Query 017640
Match_columns 368
No_of_seqs 204 out of 2469
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 10:23:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017640.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017640hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 1.3E-50 2.8E-55 380.8 32.5 316 49-367 6-323 (405)
2 PLN02855 Bifunctional selenocy 100.0 3.6E-46 7.8E-51 358.4 33.9 323 44-367 10-332 (424)
3 PRK09295 bifunctional cysteine 100.0 5.9E-46 1.3E-50 355.1 33.7 318 49-367 6-324 (406)
4 PRK10874 cysteine sulfinate de 100.0 4.1E-45 8.9E-50 348.9 34.1 312 49-366 7-318 (401)
5 TIGR03392 FeS_syn_CsdA cystein 100.0 3.8E-45 8.2E-50 348.8 33.1 313 49-367 4-316 (398)
6 TIGR01979 sufS cysteine desulf 100.0 8.7E-44 1.9E-48 340.1 33.6 317 50-367 2-318 (403)
7 COG1104 NifS Cysteine sulfinat 100.0 1.7E-42 3.8E-47 314.3 28.5 279 68-366 2-283 (386)
8 PF00266 Aminotran_5: Aminotra 100.0 1.3E-42 2.8E-47 328.4 24.1 298 69-367 1-298 (371)
9 PLN02651 cysteine desulfurase 100.0 7.6E-41 1.6E-45 315.3 29.9 282 69-367 1-283 (364)
10 cd06453 SufS_like Cysteine des 100.0 1.4E-39 3E-44 308.1 31.4 295 69-367 1-298 (373)
11 KOG1549 Cysteine desulfurase N 100.0 1.5E-39 3.3E-44 296.0 27.3 273 65-360 41-319 (428)
12 TIGR02006 IscS cysteine desulf 100.0 3.3E-38 7.1E-43 301.1 30.9 282 68-366 4-285 (402)
13 TIGR01976 am_tr_V_VC1184 cyste 100.0 4.5E-38 9.6E-43 300.2 31.7 298 49-367 4-317 (397)
14 TIGR01977 am_tr_V_EF2568 cyste 100.0 7.3E-38 1.6E-42 296.6 32.3 291 69-367 1-293 (376)
15 PLN02724 Molybdenum cofactor s 100.0 1.8E-38 3.9E-43 324.4 28.4 305 48-364 21-360 (805)
16 TIGR03402 FeS_nifS cysteine de 100.0 2.9E-37 6.3E-42 292.7 30.6 277 69-366 1-278 (379)
17 TIGR03235 DNA_S_dndA cysteine 100.0 2.3E-37 5E-42 290.7 29.6 280 70-367 1-283 (353)
18 TIGR01814 kynureninase kynuren 100.0 1.1E-36 2.4E-41 291.0 30.0 310 44-364 6-329 (406)
19 TIGR03403 nifS_epsilon cystein 100.0 1.9E-36 4E-41 287.4 30.9 280 69-367 1-282 (382)
20 PRK02948 cysteine desulfurase; 100.0 4.4E-36 9.6E-41 284.8 31.7 276 68-363 1-276 (381)
21 PRK14012 cysteine desulfurase; 100.0 4.5E-36 9.8E-41 286.7 30.6 282 68-366 4-287 (404)
22 PLN02409 serine--glyoxylate am 100.0 2.6E-33 5.6E-38 266.8 25.4 281 67-367 8-295 (401)
23 cd06451 AGAT_like Alanine-glyo 100.0 1.5E-30 3.2E-35 244.8 25.0 273 74-367 5-281 (356)
24 TIGR02326 transamin_PhnW 2-ami 100.0 3.1E-30 6.8E-35 243.2 24.1 248 107-366 31-285 (363)
25 cd00611 PSAT_like Phosphoserin 100.0 4.7E-30 1E-34 240.6 23.7 270 74-366 5-281 (355)
26 PRK02769 histidine decarboxyla 100.0 1E-29 2.2E-34 238.4 25.2 275 69-366 24-313 (380)
27 COG0075 Serine-pyruvate aminot 100.0 3.5E-29 7.5E-34 229.4 25.1 277 70-366 7-286 (383)
28 PRK03080 phosphoserine aminotr 100.0 1.3E-29 2.9E-34 239.4 22.0 276 66-367 11-295 (378)
29 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 7.7E-29 1.7E-33 235.3 26.0 274 67-367 19-303 (387)
30 KOG0257 Kynurenine aminotransf 100.0 3.5E-29 7.5E-34 225.5 22.0 263 71-367 36-329 (420)
31 COG0436 Aspartate/tyrosine/aro 100.0 6.3E-29 1.4E-33 234.3 24.5 267 67-367 29-316 (393)
32 TIGR01364 serC_1 phosphoserine 100.0 3.7E-29 8E-34 233.0 22.5 263 78-366 2-273 (349)
33 PRK13479 2-aminoethylphosphona 100.0 2.5E-28 5.4E-33 230.7 27.2 272 73-367 10-287 (368)
34 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 6.1E-28 1.3E-32 227.4 24.6 264 77-367 11-284 (361)
35 TIGR01788 Glu-decarb-GAD gluta 100.0 8.1E-28 1.8E-32 228.5 24.9 276 69-367 35-349 (431)
36 PRK05355 3-phosphoserine/phosp 100.0 4.5E-28 9.8E-33 226.8 22.3 270 70-364 5-282 (360)
37 PLN03032 serine decarboxylase; 100.0 2.4E-27 5.2E-32 220.8 25.2 274 68-363 24-314 (374)
38 COG3844 Kynureninase [Amino ac 100.0 3.8E-27 8.3E-32 205.0 24.3 299 50-363 21-325 (407)
39 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 4E-27 8.6E-32 221.3 26.3 268 77-366 8-280 (355)
40 cd00613 GDC-P Glycine cleavage 100.0 6.8E-27 1.5E-31 223.2 26.5 292 66-365 20-329 (398)
41 PRK07681 aspartate aminotransf 100.0 2.7E-26 5.8E-31 219.0 25.9 259 66-363 32-312 (399)
42 PRK09105 putative aminotransfe 100.0 2E-26 4.3E-31 217.3 24.7 253 66-366 43-304 (370)
43 PRK13520 L-tyrosine decarboxyl 100.0 2.2E-26 4.8E-31 217.6 25.1 269 70-367 24-305 (371)
44 TIGR01141 hisC histidinol-phos 100.0 1.6E-26 3.4E-31 216.7 23.7 256 66-366 19-283 (346)
45 PRK05957 aspartate aminotransf 100.0 3.9E-26 8.5E-31 217.0 26.3 266 66-365 27-308 (389)
46 COG1168 MalY Bifunctional PLP- 100.0 1.9E-26 4.1E-31 205.9 22.2 266 66-367 25-312 (388)
47 PRK09276 LL-diaminopimelate am 100.0 3.9E-26 8.3E-31 217.0 25.8 262 66-366 31-314 (385)
48 PRK08960 hypothetical protein; 100.0 3.1E-26 6.7E-31 217.8 24.9 259 66-363 32-308 (387)
49 PLN03026 histidinol-phosphate 100.0 4.1E-26 8.8E-31 216.0 25.4 252 66-364 52-311 (380)
50 TIGR03540 DapC_direct LL-diami 99.9 4.5E-26 9.7E-31 216.4 25.2 261 65-363 28-310 (383)
51 PRK06225 aspartate aminotransf 99.9 5.2E-26 1.1E-30 215.7 25.3 259 66-365 28-299 (380)
52 PRK14807 histidinol-phosphate 99.9 3.9E-26 8.5E-31 214.1 24.0 256 67-366 23-285 (351)
53 PRK06108 aspartate aminotransf 99.9 5.5E-26 1.2E-30 215.8 25.2 266 66-367 24-309 (382)
54 PRK05387 histidinol-phosphate 99.9 4.4E-26 9.5E-31 214.2 24.2 252 66-363 24-283 (353)
55 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 8E-26 1.7E-30 213.5 26.0 270 67-363 7-287 (370)
56 PRK04870 histidinol-phosphate 99.9 4.4E-26 9.4E-31 214.4 23.8 256 66-366 26-290 (356)
57 KOG2862 Alanine-glyoxylate ami 99.9 8.5E-26 1.9E-30 195.3 23.3 277 71-363 20-301 (385)
58 PRK01533 histidinol-phosphate 99.9 3.6E-26 7.8E-31 215.1 22.9 251 66-363 29-292 (366)
59 PRK00451 glycine dehydrogenase 99.9 6.8E-26 1.5E-30 219.3 25.4 289 67-367 69-375 (447)
60 PLN00175 aminotransferase fami 99.9 1.3E-25 2.8E-30 214.8 26.8 259 66-363 54-332 (413)
61 PRK06207 aspartate aminotransf 99.9 1.2E-25 2.6E-30 214.6 26.3 267 66-366 39-327 (405)
62 PRK07324 transaminase; Validat 99.9 1.9E-26 4.2E-31 217.8 19.2 260 65-365 25-297 (373)
63 PLN00145 tyrosine/nicotianamin 99.9 1.7E-25 3.8E-30 214.7 25.7 264 66-367 52-347 (430)
64 PRK06290 aspartate aminotransf 99.9 2E-25 4.4E-30 212.9 26.0 256 66-363 44-323 (410)
65 PLN02187 rooty/superroot1 99.9 1.8E-25 3.9E-30 216.1 25.5 264 66-365 66-359 (462)
66 PTZ00094 serine hydroxymethylt 99.9 9.1E-26 2E-30 218.0 23.3 274 66-366 34-324 (452)
67 PRK05942 aspartate aminotransf 99.9 2.7E-25 5.8E-30 211.7 26.1 260 66-363 35-316 (394)
68 TIGR01437 selA_rel uncharacter 99.9 1.2E-25 2.7E-30 211.0 23.2 248 76-367 22-286 (363)
69 COG0079 HisC Histidinol-phosph 99.9 3.2E-25 6.8E-30 205.8 25.6 254 66-364 22-283 (356)
70 TIGR01822 2am3keto_CoA 2-amino 99.9 3.3E-25 7.2E-30 211.2 26.2 260 65-366 37-314 (393)
71 TIGR01366 serC_3 phosphoserine 99.9 5.5E-26 1.2E-30 213.1 20.4 269 75-367 10-284 (361)
72 PRK07682 hypothetical protein; 99.9 1.9E-25 4.1E-30 211.8 24.3 258 66-363 20-299 (378)
73 PRK03158 histidinol-phosphate 99.9 2.6E-25 5.6E-30 209.4 24.4 252 66-363 29-292 (359)
74 PRK09147 succinyldiaminopimela 99.9 3.5E-25 7.6E-30 211.2 25.5 257 65-362 28-316 (396)
75 PRK03321 putative aminotransfe 99.9 2E-25 4.4E-30 209.6 23.5 253 66-363 22-286 (352)
76 PRK07366 succinyldiaminopimela 99.9 2.1E-25 4.6E-30 212.1 23.5 260 66-363 30-312 (388)
77 PRK04366 glycine dehydrogenase 99.9 1E-24 2.2E-29 211.7 28.5 283 69-363 71-368 (481)
78 PRK08068 transaminase; Reviewe 99.9 4.8E-25 1E-29 209.7 25.6 260 66-363 32-313 (389)
79 PRK12414 putative aminotransfe 99.9 4.2E-25 9.2E-30 209.6 25.0 262 66-363 29-307 (384)
80 TIGR03537 DapC succinyldiamino 99.9 4.7E-25 1E-29 206.8 24.9 255 68-363 2-278 (350)
81 PRK06348 aspartate aminotransf 99.9 5.6E-25 1.2E-29 208.8 25.5 259 66-365 29-309 (384)
82 PRK07179 hypothetical protein; 99.9 8.4E-25 1.8E-29 209.2 26.9 261 65-367 53-325 (407)
83 TIGR03538 DapC_gpp succinyldia 99.9 3.7E-25 8E-30 210.8 24.2 258 65-363 27-316 (393)
84 TIGR03812 tyr_de_CO2_Arch tyro 99.9 9.6E-25 2.1E-29 206.6 26.9 261 79-363 32-307 (373)
85 cd06450 DOPA_deC_like DOPA dec 99.9 7.8E-26 1.7E-30 211.8 18.8 219 102-367 29-271 (345)
86 PRK13355 bifunctional HTH-doma 99.9 5.1E-25 1.1E-29 216.4 25.3 200 65-283 145-368 (517)
87 PRK08361 aspartate aminotransf 99.9 1.3E-25 2.8E-30 213.8 20.2 263 66-366 33-315 (391)
88 PRK05764 aspartate aminotransf 99.9 3.1E-25 6.6E-30 211.5 22.6 262 66-367 31-315 (393)
89 PRK07337 aminotransferase; Val 99.9 7.5E-25 1.6E-29 208.4 24.4 260 66-363 30-306 (388)
90 PTZ00433 tyrosine aminotransfe 99.9 1.1E-24 2.3E-29 208.7 24.9 262 65-366 32-331 (412)
91 PLN02656 tyrosine transaminase 99.9 1.2E-24 2.5E-29 208.2 24.9 263 65-365 30-324 (409)
92 PRK00950 histidinol-phosphate 99.9 4.1E-25 8.9E-30 208.2 21.3 207 66-292 34-247 (361)
93 cd06454 KBL_like KBL_like; thi 99.9 1E-24 2.2E-29 204.6 23.6 245 78-363 15-273 (349)
94 PRK02731 histidinol-phosphate 99.9 1.6E-24 3.5E-29 204.6 25.0 254 66-366 32-297 (367)
95 PRK08912 hypothetical protein; 99.9 2E-24 4.4E-29 205.3 25.6 259 66-363 26-305 (387)
96 PTZ00377 alanine aminotransfer 99.9 8.6E-25 1.9E-29 213.1 22.6 252 79-367 89-389 (481)
97 PRK09082 methionine aminotrans 99.9 1.5E-24 3.3E-29 206.0 23.6 262 66-362 30-308 (386)
98 PRK08153 histidinol-phosphate 99.9 3.1E-24 6.6E-29 202.6 25.4 252 66-363 32-293 (369)
99 PRK15481 transcriptional regul 99.9 1.1E-24 2.4E-29 209.9 22.8 255 67-363 86-356 (431)
100 PRK05166 histidinol-phosphate 99.9 2.4E-24 5.2E-29 203.6 24.5 253 66-363 36-302 (371)
101 PRK08056 threonine-phosphate d 99.9 1.5E-24 3.2E-29 203.8 22.7 253 66-366 20-286 (356)
102 PLN00143 tyrosine/nicotianamin 99.9 3.8E-24 8.3E-29 204.5 25.8 202 65-283 31-257 (409)
103 PRK08363 alanine aminotransfer 99.9 2.5E-24 5.4E-29 205.4 24.1 264 66-366 30-318 (398)
104 PRK03967 histidinol-phosphate 99.9 3.5E-24 7.6E-29 199.7 24.6 204 66-293 18-229 (337)
105 PRK09148 aminotransferase; Val 99.9 4.1E-24 8.9E-29 204.1 25.4 261 65-363 29-311 (405)
106 PRK07568 aspartate aminotransf 99.9 4.7E-24 1E-28 203.6 25.8 259 66-366 30-311 (397)
107 PRK04635 histidinol-phosphate 99.9 1.6E-24 3.5E-29 203.5 21.7 248 66-366 31-289 (354)
108 TIGR01264 tyr_amTase_E tyrosin 99.9 2.3E-24 5E-29 205.9 23.0 262 66-366 31-322 (401)
109 PRK01688 histidinol-phosphate 99.9 1.8E-24 3.8E-29 202.9 21.8 217 114-366 60-288 (351)
110 PRK02610 histidinol-phosphate 99.9 3.3E-24 7.1E-29 202.8 23.6 254 67-365 29-306 (374)
111 PRK07550 hypothetical protein; 99.9 7.4E-24 1.6E-28 201.4 25.9 262 66-365 29-311 (386)
112 TIGR01265 tyr_nico_aTase tyros 99.9 4.4E-24 9.5E-29 203.9 24.0 264 65-366 30-324 (403)
113 PRK03317 histidinol-phosphate 99.9 4.8E-24 1E-28 201.4 23.7 252 67-363 27-298 (368)
114 cd00615 Orn_deC_like Ornithine 99.9 6.4E-25 1.4E-29 200.7 16.6 221 110-362 58-294 (294)
115 PLN02452 phosphoserine transam 99.9 4.7E-24 1E-28 198.8 22.6 274 68-366 7-288 (365)
116 PRK07392 threonine-phosphate d 99.9 7.9E-24 1.7E-28 199.3 24.3 253 66-366 22-289 (360)
117 PRK06107 aspartate aminotransf 99.9 7.8E-24 1.7E-28 202.1 24.6 266 66-366 33-317 (402)
118 PRK07908 hypothetical protein; 99.9 9.9E-24 2.1E-28 197.8 24.8 250 66-366 22-278 (349)
119 PRK07777 aminotransferase; Val 99.9 1E-23 2.2E-28 200.5 25.2 259 66-363 24-305 (387)
120 PRK07309 aromatic amino acid a 99.9 1.2E-23 2.6E-28 200.1 25.5 259 66-363 30-310 (391)
121 PRK14809 histidinol-phosphate 99.9 1.1E-23 2.3E-28 198.2 24.9 207 66-293 30-247 (357)
122 PLN02368 alanine transaminase 99.9 7.6E-24 1.7E-28 201.1 24.0 225 113-367 109-381 (407)
123 PRK07683 aminotransferase A; V 99.9 1.6E-23 3.4E-28 199.1 26.2 259 66-363 28-306 (387)
124 TIGR03799 NOD_PanD_pyr putativ 99.9 1E-23 2.3E-28 204.4 25.1 300 48-368 74-424 (522)
125 PRK09265 aminotransferase AlaT 99.9 2.3E-23 4.9E-28 199.2 27.0 200 65-283 32-255 (404)
126 PLN02376 1-aminocyclopropane-1 99.9 8.2E-24 1.8E-28 205.6 24.2 209 66-286 46-297 (496)
127 PLN02450 1-aminocyclopropane-1 99.9 8.6E-24 1.9E-28 204.7 23.7 267 66-363 38-347 (468)
128 KOG0259 Tyrosine aminotransfer 99.9 1.2E-23 2.6E-28 186.8 21.9 269 66-367 61-356 (447)
129 PRK08636 aspartate aminotransf 99.9 2.1E-23 4.6E-28 199.2 25.5 260 66-363 33-321 (403)
130 PLN02822 serine palmitoyltrans 99.9 3.1E-23 6.8E-28 201.0 26.7 263 65-367 108-391 (481)
131 TIGR00858 bioF 8-amino-7-oxono 99.9 3.9E-23 8.4E-28 194.6 26.4 259 65-363 15-288 (360)
132 PRK08133 O-succinylhomoserine 99.9 3E-24 6.6E-29 203.3 18.5 169 110-291 60-231 (390)
133 PLN02607 1-aminocyclopropane-1 99.9 1.1E-23 2.4E-28 202.5 22.6 218 66-290 47-302 (447)
134 PRK06358 threonine-phosphate d 99.9 3.6E-23 7.7E-28 194.2 25.5 252 67-366 20-287 (354)
135 PLN02414 glycine dehydrogenase 99.9 4.5E-23 9.8E-28 210.4 25.6 236 107-365 564-827 (993)
136 PRK07504 O-succinylhomoserine 99.9 2.1E-23 4.5E-28 198.0 21.0 252 67-366 30-285 (398)
137 PRK00011 glyA serine hydroxyme 99.9 3.7E-23 8E-28 198.5 22.6 268 66-367 25-305 (416)
138 PRK05937 8-amino-7-oxononanoat 99.9 2.5E-23 5.3E-28 196.5 20.9 253 70-362 14-283 (370)
139 PRK08175 aminotransferase; Val 99.9 6.7E-23 1.5E-27 195.3 23.9 259 66-363 29-310 (395)
140 PRK06460 hypothetical protein; 99.9 2.3E-23 5E-28 196.4 20.4 221 107-366 41-264 (376)
141 TIGR01325 O_suc_HS_sulf O-succ 99.9 2.6E-23 5.6E-28 196.5 20.5 218 110-366 53-273 (380)
142 PRK08249 cystathionine gamma-s 99.9 1.9E-23 4.1E-28 198.0 19.5 223 105-366 58-283 (398)
143 PRK12462 phosphoserine aminotr 99.9 8.1E-23 1.8E-27 188.5 23.0 272 70-366 6-287 (364)
144 cd00614 CGS_like CGS_like: Cys 99.9 2.3E-23 5E-28 196.4 19.5 219 109-366 38-260 (369)
145 cd00378 SHMT Serine-glycine hy 99.9 5.1E-23 1.1E-27 196.8 21.8 267 67-367 20-301 (402)
146 PRK05958 8-amino-7-oxononanoat 99.9 2.1E-22 4.6E-27 191.4 25.8 259 65-363 38-310 (385)
147 cd00609 AAT_like Aspartate ami 99.9 2.9E-23 6.3E-28 194.3 19.5 224 113-366 38-281 (350)
148 PLN02414 glycine dehydrogenase 99.9 2.7E-22 5.8E-27 204.8 27.2 285 66-367 100-404 (993)
149 PRK06939 2-amino-3-ketobutyrat 99.9 1.7E-22 3.7E-27 192.8 24.4 260 65-363 41-316 (397)
150 PLN02231 alanine transaminase 99.9 1.6E-22 3.5E-27 197.8 24.5 228 110-367 167-441 (534)
151 PRK05839 hypothetical protein; 99.9 1.7E-22 3.7E-27 191.1 23.7 211 66-292 24-256 (374)
152 TIGR01825 gly_Cac_T_rel pyrido 99.9 2.6E-22 5.7E-27 190.8 25.0 257 65-363 32-304 (385)
153 PRK05367 glycine dehydrogenase 99.9 2.3E-22 5.1E-27 206.1 26.3 281 69-367 79-376 (954)
154 PRK07503 methionine gamma-lyas 99.9 5.6E-23 1.2E-27 195.3 20.1 169 110-291 64-235 (403)
155 TIGR01328 met_gam_lyase methio 99.9 4.4E-23 9.6E-28 195.3 19.1 220 110-367 58-281 (391)
156 PRK09028 cystathionine beta-ly 99.9 4.8E-23 1E-27 193.7 19.1 216 112-366 62-280 (394)
157 PRK14808 histidinol-phosphate 99.9 2.9E-22 6.2E-27 186.6 24.0 243 66-363 19-272 (335)
158 PLN02483 serine palmitoyltrans 99.9 4.8E-22 1E-26 193.1 26.5 262 66-366 100-390 (489)
159 PF00155 Aminotran_1_2: Aminot 99.9 4.1E-23 8.8E-28 194.8 18.4 260 67-363 2-295 (363)
160 PRK08134 O-acetylhomoserine am 99.9 1.3E-22 2.7E-27 193.8 21.8 161 109-282 62-224 (433)
161 cd06502 TA_like Low-specificit 99.9 3.8E-23 8.2E-28 193.0 18.0 244 78-363 9-267 (338)
162 PRK08776 cystathionine gamma-s 99.9 8.5E-23 1.8E-27 193.8 20.5 218 110-366 59-280 (405)
163 PRK06855 aminotransferase; Val 99.9 1.7E-22 3.6E-27 194.5 22.7 262 66-366 32-328 (433)
164 TIGR01324 cysta_beta_ly_B cyst 99.9 9.3E-23 2E-27 191.8 20.5 169 110-291 49-220 (377)
165 PRK07590 L,L-diaminopimelate a 99.9 1.5E-22 3.3E-27 193.7 22.4 264 66-363 34-335 (409)
166 TIGR01821 5aminolev_synth 5-am 99.9 5.1E-22 1.1E-26 189.8 25.6 261 67-366 46-320 (402)
167 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.1E-22 2.5E-27 189.0 20.3 241 66-366 17-267 (330)
168 PRK13392 5-aminolevulinate syn 99.9 3.8E-22 8.3E-27 191.1 24.5 261 68-367 48-322 (410)
169 PRK04781 histidinol-phosphate 99.9 6.1E-22 1.3E-26 186.5 25.2 221 114-366 62-295 (364)
170 PRK06767 methionine gamma-lyas 99.9 6.1E-23 1.3E-27 194.4 18.1 218 111-367 61-282 (386)
171 PRK07865 N-succinyldiaminopime 99.9 3.7E-22 8E-27 188.3 23.3 247 66-363 27-295 (364)
172 TIGR03542 DAPAT_plant LL-diami 99.9 1.4E-22 3E-27 193.6 20.2 203 66-287 33-265 (402)
173 COG0076 GadB Glutamate decarbo 99.9 5.9E-22 1.3E-26 189.0 24.4 277 68-367 63-365 (460)
174 PRK08045 cystathionine gamma-s 99.9 1.3E-22 2.7E-27 191.6 19.6 218 110-366 51-272 (386)
175 PRK07810 O-succinylhomoserine 99.9 1.4E-22 2.9E-27 192.5 19.7 218 110-366 69-290 (403)
176 PRK06234 methionine gamma-lyas 99.9 1.9E-22 4.1E-27 191.7 20.7 169 110-291 63-236 (400)
177 PLN02672 methionine S-methyltr 99.9 1.5E-21 3.2E-26 199.9 28.5 258 66-363 697-989 (1082)
178 PRK08861 cystathionine gamma-s 99.9 1.4E-22 3.1E-27 190.7 19.6 169 110-291 52-224 (388)
179 PRK08354 putative aminotransfe 99.9 1.2E-21 2.7E-26 180.6 25.1 184 66-282 8-196 (311)
180 TIGR00474 selA seryl-tRNA(sec) 99.9 1.8E-21 4E-26 185.7 26.8 222 55-291 70-309 (454)
181 PRK06836 aspartate aminotransf 99.9 1.3E-21 2.9E-26 186.3 25.7 208 66-287 33-263 (394)
182 TIGR03539 DapC_actino succinyl 99.9 6.9E-22 1.5E-26 185.9 23.1 246 66-363 21-289 (357)
183 PRK07811 cystathionine gamma-s 99.9 1.5E-22 3.2E-27 191.7 18.5 218 110-366 60-281 (388)
184 TIGR01329 cysta_beta_ly_E cyst 99.9 2.7E-22 5.8E-27 189.2 20.1 170 111-294 47-220 (378)
185 PRK11658 UDP-4-amino-4-deoxy-L 99.9 1.2E-21 2.7E-26 185.2 24.6 260 79-365 12-276 (379)
186 PRK08064 cystathionine beta-ly 99.9 3E-22 6.5E-27 189.7 20.2 175 108-296 51-229 (390)
187 PRK09064 5-aminolevulinate syn 99.9 2.4E-21 5.2E-26 185.5 26.4 262 66-366 46-321 (407)
188 TIGR02080 O_succ_thio_ly O-suc 99.9 3.4E-22 7.5E-27 188.5 19.7 217 110-365 50-270 (382)
189 COG1167 ARO8 Transcriptional r 99.9 1.1E-21 2.3E-26 189.2 23.5 222 112-364 133-374 (459)
190 PLN02263 serine decarboxylase 99.9 3.7E-21 8E-26 182.0 26.4 235 108-363 130-381 (470)
191 PLN02242 methionine gamma-lyas 99.9 1.8E-22 3.8E-27 192.3 16.9 174 106-293 71-249 (418)
192 PRK04311 selenocysteine syntha 99.9 4.1E-21 8.9E-26 183.8 26.3 214 65-291 84-314 (464)
193 PLN02721 threonine aldolase 99.9 4.2E-22 9.1E-27 187.1 18.7 209 66-292 5-230 (353)
194 PRK08114 cystathionine beta-ly 99.9 3.1E-22 6.8E-27 187.7 17.1 173 105-290 56-233 (395)
195 PRK09257 aromatic amino acid a 99.9 1.1E-21 2.3E-26 187.2 21.1 263 66-363 26-332 (396)
196 COG0156 BioF 7-keto-8-aminopel 99.9 4E-21 8.7E-26 178.1 24.0 257 66-362 39-312 (388)
197 PRK08574 cystathionine gamma-s 99.9 4E-22 8.7E-27 188.2 17.6 217 109-366 51-272 (385)
198 PRK13393 5-aminolevulinate syn 99.9 6.1E-21 1.3E-25 182.5 25.9 256 69-363 49-318 (406)
199 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.6E-21 5.7E-26 181.6 22.6 234 111-368 18-256 (352)
200 PLN03226 serine hydroxymethylt 99.9 3.7E-21 8E-26 185.5 24.0 284 67-367 35-336 (475)
201 PRK07050 cystathionine beta-ly 99.9 8.9E-22 1.9E-26 186.5 19.2 170 109-291 63-236 (394)
202 PRK06959 putative threonine-ph 99.9 1.6E-21 3.5E-26 181.7 20.7 207 114-366 56-270 (339)
203 PRK13238 tnaA tryptophanase/L- 99.9 2.9E-21 6.3E-26 185.8 22.9 259 66-367 36-338 (460)
204 PRK06425 histidinol-phosphate 99.9 9.2E-22 2E-26 183.1 18.9 165 114-293 43-218 (332)
205 PRK08248 O-acetylhomoserine am 99.9 8.8E-22 1.9E-26 188.0 18.8 161 110-283 63-225 (431)
206 PRK08247 cystathionine gamma-s 99.9 8.2E-22 1.8E-26 185.5 18.4 217 110-366 51-271 (366)
207 PTZ00376 aspartate aminotransf 99.9 8.1E-22 1.8E-26 188.3 17.8 272 66-363 29-337 (404)
208 PLN02271 serine hydroxymethylt 99.9 9.2E-21 2E-25 180.4 24.5 288 68-367 150-457 (586)
209 cd01494 AAT_I Aspartate aminot 99.9 2.9E-21 6.2E-26 161.7 18.3 162 114-283 3-170 (170)
210 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 3.8E-21 8.2E-26 183.8 21.5 163 110-285 56-220 (418)
211 PRK09275 aspartate aminotransf 99.9 4.8E-21 1E-25 185.2 22.1 204 66-285 100-328 (527)
212 PRK05664 threonine-phosphate d 99.9 9E-21 2E-25 176.3 22.1 202 115-363 53-262 (330)
213 PLN03227 serine palmitoyltrans 99.9 1.7E-20 3.7E-25 178.0 24.4 248 78-362 12-280 (392)
214 PRK05967 cystathionine beta-ly 99.9 3E-21 6.6E-26 181.3 18.9 171 108-291 61-234 (395)
215 PRK07671 cystathionine beta-ly 99.9 3.6E-21 7.8E-26 181.4 19.2 217 110-366 49-269 (377)
216 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.7E-20 3.8E-25 177.8 23.7 260 79-367 8-282 (380)
217 PRK05968 hypothetical protein; 99.9 4.3E-21 9.3E-26 181.8 19.4 219 110-367 62-283 (389)
218 PRK06176 cystathionine gamma-s 99.9 4.3E-21 9.4E-26 180.9 19.3 168 110-291 49-220 (380)
219 TIGR03801 asp_4_decarbox aspar 99.9 9.5E-21 2E-25 182.9 21.8 209 66-285 94-327 (521)
220 PRK09440 avtA valine--pyruvate 99.9 6.2E-21 1.3E-25 183.2 20.4 217 66-293 30-273 (416)
221 PLN02509 cystathionine beta-ly 99.9 7.4E-21 1.6E-25 182.1 20.8 216 111-366 133-352 (464)
222 PRK07812 O-acetylhomoserine am 99.9 1.3E-20 2.8E-25 179.8 21.7 163 110-284 68-232 (436)
223 PRK06084 O-acetylhomoserine am 99.9 5.1E-21 1.1E-25 182.6 18.9 160 110-282 57-218 (425)
224 PRK05939 hypothetical protein; 99.9 9.7E-21 2.1E-25 179.3 20.6 162 109-284 45-208 (397)
225 PRK05994 O-acetylhomoserine am 99.9 8.2E-21 1.8E-25 181.6 20.3 159 111-282 63-223 (427)
226 PLN02880 tyrosine decarboxylas 99.9 8E-21 1.7E-25 184.0 20.1 287 70-367 85-403 (490)
227 TIGR02379 ECA_wecE TDP-4-keto- 99.9 4E-20 8.6E-25 174.3 23.8 195 79-297 9-210 (376)
228 PRK05613 O-acetylhomoserine am 99.9 1.1E-20 2.4E-25 180.3 20.0 167 107-285 65-234 (437)
229 PRK07049 methionine gamma-lyas 99.9 9.1E-21 2E-25 181.2 19.4 218 111-366 83-314 (427)
230 COG1103 Archaea-specific pyrid 99.9 1.4E-20 3E-25 160.2 18.2 271 66-366 15-301 (382)
231 PLN02590 probable tyrosine dec 99.9 5.7E-20 1.2E-24 178.2 24.9 296 53-367 120-451 (539)
232 PRK13580 serine hydroxymethylt 99.9 2.5E-20 5.4E-25 176.8 21.7 265 67-363 50-358 (493)
233 PLN02955 8-amino-7-oxononanoat 99.9 7.5E-20 1.6E-24 173.4 24.0 260 67-359 103-386 (476)
234 PRK13034 serine hydroxymethylt 99.9 4.7E-20 1E-24 176.2 22.3 265 67-367 29-308 (416)
235 PRK07269 cystathionine gamma-s 99.9 1.4E-20 3.1E-25 176.2 17.7 215 110-366 53-271 (364)
236 PF00282 Pyridoxal_deC: Pyrido 99.9 9.2E-20 2E-24 171.0 23.1 283 70-367 42-358 (373)
237 TIGR01365 serC_2 phosphoserine 99.9 7E-20 1.5E-24 170.9 21.8 245 103-366 31-285 (374)
238 PRK06702 O-acetylhomoserine am 99.9 7.3E-20 1.6E-24 173.7 22.2 163 110-284 60-225 (432)
239 TIGR00461 gcvP glycine dehydro 99.9 3.5E-19 7.6E-24 180.0 26.9 280 69-363 488-785 (939)
240 TIGR03576 pyridox_MJ0158 pyrid 99.8 4.7E-19 1E-23 165.0 24.3 228 79-362 34-272 (346)
241 PRK07582 cystathionine gamma-l 99.8 8.6E-20 1.9E-24 171.6 19.3 211 111-366 51-267 (366)
242 cd00610 OAT_like Acetyl ornith 99.8 3.2E-19 7E-24 171.2 23.5 253 76-363 50-332 (413)
243 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 5.1E-19 1.1E-23 167.3 24.5 256 79-364 9-271 (375)
244 PRK07505 hypothetical protein; 99.8 7.1E-19 1.5E-23 168.0 25.6 260 67-358 45-320 (402)
245 PRK08637 hypothetical protein; 99.8 3.1E-19 6.6E-24 169.7 22.3 166 111-283 44-242 (388)
246 PRK05367 glycine dehydrogenase 99.8 2.1E-18 4.5E-23 177.3 29.3 278 66-364 499-794 (954)
247 COG0399 WecE Predicted pyridox 99.8 7.8E-19 1.7E-23 161.6 23.1 253 79-366 13-271 (374)
248 PRK10534 L-threonine aldolase; 99.8 8.9E-20 1.9E-24 170.0 17.0 204 70-294 3-221 (333)
249 PF01041 DegT_DnrJ_EryC1: DegT 99.8 4.7E-19 1E-23 166.8 21.5 232 111-366 25-263 (363)
250 PRK03244 argD acetylornithine 99.8 1.3E-18 2.9E-23 166.0 25.0 246 77-363 58-322 (398)
251 KOG3846 L-kynurenine hydrolase 99.8 3.1E-19 6.7E-24 154.6 18.1 319 45-366 36-378 (465)
252 PLN02397 aspartate transaminas 99.8 3.6E-19 7.9E-24 170.8 20.6 269 66-363 48-355 (423)
253 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 3.5E-20 7.6E-25 172.9 12.1 225 110-366 65-323 (417)
254 COG2873 MET17 O-acetylhomoseri 99.8 1.1E-18 2.5E-23 155.2 20.8 167 110-289 61-229 (426)
255 PF01053 Cys_Met_Meta_PP: Cys/ 99.8 2.8E-19 6.1E-24 167.5 17.7 224 103-365 47-276 (386)
256 PRK01278 argD acetylornithine 99.8 1.8E-18 3.9E-23 164.6 23.4 255 67-362 30-313 (389)
257 PRK00854 rocD ornithine--oxo-a 99.8 2.9E-18 6.3E-23 163.9 24.6 247 76-363 55-327 (401)
258 PRK04073 rocD ornithine--oxo-a 99.8 3E-18 6.4E-23 163.4 24.3 257 66-363 38-326 (396)
259 TIGR03531 selenium_SpcS O-phos 99.8 2.8E-18 6.1E-23 162.7 23.1 226 109-363 103-344 (444)
260 KOG0256 1-aminocyclopropane-1- 99.8 4.5E-19 9.7E-24 159.2 16.2 238 41-287 49-322 (471)
261 TIGR00707 argD acetylornithine 99.8 3.3E-18 7.1E-23 162.4 22.6 246 76-363 41-309 (379)
262 cd00617 Tnase_like Tryptophana 99.8 1.7E-18 3.6E-23 164.6 20.3 219 113-363 55-310 (431)
263 TIGR03811 tyr_de_CO2_Ent tyros 99.8 1.4E-17 3E-22 163.2 25.9 276 70-363 86-475 (608)
264 KOG1360 5-aminolevulinate synt 99.8 1.8E-18 3.8E-23 154.7 17.5 277 51-363 155-446 (570)
265 PRK12566 glycine dehydrogenase 99.8 4.3E-18 9.2E-23 171.2 22.2 245 104-365 536-796 (954)
266 COG2008 GLY1 Threonine aldolas 99.8 1.7E-18 3.7E-23 154.8 14.9 258 70-368 3-276 (342)
267 PRK15407 lipopolysaccharide bi 99.8 1.7E-17 3.7E-22 159.0 22.3 164 113-288 65-239 (438)
268 PTZ00125 ornithine aminotransf 99.8 3.9E-17 8.5E-22 156.1 24.8 255 68-363 31-318 (400)
269 COG4992 ArgD Ornithine/acetylo 99.8 3.6E-17 7.8E-22 149.2 22.6 258 66-363 40-323 (404)
270 PRK02627 acetylornithine amino 99.8 2.8E-17 6E-22 156.9 23.1 246 77-362 54-320 (396)
271 PRK06434 cystathionine gamma-l 99.8 5.8E-18 1.3E-22 159.0 18.0 215 109-366 62-281 (384)
272 TIGR00461 gcvP glycine dehydro 99.8 8.7E-17 1.9E-21 162.8 24.5 282 69-368 67-365 (939)
273 COG0626 MetC Cystathionine bet 99.8 2E-17 4.4E-22 153.2 17.7 165 110-287 62-230 (396)
274 TIGR03246 arg_catab_astC succi 99.8 1.5E-16 3.3E-21 151.6 24.2 255 67-363 34-318 (397)
275 COG0112 GlyA Glycine/serine hy 99.8 3.5E-17 7.7E-22 147.3 18.4 265 68-367 28-306 (413)
276 KOG0053 Cystathionine beta-lya 99.8 2.1E-17 4.6E-22 151.2 15.9 168 111-291 77-248 (409)
277 PRK15029 arginine decarboxylas 99.7 1.1E-16 2.3E-21 159.9 19.7 223 111-365 205-466 (755)
278 PRK05093 argD bifunctional N-s 99.7 7.4E-16 1.6E-20 147.3 24.8 255 67-363 39-323 (403)
279 PF00464 SHMT: Serine hydroxym 99.7 5.4E-17 1.2E-21 151.0 16.1 268 67-366 21-321 (399)
280 PRK02936 argD acetylornithine 99.7 5.9E-16 1.3E-20 146.8 23.5 243 76-362 43-305 (377)
281 COG0160 GabT 4-aminobutyrate a 99.7 1.8E-15 3.9E-20 142.0 25.7 263 66-363 54-360 (447)
282 TIGR00713 hemL glutamate-1-sem 99.7 4.5E-16 9.8E-21 149.7 21.8 257 66-362 46-339 (423)
283 PRK04260 acetylornithine amino 99.7 1.9E-15 4.1E-20 143.2 25.5 247 76-361 43-306 (375)
284 PLN02624 ornithine-delta-amino 99.7 8.7E-16 1.9E-20 149.0 23.3 256 66-362 73-363 (474)
285 PRK12381 bifunctional succinyl 99.7 1E-15 2.2E-20 146.3 23.3 255 66-363 37-322 (406)
286 TIGR01885 Orn_aminotrans ornit 99.7 2.1E-15 4.5E-20 144.1 24.5 246 76-363 51-326 (401)
287 PRK13578 ornithine decarboxyla 99.7 2.7E-16 5.9E-21 155.5 16.6 233 112-366 175-442 (720)
288 PRK03715 argD acetylornithine 99.7 5.5E-15 1.2E-19 140.3 24.3 260 67-363 35-317 (395)
289 PF02347 GDC-P: Glycine cleava 99.7 1.4E-15 3E-20 142.1 19.6 282 69-365 68-366 (429)
290 TIGR02618 tyr_phenol_ly tyrosi 99.7 2.6E-15 5.7E-20 140.8 20.0 222 111-366 71-330 (450)
291 PRK08360 4-aminobutyrate amino 99.7 1.4E-14 3E-19 139.3 24.6 262 66-363 39-343 (443)
292 KOG0633 Histidinol phosphate a 99.7 2.7E-16 5.8E-21 133.5 10.8 249 65-366 40-302 (375)
293 TIGR03372 putres_am_tran putre 99.7 1.1E-14 2.3E-19 139.5 22.4 258 66-362 73-365 (442)
294 KOG1359 Glycine C-acetyltransf 99.7 2.3E-15 5E-20 130.0 15.8 258 66-367 67-338 (417)
295 PLN00144 acetylornithine trans 99.7 1E-14 2.3E-19 138.0 21.9 256 66-362 13-305 (382)
296 COG0001 HemL Glutamate-1-semia 99.7 1.2E-14 2.6E-19 134.2 21.5 254 67-363 52-342 (432)
297 KOG0634 Aromatic amino acid am 99.7 3.2E-15 6.9E-20 135.7 17.2 167 115-290 104-316 (472)
298 PRK08117 4-aminobutyrate amino 99.7 1.8E-14 3.9E-19 138.8 23.8 261 67-363 42-346 (433)
299 COG1932 SerC Phosphoserine ami 99.7 8.1E-15 1.8E-19 131.2 19.4 262 74-363 11-286 (365)
300 PRK05964 adenosylmethionine--8 99.7 1.2E-14 2.6E-19 139.6 21.6 269 66-363 40-346 (423)
301 KOG1368 Threonine aldolase [Am 99.7 5.9E-16 1.3E-20 133.8 10.9 207 68-291 23-246 (384)
302 TIGR02407 ectoine_ectB diamino 99.7 5.4E-14 1.2E-18 134.4 25.6 262 66-362 33-333 (412)
303 PF01212 Beta_elim_lyase: Beta 99.7 1E-16 2.2E-21 144.8 6.6 192 79-289 7-214 (290)
304 TIGR00700 GABAtrnsam 4-aminobu 99.7 3.6E-14 7.9E-19 136.1 24.5 262 66-362 31-335 (420)
305 PRK06777 4-aminobutyrate amino 99.7 3.4E-14 7.4E-19 136.1 23.4 263 66-363 38-337 (421)
306 PRK11522 putrescine--2-oxoglut 99.7 2.2E-14 4.7E-19 138.3 22.1 262 66-363 80-373 (459)
307 PRK09792 4-aminobutyrate trans 99.6 6.1E-14 1.3E-18 134.4 24.4 263 66-362 38-336 (421)
308 PRK06058 4-aminobutyrate amino 99.6 7.6E-14 1.6E-18 134.6 25.1 263 66-363 54-358 (443)
309 COG3977 Alanine-alpha-ketoisov 99.6 5.7E-15 1.2E-19 127.9 15.2 215 66-293 30-273 (417)
310 COG1003 GcvP Glycine cleavage 99.6 3.9E-14 8.5E-19 128.8 20.8 244 107-363 105-364 (496)
311 PRK09264 diaminobutyrate--2-ox 99.6 8.3E-14 1.8E-18 133.7 24.3 262 66-362 37-337 (425)
312 PRK04612 argD acetylornithine 99.6 6.1E-14 1.3E-18 133.6 21.8 260 66-363 38-326 (408)
313 PRK07495 4-aminobutyrate amino 99.6 1.5E-13 3.3E-18 131.6 24.6 264 66-363 38-337 (425)
314 KOG1383 Glutamate decarboxylas 99.6 3.7E-14 8E-19 130.0 18.8 241 108-367 117-377 (491)
315 COG0403 GcvP Glycine cleavage 99.6 4.8E-14 1E-18 128.3 19.3 284 69-364 78-379 (450)
316 PRK15400 lysine decarboxylase 99.6 1.1E-14 2.4E-19 144.1 16.5 222 112-365 196-444 (714)
317 PRK08593 4-aminobutyrate amino 99.6 4.1E-13 9E-18 129.4 26.3 264 66-363 40-346 (445)
318 PRK13237 tyrosine phenol-lyase 99.6 1.5E-13 3.2E-18 129.5 22.3 218 113-363 80-335 (460)
319 PLN02760 4-aminobutyrate:pyruv 99.6 8.8E-14 1.9E-18 135.4 21.4 271 66-363 87-407 (504)
320 PRK15399 lysine decarboxylase 99.6 5.2E-14 1.1E-18 139.4 19.7 220 112-365 196-444 (713)
321 PRK00062 glutamate-1-semialdeh 99.6 1E-13 2.2E-18 133.2 21.1 246 76-362 64-337 (426)
322 PLN02482 glutamate-1-semialdeh 99.6 2.2E-13 4.8E-18 131.5 23.1 253 67-363 98-387 (474)
323 PRK06541 hypothetical protein; 99.6 3.5E-13 7.5E-18 130.2 24.3 269 66-363 50-365 (460)
324 PRK12389 glutamate-1-semialdeh 99.6 4E-13 8.6E-18 129.1 24.5 257 66-363 51-341 (428)
325 PRK06918 4-aminobutyrate amino 99.6 3.6E-13 7.8E-18 130.3 24.3 263 66-363 52-358 (451)
326 PRK06062 hypothetical protein; 99.6 4.6E-13 9.9E-18 129.2 24.8 263 66-362 51-356 (451)
327 PRK13360 omega amino acid--pyr 99.6 5.3E-13 1.1E-17 128.4 25.1 272 66-363 44-362 (442)
328 PRK04013 argD acetylornithine/ 99.6 2.3E-13 4.9E-18 127.4 21.8 232 66-341 22-277 (364)
329 PRK07482 hypothetical protein; 99.6 3E-13 6.5E-18 130.8 23.1 271 66-363 48-367 (461)
330 PRK07046 aminotransferase; Val 99.6 4.4E-13 9.5E-18 129.2 23.8 257 66-362 73-363 (453)
331 PRK06105 aminotransferase; Pro 99.6 3.7E-13 8E-18 130.1 23.0 273 66-363 46-365 (460)
332 PRK08088 4-aminobutyrate amino 99.6 2.8E-13 6E-18 130.3 22.0 264 66-361 39-336 (425)
333 KOG1357 Serine palmitoyltransf 99.6 2.7E-14 5.9E-19 130.1 13.7 253 69-363 145-424 (519)
334 PRK00615 glutamate-1-semialdeh 99.6 5E-13 1.1E-17 128.0 23.0 258 66-362 51-341 (433)
335 PRK07678 aminotransferase; Val 99.6 7.3E-13 1.6E-17 127.9 23.5 268 66-362 45-358 (451)
336 TIGR00709 dat 2,4-diaminobutyr 99.6 1.4E-12 3.1E-17 125.7 25.4 263 66-363 37-344 (442)
337 PRK05965 hypothetical protein; 99.6 8E-13 1.7E-17 127.8 23.6 273 66-363 44-362 (459)
338 PF00202 Aminotran_3: Aminotra 99.6 5.1E-13 1.1E-17 124.4 20.9 259 66-362 14-315 (339)
339 PRK05769 4-aminobutyrate amino 99.6 3.5E-12 7.7E-17 122.8 27.2 262 66-363 52-358 (441)
340 PRK09221 beta alanine--pyruvat 99.6 1.1E-12 2.3E-17 126.4 23.5 272 66-363 47-365 (445)
341 PRK05639 4-aminobutyrate amino 99.5 2.2E-12 4.7E-17 124.6 24.8 262 66-363 51-360 (457)
342 COG1982 LdcC Arginine/lysine/o 99.5 1.5E-13 3.2E-18 131.1 16.2 223 112-365 71-314 (557)
343 PRK12403 putative aminotransfe 99.5 2.1E-12 4.5E-17 125.0 24.5 266 66-362 52-366 (460)
344 COG1921 SelA Selenocysteine sy 99.5 4.8E-13 1E-17 122.3 18.6 256 67-361 27-293 (395)
345 PRK06943 adenosylmethionine--8 99.5 1.7E-12 3.7E-17 125.2 23.5 271 66-363 52-368 (453)
346 PRK07481 hypothetical protein; 99.5 1.9E-12 4E-17 125.0 23.3 274 66-363 40-360 (449)
347 PRK07986 adenosylmethionine--8 99.5 1.2E-12 2.7E-17 125.2 21.3 270 66-363 41-350 (428)
348 PRK07030 adenosylmethionine--8 99.5 2.2E-12 4.7E-17 124.8 23.1 272 66-363 45-362 (466)
349 PRK06916 adenosylmethionine--8 99.5 1.8E-12 3.9E-17 125.4 22.4 272 66-363 54-371 (460)
350 PRK05630 adenosylmethionine--8 99.5 1.9E-12 4.2E-17 123.8 22.1 270 66-362 38-346 (422)
351 PRK06082 4-aminobutyrate amino 99.5 3.3E-12 7.1E-17 123.5 23.9 261 67-363 71-368 (459)
352 PRK06938 diaminobutyrate--2-ox 99.5 5.8E-12 1.3E-16 121.8 25.6 263 66-363 61-369 (464)
353 PRK07483 hypothetical protein; 99.5 4E-12 8.7E-17 122.4 23.5 268 66-362 28-343 (443)
354 PRK07480 putative aminotransfe 99.5 3.5E-12 7.6E-17 123.2 22.4 269 66-362 48-363 (456)
355 KOG1402 Ornithine aminotransfe 99.5 5.4E-12 1.2E-16 111.0 20.8 258 66-364 57-348 (427)
356 PRK07036 hypothetical protein; 99.5 3.3E-12 7E-17 123.7 21.5 273 66-363 49-368 (466)
357 PRK06917 hypothetical protein; 99.5 7E-12 1.5E-16 120.9 23.7 269 66-363 29-344 (447)
358 PRK06173 adenosylmethionine--8 99.5 5E-12 1.1E-16 121.2 22.2 270 66-363 42-352 (429)
359 PF03841 SelA: L-seryl-tRNA se 99.5 1.9E-14 4.1E-19 130.4 4.9 230 76-339 15-261 (367)
360 PRK08742 adenosylmethionine--8 99.5 9.4E-12 2E-16 120.4 23.3 269 66-360 62-380 (472)
361 PF12897 Aminotran_MocR: Alani 99.5 6.5E-13 1.4E-17 119.9 13.3 219 69-294 25-279 (425)
362 PRK12566 glycine dehydrogenase 99.5 3.6E-12 7.7E-17 129.0 20.1 282 68-368 81-379 (954)
363 PF06838 Met_gamma_lyase: Meth 99.5 2.2E-12 4.8E-17 115.8 16.4 175 110-291 53-246 (403)
364 KOG0258 Alanine aminotransfera 99.5 3.4E-13 7.3E-18 120.9 11.2 157 79-248 87-258 (475)
365 KOG0629 Glutamate decarboxylas 99.5 1.8E-12 3.9E-17 117.6 14.9 251 103-366 133-416 (510)
366 PRK06148 hypothetical protein; 99.5 1.4E-11 3.1E-16 129.3 23.7 262 66-363 622-925 (1013)
367 PRK06931 diaminobutyrate--2-ox 99.4 5.5E-11 1.2E-15 115.0 25.1 263 66-363 56-363 (459)
368 COG1448 TyrB Aspartate/tyrosin 99.4 6.8E-12 1.5E-16 113.1 17.1 262 69-363 35-332 (396)
369 TIGR00508 bioA adenosylmethion 99.4 2.4E-11 5.2E-16 116.6 21.4 268 68-363 45-353 (427)
370 PRK06149 hypothetical protein; 99.4 4.5E-11 9.8E-16 125.5 25.2 261 67-363 584-885 (972)
371 TIGR03251 LAT_fam L-lysine 6-t 99.4 7.9E-11 1.7E-15 113.3 24.0 257 76-358 52-357 (431)
372 KOG1401 Acetylornithine aminot 99.4 4.2E-11 9.1E-16 108.6 20.4 215 68-294 56-300 (433)
373 TIGR00699 GABAtrns_euk 4-amino 99.4 7.9E-11 1.7E-15 113.3 23.4 263 66-362 56-387 (464)
374 PRK06209 glutamate-1-semialdeh 99.4 4.9E-11 1.1E-15 114.7 21.5 257 66-362 46-328 (431)
375 COG0161 BioA Adenosylmethionin 99.4 1.7E-11 3.7E-16 114.8 15.3 270 66-362 42-359 (449)
376 PRK08297 L-lysine aminotransfe 99.4 1.7E-10 3.6E-15 111.3 22.1 268 67-363 44-365 (443)
377 KOG1358 Serine palmitoyltransf 99.3 4.7E-11 1E-15 107.5 15.3 261 65-365 93-377 (467)
378 TIGR02617 tnaA_trp_ase tryptop 99.3 1.2E-10 2.7E-15 108.7 18.2 255 69-363 42-344 (467)
379 PLN02974 adenosylmethionine-8- 99.3 1.2E-09 2.6E-14 111.4 23.4 268 69-360 366-732 (817)
380 KOG2467 Glycine/serine hydroxy 99.2 8.1E-10 1.8E-14 98.7 18.2 272 77-363 50-340 (477)
381 KOG2790 Phosphoserine aminotra 99.2 2.4E-09 5.2E-14 92.6 18.2 277 66-366 6-293 (370)
382 COG4100 Cystathionine beta-lya 99.2 6.6E-10 1.4E-14 96.9 13.2 171 113-291 67-257 (416)
383 KOG1404 Alanine-glyoxylate ami 99.2 1.8E-09 4E-14 97.5 16.2 260 66-364 48-353 (442)
384 KOG0628 Aromatic-L-amino-acid/ 99.1 4.1E-09 8.8E-14 97.1 16.2 177 105-285 107-319 (511)
385 KOG2040 Glycine dehydrogenase 98.9 2.3E-08 4.9E-13 95.6 15.0 237 107-364 578-837 (1001)
386 PF05889 SLA_LP_auto_ag: Solub 98.9 2.2E-09 4.8E-14 98.5 5.5 178 112-295 57-250 (389)
387 KOG1412 Aspartate aminotransfe 98.6 5.6E-07 1.2E-11 79.2 12.5 227 114-363 77-339 (410)
388 KOG2040 Glycine dehydrogenase 98.6 3.9E-07 8.5E-12 87.3 10.0 278 70-362 122-413 (1001)
389 COG3033 TnaA Tryptophanase [Am 98.5 1E-05 2.2E-10 72.9 16.9 200 66-285 44-283 (471)
390 KOG1403 Predicted alanine-glyo 98.5 1.8E-06 3.9E-11 75.7 11.2 261 67-363 46-351 (452)
