+ .-+.
T Consensus 99 ~~qv~rY~~G~------~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~ 172 (224)
T 2jig_A 99 GLQVLHYHDGQ------KYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLA 172 (224)
T ss_dssp CCEEEEEETTC------CEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEE
T ss_pred ceEEEecCCCc------cccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceE
Confidence 47777787622 24566664 35888876332 344 4332211 2478
Q ss_pred cccCCCeEEEEeccccccccCCee-cCccceeecCCCCCceEEEeeecC
Q 017637 266 AHILPDALLVNVGDILEIMSNGVY-RSVEHRATVNSVKERISIAFFVSP 313 (368)
Q Consensus 266 V~p~~~~lvVniGD~L~~~SnG~~-kS~~HRVv~~~~~~R~Si~~F~~P 313 (368)
|+|..|.+|+.-- ...||.. ..++|+|..-....|+++..+++-
T Consensus 173 V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 173 VKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp ECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred EecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999888753 2233433 578999974334579999888753
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=83.97 E-value=3.4 Score=36.42 Aligned_cols=104 Identities=11% Similarity=0.028 Sum_probs=60.8
Q ss_pred HHHHHHHhhCCCCHHHHHHHhccccceeeeeecCCCCCCCCccccccccCCc-----------eEEEEEecCC--CCCeE
Q 017637 190 ELLGAMGKALKMDAKEMEEMFEDGRQSVRMAYYPPCPTPGQVMGLAPHSDAS-----------GITILHQVNG--VDGLE 256 (368)
Q Consensus 190 ~ll~~ls~~Lgl~~~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~~-----------~lTlL~q~~~--v~GLQ 256 (368)
+|.+-|+..+|++.+ ..-.+++++|.+... ..+|.|.. .+|+|+..++ .||=-
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 334444445677531 123477777876322 45666653 4788876433 34433
Q ss_pred EEeCCeEEEcccCCCeEEEEeccccccccCCe-ecCccceeecCCCCCceEEEeeec
Q 017637 257 IKKDGVWIPAHILPDALLVNVGDILEIMSNGV-YRSVEHRATVNSVKERISIAFFVS 312 (368)
Q Consensus 257 V~~~g~W~~V~p~~~~lvVniGD~L~~~SnG~-~kS~~HRVv~~~~~~R~Si~~F~~ 312 (368)
+..+. =+.|+|..|.+|+.-. ...||. -..++|+|..-....|+++..+++
T Consensus 160 ~Fp~~-~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 160 FFPKL-NLSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp EETTT-TEEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred EecCC-CCEEecCCCeEEEEec----cCCCCCCCCccccccceeccccEEEEEeeEe
Confidence 33322 2789999999888653 112332 246799997443457999988775
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=81.67 E-value=8.4 Score=33.75 Aligned_cols=80 Identities=13% Similarity=0.125 Sum_probs=50.4
Q ss_pred ceeeeeecCCCCCCCCccccccccCC-----c--eEEEEEecCCCCCeEEEe---CCeEEEcccCCCeEEEEeccccccc
Q 017637 215 QSVRMAYYPPCPTPGQVMGLAPHSDA-----S--GITILHQVNGVDGLEIKK---DGVWIPAHILPDALLVNVGDILEIM 284 (368)
Q Consensus 215 ~~lrl~~YPp~~~~~~~~g~~~HtD~-----~--~lTlL~q~~~v~GLQV~~---~g~W~~V~p~~~~lvVniGD~L~~~ 284 (368)
..+-+|+|.+ .. ++++|.|- + ++|+=+- ...=+.+.. .+.++.+.-.+|+++|.-|+. +.|
T Consensus 105 n~~LvN~Y~~-----G~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~ 175 (211)
T 3i3q_A 105 DACLINRYAP-----GA-KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF 175 (211)
T ss_dssp CEEEEEEECT-----TC-CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC
T ss_pred CEEEEEEEcC-----CC-CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchH-Hce
Confidence 4466899987 22 78999992 2 2233332 122234432 357888999999999998877 323