391 PLN02994 1-aminocyclopropane-1 98.2 1.9E-05 4.2E-10 64.4 11.0 94 66-169 43-153 (153)
392 KOG1411 Aspartate aminotransfe 98.2 2.5E-05 5.5E-10 70.0 12.0 201 66-280 52-285 (427)
393 PF04864 Alliinase_C: Allinase 97.8 2.8E-05 6.1E-10 70.1 4.6 142 129-287 66-213 (363)
394 KOG2142 Molybdenum cofactor su 97.6 4.3E-05 9.3E-10 73.7 2.6 279 70-362 23-316 (728)
395 KOG3843 Predicted serine hydro 97.0 0.0024 5.2E-08 55.6 7.1 181 112-298 58-255 (432)
396 KOG1405 4-aminobutyrate aminot 97.0 0.067 1.5E-06 48.8 16.2 85 197-287 254-356 (484)
397 KOG2142 Molybdenum cofactor su 91.0 0.13 2.8E-06 50.6 1.9 170 116-291 181-367 (728)
398 TIGR03573 WbuX N-acetyl sugar 82.7 21 0.00046 33.3 11.6 122 113-248 42-170 (343)
399 COG0552 FtsY Signal recognitio 79.9 7 0.00015 36.0 7.0 144 137-286 151-310 (340)
400 COG1066 Sms Predicted ATP-depe 79.3 43 0.00094 32.0 11.9 139 138-285 106-273 (456)
401 COG0656 ARA1 Aldo/keto reducta 77.6 40 0.00086 30.5 11.0 155 70-242 16-187 (280)
402 KOG0630 Predicted pyridoxal-de 72.0 56 0.0012 31.8 10.7 111 174-285 245-376 (838)
403 COG1184 GCD2 Translation initi 71.7 81 0.0017 28.8 14.4 100 130-243 120-226 (301)
404 KOG1465 Translation initiation 68.2 96 0.0021 28.2 12.3 101 131-245 164-271 (353)
405 COG2102 Predicted ATPases of P 67.0 68 0.0015 27.8 9.4 126 131-271 3-146 (223)
406 PF01008 IF-2B: Initiation fac 60.7 1.3E+02 0.0028 27.1 11.9 101 130-244 108-216 (282)
407 TIGR02026 BchE magnesium-proto 59.6 68 0.0015 31.7 9.5 71 175-249 29-103 (497)
408 COG1105 FruK Fructose-1-phosph 57.2 71 0.0015 29.3 8.3 38 210-248 131-169 (310)
409 TIGR03600 phage_DnaB phage rep 57.2 74 0.0016 30.6 9.1 15 155-169 221-235 (421)
410 COG2099 CobK Precorrin-6x redu 54.8 22 0.00047 31.5 4.4 27 222-248 50-76 (257)
411 PF10087 DUF2325: Uncharacteri 54.6 84 0.0018 23.1 7.9 69 170-244 11-81 (97)
412 PF13407 Peripla_BP_4: Peripla 53.6 31 0.00068 30.1 5.6 69 170-243 16-85 (257)
413 KOG1577 Aldo/keto reductase fa 53.5 1.8E+02 0.0039 26.6 12.2 163 68-242 15-205 (300)
414 cd00984 DnaB_C DnaB helicase C 52.8 99 0.0021 26.8 8.6 50 194-243 104-168 (242)
415 COG1954 GlpP Glycerol-3-phosph 52.2 29 0.00062 28.7 4.4 51 197-252 12-64 (181)
416 PF05368 NmrA: NmrA-like famil 50.8 1.6E+02 0.0035 25.3 9.7 59 179-243 41-99 (233)
417 COG1587 HemD Uroporphyrinogen- 50.7 79 0.0017 27.9 7.6 127 130-270 52-185 (248)
418 PF02603 Hpr_kinase_N: HPr Ser 50.6 24 0.00052 27.7 3.8 38 200-243 73-110 (127)
419 COG2870 RfaE ADP-heptose synth 50.2 32 0.00069 32.6 5.0 84 158-246 92-179 (467)
420 PF04309 G3P_antiterm: Glycero 50.1 7.1 0.00015 32.5 0.7 51 197-252 8-60 (175)
421 cd05013 SIS_RpiR RpiR-like pro 49.9 1.2E+02 0.0025 23.3 8.6 34 205-242 58-91 (139)
422 TIGR02990 ectoine_eutA ectoine 49.9 1.8E+02 0.0039 25.6 10.3 99 137-247 106-214 (239)
423 smart00852 MoCF_biosynth Proba 48.6 1E+02 0.0022 24.2 7.2 50 168-220 17-69 (135)
424 PRK13396 3-deoxy-7-phosphohept 47.5 58 0.0013 30.5 6.3 125 110-252 151-285 (352)
425 COG2515 Acd 1-aminocyclopropan 47.5 1.7E+02 0.0036 26.9 8.9 119 131-251 65-193 (323)
426 TIGR00959 ffh signal recogniti 47.3 1.9E+02 0.0042 28.0 10.0 128 111-247 72-224 (428)
427 PF05378 Hydant_A_N: Hydantoin 46.0 1.7E+02 0.0038 24.3 9.0 41 195-238 130-176 (176)
428 PF02662 FlpD: Methyl-viologen 45.9 88 0.0019 24.4 6.3 56 183-238 27-90 (124)
429 PTZ00081 enolase; Provisional 45.4 1.9E+02 0.0041 28.1 9.7 101 137-244 282-382 (439)
430 PF07085 DRTGG: DRTGG domain; 45.1 1E+02 0.0022 22.9 6.5 50 183-243 41-90 (105)
431 TIGR01305 GMP_reduct_1 guanosi 44.8 1.7E+02 0.0036 27.3 8.7 72 195-267 158-241 (343)
432 PF08423 Rad51: Rad51; InterP 44.7 2.2E+02 0.0047 25.3 9.4 78 159-242 75-182 (256)
433 smart00642 Aamy Alpha-amylase 44.6 22 0.00048 29.3 2.8 29 220-248 65-93 (166)
434 cd00758 MoCF_BD MoCF_BD: molyb 44.4 90 0.0019 24.5 6.3 51 168-221 18-71 (133)
435 COG0074 SucD Succinyl-CoA synt 44.2 1.4E+02 0.0029 27.1 7.7 81 159-248 46-126 (293)
436 COG0108 RibB 3,4-dihydroxy-2-b 43.5 27 0.00059 29.6 3.2 32 211-242 158-189 (203)
437 PF03796 DnaB_C: DnaB-like hel 43.4 65 0.0014 28.5 6.0 48 196-243 112-175 (259)
438 TIGR00511 ribulose_e2b2 ribose 43.3 2.6E+02 0.0057 25.6 14.3 101 131-243 117-222 (301)
439 PRK13397 3-deoxy-7-phosphohept 43.1 86 0.0019 27.8 6.4 124 111-252 66-198 (250)
440 COG0300 DltE Short-chain dehyd 42.6 1.4E+02 0.003 26.8 7.7 84 132-222 8-98 (265)
441 PRK10886 DnaA initiator-associ 42.5 2.1E+02 0.0046 24.3 11.9 39 201-243 103-141 (196)
442 PRK08535 translation initiatio 42.1 2.8E+02 0.006 25.5 14.2 101 131-243 122-227 (310)
443 COG0157 NadC Nicotinate-nucleo 41.5 1.8E+02 0.0039 26.2 8.1 138 116-267 113-262 (280)
444 COG1606 ATP-utilizing enzymes 41.4 1.3E+02 0.0028 26.8 7.1 65 170-248 59-123 (269)
445 COG0352 ThiE Thiamine monophos 41.0 42 0.00091 29.0 4.1 49 198-246 24-73 (211)
446 PRK11070 ssDNA exonuclease Rec 40.8 3.8E+02 0.0083 27.1 11.3 104 134-248 51-161 (575)
447 cd06282 PBP1_GntR_like_2 Ligan 40.3 81 0.0018 27.4 6.1 69 167-241 14-82 (266)
448 PF02310 B12-binding: B12 bind 40.3 1.6E+02 0.0035 22.2 7.5 76 167-248 13-91 (121)
449 TIGR01362 KDO8P_synth 3-deoxy- 40.2 88 0.0019 27.8 5.9 119 110-250 59-187 (258)
450 COG0296 GlgB 1,4-alpha-glucan 39.9 27 0.00058 35.3 3.1 38 211-248 200-237 (628)
451 PRK14974 cell division protein 39.8 3.2E+02 0.0069 25.5 12.6 129 112-248 110-265 (336)
452 PF02571 CbiJ: Precorrin-6x re 39.7 33 0.00071 30.5 3.3 23 226-248 54-76 (249)
453 cd00886 MogA_MoaB MogA_MoaB fa 39.2 1.5E+02 0.0033 23.8 7.0 62 170-234 21-87 (152)
454 TIGR00177 molyb_syn molybdenum 39.1 1.3E+02 0.0029 23.9 6.6 49 170-221 28-79 (144)
455 PF04748 Polysacc_deac_2: Dive 38.3 2.1E+02 0.0046 24.7 8.1 91 140-242 106-206 (213)
456 COG0159 TrpA Tryptophan syntha 38.1 2.7E+02 0.0059 25.0 8.7 77 157-237 123-203 (265)
457 PRK00077 eno enolase; Provisio 37.9 2.8E+02 0.0061 26.8 9.7 86 155-243 275-361 (425)
458 PLN02672 methionine S-methyltr 37.7 3.6E+02 0.0077 29.7 11.0 119 115-247 430-566 (1082)
459 PRK12723 flagellar biosynthesi 37.6 2.5E+02 0.0055 26.8 9.1 86 156-248 205-298 (388)
460 PLN02556 cysteine synthase/L-3 37.1 2.9E+02 0.0062 26.1 9.4 85 131-222 113-197 (368)
461 KOG1546 Metacaspase involved i 37.1 2.5E+02 0.0054 25.9 8.3 57 112-169 86-150 (362)
462 cd01121 Sms Sms (bacterial rad 36.2 3.1E+02 0.0067 26.0 9.5 84 155-242 108-204 (372)
463 CHL00200 trpA tryptophan synth 36.0 3.2E+02 0.007 24.4 9.3 83 158-244 121-208 (263)
464 cd03313 enolase Enolase: Enola 35.7 2.8E+02 0.0061 26.6 9.3 98 139-243 264-361 (408)
465 cd06305 PBP1_methylthioribose_ 35.6 1.1E+02 0.0023 26.8 6.2 74 168-246 15-89 (273)
466 cd06292 PBP1_LacI_like_10 Liga 35.5 1.4E+02 0.0029 26.2 6.8 80 164-245 11-91 (273)
467 TIGR02634 xylF D-xylose ABC tr 35.5 1E+02 0.0023 27.8 6.1 73 165-242 11-83 (302)
468 COG0373 HemA Glutamyl-tRNA red 35.4 4.2E+02 0.009 25.6 15.1 87 140-247 188-275 (414)
469 cd06319 PBP1_ABC_sugar_binding 35.2 74 0.0016 27.9 5.1 72 168-244 15-87 (277)
470 PF00926 DHBP_synthase: 3,4-di 35.1 89 0.0019 26.6 5.1 34 208-242 152-185 (194)
471 cd01122 GP4d_helicase GP4d_hel 34.8 3.1E+02 0.0067 24.2 9.0 48 195-242 122-185 (271)
472 cd01542 PBP1_TreR_like Ligand- 34.8 1.1E+02 0.0023 26.5 6.0 46 170-215 17-62 (259)
473 cd00885 cinA Competence-damage 34.7 1.3E+02 0.0028 24.9 6.0 71 170-246 20-93 (170)
474 PF00128 Alpha-amylase: Alpha 34.5 28 0.00061 31.3 2.2 32 217-248 44-75 (316)
475 PRK06372 translation initiatio 34.4 3.4E+02 0.0073 24.2 15.4 97 131-243 88-190 (253)
476 PRK09441 cytoplasmic alpha-amy 34.4 35 0.00075 33.6 2.9 29 218-246 74-102 (479)
477 PRK05595 replicative DNA helic 34.3 1.7E+02 0.0038 28.3 7.7 48 196-243 294-356 (444)
478 TIGR01060 eno phosphopyruvate 34.1 3.2E+02 0.0069 26.4 9.4 82 158-242 279-361 (425)
479 cd01455 vWA_F11C1-5a_type Von 34.1 1.1E+02 0.0023 26.0 5.4 34 210-243 114-147 (191)
480 cd06318 PBP1_ABC_sugar_binding 34.1 87 0.0019 27.6 5.3 74 167-245 14-88 (282)
481 PRK12595 bifunctional 3-deoxy- 33.8 2.3E+02 0.005 26.7 8.1 122 111-251 169-300 (360)
482 PLN03013 cysteine synthase 33.3 1.8E+02 0.0039 28.2 7.4 83 131-220 177-259 (429)
483 PRK03673 hypothetical protein; 33.2 1.2E+02 0.0027 28.9 6.2 71 170-246 22-95 (396)
484 TIGR02667 moaB_proteo molybden 33.0 2.3E+02 0.005 23.2 7.2 65 169-236 22-91 (163)
485 TIGR00064 ftsY signal recognit 32.9 2.7E+02 0.0058 25.0 8.2 89 155-247 98-202 (272)
486 PRK08057 cobalt-precorrin-6x r 32.8 47 0.001 29.5 3.2 29 131-164 4-32 (248)
487 KOG3974 Predicted sugar kinase 32.5 1.2E+02 0.0026 27.1 5.5 62 179-246 74-140 (306)
488 PRK13125 trpA tryptophan synth 31.9 3.5E+02 0.0077 23.7 9.6 84 158-245 103-192 (244)
489 PF04273 DUF442: Putative phos 31.7 1.2E+02 0.0025 23.2 4.8 47 194-240 13-59 (110)
490 TIGR00268 conserved hypothetic 31.7 3.3E+02 0.0072 24.0 8.5 98 131-248 15-117 (252)
491 PRK00771 signal recognition pa 31.6 4.9E+02 0.011 25.3 13.8 130 111-248 69-218 (437)
492 PF13481 AAA_25: AAA domain; P 31.4 77 0.0017 26.3 4.3 45 198-242 129-183 (193)
493 KOG1138 Predicted cleavage and 31.3 1.4E+02 0.003 29.3 6.1 80 131-219 392-477 (653)
494 cd01575 PBP1_GntR Ligand-bindi 30.8 1.7E+02 0.0038 25.3 6.7 47 170-216 17-63 (268)
495 KOG1467 Translation initiation 30.8 5.3E+02 0.011 25.4 11.5 104 130-245 360-468 (556)
496 cd06299 PBP1_LacI_like_13 Liga 30.6 1.7E+02 0.0036 25.4 6.5 48 169-216 16-63 (265)
497 PRK06015 keto-hydroxyglutarate 30.5 2.7E+02 0.0059 23.8 7.3 41 195-244 63-103 (201)
498 cd06324 PBP1_ABC_sugar_binding 30.3 1.4E+02 0.0031 26.8 6.2 72 169-246 17-91 (305)
499 PRK05096 guanosine 5'-monophos 30.3 3E+02 0.0065 25.7 7.9 51 197-247 161-222 (346)
500 TIGR03590 PseG pseudaminic aci 30.2 4E+02 0.0088 23.8 9.4 64 176-246 47-112 (279)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-50 Score=380.83 Aligned_cols=316 Identities=52% Similarity=0.793 Sum_probs=297.0
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 128 (368)
..+|++||.+.... +.+.+|||+++.++.|..|.+++.+++..++.|++++.+..+....+.+++.|+.+++++|+++
T Consensus 6 ~~~r~~fp~l~~~~--~~~~vylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~ 83 (405)
T COG0520 6 AAVRADFPALKREV--GKPLVYLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADS 83 (405)
T ss_pred HHHHhhCHHHhhcc--CCCeEEecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34889999885543 2568999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
.++|+||.|+|+++++++.+++.. +++||+|++++.+|+++..+|..++++.|++++.+|+++++.++.+.++..++++
T Consensus 84 ~~eIvft~~tT~aln~va~~l~~~-~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~~~~~~~i~~~ 162 (405)
T COG0520 84 SDEIVFTRGTTEALNLVARGLGRS-LKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPK 162 (405)
T ss_pred CCeEEEeCChhHHHHHHHHHhhhh-hcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCCCCCcCHHHHHHhcCCC
Confidence 459999999999999999998432 7899999999999999999999999999999999999989999999999999999
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEccccc
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLL 287 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li 287 (368)
|++|.+++.+|.||.+.|+++|+++||++|+++++|++|+.|+.++|+.++++||+++|.|| ++||.|+|+++++++++
T Consensus 163 Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l 242 (405)
T COG0520 163 TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELL 242 (405)
T ss_pred ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccccCCCceEEEEEchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 88999999999999999
Q ss_pred ccCCCcccCCcceeeccc-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 288 SAMPPFLGGGEMISDVFL-DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+.+.|...||+....+.. ....+.....+|+.||+++.+.+++.+++++++++|++.+.+|.++|.+++.+.|.+++++
T Consensus 243 ~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v 322 (405)
T COG0520 243 EELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGV 322 (405)
T ss_pred hhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 999999999999888776 5577788899999999999999999999999999999999999999999999999999886
Q ss_pred C
Q 017640 367 T 367 (368)
Q Consensus 367 t 367 (368)
+
T Consensus 323 ~ 323 (405)
T COG0520 323 E 323 (405)
T ss_pred E
Confidence 5
No 2
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=3.6e-46 Score=358.43 Aligned_cols=323 Identities=78% Similarity=1.158 Sum_probs=284.7
Q ss_pred ccchhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH
Q 017640 44 SVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF 123 (368)
Q Consensus 44 ~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~ 123 (368)
+..|+..+|.+||.++.... +++.+|||+++.+++|+.+.+++.+++..+..+++.+.+..+....+.++++|+.++++
T Consensus 10 ~~~~~~~~r~~fp~~~~~~~-~~~~iyLd~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~ 88 (424)
T PLN02855 10 SVSLGAETRPDFPILDQTVN-GSKLVYLDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAF 88 (424)
T ss_pred HHHHHHHHHHhCchhccccC-CCCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHH
Confidence 34678889999998843211 24689999999999999999999999988877777666666666677889999999999
Q ss_pred cCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHH
Q 017640 124 INASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 124 ~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~ 203 (368)
+|++++++|++|+|+|++++.++.++....+++||+|++++++|++.+..+..+++..|++++.+++++++.+|++++++
T Consensus 89 ~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~~~~~~l~~ 168 (424)
T PLN02855 89 INASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEVLDVEQLKE 168 (424)
T ss_pred cCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCCcCHHHHHH
Confidence 99975459999999999999999875332378999999999999999988999888999999999998778899999999
Q ss_pred hcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEc
Q 017640 204 MLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGK 283 (368)
Q Consensus 204 ~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~ 283 (368)
.+++++++|++++++|+||.++|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||+|+|+++++
T Consensus 169 ~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~ 248 (424)
T PLN02855 169 LLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKMCGPTGIGFLWGK 248 (424)
T ss_pred HhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccccCCCccEEEEEc
Confidence 99999999999999999999999999999999999999999999999998888888999999999999999999999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.++|+..||+.....+.+...+.+.+.||+.||+++.+++++..+++++.++|++++++|+.++.+++++.|.++
T Consensus 249 ~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~ 328 (424)
T PLN02855 249 SDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEKLSSV 328 (424)
T ss_pred hhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999988777765544444445556678999999999999999999999999999999999999999999999888
Q ss_pred cCCC
Q 017640 364 HNTT 367 (368)
Q Consensus 364 ~g~t 367 (368)
+|++
T Consensus 329 ~g~~ 332 (424)
T PLN02855 329 PGVR 332 (424)
T ss_pred CCEE
Confidence 7754
No 3
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=5.9e-46 Score=355.08 Aligned_cols=318 Identities=47% Similarity=0.785 Sum_probs=279.0
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 128 (368)
+.+|++||.+..... +.+++|||+++.+++|+.+++++.+++.....+++.+.+..+....+.++++|+.+++++|+.+
T Consensus 6 ~~~r~~fp~~~~~~~-~~~~iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 84 (406)
T PRK09295 6 EKVRADFPVLSREVN-GLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARS 84 (406)
T ss_pred HHHHhhCccccCcCC-CCceEEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 457899999853211 2368999999999999999999999998877777766777777788899999999999999854
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
+++|+||+|+|++++.++.++....+++||+|++++++|++.+..|...++..|++++.++.++++.+|+++|+++++++
T Consensus 85 ~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~ 164 (406)
T PRK09295 85 AEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALFDER 164 (406)
T ss_pred CCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCCCHHHHHHhcCCC
Confidence 45999999999999999987633237899999999999999998899888889999999999888889999999999999
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
+++|++++++|+||.++|+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||.|+|++++++++++
T Consensus 165 t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~ 244 (406)
T PRK09295 165 TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQ 244 (406)
T ss_pred cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhccCCCCcEEEEEchHhHh
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999998
Q ss_pred cCCCcccCCcceeeccc-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 289 AMPPFLGGGEMISDVFL-DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.++|...|++....... ....+.+...||+.||+++.+++++.++++++.+.|++.+++|.+++.+++.+.|.+++|++
T Consensus 245 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 324 (406)
T PRK09295 245 EMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLT 324 (406)
T ss_pred hCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 88887766554332221 23445566789999999999999999999999999999999999999999999999887754
No 4
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=4.1e-45 Score=348.93 Aligned_cols=312 Identities=40% Similarity=0.659 Sum_probs=276.1
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 128 (368)
..+|++||.+. ++.+|||+++.+++|+.+.+++++++..+..+++.+.+..+..+.+.++++|+.+++++|+++
T Consensus 7 ~~~r~~fp~l~------~~~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~ 80 (401)
T PRK10874 7 AQFRAQFPALQ------DAGVYLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPD 80 (401)
T ss_pred HHHHHhCCCcC------CceEEEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 56899999772 568999999999999999999999999888888776777777788999999999999999954
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
+++|++|+|+|+++++++.++....+++||+|++++++|++.+..|...++..|++++.++.+.++.+|+++++++++++
T Consensus 81 ~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~ 160 (401)
T PRK10874 81 AKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELITPR 160 (401)
T ss_pred CCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCCCcCCHHHHHHhcCcC
Confidence 45999999999999999998732236899999999999999988898888999999999999888889999999999999
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
+++|++++++|+||.+.|+++|.++|+++|+++++|++|+.+..++++...++|++++|+||+|||+|+|++++++++++
T Consensus 161 t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~ 240 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKLYGPTGIGVLYGKSELLE 240 (401)
T ss_pred cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccccCCCccEEEEEchHHHh
Confidence 99999999999999999999999999999999999999999988888877889999999999999999999999999999
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+.++..|+................+.+|+.||+|+.+++++..+++++.+.|..+++++..++++++.+.|.+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~ 318 (401)
T PRK10874 241 AMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALAKLPGF 318 (401)
T ss_pred cCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 998887655443222222233344668999999999999999999999999999999999999999999999988765
No 5
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=3.8e-45 Score=348.82 Aligned_cols=313 Identities=42% Similarity=0.667 Sum_probs=273.8
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 128 (368)
+.+|++||.+. ++.+|||+++.+++|+.+.+++.+++.....+++.+.+..+....+.++++|+.+++++|+++
T Consensus 4 ~~~r~~fp~l~------~~~iyld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~ 77 (398)
T TIGR03392 4 AQFRQQFPALQ------DGTVYLDSAATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPD 77 (398)
T ss_pred hHHHHhCCccC------CCeEEeeCccccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 45799999772 468999999999999999999999998777787766666667778889999999999999964
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
+++|++|+|+|++++.++.++....+++||+|++++++|++.+..+...++..|++++.++.++++.+|++.++++++++
T Consensus 78 ~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 78 AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTPR 157 (398)
T ss_pred CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHHhccC
Confidence 45999999999999999998732226899999999999999888888888899999999999888889999999999999
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
+++|++++++||||.+.|+++|.++|+++|+++++|++|+.+..++++..+++|++++|+||++||.|+|++++++++++
T Consensus 158 t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~~~ 237 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKLYGPTGIGVLYGKTELLE 237 (398)
T ss_pred ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccccCCCceEEEEEcHHHHh
Confidence 99999999999999999999999999999999999999999988888877889999999999999999999999999998
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+.++..|+............+...+.+|+.||+++.+++++.++++++.+.|.++++++..++++++.+.|.+++|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~ 316 (398)
T TIGR03392 238 AMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFR 316 (398)
T ss_pred hCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 8888765443322221222334456689999999999999999999999999999999999999999999999887753
No 6
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=8.7e-44 Score=340.12 Aligned_cols=317 Identities=57% Similarity=0.934 Sum_probs=277.3
Q ss_pred hhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC
Q 017640 50 ITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS 129 (368)
Q Consensus 50 ~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~ 129 (368)
.+|.+||.++.... +.+++|||+++.+++|+.+.+++.+++.....+++.+.+..+..+.+.++++|+.+++++|++++
T Consensus 2 ~~~~~f~~~~~~~~-~~~~~yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~ 80 (403)
T TIGR01979 2 NIRADFPILKRKIN-GKPLVYLDSAATSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD 80 (403)
T ss_pred chhhhCchhcCCCC-CCceEEEeCccccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC
Confidence 46889998854322 45789999999999999999999999888777777655566666778899999999999999844
Q ss_pred CcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc
Q 017640 130 GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT 209 (368)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~ 209 (368)
++|++|+|+|+++.+++.++....+++||+|++++++|++....+..+++..|++++.++.++++.+|++++++++++++
T Consensus 81 ~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~ 160 (403)
T TIGR01979 81 EEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEKLLTEKT 160 (403)
T ss_pred CeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCCCCCCHHHHHHHhccCC
Confidence 59999999999999999876332367899999999999999888888888899999999999889999999999999999
Q ss_pred eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEccccccc
Q 017640 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~ 289 (368)
++|++++++|+||.++|+++|.++|++||+++++|++|+.|..++++...++|++++|+||++||.|+|++++++++++.
T Consensus 161 ~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~ 240 (403)
T TIGR01979 161 KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKMYGPTGIGVLYGKEELLEQ 240 (403)
T ss_pred eEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccccCCCCceEEEEchHHHhc
Confidence 99999999999999999999999999999999999999999988888888999999999999999999999999999988
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
++|...||............+.....+|+.||+++.+++++..+++++.+.|.++++++..++++++.+.|.+++|++
T Consensus 241 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~ 318 (403)
T TIGR01979 241 MPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLR 318 (403)
T ss_pred CCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 988887776544332223344556678999999999999999999999999999999999999999999998877654
No 7
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=314.27 Aligned_cols=279 Identities=29% Similarity=0.428 Sum_probs=258.1
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
.||||+++.+++.+.+.+++..++...++||++ .|..|....+.+++.|+.+|+++|+++ ++|+||+|+||++++++.
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~-~eIiFTSG~TEsnNlaI~ 79 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADP-EEIIFTSGATESNNLAIK 79 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCC-CeEEEecCCcHHHHHHHH
Confidence 489999999999999999999999999999985 899999999999999999999999998 599999999999999999
Q ss_pred H--ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 148 S--WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 148 ~--~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
+ +....-++|.+|+++..+|+++....+.+ +..|.+|.+++++.+|.+|+++|+++|+++|.+|.+.+.+|.+|.+.
T Consensus 80 g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQ 158 (386)
T COG1104 80 GAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQ 158 (386)
T ss_pred hhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCCCCCCeEcHHHHHHhcCCCceEEEEEecccCeeecc
Confidence 8 32212246889999999999999998888 77899999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeeccc
Q 017640 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL 305 (368)
Q Consensus 226 ~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~ 305 (368)
|+++|.++|+++|+++++|++|++|.+|+|+..++.|++++|.||++||.|+|++++++.. .+.|.+.||++
T Consensus 159 pI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~--~~~p~i~GGgQ------ 230 (386)
T COG1104 159 PIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHKFGGPKGIGALYVRPGV--RLEPLIHGGGQ------ 230 (386)
T ss_pred cHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhhccCCCceEEEEECCCC--ccCceeccCcC------
Confidence 9999999999999999999999999999999999999999999999999999999998877 78899999988
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh-cCC
Q 017640 306 DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER-HNT 366 (368)
Q Consensus 306 ~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~-~g~ 366 (368)
++.+.+||.|+++++++..|++...+ .++...++...|.+++.+.|.+. +++
T Consensus 231 --------E~g~RsGTenv~~Ivg~~~A~~~a~~-~~~~~~~~~~~lr~~l~~~l~~~~p~~ 283 (386)
T COG1104 231 --------ERGLRSGTENVPGIVGFGKAAEIAVE-ELEEENARLRKLRDRLEDGLLEIIPDV 283 (386)
T ss_pred --------CCCCCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCcE
Confidence 36788999999999999999998777 47888899999999999999865 543
No 8
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=100.00 E-value=1.3e-42 Score=328.38 Aligned_cols=298 Identities=36% Similarity=0.552 Sum_probs=265.9
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
||||+++.+++|+.|++++.+++.....+++.+.+..+..+.+.++++|+.+++++|++++++|+|++|+|++++.++.+
T Consensus 1 iYld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~ 80 (371)
T PF00266_consen 1 IYLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASS 80 (371)
T ss_dssp EEEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHH
T ss_pred CEeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhc
Confidence 79999999999999999999999999999877777778888999999999999999999845999999999999999999
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
+.. .+++|++|++.+.+|++...++..++++.|++++.++.+.++.+|+++++++|++++++|++++.+|.||.+.|++
T Consensus 81 l~~-~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~ 159 (371)
T PF00266_consen 81 LLN-PLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIE 159 (371)
T ss_dssp HHH-HGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHH
T ss_pred ccc-ccccccccccccccccccccccccccccchhhhccccccccchhhhhhhhhhhccccceEEeecccccccEEeeec
Confidence 732 1689999999999999999999999989999999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~ 308 (368)
+|.++||++|+++++|++|++|..++|++++++|++++|.||++||+|+|+++++++++++++|...||+..........
T Consensus 160 ~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~Kl~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~ 239 (371)
T PF00266_consen 160 EIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHKLGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEY 239 (371)
T ss_dssp HHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTSTTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHH
T ss_pred eehhhhhccCCceeEechhccccccccccccccceeeecccccCCCCchhhheehhhhhhccccccccccccccccchhc
Confidence 99999999999999999999999999999999999999999988999999999999999999988888875443333223
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+.....+|+.||+++..++++..+++++.+.|++++++|..++.+++.+.|.++++.+
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~ 298 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIE 298 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCcee
Confidence 34456688999999999999999999999999999999999999999999999987643
No 9
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=7.6e-41 Score=315.34 Aligned_cols=282 Identities=28% Similarity=0.351 Sum_probs=250.2
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
+|||+++.+++|+.+.+++.+++.....+|+.+.+..+..+.+.++++|+.+++++|++++ +|+||+|+|++++.++.+
T Consensus 1 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~t~~~t~a~~~~l~~ 79 (364)
T PLN02651 1 LYLDMQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-EIIFTSGATESNNLAIKG 79 (364)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHH
Confidence 5999999999999999999999887777777545555666788899999999999999764 899999999999988776
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
+.....++||+|++.+.+|+++...+..+ +..|++++.++.++++.+|+++++++++++++++++++++|+||.+.|++
T Consensus 80 ~~~~~~~~g~~vl~~~~~h~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~ 158 (364)
T PLN02651 80 VMHFYKDKKKHVITTQTEHKCVLDSCRHL-QQEGFEVTYLPVKSDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVE 158 (364)
T ss_pred HHHhccCCCCEEEEcccccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHH
Confidence 52222578999999999999988777665 46799999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~ 308 (368)
+|.++||+||+++++|++|+.|..++++..+++|++++|.||++||.|+|+++++++.+..+.|...||+.
T Consensus 159 ~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~~gp~G~g~l~v~~~~~~~l~p~~~g~~~--------- 229 (364)
T PLN02651 159 EIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKIYGPKGVGALYVRRRPRVRLEPLMSGGGQ--------- 229 (364)
T ss_pred HHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhhCCCCceEEEEEcCCCCCCCCccccCCCc---------
Confidence 99999999999999999999999999999999999999999998999999999999998889888877654
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-hcCCC
Q 017640 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE-RHNTT 367 (368)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~g~t 367 (368)
+.+++.||+|+.+++++.++++++.+ +.+++++|.++|.+++.+.|.+ ++|++
T Consensus 230 -----~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~ 283 (364)
T PLN02651 230 -----ERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVR 283 (364)
T ss_pred -----cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEE
Confidence 24677999999999999999999997 4599999999999999999985 45654
No 10
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=100.00 E-value=1.4e-39 Score=308.05 Aligned_cols=295 Identities=56% Similarity=0.881 Sum_probs=264.6
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
+|||+++.+++|+.+.+++++++.....+|+++.+..+....+...++|+.+++++|.++++++++|+|+|+++.+++.+
T Consensus 1 ~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~ 80 (373)
T cd06453 1 VYLDNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYG 80 (373)
T ss_pred CcccCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHH
Confidence 59999999999999999999999888888877777777888899999999999999998445899999999999999999
Q ss_pred ccCCCCC---CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 149 WGLSNLK---SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 149 ~~~~~~~---~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
+ .. +||+|++++++|++.+..+...++..|++++.|+.+.++.+|++++++++.+++++|++++++||||.+.
T Consensus 81 l----~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~ 156 (373)
T cd06453 81 L----GRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTERTKLVAVTHVSNVLGTIN 156 (373)
T ss_pred h----hhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCCCCcCHHHHHHHhcCCceEEEEeCcccccCCcC
Confidence 8 34 8999999999999988778888778899999999988888999999999998999999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeeccc
Q 017640 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL 305 (368)
Q Consensus 226 ~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~ 305 (368)
|+++|.++|++||+++++|++|+.+..++++...++|++++|+||+++++|+|++++++++++.+++...||........
T Consensus 157 ~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 236 (373)
T cd06453 157 PVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEEVSF 236 (373)
T ss_pred CHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEeccccccCCCCcEEEEEchHHhhcCCCeecCCCccccccc
Confidence 99999999999999999999999998888877788999999999998888899999999999999988777665444333
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 306 DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 306 ~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+...+.....+|+.||+++..++++..+++++.+.|++.+.++..++++++.+.+.++++++
T Consensus 237 ~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~ 298 (373)
T cd06453 237 EETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVR 298 (373)
T ss_pred cccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 44556667778999999999999999999999999999999999999999999999887654
No 11
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=295.98 Aligned_cols=273 Identities=37% Similarity=0.496 Sum_probs=239.3
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+.+.+|||.++++++++.|.+++..++..++.|||.. ..+......+++.|+.+|+++|+++. +|+||+|+|+++++
T Consensus 41 ~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~-dIiFts~ATEs~Nl 117 (428)
T KOG1549|consen 41 GTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPS-DIVFTSGATESNNL 117 (428)
T ss_pred CCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCC-cEEEeCCchHHHHH
Confidence 4688999999999999999999999999999999975 34445566689999999999999987 59999999999999
Q ss_pred HHHHccCCCCCCCC----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccc
Q 017640 145 VAYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 145 ~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
++.++. +..+| +|++...+|+++...++.+ +..|.+++++|++.++.+|.+.+++.|+++|++|.+.+.+|.
T Consensus 118 vl~~v~---~~~~~~~~k~iitl~~eH~~v~~s~~~l-~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~ 193 (428)
T KOG1549|consen 118 VLKGVA---RFFGDKTKKHIITLQTEHPCVLDSCRAL-QEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNE 193 (428)
T ss_pred HHHHhh---ccccccccceEEEecccCcchhHHHHHH-HhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccC
Confidence 999995 44555 8999999999999988877 455899999999988999999999999999999999999999
Q ss_pred cccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEccccccc--CCCcccCCc
Q 017640 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA--MPPFLGGGE 298 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~--l~~~~~g~~ 298 (368)
+|++.|++||.++|+++|+++++|+||+.|.+++|+.++++|+++.|.||+|||+|+|+++++++ ... +.|.+.||+
T Consensus 194 ~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~~-~~~~~~~p~~~GGg 272 (428)
T KOG1549|consen 194 IGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIYGPPGIGALYVRRK-RPRLRVEPPLSGGG 272 (428)
T ss_pred ccccccHHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeecccccCCCcceEEEEccC-CCcccccCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999982 233 347777777
Q ss_pred ceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
.. +.++.||.+.+..+++..+.++..+. +..+..+..++...+...+
T Consensus 273 q~--------------r~~rsGT~~~~~~~~~gsA~e~~~~~-~~~~~~~~~~~~~~ll~~i 319 (428)
T KOG1549|consen 273 QE--------------RGLRSGTVATPLAVGLGSAAEFVNKE-MAYDEAIIKRLSEKLLMGI 319 (428)
T ss_pred cc--------------cccccCCcCchhhhhhHHHHHHHHhh-cchhHHHHHHHHHHHHHHH
Confidence 74 67899999999999999999999885 3334444444555555555
No 12
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=100.00 E-value=3.3e-38 Score=301.12 Aligned_cols=282 Identities=27% Similarity=0.346 Sum_probs=246.0
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
.+|||+++.+++++.+++++.+++.....+++...+..+....+.++++|+.+++++|++++ +|+||+|+|++++.++.