Q ss_pred cCCeecCccceeecCC-------CCCceEEEeee
Q 017637 285 SNGVYRSVEHRATVNS-------VKERISIAFFV 311 (368)
Q Consensus 285 SnG~~kS~~HRVv~~~-------~~~R~Si~~F~ 311 (368)
.|.|.... ...|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 36665322 13599999864
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=81.38 E-value=5.1 Score=34.84 Aligned_cols=81 Identities=12% Similarity=0.117 Sum_probs=50.7
Q ss_pred ceeeeeecCCCCCCCCccccccccCCc--------eEEEEEecCCCCCeEEEeC----------CeEEEcccCCCeEEEE
Q 017637 215 QSVRMAYYPPCPTPGQVMGLAPHSDAS--------GITILHQVNGVDGLEIKKD----------GVWIPAHILPDALLVN 276 (368)
Q Consensus 215 ~~lrl~~YPp~~~~~~~~g~~~HtD~~--------~lTlL~q~~~v~GLQV~~~----------g~W~~V~p~~~~lvVn 276 (368)
..+-+|+|.+-. -++++|.|-. +.++=+. ...=+.+... +..+.+.-.+|+++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 445699998722 2688898862 2222222 1222334331 2578888899999999
Q ss_pred eccccccccCCeecCccceeecC--CCCCceEEEee
Q 017637 277 VGDILEIMSNGVYRSVEHRATVN--SVKERISIAFF 310 (368)
Q Consensus 277 iGD~L~~~SnG~~kS~~HRVv~~--~~~~R~Si~~F 310 (368)
-|++=..|. |.|-.. ....|+|+.|-
T Consensus 173 ~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 998766675 665432 23679999884
No 14
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=80.24 E-value=6.2 Score=35.18 Aligned_cols=85 Identities=16% Similarity=0.138 Sum_probs=53.0
Q ss_pred ceeeeeecCCCCCCCCccccccccCC--------ceEEEEEecCCCCCeEEEe-C----------CeEEEcccCCCeEEE
Q 017637 215 QSVRMAYYPPCPTPGQVMGLAPHSDA--------SGITILHQVNGVDGLEIKK-D----------GVWIPAHILPDALLV 275 (368)
Q Consensus 215 ~~lrl~~YPp~~~~~~~~g~~~HtD~--------~~lTlL~q~~~v~GLQV~~-~----------g~W~~V~p~~~~lvV 275 (368)
..+-+|+|++-. -++++|.|- .+.||=+- ...=+.+.. . +..+.+.-.+|+++|
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 456799998732 268889884 23333332 112233332 1 368899999999999
Q ss_pred EeccccccccCCeecCccceeecCCCCCceEEEeeec
Q 017637 276 NVGDILEIMSNGVYRSVEHRATVNSVKERISIAFFVS 312 (368)
Q Consensus 276 niGD~L~~~SnG~~kS~~HRVv~~~~~~R~Si~~F~~ 312 (368)
.-|++=..|.-|.-+.. .....|+|+.|=.-
T Consensus 199 M~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred EChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 99988666764332211 13468999998753
No 15
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=63.62 E-value=10 Score=35.75 Aligned_cols=107 Identities=16% Similarity=0.233 Sum_probs=66.0
Q ss_pred cceeeeeecCCCCCCCCccccccccCCc------eEEEEEecCCCCCeEEEe-CCeEEEcccCCCeEEEEeccccccccC
Q 017637 214 RQSVRMAYYPPCPTPGQVMGLAPHSDAS------GITILHQVNGVDGLEIKK-DGVWIPAHILPDALLVNVGDILEIMSN 286 (368)
Q Consensus 214 ~~~lrl~~YPp~~~~~~~~g~~~HtD~~------~lTlL~q~~~v~GLQV~~-~g~W~~V~p~~~~lvVniGD~L~~~Sn 286 (368)
...+-+|+|.+- -++++|.|-. +.|+=+- ...=+.+.. +|.++.+.-.+|+++|.-|+.=..|.-
T Consensus 197 ~n~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecCC------CCEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 345678999771 2789999984 2232221 222234443 567999999999999999998888876
Q ss_pred CeecCccceee------------------cCCCCCceEEEeeecCCCCceeecCCccCCCC
Q 017637 287 GVYRSVEHRAT------------------VNSVKERISIAFFVSPKFDAQVGPATSLISPE 329 (368)
Q Consensus 287 G~~kS~~HRVv------------------~~~~~~R~Si~~F~~P~~d~~i~pl~~~v~~~ 329 (368)
|.-+-...-+- .-....|+|+.|=.-+...+.- ..|++++..