T Consensus 4 ~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~ 82 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-EIVFTSGATESNNLAIK 82 (402)
T ss_pred cEEeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHH
Confidence 58999999999999999999998876667776444444445567889999999999999764 89999999999999987
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCH
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (368)
++.....++||+|+++.++|+++...+..+ +..|++++.++.++++.+|++.+++++++++++|++++++|+||.+.|+
T Consensus 83 ~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~ 161 (402)
T TIGR02006 83 GIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFEVTYLPPKSNGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDI 161 (402)
T ss_pred HHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECCCcCceecccH
Confidence 762112468999999999999988776654 5569999999998889999999999999899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
++|.++|+++|+++++|++|+.|..++++...++|++++|+||++||.|+|+++++++....+.|...|++.
T Consensus 162 ~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~gp~G~G~l~~~~~~~~~~~~~~~g~~~-------- 233 (402)
T TIGR02006 162 AAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALIHGGGH-------- 233 (402)
T ss_pred HHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhcCCCceEEEEEccCCCCCCCceecCCCc--------
Confidence 999999999999999999999999999998889999999999999999999999998877777777665443
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..+++.||+++..++++..++++++. +++.+.++..++.+++.+.|.+++++
T Consensus 234 ------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~v 285 (402)
T TIGR02006 234 ------ERGMRSGTLPTHQIVGMGEAFRIAKE-EMAQDTAHVLALRDRLLNGIKSIEEV 285 (402)
T ss_pred ------cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 24678899999999999999999886 68899999999999999999887664
No 13
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=4.5e-38 Score=300.19 Aligned_cols=298 Identities=35% Similarity=0.533 Sum_probs=254.4
Q ss_pred hhhcCCCCcccccccCCCC-eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC
Q 017640 49 HITRPDFPILHQEVYGSKK-LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~-~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~ 127 (368)
+.+|.+||.+. ++ .+|||+++.+++|+.+++++.+++.....++. +.+.......+..+++|+.+++++|++
T Consensus 4 ~~~r~~f~~~~------~~~~~yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ia~~~~~~ 76 (397)
T TIGR01976 4 EAVRGQFPALA------DGDRVFFDNPAGTQIPQSVADAVSAALTRSNANRG-GAYESSRRADQVVDDAREAVADLLNAD 76 (397)
T ss_pred hHHHhhCCcCC------CCCeEEecCCccCCCCHHHHHHHHHHHHhcCCCCC-CCchHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45789999872 33 69999999999999999999999877655543 233334455678899999999999998
Q ss_pred CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcc
Q 017640 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLS 206 (368)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~ 206 (368)
++ +|++++|+++++..++.++.. .+++||+|++.+++|++++..+...++..|++++.+++++ ++.+|+++++++++
T Consensus 77 ~~-~v~~~~~~t~~l~~~~~~~~~-~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~ 154 (397)
T TIGR01976 77 PP-EVVFGANATSLTFLLSRAISR-RWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLS 154 (397)
T ss_pred CC-eEEEeCCHHHHHHHHHHHHHh-cCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcC
Confidence 65 799999999999888777521 2689999999999999998888888888999999999875 68899999999999
Q ss_pred cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccc
Q 017640 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDL 286 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~l 286 (368)
+++++|++++++|+||.+.|+++|.++|++||+++++|++|+.+..++++.++++|++++|+||++|+. +|++++++++
T Consensus 155 ~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~l~~~~~~ 233 (397)
T TIGR01976 155 PRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFFGPH-MGILWGRPEL 233 (397)
T ss_pred CCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhcCCc-eEEEEEcHHH
Confidence 899999999999999999999999999999999999999999888878887789999999999999875 8999999999
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC--------------HHHHHHHHHHH
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG--------------MQKIHAYEVKW 352 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g--------------~~~i~~~~~~l 352 (368)
++.+.+....+ .+.....+|+.||+++..++++..+++++.+.| .+.++++..++
T Consensus 234 ~~~l~~~~~~~-----------~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l 302 (397)
T TIGR01976 234 LMNLPPYKLTF-----------SYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRL 302 (397)
T ss_pred HhhCCCccccC-----------ccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHH
Confidence 88887665322 123345689999999999999999999998876 67888999999
Q ss_pred HHHHHHHHHhhcCCC
Q 017640 353 IICSIIVIQERHNTT 367 (368)
Q Consensus 353 ~~~l~~~l~~~~g~t 367 (368)
.+++++.|.++.+++
T Consensus 303 ~~~l~~~L~~~~~~~ 317 (397)
T TIGR01976 303 AEYLLVGLSDLPGVT 317 (397)
T ss_pred HHHHHHHHhcCCCEE
Confidence 999999998875543
No 14
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=100.00 E-value=7.3e-38 Score=296.60 Aligned_cols=291 Identities=31% Similarity=0.489 Sum_probs=248.1
Q ss_pred EEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
+|||+++.+ ++|+.+.+++.+++..+..+++.+.+.......+..+++|+.+++++|++..++|++|+|+|+++.+++.
T Consensus 1 ~yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~ 80 (376)
T TIGR01977 1 IYFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALK 80 (376)
T ss_pred CCccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHH
Confidence 599998877 7889999999999887654554433433344567888999999999999765589999999999999999
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCH
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (368)
++ +++||+|++.+++|+++...+..+++..|.+++.++.++++.+|++++++++++++++|++++++||||.++|+
T Consensus 81 ~~----~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~ 156 (376)
T TIGR01977 81 GL----LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEGLISPERIKRAIKTNTKLIVVSHASNVTGTILPI 156 (376)
T ss_pred hc----cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCCCcCHHHHHHhcCCCCeEEEEECCCCCccccCCH
Confidence 87 88999999999999998888888888889999999998888899999999999899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcccCCcceeecccC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
++|.++|+++|+++++|++|++|..++++...++|++++|+||+ +||.|+|+++++++. .+++...++...... .
T Consensus 157 ~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~--~~~~~~~~~~~~~~~--~ 232 (376)
T TIGR01977 157 EEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLGPQGTGGLYIREGI--KLKPLKSGGTGSHSA--L 232 (376)
T ss_pred HHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccCCCCceEEEEcCCc--CcCceecCCCccccc--c
Confidence 99999999999999999999999999998888999999999995 568899999998876 355655554322111 1
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+........||+.||++...++++..+++++.+.|.+++++|..++++++.+.|.+++|++
T Consensus 233 ~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~ 293 (376)
T TIGR01977 233 IDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVK 293 (376)
T ss_pred ccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 1111233468899999999999999999999999999999999999999999999887754
No 15
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=1.8e-38 Score=324.37 Aligned_cols=305 Identities=23% Similarity=0.273 Sum_probs=253.3
Q ss_pred hhhhc-CCCCcccccccCCCCeEEeccCCCCCCcH-HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC
Q 017640 48 GHITR-PDFPILHQEVYGSKKLVYLDNAATSQKPI-AVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN 125 (368)
Q Consensus 48 ~~~~r-~~f~~~~~~~~~~~~~i~l~~~~~~~~~~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 125 (368)
.+.+| .+||.+ ++.+|||+++.+++++ .+.+++.+++...+.||+. .+..+....+.++++|+.+++++|
T Consensus 21 ~~~~R~~~fp~l-------~~~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s-~~~~s~~~~~~~e~aR~~ia~~lg 92 (805)
T PLN02724 21 IDELRATEFARL-------KGVVYLDHAGATLYSESQLEAALADFSSNVYGNPHS-QSDSSMRSSDTIESARQQVLEYFN 92 (805)
T ss_pred HHHHHHHHhhhc-------CCCEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCc-CcchhhhHHHHHHHHHHHHHHHhC
Confidence 45567 689998 5689999999998665 5556666777778889884 566667778899999999999999
Q ss_pred CCCCC-cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--------CCCCC
Q 017640 126 ASDSG-EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--------DDESP 196 (368)
Q Consensus 126 ~~~~~-~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--------~~~~~ 196 (368)
+++++ +|+||+|+|+|+++++.++ .+++||+|+++..+|+++. .+..++++.|++++.++++ ..+.+
T Consensus 93 a~~~~~~VvFtsnaT~alnlva~~l---~~~~gd~Iv~t~~eH~svl-~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~ 168 (805)
T PLN02724 93 APPSDYACVFTSGATAALKLVGETF---PWSSESHFCYTLENHNSVL-GIREYALEKGAAAIAVDIEEAANQPTNSQGSV 168 (805)
T ss_pred CCccceEEEEeCChHHHHHHHHHHC---CCCCCCeEEEeeccccchH-HHHHHHHHcCCeEEeccchhcccccccccccc
Confidence 97664 6899999999999999998 4789999999988998877 5677778889999999886 33444
Q ss_pred CH--HHHHHhc----------ccCceEEEEcccccccccccCHHHHHHHHHhc--------CCEEEEecCCcCCcccccC
Q 017640 197 DL--DKLKEML----------SRKTKLVVIHHISNMLASILPIEEIVHWSHDV--------GAKVLVDACQSVPHMVVDV 256 (368)
Q Consensus 197 d~--~~l~~~l----------~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--------g~~li~D~a~~~~~~~~~~ 256 (368)
++ +.|++.+ .+++++|++++.+|.||.++|+++|..+++.+ ++++++|++|++|+.++|+
T Consensus 169 ~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv 248 (805)
T PLN02724 169 VVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDL 248 (805)
T ss_pred ccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCCh
Confidence 43 5566653 24568999999999999999999775555532 3689999999999999999
Q ss_pred CCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccC--C-CCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 257 QGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD--H-STFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 257 ~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~--~-~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
.++++|++++|+||++| |.|+|+|++++++++.+.|...||+.+...... + ......+.||+.||+|+.+++++.+
T Consensus 249 ~~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~a 328 (805)
T PLN02724 249 SRYPADFVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRH 328 (805)
T ss_pred hhcCCCEEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHH
Confidence 99999999999999988 889999999999999999988888765432211 1 1223356899999999999999999
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 333 AIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 333 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
+++++.++|++++++|...|.+++.+.|.+++
T Consensus 329 al~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~ 360 (805)
T PLN02724 329 GFKLLNRLTISAIAMHTWALTHYVANSLRNLK 360 (805)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999875
No 16
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=100.00 E-value=2.9e-37 Score=292.72 Aligned_cols=277 Identities=27% Similarity=0.404 Sum_probs=240.7
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
+|||+++.+++|+.+++++.+++.....+++. .+..+..+.+.++++|+.+++++|++++ +|+||+|+|++++.++.+
T Consensus 1 ~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~t~~~t~a~~~al~~ 78 (379)
T TIGR03402 1 IYLDNNATTRVDPEVLEAMLPYFTEYFGNPSS-MHSFGGEVGKAVEEAREQVAKLLGAEPD-EIIFTSGGTESDNTAIKS 78 (379)
T ss_pred CcCCCcCCCCCCHHHHHHHHHHHHhcCCCCCc-ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHHH
Confidence 59999999999999999999998877777763 4555566788899999999999999864 899999999999999987
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
+.. ...+|++|++...+|+++...+..+ +..|++++.++.++++.+|+++++++++++++++++++++|+||.++|++
T Consensus 79 ~~~-~~~~~~~vv~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~ 156 (379)
T TIGR03402 79 ALA-AQPEKRHIITTAVEHPAVLSLCQHL-EKQGYKVTYLPVDEEGRLDLEELRAAITDDTALVSVMWANNETGTIFPIE 156 (379)
T ss_pred HHH-hcCCCCeEEEcccccHHHHHHHHHH-HHcCCEEEEEccCCCCcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHH
Confidence 511 1246789999999999987766655 45799999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS 308 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~ 308 (368)
+|.++|++||+++++|++|+.|..++++..+++|++++|+||++||.|+|+++++++. .+.|...|+..
T Consensus 157 ~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~v~~~~--~~~p~~~g~~~--------- 225 (379)
T TIGR03402 157 EIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGT--RFRPLLRGGHQ--------- 225 (379)
T ss_pred HHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHcCCCCceEEEEECCCC--CCCCcccCCcc---------
Confidence 9999999999999999999999999999889999999999999999999999999875 35666655432
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-hcCC
Q 017640 309 TFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE-RHNT 366 (368)
Q Consensus 309 ~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~g~ 366 (368)
..+++.||+++..++++.++++++.+ .++.+.++..++.+++.+.|.+ +++.
T Consensus 226 -----~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~~~~~~ 278 (379)
T TIGR03402 226 -----ERGRRAGTENVPGIVGLGKAAELATE-HLEEENTRVRALRDRLEAGLLARIPDA 278 (379)
T ss_pred -----CCCcCCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCE
Confidence 13456899999999999999999987 5788899999999999999985 6654
No 17
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=100.00 E-value=2.3e-37 Score=290.65 Aligned_cols=280 Identities=27% Similarity=0.351 Sum_probs=240.3
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
|||+++.+++|+.+++++.+++.....+++...+..+....+.++++|+.+++++|++++ +|++|+|+|++++.++.++
T Consensus 1 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~v~~~~g~t~a~~~~l~~l 79 (353)
T TIGR03235 1 YLDHNATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-EVIFTSGATESNNLAILGL 79 (353)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCCHHHHHHHHHHHH
Confidence 799999999999999999999876666665434444555677889999999999999765 8999999999999999877
Q ss_pred cCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 150 GLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 150 ~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
.....++| +.|++...+|+++...+..+ +..|++++.++.++++.+|++++++++++++++|++++++|+||.+.|++
T Consensus 80 ~~~~~~~g~~~vi~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~ 158 (353)
T TIGR03235 80 ARAGEQKGKKHIITSAIEHPAVLEPIRAL-ERNGFTVTYLPVDESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIR 158 (353)
T ss_pred HHhcccCCCCeeeEcccccHHHHHHHHHH-HhcCCEEEEEccCCCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHH
Confidence 21112355 78999999999988777655 56699999999988898999999999988999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEccccccc--CCCcccCCcceeecccC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA--MPPFLGGGEMISDVFLD 306 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~--l~~~~~g~~~~~~~~~~ 306 (368)
+|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||+|+|+++++++.+.. ++|...+++.
T Consensus 159 ~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~g~l~~~~~~~~~~~~~~~~~~~~~------- 231 (353)
T TIGR03235 159 EIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKIYGPKGIGALVIRKRGKPKAPLKPIMFGGGQ------- 231 (353)
T ss_pred HHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhcCCCCceEEEEEccCcccccccCceeeCCCC-------
Confidence 9999999999999999999999999999888999999999999999999999999986533 4455444322
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..+++.||+++..++++.++++++.. +.+.++++.+++.+++++.|.+ +|++
T Consensus 232 -------~~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~l~~-~g~~ 283 (353)
T TIGR03235 232 -------ERGLRPGTLPVHLIVGMGEAAEIARR-NAQAWEVKLRAMRNQLRDALQT-LGVK 283 (353)
T ss_pred -------cCccccCCCChHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHhcc-CCeE
Confidence 25788999999999999999998774 8899999999999999999987 6654
No 18
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=100.00 E-value=1.1e-36 Score=290.99 Aligned_cols=310 Identities=18% Similarity=0.209 Sum_probs=244.4
Q ss_pred ccchhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhh-HHHHHHHHHHHHHHHH
Q 017640 44 SVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLS-AKATDEYELARKKVAA 122 (368)
Q Consensus 44 ~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~la~ 122 (368)
....+..+|++||...... +++.+|||+++.+++|+.+.+++.+++..+...+..+ +..+ ..+....+++++ + +
T Consensus 6 ~~~~~~~~r~~f~~~~~~~--~~~~iyld~~a~g~~p~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~-~ 80 (406)
T TIGR01814 6 EADPLRALRDEFHLPKIGD--ENAVIYLDGNSLGLMPKAARNALKEELDKWAKIAIRG-HNTGKAPWFTLDESLLK-L-R 80 (406)
T ss_pred ccChHHHHHHhcCCCcccC--CCCcEEecCCCcCcCcHHHHHHHHHHHHHHHHhhhcc-CccCCCChhhhhhhhcc-c-c
Confidence 3456777899999762211 1568999999999889999999999887765443322 2211 122333344444 5 8
Q ss_pred HcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC---CEEEEcCCCCcccHHHHHHHHHHcCCEE----EEEeCCCCCC
Q 017640 123 FINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG---DEVILTVAEHHSAIVPWQLVAQKTGANL----KFLNLNDDES 195 (368)
Q Consensus 123 ~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g---d~vl~~~~~~~s~~~~~~~~~~~~g~~v----~~v~~~~~~~ 195 (368)
++|++++ +|+||+|+|++++.++.++ ++++ +.|++.+.+|+++...+...+++.|+++ +.++.+.++.
T Consensus 81 l~g~~~~-~v~~~~~~t~~l~~~~~~~----~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 155 (406)
T TIGR01814 81 LVGAKED-EVVVMNTLTINLHLLLASF----YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEET 155 (406)
T ss_pred ccCCCCC-cEEEeCCchHHHHHHHHHh----cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCc
Confidence 9999764 9999999999999999987 4443 4788888999999888887777888887 5666666688
Q ss_pred CCHHHHHHhcc---cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-
Q 017640 196 PDLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM- 271 (368)
Q Consensus 196 ~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~- 271 (368)
+|++.+++.++ +++++|++++++|.||.+.|+++|.++||++|+++++|++|++|..++++..+++|++++|+||+
T Consensus 156 ~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s~hK~l 235 (406)
T TIGR01814 156 LRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWCTYKYL 235 (406)
T ss_pred cCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEcCcccc
Confidence 89999988774 68999999999999999999999999999999999999999999999999889999999999995
Q ss_pred CCCCcceEEEEcccccccCCCcccCCcceeecc--cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 272 CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVF--LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 272 ~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
+||+| |.++++++.+..+.|...||......+ .....+...+.+|+.||+|+..++++.++++++.+.|+++++++.
T Consensus 236 ~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 314 (406)
T TIGR01814 236 NAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKS 314 (406)
T ss_pred CCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 46778 767776665656777777765432221 111122233468899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 017640 350 VKWIICSIIVIQERH 364 (368)
Q Consensus 350 ~~l~~~l~~~l~~~~ 364 (368)
.++.+++.+.+.+.+
T Consensus 315 ~~l~~~l~~~l~~~~ 329 (406)
T TIGR01814 315 LLLTDYLEELIKARC 329 (406)
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999998753
No 19
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=100.00 E-value=1.9e-36 Score=287.45 Aligned_cols=280 Identities=25% Similarity=0.338 Sum_probs=239.3
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
+|||+++.+++++.|++++.+++...+.||+ +.+..+....+.+++.++.+++.+++.++++|++|+|+|+++..++.+
T Consensus 1 ~yld~aa~~~~~~~v~~~~~~~~~~~~~n~~-~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~ 79 (382)
T TIGR03403 1 VYLDNNATTMLDPKVKELMDPFFCDIYGNPN-SLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred CcccCcCCCCCCHHHHHHHHHHHHhcCcCCc-cccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHH
Confidence 5999999999999999999999998888887 455555556677778888888888874345999999999999999987
Q ss_pred ccCCC-CCC-CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC
Q 017640 149 WGLSN-LKS-GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 149 ~~~~~-~~~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (368)
+.+.. .++ +++|+++..+|+++...+. .++..|++++.++.++++.+|++.++++++++++++++++++||||.++|
T Consensus 80 ~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-~~~~~G~~v~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCA-FLESLGVEVTYLPINEQGTITAEQVREAITEKTALVSVMWANNETGMIFP 158 (382)
T ss_pred HHHhhcccCCCCEEEEcCCccHHHHHHHH-HHHHCCCEEEEEecCCCCCCCHHHHHHhcccCCeEEEEEcccCCCccccC
Confidence 62111 245 5789999999999887665 44678999999999888999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccC
Q 017640 227 IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
+++|.++|+++|+++++|++|+.|..++++..+++|++++|+||++||+|+|+++++++. .+.|.+.|+...
T Consensus 159 ~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~G~g~l~vr~~~--~~~p~~~g~~~~------ 230 (382)
T TIGR03403 159 IKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGV--ELTPLFHGGEHM------ 230 (382)
T ss_pred HHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhCCCCceEEEEECCCC--CCCCcccCCCCC------
Confidence 999999999999999999999999998888888999999999999999999999999876 455665544321
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+++.||+|+..++++..++++..+ .++.+.++..++++++.+.|.+++|++
T Consensus 231 --------~~~~~gt~~~~~~~al~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~~~ 282 (382)
T TIGR03403 231 --------GGRRSGTLNVPYIVAMGEAMRLANE-YLDFEKSHVRRLRDRLEDALLELPDVF 282 (382)
T ss_pred --------CCcccCCcChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 3456799999999999999998877 488889999999999999998877654
No 20
>PRK02948 cysteine desulfurase; Provisional
Probab=100.00 E-value=4.4e-36 Score=284.83 Aligned_cols=276 Identities=23% Similarity=0.283 Sum_probs=238.2
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
++|||+++.+++|+.+++++.+++.....+++ +.+..+....+.++++|+.+++++|.+++ +|++++|+|+++..++.
T Consensus 1 ~~yld~a~~~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~r~~la~~~g~~~~-~i~~~~g~t~a~~~~~~ 78 (381)
T PRK02948 1 MIYLDYAATTPMSKEALQTYQKAASQYFGNES-SLHDIGGTASSLLQVCRKTFAEMIGGEEQ-GIYFTSGGTESNYLAIQ 78 (381)
T ss_pred CEeccCCCCCCCCHHHHHHHHHHHHhcCCCCc-cccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEeCcHHHHHHHHHH
Confidence 37999999999999999999999987777776 45666677788899999999999998764 99999999999999888
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCH
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (368)
++.....++|++|++...+|+++...+. .++..|++++.++.++++.+|+++|++++++++++|++++++||||.+.|+
T Consensus 79 ~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~ 157 (381)
T PRK02948 79 SLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQGYTVTEIPVDKSGLIRLVDLERAITPDTVLASIQHANSEIGTIQPI 157 (381)
T ss_pred HHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCCCEEEEEeeCCCCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhH
Confidence 7721113678999999999999877665 456789999999998889999999999998899999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
++|.++|+++|+++++|++|++|..++++..++.|+++.|+||++||+|+|++++++++ .+.+...++.
T Consensus 158 ~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~gp~G~G~l~~~~~~--~~~~~~~~~~--------- 226 (381)
T PRK02948 158 AEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIYGPKGVGAVYINPQV--RWKPVFPGTT--------- 226 (381)
T ss_pred HHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcCCCCcEEEEEEcCCC--CCCCcccCCC---------
Confidence 99999999999999999999999988888888999999999999999999999999875 2222222211
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...+|+.||++.++++++.++++.+.+ .++.++++..++.+++.+.|+++
T Consensus 227 -----~~~~~~~~t~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 276 (381)
T PRK02948 227 -----HEKGFRPGTVNVPGIAAFLTAAENILK-NMQEESLRFKELRSYFLEQIQTL 276 (381)
T ss_pred -----CCCCcCCCCccHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 125678899999999999999998765 57889999999999999999876
No 21
>PRK14012 cysteine desulfurase; Provisional
Probab=100.00 E-value=4.5e-36 Score=286.65 Aligned_cols=282 Identities=26% Similarity=0.341 Sum_probs=240.0
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHH--HhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYE--AYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.+|||+++.+++|+.+.+++.+++. ....+++...+..+....+.++++|+.+++++|++++ ++++++|+|++++++
T Consensus 4 ~iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-~v~~~~g~t~al~~~ 82 (404)
T PRK14012 4 PIYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-EIVFTSGATESDNLA 82 (404)
T ss_pred eEEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-eEEEeCCHHHHHHHH
Confidence 5899999999999999999999887 4445655433333333457788999999999999764 899999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
+.++.....++||+|++++++|+++...+..+ +..|++++.++.++++.+|++.|++++++++++|++++++|+||.+.
T Consensus 83 l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~~v~~~~~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~ 161 (404)
T PRK14012 83 IKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLDPQSNGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQ 161 (404)
T ss_pred HHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEEEEccCCCCcCCHHHHHHhcCCCCEEEEEECcCCCccchh
Confidence 88762112478999999999999988776654 45699999999988899999999999999999999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeeccc
Q 017640 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFL 305 (368)
Q Consensus 226 ~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~ 305 (368)
|+++|.++|+++|+++++|++|++|..++++...++|++++|+||.+||.|+|+++++++....+.|...|++.
T Consensus 162 ~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~gp~g~G~l~~~~~~~~~~~~~~~g~~~------ 235 (404)
T PRK14012 162 DIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIYGPKGIGALYVRRKPRVRLEAQMHGGGH------ 235 (404)
T ss_pred hHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhccCCCceEEEEEecCCCCCCCceecCCCc------
Confidence 99999999999999999999999999988888888999999999999998999999998876666666655442
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 306 DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 306 ~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..+++.||+++..++++..++++.+. +...+.++.+++++++.+.|.+++++
T Consensus 236 --------~~~~~~gt~~~~~~~~l~~al~~~~~-~~~~~~~~~~~l~~~l~~~L~~~~~i 287 (404)
T PRK14012 236 --------ERGMRSGTLPTHQIVGMGEAARIAKE-EMATENERIRALRDRLWNGIKDIEEV 287 (404)
T ss_pred --------cCCccCCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 14577899999999999999998766 57778899999999999999876653
No 22
>PLN02409 serine--glyoxylate aminotransaminase
Probab=100.00 E-value=2.6e-33 Score=266.83 Aligned_cols=281 Identities=20% Similarity=0.198 Sum_probs=230.5
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
+..+|...++...++.|++++.+... . ..+..+.+..+++++.+++++|.+.++.+++++++|+++..++
T Consensus 8 ~~~~l~~pGP~~~~~~V~~a~~~~~~-----~-----~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~ 77 (401)
T PLN02409 8 GRNHLFVPGPVNIPERVLRAMNRPNE-----D-----HRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESAL 77 (401)
T ss_pred CCceeccCCCCCCCHHHHHHhcCCCC-----C-----CCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHH
Confidence 34577777888899999999865431 1 2245668889999999999999986557899999999999999
Q ss_pred HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc----CceEEEEcccccccc
Q 017640 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHISNMLA 222 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~n~tG 222 (368)
..+ +++||+|++.+++|++.. |...+++.|++++.++.++++.+|++++++++++ ++++|++++++|+||
T Consensus 78 ~~~----~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG 151 (401)
T PLN02409 78 TNT----LSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTG 151 (401)
T ss_pred Hhc----CCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCCCCCHHHHHHHHhhCcCCCccEEEEEeeccccc
Confidence 877 899999999999998754 6677888899999999887666899999999985 789999999999999
Q ss_pred cccCHHHHHHH--HHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcC-CCCcceEEEEcccccccCCCcccCCcc
Q 017640 223 SILPIEEIVHW--SHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 223 ~~~~l~~i~~l--~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
.++|+++|.++ |+++|+++++|++|++|..+++++++++|++++|+||++ +|+|+|++++++++++.+.+.......
T Consensus 152 ~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~ 231 (401)
T PLN02409 152 VTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVF 231 (401)
T ss_pred ccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCee
Confidence 99999999999 999999999999999999999999899999999999955 788999999999998877653221100
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
. + +.....+. ....+..+|+++..++++..+++++.+.|+++++++..++.+++.+.|.++ |++
T Consensus 232 ~-~-~~~~~~~~-~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~ 295 (401)
T PLN02409 232 F-D-WADYLKFY-KLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLK 295 (401)
T ss_pred c-C-HHHHHHHH-hcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 0 0 00000010 012344669999999999999999999999999999999999999999875 654
No 23
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=1.5e-30 Score=244.81 Aligned_cols=273 Identities=18% Similarity=0.176 Sum_probs=219.4
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCC
Q 017640 74 AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN 153 (368)
Q Consensus 74 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~ 153 (368)
++..+.|+.+.+++.+.... ..+....+..+++++.+++++|+++++.+++++|+|+++..++.++
T Consensus 5 ~~~~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~---- 70 (356)
T cd06451 5 PGPSNVPPRVLKAMNRPMLG----------HRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL---- 70 (356)
T ss_pred CCCcCCCHHHHHHhCCCccC----------CCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh----
Confidence 44557788998888644211 1223456778899999999999965546789999999999999988
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHH
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVH 232 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~ 232 (368)
+++||+|++..++|++.. +...++..|++++.++.++++.+|++++++.+++ ++++|++++++|++|.+.|+++|.+
T Consensus 71 ~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~ 148 (356)
T cd06451 71 LEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGA 148 (356)
T ss_pred CCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCCCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHH
Confidence 789999999998887732 4456677899999999988788999999999987 8999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCC--cccCCcceeecccCCCC
Q 017640 233 WSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPP--FLGGGEMISDVFLDHST 309 (368)
Q Consensus 233 l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~--~~~g~~~~~~~~~~~~~ 309 (368)
+|+++|+++++|++|++|..++++...+.|++++|+||+++ |.|+|++++++++++.+.+ ...++...... ...
T Consensus 149 ~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 225 (356)
T cd06451 149 LAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLL---LLK 225 (356)
T ss_pred HHHhcCCEEEEeeehhccCccccccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHH---HHh
Confidence 99999999999999999988888777789999999999765 6689999999998877653 22221110000 000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 310 FADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 310 ~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+. ....+..+|+++..++++.++++++...|++.+.++.+++++++.+.|.++ |++
T Consensus 226 ~~-~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 281 (356)
T cd06451 226 YW-GEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLK 281 (356)
T ss_pred hh-cccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 00 112367889999999999999999999899999999999999999999875 554
No 24
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.97 E-value=3.1e-30 Score=243.17 Aligned_cols=248 Identities=18% Similarity=0.231 Sum_probs=198.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCC-CcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEE
Q 017640 107 AKATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANL 185 (368)
Q Consensus 107 ~~~~~~~~~~r~~la~~~~~~~~-~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 185 (368)
..+.+.++++|+.+++++|++++ +.|++|+|+|++++.++.++ ..+||.+++..+.+++.. +...++..|.++
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l----~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~ 104 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA----VPKDGKLLVVINGAYGAR--IVQIAEYLGIPH 104 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc----CCCCCeEEEEeCChhhHH--HHHHHHHcCCce
Confidence 35678889999999999999753 36899999999999999988 677777666555444322 356677889999
Q ss_pred EEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccE
Q 017640 186 KFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADF 263 (368)
Q Consensus 186 ~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~ 263 (368)
+.++.++++.+|+++++++++. +++++++++++|+||.+.|+++|.++||+||+++++|++|++|..++++..+++|+
T Consensus 105 ~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~ 184 (363)
T TIGR02326 105 HVVDTGEVEPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDY 184 (363)
T ss_pred EEEeCCCCCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccE
Confidence 9999988888999999999875 45789999999999999999999999999999999999999999999998889999
Q ss_pred EEecCcCc-CCCCcceEEEEcccccccCCCcccCCcceeecccCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 264 LVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH--STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 264 ~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
+++|+||+ +||+|+|++++++++++.+.+...+... .....+ ....+...+| |++...++++..+++.+...
T Consensus 185 ~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~f---t~~~~~~~al~~al~~l~~~ 259 (363)
T TIGR02326 185 LISSANKCIQGVPGFGFVIARQAELAACKGNARSLSL--DLYDQWRCMEDNHGKWRF---TSPTHVVHAFAQALLELEKE 259 (363)
T ss_pred EEecCccccccCCcceEEEECHHHHHHhhcCCCceee--cHHHHHHHHhccCCCCCC---CCcHHHHHHHHHHHHHHHHh
Confidence 99999995 5889999999999988766543221100 000000 1111222344 67899999999999988765
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 341 -GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 341 -g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+++.++++..++++++.+.|+++ |+
T Consensus 260 g~~~~~~~~~~~~~~~l~~~L~~~-g~ 285 (363)
T TIGR02326 260 GGVAARHQRYQQNQKTLVAGMRAL-GF 285 (363)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999876 43
No 25
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.97 E-value=4.7e-30 Score=240.59 Aligned_cols=270 Identities=15% Similarity=0.140 Sum_probs=211.1
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhccCCCCcchhh---HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC-HHHHHHHHHHHc
Q 017640 74 AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLS---AKATDEYELARKKVAAFINASDSGEIVFTKN-ATEAINLVAYSW 149 (368)
Q Consensus 74 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g-~t~a~~~~~~~~ 149 (368)
.++.+.|+.|++++.+++..+. +++++.+..+ ..+.+.++++|+.+++++|++.+++|+||+| +|++++.++.++
T Consensus 5 pGp~~~p~~V~~a~~~~~~~~~-~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 5 AGPAALPEEVLEQAQKELLDFN-GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCCCHHHHHHHHHHHhhcc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc
Confidence 4556889999999999998876 8888777777 4677899999999999999865568999977 999999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCC-C-HHHHHHhcccCceEEEEcccccccccccCH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESP-D-LDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~-d-~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (368)
.. ..+++++|+... ...-+..++++.|++++.++.++++.. + ++..+..+++++++|+++|.+|.||...+
T Consensus 84 ~~-~~~~~~~i~~g~-----~~~~~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~- 156 (355)
T cd00611 84 LG-DKGTADYVVTGA-----WSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD- 156 (355)
T ss_pred CC-CCCeEEEEECCH-----HHHHHHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-
Confidence 21 123666665422 222234467888999999998654322 4 33334456788999999999999999843
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
++++.||+++++|++|++|+.++|+++++ +.++|.||++||+|+|++++++++++++.|...... ++
T Consensus 157 ----~i~~~~g~~~~VDa~qs~g~~~idv~~~~--~~~ss~~K~lGP~G~g~l~~~~~~~~~~~~~~~~~~-------~~ 223 (355)
T cd00611 157 ----EVPDTGGVPLVADMSSNILSRPIDVSKFG--VIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSML-------NY 223 (355)
T ss_pred ----eecccCCCeEEEEccccccCCCCCHHHhC--EEEeecccccCCCceEEEEECHHHHhhcccCCCCcc-------cH
Confidence 44556999999999999999999998765 466779999999999999999999988776532110 00
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.... ......||||+..++++.++++++.++ |++++++|.+++++++++.|.+++|+
T Consensus 224 ~~~~--~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl 281 (355)
T cd00611 224 KTHA--DNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF 281 (355)
T ss_pred HHHH--hcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 0000 011126899999999999999999999 79999999999999999999998774
No 26
>PRK02769 histidine decarboxylase; Provisional
Probab=99.97 E-value=1e-29 Score=238.40 Aligned_cols=275 Identities=15% Similarity=0.086 Sum_probs=219.8
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG-EIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-~v~~t~g~t~a~~~~~~ 147 (368)
.|+.+......+....+.+..+.....++|.. .+..+....+..+++++.+++++|+++++ ..+||+|+|+++..++.
T Consensus 24 ~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~-~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~ 102 (380)
T PRK02769 24 FNVGYPEAADFDYSALKRFFSFSINNCGDPYS-KSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCY 102 (380)
T ss_pred cccCCCchhhcCHHHHHHHHHhhhccCCCccc-cCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHH
Confidence 46666666655555666666666555566653 44444556788889999999999998653 35899999999887776
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC---ceEEEEcccccccccc
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK---TKLVVIHHISNMLASI 224 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~n~tG~~ 224 (368)
+.+ .+.++++|++++.+|+++..+ ++..|.+.+.|+.++++.+|+++|+++++++ |.+|++++++|+||.+
T Consensus 103 ~ar--~~~~~~~ii~s~~~H~Sv~ka----~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i 176 (380)
T PRK02769 103 LAR--ELFPDGTLYYSKDTHYSVSKI----ARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI 176 (380)
T ss_pred HHH--HhCCCcEEEeCCCceehHHHH----HHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc
Confidence 542 245788999999999996544 4555888888998889999999999999876 8999999999999999
Q ss_pred cCHHHHHHHHHhcC---CEEEEecCCcCCccc-------ccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCc
Q 017640 225 LPIEEIVHWSHDVG---AKVLVDACQSVPHMV-------VDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 225 ~~l~~i~~l~~~~g---~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~ 293 (368)
.|+++|.++|++|| +++++|++|+.+..+ +++.. ++|+++.|+||++| |.|+|+++++++.++.+.+.
T Consensus 177 dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~ 255 (380)
T PRK02769 177 DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVD 255 (380)
T ss_pred CCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccC
Confidence 99999999999998 699999999988775 55555 89999999999876 99999999999877665431
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
. .+.. .......||++....+++..+++++...|.+++.+++.++++++.++|++. |+
T Consensus 256 ~------~yl~--------~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~ 313 (380)
T PRK02769 256 V------DYIG--------SRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GI 313 (380)
T ss_pred c------cccC--------CCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 1 0100 011234889999999999999999999999999999999999999999874 44
No 27
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=3.5e-29 Score=229.41 Aligned_cols=277 Identities=18% Similarity=0.230 Sum_probs=231.3
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
.|=..++...++.|+.++.+.. .+..+..+....+++.+.+...++.+..+.++++.++|.+++.++.++
T Consensus 7 ~Ll~PGP~~v~~~V~~am~~~~----------~~h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl 76 (383)
T COG0075 7 LLLTPGPVPVPPRVLLAMARPM----------VGHRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASL 76 (383)
T ss_pred eeeeCCCCCCCHHHHHHhcCCC----------CCCCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhc
Confidence 3444556678888888875442 224567788999999999999999985446678889999999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccccccccCH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l 227 (368)
++|||+|++.....++.. |..+++++|++++.+...+...+|+++++++|++ +.++|.++|+.++||...|+
T Consensus 77 ----~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl 150 (383)
T COG0075 77 ----VEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPL 150 (383)
T ss_pred ----cCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcH
Confidence 999999999988888765 8899999999999999998899999999999984 56899999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcccCCcceeecccC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
++|+++|++||.++|+|++.++|..++++++|+.|+++++.+|. -+|+|+|++.++++.++.+...... ++.-++. .
T Consensus 151 ~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~-~~ylDL~-~ 228 (383)
T COG0075 151 KEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHP-SFYLDLK-K 228 (383)
T ss_pred HHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCC-ceeecHH-H
Confidence 99999999999999999999999999999999999999999995 5699999999999998887744332 1111111 1
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+..+.... +....||++..++++..+++.++++|+++..+|.+.+++++++.++++ |+
T Consensus 229 ~~~~~~~~-~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl 286 (383)
T COG0075 229 WLKYMEKK-GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GL 286 (383)
T ss_pred HHHHHhhc-CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 11111111 344569999999999999999999999999999999999999999876 44
No 28
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.97 E-value=1.3e-29 Score=239.37 Aligned_cols=276 Identities=14% Similarity=0.146 Sum_probs=215.7
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-CHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~-g~t~a~~~ 144 (368)
+..+||+.+...+.+..|++++.+... ...| .+..+.+.++++|+.+++++|.+++++|+|++ |+|.+++.
T Consensus 11 ~~~~~f~~Gp~~~~~~~v~~a~~~~~~---~~~h-----r~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~ 82 (378)
T PRK03080 11 PADPRFSSGPCKKRPGWQLEALADALL---GRSH-----RQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEM 82 (378)
T ss_pred CCCCCcCCCCcCCChHHHHHHHHhhhc---ccCc-----CCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHH
Confidence 456788888877777779999885532 1222 23467899999999999999997555898885 89999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHH-HHHHcCC-EEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VAQKTGA-NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~-~~~~~g~-~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
++.++ +++++.+++.+.+|.+. |.. ++++.|+ +++.++.++++.+|+++++ . ++.|+++|.+|.||
T Consensus 83 ~~~~l----~~~~~~~vi~~g~f~~~---~~~~~~~~~g~~~v~~~~~~~g~~~d~~~i~----~-~~~V~~~h~~t~tG 150 (378)
T PRK03080 83 ALWSL----LGARRVDHLAWESFGSK---WATDVVKQLKLEDPRVLEADYGSLPDLSAVD----F-DRDVVFTWNGTTTG 150 (378)
T ss_pred HHHhc----CCCCcceEEEeCHHHHH---HHHHHHhhcCCCCceEeccCCCCCCCHhhcC----C-CCCEEEEecCCccc
Confidence 99998 66433344445666663 443 4466788 9999998877788877643 2 57799999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcC-CCCcceEEEEcccccccCCCcccCCccee
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~~~ 301 (368)
.+.|+++|++ ++||+++++|++|++|..++|+++ .|++++|.||++ ||+|+|++++++++++.+.|...||....
T Consensus 151 ~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~ 226 (378)
T PRK03080 151 VRVPVARWIG--ADREGLTICDATSAAFALPLDWSK--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPK 226 (378)
T ss_pred eeccchhhcc--ccCCCeEEEecccccccCCCCHHH--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCch
Confidence 9999999999 889999999999999999999986 799999999965 68999999999999999988876664311
Q ss_pred ecccCCCC-CCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 302 DVFLDHST-FADPPSRFE---AGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 302 ~~~~~~~~-~~~~~~~~~---~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+.+... +.....+++ .+|+++..++++..+++++.++ |++++++|.+++++++++++.++.+++
T Consensus 227 --~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~ 295 (378)
T PRK03080 227 --FFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWAT 295 (378)
T ss_pred --hheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 111111 001122344 3568888888889999999998 899999999999999999999886644
No 29
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.97 E-value=7.7e-29 Score=235.27 Aligned_cols=274 Identities=19% Similarity=0.176 Sum_probs=209.2
Q ss_pred CeEEeccC-CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 67 KLVYLDNA-ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 67 ~~i~l~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.++++|.- -.|++++.++++++++...+ .++....+..+....+.++++|+.+|+++|++ ++++++|+++++..+
T Consensus 19 ~~~~~~~~~~~~p~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~---~~~~~~g~t~a~~~a 94 (387)
T PRK09331 19 EFINLDPIQRGGILTPEARKALIEYGDGY-SVCDYCPGRLDQIKKPPIADFHEDLAEFLGMD---EARVTHGAREGKFAV 94 (387)
T ss_pred cccccChhhcCCCCCHHHHHHHHHHHhcc-CCCcccccccccccChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHH
Confidence 44555543 35699999999999998543 34321123333444567889999999999985 578899999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC--CCCCCCCHHHHHHhccc-------CceEEEEcc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL--NDDESPDLDKLKEMLSR-------KTKLVVIHH 216 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~l~~-------~~~~v~~~~ 216 (368)
+.++ +++||+|+++.++|++.+.. ++..|++++.++. ++++.+|++.+++++++ ++++|++++
T Consensus 95 l~~l----~~~gd~Vlv~~~~h~s~~~~----~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 95 MHSL----CKKGDYVVLDGLAHYTSYVA----AERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred HHHh----cCCCCEEEECCCchHHHHHH----HHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 9998 79999999999999997643 4567999999998 66788999999998863 689999999
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCccc
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~ 295 (368)
++|+||.+.|+++|.++|++||+++++|++|+.|..+++...++.|++++|+||+++ ++|+|++++++++++.+.....
T Consensus 167 ~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~ 246 (387)
T PRK09331 167 VDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSR 246 (387)
T ss_pred CCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccC
Confidence 999999999999999999999999999999999998888888889999999999765 6679999999998887654321
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+... ....+..++.+....+++..+++.+.+. .+ ..++..++++++.+.|.+++|++
T Consensus 247 ~~~~-------------~~~~~~~~~~~~~~~~~~~aal~~~~~~-~~-~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 247 KFGV-------------KEVELLGCTLRGAPLVTLMASFPHVVER-VK-RWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred CCcc-------------cceeeeceecCchHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHhcCCCEE
Confidence 1100 0000112233334455556666655543 22 34555778889999999887754
No 30
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.97 E-value=3.5e-29 Score=225.50 Aligned_cols=263 Identities=20% Similarity=0.181 Sum_probs=203.5
Q ss_pred eccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCCHHHHHHHHHH
Q 017640 71 LDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 71 l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~t~g~t~a~~~~~~ 147 (368)
|+.+.+. ++|+.+.+++++.+..... ..+..+++..++.+.+++++++++|.. ++++|++|.|+.+++..++.
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~----~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPST----NQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchh----ccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 8999888 8899999999998876422 345666777899999999999988865 44589999999999999999
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--------CCCCCCHHHHHHhcccCceEEEEccccc
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--------DDESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--------~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
++ +++||+|++.+|.|.+ +....+..|.++++|+.. +++.+|.+++|.+++++|++|++++|||
T Consensus 112 ~l----~~~GDeVii~eP~fd~----Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhN 183 (420)
T KOG0257|consen 112 GL----LNPGDEVIVFEPFFDC----YIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHN 183 (420)
T ss_pred HH----cCCCCEEEEecCcchh----hhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCC
Confidence 98 9999999999996555 455556679999999987 3589999999999999999999999999
Q ss_pred ccccccC---HHHHHHHHHhcCCEEEEecCCcC----Cc--ccc--cCCCCCccEEEecCcCcCCCCc--ceEEEEcccc
Q 017640 220 MLASILP---IEEIVHWSHDVGAKVLVDACQSV----PH--MVV--DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 220 ~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~~--~~~--~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
|||.+++ |++|+++|++||+++|.|++|.. +. ..+ ....+...+.++|++|.||..| +||++.++.+
T Consensus 184 PtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L 263 (420)
T KOG0257|consen 184 PTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHL 263 (420)
T ss_pred CcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHh
Confidence 9999999 89999999999999999999873 21 222 1233468899999999999999 9999998777
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----HhC---HHHHHHHHHHHHHHHHHH
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS----TIG---MQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~----~~g---~~~i~~~~~~l~~~l~~~ 359 (368)
+..+++... ++.- +-+.+.+.|.+.++..-. -.| ...+.+..++.++.+.+.
T Consensus 264 ~~~~~~vh~--------------------~~~~-~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~ 322 (420)
T KOG0257|consen 264 YSALFPVHQ--------------------NFVF-TCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKA 322 (420)
T ss_pred hhhHHHHhh--------------------cccc-ccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 776665432 1111 222223333333333222 111 233667778888889998
Q ss_pred HHhhcCCC
Q 017640 360 IQERHNTT 367 (368)
Q Consensus 360 l~~~~g~t 367 (368)
|.+. |++
T Consensus 323 L~~l-g~~ 329 (420)
T KOG0257|consen 323 LEEL-GLK 329 (420)
T ss_pred HHhc-CCc
Confidence 8887 654
No 31
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=6.3e-29 Score=234.29 Aligned_cols=267 Identities=19% Similarity=0.243 Sum_probs=203.4
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~t~g~t~a~~ 143 (368)
++|.|+.+.+. +.|+.+.+++.+.+..... + +....+..++.+.+.+.+.+..|.. ++++|++|+|+++|+.
T Consensus 29 ~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~--~---Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~ 103 (393)
T COG0436 29 DVIDLSIGEPDFPTPEHIIEAAIEALEEGGT--H---YTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF 103 (393)
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHHHhcccC--C---CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence 68999999997 7788899999988875321 1 1111222333334444444444432 4446999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC---CCCCCCHHHHHHhcccCceEEEEcccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN---DDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
.++.++ +++||+|++++|.|++ +....+..|++++.++++ .++.+|++.|+++++++||+|++++|+||
T Consensus 104 ~~~~a~----~~pGDeVlip~P~Y~~----y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NP 175 (393)
T COG0436 104 LAFLAL----LNPGDEVLIPDPGYPS----YEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNP 175 (393)
T ss_pred HHHHHh----cCCCCEEEEeCCCCcC----HHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCC
Confidence 999999 9999999999998888 455556679999999975 37999999999999999999999999999
Q ss_pred cccccC---HHHHHHHHHhcCCEEEEecCCcC----Cc--c-cccCCC-CCccEEEecCcCcCCCCc--ceEEEEc-ccc
Q 017640 221 LASILP---IEEIVHWSHDVGAKVLVDACQSV----PH--M-VVDVQG-LDADFLVASSHKMCGPTG--IGFLFGK-SDL 286 (368)
Q Consensus 221 tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~~--~-~~~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~-~~l 286 (368)
||.+++ +++|+++|++||++||.|++|.- +. . .++... .+..+.+.|+||.|+.+| +||++++ +++
T Consensus 176 TGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 176 TGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred cCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecChHHH
Confidence 999999 88999999999999999999872 21 1 112222 256788889999999999 9999999 777
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~-~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
++.+..... ....+++...+.++..+|+.-+. ...+.+++..++.++.+.+.|.++.|
T Consensus 256 ~~~~~~~~~---------------------~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g 314 (393)
T COG0436 256 IAALRKLKS---------------------YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGG 314 (393)
T ss_pred HHHHHHHHH---------------------hcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 766553321 11226777788888888886532 23566678888999999999998876
Q ss_pred CC
Q 017640 366 TT 367 (368)
Q Consensus 366 ~t 367 (368)
++
T Consensus 315 ~~ 316 (393)
T COG0436 315 LS 316 (393)
T ss_pred ee
Confidence 54
No 32
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.97 E-value=3.7e-29 Score=233.01 Aligned_cols=263 Identities=17% Similarity=0.179 Sum_probs=214.8
Q ss_pred CCcHHHHHHHHHHHHHhhccCCCCcchhhH---HHHHHHHHHHHHHHHHcCCCCCCcEEEeCC-HHHHHHHHHHHccCCC
Q 017640 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSA---KATDEYELARKKVAAFINASDSGEIVFTKN-ATEAINLVAYSWGLSN 153 (368)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~r~~la~~~~~~~~~~v~~t~g-~t~a~~~~~~~~~~~~ 153 (368)
++|..|++++++++..++ +.+++.+..+. .+.+.++++++.++++++.+.+++|++++| +|.|++.++..+
T Consensus 2 ~~p~~v~~~~~~~~~~~~-~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl---- 76 (349)
T TIGR01364 2 ALPEEVLEQAQKELLNFN-GTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL---- 76 (349)
T ss_pred CCCHHHHHHHHHHHhCcc-CCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc----
Confidence 578999999999999877 77777775554 455899999999999999865557888866 999999999998
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC----CCCCCHHHHHHhcccCceEEEEcccccccccccCHHH
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEE 229 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~----~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~ 229 (368)
+.+|+++++...+.++.. +...+++.|+ +..+..++ ...+|+++++ +++++++|+++|..|.||+..|
T Consensus 77 ~~~~~~~l~i~~G~fg~r--~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--- 148 (349)
T TIGR01364 77 LAEGKVADYIVTGAWSKK--AAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--- 148 (349)
T ss_pred CCCCCeEEEEECCHHHHH--HHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc---
Confidence 778999888877777655 6888999999 77777542 2345666555 3568899999999999999987
Q ss_pred HHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCCC
Q 017640 230 IVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHST 309 (368)
Q Consensus 230 i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~ 309 (368)
++++.+++++++|+++++|..++|++++ |++++|.||++||+|+|++++++++++.+.|..... .++..
T Consensus 149 --~l~~~~~~l~iVDavss~g~~~id~~~~--d~~~~ssqK~lgP~Glg~l~~s~~~~~~~~~~~~~~-------~~~~~ 217 (349)
T TIGR01364 149 --ELPDVKNAPLVADMSSNILSRPIDVSKF--GLIYAGAQKNIGPAGLTVVIVRKDLLGRASRITPSM-------LNYKI 217 (349)
T ss_pred --eecccCCCeEEEEccccccCccCCHHHc--cEEEEecccccCCCceEEEEECHHHHhhcccCCCCc-------chHHH
Confidence 6677789999999999999999999875 599999999999999999999999998887732210 11100
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 310 FADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 310 ~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.. ......||||+..++++..+++++.++ |++++.+|..++++++++.|.+++|+
T Consensus 218 ~~--~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl 273 (349)
T TIGR01364 218 HA--ENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGF 273 (349)
T ss_pred HH--hcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 00 011234899999999999999999999 79999999999999999999998764
No 33
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.97 E-value=2.5e-28 Score=230.70 Aligned_cols=272 Identities=18% Similarity=0.196 Sum_probs=211.1
Q ss_pred cCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEeCCHHHHHHHHHHHccC
Q 017640 73 NAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWGL 151 (368)
Q Consensus 73 ~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~~v~~t~g~t~a~~~~~~~~~~ 151 (368)
..++..+++.+.+++.+.. . ..+..+.+..+++|+.+++++|.+++ +.|++++|+|+++..++.++
T Consensus 10 ~pgP~~~~~~~~~a~~~~~----~-------~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l-- 76 (368)
T PRK13479 10 TPGPLTTSRTVREAMLRDW----G-------SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL-- 76 (368)
T ss_pred cCCCCCCCHHHHHHhCCCC----C-------CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc--
Confidence 3444455666666654432 1 11233457888999999999999653 36789999999999999998
Q ss_pred CCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccccccccCHHH
Q 017640 152 SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEE 229 (368)
Q Consensus 152 ~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~ 229 (368)
..+||.+++..+.+++.. +...++..|++++.++.++++.+|++++++++++ ++++|++++++|+||.+.|+++
T Consensus 77 --~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~ 152 (368)
T PRK13479 77 --VPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGEDEPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDE 152 (368)
T ss_pred --cCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCCCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHH
Confidence 678889888877666543 3566788899999999987788899999999864 4578999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCcccCCcceeecccCC-
Q 017640 230 IVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH- 307 (368)
Q Consensus 230 i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~- 307 (368)
|.++|+++|+++++|++|++|..++++..+++|++++|+|| ++||+|+|++++++++++.+.+....+.. +.....
T Consensus 153 i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 230 (368)
T PRK13479 153 IAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSL--DLYDQWA 230 (368)
T ss_pred HHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeee--cHHHHHh
Confidence 99999999999999999999988888888889999999999 56899999999999988877643321100 000000
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
........+| |+++..++++.++++.+.+. ++++..++..++++++.+.|.++ |++
T Consensus 231 ~~~~~~~~~~---t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 287 (368)
T PRK13479 231 YMEKTGQWRF---TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFE 287 (368)
T ss_pred hhcccCCCCC---CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 0011123334 78999999999999988665 58888899999999999999876 543
No 34
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.96 E-value=6.1e-28 Score=227.35 Aligned_cols=264 Identities=18% Similarity=0.182 Sum_probs=199.1
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
+++.+.+.+++.++...+ .++....+..+....+..+++++.+++++|. +++++|+|+++++..++.++ +++
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~---~~i~~~~g~t~al~~~l~~~----~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGY-SVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM---DEARVTPGAREGKFAVMHSL----CEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhccc-CCccccccccccccCchHHHHHHHHHHHcCC---ceEEEeCCHHHHHHHHHHHh----cCC
Confidence 478888888888877433 3332111222222345678999999999998 38999999999999999988 889
Q ss_pred CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCC--CCCHHHHHHhcc-------cCceEEEEcccccccccccCH
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE--SPDLDKLKEMLS-------RKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~--~~d~~~l~~~l~-------~~~~~v~~~~~~n~tG~~~~l 227 (368)
||+|+++.++|++.+. .++..|++++.++.++++ .+|++.++++++ +++++|++++++||||...|+
T Consensus 83 gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~ 158 (361)
T cd06452 83 GDWVVVDGLAHYTSYV----AAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDA 158 (361)
T ss_pred CCEEEEcCCcchHHHH----HHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccH
Confidence 9999999999988653 356779999999988654 889999999886 368999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
++|.++|+++|+++++|++|+.|..+++...++.|++++|+||+++ +.++|++++++++++.+......++. .
T Consensus 159 ~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~-~----- 232 (361)
T cd06452 159 KKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKI-K----- 232 (361)
T ss_pred HHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcccccccc-c-----
Confidence 9999999999999999999999887777767789999999999776 44599999999988877543321110 0
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
...+..+++....++++..+++.+.+. ++.+ ++..+.++++.+.|.+++|++
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~~-~~~~~~~~~l~~~L~~l~g~~ 284 (361)
T cd06452 233 -------EVELLGCTLRGAPLVTLMASFPHVKER-VKRW-DEEVEKARWFVAELEKIEGIK 284 (361)
T ss_pred -------eeeeeccccCchHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHhcCCCeE
Confidence 011223455556666666777665442 3333 333445688889998876653
No 35
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.96 E-value=8.1e-28 Score=228.52 Aligned_cols=276 Identities=14% Similarity=0.066 Sum_probs=206.9
Q ss_pred EEeccCC--------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC-CcEEE--eCC
Q 017640 69 VYLDNAA--------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVF--TKN 137 (368)
Q Consensus 69 i~l~~~~--------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~~v~~--t~g 137 (368)
+|+|+++ .+++.+.+.+.+...+.....+|+.. ....+.++++++++++++|.+++ +++.+ |+|
T Consensus 35 iyld~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np~s~-----~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsG 109 (431)
T TIGR01788 35 LSLDGNPRLNLATFVTTWMEPEARKLMDETINKNMIDKDEY-----PQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIG 109 (431)
T ss_pred hhhcCCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCcccC-----ccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEech
Confidence 5666666 67788889999888887655565432 22348899999999999999832 24544 899
Q ss_pred HHHHHHHHHHHccCC---C-CC-----CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhccc
Q 017640 138 ATEAINLVAYSWGLS---N-LK-----SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSR 207 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~---~-~~-----~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~ 207 (368)
+|+|+++++.+.+.. . .+ .+..|++++.+|+++ ...++..|.+++.+|++++ +.+|+++|+++|++
T Consensus 110 gTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv----~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~ 185 (431)
T TIGR01788 110 SSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCW----EKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE 185 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHH----HHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh
Confidence 999999998765210 0 01 123799999999994 4555667999999999876 58999999999999
Q ss_pred CceEEEEcccccccccccCHHHHHHHHHhc------CCEEEEecCCc-------CCcccccCCCCCccEEEecCcCc-CC
Q 017640 208 KTKLVVIHHISNMLASILPIEEIVHWSHDV------GAKVLVDACQS-------VPHMVVDVQGLDADFLVASSHKM-CG 273 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~------g~~li~D~a~~-------~~~~~~~~~~~~~d~~~~s~~K~-~g 273 (368)
++.+|++++.+|.||.+.|+++|+++|+++ |+++++|++|+ .+..++++...++|.++.|.||+ +|
T Consensus 186 ~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~~~DSis~s~HK~~~~ 265 (431)
T TIGR01788 186 NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLPRVKSINVSGHKYGLV 265 (431)
T ss_pred CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCCCceEEEECchhccCC
Confidence 999999999999999999999999999999 99999999999 44455555556789999999996 59
Q ss_pred CCcceEEEEccc--ccccCCC--cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 274 PTGIGFLFGKSD--LLSAMPP--FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 274 ~~G~G~l~~~~~--li~~l~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
|.|+|+++++++ +.+.+.. -+.++... .... .++.+....++....+..+...|++++.+++
T Consensus 266 P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~-------------~~t~-~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~ 331 (431)
T TIGR01788 266 YPGVGWVIWRDEEALPEELIFHVNYLGGDEP-------------TFTL-NFSRPANQVIAQYYNFLRLGREGYRKIMQNS 331 (431)
T ss_pred CCCcEEEEEeChHHcchhheecccccCCCCC-------------Ccce-ecCchHHHHHHHHHHHHHhcHHHHHHHHHHH
Confidence 999999999875 2222211 11121110 0111 2233333444556667777778999999999
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 017640 350 VKWIICSIIVIQERHNTT 367 (368)
Q Consensus 350 ~~l~~~l~~~l~~~~g~t 367 (368)
.++++++.+.|++.++++
T Consensus 332 ~~la~~l~~~L~~~~~~e 349 (431)
T TIGR01788 332 LDVARYLAEEIAKLGPFE 349 (431)
T ss_pred HHHHHHHHHHHHhCCCEE
Confidence 999999999999987654
No 36
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.96 E-value=4.5e-28 Score=226.81 Aligned_cols=270 Identities=19% Similarity=0.191 Sum_probs=215.4
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchh---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CCHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFL---SAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLV 145 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~~la~~~~~~~~~~v~~t-~g~t~a~~~~ 145 (368)
++-+.++..+|+.|++++.+.+.+++ +.+.|.+.. +..+.+.++++++.+++++|.+.+++|+++ .++|.+++.+
T Consensus 5 ~l~~pGP~~~p~~V~~a~~~~~~~~~-~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~ 83 (360)
T PRK05355 5 YNFSAGPAMLPEEVLEQAQQELLDWN-GSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMV 83 (360)
T ss_pred eeccCCCCCCCHHHHHHHHHHhhccc-cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHH
Confidence 45567788999999999999987665 544454433 344569999999999999998544467666 7778899999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHH-hcccCceEEEEccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKE-MLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~-~l~~~~~~v~~~~~~n~tG~ 223 (368)
+..+ +.+|+++++.....++.. +...+++.|.. ..+..++ .+..+..++++ .+++++++|.++|..|.||.
T Consensus 84 ~~nl----~~~g~~~l~i~~G~fg~r--~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv 156 (360)
T PRK05355 84 PMNL----LGGGKKADYVDTGSWSKK--AIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETIDGT 156 (360)
T ss_pred HHhc----CCCCCeEEEEECCHHHHH--HHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCcceE
Confidence 9988 888998888777666654 67888888965 6666553 45556556656 78888999999999999999
Q ss_pred cc-CHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceee
Q 017640 224 IL-PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (368)
Q Consensus 224 ~~-~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~ 302 (368)
.. |+++| +|+++++|+++++|+.++|++++ |++++|.||++||+|+|++++++++++++.|.. ++ .
T Consensus 157 ~~~~i~~i------~g~l~vVDavss~g~~~idv~~~--d~~~~ssqK~lgP~Glg~l~~s~~~l~~~~~~~-~~-~--- 223 (360)
T PRK05355 157 EFHELPDT------GDVPLVADMSSDILSRPIDVSKF--GLIYAGAQKNIGPAGLTIVIVREDLLGRALPSI-PS-M--- 223 (360)
T ss_pred ecCccccc------CCCcEEEEcCccccCccCCHHHc--cEEEEeccccccCCceEEEEECHHHHhhcccCC-Ch-H---
Confidence 98 67766 89999999999999999999875 599999999999999999999999998887742 11 1
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.++..+. ......||||+..++++.++++++.++ |++++.+|.+++++++++.|+++.
T Consensus 224 --~~~~~~~--~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~ 282 (360)
T PRK05355 224 --LDYKTHA--DNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSD 282 (360)
T ss_pred --HHHHHHH--hcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1111000 011234899999999999999999999 899999999999999999999875
No 37
>PLN03032 serine decarboxylase; Provisional
Probab=99.96 E-value=2.4e-27 Score=220.82 Aligned_cols=274 Identities=11% Similarity=-0.005 Sum_probs=218.4
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEeCCHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG-EIVFTKNATEAINLVA 146 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-~v~~t~g~t~a~~~~~ 146 (368)
..++++....-....+.+++.++.....+||.. .+..+....+.++++++.+++++|.++++ ..+||+|+|+|+..++
T Consensus 24 ~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s-~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al 102 (374)
T PLN03032 24 SVHFGYPYNLDFDYGELSQLMKYSINNLGDPFI-ESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGI 102 (374)
T ss_pred hhccCCCchhccChHHHHHHHHhcccCCCCCcc-cCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHH
Confidence 356666665555656788888887776678864 56667778999999999999999998652 2499999999999998
Q ss_pred HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEccccccccc
Q 017640 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLAS 223 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~ 223 (368)
.+.+. ..++..|+++..+|+|+..+ ++..|.+++.||.+++|.+|+++|+++|++ +|.+|+++..+|+||.
T Consensus 103 ~~ar~--~~~~~~vi~s~~~H~Sv~ka----a~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~ 176 (374)
T PLN03032 103 LVGRE--VFPDGILYASRESHYSVFKA----ARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDKPAILNVNIGTTVKGA 176 (374)
T ss_pred HHHHH--hCCCcEEEeCCCceeHHHHH----HHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCcc
Confidence 86531 23456899999999996544 556688899999999999999999999976 4789999999999999
Q ss_pred ccCHHHHHHHHHhcC-----CEEEEecCCcCCcccc-------cCCCCCccEEEecCcCcCC-CCcceEEEEcccccccC
Q 017640 224 ILPIEEIVHWSHDVG-----AKVLVDACQSVPHMVV-------DVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAM 290 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g-----~~li~D~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l 290 (368)
+.|+++|+++|++|| +++++|++++.+..++ ++. .++|.++.|+||++| |.|+|+++++++.++.+
T Consensus 177 idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~ 255 (374)
T PLN03032 177 VDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKKHVKAL 255 (374)
T ss_pred CCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEchhhHhh
Confidence 999999999999996 5899999999877764 332 368999999999888 99999999998876544
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.... .+... ... --.|+.+-...+++..++..+-..|+.++.+++.++++++.++|.+.
T Consensus 256 ~~~~------~Yl~~-------~d~-ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 256 SQNV------EYLNS-------RDA-TIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA 314 (374)
T ss_pred ccCC------cccCC-------CCC-cccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3110 00000 011 12567777777888888998888899999999999999999999885
No 38
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.96 E-value=3.8e-27 Score=204.96 Aligned_cols=299 Identities=21% Similarity=0.229 Sum_probs=241.2
Q ss_pred hhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHH-HHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC
Q 017640 50 ITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKA-LQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (368)
Q Consensus 50 ~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 128 (368)
..|+.|..- +++|||+.++.|..|+.+.+. ++...++|.....++.......+.++-+.+-.+++.++|+.+
T Consensus 21 ~lr~~f~lp-------~~viyLdgnSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~ 93 (407)
T COG3844 21 KLRDRFALP-------GGVIYLDGNSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARA 93 (407)
T ss_pred hhHhhccCC-------CCeEEeeccccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCC
Confidence 356666653 789999999999777554444 444555555443322222234466777789999999999998
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC-CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV-AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
. +|+++.+.+--+..++.+.- +.++|+.|++++ .+|++-++.....+...+.. .+-.+.+.++++++++++
T Consensus 94 ~-Evvv~dtts~nl~k~L~aal--r~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~~~~~~P~~~~~~~~d 165 (407)
T COG3844 94 G-EVVVTDTTSINLFKVLAAAL--RPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDLEGVIAPRALEEAITD 165 (407)
T ss_pred C-ceEEeCCcchHHHHHHHHHh--ccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccceeeeChHHHHHhhcc
Confidence 6 89999888777776666542 356688877775 56778777777777666543 222345578899999999
Q ss_pred CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcC-CCCc-ceEEEEccc
Q 017640 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTG-IGFLFGKSD 285 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~G-~G~l~~~~~ 285 (368)
++.+|++++++.-||+.+++.+|.+++|+||++++.|-+|+.|.+++++...+.||-+++.+|.+ |++| .+++++.++
T Consensus 166 d~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~ 245 (407)
T COG3844 166 DVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPR 245 (407)
T ss_pred ceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCCceeEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999954 4444 999999999
Q ss_pred ccccCCCcccCCcceeecccCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFA--DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..+...|...||.....++.....|. +...||..||+++.++.++..+|+.+.+.++.+++++...|.+++.+.++.+
T Consensus 246 h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~ 325 (407)
T COG3844 246 HRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEAR 325 (407)
T ss_pred cccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhc
Confidence 99988888888888777776655554 4668999999999999999999999999999999999999999999998765
No 39
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=4e-27 Score=221.34 Aligned_cols=268 Identities=20% Similarity=0.238 Sum_probs=205.1
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCC-cEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG-EIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
..+++.+.+++++... + ....+.+..+++|+.+++++|+++++ .|++++|+|+++..++.++ +.
T Consensus 8 ~~~~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~----~~ 72 (355)
T TIGR03301 8 LSTSATVRDAMLVDWC------H-----WDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL----VP 72 (355)
T ss_pred CCCCHHHHHHhhhhcc------C-----CCHHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc----cC
Confidence 3456666666655211 1 12234577889999999999998653 6788999999999999988 67
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccccccccCHHHHHHH
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEEIVHW 233 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~i~~l 233 (368)
++|++++.++.+++.. +...++..|.+++.++.++++.+|++++++.+++ +++++++++++|+||.+.|+++|.++
T Consensus 73 ~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l 150 (355)
T TIGR03301 73 RDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEYEPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKV 150 (355)
T ss_pred CCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHH
Confidence 7887776665544422 4566777899999999887788999999999864 45788899999999999999999999
Q ss_pred HHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCC
Q 017640 234 SHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFAD 312 (368)
Q Consensus 234 ~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~ 312 (368)
|++||+++++|+++++|..++++..++.|++++|+||+ +|++|+|++++++++++.+......... .....+..+..
T Consensus 151 ~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 228 (355)
T TIGR03301 151 ARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYL--DLYDQWAYMEK 228 (355)
T ss_pred HHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCcee--eHHHHHHHhhh
Confidence 99999999999999999888888778899999999995 5788999999999998876532111000 00000000000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 313 PPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 313 ~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+...+|++...++++..+++.+.+.| ++...++.+++.+++.+.|.+. |+
T Consensus 229 --~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~ 280 (355)
T TIGR03301 229 --TGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GF 280 (355)
T ss_pred --cCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 112235899999999999999998776 8889999999999999999875 54
No 40
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=6.8e-27 Score=223.25 Aligned_cols=292 Identities=17% Similarity=0.129 Sum_probs=209.7
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchh--hHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFL--SAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
.++++++.+..+..++.+.++..... .. ...+ ..+.. ..+..+..+++++.+++++|.+.+ +++++++++++.+
T Consensus 20 ~~~~~l~~g~~~~~~p~~~~~~~~~~-~~-~~~~-~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~-~v~~~~~g~~~~~ 95 (398)
T cd00613 20 QSMSFLGSGTYKHNPPAVIKRNILEN-EF-YTAY-TPYQPEISQGRLQALFELQTMLCELTGMDVA-NASLQDEATAAAE 95 (398)
T ss_pred cCcccccccccCCcCcHHHHHHhccc-cC-cccC-CCCChhhhhhHHHHHHHHHHHHHHHHCCCcc-ceeccCchHHHHH
Confidence 56689999999976666655543333 11 0111 11111 345568888999999999998754 6777775555544
Q ss_pred HHHHHccCCCCCC--CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 144 LVAYSWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 144 ~~~~~~~~~~~~~--gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
.++.++. +.+ ||+|+++++.|+++...+....+..|++++.++.++++.+|++++++++.+++++|++++++ ++
T Consensus 96 ~~~~~~~---~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~ 171 (398)
T cd00613 96 AAGLAAI---RAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGGTVDLEALKEEVSEEVAALMVQYPN-TL 171 (398)
T ss_pred HHHHHHH---hcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCCCCcCHHHHHHhcCCCeEEEEEECCC-CC
Confidence 4444331 444 99999999999998877776655556899999988778889999999999999999999985 89
Q ss_pred ccccCH-HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCC-----CcceEEEEcccccccCCCccc
Q 017640 222 ASILPI-EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGP-----TGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 222 G~~~~l-~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~-----~G~G~l~~~~~li~~l~~~~~ 295 (368)
|.+.++ ++|.++|++||+++|+|++|+.+....+...+++|++++|+||+++| +|+|++++++++++.+.+...
T Consensus 172 G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~ 251 (398)
T cd00613 172 GVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLV 251 (398)
T ss_pred ceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCee
Confidence 999984 99999999999999999999876655555667899999999997643 458999999999888776665
Q ss_pred CCcceeecccCC---CCCCCCCCCCCCCCCCH-----HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 296 GGEMISDVFLDH---STFADPPSRFEAGTPAI-----GEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 296 g~~~~~~~~~~~---~~~~~~~~~~~~gt~~~-----~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
||.........+ ........|++.|++++ ....++..+++.+.+.|+++++++..++.+++.+.|.++.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 329 (398)
T cd00613 252 GVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGG 329 (398)
T ss_pred ccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 554321100000 01111224555555543 33334445556666668889999999999999999988654
No 41
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.7e-26 Score=218.97 Aligned_cols=259 Identities=14% Similarity=0.163 Sum_probs=187.6
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC----C--CCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN----A--SDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~----~--~~~~~v~~t~g~ 138 (368)
++++.|+.+.+. .+++.+.+++.+.+.....+.+ . .....++|++++++++ . +++++|++|+|+
T Consensus 32 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y----~-----~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~ 102 (399)
T PRK07681 32 HKMIDLSIGNPDMPPADFVREEMVHTANQKESYGY----T-----LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGS 102 (399)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCC----C-----CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCc
Confidence 577889888776 5677888888877653211110 0 0123367777777764 3 332589999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++.+++.++ +++||.|++++|+|+. +...++..|++++.++++++ +.+|++++++++.+++++|++++
T Consensus 103 ~~al~~~~~~~----~~~Gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~ 174 (399)
T PRK07681 103 QDGLVHLPMVY----ANPGDIILVPDPGYTA----YETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILNF 174 (399)
T ss_pred HHHHHHHHHHh----CCCCCEEEECCCCccc----hHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeC
Confidence 99999999988 8999999999998877 44556677999999999754 56899999999988899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cc---cCC-CCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VV---DVQ-GLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~---~~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
|+||||.+++ +++|+++|++||++||+|++|..-.. .. .+. ..+..+++.|+||.||.+| +||++.+
T Consensus 175 P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~ 254 (399)
T PRK07681 175 PGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN 254 (399)
T ss_pred CCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC
Confidence 9999999999 77889999999999999999973211 11 111 1245688999999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+..... ....+.+.+...++..+++.... -+++.+++.++..+++.+.|.+.
T Consensus 255 ~~l~~~~~~~~~---------------------~~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 255 EEIVRALTQFKS---------------------NTDYGVFLPIQKAACAALRNGAA-FCEKNRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred HHHHHHHHHHHh---------------------hcccCCCHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 988877653321 01113444455555555543211 14555666677777788888765
No 42
>PRK09105 putative aminotransferase; Provisional
Probab=99.95 E-value=2e-26 Score=217.28 Aligned_cols=253 Identities=15% Similarity=0.131 Sum_probs=192.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++.++|+.+.++ ++|+.+.+++.+.......++. . ...++|+.+++++|.+++ +|++|+|+++++.+
T Consensus 43 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~----------~-~~~~Lr~aia~~~~v~~e-~I~it~Gs~~ai~~ 110 (370)
T PRK09105 43 EGAVFLNANECPLGPSPAARDAAARSAALSGRYDL----------E-LEDDLRTLFAAQEGLPAD-HVMAYAGSSEPLNY 110 (370)
T ss_pred CCcEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCC----------c-hHHHHHHHHHHHhCcChh-hEEEcCChHHHHHH
Confidence 678999999987 6789999999887654322211 1 155799999999999765 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||+|++++|+|+. +...++..|++++.++.++++.+|++.+++. .++++++++++|+||||.+
T Consensus 111 ~~~~l----~~~gd~Vli~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~ 181 (370)
T PRK09105 111 AVLAF----TSPTAGLVTADPTYEA----GWRAADAQGAPVAKVPLRADGAHDVKAMLAA-DPNAGLIYICNPNNPTGTV 181 (370)
T ss_pred HHHHH----cCCCCEEEEeCCChHH----HHHHHHHcCCeEEEecCCCCCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcC
Confidence 99998 8899999999997776 4555677799999999988888999999877 5678999999999999999
Q ss_pred cCHHHHHHHHHh--cCCEEEEecCCcC-Cccc--ccCCC-CCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccC
Q 017640 225 LPIEEIVHWSHD--VGAKVLVDACQSV-PHMV--VDVQG-LDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 225 ~~l~~i~~l~~~--~g~~li~D~a~~~-~~~~--~~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g 296 (368)
+|.++|.++++. +++++|+|++|.. ...+ .++.. ....+++.|+||.||.+| +||+++++++++.+.+..
T Consensus 182 ~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~~-- 259 (370)
T PRK09105 182 TPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARFG-- 259 (370)
T ss_pred cCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHHHHHhcC--
Confidence 998888777654 4899999999852 1111 12212 234577789999999999 999999999887766431
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
....+.....++..+++. ..-++..+++..+..+++.+.|++. |+
T Consensus 260 ----------------------~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~ 304 (370)
T PRK09105 260 ----------------------HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GY 304 (370)
T ss_pred ----------------------CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 013455555555555542 1125666777888888888888774 44
No 43
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.95 E-value=2.2e-26 Score=217.62 Aligned_cols=269 Identities=19% Similarity=0.184 Sum_probs=207.0
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
+|+... +++.+.+.+++.+++.....++. . . ....+..+++++.+++++|.+++ .+++++|+++++..++.++
T Consensus 24 ~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~--~-~--~~~~~~~~~~~~~la~~~g~~~~-~~~~~~ggt~a~~~a~~~~ 96 (371)
T PRK13520 24 ILSSMC-TEPHPIARKAHEMFLETNLGDPG--L-F--PGTAKLEEEAVEMLGELLHLPDA-YGYITSGGTEANIQAVRAA 96 (371)
T ss_pred eeeeee-cCchHHHHHHHHHHHhcCCCCcc--c-C--ccHHHHHHHHHHHHHHHhCCCCC-CeEEecCcHHHHHHHHHHH
Confidence 355544 55777788998888775333321 1 1 23466678999999999998765 7889999999999998776
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEE 229 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~ 229 (368)
.....+++++|++++++|++ +...++..|++++.++.++++.+|++.|++++++++++|++.+++|+||.+.|+++
T Consensus 97 ~~~~~~~~~~vl~~~~~h~s----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~ 172 (371)
T PRK13520 97 RNLAKAEKPNIVVPESAHFS----FDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPE 172 (371)
T ss_pred HhhccCCCceEEecCcchHH----HHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHH
Confidence 21122468899999998877 55566778999999999888899999999999888888888888999999999999
Q ss_pred HHHHHHhcCCEEEEecCCcCCccc-------ccCCCCCccEEEecCcCcC-CCCcceEEEEc-ccccccCC---CcccCC
Q 017640 230 IVHWSHDVGAKVLVDACQSVPHMV-------VDVQGLDADFLVASSHKMC-GPTGIGFLFGK-SDLLSAMP---PFLGGG 297 (368)
Q Consensus 230 i~~l~~~~g~~li~D~a~~~~~~~-------~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~-~~li~~l~---~~~~g~ 297 (368)
|.++|+++|+++++|++|+.+..+ ++....++|++++|.||+. ++.++|+++++ +++++.+. ++..+
T Consensus 173 I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~- 251 (371)
T PRK13520 173 LSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTS- 251 (371)
T ss_pred HHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccccC-
Confidence 999999999999999999865432 2333457899999999964 45567777764 44665543 11111
Q ss_pred cceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 298 EMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..++ ..||++...++++..+++.+.+.|.+.+.++..++++++.+.|.++ |++
T Consensus 252 ----------------~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~ 305 (371)
T PRK13520 252 ----------------KKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFE 305 (371)
T ss_pred ----------------CCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 0122 3578888889999999999888889999999999999999999886 654
No 44
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.95 E-value=1.6e-26 Score=216.65 Aligned_cols=256 Identities=16% Similarity=0.175 Sum_probs=196.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++++.|..+.++ ++|+.+++++.++......++.. . ..++|+.++++++++++ +|++|+|+++++..
T Consensus 19 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~----------~-~~~lr~~ia~~~~~~~~-~i~~~~G~~~~l~~ 86 (346)
T TIGR01141 19 KEVIKLNSNENPFGPPPKAKEALRAEADKLHRYPDP----------D-PAELKQALADYYGVDPE-QILLGNGSDEIIEL 86 (346)
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHhHHHhhcCCCC----------C-HHHHHHHHHHHhCcChH-HEEEcCCHHHHHHH
Confidence 678999988766 67889999999876543222211 1 14799999999998754 89999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||+|++++|+|+. +...++..|.+++.++.++++.+|++.+++++.+++++|++++++||||.+
T Consensus 87 ~~~~l----~~~gd~v~~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~ 158 (346)
T TIGR01141 87 LIRAF----LEPGDAVLVPPPTYSM----YEISAKIHGAEVVKVPLDEDGQLDLEDILVAIDDKPKLVFLCSPNNPTGNL 158 (346)
T ss_pred HHHHh----cCCCCEEEEcCCCHHH----HHHHHHHcCCeEEEeccCCCCCCCHHHHHHhcCCCCCEEEEeCCCCCCCCC
Confidence 99888 7899999999997654 445567789999999998888899999999988889999999999999999
Q ss_pred cCHHHHHHHHHhc--CCEEEEecCCcCCcc---ccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccC
Q 017640 225 LPIEEIVHWSHDV--GAKVLVDACQSVPHM---VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 225 ~~l~~i~~l~~~~--g~~li~D~a~~~~~~---~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g 296 (368)
+|++++.++|+.+ |+++|+|++|+.-.. ..+ ......+++++|+||++|.+| +|++++++++++.+++....
T Consensus 159 ~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~ 238 (346)
T TIGR01141 159 LSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP 238 (346)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCC
Confidence 9999999999877 999999999872111 111 112235688899999998777 89999999988877654311
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+.+...+.++...++... ..++++++.+++.+++.+.|.+++|+
T Consensus 239 -----------------------~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~ 283 (346)
T TIGR01141 239 -----------------------FNLSRLAQAAAIAALRDDD--FIEKTVEEINAERERLYDGLKKLPGL 283 (346)
T ss_pred -----------------------CCCCHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1233444444444443322 26778888889999999999877664
No 45
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.9e-26 Score=217.04 Aligned_cols=266 Identities=14% Similarity=0.113 Sum_probs=196.1
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~t~g~t~a~ 142 (368)
++.++|+.+... ++++.+.+++.+++..... ..+....+..+..+.+++.+++.+|.. ++++|++|+|+++++
T Consensus 27 ~~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~----~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l 102 (389)
T PRK05957 27 PGTISLGQGVVSYPPPPEAIEALNNFLANPEN----HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAF 102 (389)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCCCC----CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHH
Confidence 457899998877 6788999999887753211 122222344667778888888888975 245899999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
..++.++ +++||+|++++|.|..... .++..|++++.++.+.++.+|++++++++++++++|++++++||||
T Consensus 103 ~~~~~~~----~~~gd~Vlv~~P~y~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG 174 (389)
T PRK05957 103 MNAILAI----TDPGDEIILNTPYYFNHEM----AITMAGCQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTG 174 (389)
T ss_pred HHHHHHh----cCCCCEEEEeCCCCcCHHH----HHHhcCCEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCC
Confidence 9999887 7899999999999877533 3456799999999987888999999999988999999999999999
Q ss_pred cccC---HHHHHHHHHhcCCEEEEecCCcCCc------cc-ccC-CCCCccEEEecCcCcCCCCc--ceEEEEccccccc
Q 017640 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPH------MV-VDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSA 289 (368)
Q Consensus 223 ~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~-~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~ 289 (368)
.++| +++|+++|++||+++|+|++|.... .+ ..+ +.....+++.|+||.+|++| +||+++++++++.
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~ 254 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEA 254 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHH
Confidence 9999 8889999999999999999986211 11 111 22245688999999999999 9999999998887
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+...... ...+.+.....++..+++.-.. -+++..++..+..+++.+.|+++.+
T Consensus 255 ~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~r~~l~~~L~~~~~ 308 (389)
T PRK05957 255 IKKIQDT---------------------ILICPPVVSQYAALGALQVGKS-YCQQHLPEIAQVRQILLKSLGQLQD 308 (389)
T ss_pred HHHHHhh---------------------cccCCCcHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7754321 1113333344444444431111 1344455567777778788776544
No 46
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=1.9e-26 Score=205.91 Aligned_cols=266 Identities=16% Similarity=0.159 Sum_probs=208.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~ 143 (368)
++++.|=-+... +.||.|++++++.++.. .+.+.....+..+++..+..+..+.. .++.|+|++|.--++.
T Consensus 25 ~DvlPmWVADMDf~~pp~i~~Al~~rvdhG-------vfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~ 97 (388)
T COG1168 25 EDVLPMWVADMDFPTPPEIIEALRERVDHG-------VFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGIS 97 (388)
T ss_pred CCcceeeeecccCCCCHHHHHHHHHHHhcC-------CCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHH
Confidence 566777777766 78999999999998862 22222334667888999999988876 3358999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CC--CCCCHHHHHHhccc-CceEEEEccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DD--ESPDLDKLKEMLSR-KTKLVVIHHISN 219 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~--~~~d~~~l~~~l~~-~~~~v~~~~~~n 219 (368)
.+++++ .++||.|++.+|.|+ +|....+..|.++...|+. ++ +.+|+++||+++.. +++++++|+|||
T Consensus 98 ~~I~~~----T~~gd~Vvi~tPvY~----PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHN 169 (388)
T COG1168 98 LAIRAL----TKPGDGVVIQTPVYP----PFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHN 169 (388)
T ss_pred HHHHHh----CcCCCeeEecCCCch----HHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCC
Confidence 999999 899999999999555 4666677789999999987 34 56799999998876 569999999999
Q ss_pred ccccccC---HHHHHHHHHhcCCEEEEecCCcC----C--cccc---cCCCCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 220 MLASILP---IEEIVHWSHDVGAKVLVDACQSV----P--HMVV---DVQGLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 220 ~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~--~~~~---~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
|||.++. +++|.++|++||+.||.|++|+. | ++++ +....+..+.+.|.+|.|+.+| ++.++..++
T Consensus 170 P~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~ 249 (388)
T COG1168 170 PTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNR 249 (388)
T ss_pred CCCccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCH
Confidence 9999999 88999999999999999999982 2 2222 2222256788889999999888 777777654
Q ss_pred cc-ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh-
Q 017640 286 LL-SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER- 363 (368)
Q Consensus 286 li-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~- 363 (368)
.+ .+....+ .+...+.+|..++.|..+|.+.-..+ ++.+.++++.+.+++.+.+.+.
T Consensus 250 ~lr~~~~~~l--------------------~~~~~~~~n~lg~~A~~aAY~~G~~W-Ld~L~~yl~~N~~~~~~~l~~~~ 308 (388)
T COG1168 250 ELRAKFLKRL--------------------KRNGLHGPSALGIIATEAAYNQGEPW-LDELLEYLKDNRDYVADFLNKHL 308 (388)
T ss_pred HHHHHHHHHH--------------------HHhcCCCCchHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHHhhC
Confidence 43 3322221 11223578999999999999988876 8999999999999999999765
Q ss_pred cCCC
Q 017640 364 HNTT 367 (368)
Q Consensus 364 ~g~t 367 (368)
|+++
T Consensus 309 P~v~ 312 (388)
T COG1168 309 PGVK 312 (388)
T ss_pred CCcE
Confidence 5654
No 47
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.95 E-value=3.9e-26 Score=217.02 Aligned_cols=262 Identities=19% Similarity=0.195 Sum_probs=188.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~v~~t~g~ 138 (368)
++++.|+.+.+. ++++.+.+++.+.+...... .+. ......++|+++++++ |. +++++|++|+|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~ 102 (385)
T PRK09276 31 VDVISLGIGDPDLPTPDHIIEAMCKAVEDPENH----QYP----SYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGS 102 (385)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCC----CCC----CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 567889988876 56778888888777532111 111 0112336777777766 44 233358999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++||.|++++|+|+.. ...++..|++++.++.+.+ +.+|++++++.+.+++++|++++
T Consensus 103 ~~~i~~~~~~~----~~~gd~Vl~~~P~y~~~----~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~ 174 (385)
T PRK09276 103 KEGIAHIPLAF----VNPGDVVLVPDPGYPVY----KIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINY 174 (385)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcCh----HHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeC
Confidence 99999999988 89999999999988874 4445667999999998643 56899999999888899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccc---cCCC-CCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVV---DVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~---~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
|+||||.++| +++|+++|++||+++|+|++|.... ... .+.. .+..+++.|+||.||.+| +||++++
T Consensus 175 p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~ 254 (385)
T PRK09276 175 PNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN 254 (385)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC
Confidence 9999999999 5788899999999999999987321 111 1221 245688999999999999 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+...... ...+.+.+...++..+++.... -+++++++.++..+++.+.|++.
T Consensus 255 ~~l~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 312 (385)
T PRK09276 255 ADLIAGLGKVKSN---------------------VDSGVFQAIQEAGIAALNGPQE-VVEELRKIYQERRDILVEGLRKL 312 (385)
T ss_pred HHHHHHHHHHHhh---------------------ccCCCCHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 9988776643210 0112333444445455542222 25666777788888888888775
Q ss_pred cCC
Q 017640 364 HNT 366 (368)
Q Consensus 364 ~g~ 366 (368)
|+
T Consensus 313 -~~ 314 (385)
T PRK09276 313 -GL 314 (385)
T ss_pred -CC
Confidence 44
No 48
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=3.1e-26 Score=217.75 Aligned_cols=259 Identities=13% Similarity=0.097 Sum_probs=187.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g~ 138 (368)
+++++|+.+.++ ++|+.+.+++.+.+... . ..+. ......++|+.++++++ .++ ++|++|+|+
T Consensus 32 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~---~--~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~it~G~ 101 (387)
T PRK08960 32 HDVIHLEIGEPDFTTAEPIVAAGQAALAAG---H--TRYT----AARGLPALREAIAGFYAQRYGVDVDP-ERILVTPGG 101 (387)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcC---C--CccC----CCCCCHHHHHHHHHHHHHHhCCCCCh-hhEEEccCc
Confidence 678999999988 67999999998887631 0 0111 12233467788888763 334 599999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++||+|++++|+|+..... ++..|++++.++++++ +.+|++.++++++++++++++++
T Consensus 102 ~~al~~~~~~~----~~~gd~vlv~~p~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~ 173 (387)
T PRK08960 102 SGALLLASSLL----VDPGKHWLLADPGYPCNRHF----LRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVAS 173 (387)
T ss_pred HHHHHHHHHHh----cCCCCEEEEcCCCCcchHHH----HHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEEC
Confidence 99999999988 89999999999999986543 3445899999998754 57899999999998899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccC-CCCCccEEEecCcCcCCCCc--ceEEEEccccc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLL 287 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li 287 (368)
++||||.++| +++|+++|++||+++|+|++|..-.. .... ......++++|+||.+|.+| +||++++++++
T Consensus 174 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~ 253 (387)
T PRK08960 174 PANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAV 253 (387)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhccCCEEEEeecccccCCcccEEEEEEcCHHHH
Confidence 9999999999 55777789999999999999863111 1111 11234578899999999889 99999999988
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+...... +.. +.+.....++..+++.....-++.+++...+..+.+.+.|++.
T Consensus 254 ~~~~~~~~~--------------------~~~-~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 308 (387)
T PRK08960 254 PELEKLAQN--------------------LYI-SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL 308 (387)
T ss_pred HHHHHHHhh--------------------hcc-CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 776543321 111 2344444444444431101124555666667777777777664
No 49
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.1e-26 Score=216.03 Aligned_cols=252 Identities=18% Similarity=0.140 Sum_probs=191.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+++++|+.+.++ .+++.+.+++.+. .....+|.. ...++|+++++++|.+++ +|++|+|+++++..
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~-~~~~~Yp~~-----------~~~~lr~~ia~~~~~~~~-~I~~t~Ga~~~i~~ 118 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNM-KFPYVYPDP-----------ESRRLRAALAEDSGLESE-NILVGCGADELIDL 118 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhh-HhhccCCCC-----------CHHHHHHHHHHHhCcChh-hEEEcCCHHHHHHH
Confidence 578999999866 5777788887542 111112211 133799999999998765 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc-ccCceEEEEccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML-SRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l-~~~~~~v~~~~~~n~tG~ 223 (368)
++.++ +++||+|++++|.|+. +...++..|++++.++.++++.+|+++|++++ .+++++|++++|+||||.