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c~C-~~~~~cd~~ 328 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPCNC-SYPLVCDSQ 328 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCCCC-SCTTTCTTT
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCcCC-CCCCcccCC
Confidence 65443322211 0013469999998766553322 245566543
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=43.04 E-value=12 Score=36.68 Aligned_cols=52 Identities=12% Similarity=0.137 Sum_probs=40.3
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhc
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYK 116 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 116 (368)
-||.||++++.++.- -++..+.+++.|++.|.|. ||.+...+..+...+|-+
T Consensus 100 ~iP~i~f~di~~~~~----s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 100 VWPVLSYADIKAGHV----TAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp SSCEEEHHHHHHTCC----CHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CcceecHHHhcCCCC----CHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 699999998754322 1455678889999998887 999888888888887764
No 17
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=42.80 E-value=66 Score=27.64 Aligned_cols=67 Identities=13% Similarity=0.171 Sum_probs=44.4
Q ss_pred ccccccCCc--eEEEEEecCCCCCeEEEeCCeEEEcccCCCeEEEEeccccccccCCee----cCccceeecCCCCCceE
Q 017637 233 GLAPHSDAS--GITILHQVNGVDGLEIKKDGVWIPAHILPDALLVNVGDILEIMSNGVY----RSVEHRATVNSVKERIS 306 (368)
Q Consensus 233 g~~~HtD~~--~lTlL~q~~~v~GLQV~~~g~W~~V~p~~~~lvVniGD~L~~~SnG~~----kS~~HRVv~~~~~~R~S 306 (368)
.+.+|+|+. .+++++. |+ |++ + ..-+.|||.-..|..|+. -|-+|.|..+++..|+-
T Consensus 114 ~I~pH~g~~n~~lR~HL~------L~---------~p~-~-~~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~Rvv 176 (197)
T 3rcq_A 114 HVWPHTGPTNCRLRMHLG------LV---------IPK-E-GCKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLI 176 (197)
T ss_dssp EEEEECCSCTTEEEEEEE------EE---------CCS-S-SEEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEE
T ss_pred CcCCeeCCCCCeEEEEEE------EE---------eCC-C-CcEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEE
Confidence 478888875 4555443 22 222 2 234567888888888864 47789999888888987
Q ss_pred EEe-eecCCCC
Q 017637 307 IAF-FVSPKFD 316 (368)
Q Consensus 307 i~~-F~~P~~d 316 (368)
+.+ |.+|...