T Consensus 119 ~~~~~----~~~gd~Vlv~~P~y~~----y~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~ 190 (380)
T PLN03026 119 LMRCV----LDPGDKIIDCPPTFGM----YVFDAAVNGAEVIKVPRTPDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGS 190 (380)
T ss_pred HHHHh----cCCCCEEEEcCCChHH----HHHHHHHcCCEEEEeecCCCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCC
Confidence 99988 7899999999997653 55666778999999999877889999999998 678999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEecCCcCCc---ccc-cCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCC
Q 017640 224 ILPIEEIVHWSHDVGAKVLVDACQSVPH---MVV-DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g~~li~D~a~~~~~---~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~ 297 (368)
++|.+++.++++.. +++|+|++|..-. ... .+...+..+++.|+||.||.+| +||++.++++++.+......
T Consensus 191 ~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~- 268 (380)
T PLN03026 191 IISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP- 268 (380)
T ss_pred CCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHhhcCccccceeeecCHHHHHHHHHhcCC-
Confidence 99999999999765 8999999986211 111 1223356789999999999888 99999999888776533211
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
...+..+..++..+++... -++.++++..+..+++.+.|+++.
T Consensus 269 ----------------------~~~~~~~q~aa~~aL~~~~--~~~~~~~~~~~~r~~l~~~L~~~~ 311 (380)
T PLN03026 269 ----------------------YNVSVAAEVAACAALSNPK--YLEDVKNALVEERERLFGLLKEVP 311 (380)
T ss_pred ----------------------CCCCHHHHHHHHHHhhCHH--HHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1345555566666664321 145667777778888888887764
No 50
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.95 E-value=4.5e-26 Score=216.41 Aligned_cols=261 Identities=18% Similarity=0.178 Sum_probs=186.7
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKN 137 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g 137 (368)
+++++.|+.+.++ .+++.+.+++.+.+.... . ..+.. .....++|+.+++++ |.+ ++++|++|+|
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~Y~~----~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G 99 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAENPE--N--HRYPS----YEGMLAYRQAVADWYKRRFGVELDPETEVLSLIG 99 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCC--C--CCCCC----CCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCC
Confidence 3678899998877 467888888887765310 0 01111 111235666666665 443 3236899999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
+++++..++.++ +++||+|++.+|+|+... ..++..|++++.++.+++ +.+|++++++++.+++++|+++
T Consensus 100 ~~~~l~~~~~~~----~~~gd~vlv~~P~y~~~~----~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~ 171 (383)
T TIGR03540 100 SKEGIAHIPLAF----VNPGDIVLVPDPGYPVYR----IGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFIN 171 (383)
T ss_pred cHHHHHHHHHHh----CCCCCEEEEeCCCCcchH----HHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEe
Confidence 999999999988 899999999999988843 445667999999998743 5679999999998889999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcC----Cccccc---CCC-CCccEEEecCcCcCCCCc--ceEEEE
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHMVVD---VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~~~~~~---~~~-~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+|+||||.+++ +++|.++|++||+++|+|++|.. +..... +.. .+..+++.|+||.||.+| +||++.
T Consensus 172 ~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~ 251 (383)
T TIGR03540 172 YPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG 251 (383)
T ss_pred CCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC
Confidence 99999999999 68899999999999999999972 111111 121 235688899999999999 999999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+...... . ..+.+.+...++..+++...+ -++.++++..+..+.+.+.|++
T Consensus 252 ~~~l~~~~~~~~~~--------------------~-~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~ 309 (383)
T TIGR03540 252 NADLIAGLGKVKTN--------------------V-DSGVFQAIQYAAIAALNGPQD-VVKEIRKIYQRRRDLLLEALKK 309 (383)
T ss_pred CHHHHHHHHHHHHh--------------------c-ccCCChHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 99888776543210 0 112333444455555543222 2456667777888888888876
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 310 ~ 310 (383)
T TIGR03540 310 I 310 (383)
T ss_pred C
Confidence 5
No 51
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5.2e-26 Score=215.73 Aligned_cols=259 Identities=17% Similarity=0.176 Sum_probs=192.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+.|.|+.+.+. ++++.+.+++.+.+.....+. +...+...++|+++++++|.+++ +|++|+|+++++..
T Consensus 28 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~--------y~~~~g~~~lr~~ia~~l~~~~~-~v~~~~g~t~al~~ 98 (380)
T PRK06225 28 KEMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCK--------YPPPEGFPELRELILKDLGLDDD-EALITAGATESLYL 98 (380)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCC--------CCCCcchHHHHHHHHHhcCCCCC-cEEEeCCHHHHHHH
Confidence 578999988776 678889999888876421111 11123456899999999999875 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC---CCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND---DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~---~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
++.++ +.+||+|++.+|.|.. +...++..|++++.++++. ++.+|++.+++.+.++++++++++++|||
T Consensus 99 ~~~~~----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~Npt 170 (380)
T PRK06225 99 VMRAF----LSPGDNAVTPDPGYLI----IDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPL 170 (380)
T ss_pred HHHHh----cCCCCEEEEcCCCCcc----hHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCC
Confidence 99988 7899999999998875 3445567799999998742 36789999999999899999999999999
Q ss_pred ccccC---HHHHHHHHHhcCCEEEEecCCc---CCcccc-cCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCC
Q 017640 222 ASILP---IEEIVHWSHDVGAKVLVDACQS---VPHMVV-DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 222 G~~~~---l~~i~~l~~~~g~~li~D~a~~---~~~~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~ 292 (368)
|.+++ +++|.++|++||+++|+|++|. .+..+. .. ..+..+++.|++|++|++| +|++++++++++.+++
T Consensus 171 G~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~ 249 (380)
T PRK06225 171 GSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEY-APEHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKS 249 (380)
T ss_pred CcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhc-CCCCEEEEeechhhcCCccceeEEEecCHHHHHHHHH
Confidence 99998 7889999999999999999975 122111 11 1245688889999999888 8999999998877664
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
...+ ....+..+..++..+++..... .+.+++..++..+++.+.|++++|
T Consensus 250 ~~~~----------------------~~~~~~~~~~~a~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 250 IVIN----------------------DLGTNVIAQEAAIAGLKVKDEW-IDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred HHhc----------------------ccCCCHHHHHHHHHHHhcchHH-HHHHHHHHHHHHHHHHHHHHhCcC
Confidence 3211 0123444555555555432222 355566666667777777777555
No 52
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.9e-26 Score=214.14 Aligned_cols=256 Identities=17% Similarity=0.214 Sum_probs=191.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
..+.|+.+.+. ++|+.+.+++.+.+.....+ .+. .....++|+.++++++++++ +|++|+|+++++..+
T Consensus 23 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~----~y~-----~~~~~~lr~~ia~~~~~~~~-~i~it~G~~~~l~~~ 92 (351)
T PRK14807 23 YKYKMDANETPFELPEEVIKNIQEIVKSSQVN----IYP-----DPTAEKLREELARYCSVVPT-NIFVGNGSDEIIHLI 92 (351)
T ss_pred ceeEccCCCCCCCCCHHHHHHHHHHhhcCccc----CCC-----CccHHHHHHHHHHHhCCCcc-cEEEecCHHHHHHHH
Confidence 45778888877 67899999988876531111 111 11235799999999998765 999999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASI 224 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~ 224 (368)
+.++ +++||+|++.+|.|.. +...++..|++++.++.++++.+|++.+++++++ ++++|++++++||||.+
T Consensus 93 ~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~ 164 (351)
T PRK14807 93 MLAF----INKGDVVIYPHPSFAM----YSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSV 164 (351)
T ss_pred HHHh----cCCCCEEEEeCCChHH----HHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCC
Confidence 9988 8999999999997664 5566677899999999987788999999999975 89999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcC--Cccccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCCcc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSV--PHMVVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~--~~~~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
++.+++.++|++++.++|+|++|.. +....+ ....+..++++|+||.+|.+| +||++.++++++.+......
T Consensus 165 ~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~--- 241 (351)
T PRK14807 165 IEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSP--- 241 (351)
T ss_pred CCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHHHHccCC---
Confidence 9999999999998889999999962 111111 122346799999999999888 99999999888766533210
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
...+.....++..+++ ....++..++..+..+++.+.|.+.+|+
T Consensus 242 --------------------~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~r~~l~~~l~~~~g~ 285 (351)
T PRK14807 242 --------------------YNINSLSQVIALKVLR---TGVLKERVNYILNERERLIKELSKIPGI 285 (351)
T ss_pred --------------------CCcCHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1233444444444443 3224455556667777788888766554
No 53
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.95 E-value=5.5e-26 Score=215.81 Aligned_cols=266 Identities=16% Similarity=0.119 Sum_probs=191.1
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN--ASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~~~~~v~~t~g~t~a~ 142 (368)
++++.|+.+.+. ++++.+.+++.+.+.... . .+....+..+..+.+.+.+.+.+| .++ ++|++|+|+++++
T Consensus 24 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~--~---~Y~~~~G~~~lr~~la~~~~~~~~~~~~~-~~i~~t~g~~~al 97 (382)
T PRK06108 24 EGVLPLWFGESDLPTPDFIRDAAAAALADGE--T---FYTHNLGIPELREALARYVSRLHGVATPP-ERIAVTSSGVQAL 97 (382)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC--C---CCCCCCCCHHHHHHHHHHHHHHhCCCcCc-ceEEEeCChHHHH
Confidence 467899998877 568889999888765421 0 111111223333344444444457 434 4999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC---CCCCCHHHHHHhcccCceEEEEccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND---DESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~---~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
..++.++ +++||.|++.+|+|+... ..++..|++++.++.+. ++.+|++++++.++++++++++++++|
T Consensus 98 ~~~~~~l----~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~N 169 (382)
T PRK06108 98 MLAAQAL----VGPGDEVVAVTPLWPNLV----AAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNN 169 (382)
T ss_pred HHHHHHh----cCCCCEEEEeCCCccchH----HHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCC
Confidence 9999988 889999999999888743 44566799999999873 356899999999988899999999999
Q ss_pred ccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc--------ccCCC-CCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 220 MLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV--------VDVQG-LDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 220 ~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~--------~~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
|||.++| +++|.++|+++|+++|+|++|+..... .++.. .+..+++.|+||.||.+| +||++++++
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~ 249 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPA 249 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHH
Confidence 9999998 678999999999999999998743211 12221 245688999999998777 899999998
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+++.+..... +.....+.....++..+++...+ .++.++++.+++.+++.+.|.+.+|
T Consensus 250 ~~~~~~~~~~---------------------~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~ 307 (382)
T PRK06108 250 LGQVLEKLIE---------------------YNTSCVAQFVQRAAVAALDEGED-FVAELVARLRRSRDHLVDALRALPG 307 (382)
T ss_pred HHHHHHHHHH---------------------hcccCCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 8877654321 00112344444445555543222 2567788888889999999987766
Q ss_pred CC
Q 017640 366 TT 367 (368)
Q Consensus 366 ~t 367 (368)
++
T Consensus 308 ~~ 309 (382)
T PRK06108 308 VE 309 (382)
T ss_pred Cc
Confidence 54
No 54
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.4e-26 Score=214.18 Aligned_cols=252 Identities=15% Similarity=0.161 Sum_probs=192.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH-hhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+++++|+.+... ++++.+.+++.+.+.. ...++.. ...++|++++++++.+++ +|++|+|+++++.
T Consensus 24 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~~~-----------~~~~lr~aia~~~~~~~~-~I~it~G~~~al~ 91 (353)
T PRK05387 24 AKLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDP-----------NADALRQAIAAYYGLDPE-QVFVGNGSDEVLA 91 (353)
T ss_pred cceeeccCCCCCCCCCHHHHHHHHHHhhhhhhcCCCC-----------cHHHHHHHHHHHhCCCHH-HEEEcCCHHHHHH
Confidence 567999999877 4578899999877653 2222221 124899999999998764 9999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
+++.++ +++||+|++++|+|+. +...++..|++++.++.++++.+|++++++ .+++|++++|+||||.
T Consensus 92 ~~~~~l----~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~----~~~~v~~~~P~NPtG~ 159 (353)
T PRK05387 92 HAFLAF----FNHDRPLLFPDITYSF----YPVYAGLYGIPYEEIPLDDDFSIDVEDYLR----PNGGIIFPNPNAPTGI 159 (353)
T ss_pred HHHHHh----cCCCCEEEEeCCCHHH----HHHHHHHcCCEEEEeecCCCCCCCHHHHHh----cCCEEEEeCCCCCCCC
Confidence 999998 8999999999997754 455567779999999998888899999874 4578999999999999
Q ss_pred ccCHHHHHHHHHhc-CCEEEEecCCcC-Ccc-ccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCC
Q 017640 224 ILPIEEIVHWSHDV-GAKVLVDACQSV-PHM-VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 224 ~~~l~~i~~l~~~~-g~~li~D~a~~~-~~~-~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~ 297 (368)
++|.+++.++++.+ ++++|+|++|.. +.. ... ....+.+++++|+||.+|.+| +||+++++++++.++....
T Consensus 160 ~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~-- 237 (353)
T PRK05387 160 ALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPELIEALNRVKN-- 237 (353)
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhhcchhhhceeeecCHHHHHHHHHhhc--
Confidence 99999999999875 999999999862 111 111 122346799999999999888 9999999988877654321
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+...+.+...+.++..+++... ..++.+++..+..+++.+.|++.
T Consensus 238 ------------------~~~~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~ 283 (353)
T PRK05387 238 ------------------SFNSYPLDRLAQAGAIAAIEDEA--YFEETRAKVIATRERLVEELEAL 283 (353)
T ss_pred ------------------cCCCCCcCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHC
Confidence 11122556666666666664211 24567777888888888888775
No 55
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.95 E-value=8e-26 Score=213.45 Aligned_cols=270 Identities=18% Similarity=0.174 Sum_probs=194.2
Q ss_pred CeEEeccC-CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 67 KLVYLDNA-ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 67 ~~i~l~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
+.++++.- ..|.+.+.+.+++.++......... ..........+...++++.+|+++|.+ .+++++|+++++..+
T Consensus 7 ~~~~~~~~~~~g~~~~~~~~a~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~e~lA~~~g~~---~~~i~~g~~~a~~~~ 82 (370)
T TIGR02539 7 GSINLNPLQRGGVLTEAARKALVEFGDGYSVCDF-CGGRLDQITKPPIHDFLEDLAEFLGMD---EARVTHGAREGKFAV 82 (370)
T ss_pred cccccChhhhCCCCcHHHHHHHHHHhhccccccc-cccccccccchHHHHHHHHHHHHhCCC---ceEEECChHHHHHHH
Confidence 44566653 2457888888888877553211111 011111223445668899999999997 456789999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhccc-------CceEEEEcc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR-------KTKLVVIHH 216 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~-------~~~~v~~~~ 216 (368)
+.++ +++||.|++..++|++.+. .++..|++++.++.++ ++.+|+++|++++++ ++++|++++
T Consensus 83 ~~~l----~~~gd~Vl~~~~~h~s~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~ 154 (370)
T TIGR02539 83 MHAL----CKEGDWVVLDGLAHYTSYV----AAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTH 154 (370)
T ss_pred HHHh----hCCCCEEEECCcccHHHHH----HHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEEC
Confidence 9998 7899999999999988653 3567799999999863 478899999999863 678999999
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCc-ceEEEEcccccccCCCccc
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G-~G~l~~~~~li~~l~~~~~ 295 (368)
++|+||...|+++|.++|+++|+++++|++|+.|..+.+....+.|++++|+||++++.| +|++++++++++.++....
T Consensus 155 p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~ 234 (370)
T TIGR02539 155 VDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSR 234 (370)
T ss_pred CCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhccccc
Confidence 999999999999999999999999999999999876666555679999999999888644 8999999999988875543
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.... ..+..++....+..++..+++...+ .++...+. .++.+++.+.|.++
T Consensus 235 ~~~~~~-------------~~~~~~~~~~~~~~~~~~al~~~~~-~l~~~~~~-~~~~~~l~~~L~~~ 287 (370)
T TIGR02539 235 YSPVKE-------------VELLGCTSRGAPIVTMMASFPHVVE-RVKRWDEE-VKKTRWFVAELEDI 287 (370)
T ss_pred CCccce-------------eeeecccccccHHHHHHHHHHHHHH-HHHHHHHH-HHHHHHHHHHHHhC
Confidence 222100 0111233333445555556654332 13333333 34456888888775
No 56
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=4.4e-26 Score=214.39 Aligned_cols=256 Identities=13% Similarity=0.137 Sum_probs=196.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.++++|+.+.++ ++|+.+++++.+.+.. ...++.. ...++|+.++++++.+.+++|++|+|+++++
T Consensus 26 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----------~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i 94 (356)
T PRK04870 26 TGMVKLDAMENPYRLPAELRAELGERLAEVALNRYPDP-----------RAAALKAALRAAMGVPAGADVLLGNGSDELI 94 (356)
T ss_pred CCceeCcCCCCCCCCCHHHHHHHHHHhhccccccCCCC-----------CHHHHHHHHHHHhCcCCCCcEEEcCCHHHHH
Confidence 578999999887 6899999999887753 2222211 1247999999999987545899999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNML 221 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t 221 (368)
..++.++ +++||+|++++|.|.. +...++..|++++.+++++++.+|++.+++++.. ++++|++++++|||
T Consensus 95 ~~~~~~~----~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPt 166 (356)
T PRK04870 95 QLLALAC----AKPGATVLAPEPGFVM----YRMSAKLAGLEFVGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPT 166 (356)
T ss_pred HHHHHHh----cCCCCEEEECCCCHHH----HHHHHHHcCCEEEEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCC
Confidence 9999988 7999999999996664 5667788899999999988889999999999864 78999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcc-c--ccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccC
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHM-V--VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~--~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g 296 (368)
|.++|.+++.++++..+.++|+|++|..-.. . ..+...+..+++.|+|| +|.+| +||+++++++++.+......
T Consensus 167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~ 245 (356)
T PRK04870 167 GNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPP 245 (356)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHHHHHHccCC
Confidence 9999988888888777889999999862111 1 11223346789999999 89888 99999999888776643321
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+ +.+.....++..+++.... ++...++.++..+++.+.|++.+|+
T Consensus 246 ~-----------------------~~~~~~q~~a~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~ 290 (356)
T PRK04870 246 Y-----------------------NVNVLTQATALFALEHVDV--LDAQAAQLRAERTRLAAALAALPGV 290 (356)
T ss_pred C-----------------------cCCHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1 2344444445555543222 5666777788888888888876564
No 57
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.95 E-value=8.5e-26 Score=195.30 Aligned_cols=277 Identities=16% Similarity=0.168 Sum_probs=229.9
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHcc
Q 017640 71 LDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWG 150 (368)
Q Consensus 71 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~ 150 (368)
|-..++.-+++.|.+++.+.. ...+++.+.+..+++++-+...|....+...++..+++.+++.++.-+
T Consensus 20 L~gPGPsnl~~~V~~A~~~~~----------lgh~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~- 88 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEAMSRPS----------LGHMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNL- 88 (385)
T ss_pred eecCCCcCCCHHHHHhhcCCc----------cccCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhh-
Confidence 334445566777777764331 235667788999999999999999887767788888899999999888
Q ss_pred CCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccC-HH
Q 017640 151 LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILP-IE 228 (368)
Q Consensus 151 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~-l~ 228 (368)
+.|||.|++....-.+.. +...++++|++|..|+.+......++.+++++.+ ++++|+++|..+.||+..| ++
T Consensus 89 ---lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~ 163 (385)
T KOG2862|consen 89 ---LEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLA 163 (385)
T ss_pred ---cCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccCccHHHHHHHHHhcCCceEEEEecCccccccchHHH
Confidence 899999999988776654 6778899999999999888888899999999987 5799999999999999999 78
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
.+.++||+|++++++|.+.++|..++.++++++|+.....+|.+| |+|++++..+++..++++....+.....+.....
T Consensus 164 ~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~ 243 (385)
T KOG2862|consen 164 ISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRL 243 (385)
T ss_pred HHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhh
Confidence 899999999999999999999999999999999999999999655 8899999999988888876665444333222221
Q ss_pred CCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 308 STF--ADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 308 ~~~--~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
-.+ -..+-+....|+++..++++.+||+.+.++|+++..++.++++++++..|++.
T Consensus 244 ~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~ 301 (385)
T KOG2862|consen 244 GNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL 301 (385)
T ss_pred cchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 12233666779999999999999999999999999999999999999999874
No 58
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=3.6e-26 Score=215.10 Aligned_cols=251 Identities=15% Similarity=0.155 Sum_probs=186.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+.+.|+.+.+. ++|+.+++++.+.+.....+|.. ...++|+.++++++++++ +|++|+|+++++.+
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~~~Yp~~-----------g~~~Lr~aia~~~~~~~~-~I~vt~Gs~e~i~~ 96 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDHALYPDG-----------GATTLRQTIANKLHVKME-QVLCGSGLDEVIQI 96 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhcCcCCCC-----------CHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHH
Confidence 567999999888 68889999998776543333322 123799999999999875 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||.|++.+|.|+. +...++..|++++.++.+ ++.+|+++|+++++++++++++++|+||||.+
T Consensus 97 ~~~~l----~~~gd~vlv~~P~y~~----~~~~~~~~g~~v~~v~~~-~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~ 167 (366)
T PRK01533 97 ISRAV----LKAGDNIVTAGATFPQ----YRHHAIIEGCEVKEVALN-NGVYDLDEISSVVDNDTKIVWICNPNNPTGTY 167 (366)
T ss_pred HHHHh----cCCCCEEEEcCCcHHH----HHHHHHHcCCEEEEeecC-CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCC
Confidence 99998 8999999999996655 566677789999999985 45689999999998889999999999999999
Q ss_pred cCHHHHHHHH---HhcCCEEEEecCCcCCcc------ccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCC
Q 017640 225 LPIEEIVHWS---HDVGAKVLVDACQSVPHM------VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 225 ~~l~~i~~l~---~~~g~~li~D~a~~~~~~------~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~ 292 (368)
++.+++.+++ ++++ ++|+|++|..-.. .+. +...+..+++.|+||.||.+| +||+++++++++.+..
T Consensus 168 ~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~ 246 (366)
T PRK01533 168 VNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNV 246 (366)
T ss_pred cCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHH
Confidence 9966555554 4555 6778999862110 111 122346789999999999888 9999999988877664
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
... ....+..+..++..+++... -.+.+++...+..+++.+.+++.
T Consensus 247 ~~~-----------------------~~~~~~~~q~aa~~~l~~~~--~~~~~~~~~~~~r~~~~~~l~~~ 292 (366)
T PRK01533 247 VRL-----------------------PFNVSSLAQKAATIAFGDDE--FIEEIVRVNTEGLRQYESFCKEN 292 (366)
T ss_pred hcC-----------------------CCCcCHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHhC
Confidence 321 12456666666666664211 13445555566666666666554
No 59
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=6.8e-26 Score=219.33 Aligned_cols=289 Identities=18% Similarity=0.194 Sum_probs=212.8
Q ss_pred CeEEeccCCCCC-CcHHHHHHHHH--HHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATSQ-KPIAVLKALQN--YYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~~-~~~~v~~a~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
...+++.+.+.. .|..+.+.... ....+ +++.. ....+..+.+.+.++++++++|.+.. ++++|+|+|+++.
T Consensus 69 ~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~y--~~~~~--~~~~g~~~~~~e~~~~la~l~g~~~~-~v~~~~g~t~~~~ 143 (447)
T PRK00451 69 YPSFLGAGAYDHYIPAVVDHIISRSEFYTAY--TPYQP--EISQGTLQAIFEYQTMICELTGMDVA-NASMYDGATALAE 143 (447)
T ss_pred CcccCcccccCCcCcHHHHHHHhchhHHHhc--CCCCC--ccchHHHHHHHHHHHHHHHHhCCCcc-eEEecCcHHHHHH
Confidence 445666665553 34444444322 22222 22111 12344567777888999999999865 8999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
.++.++ ..++||+|++++++|+++...+..+++..|++++.++.+++ .+|++++++++++++++|+++++ |+||.
T Consensus 144 ~~~~a~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~d~~~l~~~i~~~t~~v~l~~p-n~tG~ 218 (447)
T PRK00451 144 AALMAV---RITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VTDLEALEAAVDDDTAAVVVQYP-NFFGV 218 (447)
T ss_pred HHHHHH---HhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CCCHHHHHHhcCCCeEEEEEECC-CCCCe
Confidence 998887 24789999999999999888888777788999999999887 89999999999999999999998 89999
Q ss_pred ccCHHHHHHHHHhcCCEEEE--ecCCcCCcccccCCCCCccEEEecCcCc-----CCCCcceEEEEcccccccCCCcccC
Q 017640 224 ILPIEEIVHWSHDVGAKVLV--DACQSVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g~~li~--D~a~~~~~~~~~~~~~~~d~~~~s~~K~-----~g~~G~G~l~~~~~li~~l~~~~~g 296 (368)
+.|+++|.++|+++|+++++ |.. +.|... ....+++|++++|.+|+ +|++|+|++++++++++.+.+...|
T Consensus 219 v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~-~~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g 296 (447)
T PRK00451 219 IEDLEEIAEIAHAGGALFIVGVDPV-SLGLLK-PPGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVG 296 (447)
T ss_pred eCCHHHHHHHHHHCCCEEEEEcChH-HhccCC-CcccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEee
Confidence 99999999999999999988 544 344432 23567899999987774 5666899999999999998888777
Q ss_pred CcceeecccCC---CCCCCCCCCCCCCCCCHHH-----HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 297 GEMISDVFLDH---STFADPPSRFEAGTPAIGE-----AIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 297 ~~~~~~~~~~~---~~~~~~~~~~~~gt~~~~~-----~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
++........+ ........+++.++.++.. ..+...+++++.+.|++++.++..++++++.+.|.+++|++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 375 (447)
T PRK00451 297 ETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVE 375 (447)
T ss_pred eecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEE
Confidence 74322110000 0112223455555655532 23344456667777899999999999999999999887764
No 60
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=1.3e-25 Score=214.76 Aligned_cols=259 Identities=18% Similarity=0.137 Sum_probs=190.6
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g~ 138 (368)
.+.+.|..+.+. ++++.+.+++.+.+... .. .|.. .....++|+++++++ |.+ ++++|++|+|+
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~-~~----~Y~~----~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~ 124 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDG-KN----QYAR----GFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGC 124 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcC-CC----CcCC----CCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCH
Confidence 568999998877 55788888888877641 11 1111 112235556666555 543 32369999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
++|+..++.++ +++||+|++.+|.|+. +...++..|++++.+++++ ++.+|++.|++++.+++++|+++++
T Consensus 125 ~~al~~~~~~l----~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p 196 (413)
T PLN00175 125 TEAIAATILGL----INPGDEVILFAPFYDS----YEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTP 196 (413)
T ss_pred HHHHHHHHHHh----CCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCC
Confidence 99999999988 8999999999997776 4555667799999999874 5788999999999889999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
+||||.+++ +++|.++|++||+++|+|++|..... ++ ++.. .+..++++|+||.||.+| +||++++++
T Consensus 197 ~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~ 276 (413)
T PLN00175 197 HNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH 276 (413)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHH
Confidence 999999998 67889999999999999999874221 11 2221 246789999999999888 999999999
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+..... +...+.+.+...++..+++..+. -++.++++.++..+.+.+.|.+.
T Consensus 277 l~~~l~~~~~---------------------~~~~~~s~~~Q~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 332 (413)
T PLN00175 277 LTWGVRQAHS---------------------FLTFATATPMQWAAVAALRAPES-YYEELKRDYSAKKDILVEGLKEV 332 (413)
T ss_pred HHHHHHHHHh---------------------hccCCCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 8877653321 11124455556666666643222 25667777888888888888775
No 61
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.2e-25 Score=214.55 Aligned_cols=267 Identities=16% Similarity=0.147 Sum_probs=186.8
Q ss_pred CCeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CC-CcEEEeCCHHHH
Q 017640 66 KKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DS-GEIVFTKNATEA 141 (368)
Q Consensus 66 ~~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~-~~v~~t~g~t~a 141 (368)
++.++|+.+... .+++.+.+++.+.+..... ..|....+..++.+.+.+.+++.+|.+ .+ ++|++|+|++++
T Consensus 39 ~~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~----~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 39 GRPVDFSHGDVDAHEPTPGAFELFSAGVERGGV----QAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCceecCCcCCCCCCCCHHHHHHHHHHHhcCCC----ccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 567899988766 3667888888777653211 011111122444555666666666864 22 589999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-----CCCCCCHHHHHHhcccCceEEEEcc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-----DDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-----~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
+..++.++ +++||+|++.+|.|+. +...++..|++++.++++ .++.+|++.|++++.+++++|++++
T Consensus 115 l~~~~~~l----~~~Gd~Vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~ 186 (405)
T PRK06207 115 LFLAVAAT----VARGDKVAIVQPDYFA----NRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSN 186 (405)
T ss_pred HHHHHHHh----cCCCCEEEEeCCCchh----HHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECC
Confidence 99999988 8999999999998877 445566779999999986 2478899999999988899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----c--cc-cCC-CCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M--VV-DVQ-GLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~--~~-~~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
|+||||.+++ +++|+++|++||++||+|++|..-. . ++ .+. ..+..+++.|+||.||.+| +||++.+
T Consensus 187 P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~ 266 (405)
T PRK06207 187 PNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS 266 (405)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC
Confidence 9999999999 6788889999999999999998421 1 11 111 1245689999999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+...... +.. ..+.....++..+++.-.. -++...++..+..+++.+.|.++
T Consensus 267 ~~l~~~~~~~~~~--------------------~~~-~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~r~~l~~~L~~~ 324 (405)
T PRK06207 267 PAIIDRMEKLQAI--------------------VSL-RAAGYSQAVLRTWFSEPDG-WMKDRIARHQAIRDDLLRVLRGV 324 (405)
T ss_pred HHHHHHHHHHHhH--------------------hcc-CCCHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 9888776643210 001 2233334444444431101 13444455566677777777765
Q ss_pred cCC
Q 017640 364 HNT 366 (368)
Q Consensus 364 ~g~ 366 (368)
+++
T Consensus 325 ~~~ 327 (405)
T PRK06207 325 EGV 327 (405)
T ss_pred CCc
Confidence 443
No 62
>PRK07324 transaminase; Validated
Probab=99.95 E-value=1.9e-26 Score=217.79 Aligned_cols=260 Identities=17% Similarity=0.176 Sum_probs=186.6
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC-CCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-ASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-~~~~~~v~~t~g~t~a~ 142 (368)
+.+++.|.-+... +.|+.+ ++..+.+..... ++.......++|+.++++++ .++ ++|++|+|+++|+
T Consensus 25 ~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~---------~Y~~~~G~~~lr~~ia~~~~~~~~-~~vi~t~G~~~al 93 (373)
T PRK07324 25 ESCIDSLTLEELLALAGKNP-EAFYQELGQKKL---------TYGWIEGSPEFKEAVASLYQNVKP-ENILQTNGATGAN 93 (373)
T ss_pred cCCCCCCcHHHHHhccCcch-HHHHHHHhcCCc---------cCCCCCCCHHHHHHHHHHhcCCCh-hhEEEcCChHHHH
Confidence 4678888877766 445555 776666553210 01111223489999999886 444 5999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
.+++.++ +++||+|++..|.|.+ +...++..|++++.++++++ +.+|++++++.+.+++++|++++++||
T Consensus 94 ~~~~~~l----~~~gd~Vl~~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NP 165 (373)
T PRK07324 94 FLVLYAL----VEPGDHVISVYPTYQQ----LYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNP 165 (373)
T ss_pred HHHHHHh----CCCCCEEEEcCCCchh----HHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCC
Confidence 9999998 8999999999998776 44556777999999998753 568999999999889999999999999
Q ss_pred cccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccC-CCCCccEEEecCcCcCCCCc--ceEEEEcccccccCC
Q 017640 221 LASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMP 291 (368)
Q Consensus 221 tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~ 291 (368)
||.+++ +++|+++|++||+++|+|++|..-.. ..++ ...+..+++.|+||.||.+| +||+++++++++.++
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~ 245 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAANEEVIDILR 245 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEecCHHHHHHHH
Confidence 999999 88999999999999999999863111 0111 11235688899999999888 899999988887766
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
....... -+.+..+..++..+++..+. -++..++..++..+.+.+.+.+.++
T Consensus 246 ~~~~~~~---------------------~~~~~~~q~~a~~~l~~~~~-~l~~~~~~~~~~~~~l~~~l~~~~~ 297 (373)
T PRK07324 246 KYRDYTM---------------------ICAGVFDDMLASLALEHRDA-ILERNRKIVRTNLAILDEWVAKEPR 297 (373)
T ss_pred HHhCcEE---------------------ecCChHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 4432100 12333444444445543222 2455566666677777777776544
No 63
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.95 E-value=1.7e-25 Score=214.67 Aligned_cols=264 Identities=15% Similarity=0.157 Sum_probs=191.2
Q ss_pred CCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcEEEe
Q 017640 66 KKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~t 135 (368)
..+|+|+.+.+. ++++.+.+++.+.+.....+.+ .......++|++++++++.. ++++|++|
T Consensus 52 ~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y--------~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it 123 (430)
T PLN00145 52 RPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSY--------STCVGLLPARRAIAEYLSRDLPYELSTDDIYLT 123 (430)
T ss_pred CCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCC--------CCCccCHHHHHHHHHHHhhccCCCCChhhEEEe
Confidence 579999999763 5678899999888764211111 11233447888888888542 23599999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcccCceEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~v~ 213 (368)
+|+++|+.+++.++ .++||+|++++|.|+. +...+...|++++.+++. .++.+|++.+++.+++++++++
T Consensus 124 ~G~~~al~l~~~~l----~~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~ 195 (430)
T PLN00145 124 AGCAQAIEIIMSVL----AQPGANILLPRPGYPL----YEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMV 195 (430)
T ss_pred CCHHHHHHHHHHHh----cCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEE
Confidence 99999999999998 7899999999998887 344556679999999875 3478999999999999999999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCCCCccEEEecCcCcCCCCc--ceEEE
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+++|+||||.++| +++|.++|++||++||+|++|..-. .++ .+......++++|+||.|+.+| +||++
T Consensus 196 i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv 275 (430)
T PLN00145 196 IINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWRLGWIA 275 (430)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCeeEEEEE
Confidence 9999999999999 7888999999999999999987321 111 1222346789999999999999 99999
Q ss_pred Ec--cccccc------CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 282 GK--SDLLSA------MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 282 ~~--~~li~~------l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
+. +.+++. ++.... ....++...+.++..+++.-.+.-.+..+++.++.+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~ 333 (430)
T PLN00145 276 TCDPNGILKETKVVDSIRNYLN----------------------ISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETA 333 (430)
T ss_pred EecchhhhhhhHHHHHHHHHhc----------------------ccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 73 333322 111110 011234555555555555311223566777788888
Q ss_pred HHHHHHHHhhcCCC
Q 017640 354 ICSIIVIQERHNTT 367 (368)
Q Consensus 354 ~~l~~~l~~~~g~t 367 (368)
+++.+.|.+++|++
T Consensus 334 ~~~~~~L~~~~g~~ 347 (430)
T PLN00145 334 DICYEKIKEIKCIT 347 (430)
T ss_pred HHHHHHHhcCCCCC
Confidence 88888888876653
No 64
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2e-25 Score=212.92 Aligned_cols=256 Identities=16% Similarity=0.210 Sum_probs=186.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHh--hccCCCCcchhhHHHHHHHHHHHHHHHHHc----CC---CCCCcEEEe
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAY--NSNVHRGIHFLSAKATDEYELARKKVAAFI----NA---SDSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~---~~~~~v~~t 135 (368)
.+++.|+.+.+. .+++.+.+++.+.+... ..++. ....++|+++++++ |. +++++|++|
T Consensus 44 ~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~~-----------~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it 112 (410)
T PRK06290 44 MELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYAD-----------NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHS 112 (410)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCC-----------CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEc
Confidence 568999998877 46777888877655321 11111 12336777777765 53 333379999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~ 213 (368)
+|+++++..++.++ +++||.|++++|.|+. +...++..|++++.++++++ +.+|++.+++++.+++++|+
T Consensus 113 ~Gs~~al~~~~~~~----~~~gd~Vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~ 184 (410)
T PRK06290 113 IGSKPALAMLPSCF----INPGDVTLMTVPGYPV----TGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLY 184 (410)
T ss_pred cCHHHHHHHHHHHh----CCCCCEEEEeCCCCcc----HHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEE
Confidence 99999999999988 8999999999998877 44556667999999999753 66799999999988899999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cc-cCCC-CCccEEEecCcCcCCCCc--ceEEE
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DVQG-LDADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+++|+||||.+++ +++|.++|++||++||+|++|..... ++ .+.. .+.++++.|+||.+|.+| +||++
T Consensus 185 l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii 264 (410)
T PRK06290 185 LNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVV 264 (410)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhheEeEE
Confidence 9999999999999 67888889999999999999884221 11 1221 246799999999999888 99999
Q ss_pred EcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 017640 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 282 ~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+++++++.+....... .. +.+.+...++..+++.-. -.+.++++..+..+++.+.|+
T Consensus 265 ~~~~l~~~l~~~~~~~--------------------~~-~~~~~~q~aa~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~ 321 (410)
T PRK06290 265 GNELIVKAFATVKDNN--------------------DS-GQFIAIQKAGIYALDHPE--ITEKIREKYSRRLDKLVKILN 321 (410)
T ss_pred eCHHHHHHHHHHHhcc--------------------cc-CCcHHHHHHHHHHhhCcH--HHHHHHHHHHHHHHHHHHHHH
Confidence 9998887665332211 11 223334444444443211 145667777788888888887
Q ss_pred hh
Q 017640 362 ER 363 (368)
Q Consensus 362 ~~ 363 (368)
+.
T Consensus 322 ~~ 323 (410)
T PRK06290 322 EV 323 (410)
T ss_pred hC
Confidence 64
No 65
>PLN02187 rooty/superroot1
Probab=99.94 E-value=1.8e-25 Score=216.08 Aligned_cols=264 Identities=14% Similarity=0.160 Sum_probs=189.2
Q ss_pred CCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEE
Q 017640 66 KKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVF 134 (368)
Q Consensus 66 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~ 134 (368)
+++++|+.+.+. ..++.+.+++.+.+.....+ . +.......++|+++|++++ +++ ++|++
T Consensus 66 ~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~----~----Y~~~~G~~~lR~aiA~~~~~~~~~~~~~-~~I~i 136 (462)
T PLN02187 66 KTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGN----S----YGPGAGILPARRAVADYMNRDLPHKLTP-EDIFL 136 (462)
T ss_pred CCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCC----C----CCCCCChHHHHHHHHHHHHHhcCCCCCc-ccEEE
Confidence 789999999654 34567888888776532111 1 1112234468888888874 334 59999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcccCceEE
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~v 212 (368)
|+|+++++.+++.++ +++||.|++++|+|+. +...++..|++++.+++. .++.+|+++|+++++++++++
T Consensus 137 t~G~~~al~~~~~~l----~~pGd~Vlv~~P~y~~----y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v 208 (462)
T PLN02187 137 TAGCNQGIEIVFESL----ARPNANILLPRPGFPH----YDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAM 208 (462)
T ss_pred eCCHHHHHHHHHHHh----cCCCCEEEEeCCCCcc----HHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEE
Confidence 999999999999998 8999999999998887 444566779999999985 358899999999998899999
Q ss_pred EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++|+||||.+++ +++|+++|++||++||+|++|..-.. ++ .+......++++|+||.|+.+| +||+
T Consensus 209 ~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~ 288 (462)
T PLN02187 209 VVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWI 288 (462)
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEE
Confidence 99999999999999 78899999999999999999973111 11 1122234688899999999999 9999
Q ss_pred EEc-cc-c---cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 281 FGK-SD-L---LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 281 ~~~-~~-l---i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
++. ++ + ++.+......+. . ...++.....++..+++.....-++.+++..++..++
T Consensus 289 v~~~p~~~~~~~~~~~~~~~~~~------------------~-~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~ 349 (462)
T PLN02187 289 ALNDPEGVFETTKVLQSIKQNLD------------------V-TPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDL 349 (462)
T ss_pred EecCchhHHHHHHHHHHHHHhcc------------------c-cCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 984 32 2 223322211000 0 1124556666666666421112256667777788888
Q ss_pred HHHHHHhhcC
Q 017640 356 SIIVIQERHN 365 (368)
Q Consensus 356 l~~~l~~~~g 365 (368)
+.+.|.++++
T Consensus 350 l~~~L~~~~~ 359 (462)
T PLN02187 350 VCDRLKDIPC 359 (462)
T ss_pred HHHHHhhCCC
Confidence 8888887644
No 66
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.94 E-value=9.1e-26 Score=217.96 Aligned_cols=274 Identities=15% Similarity=0.145 Sum_probs=209.7
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHH-HHHHHHHHcCCCCCCcEEEe---CCHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFT---KNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~v~~t---~g~t 139 (368)
.+.++|-.+. ..+++.+++++...+...+ ++|. +.+..+....+.+++ .|+.++++||++++ ++.++ +|++
T Consensus 34 ~~~l~l~~se-n~~s~~v~~~~~~~l~~~y~~g~p~-s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~-~~~~~~~~~sgt 110 (452)
T PTZ00094 34 IEGLELIASE-NFTSRAVLECLGSCFTNKYAEGLPG-NRYYGGNEVVDKIENLCQKRALEAFGLDPE-EWGVNVQPYSGS 110 (452)
T ss_pred HcCeeEeccc-ccCCHHHHHHhcchhhccccCCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCcc-cceeecCCCchH
Confidence 3456665544 4678889999999887765 6775 466666666677764 89999999999765 66666 7899
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHH------HcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEE
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ------KTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLV 212 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~------~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v 212 (368)
+++..++.++ +++||+|++.+.+|.++...+....+ ..+.++..++++.+|.+|+++|++++++ ++++|
T Consensus 111 ~an~~v~~al----~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~id~~~L~~~l~~~~~~lv 186 (452)
T PTZ00094 111 PANFAVYTAL----LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEKGLIDYDKLEELAKAFRPKLI 186 (452)
T ss_pred HHHHHHHHHh----cCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCCCCCcCHHHHHHHHHHhCCCEE
Confidence 9999999998 78999999999999887654432211 1123445566677799999999999964 67777
Q ss_pred EEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCC---CCccEEEecCcCcC-CCCcceEEEEcccccc
Q 017640 213 VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQG---LDADFLVASSHKMC-GPTGIGFLFGKSDLLS 288 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~ 288 (368)
++. ++.+|...|+++|.++|+++|+++++|++|++|.++.+... .++|++++|+||++ ||.| |++++++++++
T Consensus 187 i~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~ 263 (452)
T PTZ00094 187 IAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFPYADVVTTTTHKSLRGPRS-GLIFYRKKVKP 263 (452)
T ss_pred EEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCCCCcEEEcCCccCCCCCCc-eEEEEecccch
Confidence 764 34599999999999999999999999999999998665421 36999999999954 7887 88888877655
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+.+...... + ..+ .|+++...++++.++++++...+.+.+++++.++++++.+.|.+. |+
T Consensus 264 ~l~~~~~~~~-----------~----p~~-~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~ 324 (452)
T PTZ00094 264 DIENKINEAV-----------F----PGL-QGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GY 324 (452)
T ss_pred HHHHhhcccc-----------C----CCC-CCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-Cc
Confidence 4332211000 0 012 478999999999999999988788999999999999999999874 54
No 67
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2.7e-25 Score=211.74 Aligned_cols=260 Identities=15% Similarity=0.172 Sum_probs=187.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g~ 138 (368)
++++.|+.+.+. +.|+.+.+++.+.+..... .. +.......++|+++++++ |.+ +++.|++|+|+
T Consensus 35 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~----~~----Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~ 106 (394)
T PRK05942 35 LDLIDLGMGNPDGAAPQPVIEAAIAALADPQN----HG----YPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGS 106 (394)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCC----cc----CCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccCh
Confidence 567888887655 3456677776665542100 01 111222336777777766 543 33258899999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++||+|++++|+|+..... +...|++++.++++.+ +.+|++++++.+.+++++|++++
T Consensus 107 ~~al~~~~~~~----~~~gd~Vlv~~P~y~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~ 178 (394)
T PRK05942 107 KEGLTHLALAY----VNPGDVVLVPSPAYPAHFRG----PLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNY 178 (394)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcchHHH----HHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcC
Confidence 99999999988 89999999999999885433 3456999999998743 56899999999988999999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
|+||||.+++ +++|.++|++||+++|+|++|..... ++ ++.. .+..++++|+||.||.+| +||++++
T Consensus 179 P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~ 258 (394)
T PRK05942 179 PSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN 258 (394)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC
Confidence 9999999999 77899999999999999999873211 11 1221 235678899999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.++..... ...+.+.....++..+++...+ .++.++++.++..+++.+.|.+.
T Consensus 259 ~~l~~~l~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~ 316 (394)
T PRK05942 259 RHIIQGLRTLKTN---------------------LDYGIFSALQKAAETALQLPDS-YLQQVQERYRTRRDFLIQGLGEL 316 (394)
T ss_pred HHHHHHHHHHHhh---------------------cccCCCHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 9988877644321 0113344455566666664333 36677888888888888888764
No 68
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=1.2e-25 Score=211.01 Aligned_cols=248 Identities=18% Similarity=0.235 Sum_probs=191.8
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.+.+|+.+++++.++.+.+. ...+..+++++.+++++|.+ ++++|+|+|+|+.+++.++ ++
T Consensus 22 ~s~~~~~v~~a~~~~~~~~~------------~~~~~~~~~~~~~a~~~g~~---~~~~~~g~t~al~~al~al----~~ 82 (363)
T TIGR01437 22 VSTVSDEVADAQKRGAQNYF------------EIKELVNKTGEYIANLLGVE---DAVIVSSASAGIAQSVAAV----IT 82 (363)
T ss_pred CCCCCHHHHHHHHHHHhcCC------------CHHHHHHHHHHHHHHhhCCC---eEEEEcCHHHHHHHHHHHH----hc
Confidence 34689999999998865431 13577889999999999985 6799999999999999998 77
Q ss_pred CCC---------------EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEE-Eccccc
Q 017640 156 SGD---------------EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVV-IHHISN 219 (368)
Q Consensus 156 ~gd---------------~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~-~~~~~n 219 (368)
+|| +|+++.|.+.....++.......|+++++++. ++.+|+++++++++++|++++ +++++|
T Consensus 83 ~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~ai~~v~~~~~ 160 (363)
T TIGR01437 83 RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTAAILYIKSHHC 160 (363)
T ss_pred CCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhceEEEEEecCCC
Confidence 887 88888765443322345556677999999986 456899999999999998766 577889
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCcccCCc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGE 298 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~~g~~ 298 (368)
++|.+.|+++|.++|++||+++++|++|+.... .....+.|++++|+|| +.||. .|+++.++++++.+++...+.+
T Consensus 161 ~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~~--~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~~~ 237 (363)
T TIGR01437 161 VQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDLQ--KYYRLGADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKGIG 237 (363)
T ss_pred CcCCcCCHHHHHHHHHHcCCeEEEECCCCCchH--HHHHcCCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCCCc
Confidence 999999999999999999999999999983211 1123468999999999 55676 7999988888877655443321
Q ss_pred ceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..++.|+ ..++++.++++++.+.+.+.+.++.+. ++++.+.|.+++|++
T Consensus 238 ----------------~~~~~~~---~~~~gl~aAl~~~~~~~~~~~~~~~~~-~~~l~~~L~~i~g~~ 286 (363)
T TIGR01437 238 ----------------RAMKVGK---ENILGLTAALEQYLSTGKESGAEMVAK-LTPFIEALNTLKGVS 286 (363)
T ss_pred ----------------ceeccCH---HHHHHHHHHHHHHHccCcccHHHHHHH-HHHHHHHHhcCCCeE
Confidence 2334445 337888889999888777777766664 557999999888764
No 69
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.94 E-value=3.2e-25 Score=205.76 Aligned_cols=254 Identities=17% Similarity=0.227 Sum_probs=205.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++++.|+.+.+. ++|+.+.+++.+.+..++.+|+. ...++++++++++|..++++|++++|+++.+..
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~~~~~~~~~rYPd~-----------~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~ 90 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAIRAALDKLNRYPDP-----------DYRELRAALAEYYGVVDPENVLVGNGSDELIEL 90 (356)
T ss_pred ccceeecCCCCCCCCCHHHHHHHHHHHHhhccCCCC-----------cHHHHHHHHHHHhCCCCcceEEEcCChHHHHHH
Confidence 458999999988 66799999999988877777753 133899999999994333499999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
+.+++ +.+||.|++..|+|.. +...++..|++++.|+..+ +.+|++.+.+.+.+++++|++|+|+||||..
T Consensus 91 l~~~~----~~~gd~vl~~~Ptf~~----Y~~~a~~~g~~~~~v~~~~-~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~ 161 (356)
T COG0079 91 LVRAF----VEPGDTVLIPEPTFSM----YEIAAQLAGAEVVKVPLKE-FRLDLDAILAAIRDKTKLVFLCNPNNPTGTL 161 (356)
T ss_pred HHHHh----hcCCCEEEEcCCChHH----HHHHHHhcCCeEEEecccc-cccCHHHHHHhhhcCCCEEEEeCCCCCCCCC
Confidence 99999 8999999999995555 6777788899999999988 9999999999998899999999999999999
Q ss_pred cCHHHHHHHHHhc--CCEEEEecCCcCCcc--cccCC-CCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCC
Q 017640 225 LPIEEIVHWSHDV--GAKVLVDACQSVPHM--VVDVQ-GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 225 ~~l~~i~~l~~~~--g~~li~D~a~~~~~~--~~~~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~ 297 (368)
++.++|.++++.. +.+|++||||.--.. .+++- ....-+++-|+||.||.+| +||++.++++++.+......|
T Consensus 162 ~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~ 241 (356)
T COG0079 162 LPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPF 241 (356)
T ss_pred CCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCC
Confidence 9988888887754 789999999872221 11211 2233577889999999999 999999999999888665432
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
+.+.++..++.++++.-+ -++...+++.+.++++.+.|+++.
T Consensus 242 -----------------------~v~~~a~~aa~aal~~~~--~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 242 -----------------------NVSSPALAAAIAALRDAD--YLEESVERIREERERLYAALKALG 283 (356)
T ss_pred -----------------------CCCHHHHHHHHHHcccHH--HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 456666666666666442 367778888888999999988764
No 70
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=3.3e-25 Score=211.23 Aligned_cols=260 Identities=14% Similarity=0.131 Sum_probs=195.0
Q ss_pred CCCeEEeccCCC-C-CCcHHHHHHHHHHHHHh-hccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAY-NSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
+.++++|..+.+ + ..++.+++++.+.+..+ ..++. +.+.. +..+...++|+.+|+++|.+ ++++++|+++|
T Consensus 37 g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~-s~~~~--G~~~~~~~le~~ia~~~g~~---~~ii~~~~~~a 110 (393)
T TIGR01822 37 GREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSS-VRFIC--GTQDIHKELEAKIAAFLGTE---DTILYASCFDA 110 (393)
T ss_pred CceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCC-cCccc--CChHHHHHHHHHHHHHhCCC---cEEEECchHHH
Confidence 356788888875 4 45889999999988875 22222 22222 22566778999999999985 55666888999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIH 215 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~ 215 (368)
+..++.++ +++||+|++++++|++....+ +..+.+.+.++ .+|++++++++.+ ++++|+++
T Consensus 111 ~~~~~~~l----~~~gd~vi~~~~~~~s~~~~~----~~~~~~~~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~ 177 (393)
T TIGR01822 111 NGGLFETL----LGAEDAIISDALNHASIIDGV----RLCKAKRYRYA-----NNDMADLEAQLKEARAAGARHRLIATD 177 (393)
T ss_pred HHHHHHHh----CCCCCEEEEeccccHHHHHHH----HhcCCceEEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEe
Confidence 99999888 899999999999999865443 33465554443 2489999988864 78899999
Q ss_pred ccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc---------cCCCCCccEEEecCcCcCCCCcceEEEEcccc
Q 017640 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQGLDADFLVASSHKMCGPTGIGFLFGKSDL 286 (368)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~l 286 (368)
+++|+||.+.|+++|.++|++||+++++|++|+.|.... ++. .++|++++|+||++++..+||+++++++
T Consensus 178 ~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l~g~r~G~~~~~~~~ 256 (393)
T TIGR01822 178 GVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKALGGASGGFTTARKEV 256 (393)
T ss_pred CCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHhhCCCcEEEEeCHHH
Confidence 999999999999999999999999999999998765421 111 2589999999997765457999999988
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
++.+++.... ..+ .++.+...++++..+++.++ ..+.++++..++.+++.+.|.+. |+
T Consensus 257 ~~~l~~~~~~------------------~~~-~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~ 314 (393)
T TIGR01822 257 VELLRQRSRP------------------YLF-SNSLPPAVVGASIKVLEMLE--ASNELRDRLWANTRYFRERMEAA-GF 314 (393)
T ss_pred HHHHHHhCcc------------------cee-cCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 8776542110 011 24556666667777887764 36778899999999999999774 54
No 71
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.94 E-value=5.5e-26 Score=213.12 Aligned_cols=269 Identities=17% Similarity=0.193 Sum_probs=199.3
Q ss_pred CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CCHHHHHHHHHHHccCCC
Q 017640 75 ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLVAYSWGLSN 153 (368)
Q Consensus 75 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t-~g~t~a~~~~~~~~~~~~ 153 (368)
++...++.|++++.+.....- .....+..+.+.++++|+.++++++++++++|+|+ .|+|.+++.++.++
T Consensus 10 GP~~~~~~v~~a~~~~~~~~~-----~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l---- 80 (361)
T TIGR01366 10 GPSKVRLEQLQALTTTAASLF-----GTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGL---- 80 (361)
T ss_pred CCcCCCHHHHHHHHhcCcccc-----ccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhc----
Confidence 345678888888653311110 12244566789999999999999999755588886 66999999999987
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHc--CCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHH
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIV 231 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~--g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~ 231 (368)
+.+ +.+++...+|.+. +...++.. ..++..++.+++..++. .+.+++++|+++|..|.||.+.|+++|
T Consensus 81 ~~~-~~l~i~~G~~~~~---~~~~a~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~I- 150 (361)
T TIGR01366 81 IEK-KSLHLSFGEFSSK---FAKAVKLAPWLGEPIIVTADPGSAPEP-----QADPGVDVIAWAHNETSTGVAVPVRRP- 150 (361)
T ss_pred ccc-cccEEecCHHHHH---HHHHHHhhhccCCceEEecCCCCCCCC-----ccCCCCCEEEEcccCCccceecccccc-
Confidence 432 3445555555543 44444442 23677777665443332 356789999999999999999999988
Q ss_pred HHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCC-cceEEEEcccccccCCCcccCCcceeecccCCCCC
Q 017640 232 HWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTF 310 (368)
Q Consensus 232 ~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~ 310 (368)
+|++|+++++|+++++|+.++|+++ +|++++|.||++|++ |++++++++++++++++...++..... +.+...+
T Consensus 151 --~~~~g~~~iVDavqs~g~~~idv~~--~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~-~~d~~~~ 225 (361)
T TIGR01366 151 --EGSDDALVVIDATSGAGGLPVDIAE--TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPE-FLSLPTA 225 (361)
T ss_pred --cccCCCeEEEEcCccccCCCCCHHH--CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCch-hhhHHHH
Confidence 5889999999999999999999885 899999999988865 588889999999888877766543321 1111111
Q ss_pred -CCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 311 -ADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 311 -~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.........+|+++..++++..+++++.++ |++.+.++..++++++++++.+..+.+
T Consensus 226 ~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~ 284 (361)
T TIGR01366 226 VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYAT 284 (361)
T ss_pred HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 111122346799999999999999999998 699999999999999999999886543
No 72
>PRK07682 hypothetical protein; Validated
Probab=99.94 E-value=1.9e-25 Score=211.78 Aligned_cols=258 Identities=17% Similarity=0.170 Sum_probs=187.2
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHh-hccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAY-NSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g 137 (368)
++.+.|+.+.+. ..++.+.+++.+.+... ..++ . .....++|+++++++ |.. ++++|++|+|
T Consensus 20 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~------~----~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYT------A----NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVG 89 (378)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCC------C----CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCC
Confidence 357899988876 45667778877765431 1111 1 112335666666666 443 3347999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
+++|+.+++.++ +++||+|++.+|+|+. +...++..|.+++.++.+. ++.+|++++++++.+++++++++
T Consensus 90 ~~~al~~~~~~l----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~ 161 (378)
T PRK07682 90 ASQALDVAMRAI----INPGDEVLIVEPSFVS----YAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLC 161 (378)
T ss_pred hHHHHHHHHHHh----CCCCCEEEEeCCCchh----hHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEE
Confidence 999999999988 8999999999998886 4445566799999998763 47889999999998899999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
+|+||||.+++ +++|.++|++|++++|+|++|..... ++ .+.. .+..+++.|+||.||.+| +||++++
T Consensus 162 ~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~ 241 (378)
T PRK07682 162 SPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP 241 (378)
T ss_pred CCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcC
Confidence 99999999998 78999999999999999999883321 11 1111 246789999999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+..... +...+.+.....++..+++.... .++.++++.++.++++.+.|.+.
T Consensus 242 ~~~i~~l~~~~~---------------------~~~~~~~~~~q~a~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~ 299 (378)
T PRK07682 242 VYFSEAMLKIHQ---------------------YSMMCAPTMAQFAALEALRAGND-DVIRMRDSYRKRRNFFVTSFNEI 299 (378)
T ss_pred HHHHHHHHHHHH---------------------hhccCCCHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 998887764321 00113344444445455542212 25677777888888888888775
No 73
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.6e-25 Score=209.39 Aligned_cols=252 Identities=15% Similarity=0.168 Sum_probs=189.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++.+.|+.+.+. .+++.+.+++.+.+......|.. ...++|++++++++++++ +|++|+|+++++..
T Consensus 29 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~~p~~-----------g~~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~ 96 (359)
T PRK03158 29 EKIVKLASNENPYGPSPKVKEAIAAHLDELALYPDG-----------YAPELRTKVAKHLGVDEE-QLLFGAGLDEVIQM 96 (359)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCC-----------cHHHHHHHHHHHhCCCHH-HEEECCCHHHHHHH
Confidence 356888877665 46888999988877654322221 244799999999998764 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||.|++.+|+|+. +...+...|++++.++.+ ++.+|++.++++++++++++++++|+||||.+
T Consensus 97 ~~~~~----~~~gd~v~~~~p~y~~----~~~~~~~~g~~~~~~~~~-~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~ 167 (359)
T PRK03158 97 ISRAL----LNPGTNTVMAEPTFSQ----YRHNAIIEGAEVREVPLK-DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTY 167 (359)
T ss_pred HHHHH----hCCCCEEEEcCCCHHH----HHHHHHHcCCeEEEEecC-CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCC
Confidence 99988 7899999999997766 455566779999999987 67789999999998899999999999999999
Q ss_pred cCHHHHHHHHHh--cCCEEEEecCCcCCcc----c--cc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM----V--VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 225 ~~l~~i~~l~~~--~g~~li~D~a~~~~~~----~--~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
+|.++|.++++. +|+++|+|++|..... + +. .+..+..+++.|++|.||.+| +||+++++++++.+...
T Consensus 168 ~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~ 247 (359)
T PRK03158 168 VNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIA 247 (359)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHh
Confidence 999998888876 5999999999863221 1 11 122356789999999999888 79999999988776543
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
... ...+..+..++..+++... -.+.+++..++..+++.+.+.+.
T Consensus 248 ~~~-----------------------~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~l~~~ 292 (359)
T PRK03158 248 RPP-----------------------FNTTRIAQYAAIAALEDQA--FLKECVEKNAEGLEQYYAFCKEY 292 (359)
T ss_pred cCC-----------------------CCCCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHC
Confidence 210 1345555565655554211 13455555666667777777664
No 74
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.94 E-value=3.5e-25 Score=211.16 Aligned_cols=257 Identities=17% Similarity=0.183 Sum_probs=182.2
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC---CCCcEEEeC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS---DSGEIVFTK 136 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~---~~~~v~~t~ 136 (368)
|.+.+.|+.+.+. ++++.+.+++.+.+.....++.. ....++|+.+++++ |.+ ++++|++|+
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~Y~~~----------~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~ 97 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLDGLASYPTT----------AGLPALREAIAAWLERRYGLPALDPATQVLPVN 97 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhhhhcCCCCC----------CCCHHHHHHHHHHHHHHhCCCcCCccceEEECC
Confidence 4678999998877 56788888888776543222211 11225666666654 643 334899999
Q ss_pred CHHHHHHHHHHHccCCCCCC---CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceE
Q 017640 137 NATEAINLVAYSWGLSNLKS---GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKL 211 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~---gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~ 211 (368)
|+++++..++.++ +++ ||.|++++|.|+. +...++..|++++.||++++ +.+|++.+++.+.+++++
T Consensus 98 G~~~al~~~~~~l----~~~~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~ 169 (396)
T PRK09147 98 GSREALFAFAQTV----IDRDGPGPLVVCPNPFYQI----YEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQL 169 (396)
T ss_pred ChHHHHHHHHHHH----cCCCCCCCEEEEcCCCccc----hHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEE
Confidence 9999999999998 788 8999999998776 45556677999999998743 578999999888778999
Q ss_pred EEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----ccc-------C--CCCCccEEEecCcCcCCC
Q 017640 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VVD-------V--QGLDADFLVASSHKMCGP 274 (368)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~-------~--~~~~~d~~~~s~~K~~g~ 274 (368)
+++++|+||||.+++ +++|+++|++|+++||+|++|..-.. +.. . ...+..+++.|+||.||.
T Consensus 170 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 249 (396)
T PRK09147 170 LFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNV 249 (396)
T ss_pred EEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCC
Confidence 999999999999998 77888899999999999999874221 110 1 112456999999999998
Q ss_pred Cc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 275 TG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 275 ~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
+| +||+++++++++.+..... +...+.+...+.++..++.. ..-+...+++.++.
T Consensus 250 ~GlRiG~~~~~~~l~~~~~~~~~---------------------~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~ 306 (396)
T PRK09147 250 PGLRSGFVAGDAALLKKFLLYRT---------------------YHGCAMPPAVQAASIAAWND--EAHVRENRALYREK 306 (396)
T ss_pred ccceeeeecCCHHHHHHHHHHhh---------------------hcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHH
Confidence 88 9999999988876653221 01113344444444344321 11244555566666
Q ss_pred HHHHHHHHHh
Q 017640 353 IICSIIVIQE 362 (368)
Q Consensus 353 ~~~l~~~l~~ 362 (368)
.+.+.+.|.+
T Consensus 307 ~~~~~~~L~~ 316 (396)
T PRK09147 307 FDAVTPILAP 316 (396)
T ss_pred HHHHHHHHHH
Confidence 6666666655
No 75
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=2e-25 Score=209.58 Aligned_cols=253 Identities=14% Similarity=0.155 Sum_probs=188.2
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+++++|+.+..+ .+++.+.+++.+.+.....++. ....++|+.++++++++++ +|++|+|+++++..
T Consensus 22 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~-----------~g~~~lr~~ia~~~~~~~~-~I~~~~G~~~~l~~ 89 (352)
T PRK03321 22 PGAIKLSSNETPFGPLPSVRAAIARAAAGVNRYPD-----------MGAVELRAALAEHLGVPPE-HVAVGCGSVALCQQ 89 (352)
T ss_pred ccceeccCCCCCCCCCHHHHHHHHHHHHhcCcCCC-----------CcHHHHHHHHHHHhCcCHH-HEEECCCHHHHHHH
Confidence 357899998777 4778999999887765433332 1245899999999998764 89999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||+|+++.|.|.. +...++..|++++.++.++++.+|++.+++++++++++|++++++||||.+
T Consensus 90 ~~~~~----~~~gd~Vli~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~ 161 (352)
T PRK03321 90 LVQAT----AGPGDEVIFAWRSFEA----YPILVQVAGATPVQVPLTPDHTHDLDAMAAAITDRTRLIFVCNPNNPTGTV 161 (352)
T ss_pred HHHHh----cCCCCEEEeCCCCHHH----HHHHHHHcCCEEEEccCCCCCCCCHHHHHHhhccCCCEEEEeCCCCCcCCC
Confidence 99887 8999999999996644 445567789999999998778889999999998899999999999999999
Q ss_pred cCHHHHHHHHHh--cCCEEEEecCCcCCcc------ccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM------VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 225 ~~l~~i~~l~~~--~g~~li~D~a~~~~~~------~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
+|.++|.++|++ +++++|+|++|..... .+. ....+..++++|+||.||.+| +||+++++++++.+...
T Consensus 162 ~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~ 241 (352)
T PRK03321 162 VTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKV 241 (352)
T ss_pred cCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHh
Confidence 999999999987 5899999999862111 111 112245688889999999888 99999999888876643
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.. ..+.+..+..++..+++..... .+.+ ++..+..+.+.+.|.+.
T Consensus 242 ~~-----------------------~~~~s~~~q~~a~~~l~~~~~~-~~~~-~~~~~~r~~~~~~L~~~ 286 (352)
T PRK03321 242 AV-----------------------PFSVNSLAQAAAIASLAAEDEL-LERV-DAVVAERDRVRAALRAA 286 (352)
T ss_pred cC-----------------------CCCCCHHHHHHHHHHhcCHHHH-HHHH-HHHHHHHHHHHHHHHHC
Confidence 21 1245556665555555432221 2222 23333445566666653
No 76
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.94 E-value=2.1e-25 Score=212.11 Aligned_cols=260 Identities=15% Similarity=0.082 Sum_probs=182.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~v~~t~g~ 138 (368)
.+++.|+.+... ++++.+.+++.+.+..... ..+ .......++|+++++++ |. +++++|++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~Y----~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs 101 (388)
T PRK07366 30 KELIDLSLGSSDLPAPAHALEAIAQSLHDPST----HGY----LLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGS 101 (388)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCccc----CCC----CCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCc
Confidence 567899888877 5578888888876642100 001 11122336777777776 43 332269999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++.+++.++ +++||+|++.+|+|+.. ...++..|++++.++++++ +.+|++++++.+.++++++++++
T Consensus 102 ~~al~~~~~~l----~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~ 173 (388)
T PRK07366 102 QEGTAHLPLAV----LNPGDFALLLDPGYPSH----AGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSY 173 (388)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcch----HHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeC
Confidence 99999999988 89999999999988874 4455667999999999743 56788999888877899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------c-cc-cCCCC-CccEEEecCcCcCCCCc--ceEEEE
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------M-VV-DVQGL-DADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~-~~-~~~~~-~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
++||||.+++ +++|+++|++||++||+|++|..-. . .+ ++... ...++++|+||.||.+| +||++.
T Consensus 174 p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~ 253 (388)
T PRK07366 174 PHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG 253 (388)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC
Confidence 9999999999 5678889999999999999987221 1 11 12211 24578899999999888 999999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+....... ..++.+.... ++..++....+ -+++++++.++..+++.+.|++
T Consensus 254 ~~~li~~l~~~~~~~--------------------~~~~~~~~~~-~a~~~l~~~~~-~l~~~~~~~~~~r~~l~~~L~~ 311 (388)
T PRK07366 254 NAQLIQALRQVKAVV--------------------DFNQYRGILN-GAIAALTGPQA-TVQQTVQIFRQRRDAFINALHQ 311 (388)
T ss_pred CHHHHHHHHHHHhhc--------------------ccCCCHHHHH-HHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 999988776443211 1112222222 22233321111 2566777777778888888776
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 312 ~ 312 (388)
T PRK07366 312 I 312 (388)
T ss_pred C
Confidence 4
No 77
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=1e-24 Score=211.72 Aligned_cols=283 Identities=15% Similarity=0.087 Sum_probs=204.2
Q ss_pred EEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH--
Q 017640 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV-- 145 (368)
Q Consensus 69 i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~-- 145 (368)
.+++.+... ..++.+.+++.+.-...+-.|+ .....+.+..+.+.++++.+++++|.+.. .+..++|+++.+..+
T Consensus 71 ~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpY-q~e~~sqG~lel~~~~~~~la~l~G~~~~-~l~~~~GA~a~~~~l~~ 148 (481)
T PRK04366 71 GFYPLGSCTMKYNPKINEKVARLPGFAELHPL-QPEETVQGALELMYELQEWLKEITGMDAV-TLQPAAGAHGELTGLLM 148 (481)
T ss_pred ceecCcccCCCCCHHHHHHHHhCcchhcCCCC-CChhhhhHHHHHHHHHHHHHHHHhCCCce-EEEeCcHHHHHHHHHHH
Confidence 466667555 7788888888765222222232 22234566788999999999999999732 333344444433322
Q ss_pred HHHccCCCCCCCC----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 146 AYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 146 ~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
++.+ ..++|| +|++++++|+++... ++..|++++.+++++++.+|+++|++++++++++|++++++ +|
T Consensus 149 ~r~~---~~~~Gd~~~~~Vlv~~~~hp~~~~~----~~~~G~~vv~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~t 220 (481)
T PRK04366 149 IRAY---HEARGDTKRTEVIVPDSAHGTNPAS----AAMAGFKVVEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TL 220 (481)
T ss_pred HHHH---hhccCcCCCCEEEEcCCccHhHHHH----HHHcCCEEEEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-Cc
Confidence 2222 245565 999999999886543 46679999999998889999999999999999999999987 99
Q ss_pred ccc-cCHHHHHHHHHhcCCEEEEecCCcCCcc-cccCCCCCccEEEecCcCcCC------CCcceEEEEcccccccCCCc
Q 017640 222 ASI-LPIEEIVHWSHDVGAKVLVDACQSVPHM-VVDVQGLDADFLVASSHKMCG------PTGIGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 222 G~~-~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~~~~~~~~d~~~~s~~K~~g------~~G~G~l~~~~~li~~l~~~ 293 (368)
|.+ .|+++|+++|+++|+++++|+++..+.. .++...+++|++++|+||+|| ++|+|++++++++.+.+.+.
T Consensus 221 G~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~ 300 (481)
T PRK04366 221 GLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVP 300 (481)
T ss_pred cccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCC
Confidence 987 4799999999999999999999986533 235667799999999999653 45588999999999888766
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..|.... ....... ....-+|+..+|.+...+.++...+..+...|++.+.++...+++++.+.|.++
T Consensus 301 ~v~~~g~-~~~l~~~-r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 301 VVEKDGD-RYRLDYD-RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred eeeccCC-ceeeccc-ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 5542111 1111111 112235677777777666666666666666678888899999999999999876
No 78
>PRK08068 transaminase; Reviewed
Probab=99.94 E-value=4.8e-25 Score=209.72 Aligned_cols=260 Identities=15% Similarity=0.138 Sum_probs=183.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CC--CCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA--SDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~--~~~~~v~~t~g~ 138 (368)
++.+.|+.+.++ +.++.+.+++.+.+...... .+ .......++|+++++++ |. +++++|++|+|+
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~----~Y----~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~ 103 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANH----KY----SPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGG 103 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCC----CC----CCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCc
Confidence 567899988766 45677888887776531100 01 00122336777777776 53 332279999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++||.|++++|+|+.. ...++..|++++.+++++ ++.+|++++++.+.+++++|++++
T Consensus 104 ~~~l~~~~~~~----~~~gd~vlv~~P~y~~~----~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~ 175 (389)
T PRK08068 104 KAGLVELPQCL----MNPGDTILVPDPGYPDY----LSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNY 175 (389)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcch----HHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEEC
Confidence 99999999988 89999999999988874 444566799999999974 367899999999988899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcC----Cccccc---CC-CCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHMVVD---VQ-GLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~~~~~~---~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
|+||||.+++ +++|.++|++|++++|+|++|.. +..+.. .. ..+..+++.|+||.||.+| +||++.+
T Consensus 176 P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~ 255 (389)
T PRK08068 176 PNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGN 255 (389)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEecC
Confidence 9999999999 56888899999999999999862 111111 11 1235688999999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+...... +..++++..+.+ +..++..-. .-++.++++.++..+++.+.|.+.
T Consensus 256 ~~l~~~l~~~~~~--------------------~~~~~~~~~q~~-~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~ 313 (389)
T PRK08068 256 ESVIEAINLLQDH--------------------LFVSLFGAIQDA-AIEALLSDQ-SCVAELVARYESRRNAFISACREI 313 (389)
T ss_pred HHHHHHHHHHHhh--------------------ccCCCChHHHHH-HHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9988876543321 111233333332 233332111 124666777778888888888765
No 79
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=4.2e-25 Score=209.61 Aligned_cols=262 Identities=14% Similarity=0.153 Sum_probs=189.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~t~g~t~a~ 142 (368)
+++++|+.+... ++++.+.+++.+.+... . ..|....+..++.+.+++.+++++|.+ ++++|++|+|+++++
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~----~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al 103 (384)
T PRK12414 29 HDALNLSQGAPNFAPDPALVEGVARAMRDG----H-NQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGL 103 (384)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHHhC----C-CCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHH
Confidence 467899988877 55888888888766531 0 111111223556667777777778875 224799999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
..++.++ +.+||+|++.+|+|... ...++..|++++.+++++ ++.+|++.|++++++++++|++++++|||
T Consensus 104 ~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPT 175 (384)
T PRK12414 104 YAAISAL----VHPGDEVIYFEPSFDSY----APIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPS 175 (384)
T ss_pred HHHHHHh----cCCCCEEEEeCCCccch----HHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCC
Confidence 9999988 89999999999998763 344555699999999874 56789999999998889999999999999
Q ss_pred ccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEEcccccc
Q 017640 222 ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (368)
Q Consensus 222 G~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~ 288 (368)
|.+++ +++|+++|++||+++|+|++|..-.. ++ .... .+..+++.|+||.||.+| +||+++++++++
T Consensus 176 G~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~ 255 (384)
T PRK12414 176 ATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMD 255 (384)
T ss_pred CcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHHHHH
Confidence 99987 77888899999999999999873211 11 1111 235689999999999888 899999999887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+...... .....+.....++...++.-. ....+++..++..+.+.+.|.+.
T Consensus 256 ~l~~~~~~---------------------~~~~~s~~~q~a~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~ 307 (384)
T PRK12414 256 EIRKVHQF---------------------MVFSADTPMQHAFAEALAEPA--SYLGLGAFYQRKRDLLARELAGS 307 (384)
T ss_pred HHHHHHhh---------------------eecCCCcHHHHHHHHHhcCCh--HHHHHHHHHHHHHHHHHHHHHhC
Confidence 76543210 011334444544544443111 12345666677777788887764
No 80
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.94 E-value=4.7e-25 Score=206.83 Aligned_cols=255 Identities=16% Similarity=0.141 Sum_probs=179.0
Q ss_pred eEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCHHH
Q 017640 68 LVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNATE 140 (368)
Q Consensus 68 ~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g~t~ 140 (368)
++.|+.+... +.++.+.+++.+.......++. .....++|+++++++ |.+ ++++|++|+|+++
T Consensus 2 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~Y~~----------~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ 71 (350)
T TIGR03537 2 LFDFGTGDPKEPTPPFIRKALIDAVPEVSQYPS----------ALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKE 71 (350)
T ss_pred eEeccCCCCCCCCCHHHHHHHHHHHhccCCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 3456666555 4477888888876543222221 111225666666665 643 3238999999999
Q ss_pred HHHHHHHHccCCCCCCC---CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEc
Q 017640 141 AINLVAYSWGLSNLKSG---DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~g---d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
++..++.++ +++| |+|++++|+|+.. ...++..|++++.+++++ ++.+|++++++++.+++++++++
T Consensus 72 ai~~~~~~~----~~~g~~~d~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~ 143 (350)
T TIGR03537 72 AIFHFPLVF----IDPEEDRRRVIFGTPGYPVY----ERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWIN 143 (350)
T ss_pred HHHHHHHHH----cCCCCCCceEEEcCCCCcch----HHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEe
Confidence 999999988 6766 6999999988874 444566799999999863 35689999999998899999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc---ccccCC--CCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH---MVVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~---~~~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
+++||||.++| +++|.++|++||+++|+|++|+... .+.+.. ..+..+++.|+||.+|.+| +||++.+++
T Consensus 144 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~ 223 (350)
T TIGR03537 144 YPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEK 223 (350)
T ss_pred CCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCcCCEEEEeecccccCCccccceeeecCHH
Confidence 99999999999 8899999999999999999987321 111111 1235688889999999888 999999888
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.++..... +.. +.+.....++..++.. ....+.++++.++..+.+.+.|.+.
T Consensus 224 ~~~~~~~~~~~--------------------~~~-~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 224 LISFLRKLRAN--------------------FGV-ASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV 278 (350)
T ss_pred HHHHHHHHHHh--------------------hcc-CCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88776644321 111 2222333333344431 1124566677777777787777764
No 81
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=5.6e-25 Score=208.83 Aligned_cols=259 Identities=16% Similarity=0.148 Sum_probs=182.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH-hhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t~g 137 (368)
++.+.|+.+.+. ++++.+.++..+.... ...++. .....++|+++++++ | .++ ++|++|+|
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~----------~~G~~~lr~~ia~~~~~~~~~~~~~-~~i~it~G 97 (384)
T PRK06348 29 PDIIDLSLGDPDLITDESIINAAFEDAKKGHTRYTD----------SGGDVELIEEIIKYYSKNYDLSFKR-NEIMATVG 97 (384)
T ss_pred CCcEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCC----------CCCcHHHHHHHHHHHHHHhCCCCCh-hhEEEcCC
Confidence 356778877766 4456666655444322 111111 112235677777666 3 334 59999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcccCceEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
+++++..++.++ +++||+|++.+|.|+.. ...++..|++++.++.. .++.+|+++|++.+.+++++|+++
T Consensus 98 ~~~al~~~~~~~----~~~gd~vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 169 (384)
T PRK06348 98 ACHGMYLALQSI----LDPGDEVIIHEPYFTPY----KDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILN 169 (384)
T ss_pred hHHHHHHHHHHh----cCCCCEEEEeCCCCcch----HHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEe
Confidence 999999999998 89999999999988874 44455669999999874 346689999999998889999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
+++||||.+++ +++|.++|++||++||+|++|..-.. ++ .+.. .+..+++.|+||.+|.+| +||++++
T Consensus 170 ~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~ 249 (384)
T PRK06348 170 SPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAP 249 (384)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeeecC
Confidence 99999999999 67888889999999999999883211 11 1221 246789999999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+....... ..+.+.....++..+++..++. .+.+++..++..+++.+.|.++
T Consensus 250 ~~~~~~~~~~~~~~---------------------~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~r~~~~~~~L~~~ 307 (384)
T PRK06348 250 DYIIETAKIINEGI---------------------CFSAPTISQRAAIYALKHRDTI-VPLIKEEFQKRLEYAYKRIESI 307 (384)
T ss_pred HHHHHHHHHHHHhc---------------------cCCCCHHHHHHHHHHHhCcHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 98877665333110 1134555555565565533222 4566667777778888888776
Q ss_pred cC
Q 017640 364 HN 365 (368)
Q Consensus 364 ~g 365 (368)
++
T Consensus 308 ~~ 309 (384)
T PRK06348 308 PN 309 (384)
T ss_pred CC
Confidence 54
No 82
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=8.4e-25 Score=209.21 Aligned_cols=261 Identities=17% Similarity=0.161 Sum_probs=196.8
Q ss_pred CCCeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+..+++++...+- ...|.+++++.+++..+..+++.+..... ..+...++++.+++++|.+ .+++++|+++|+
T Consensus 53 g~~~~~~~~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~--~~~~~~~le~~la~~~g~~---~~~~~~sG~~An 127 (407)
T PRK07179 53 GPDAIILQSNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLH--DDSPKPQFEKKLAAFTGFE---SCLLCQSGWAAN 127 (407)
T ss_pred CCcEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccC--CchHHHHHHHHHHHHhCCC---cEEEECCHHHHH
Confidence 3556666665443 45789999999999887555532211111 1235667889999999985 568899999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNML 221 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t 221 (368)
..++.++ ..+||.|++...+|.+.... ++..|++++.++.. |+++|++++++ ++++|++++++|||
T Consensus 128 ~~~l~~l----~~~g~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~lV~v~~v~n~t 194 (407)
T PRK07179 128 VGLLQTI----ADPNTPVYIDFFAHMSLWEG----VRAAGAQAHPFRHN-----DVDHLRRQIERHGPGIIVVDSVYSTT 194 (407)
T ss_pred HHHHHHh----CCCCCEEEEECCcCHHHHHH----HHHCCCeEEEecCC-----CHHHHHHHHHhcCCeEEEECCCCCCC
Confidence 9999998 77899999999999886543 34458777766543 89999999976 57899999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCC
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~ 292 (368)
|.+.|+++|.++|++||+++|+|++|+.|... +++. .++|++++|+||.+|+. +|++++++++++.+..
T Consensus 195 G~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~-~~vdi~~~S~sK~~g~~-~G~l~~~~~~~~~~~~ 272 (407)
T PRK07179 195 GTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLT-SRVHFITASLAKAFAGR-AGIITCPRELAEYVPF 272 (407)
T ss_pred CccccHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCC-CCCCEEEeechHhhhcc-CeEEEeCHHHHHHHHH
Confidence 99999999999999999999999999976531 1111 24699999999988865 7999999887665542
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.... .. ..+|.+...++++.++++.+.. .+..+++..++.+++.+.|.++ |++
T Consensus 273 ~~~~------------------~~-~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~-g~~ 325 (407)
T PRK07179 273 VSYP------------------AI-FSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSEL-GYN 325 (407)
T ss_pred hCcC------------------ee-eCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 2100 01 1347777777778888887755 3567889999999999999876 554
No 83
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=3.7e-25 Score=210.79 Aligned_cols=258 Identities=17% Similarity=0.243 Sum_probs=184.7
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CC----CCCCcEEEe
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NA----SDSGEIVFT 135 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~----~~~~~v~~t 135 (368)
+.+.+.|+.+.+. .+|+.+.+++.+.+.....++.. ....++|+++++++ |. +++++|++|
T Consensus 27 ~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~----------~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it 96 (393)
T TIGR03538 27 SKPPIALSIGEPKHPTPAFVLEALRENLHGLSTYPTT----------KGLPELRQAIARWLERRFDLPTGVDPERHVLPV 96 (393)
T ss_pred CCCeEEecCCCCCCCCCHHHHHHHHHHhhccCCCCCC----------CCCHHHHHHHHHHHHHhhCCcccCCCCceEEEC
Confidence 3678899998877 57888899988876543222221 11236777777776 43 333479999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCE--EEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDE--VILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKL 211 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~--vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~ 211 (368)
+|+++++..++.++ +++||. |++++|.|+. +...++..|++++.++++++ +.+|++++++++.+++++
T Consensus 97 ~Ga~~al~~~~~~l----~~~gd~~~vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~ 168 (393)
T TIGR03538 97 NGTREALFAFAQAV----INPGQAPLVVMPNPFYQI----YEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQL 168 (393)
T ss_pred CCcHHHHHHHHHHH----cCCCCcceEEecCCCCcc----hHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceE
Confidence 99999999999988 889986 9999998876 44456677999999998643 578999999988888999
Q ss_pred EEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----ccc-------C--CCCCccEEEecCcCcCCC
Q 017640 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VVD-------V--QGLDADFLVASSHKMCGP 274 (368)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~-------~--~~~~~d~~~~s~~K~~g~ 274 (368)
|++++++||||.+++ +++|+++|++||++||+|++|..-.. +.. . ...+..+++.|+||.|+.
T Consensus 169 i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~ 248 (393)
T TIGR03538 169 LFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNL 248 (393)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCC
Confidence 999999999999999 78889999999999999999873211 101 1 112346899999999888
Q ss_pred Cc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 275 TG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 275 ~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
+| +||++.++++++.+..... ....+.+...+.++..++.. ..-++..+++.++.
T Consensus 249 ~GlRvG~~i~~~~l~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~ 305 (393)
T TIGR03538 249 PGLRSGFVAGDAEILKAFLRYRT---------------------YHGCAMPIPTQLASIAAWND--EQHVRENRALYREK 305 (393)
T ss_pred cccceEEEecCHHHHHHHHHHHH---------------------hhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHH
Confidence 88 9999999988876653321 00113344444444444421 11255666667777
Q ss_pred HHHHHHHHHhh
Q 017640 353 IICSIIVIQER 363 (368)
Q Consensus 353 ~~~l~~~l~~~ 363 (368)
.+.+.+.|.+.
T Consensus 306 ~~~~~~~L~~~ 316 (393)
T TIGR03538 306 FAAVLEILGQV 316 (393)
T ss_pred HHHHHHHHHhh
Confidence 77777777654
No 84
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.94 E-value=9.6e-25 Score=206.62 Aligned_cols=261 Identities=19% Similarity=0.152 Sum_probs=194.8
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCC--CCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS--NLKS 156 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~--~~~~ 156 (368)
+.+.+.+++..+......++. .+ ....+..+++++.+++++|++++ ++++++|+++++..++.++... .-++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~la~~~g~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPG--LF---PGTKKIEEEVVGSLGNLLHLPDA-YGYIVSGGTEANIQAVRAAKNLAREEKR 105 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcc--cC---ccHHHHHHHHHHHHHHHhCCCCC-CeEEeccHHHHHHHHHHHHHHHHhccCC
Confidence 444457777666554333332 11 23456678899999999999765 7888999999998887665110 0146
Q ss_pred CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD 236 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~ 236 (368)
||+|++++++|++ +...++..|++++.++.++++.+|++++++++++++..+++.+++|+||.+.|+++|.++|++
T Consensus 106 g~~vl~~~~~h~~----~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~ 181 (373)
T TIGR03812 106 TPNIIVPESAHFS----FEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALE 181 (373)
T ss_pred CcEEEECCcchHH----HHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHH
Confidence 7899999998877 555677789999999998889999999999998877544444478999999999999999999
Q ss_pred cCCEEEEecCCcCCcc----------cccCCCCCccEEEecCcCc-CCCCcce-EEEEcccccccCCCcccCCcceeecc
Q 017640 237 VGAKVLVDACQSVPHM----------VVDVQGLDADFLVASSHKM-CGPTGIG-FLFGKSDLLSAMPPFLGGGEMISDVF 304 (368)
Q Consensus 237 ~g~~li~D~a~~~~~~----------~~~~~~~~~d~~~~s~~K~-~g~~G~G-~l~~~~~li~~l~~~~~g~~~~~~~~ 304 (368)
+|+++++|++|+.+.. .+++...+.|++++|.||+ ++|.++| +++.++++++.++... .+..
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~~-~~~~----- 255 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVDA-PYLT----- 255 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcccC-cccC-----
Confidence 9999999999985543 2333334789999999995 4555555 4456777776653110 0000
Q ss_pred cCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 305 LDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 305 ~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...++ ..||++...++++..+++++.+.|++.+.++..++++++++.|+++
T Consensus 256 --------~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 307 (373)
T TIGR03812 256 --------VKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI 307 (373)
T ss_pred --------CCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 00112 2578999999999999999888899999999999999999999886
No 85
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.94 E-value=7.8e-26 Score=211.80 Aligned_cols=219 Identities=17% Similarity=0.111 Sum_probs=178.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHHHHHHHccCCCCC--------C--CCEEEEcCCCCccc
Q 017640 102 IHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAINLVAYSWGLSNLK--------S--GDEVILTVAEHHSA 170 (368)
Q Consensus 102 ~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~~~--------~--gd~vl~~~~~~~s~ 170 (368)
.+..+....+..+++++++++++|.+ .+.+++||+|+|+++..++.++...... + +++|++++++|++.
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~ 108 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSV 108 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHH
Confidence 34445566788888999999999997 4448999999999999999886321111 2 34788889988884
Q ss_pred HHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 171 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 171 ~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
. ..++..|.+++.++.++++.+|+++|++++.+ ++++|++++++|+||.+.|+++|.++|++||+++++|
T Consensus 109 ~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD 184 (345)
T cd06450 109 E----KAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVD 184 (345)
T ss_pred H----HHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEe
Confidence 4 34455589999999988889999999999987 7889999999999999999999999999999999999
Q ss_pred cCCcCCcccccCCC------CCccEEEecCcCc-CCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCC
Q 017640 245 ACQSVPHMVVDVQG------LDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF 317 (368)
Q Consensus 245 ~a~~~~~~~~~~~~------~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 317 (368)
++|+.+..+.+... .++|++++|+||+ ++|.|+|+++++
T Consensus 185 ~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~---------------------------------- 230 (345)
T cd06450 185 AAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR---------------------------------- 230 (345)
T ss_pred chhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------------------
Confidence 99998776443211 2689999999995 467789988766
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 318 EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 318 ~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+++..+++++...|++.+.++..++++++.+.|.++++++
T Consensus 231 ---------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 271 (345)
T cd06450 231 ---------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFE 271 (345)
T ss_pred ---------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 35567778888888899999999999999999999887753
No 86
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.94 E-value=5.1e-25 Score=216.37 Aligned_cols=200 Identities=18% Similarity=0.261 Sum_probs=157.3
Q ss_pred CCCeEEeccCCCC----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEE
Q 017640 65 SKKLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVF 134 (368)
Q Consensus 65 ~~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~ 134 (368)
|.+++.|+.+... +.|+.+.+++.+.+.....++. .....++|+++++++ +.++ ++|++
T Consensus 145 g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~~~~Y~~----------~~G~~~lReaia~~~~~~~~~~~~~-~~I~i 213 (517)
T PRK13355 145 GTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTDTEGYSD----------SKGLFSARKAIMQYAQLKGLPNVDV-DDIYT 213 (517)
T ss_pred CCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhcCCCCCC----------CcChHHHHHHHHHHHHhcCCCCCCh-hHEEE
Confidence 4678999997763 4588888988877654322221 233447888888888 4554 49999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEE
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (368)
|+|+++++.+++.++ +++||+|++++|.|+. +...++..|++++.+++++ ++.+|++++++++++++++|
T Consensus 214 t~G~~eal~~~~~~l----~~~Gd~Vli~~P~y~~----y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i 285 (517)
T PRK13355 214 GNGVSELINLSMSAL----LDDGDEVLIPSPDYPL----WTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAI 285 (517)
T ss_pred eCcHHHHHHHHHHHh----CCCCCEEEEcCCCCcC----HHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEE
Confidence 999999999999988 8999999999998887 4455667799999999874 37899999999999999999
Q ss_pred EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++|+||||.+++ +++|+++|++||++||+|++|.--. .++ .+......+++.|+||.|+.+| +||+
T Consensus 286 ~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~ 365 (517)
T PRK13355 286 VIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWM 365 (517)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEE
Confidence 99999999999999 7889999999999999999987211 111 1111112355689999999888 9999
Q ss_pred EEc
Q 017640 281 FGK 283 (368)
Q Consensus 281 ~~~ 283 (368)
+++
T Consensus 366 i~~ 368 (517)
T PRK13355 366 ILS 368 (517)
T ss_pred Eee
Confidence 864
No 87
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.3e-25 Score=213.79 Aligned_cols=263 Identities=19% Similarity=0.191 Sum_probs=189.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t 139 (368)
++++.|+.+... ++++.+.+++.+.+..... .+.. .....++|+++++++ |.. .+++|++|+|++
T Consensus 33 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Y~~----~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 103 (391)
T PRK08361 33 ENVISLGIGEPDFDTPKNIKEAAKRALDEGWT-----HYTP----NAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAY 103 (391)
T ss_pred cCeEEcCCCCCCCCCCHHHHHHHHHHHhcCCC-----CCCC----CCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChH
Confidence 457888888877 4577888888776653100 0100 122336777777776 432 234999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++.+++.++ +++||.|++.+|+|.+.. ..++..|++++.++++++ +.+|++++++.+++++++++++++
T Consensus 104 ~al~~~~~~l----~~~g~~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p 175 (391)
T PRK08361 104 EATYLAFESL----LEEGDEVIIPDPAFVCYV----EDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYP 175 (391)
T ss_pred HHHHHHHHHh----cCCCCEEEEcCCCCcccH----HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCC
Confidence 9999999988 889999999999988843 445567999999998753 578999999999989999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccCC--CCCccEEEecCcCcCCCCc--ceEEEEcccc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
+||||.++| +++|.++|+++++++|+|++|+.... ...+. ..+.++++.|+||.||.+| +||+++++++
T Consensus 176 ~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~ 255 (391)
T PRK08361 176 NNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQV 255 (391)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHH
Confidence 999999999 88999999999999999999873221 11111 1246789999999999888 9999999988
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~-~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
++.+..... +..++.+.....++..+++.-.. ..++.++++.++..+.+.+.|.+.+|
T Consensus 256 ~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~ 314 (391)
T PRK08361 256 IKDMIKLHA---------------------YIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPH 314 (391)
T ss_pred HHHHHHHHh---------------------hhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 876543211 01113333334444444432111 12567788888888888999887655
Q ss_pred C
Q 017640 366 T 366 (368)
Q Consensus 366 ~ 366 (368)
+
T Consensus 315 ~ 315 (391)
T PRK08361 315 I 315 (391)
T ss_pred C
Confidence 4
No 88
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.1e-25 Score=211.46 Aligned_cols=262 Identities=16% Similarity=0.173 Sum_probs=190.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t~g~ 138 (368)
++.+.|..+... ++++.+.+++.+.+..... .+. .......+|+.+++++ | ..+ ++|++|+|+
T Consensus 31 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i~~~~g~ 100 (393)
T PRK05764 31 RDVISLGAGEPDFDTPEHIKEAAIEALDDGKT-----KYT----PAAGIPELREAIAAKLKRDNGLDYDP-SQVIVTTGA 100 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCC-----CcC----CCCChHHHHHHHHHHHHHHhCCCCCH-HHEEEeCCc
Confidence 567888888877 4577888888777653110 011 1122346777777776 3 333 489999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++||.|++++|+|.. +...++..|++++.++.++ ++.+|++.+++++++++++|++++
T Consensus 101 ~~a~~~~~~~~----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 172 (393)
T PRK05764 101 KQALYNAFMAL----LDPGDEVIIPAPYWVS----YPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNS 172 (393)
T ss_pred HHHHHHHHHHh----cCCCCEEEecCCCCcc----hHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEEC
Confidence 99999999988 8899999999998887 4445566799999999874 367899999999988899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-c--CCCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-D--VQGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~--~~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
++||||.++| +++|.++|++||+++++|++|+.... ++ . .+..+.+++++|++|.+|.+| +||++.