T Consensus 177 L~~D~~rPdl~ 187 (197)
T 3rcq_A 177 FIVDVWHPELT 187 (197)
T ss_dssp EEEEEECTTSC
T ss_pred EEEeeeCCCCC
Confidence 665 4566543
No 18
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=37.98 E-value=11 Score=35.94 Aligned_cols=52 Identities=19% Similarity=0.182 Sum_probs=40.1
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKL 117 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~l 117 (368)
++|.||++.+.+. +..+.++.+|+.++|+..+.|-.++.+ ...+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~---d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRY---DEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHC---HHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcC---HHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 6899999876532 336799999999999999999888753 455667777655
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=35.69 E-value=71 Score=29.59 Aligned_cols=39 Identities=15% Similarity=0.019 Sum_probs=31.2
Q ss_pred HHHHHHHHhHhccEEEEecCCCC----HHHHHHHHHHHHHHhc
Q 017637 78 QLDNLRAICKEWGIFQLVNHGIG----SSLLEKLKHDMVEFYK 116 (368)
Q Consensus 78 ~~~~l~~A~~~~GFF~v~nHGI~----~~li~~~~~~~~~FF~ 116 (368)
..+++.+.++.-||..=.+|||+ .+-++.+.+++++|++
T Consensus 306 i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 306 IKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 33677778888888766789975 5889999999999985
No 20
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=35.34 E-value=81 Score=32.04 Aligned_cols=84 Identities=17% Similarity=0.072 Sum_probs=51.1
Q ss_pred eeeeecCCCCCCCCccccccccCCc---eEEEEEecCC---------CCCeEEEeCC--------eEEEcccCCCeEEEE
Q 017637 217 VRMAYYPPCPTPGQVMGLAPHSDAS---GITILHQVNG---------VDGLEIKKDG--------VWIPAHILPDALLVN 276 (368)
Q Consensus 217 lrl~~YPp~~~~~~~~g~~~HtD~~---~lTlL~q~~~---------v~GLQV~~~g--------~W~~V~p~~~~lvVn 276 (368)
+.++.|++- -.+..|.|.- .||+++.-+. .|-|+++..+ ....|.|.-|.+|+.
T Consensus 126 ~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F 199 (633)
T 3kt7_A 126 MSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFF 199 (633)
T ss_dssp EEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEE
T ss_pred EEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEE
Confidence 556778762 2467899952 4666664221 3448887522 467899999999987
Q ss_pred eccccccccCCeecCccceeec-CCCCCceEEEeee-cCCC
Q 017637 277 VGDILEIMSNGVYRSVEHRATV-NSVKERISIAFFV-SPKF 315 (368)
Q Consensus 277 iGD~L~~~SnG~~kS~~HRVv~-~~~~~R~Si~~F~-~P~~ 315 (368)
.-.- + ...|.|.. .+++.|+||+-.+ .|..
T Consensus 200 ~vsp------~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 200 KVLP------G---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp ECCT------T---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred EcCC------C---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 4210 1 24676531 1278899997554 5544
No 21
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=32.28 E-value=53 Score=30.09 Aligned_cols=65 Identities=14% Similarity=0.054 Sum_probs=37.7
Q ss_pred ccccccCCce--------EEEEEecCCCCCeEEEeCCeEEEcccCCCeEEEEeccccccccCCeecCccceeecCCCCCc
Q 017637 233 GLAPHSDASG--------ITILHQVNGVDGLEIKKDGVWIPAHILPDALLVNVGDILEIMSNGVYRSVEHRATVNSVKER 304 (368)
Q Consensus 233 g~~~HtD~~~--------lTlL~q~~~v~GLQV~~~g~W~~V~p~~~~lvVniGD~L~~~SnG~~kS~~HRVv~~~~~~R 304 (368)
.+.+|.|+.- +-+...-...+|..+..+|+-+..++ ..+..+| -+..|.|..+++.+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d-------------~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLD-------------AATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECC-------------TTSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEc-------------CCCeeEEEcCCCCCe
Confidence 4789999822 33333222345555555555444443 1122222 245799999998999
Q ss_pred eEEEeee
Q 017637 305 ISIAFFV 311 (368)
Q Consensus 305 ~Si~~F~ 311 (368)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9998765
No 22
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.79 E-value=17 Score=25.98 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=35.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcc
Q 017637 171 PSLRKTLESYVQELQKLSMELLGAMGKALKMDAKEMEEMFED 212 (368)
Q Consensus 171 ~~fr~~~~~y~~~~~~l~~~ll~~ls~~Lgl~~~~~~~~~~~ 212 (368)
.+-+.+++.|+..-.+-...-+..||+.+||+.+...-.|..
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFqN 55 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFEQ 55 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHhh
Confidence 456888999999888888888899999999999887766643
No 23
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=28.55 E-value=65 Score=28.71 Aligned_cols=50 Identities=18% Similarity=0.203 Sum_probs=37.1
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhc
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYK 116 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~ 116 (368)
+|+-|||+...+ +..+++|.+++.++|+..+.+-.++.+ +..+.++.|-.