T Consensus 173 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~ 252 (393)
T PRK05764 173 PSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG 252 (393)
T ss_pred CCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec
Confidence 9999999998 77899999999999999999873221 11 1 122357899999999999888 899999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+...... .....+.....++...++.. ...++.++++..+..+++.+.|++
T Consensus 253 ~~~~~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 310 (393)
T PRK05764 253 PKELIKAMSKLQSH---------------------STSNPTSIAQYAAVAALNGP-QDEVEEMRQAFEERRDLMVDGLNE 310 (393)
T ss_pred CHHHHHHHHHHHhh---------------------cccCCChHHHHHHHHHHcCC-hHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99888776543311 01133444444454555411 122456677777888888888887
Q ss_pred hcCCC
Q 017640 363 RHNTT 367 (368)
Q Consensus 363 ~~g~t 367 (368)
++|++
T Consensus 311 ~~g~~ 315 (393)
T PRK05764 311 IPGLE 315 (393)
T ss_pred CCCCc
Confidence 75653
No 89
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=7.5e-25 Score=208.36 Aligned_cols=260 Identities=14% Similarity=0.090 Sum_probs=184.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t 139 (368)
+++++|+.+... ++++.+.+++.+.+... . ..+. ......++|+++++++ |.. ++++|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~---~--~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~ 100 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRG---V--TQYT----SALGLAPLREAIAAWYARRFGLDVAPERIVVTAGAS 100 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcC---C--CCCC----CCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcH
Confidence 678999999877 46788888888776531 0 0111 0122346777777776 432 234899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+|+.+++.++ +++||+|++++|+|++... .++..|++++.++.++ ++.+|++++++.+.+++++|+++++
T Consensus 101 ~al~~~~~~l----~~~gd~Vlv~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 172 (388)
T PRK07337 101 AALLLACLAL----VERGDEVLMPDPSYPCNRH----FVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASP 172 (388)
T ss_pred HHHHHHHHHh----cCCCCEEEEeCCCchhhHH----HHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECC
Confidence 9999999988 8999999999999988543 3455699999999874 3688999999999989999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccCCCCC-ccEEEecCcCcCCCCc--ceEEEEcccccc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQGLD-ADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~~~~-~d~~~~s~~K~~g~~G--~G~l~~~~~li~ 288 (368)
+||||.+++ +++|+++|++||+++|+|++|..-.. +......+ ..+++.|+||.||.+| +||+++++++++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~ 252 (388)
T PRK07337 173 SNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSALSLGDDVITINSFSKYFNMTGWRLGWLVVPEALVG 252 (388)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChhhccCCEEEEEechhhcCCchhheeeeecCHHHHH
Confidence 999999998 67888899999999999999872111 11111122 3356789999999888 999999998887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+........ .+.+..+..++..+++.-.....++.+++.++..+++.+.|+++
T Consensus 253 ~l~~~~~~~~---------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 306 (388)
T PRK07337 253 TFEKLAQNLF---------------------ICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL 306 (388)
T ss_pred HHHHHHHHhc---------------------cCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7664432111 12344444444444431000113455666777777777777764
No 90
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.94 E-value=1.1e-24 Score=208.72 Aligned_cols=262 Identities=19% Similarity=0.239 Sum_probs=186.4
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHh--hccCCCCcchhhHHHHHHHHHHHHHHHHHcCC----------C
Q 017640 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAY--NSNVHRGIHFLSAKATDEYELARKKVAAFINA----------S 127 (368)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~----------~ 127 (368)
+++++.|..+.+. .+++.+.+++.+.+... ..++. .....++|++++++++. .
T Consensus 32 ~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~----------~~G~~~Lr~aia~~~~~~~~~~~~~~~~ 101 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPP----------TVGSPEAREAVATYWRNSFVHKESLKST 101 (412)
T ss_pred CCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCC----------CCCcHHHHHHHHHHHHhhccccccccCC
Confidence 4788999998875 36888888888776641 11111 12234788888888762 1
Q ss_pred -CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHh
Q 017640 128 -DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEM 204 (368)
Q Consensus 128 -~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~ 204 (368)
.+++|++|+|+++++.+++.++ +++||+|++++|+|+. +...++..|++++.++.++ ++.+|+++|+++
T Consensus 102 ~~~~~i~it~G~~~al~~~~~~~----~~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~ 173 (412)
T PTZ00433 102 IKKDNVVLCSGVSHAILMALTAL----CDEGDNILVPAPGFPH----YETVCKAYGIEMRFYNCRPEKDWEADLDEIRRL 173 (412)
T ss_pred CChhhEEEeCChHHHHHHHHHHh----cCCCCEEEEccCCccc----HHHHHHHcCCEEEEEecCccccCcCCHHHHHHH
Confidence 2359999999999999999988 8899999999998887 4455677799999999864 468899999999
Q ss_pred cccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCCCCccEEEecCcCcCCC
Q 017640 205 LSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQGLDADFLVASSHKMCGP 274 (368)
Q Consensus 205 l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~~~~d~~~~s~~K~~g~ 274 (368)
+.+++++|++++++||||.+++ +++|.++|++||++||+|++|..-.. ++ .+......++++|+||.||.
T Consensus 174 ~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~ 253 (412)
T PTZ00433 174 VDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVV 253 (412)
T ss_pred hccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCC
Confidence 9888999999999999999998 67788999999999999999873211 11 12222245788999999998
Q ss_pred Cc--ceEEEEc------ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 275 TG--IGFLFGK------SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 275 ~G--~G~l~~~------~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+| +||+++. +++++.+..... .....+.....++..+++.-.+.-++.++
T Consensus 254 pGlRlG~~i~~~p~~~~~~~~~~~~~~~~----------------------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 311 (412)
T PTZ00433 254 PGWRLGWLLLVDPHGNGGDFLDGMKRLGM----------------------LVCGPCSVVQAALGEALLNTPQEHLEQIV 311 (412)
T ss_pred CCeeEEEEEEeCCcccHHHHHHHHHHHhh----------------------ccCCCChHHHHHHHHHHhcCcHHHHHHHH
Confidence 88 9999972 234444332111 00123444444444444321111256667
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 017640 347 AYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~ 366 (368)
++.++..+.+.+.|.+..|+
T Consensus 312 ~~~~~~r~~l~~~L~~~~~~ 331 (412)
T PTZ00433 312 AKLEEGAMVLYNHIGECIGL 331 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCC
Confidence 77777788888888765443
No 91
>PLN02656 tyrosine transaminase
Probab=99.94 E-value=1.2e-24 Score=208.16 Aligned_cols=263 Identities=14% Similarity=0.166 Sum_probs=189.7
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCC----C-CCCcEEE
Q 017640 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA----S-DSGEIVF 134 (368)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~----~-~~~~v~~ 134 (368)
+++++.|+.+.+. ++|+.+.+++.+.+....... + .......++|++++++++. . .+++|++
T Consensus 30 ~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----Y----~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~ 101 (409)
T PLN02656 30 GKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNG----Y----APTVGLPQARRAIAEYLSRDLPYKLSLDDVFI 101 (409)
T ss_pred CCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCC----C----CCCCCCHHHHHHHHHHHHHhcCCCCCcccEEE
Confidence 4789999999885 668899999988776411110 1 0112233677777877742 2 2249999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEE
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (368)
|+|+++++.+++.++ +++||+|++++|.|+.. ...++..|++++.+++++ ++.+|+++++++++++++++
T Consensus 102 t~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (409)
T PLN02656 102 TSGCTQAIDVALSML----ARPGANILLPRPGFPIY----ELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVAL 173 (409)
T ss_pred eCChHHHHHHHHHHH----hCCCCeEEEeCCCCCcH----HHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEE
Confidence 999999999999988 79999999999998763 344455799999999853 46789999999998899999
Q ss_pred EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++|+||||.+++ +++|+++|++||++||+|++|..-. .++ .+......+++.|+||.|+.+| +||+
T Consensus 174 ~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~ 253 (409)
T PLN02656 174 VIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGWF 253 (409)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEEE
Confidence 99999999999987 7788999999999999999987321 111 1222346788999999999888 9999
Q ss_pred EEc--------ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 281 FGK--------SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 281 ~~~--------~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
+++ +++++.+..... . .+.++...+.++..+++...+.-++..+++.++.
T Consensus 254 i~~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 311 (409)
T PLN02656 254 VTTDPSGSFRDPKIVERIKKYFD---------------------I-LGGPATFIQAAVPTILEQTDESFFKKTINILKQS 311 (409)
T ss_pred EEeCcccccccHHHHHHHHHHHh---------------------h-hcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 984 355555442211 0 1134555666666666421111255666777777
Q ss_pred HHHHHHHHHhhcC
Q 017640 353 IICSIIVIQERHN 365 (368)
Q Consensus 353 ~~~l~~~l~~~~g 365 (368)
.+++.+.|.++++
T Consensus 312 r~~~~~~L~~~~~ 324 (409)
T PLN02656 312 SDICCDRIKEIPC 324 (409)
T ss_pred HHHHHHHHhhCCC
Confidence 8888888877543
No 92
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=4.1e-25 Score=208.24 Aligned_cols=207 Identities=18% Similarity=0.254 Sum_probs=166.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~-t~g~t~a~~ 143 (368)
.++++|+.+.+. .+++.+.+++.+.......++.. ...++|+.+++++|++++ +|++ ++|+++++.
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-----------~~~~lr~~ia~~~~~~~~-~i~~~~~Ga~~~i~ 101 (361)
T PRK00950 34 ESIIKLGSNENPLGPSPKAVEAIEKELSKIHRYPEP-----------DAPELREALSKYTGVPVE-NIIVGGDGMDEVID 101 (361)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----------CHHHHHHHHHHHhCCCHH-HEEEeCCCHHHHHH
Confidence 478999887654 56778888888777654333321 125899999999999765 8888 789999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
.++.++ +++||.|++++|.|+. +...++..|++++.++.+.++.+|++++++.+.++++++++++++||||.
T Consensus 102 ~~~~~~----~~~gd~vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~ 173 (361)
T PRK00950 102 TLMRTF----IDPGDEVIIPTPTFSY----YEISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGN 173 (361)
T ss_pred HHHHHh----cCCCCEEEEcCCChHH----HHHHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCC
Confidence 999887 7899999999996655 44556777999999997777789999999999888999999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEecCCcCCcc-cc-c-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCC
Q 017640 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHM-VV-D-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~-~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~ 292 (368)
++|.+++.++|+++|+++|+|++|..... +. . ....+..++++|++|.+|.+| +||+++++++++.++.
T Consensus 174 ~~~~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~ 247 (361)
T PRK00950 174 LIPEEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWLIDYYMR 247 (361)
T ss_pred CcCHHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHHHHHHHH
Confidence 99999999999999999999999963211 01 1 112245688899999999888 9999999988876653
No 93
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=1e-24 Score=204.56 Aligned_cols=245 Identities=20% Similarity=0.241 Sum_probs=186.2
Q ss_pred CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC
Q 017640 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG 157 (368)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g 157 (368)
+.++.+.++++++++.+..+. +.+....+..+..+++++.++++++.+ +.++++++++++..++.++ +++|
T Consensus 15 ~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~---~~iv~~sg~~a~~~~~~~~----~~~g 85 (349)
T cd06454 15 ANHPEVIEAAKEALDKYGVGA--GGSRLISGTSDLHEELEEELAEFHGKE---AALVFSSGYAANDGVLSTL----AGKG 85 (349)
T ss_pred CCCHHHHHHHHHHHHHhCCCC--CCcCeecCCchHHHHHHHHHHHHhCCC---CEEEeccHHHHHHHHHHHh----cCCC
Confidence 447899999999998753221 111111233667778999999999985 3455566678888888877 7899
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-----CceEEEEcccccccccccCHHHHHH
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-----KTKLVVIHHISNMLASILPIEEIVH 232 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG~~~~l~~i~~ 232 (368)
|.|++++++|++.... ++..|++++.++. +|.+.+++++++ +++++++++++|+||...|+++|.+
T Consensus 86 d~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~ 156 (349)
T cd06454 86 DLIISDSLNHASIIDG----IRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVD 156 (349)
T ss_pred CEEEEehhhhHHHHHH----HHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHH
Confidence 9999999988885433 4556999888763 377888888764 5688999999999999999999999
Q ss_pred HHHhcCCEEEEecCCcCCccc--------ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecc
Q 017640 233 WSHDVGAKVLVDACQSVPHMV--------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVF 304 (368)
Q Consensus 233 l~~~~g~~li~D~a~~~~~~~--------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~ 304 (368)
+|++||+++|+|++|+.|... ++....+.|++++|+||.+|++| |+++.++++++.+.+...
T Consensus 157 ~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g-G~i~~~~~~~~~~~~~~~--------- 226 (349)
T cd06454 157 LAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG-GYIAGSKELIDYLRSYAR--------- 226 (349)
T ss_pred HHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC-CEEECCHHHHHHHHHhch---------
Confidence 999999999999999876542 22234578999999999999876 888888887765543221
Q ss_pred cCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 305 LDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 305 ~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+ ..++.+...++++..+++++.. .+.++++..++.+++.+.|.+.
T Consensus 227 -----------~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 227 -----------GFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred -----------hhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc
Confidence 11 1246777778888889988776 4677899999999999998765
No 94
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=1.6e-24 Score=204.63 Aligned_cols=254 Identities=18% Similarity=0.215 Sum_probs=189.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+++.|..+... .+++.+.+++.+....+..++... ..++|+.+++++|++++ +|++|+|+++++..
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~y~~~~-----------~~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~ 99 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADELHRYPDGS-----------GFELKAALAEKFGVDPE-RIILGNGSDEILEL 99 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhcCCCCCc-----------HHHHHHHHHHHhCcCHH-HEEEcCCHHHHHHH
Confidence 567888887544 457788999888876543333211 13799999999998764 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||.|++.+|+|.. +...++..|++++.++. .++.+|++.+++++++++++|++++++||||.+
T Consensus 100 ~~~~l----~~~gd~vl~~~p~y~~----~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~ 170 (367)
T PRK02731 100 LARAY----LGPGDEVIYSEHGFAV----YPIAAQAVGAKPVEVPA-KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTY 170 (367)
T ss_pred HHHHh----cCCCCEEEEecCCHHH----HHHHHHHcCCeEEEecc-cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcC
Confidence 99888 7899999999997754 44445678999999998 457789999999998889999999999999999
Q ss_pred cCHHHHHHHHHhc--CCEEEEecCCcCCcc------cccC-CCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 225 LPIEEIVHWSHDV--GAKVLVDACQSVPHM------VVDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 225 ~~l~~i~~l~~~~--g~~li~D~a~~~~~~------~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
+|.++|.++++.+ |+++++|++|..... .++. +.....++++|++|.||.+| +||+++++++++.+...
T Consensus 171 ~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~ 250 (367)
T PRK02731 171 LPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRV 250 (367)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCHHHHHHHHHc
Confidence 9999999998874 899999999863221 1111 12235688889999998877 79999999888776543
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
... + ..+..++.++..+++. ....+.++++.+++.+++.+.|++. |+
T Consensus 251 ~~~--------------------~---~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 297 (367)
T PRK02731 251 RQP--------------------F---NVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GL 297 (367)
T ss_pred cCC--------------------C---CCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 210 1 1233444444444432 1125677788888888888888775 54
No 95
>PRK08912 hypothetical protein; Provisional
Probab=99.94 E-value=2e-24 Score=205.33 Aligned_cols=259 Identities=16% Similarity=0.150 Sum_probs=182.2
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCC-cEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSG-EIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~-~v~~t~g~ 138 (368)
.+.+.|..+.+. +.|+.+.+++.+.+... . ..+.. .....++|+++++++ |.+ .++ +|++|+|+
T Consensus 26 ~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~--~---~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 96 (387)
T PRK08912 26 HGAINLGQGFPDDPGPEDVRRAAADALLDG--S---NQYPP----MMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGA 96 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcC--C---CCCCC----CCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCc
Confidence 456788887665 44677777777665421 0 01111 112235666666654 543 233 89999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
++++..++.++ +++||+|++.+|+|+. +...++..|++++.+++++ ++.+|++.+++.+.+++++++++++
T Consensus 97 ~~al~~~~~~~----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 168 (387)
T PRK08912 97 TEALAAALLAL----VEPGDEVVLFQPLYDA----YLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNP 168 (387)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCchh----hHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCC
Confidence 99999999988 8899999999998876 4555677799999999864 5788999999999888999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCC-CCccEEEecCcCcCCCCc--ceEEEEcc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~ 284 (368)
+||||.++| +++|.++|++|++++|+|++|.... .++ .+.. .+.+++++|+||.||.+| +||+++++
T Consensus 169 ~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~ 248 (387)
T PRK08912 169 LNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP 248 (387)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH
Confidence 999999999 6678999999999999999986211 111 2222 246799999999999888 99999999
Q ss_pred cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 285 ~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++++.+...... ...+.+.....++..++....+ -.+.++++.++..+++.+.|++.
T Consensus 249 ~~~~~l~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 305 (387)
T PRK08912 249 PLLRVLAKAHQF---------------------LTFTTPPNLQAAVAYGLGKPDD-YFEGMRADLARSRDRLAAGLRRI 305 (387)
T ss_pred HHHHHHHHHHhh---------------------ccccCChHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 988776533210 0012222233334444431111 13566777778888888888765
No 96
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.93 E-value=8.6e-25 Score=213.06 Aligned_cols=252 Identities=17% Similarity=0.207 Sum_probs=176.1
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC----CC-CCCcEEEeCCHHHHHHHHHHHccCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN----AS-DSGEIVFTKNATEAINLVAYSWGLSN 153 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~----~~-~~~~v~~t~g~t~a~~~~~~~~~~~~ 153 (368)
.|..+++++.+.+...... .+. +.......++|++++++++ .+ .+++|++|+|+++++.+++.++
T Consensus 89 ~P~~~~~~~~~~~~~~~~~--~~~----Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l---- 158 (481)
T PTZ00377 89 FPADVVARAKEYLNAIGGG--TGA----YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLL---- 158 (481)
T ss_pred CCHHHHHHHHHHHHhCCCc--ccC----cCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh----
Confidence 3567777776655543211 111 2223345577777887765 22 2359999999999999999988
Q ss_pred C-CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhccc------CceEEEEcccccccccc
Q 017640 154 L-KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASI 224 (368)
Q Consensus 154 ~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~ 224 (368)
+ ++||+|++++|.|+. +...++..|++++.++++++ +.+|+++|++++++ +++++++++|+||||.+
T Consensus 159 ~~~~gD~Vlv~~P~y~~----y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 159 IGDPSDGVMIPIPQYPL----YSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred ccCCCCEEEECCCCchh----HHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 6 799999999998887 44555667999999998743 67899999999865 78999999999999999
Q ss_pred cC---HHHHHHHHHhcCCEEEEecCCcCCcc----c---c-----cCCCC----CccEEEecCcCc-CCCCc--ceEEEE
Q 017640 225 LP---IEEIVHWSHDVGAKVLVDACQSVPHM----V---V-----DVQGL----DADFLVASSHKM-CGPTG--IGFLFG 282 (368)
Q Consensus 225 ~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~---~-----~~~~~----~~d~~~~s~~K~-~g~~G--~G~l~~ 282 (368)
++ +++|+++|++||++||+|++|..-.. + + ++... ...+++.|+||. +|.+| +||+++
T Consensus 235 ~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 235 LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEE
Confidence 99 78999999999999999999873111 1 1 11111 124788899995 68888 999987
Q ss_pred ---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----------HHHhCHHHHHHHH
Q 017640 283 ---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY----------LSTIGMQKIHAYE 349 (368)
Q Consensus 283 ---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~----------~~~~g~~~i~~~~ 349 (368)
++++++.+...... ..+++..+..++..+++. +.. .+..++++.
T Consensus 315 ~~~p~~li~~l~~~~~~----------------------~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~ 371 (481)
T PTZ00377 315 TNIPPEVREQIYKLASI----------------------NLCSNVVGQLMTGLMCNPPREGDASYPLYKR-ERDAIFTSL 371 (481)
T ss_pred eCCCHHHHHHHHHHhhe----------------------ecCCChHHHHHHHHHhCCCCCCcccHHHHHH-HHHHHHHHH
Confidence 77887766543210 013455566666666631 111 134444456
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 017640 350 VKWIICSIIVIQERHNTT 367 (368)
Q Consensus 350 ~~l~~~l~~~l~~~~g~t 367 (368)
++..+.+.+.|.+++|++
T Consensus 372 ~~rr~~l~~~L~~~~g~~ 389 (481)
T PTZ00377 372 KRRAELLTDELNKIEGVS 389 (481)
T ss_pred HHHHHHHHHHHhcCCCcE
Confidence 677777888887776643
No 97
>PRK09082 methionine aminotransferase; Validated
Probab=99.93 E-value=1.5e-24 Score=206.03 Aligned_cols=262 Identities=17% Similarity=0.142 Sum_probs=190.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC--CCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD--SGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~--~~~v~~t~g~t~a~ 142 (368)
.+.++|+.+... +.++.+.+++.+.+.... . .+....+..+..+.+.+.+.+++|... +++|++|+|+++++
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~-~----~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al 104 (386)
T PRK09082 30 HGAINLSQGFPDFDGPPYLVEALAYAMAAGH-N----QYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEAL 104 (386)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHHcCC-C----CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHH
Confidence 467888887766 457788888887765321 1 111122335555667777777778753 23799999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
..++.++ +++||+|++.+|.|.+.. ..++..|++++.++.+ +++.+|++++++++++++++|++++++|||
T Consensus 105 ~~~~~~~----~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPt 176 (386)
T PRK09082 105 FAAILAL----VRPGDEVIVFDPSYDSYA----PAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPS 176 (386)
T ss_pred HHHHHHH----cCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCC
Confidence 9999988 889999999999888754 3445569999999997 457889999999998899999999999999
Q ss_pred ccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------c-ccCCC-CCccEEEecCcCcCCCCc--ceEEEEcccccc
Q 017640 222 ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------V-VDVQG-LDADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (368)
Q Consensus 222 G~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~-~~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~ 288 (368)
|.+++ +++|.++|++||+++|+|++|..... . ..... .+..++++|+||.||.+| +||+++++++++
T Consensus 177 G~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~ 256 (386)
T PRK09082 177 GTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSA 256 (386)
T ss_pred CcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHH
Confidence 99987 77889999999999999999863211 1 12222 346799999999999888 999999999887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
.++.... ....+.+.....++...++...+ -.+++++..++..+++.+.|++
T Consensus 257 ~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~ 308 (386)
T PRK09082 257 EFRKVHQ---------------------YNTFTVNTPAQLALADYLRAEPE-HYLELPAFYQAKRDRFRAALAN 308 (386)
T ss_pred HHHHHHh---------------------hhcCCCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 7664321 01113444455545444432111 2455667777888888888876
No 98
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.1e-24 Score=202.59 Aligned_cols=252 Identities=13% Similarity=0.110 Sum_probs=186.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+..++|+.+..+ ++++.+.+++.+.......++..+ ..++|+++|++++++++ +|++|+|+++++..
T Consensus 32 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~~~~-----------~~~Lr~~ia~~~~~~~~-~I~it~G~~~~l~~ 99 (369)
T PRK08153 32 PFRARIGANESGFGPSPSVIAAMREAAAEIWKYGDPE-----------NHDLRHALAAHHGVAPE-NIMVGEGIDGLLGL 99 (369)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHHHhhcCCCCc-----------cHHHHHHHHHHhCCCHH-HEEEcCCHHHHHHH
Confidence 345699998877 678899999988765433333211 34799999999998765 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-cCceEEEEccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLAS 223 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~ 223 (368)
++.++ +++||.|++.+|+|+... ..++..|++++.+|.+.++ +|++++++.+. .+++++++++|+||||.
T Consensus 100 ~~~~~----~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~vp~~~~~-~~~~~l~~~~~~~~~~~i~l~~P~NPtG~ 170 (369)
T PRK08153 100 IVRLY----VEPGDPVVTSLGAYPTFN----YHVAGFGGRLVTVPYRDDR-EDLDALLDAARRENAPLVYLANPDNPMGS 170 (369)
T ss_pred HHHHh----cCCCCEEEECCCcchHHH----HHHHHcCCeEEEeeCCCCC-CCHHHHHHHhcccCCcEEEEeCCCCCCCC
Confidence 99988 889999999999888744 3345569999999986554 68999887664 57899999999999999
Q ss_pred ccCHHHHHHHHHh--cCCEEEEecCCcCCcc---cccCC-CCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCccc
Q 017640 224 ILPIEEIVHWSHD--VGAKVLVDACQSVPHM---VVDVQ-GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 224 ~~~l~~i~~l~~~--~g~~li~D~a~~~~~~---~~~~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~ 295 (368)
++|.+++.++++. ++++||+|++|..-.. ...+. .....+++.|+||.+|.+| +||+++++++++.+.....
T Consensus 171 ~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~ 250 (369)
T PRK08153 171 WHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRN 250 (369)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhc
Confidence 9998777777664 3899999999872211 01111 1235688999999999888 8999999988876653321
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..+.+...+.++..+++. ..-.+.++++..+..+++.+.|++.
T Consensus 251 -----------------------~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~ 293 (369)
T PRK08153 251 -----------------------HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN 293 (369)
T ss_pred -----------------------CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 013456666666666642 1124566677777777777777653
No 99
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.93 E-value=1.1e-24 Score=209.90 Aligned_cols=255 Identities=13% Similarity=0.041 Sum_probs=179.3
Q ss_pred CeEEeccCCCCC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCC--CCCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA--SDSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~--~~~~~v~~t~g~t~a~~ 143 (368)
..+.|..+.... .++.+.+++.+.......++. .....++|+.++++++. .++++|++|+|+++++.
T Consensus 86 ~~i~L~~g~p~~~~~p~~~~~~~~~~~~~~~Y~~----------~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 86 PLHDLAGGNPDPQRLPDLSRYFARLSRTPRLYGD----------APVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIE 155 (431)
T ss_pred hhhhhhcCCCChhHhHHHHHHHHHhhhhhhhcCC----------cCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHH
Confidence 345666655442 334566666554332211111 22234688889988874 33358999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEc-ccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIH-HISNMLA 222 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~-~~~n~tG 222 (368)
+++.++ +++||.|++.+|+|+. +...++..|++++.+++++++ +|++.|++++++++++++++ +++||||
T Consensus 156 ~~~~~l----~~pgd~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~g-~~~~~l~~~~~~~~k~i~~~p~p~NPTG 226 (431)
T PRK15481 156 RLLCAH----LLPGDSVAVEDPCFLS----SINMLRYAGFSASPVSVDAEG-MQPEKLERALAQGARAVILTPRAHNPTG 226 (431)
T ss_pred HHHHHh----CCCCCEEEEeCCCcHH----HHHHHHHcCCeEEeeccCCCC-CCHHHHHHHHhcCCCEEEECCCCCCCCC
Confidence 999998 8999999999997766 555666779999999997655 79999999998888888776 9999999
Q ss_pred cccCH---HHHHHHHHhc-CCEEEEecCCcCC----ccc-ccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCC
Q 017640 223 SILPI---EEIVHWSHDV-GAKVLVDACQSVP----HMV-VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMP 291 (368)
Q Consensus 223 ~~~~l---~~i~~l~~~~-g~~li~D~a~~~~----~~~-~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~ 291 (368)
.+++. ++|.++|++| +++||+|++|..- ..+ +.. .....++++|+||.|| +| +||++.++++++.+.
T Consensus 227 ~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~~~~~~~~ 304 (431)
T PRK15481 227 CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASDSATSARLR 304 (431)
T ss_pred ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCCHHHHHHHH
Confidence 99995 4999999999 9999999998722 111 111 2246689999999999 68 999999998877765
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~-~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..... .....+.....++..+++.-.. .-++.+++..++..+++.+.|.+.
T Consensus 305 ~~~~~---------------------~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~ 356 (431)
T PRK15481 305 LRLNS---------------------GTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY 356 (431)
T ss_pred HHHhc---------------------cccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 32210 0113455555555555542110 014566777777777788877764
No 100
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.4e-24 Score=203.60 Aligned_cols=253 Identities=15% Similarity=0.134 Sum_probs=182.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++++.|+.+.+. .+++.+.+++.+.......+++. .. .++|+++++++|++++ +|++|+|+++++..
T Consensus 36 ~~~i~l~~~~~~~~~~~~~~~al~~~~~~~~~Y~~~----------~g-~~lr~~ia~~~~~~~~-~i~~t~G~~~~l~~ 103 (371)
T PRK05166 36 PRIAKLGSNENPLGPSPAVRRAFADIAELLRLYPDP----------QG-RALREAIAARTGVPAD-RIILGNGSEDLIAV 103 (371)
T ss_pred cceEEcCCCCCCCCCCHHHHHHHHHHHHHhhcCCCC----------cH-HHHHHHHHHHhCcCHH-HEEEcCCHHHHHHH
Confidence 567899988766 56778888887655443323221 11 2699999999998764 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||.|++.+|+|+. +...++..|++++.++.++++.+|++++++.++++++++++++++||||.+
T Consensus 104 ~~~~~----~~~gd~vli~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~ 175 (371)
T PRK05166 104 ICRAV----LRPGDRVVTLYPSFPL----HEDYPTMMGARVERVTVTPDLGFDLDALCAAVARAPRMLMFSNPSNPVGSW 175 (371)
T ss_pred HHHHh----cCCCCEEEEcCCChHH----HHHHHHHcCCeEEEeecCCCCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCC
Confidence 99988 8999999999997765 455667789999999998888899999999998889999999999999999
Q ss_pred cCHHHHHHHHHh--cCCEEEEecCCcCCcc-----c-cc-CC-CCCccEEEecCcCcCCCCc--ceEEEE-cccccccCC
Q 017640 225 LPIEEIVHWSHD--VGAKVLVDACQSVPHM-----V-VD-VQ-GLDADFLVASSHKMCGPTG--IGFLFG-KSDLLSAMP 291 (368)
Q Consensus 225 ~~l~~i~~l~~~--~g~~li~D~a~~~~~~-----~-~~-~~-~~~~d~~~~s~~K~~g~~G--~G~l~~-~~~li~~l~ 291 (368)
+|.+++.++++. +++++|+|++|..-.. + +. +. .....+++.|+||.||.+| +||+++ ++++++.+.
T Consensus 176 ~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~ 255 (371)
T PRK05166 176 LTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLD 255 (371)
T ss_pred CCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHH
Confidence 997777666653 4789999999862211 1 11 11 1234688999999999888 999876 566665554
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..... ...+.....++..++..- .-+++..++..+..+++.+.|++.
T Consensus 256 ~~~~~-----------------------~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~ 302 (371)
T PRK05166 256 RVRTP-----------------------FNVNGAAQAAALAALDDE--EHLAKGVALALAERERLKKELAEM 302 (371)
T ss_pred HhccC-----------------------CCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHC
Confidence 32210 123444443444444321 124555566666777778887765
No 101
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=1.5e-24 Score=203.84 Aligned_cols=253 Identities=12% Similarity=0.096 Sum_probs=182.2
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+++.|+.+.+. ++|+.+++++.+.+.....+|. ....++|++++++++.+++ +|++|+|+++++..
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~~~y~~-----------~~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~ 87 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDCAERYPD-----------VEYRHLHQALARHHQVPAS-WILAGNGETESIFA 87 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHhcccCcC-----------ccHHHHHHHHHHHhCcChh-hEEECCCHHHHHHH
Confidence 567899988776 7889999999887765432221 1145899999999999765 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
++.++ .+|+ +++.+|.|.. +...++..|++++.++++++ +.+| +++++.+.+++++|++++|+||||
T Consensus 88 ~~~~l-----~~g~-viv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG 156 (356)
T PRK08056 88 VVSGL-----KPRR-AMIVTPGFAE----YRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTG 156 (356)
T ss_pred HHHHh-----CCCC-EEEeCCCcHH----HHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCC
Confidence 99865 4576 5667786554 55667778999999998743 4555 456666778899999999999999
Q ss_pred cccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccc-cCCCCCccEEEecCcCcCCCCc--ceEEEEc-ccccccCC
Q 017640 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVV-DVQGLDADFLVASSHKMCGPTG--IGFLFGK-SDLLSAMP 291 (368)
Q Consensus 223 ~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~-~~li~~l~ 291 (368)
.+++ +++|+++|++||+++|+|++|.--. ..+ .+...+.++++.|+||.||.+| +||++++ +++++.+.
T Consensus 157 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~ 236 (356)
T PRK08056 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMR 236 (356)
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEechhhccCcchhheeeecCCHHHHHHHH
Confidence 9999 7889999999999999999975211 001 1233457799999999999888 9999985 45655554
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.... ..+.+.....++..+++. ..-.+.++++.++.++++.+.|.+++++
T Consensus 237 ~~~~-----------------------~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 286 (356)
T PRK08056 237 RQQM-----------------------PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLL 286 (356)
T ss_pred HhCC-----------------------CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 3221 113333444444444421 1114566677778888888888776554
No 102
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=3.8e-24 Score=204.50 Aligned_cols=202 Identities=15% Similarity=0.151 Sum_probs=157.8
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEE
Q 017640 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIV 133 (368)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~ 133 (368)
+++++.|..+.+. ++|+.+.+++.+.+.....+ .|. ......++|++++++++ .++ ++|+
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~----~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~-~~I~ 101 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFN----SYA----PTGGILPARRAIADYLSNDLPYQLSP-DDVY 101 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCC----CCC----CCCCCHHHHHHHHHHHHhhcCCCCCH-hhEE
Confidence 4789999998875 78889999998877642101 010 01122367788888773 333 5999
Q ss_pred EeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcccCceE
Q 017640 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSRKTKL 211 (368)
Q Consensus 134 ~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~~ 211 (368)
+|+|+++++.+++.++ +++||.|++.+|.|+. +...++..|++++.++++ .++.+|+++|++++.++++.
T Consensus 102 it~G~~~al~~~~~~l----~~~gd~v~v~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 173 (409)
T PLN00143 102 LTLGCKHAAEIIIKVL----ARPEANILLPRPGFPD----VETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIA 173 (409)
T ss_pred EecChHHHHHHHHHHH----cCCCCEEEEcCCCCcC----HHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEE
Confidence 9999999999999998 8999999999998887 444556679999999985 34678999999999888999
Q ss_pred EEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCCCCccEEEecCcCcCCCCc--ceE
Q 017640 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGF 279 (368)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~ 279 (368)
+++++|+||||.+++ +++|+++|++|+++||+|++|..-. .++ .+......+++.|+||.|+.+| +||
T Consensus 174 ~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~ 253 (409)
T PLN00143 174 MVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGW 253 (409)
T ss_pred EEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEE
Confidence 999999999999999 7788889999999999999987311 111 1222235689999999999888 999
Q ss_pred EEEc
Q 017640 280 LFGK 283 (368)
Q Consensus 280 l~~~ 283 (368)
++++
T Consensus 254 ~v~~ 257 (409)
T PLN00143 254 LVTC 257 (409)
T ss_pred EEee
Confidence 9983
No 103
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=2.5e-24 Score=205.44 Aligned_cols=264 Identities=14% Similarity=0.135 Sum_probs=186.2
Q ss_pred CCeEEeccCCCC----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEe
Q 017640 66 KKLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t 135 (368)
.+++.|..+.++ ++++.+.+++.+.+.... + .+ .......++|+++++++ | .++ ++|++|
T Consensus 30 ~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~-~----~Y----~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~it 99 (398)
T PRK08363 30 IKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGH-N----YY----GPSEGLPELREAIVKREKRKNGVDITP-DDVRVT 99 (398)
T ss_pred CCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCC-C----CC----CCCCCcHHHHHHHHHHHHHhcCCCCCh-hhEEEe
Confidence 578999998873 578888888887765320 0 01 01122347888888877 3 333 499999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE-eCCCC-CCCCHHHHHHhcccCceEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL-NLNDD-ESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v-~~~~~-~~~d~~~l~~~l~~~~~~v~ 213 (368)
+|+++|+.+++.++ +++||.|++.+|+|+... ..++..|.+++.+ +.+++ +.+|++.+++++.+++++|+
T Consensus 100 ~G~~~al~~~~~~~----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 171 (398)
T PRK08363 100 AAVTEALQLIFGAL----LDPGDEILIPGPSYPPYT----GLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIA 171 (398)
T ss_pred CCHHHHHHHHHHHh----CCCCCEEEEcCCCCcchH----HHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEE
Confidence 99999999999988 899999999999888753 4556678888888 44433 57899999999988899999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----c-ccCCCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----V-VDVQGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~-~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+++++||||.+++ +++|.++|+++|+++|+|++|..... + ..+......+++.|+||.|+.+| +||+++
T Consensus 172 l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~ 251 (398)
T PRK08363 172 VINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYF 251 (398)
T ss_pred EECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEEEEE
Confidence 9999999999999 88899999999999999999873211 1 11222234678899999988777 999998
Q ss_pred --cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 283 --KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 283 --~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
++++++.+........ ... .+.+.....++..++....+ -++.++++.++..+++.+.|
T Consensus 252 ~~~~~~~~~l~~~~~~~~-----------------~~~-~~~s~~~q~~~~~~l~~~~~-~l~~~~~~~~~~~~~l~~~L 312 (398)
T PRK08363 252 VDPEGKLAEVREAIDKLA-----------------RIR-LCPNTPAQFAAIAGLTGPMD-YLEEYMKKLKERRDYIYKRL 312 (398)
T ss_pred eCcHHHHHHHHHHHHHHh-----------------ccc-ccCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHH
Confidence 5566555443221000 000 13344444555555542111 25566777888888888888
Q ss_pred HhhcCC
Q 017640 361 QERHNT 366 (368)
Q Consensus 361 ~~~~g~ 366 (368)
.+++++
T Consensus 313 ~~~~~~ 318 (398)
T PRK08363 313 NEIPGI 318 (398)
T ss_pred hcCCCC
Confidence 776553
No 104
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.5e-24 Score=199.71 Aligned_cols=204 Identities=17% Similarity=0.275 Sum_probs=161.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.+.++|+.+.+. ++++.+.+++.+.+.. +..++. ....++|++++++++.+++ +|++|+|+++++
T Consensus 18 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----------~g~~~lr~~ia~~~~~~~~-~I~~t~G~~~~l 85 (337)
T PRK03967 18 NYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH-----------ITSDPLREAIAEFYGLDAE-NIAVGNGSDELI 85 (337)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHhhcCccccCCC-----------CCHHHHHHHHHHHhCcCcc-eEEEcCCHHHHH
Confidence 457999999877 6778999998887753 222221 1234799999999998764 999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
..++..+ +||+|++.+|.|+. +...++..|++++.++.++++.+|++.+++.+ ++++++++++|+||||
T Consensus 86 ~~~~~~~------~gd~V~v~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG 154 (337)
T PRK03967 86 SYLVKLF------EGKHIVITPPTFGM----YSFYAKLNGIPVIDVPLKEDFTIDGERIAEKA-KNASAVFICSPNNPTG 154 (337)
T ss_pred HHHHHHh------CCCeEEEeCCChHH----HHHHHHHcCCeEEEeecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCC
Confidence 9887654 69999999997763 55566778999999999877889999998875 5678999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcc-c-cc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHM-V-VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~-~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
.+++.++|.++++ +++++|+|++|..-.. + .. .......+++.|+||.||.+| +||+++++++++.+...