T Consensus 17 ei~gvdl~~~l~----~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 17 QISGADLTRPLS----DNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp EEESCCSSSCCC----HHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred EEECCCcCccCC----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 688889987542 236799999999999999999888754 44456666543
No 24
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=28.18 E-value=36 Score=29.31 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=27.2
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGI 99 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI 99 (368)
.||++++.... . .+..+.+.+++++.-.+.+.|||+
T Consensus 125 ~v~~~~y~~~g---~-~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---S-PELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---C-HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---c-HHHHHHHHHHhccCCEEEEcCCCc
Confidence 58999876432 2 235578889998888899999995
No 25
>2p17_A Pirin-like protein; GK1651, structural genomics, south collaboratory for structural genomics, protein structure in secsg; 1.52A {Geobacillus kaustophilus}
Probab=27.60 E-value=62 Score=29.29 Aligned_cols=22 Identities=14% Similarity=0.221 Sum_probs=18.4
Q ss_pred CCCCccccccccCCceEEEEEe
Q 017637 227 TPGQVMGLAPHSDASGITILHQ 248 (368)
Q Consensus 227 ~~~~~~g~~~HtD~~~lTlL~q 248 (368)
.+...++..||.++-++|.+++
T Consensus 47 ~~~~gf~~HPHrg~EtVTyvl~ 68 (277)
T 2p17_A 47 FERGTFDVHPHRGIETVTYVIS 68 (277)
T ss_dssp ECTTCCCCEEECSEEEEEEEEE
T ss_pred CCCCCCCCCCCCCcEEEEEEEE
Confidence 3445688899999999999998
No 26
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=25.53 E-value=1.9e+02 Score=25.91 Aligned_cols=85 Identities=19% Similarity=0.215 Sum_probs=50.0
Q ss_pred HHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHhhccCCCCCcccccc-cCCCCCccCcccccccccC--CC
Q 017637 82 LRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKLPIEEKMRYQRKPGDAEGYGS-VAGSDGILDWGDRFYTVTN--PL 158 (368)
Q Consensus 82 l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~lP~eeK~~~~~~~~~~~GY~~-~~~~~~~~d~~e~~~~~~~--p~ 158 (368)
=..|+++-|.|-|+-.+|+.++.++ .++++ ..| ..|.+. .....+++-|.|.+-+... |.
T Consensus 166 rA~a~~eAGA~~ivlE~vp~~~a~~---it~~l-~iP-------------~igIGag~~~dgQvLV~~D~lG~~~~~~pk 228 (264)
T 1m3u_A 166 DALALEAAGAQLLVLECVPVELAKR---ITEAL-AIP-------------VIGIGAGNVTDGQILVMHDAFGITGGHIPK 228 (264)
T ss_dssp HHHHHHHHTCCEEEEESCCHHHHHH---HHHHC-SSC-------------EEEESSCTTSSEEEECHHHHTTCSCSSCCT
T ss_pred HHHHHHHCCCcEEEEecCCHHHHHH---HHHhC-CCC-------------EEEeCCCCCCCcceeeHHhhcCCCCCCCCC
Confidence 3457889999999999999765443 22221 222 344444 3334567778777655421 21
Q ss_pred ccccCCCCCCCchhHHHHHHHHHHHHHH
Q 017637 159 HQRKSHLFPELPPSLRKTLESYVQELQK 186 (368)
Q Consensus 159 ~~~~~~~wP~~~~~fr~~~~~y~~~~~~ 186 (368)
. ...+-+.-...++.+.+|.++++.
T Consensus 229 f---~k~y~~~~~~~~~a~~~y~~~V~~ 253 (264)
T 1m3u_A 229 F---AKNFLAETGDIRAAVRQYMAEVES 253 (264)
T ss_dssp T---CCCSSTTTSSHHHHHHHHHHHHHH
T ss_pred c---chhhhhhHHHHHHHHHHHHHHHhc
Confidence 1 112222334578889999888763
No 27
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=24.52 E-value=20 Score=26.99 Aligned_cols=17 Identities=35% Similarity=0.407 Sum_probs=14.8
Q ss_pred cccccCCeecCccceee
Q 017637 281 LEIMSNGVYRSVEHRAT 297 (368)
Q Consensus 281 L~~~SnG~~kS~~HRVv 297 (368)
|..-|||+|||++.-|+
T Consensus 49 lrktsngrykstlklvv 65 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVV 65 (131)
T ss_dssp EEECTTSEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEE
Confidence 56789999999998876
No 28
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.81 E-value=61 Score=25.40 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=26.9
Q ss_pred eeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHH
Q 017637 63 TIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSS 102 (368)
Q Consensus 63 vIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~ 102 (368)
|||++.+. ... .+..|.+.|+++|+.-|--.|.+.+
T Consensus 51 VlDl~~l~-~~~---dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLE-SPV---NWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECC-SSC---CHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccC-ChH---HHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 67998875 222 4688999999999999876665544
No 29
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=23.22 E-value=94 Score=28.00 Aligned_cols=51 Identities=6% Similarity=0.033 Sum_probs=38.3
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCC-CCHHHHHHHHHHHHHHhcC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHG-IGSSLLEKLKHDMVEFYKL 117 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHG-I~~~li~~~~~~~~~FF~l 117 (368)
+|+-|||+...+ +..+++|.+++.++|+..+.+-. ++. ++..+.++.|-.+
T Consensus 27 ei~gvdl~~~l~----~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 27 EIRGVKLSPDLD----AATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp EEESCCCCTTCC----HHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred EEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 578889987532 23578999999999999999887 875 5566667776544
No 30
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=23.14 E-value=58 Score=27.80 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=26.6
Q ss_pred CCcee-eCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCC
Q 017637 60 PVPTI-DLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGI 99 (368)
Q Consensus 60 ~iPvI-Dls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI 99 (368)
.||++ ++... .. .+..+.+.+++++.-.+.+.|||+
T Consensus 117 ~ip~~~~y~~~---g~-~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS---AT-EEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS---SS-HHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC---Cc-HHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 66543 12 235578888888888999999994
No 31
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=22.92 E-value=61 Score=21.14 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhhCCCCHHH
Q 017637 183 ELQKLSMELLGAMGKALKMDAKE 205 (368)
Q Consensus 183 ~~~~l~~~ll~~ls~~Lgl~~~~ 205 (368)
+-.+|+..|.+++++.||.++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 45678899999999999998753
No 32
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=22.73 E-value=73 Score=18.08 Aligned_cols=14 Identities=21% Similarity=0.427 Sum_probs=11.0
Q ss_pred CeEEEeCCeEEEcc
Q 017637 254 GLEIKKDGVWIPAH 267 (368)
Q Consensus 254 GLQV~~~g~W~~V~ 267 (368)
-..|+++|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35788899999864
No 33
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=22.17 E-value=81 Score=28.29 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=38.1
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHHHhcC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVEFYKL 117 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~FF~l 117 (368)
+|.=|||+...+ +..+++|.+|+.++|+..+.|-.++.+ +..+.++.|=.+
T Consensus 15 ei~gvdl~~~l~----~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 15 QISGVDISRDIS----AEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp EEESCCTTSCCC----HHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred EEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 678889987432 336799999999999999999888763 445566666543
No 34
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=22.13 E-value=55 Score=28.23 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=26.8
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGI 99 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI 99 (368)
.||++++.... . .+..+.+.+++++.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~g---~-~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG---T-RELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT---C-HHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC---c-HHHHHHHHHHhccCCEEEEcCCCc
Confidence 58998876431 1 224578888998888899999995
No 35
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=21.46 E-value=82 Score=20.79 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhhCCCCHHH
Q 017637 183 ELQKLSMELLGAMGKALKMDAKE 205 (368)
Q Consensus 183 ~~~~l~~~ll~~ls~~Lgl~~~~ 205 (368)
+-++++..|.+++++.||.++++
T Consensus 16 qk~~l~~~lt~~l~~~lg~~~~~ 38 (64)
T 3abf_A 16 KKRELVRRLTEMASRLLGEPYEE 38 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCCCccc
Confidence 44678889999999999998754
No 36
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=21.20 E-value=1.2e+02 Score=27.58 Aligned_cols=51 Identities=10% Similarity=0.051 Sum_probs=38.6
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecC-CCCHHHHHHHHHHHHHHhcC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNH-GIGSSLLEKLKHDMVEFYKL 117 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nH-GI~~~li~~~~~~~~~FF~l 117 (368)
+|+=|||+...+ +..+++|.+|+.++|+..+.|- .++.+ +..+.++.|=.+
T Consensus 21 ei~gvdl~~~L~----d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 21 RVDGVRLGGDLD----DATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEESCCCSTTCC----HHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred eEeCCCccccCC----HHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 688889985332 3367999999999999999998 78764 556677777555
No 37
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=21.06 E-value=23 Score=25.88 Aligned_cols=18 Identities=17% Similarity=0.497 Sum_probs=14.8
Q ss_pred EEeccccccccCCeecCc
Q 017637 275 VNVGDILEIMSNGVYRSV 292 (368)
Q Consensus 275 VniGD~L~~~SnG~~kS~ 292 (368)
..+||.||++-+|+++++
T Consensus 31 lHCGE~feV~v~~~Wipt 48 (81)
T 3nrl_A 31 LHCGECFDVKVKDVWVPV 48 (81)
T ss_dssp CCTTCEEEEEETTEEEEE
T ss_pred cccccEEEEEECCEEEEE
Confidence 458899999999988876
No 38
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=20.61 E-value=89 Score=18.34 Aligned_cols=16 Identities=31% Similarity=0.667 Sum_probs=14.5
Q ss_pred HHHHHHHHhHhccEEE
Q 017637 78 QLDNLRAICKEWGIFQ 93 (368)
Q Consensus 78 ~~~~l~~A~~~~GFF~ 93 (368)
.++.|.-.|.+-|||+
T Consensus 11 LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 11 LVEALYLVCGERGFFY 26 (30)
T ss_dssp HHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHhccCcccc
Confidence 5688999999999998
No 39
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=20.49 E-value=88 Score=21.04 Aligned_cols=33 Identities=30% Similarity=0.546 Sum_probs=24.8
Q ss_pred HHHHHHHHhHhccEEEEecCCCCHHHHHHHHHHHHH
Q 017637 78 QLDNLRAICKEWGIFQLVNHGIGSSLLEKLKHDMVE 113 (368)
Q Consensus 78 ~~~~l~~A~~~~GFF~v~nHGI~~~li~~~~~~~~~ 113 (368)
.+.+|.+.|+.+| +---|.-.++++++......
T Consensus 14 kV~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~~ 46 (55)
T 2do1_A 14 KLAELKQECLARG---LETKGIKQDLIHRLQAYLEE 46 (55)
T ss_dssp CHHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHhc
Confidence 3688999999999 44567777888888765543
No 40
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=20.18 E-value=71 Score=27.94 Aligned_cols=36 Identities=8% Similarity=-0.009 Sum_probs=27.2
Q ss_pred CCceeeCCCCCCCCchHHHHHHHHHHhHhccEEEEecCCC
Q 017637 60 PVPTIDLECLLSEEDTNSQLDNLRAICKEWGIFQLVNHGI 99 (368)
Q Consensus 60 ~iPvIDls~l~~~d~~~~~~~~l~~A~~~~GFF~v~nHGI 99 (368)
.||++++... +. .+..+.+.+++++.-.+.+.|||+
T Consensus 161 ~v~~~~y~~~--g~--~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GS--VELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST--TC--HHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CceEecCCCC--Cc--HHHHHHHHHHhccCCEEEEcCCCc
Confidence 6999988643 12 234578888998888899999996
Done!