T Consensus 155 ~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~ 229 (337)
T PRK03967 155 NLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEIIDALYRI 229 (337)
T ss_pred CCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEEecchHhhcchhhhheeeecCHHHHHHHHhh
Confidence 9999999999995 7999999999972110 1 11 112235688899999999888 99999999888776643
No 105
>PRK09148 aminotransferase; Validated
Probab=99.93 E-value=4.1e-24 Score=204.14 Aligned_cols=261 Identities=15% Similarity=0.129 Sum_probs=178.5
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKN 137 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g 137 (368)
+++++.|+.+.+. ++++.+.+++.+.+... ....|. ......++|+++++++ |.+ ++++|++|+|
T Consensus 29 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~----~~~~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G 100 (405)
T PRK09148 29 GADIIDLGMGNPDLPTPQHIVDKLCETAQDP----RTHRYS----ASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLG 100 (405)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHcCc----ccCCCC----CCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCC
Confidence 3567899888776 45777888877665321 101111 1122336777777766 443 3237999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
+++++..++.++ +++||.|++++|+|+..... ++..|++++.++.+.+ +..+++++.+...+++++++++
T Consensus 101 ~~~al~~~~~~l----~~~gd~Vl~~~P~y~~~~~~----~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~ 172 (405)
T PRK09148 101 SKEGFANMAQAI----TAPGDVILCPNPSYPIHAFG----FIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVN 172 (405)
T ss_pred hHHHHHHHHHHh----cCCCCEEEEcCCCCcccHHH----HHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEe
Confidence 999999999998 89999999999999885443 3456999999998754 3334444433344678999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----c--cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEE
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M--VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~--~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+|+||||.+++ +++|.++|++||++||+|++|..-. . .+ .+.. .+..+++.|+||.+|.+| +||+++
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~ 252 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG 252 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC
Confidence 99999999999 4688899999999999999987311 1 11 1211 234567899999999888 999999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+..... +...+.+.+...++..+++..+. -++.++++.++..+++.+.|++
T Consensus 253 ~~~~i~~l~~~~~---------------------~~~~~~~~~~q~~~~~~L~~~~~-~~~~~~~~~~~~r~~l~~~L~~ 310 (405)
T PRK09148 253 NERLIAALTRVKS---------------------YLDYGAFTPIQVAATAALNGPQD-CIAEMRELYKKRRDVLVESFGR 310 (405)
T ss_pred CHHHHHHHHHHHH---------------------HhccCCChHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9998877653321 00112333444444444432111 2456677778888888888876
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 311 ~ 311 (405)
T PRK09148 311 A 311 (405)
T ss_pred c
Confidence 3
No 106
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.93 E-value=4.7e-24 Score=203.59 Aligned_cols=259 Identities=18% Similarity=0.221 Sum_probs=184.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC-----CCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-----ASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-----~~~~~~v~~t~g~t 139 (368)
.++++|+.+.+. ++++.+.+++.+.......++ ......++|++++++++ .++ ++|++|+|++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~Y~----------~~~g~~~lr~~ia~~~~~~~~~~~~-~~i~~t~G~~ 98 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYDEEVLAYS----------HSQGIPELREAFAKYYKKWGIDVEP-DEILITNGGS 98 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHhcCCcCcC----------CCCCCHHHHHHHHHHHHHhCCCCCc-ceEEEcCChH
Confidence 568999999887 578888888776543221111 12234478888888873 444 4999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CC-C-CCHHHHHHhcccCceEEEEcc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DE-S-PDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-~-~d~~~l~~~l~~~~~~v~~~~ 216 (368)
+++..++.++ +++||+|++++|.|... ...++..|++++.++.+. ++ . .++++|++++++++++|++++
T Consensus 99 ~al~~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~ 170 (397)
T PRK07568 99 EAILFAMMAI----CDPGDEILVPEPFYANY----NGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISN 170 (397)
T ss_pred HHHHHHHHHh----cCCCCEEEEecCCCccH----HHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEEC
Confidence 9999999887 78999999999987753 344566799999999863 33 3 367999999988999999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----c--c-ccCCC-CCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M--V-VDVQG-LDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~--~-~~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
++||||.+++ +++|+++|+++|+++|+|++|..-. . . .++.. .+..+++.|+||.||++| +||++++
T Consensus 171 p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~ 250 (397)
T PRK07568 171 PGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISK 250 (397)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecC
Confidence 9999999998 6789999999999999999987221 1 1 12222 235688899999999877 9999985
Q ss_pred -ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 284 -SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 284 -~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
+++++.+...... ..+.+.....++..+++..+. -.+.++++.++..+.+.+.|.+
T Consensus 251 ~~~~~~~~~~~~~~----------------------~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 307 (397)
T PRK07568 251 NKELIAAAMKLCQA----------------------RLSPPTLEQIGAAALLDTPES-YFDEVREEYKKRRDILYEELNK 307 (397)
T ss_pred CHHHHHHHHHHhhc----------------------cCCCCcHHHHHHHHHhhCCHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 5666544322110 013344455555555543222 2556677777888888888877
Q ss_pred hcCC
Q 017640 363 RHNT 366 (368)
Q Consensus 363 ~~g~ 366 (368)
+.++
T Consensus 308 ~~~~ 311 (397)
T PRK07568 308 IPGV 311 (397)
T ss_pred CCCc
Confidence 6553
No 107
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-24 Score=203.50 Aligned_cols=248 Identities=16% Similarity=0.137 Sum_probs=176.5
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.+.+.|+.+.+...++... .......+|..+ ..++|+++|+++|++++ +|++|+|+++++.++
T Consensus 31 ~~~~~l~~ne~~~~~~~~~-----~~~~~~~Yp~~~-----------~~~Lr~aia~~~~~~~~-~I~it~Gs~~~i~~~ 93 (354)
T PRK04635 31 RGDIWINANESPFNNEYKL-----DLARLNRYPECQ-----------PPELINAYSAYAGVAPE-QILTSRGADEAIELL 93 (354)
T ss_pred CCcEEeeCCCCCCCCChhh-----hhHHhccCCCCC-----------HHHHHHHHHHHhCcCHH-HEEEeCCHHHHHHHH
Confidence 3558888888774333211 111222333221 23799999999999875 999999999999999
Q ss_pred HHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 146 AYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 146 ~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
+.++ +++| |+|++.+|.|+. +...++..|++++.+|+++++.+|++.++ .+ +++++|++++|+||||.+
T Consensus 94 ~~~~----~~~g~d~vlv~~P~y~~----y~~~~~~~g~~v~~v~~~~~~~~~~~~l~-~~-~~~~li~i~nP~NPTG~~ 163 (354)
T PRK04635 94 IRAF----CEPGQDSIACFGPTYGM----YAISAETFNVGVKALPLTADYQLPLDYIE-QL-DGAKLVFICNPNNPTGTV 163 (354)
T ss_pred HHHh----cCCCCCeEEEcCCChHH----HHHHHHHcCCEEEEEecCCCCCCCHHHHH-hc-cCCCEEEEeCCCCCCCcc
Confidence 9998 7888 899999997665 55667778999999999877888999887 34 688999999999999999
Q ss_pred cCHHHHHHHHHhc-CCEEEEecCCcCCccc---ccC-CCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCC
Q 017640 225 LPIEEIVHWSHDV-GAKVLVDACQSVPHMV---VDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 225 ~~l~~i~~l~~~~-g~~li~D~a~~~~~~~---~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~ 297 (368)
+|.+++.++++.. +++||+|++|...... .++ ......+++.|+||.||++| +||+++++++++.+......+
T Consensus 164 ~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~~ 243 (354)
T PRK04635 164 IDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRVIAPY 243 (354)
T ss_pred CCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhhcCCC
Confidence 9999999998863 7999999998632211 111 12234578889999999888 899999999988766433211
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH---HHHHHHHHHHHHHHHHhhcCC
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI---HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i---~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+.+..... .++..+.+.+.+.+ .++..+..+++.+.|.+.+++
T Consensus 244 -----------------------~~~~~~~~---~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (354)
T PRK04635 244 -----------------------PVPLPVSE---IATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGA 289 (354)
T ss_pred -----------------------CCCHHHHH---HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 22332222 33444444344433 344555567788888776443
No 108
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.93 E-value=2.3e-24 Score=205.87 Aligned_cols=262 Identities=14% Similarity=0.154 Sum_probs=185.2
Q ss_pred CCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC-----CCCCCcEEEe
Q 017640 66 KKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-----ASDSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-----~~~~~~v~~t 135 (368)
++++.|+.+.+. ++++.+.+++.+.+...... ++.......++|++++++++ .++ ++|++|
T Consensus 31 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~Y~~~~g~~~lr~aia~~~~~~~~~~~~-~~i~~t 101 (401)
T TIGR01264 31 KPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYN--------GYAPTVGALSAREAIASYYHNPDGPIEA-DDVVLC 101 (401)
T ss_pred CCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCC--------CCCCCCCCHHHHHHHHHHHhhcCCCCCH-HHEEEC
Confidence 567899988763 56788888888776542111 01111223478888999887 333 489999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~ 213 (368)
+|+++++.+++.++ +++||+|++++|.|.. +...++..|++++.++++. ++.+|++.+++.+.+++++++
T Consensus 102 ~G~~~al~~~~~~l----~~~gd~v~i~~P~y~~----~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~ 173 (401)
T TIGR01264 102 SGCSHAIEMCIAAL----ANAGQNILVPRPGFPL----YETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALI 173 (401)
T ss_pred cChHHHHHHHHHHh----CCCCCEEEEeCCCChh----HHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEE
Confidence 99999999999988 7899999999997765 4556677799999998863 478899999999988899999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCCCCccEEEecCcCcCCCCc--ceEEE
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+++++||||.+++ +++|+++|+++|+++|+|++|..-. .++ .+......+++.|+||.|+.+| +||++
T Consensus 174 ~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv 253 (401)
T TIGR01264 174 VNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWII 253 (401)
T ss_pred EcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEE
Confidence 9999999999998 7788999999999999999987311 111 1211123588999999999888 99999
Q ss_pred Ecc------cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 282 GKS------DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 282 ~~~------~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
+++ ++++.+..... ....++.....++..+++...+.-++..+++.++..++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~ 311 (401)
T TIGR01264 254 IHDRRGILRDIRDGLVKLSQ----------------------RILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAML 311 (401)
T ss_pred ecCcchhHHHHHHHHHHHhh----------------------ccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 874 23322221110 01123444455555555421112255666777777788
Q ss_pred HHHHHHhhcCC
Q 017640 356 SIIVIQERHNT 366 (368)
Q Consensus 356 l~~~l~~~~g~ 366 (368)
+.+.|.+.+|+
T Consensus 312 l~~~L~~~~~~ 322 (401)
T TIGR01264 312 CYGALAAVPGL 322 (401)
T ss_pred HHHHHHhCCCC
Confidence 88888776553
No 109
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.8e-24 Score=202.87 Aligned_cols=217 Identities=15% Similarity=0.151 Sum_probs=163.9
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC
Q 017640 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 192 (368)
.++++++++++|++++ +|++|+|+++++.++++++ +++| |.|++.+|+|+. +...++..|++++.++.++
T Consensus 60 ~~l~~~~a~~~g~~~~-~I~~~~Gs~e~i~~~~~~~----~~~g~~~vli~~P~y~~----y~~~~~~~G~~~~~v~~~~ 130 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-QVLVSRGADEGIELLIRAF----CEPGKDAILYCPPTYGM----YSVSAETIGVEIRTVPTLD 130 (351)
T ss_pred HHHHHHHHHHhCCCHH-HEEEcCCHHHHHHHHHHHh----cCCCCCEEEEcCCCHHH----HHHHHHHcCCEEEEeecCC
Confidence 3799999999999875 9999999999999999988 7887 899999996654 6667788899999999988
Q ss_pred CCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh--cCCEEEEecCCcCCccc---cc-CCCCCccEEEe
Q 017640 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHMV---VD-VQGLDADFLVA 266 (368)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~~---~~-~~~~~~d~~~~ 266 (368)
++.+|++++++++ +++++|++++|+||||.+++.+++.++++. .++++|+|++|.--... .+ +......+++.
T Consensus 131 ~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~r 209 (351)
T PRK01688 131 NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILR 209 (351)
T ss_pred CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEe
Confidence 8899999999988 588999999999999999997777776653 26889999998632210 11 12234668889
Q ss_pred cCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC---
Q 017640 267 SSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG--- 341 (368)
Q Consensus 267 s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g--- 341 (368)
|+||.||.+| +||+++++++++.+......+ ..+.....++..++ ...+
T Consensus 210 SfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~-----------------------~v~~~~~~~a~~~L---~~~~~~~ 263 (351)
T PRK01688 210 TLSKAFALAGLRCGFTLANEEVINLLLKVIAPY-----------------------PLSTPVADIAAQAL---SPQGIAA 263 (351)
T ss_pred cchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC-----------------------CCCHHHHHHHHHHH---hcchHHH
Confidence 9999999999 799999999988776543211 22233233333333 3222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 342 MQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
++...++..+.++++.+.|.++.++
T Consensus 264 ~~~~~~~~~~~r~~l~~~L~~~~~~ 288 (351)
T PRK01688 264 MRERVAEINANRQWLIAALKEIPCV 288 (351)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3444555666778888888877554
No 110
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=3.3e-24 Score=202.80 Aligned_cols=254 Identities=13% Similarity=0.133 Sum_probs=179.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHh---hccCCCCcchhhHHHHHHHHHHHHHHHHHcC--------CCCCCcEEE
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAY---NSNVHRGIHFLSAKATDEYELARKKVAAFIN--------ASDSGEIVF 134 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--------~~~~~~v~~ 134 (368)
+++.|+.+.+. ++|+.+.+++.+.+... ..++. ....++|++++++++ +++ ++|++
T Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-----------~G~~~Lr~aia~~~~~~~~~~~~v~~-~~I~i 96 (374)
T PRK02610 29 QLDRLDTNEFPYDLPPDLKQKLAWLYQQGIESNRYPD-----------GGHEALKQAIAEYVNESAAGSSQITP-ANISV 96 (374)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhcccccCCCC-----------CchHHHHHHHHHHhCccccccCCCCH-HHEEE
Confidence 47889998887 68889999998876542 11221 123478999999987 444 48999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCC-EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcc----cC
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLS----RK 208 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~----~~ 208 (368)
|+|+++++..++.++ +.+|| .|++.+|.|+. +...++..|++++.++.++ ++.+|+++|+++++ .+
T Consensus 97 t~Ga~~al~~~~~~~----~~~g~~~Vlv~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 97 GNGSDELIRSLLIAT----CLGGEGSILVAEPTFSM----YGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPP 168 (374)
T ss_pred cCChHHHHHHHHHHH----cCCCCCeEEEcCCChHH----HHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCC
Confidence 999999999888776 56775 89999996665 5666777899999999875 47899999999886 47
Q ss_pred ceEEEEcccccccccccCHHHHHHHHH-hcCCEEEEecCCcCCc--ccc-cCCCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSH-DVGAKVLVDACQSVPH--MVV-DVQGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~-~~g~~li~D~a~~~~~--~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+++|++++|+||||.+++.+++.++.+ .++++||+|++|..-. ..+ .+......+++.|+||.||.+| +||++.
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~ 248 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELAQHPNWVILRTFSKAFRLAAHRVGYAIG 248 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHhcCCCEEEEEecchhccCcccceeeeec
Confidence 899999999999999999766655543 2589999999987321 111 1222234578899999999888 999999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+......+ +.+.....++..+++..+.. .+.+++..+ ..+.+.+.|++
T Consensus 249 ~~~l~~~l~~~~~~~-----------------------~~~~~~q~a~~~~l~~~~~~-~~~~~~~~~-~r~~l~~~L~~ 303 (374)
T PRK02610 249 HPELIAVLEKVRLPY-----------------------NLPSFSQLAAQLALEHRQEL-LAAIPEILQ-ERDRLYQALQE 303 (374)
T ss_pred CHHHHHHHHHhcCCC-----------------------CCCHHHHHHHHHHhcCHHHH-HHHHHHHHH-HHHHHHHHHHh
Confidence 998887765433111 23444555555665543322 233333333 35556667765
Q ss_pred hcC
Q 017640 363 RHN 365 (368)
Q Consensus 363 ~~g 365 (368)
.++
T Consensus 304 ~~~ 306 (374)
T PRK02610 304 LPQ 306 (374)
T ss_pred CCC
Confidence 544
No 111
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=7.4e-24 Score=201.40 Aligned_cols=262 Identities=16% Similarity=0.141 Sum_probs=184.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t 139 (368)
.+.+.|..+... .+++.+.+++.+.+... ....+.. .....++|+++++++ |.. .+++|++|+|++
T Consensus 29 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Y~~----~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~ 100 (386)
T PRK07550 29 GPLIDLSQAVPGYPPPPELLRALAEAAADP----AAHLYGP----VEGLPELREAYAAHYSRLYGAAISPEQVHITSGCN 100 (386)
T ss_pred CCeEEeCCCCCCCCCCHHHHHHHHHHHhCc----CCcCCCC----CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcH
Confidence 567888888866 45777878777665321 1111111 112235555555555 432 235999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++..++.++ +++||+|++.+|.|.... ..++..|++++.++.++ ++.+|++++++++++++++|++++|
T Consensus 101 ~al~~~~~~l----~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P 172 (386)
T PRK07550 101 QAFWAAMVTL----AGAGDEVILPLPWYFNHK----MWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTP 172 (386)
T ss_pred HHHHHHHHHh----cCCCCEEEEcCCCCcchH----HHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCC
Confidence 9999999988 789999999999887754 34456799999999974 3567999999999989999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccccC---CC-CCccEEEecCcCcCCCCc--ceEEEEcc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDV---QG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~~~---~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~ 284 (368)
+||||.++| +++|.++|++||+++|+|++|+... .+... .. ....+++.|+||.+|.+| +||+++++
T Consensus 173 ~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~ 252 (386)
T PRK07550 173 NNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP 252 (386)
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH
Confidence 999999998 7899999999999999999986321 11111 11 134678899999998677 99999998
Q ss_pred cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 285 ~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
++++.+....... ..+++..+..++..+++.+++. .+..+++..+..+++.+.|.++.
T Consensus 253 ~~~~~~~~~~~~~---------------------~~~~s~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~ 310 (386)
T PRK07550 253 ARIAEIEKFMDTV---------------------AICAPRIGQIAVAWGLPNLADW-RAGNRAEIARRRDAFRAVFARLP 310 (386)
T ss_pred HHHHHHHHHHhhc---------------------ccCCCcHHHHHHHHHhccHHHH-HHHHHHHHHHHHHHHHHHHHhCC
Confidence 8877766443211 1134555555566666543332 45556677777778888887653
Q ss_pred C
Q 017640 365 N 365 (368)
Q Consensus 365 g 365 (368)
+
T Consensus 311 ~ 311 (386)
T PRK07550 311 G 311 (386)
T ss_pred C
Confidence 3
No 112
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.93 E-value=4.4e-24 Score=203.95 Aligned_cols=264 Identities=15% Similarity=0.166 Sum_probs=187.6
Q ss_pred CCCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcEEE
Q 017640 65 SKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVF 134 (368)
Q Consensus 65 ~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~ 134 (368)
+.+++.|+.+.++ ++++.+.+++.+.+.....+. +.......++|+.++++++.. .+++|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~--------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~ 101 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNG--------YAPSVGALAAREAVAEYLSSDLPGKLTADDVVL 101 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCC--------CCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEE
Confidence 4678999999763 677889998888775321111 111233457899999999852 2348999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEE
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (368)
|+|+|+|+.+++.++ .++||+|++++|+|.. +...++..|++++.+++++ ++.+|++.+++++.++++++
T Consensus 102 t~G~t~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 102 TSGCSQAIEICIEAL----ANPGANILVPRPGFPL----YDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred ecChHHHHHHHHHHh----CCCCCEEEEeCCCchh----HHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 999999999999998 6899999999998765 4555677799999998753 46789999999998889999
Q ss_pred EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++++||||.+++ +++|.++|+++|+++|+|++|..-.. ++ .+......++++|+||.|+.+| +||+
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 253 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWRLGWI 253 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcceEEEE
Confidence 99999999999998 78999999999999999999873211 11 1222234688899999998888 9999
Q ss_pred EEcc--c-----ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 281 FGKS--D-----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 281 ~~~~--~-----li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
++.+ + +++.+..... . ...++...+.++..+++...+.-+++.+++..+..
T Consensus 254 v~~~~~~~~~~~~~~~~~~~~~---------------------~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 311 (403)
T TIGR01265 254 IIHDPHGIFRDTVLQGLKNLLQ---------------------R-ILGPATIVQGALPDILENTPQEFFDGKISVLKSNA 311 (403)
T ss_pred EEeCchhhhHHHHHHHHHHHhh---------------------h-hcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 8842 2 2222221110 0 01234445555555554211112455666677777
Q ss_pred HHHHHHHHhhcCC
Q 017640 354 ICSIIVIQERHNT 366 (368)
Q Consensus 354 ~~l~~~l~~~~g~ 366 (368)
+++.+.|++++|+
T Consensus 312 ~~l~~~L~~~~~~ 324 (403)
T TIGR01265 312 ELCYEELKDIPGL 324 (403)
T ss_pred HHHHHHHhcCCCc
Confidence 7888888766553
No 113
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=4.8e-24 Score=201.38 Aligned_cols=252 Identities=12% Similarity=0.077 Sum_probs=185.0
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHh----hccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEe
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAY----NSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFT 135 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t 135 (368)
..+.|+.+.+. ++|+.+.+++.+.+... ..+|. .....+|+++++++ | .++ ++|++|
T Consensus 27 ~~i~l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y~~-----------~g~~~lr~aia~~~~~~~~~~~~~-~~I~it 94 (368)
T PRK03317 27 VPVRLNTNENPYPPSPALVADIAEAVAEAAAGLNRYPD-----------RDAVALRADLAAYLTAQTGVGLTV-ENVWAA 94 (368)
T ss_pred ceeEecCCCCCCCCCHHHHHHHHHHHhhhhhhhccCCC-----------CchHHHHHHHHHHhhhhccCCCCh-hhEEEC
Confidence 45788888876 68889999998876532 11221 12346888888888 4 334 499999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVI 214 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~ 214 (368)
+|+++++.+++.++ +++||.|++..|.|+. +...++..|.+++.++.++++.+|++++++++.. ++++|++
T Consensus 95 ~G~~~~l~~~~~~~----~~~gd~v~v~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l 166 (368)
T PRK03317 95 NGSNEILQQLLQAF----GGPGRTALGFVPSYSM----HPIIARGTHTEWVEGPRAADFTLDVDAAVAAIAEHRPDVVFL 166 (368)
T ss_pred CCHHHHHHHHHHHh----cCCCCEEEEeCCChHH----HHHHHHhcCCeeEEcccCCCCCCCHHHHHHHHhccCCCEEEE
Confidence 99999999999998 8999999999997766 4556667799998888777788999999999864 7789999
Q ss_pred cccccccccccCHHHHHHHHHhcCCEEEEecCCcCCc----c-cccC-CCCCccEEEecCcCcCCCCc--ceEEEEcccc
Q 017640 215 HHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH----M-VVDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 215 ~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~----~-~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
++++||||.+++.+++.++++.+++++|+|++|+.-. . .... ......+++.|++|.+|.+| +||+++++++
T Consensus 167 ~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~ 246 (368)
T PRK03317 167 TSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAPAV 246 (368)
T ss_pred eCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCHHH
Confidence 9999999999999999999999999999999998321 1 0111 11234578889999999778 8999999998
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++.+...... ...+..+..++..+++.... .....++..+..+++.+.|++.
T Consensus 247 ~~~l~~~~~~-----------------------~~~s~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 298 (368)
T PRK03317 247 VDALRLVRLP-----------------------YHLSAVTQAAARAALRHADE--LLASVAALRAERDRVVAWLREL 298 (368)
T ss_pred HHHHHhcCCC-----------------------CCCCHHHHHHHHHHhhCHHH--HHHHHHHHHHHHHHHHHHHHHC
Confidence 8776633211 13344555556666654332 2233344556666677777654
No 114
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.93 E-value=6.4e-25 Score=200.73 Aligned_cols=221 Identities=19% Similarity=0.189 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
...++++++.+|+++|++ +.+++++|+|+++..++.++ +++||+|++..++|.++...+. ..|+++++++
T Consensus 58 ~g~i~~~~~~~A~~~ga~--~~~~~~~Gst~a~~~~l~al----~~~gd~Vlv~~~~h~s~~~~~~----~~g~~~~~v~ 127 (294)
T cd00615 58 TGPIKEAQELAARAFGAK--HTFFLVNGTSSSNKAVILAV----CGPGDKILIDRNCHKSVINGLV----LSGAVPVYLK 127 (294)
T ss_pred ChHHHHHHHHHHHHhCCC--CEEEEcCcHHHHHHHHHHHc----CCCCCEEEEeCCchHHHHHHHH----HCCCEEEEec
Confidence 345778999999999986 25566999999999999988 8999999999999999765543 4599999988
Q ss_pred CCCC------CCCCHHHHHHhcc--cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCC-----cccccC
Q 017640 190 LNDD------ESPDLDKLKEMLS--RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVP-----HMVVDV 256 (368)
Q Consensus 190 ~~~~------~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~-----~~~~~~ 256 (368)
.+.+ +.+|++.++++++ +++++|+++++ |++|.++|+++|.++|+++|+++++|++|+.. ..+.+.
T Consensus 128 ~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~ 206 (294)
T cd00615 128 PERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSA 206 (294)
T ss_pred CccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcch
Confidence 7633 3789999999996 46799999988 78999999999999999999999999999852 233334
Q ss_pred CCCCccEEEecCcCcCC-CCcceEEEEccccccc--CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 017640 257 QGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSA--MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAA 333 (368)
Q Consensus 257 ~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~--l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~a 333 (368)
...+.|+++.|+||+++ +.++|++.++++..+. +... ...++.++|+++.++++..+
T Consensus 207 ~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~--------------------~~~~~ttsps~~~~asl~~a 266 (294)
T cd00615 207 AMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEA--------------------LNLHQSTSPSYLILASLDVA 266 (294)
T ss_pred hhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHH--------------------HHHHCCCCcHHHHHHHHHHH
Confidence 44589999999999765 4557888777663221 1111 13456779999999999999
Q ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 334 IDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 334 l~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++...|.+ ..++..+++++++++|.+
T Consensus 267 ~~~~~~~g~~-~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 267 RAMMALEGKE-LVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHhHH-HHHHHHHHHHHHHHHHhC
Confidence 9999877755 567788888888887753
No 115
>PLN02452 phosphoserine transaminase
Probab=99.93 E-value=4.7e-24 Score=198.78 Aligned_cols=274 Identities=17% Similarity=0.191 Sum_probs=209.7
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCC--CCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CCHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVH--RGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINL 144 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t-~g~t~a~~~ 144 (368)
.+|+-..++..+|+.|++++++.+..+..... ......+..+.+.++++++.|.++++.+++++|+|. .|+|.++.+
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea 86 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAA 86 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHH
Confidence 35666777888999999999987765432211 113344566789999999999999999765666555 888999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCC---CCCHHHHHHhcccCceEEEEccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE---SPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~---~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
++..+ +.+|+++++...+..+-. +...++++|...+.....+.. .+++++++ ..++.+.|.+++..+.|
T Consensus 87 ~~~nl----~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETst 158 (365)
T PLN02452 87 IPLNL----CKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIH 158 (365)
T ss_pred HHHhc----CCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCC
Confidence 99988 889999888887777754 667778888744444222222 45666653 24568999999999999
Q ss_pred ccc-cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcce
Q 017640 222 ASI-LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMI 300 (368)
Q Consensus 222 G~~-~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~ 300 (368)
|+. .|++++. ++++++|++++++..++|++++++|+ +|.||.+||+|+|++++++++++++.+....
T Consensus 159 Gv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saqK~lGP~Gl~~v~vr~~~l~~~~~~~~~---- 226 (365)
T PLN02452 159 GVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQKNVGPSGVTIVIIRKDLIGNARPITPG---- 226 (365)
T ss_pred cEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--EecccccCCCCeEEEEEcHHHHhhcccCCCc----
Confidence 996 6677664 28999999999999999999887755 6999999999999999999999877643221
Q ss_pred eecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 301 SDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..... .....+|||+..++++..+++++.+. |++.+.+|.+++++++++.|.+.+|+
T Consensus 227 ---~~~~~~~~~--~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~ 288 (365)
T PLN02452 227 ---MLDYKIHAE--NDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGF 288 (365)
T ss_pred ---hhhHHHHHh--cCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 111111001 11234699999999999999999987 89999999999999999999988765
No 116
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=7.9e-24 Score=199.30 Aligned_cols=253 Identities=16% Similarity=0.099 Sum_probs=184.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+++.|+.+... .+|+.+.+++.+.+.....++.. . ..++|+++|++++.+++ +|++|+|+++++.+
T Consensus 22 ~~~i~l~~~~n~~~~~~~~~~a~~~~~~~~~~Y~~~----------~-~~~Lr~aia~~~~v~~~-~I~it~G~~~~i~~ 89 (360)
T PRK07392 22 DAILDFSASINPLGPPESVIAAIQSALSALRHYPDP----------D-YRELRLALAQHHQLPPE-WILPGNGAAELLTW 89 (360)
T ss_pred ccEEEeCCcCCCCCCCHHHHHHHHHHHHHhhcCCCc----------C-HHHHHHHHHHHhCcChh-hEEECCCHHHHHHH
Confidence 457899988665 67889999988776653323221 1 23799999999998775 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCC-----CCHHHHHHhcccCceEEEEccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDES-----PDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~-----~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
++.++ . +||.|++.+|.|+. +...++..|++++.++.++++. .+++.+++.. ++++++++++|+|
T Consensus 90 ~~~~l----~-~g~~vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~N 159 (360)
T PRK07392 90 AGREL----A-QLRAVYLITPAFGD----YRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHN 159 (360)
T ss_pred HHHHh----C-CCCeEEEECCCcHH----HHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCC
Confidence 99876 3 57899999997766 5666677799999999975532 4677776654 4679999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----c-cc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----V-VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAM 290 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~-~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l 290 (368)
|||.+++.++|.++++++++ +|+|++|..-.. + +. +......+++.|+||.||.+| +||+++++++++.+
T Consensus 160 PTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~ 238 (360)
T PRK07392 160 PTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW 238 (360)
T ss_pred CCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHH
Confidence 99999999999999999985 666999873211 1 11 122245689999999999888 99999999887765
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..... ..+.+.....++..+++... -.+.++++.++..+++.+.|++++|+
T Consensus 239 ~~~~~-----------------------~~~~s~~~q~~~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~~~~ 289 (360)
T PRK07392 239 QQWRD-----------------------PWPVNGLAAAAAIAALADRD--FQQQTWAWLPPAREALFQGLASLPGL 289 (360)
T ss_pred HhhCC-----------------------CCCCCHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 43221 12455566666666654211 13344556677777888888776553
No 117
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.93 E-value=7.8e-24 Score=202.15 Aligned_cols=266 Identities=15% Similarity=0.110 Sum_probs=187.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~ 143 (368)
++++.|+.+... +.++.+.+++.+.+.... ..+....+..+..+.+.+.+++.+|.+ .+++|++|+|+++|+.
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~-----~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~ 107 (402)
T PRK06107 33 RSIVDLTVGEPDFDTPDHIKQAAVAAIERGE-----TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIF 107 (402)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHHcCC-----CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 567889888877 457788888887775310 011111122444555666666666764 3358999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
.++.++ +++||.|++++|.|+... ......+.+++.++.+. ++.+|++++++++.++++++++++++|||
T Consensus 108 ~~~~~~----~~~gd~vl~~~p~y~~y~----~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPt 179 (402)
T PRK06107 108 LALMAT----LEAGDEVIIPAPYWVSYP----DMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPT 179 (402)
T ss_pred HHHHHh----cCCCCEEEEecCCCcCHH----HHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCC
Confidence 999887 899999999999887643 23344577888888753 35689999999998889999999999999
Q ss_pred ccccC---HHHHHHHHHhc-CCEEEEecCCcCCc------ccc-cC--CCCCccEEEecCcCcCCCCc--ceEEEEcccc
Q 017640 222 ASILP---IEEIVHWSHDV-GAKVLVDACQSVPH------MVV-DV--QGLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 222 G~~~~---l~~i~~l~~~~-g~~li~D~a~~~~~------~~~-~~--~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
|.++| +++|+++|++| |+++|+|++|+.-. ..+ .+ ...+..++++|+||.||.+| +||+++++++
T Consensus 180 G~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~ 259 (402)
T PRK06107 180 GAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADL 259 (402)
T ss_pred CcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHH
Confidence 99998 56778889998 99999999986211 111 11 11246788899999999888 8999999998
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
++.+.....- ...+++.....++..+++--.. -++..+++.++..+++.+.|+++.|.
T Consensus 260 ~~~~~~~~~~---------------------~~~~~s~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~~~g~ 317 (402)
T PRK06107 260 IAAINKLQSQ---------------------SSSCPSSISQAAAAAALNGDQS-FVTESVAVYKQRRDYALALLNAIPGL 317 (402)
T ss_pred HHHHHHHHHh---------------------cccCCChHHHHHHHHHhcCChH-HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 8876644321 1124555566666666542111 24555666777777888888765453
No 118
>PRK07908 hypothetical protein; Provisional
Probab=99.93 E-value=9.9e-24 Score=197.84 Aligned_cols=250 Identities=15% Similarity=0.125 Sum_probs=180.6
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++++.|+.+.+. .+|+.+++++.+.+.....++. .....++|++++++++.+++ +|++|+|+++++.+
T Consensus 22 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~----------~~g~~~lr~aia~~~~~~~~-~I~it~Ga~~al~~ 90 (349)
T PRK07908 22 PGLLDFAVNVRHDTPPEWLRERLAARLGDLAAYPS----------TEDERRARAAVAARHGRTPD-EVLLLAGAAEGFAL 90 (349)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHhhHhhcCCC----------ccchHHHHHHHHHHhCcChh-hEEECCCHHHHHHH
Confidence 678899998876 5788899999888765433332 12344799999999998764 99999999999998
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++. + ++| .+++..|+|.. +...++..|++++.++.++++.+|++.+ .++++++++++++||||.+
T Consensus 91 ~~~-l-----~~~-~viv~~P~y~~----~~~~~~~~G~~i~~v~~~~~~~~d~~~l----~~~~~~i~l~np~NPTG~~ 155 (349)
T PRK07908 91 LAR-L-----RPR-RAAVVHPSFTE----PEAALRAAGIPVHRVVLDPPFRLDPAAV----PDDADLVVIGNPTNPTSVL 155 (349)
T ss_pred HHh-c-----CCC-eEEEeCCCChH----HHHHHHHcCCEEEeeccCcccCcChhHh----ccCCCEEEEcCCCCCCCCC
Confidence 887 4 354 56667887665 3445677899999999987778888754 4578999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcC--CcccccCC--CCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCCc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSV--PHMVVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGE 298 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~--~~~~~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~ 298 (368)
+|.++|.++|++ +.++|+|++|+. ...+.++. ..+..+++.|+||.+|++| +||+++++++++.+.+....+
T Consensus 156 ~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~- 233 (349)
T PRK07908 156 HPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW- 233 (349)
T ss_pred cCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEEEEeecccccCCccceeeeeecCHHHHHHHHhcCCCC-
Confidence 999999999964 778889999862 11112221 2234577889999999888 799999999888776543211
Q ss_pred ceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+.+...+.++...++-....-++.++++..+..+++.+.|.++ |+
T Consensus 234 ----------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~ 278 (349)
T PRK07908 234 ----------------------PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GA 278 (349)
T ss_pred ----------------------CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-Cc
Confidence 2233333333333320000124567788888888888888875 43
No 119
>PRK07777 aminotransferase; Validated
Probab=99.93 E-value=1e-23 Score=200.53 Aligned_cols=259 Identities=20% Similarity=0.170 Sum_probs=180.6
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHH----HcCCC--CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAA----FINAS--DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~----~~~~~--~~~~v~~t~g~ 138 (368)
.+.+.|..+... ..++.+.+++.+.+... . ..+... ....++|+.+++ .+|.+ ++++|++|+|+
T Consensus 24 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~---~--~~Y~~~----~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~ 94 (387)
T PRK07777 24 TGAVNLGQGFPDEDGPPEMLEAAQEAIAGG---V--NQYPPG----PGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGA 94 (387)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcC---C--CCCCCC----CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCc
Confidence 456888887765 34566677766655421 0 111111 112345555555 45664 22379999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC---CCCCHHHHHHhcccCceEEEEc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
++|+..++.++ +++||+|++..|.|+.. ...++..|.+++.++.+++ +.+|+++|++++.+++++|+++
T Consensus 95 ~~al~~~~~~~----~~~gd~vli~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~ 166 (387)
T PRK07777 95 TEAIAAAVLGL----VEPGDEVLLIEPYYDSY----AAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVN 166 (387)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCchhh----HHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEc
Confidence 99999999887 78999999999988774 4455667999999998754 5689999999998889999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------cccc-CCC-CCccEEEecCcCcCCCCc--ceEEEE
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVVD-VQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~~-~~~-~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+++||||.+++ +++|.++|++|++++|+|++|.... .++. +.. .+.++++.|+||.||.+| +||+++
T Consensus 167 ~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~ 246 (387)
T PRK07777 167 SPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACG 246 (387)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEec
Confidence 99999999998 7788999999999999999986311 1221 121 347899999999999778 899999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+....... .+ +.+.+...++..+++.... -++.++++.++..+++.+.|.+
T Consensus 247 ~~~l~~~~~~~~~~~------------------~~---~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 304 (387)
T PRK07777 247 PAPLIAAVRAAKQYL------------------TY---VGGAPFQPAVAHALDHEDA-WVAALRDSLQAKRDRLAAGLAE 304 (387)
T ss_pred CHHHHHHHHHHHhhc------------------cc---CCCCHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 998877665332100 00 1222233334444432222 2456677788888888888877
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 305 ~ 305 (387)
T PRK07777 305 A 305 (387)
T ss_pred C
Confidence 4
No 120
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.93 E-value=1.2e-23 Score=200.14 Aligned_cols=259 Identities=17% Similarity=0.146 Sum_probs=182.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g~ 138 (368)
++++.|..+... ..++.+.+++.+.+.... . .+.. .....++|+++++++ +.. ++++|++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~-~----~Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~ 100 (391)
T PRK07309 30 PGILKLTLGEPDFTTPDHVKEAAKRAIDANQ-S----HYTG----MAGLLELRQAAADFVKEKYNLDYAPENEILVTIGA 100 (391)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhcCC-C----CCCC----CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 467889888777 456777888877665311 0 0100 111335666666665 332 23589999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhccc---CceEEEE
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSR---KTKLVVI 214 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~---~~~~v~~ 214 (368)
++++.+++.++ +++||+|++.+|.|... ...++..|.+++.++.+++ +.+|++.++++++. +++++++
T Consensus 101 ~~al~~~~~~~----~~~gd~vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l 172 (391)
T PRK07309 101 TEALSASLTAI----LEPGDKVLLPAPAYPGY----EPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVIL 172 (391)
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCCcch----HHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEE
Confidence 99999999988 88999999999988884 4455667999999998654 57899999999864 5799999
Q ss_pred cccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccCC--CCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 215 HHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 215 ~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
++|+||||.+++ +++|.++|++||+++|+|++|..-.. ..++. ..+..+++.|+||.||.+| +||++.+
T Consensus 173 ~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~ 252 (391)
T PRK07309 173 NYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP 252 (391)
T ss_pred ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC
Confidence 999999999998 78889999999999999999873221 11111 1245689999999999888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+..... +...+++...+.++..+++..... ....+++..+..+++.+.|.+.
T Consensus 253 ~~~~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 310 (391)
T PRK07309 253 AEFTAQLIKSHQ---------------------YLVTAATTMAQFAAVEALTNGKDD-ALPMKKEYIKRRDYIIEKMTDL 310 (391)
T ss_pred HHHHHHHHHHHh---------------------hcccCCChHHHHHHHHHHhCChhH-HHHHHHHHHHHHHHHHHHHHHC
Confidence 998877663321 111134444555555555421111 2345566666777777777664
No 121
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=198.22 Aligned_cols=207 Identities=16% Similarity=0.194 Sum_probs=160.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+++.|+.+... .+++.+.+++.+.+.....++.. ...++|++++++++.+++ +|++|+|+++++.+
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-----------~~~~lr~~ia~~~~~~~~-~I~it~G~~~al~~ 97 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAERVHSYPKA-----------SHADLTAALADRWDVSPE-QVWLANGGDGALDY 97 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhhhhcCCCC-----------CHHHHHHHHHHHhCCCcc-eEEECCCHHHHHHH
Confidence 568999998776 67788889888776654333321 133799999999998775 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
++.++ +++||.|++.+|.|+. +...++..|.+++.++++. ++.+|++.+++.. +++++|++++++||||
T Consensus 98 ~~~~~----~~~gd~V~v~~P~y~~----~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG 168 (357)
T PRK14809 98 LARAM----LDPGDTVLVPDPGFAY----YGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTG 168 (357)
T ss_pred HHHHh----cCCCCEEEEeCCChHH----HHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCC
Confidence 99988 8999999999997764 3444566789999998863 3667888887765 4679999999999999
Q ss_pred cccCHHHHHHHHHhc--CCEEEEecCCcCCcc---cc-cCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 223 SILPIEEIVHWSHDV--GAKVLVDACQSVPHM---VV-DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~--g~~li~D~a~~~~~~---~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
.++|.+++.++++.. +++||+|++|..-.. .+ .....+..+++.|+||.||.+| +||+++++++++.+...
T Consensus 169 ~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~ 247 (357)
T PRK14809 169 SEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARV 247 (357)
T ss_pred cCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHHHHHHHh
Confidence 999977777776643 789999999873211 11 1122345688999999999888 99999999988776543
No 122
>PLN02368 alanine transaminase
Probab=99.93 E-value=7.6e-24 Score=201.06 Aligned_cols=225 Identities=16% Similarity=0.148 Sum_probs=166.3
Q ss_pred HHHHHHHHHHHc----CCC-CCCcEEEeCCHHHHHHHHHHHccCCCC-CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEE
Q 017640 113 YELARKKVAAFI----NAS-DSGEIVFTKNATEAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (368)
Q Consensus 113 ~~~~r~~la~~~----~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 186 (368)
..++|+++++++ |.+ .+++|++|+|+++++..++.++ + ++||+|++++|.|+. +...++..|++++
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l----~~~pGd~Vli~~P~Y~~----y~~~~~~~g~~~v 180 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAV----IRGEKDGVLVPVPQYPL----YSATISLLGGTLV 180 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHH----cCCCCCEEEEeCCCCcc----HHHHHHHcCCEEE
Confidence 346777777766 543 3359999999999999999988 6 799999999998887 4455566799999
Q ss_pred EEeCCCC--CCCCHHHHHHhccc------CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----
Q 017640 187 FLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH---- 251 (368)
Q Consensus 187 ~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~---- 251 (368)
.++++++ +.+|++.|++++++ +++++++++|+||||.+++ +++|+++|++||++||+|++|..-.
T Consensus 181 ~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~ 260 (407)
T PLN02368 181 PYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDE 260 (407)
T ss_pred EEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 9998753 78899999999864 6899999999999999999 6788889999999999999987321
Q ss_pred ---ccc-c----CC----CCCccEEEecCcCcC-CCCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCC
Q 017640 252 ---MVV-D----VQ----GLDADFLVASSHKMC-GPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADP 313 (368)
Q Consensus 252 ---~~~-~----~~----~~~~d~~~~s~~K~~-g~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~ 313 (368)
.++ . +. ..+..+++.|+||.| |.+| +||+++ ++++++.+.....
T Consensus 261 ~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~------------------ 322 (407)
T PLN02368 261 RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVAS------------------ 322 (407)
T ss_pred CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhc------------------
Confidence 110 1 11 122568889999987 8888 999985 7777776654321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH-------HH--hCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 314 PSRFEAGTPAIGEAIGLGAAIDYL-------ST--IGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 314 ~~~~~~gt~~~~~~~a~~~al~~~-------~~--~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
. ..+.+...+.++..+++-- .. .....+.+..++.++++.+.|.+++|+.
T Consensus 323 ---~-~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 323 ---I-ALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred ---c-cCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 0 1135555666666666411 00 0134566777888889999999887753
No 123
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=1.6e-23 Score=199.07 Aligned_cols=259 Identities=19% Similarity=0.166 Sum_probs=185.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCC-cEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSG-EIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~-~v~~t~g~ 138 (368)
++.+.|+.+... +.++.+.+++.+.+.... ..+. ......++|+.+++++ |.. .++ +|++|+|+
T Consensus 28 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~-----~~Y~----~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~ 98 (387)
T PRK07683 28 DNLISLTIGQPDFPTPSHVKEAAKRAITENY-----TSYT----HNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGA 98 (387)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhcCC-----CCCC----CCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCh
Confidence 567889988766 456788888888776321 0111 0122346777777776 442 234 89999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
++|+.+++.++ +++||.|++++|.|+.. ...++..|+++++++.++ ++.+|.+++++.+.+++++++++++
T Consensus 99 ~~al~~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p 170 (387)
T PRK07683 99 SEAIDIAFRTI----LEPGTEVILPAPIYPGY----EPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYP 170 (387)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCccch----HHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCC
Confidence 99999999988 78999999999988774 444556799999999874 4667889999999888999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cc-cC-CCCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DV-QGLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~-~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
+||||.+++ +++|.++|+++|+++|+|++|..... ++ .. +..+..+++.|+||.+|.+| +||++++++
T Consensus 171 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~ 250 (387)
T PRK07683 171 SNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY 250 (387)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH
Confidence 999999998 78889999999999999999884321 11 11 12245789999999999778 999999998
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+..... +.....+.....++...++.... -.+.++++..+..+++.+.|.+.
T Consensus 251 l~~~~~~~~~---------------------~~~~~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 306 (387)
T PRK07683 251 LAKHILKVHQ---------------------YNVTCASSISQYAALEALTAGKD-DAKMMRHQYKKRRDYVYNRLISM 306 (387)
T ss_pred HHHHHHHHHH---------------------hccCCCChHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 8877653321 11112233333444334432111 24566777778888888888764
No 124
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.93 E-value=1e-23 Score=204.44 Aligned_cols=300 Identities=17% Similarity=0.169 Sum_probs=207.2
Q ss_pred hhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC
Q 017640 48 GHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (368)
Q Consensus 48 ~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~ 127 (368)
.+.++...++.....+ ++ |+++...+ .|..+. .+......++.|. ..+..++...++...+.++++++++..
T Consensus 74 ~~~~~~~~~~~~~~~h--P~--f~g~~~~~-~p~~~~-~l~~l~~~lN~n~--~~~~~spa~t~lE~~v~~wl~~l~~~~ 145 (522)
T TIGR03799 74 QFLLDKLVAHSVHTAS--PS--FIGHMTSA-LPYFML-PLSKLMVALNQNL--VKIETSKAFTPLERQVLGMMHHLVYGQ 145 (522)
T ss_pred HHHHHHHHcCCCCCCC--CC--eEEeccCC-CchHHH-HHHHHHHHhcCCc--ceeecCcchHHHHHHHHHHHHHHhccC
Confidence 3334444555544443 43 45554443 222221 1223333444443 345567778889999999999998521
Q ss_pred ------------CCCcEEEeCCHHHHHHHHHHHccCCCCC----------------------CCCEEEEcCCCCcccHHH
Q 017640 128 ------------DSGEIVFTKNATEAINLVAYSWGLSNLK----------------------SGDEVILTVAEHHSAIVP 173 (368)
Q Consensus 128 ------------~~~~v~~t~g~t~a~~~~~~~~~~~~~~----------------------~gd~vl~~~~~~~s~~~~ 173 (368)
.....++|+|+|+|+..++.+.+...+. ++..|++++.+|+|+.
T Consensus 146 ~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~-- 223 (522)
T TIGR03799 146 DDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLG-- 223 (522)
T ss_pred cccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHH--
Confidence 1124689999999999998875432111 2457899999999954
Q ss_pred HHHHHHHcCC---EEEEEeCCCCCCCCHHHHHHhcc----cCceEEEE--cccccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 174 WQLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLS----RKTKLVVI--HHISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 174 ~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~--~~~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
+.++..|. +++.||+++++.+|+++|+++|+ ++++.+++ +..++.||.+.|+++|+++|+++|+++++|
T Consensus 224 --kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVD 301 (522)
T TIGR03799 224 --KAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVD 301 (522)
T ss_pred --HHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 44556676 79999999999999999999986 34444444 466789999999999999999999999999
Q ss_pred cCCcCCccccc-----CCCC-CccEEEecCcC-cCCCCcceEEEEccc-ccccCCCcccCCcceeecccCCCCCCCCCCC
Q 017640 245 ACQSVPHMVVD-----VQGL-DADFLVASSHK-MCGPTGIGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSR 316 (368)
Q Consensus 245 ~a~~~~~~~~~-----~~~~-~~d~~~~s~~K-~~g~~G~G~l~~~~~-li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (368)
++|+.+....+ +... ++|+++.|+|| +++|.|+|++++++. +.+.+.+.. .+ .... ........+
T Consensus 302 aA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~-~Y-----l~~~-~~~d~~~~~ 374 (522)
T TIGR03799 302 AAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHA-EY-----ILRK-GSKDLGSHT 374 (522)
T ss_pred chhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCc-ch-----hcCC-CCCccccce
Confidence 99997665433 3333 68999999999 678999999999864 434443310 00 0000 000111245
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 017640 317 FEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL 368 (368)
Q Consensus 317 ~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t~ 368 (368)
++. +.+..+ +.+..+++++...|++.+.++..++++++.+.|.+.+++++
T Consensus 375 leg-sR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el 424 (522)
T TIGR03799 375 LEG-SRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFEL 424 (522)
T ss_pred eec-CcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 664 444444 46899999999999999999999999999999999887653
No 125
>PRK09265 aminotransferase AlaT; Validated
Probab=99.93 E-value=2.3e-23 Score=199.15 Aligned_cols=200 Identities=17% Similarity=0.230 Sum_probs=153.9
Q ss_pred CCCeEEeccCCCC----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEE
Q 017640 65 SKKLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVF 134 (368)
Q Consensus 65 ~~~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~ 134 (368)
+++++.|+.+... ++++.+.+++.+.+.....++. .....++|+++++++ ++++ ++|++
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~~~~Y~~----------~~G~~~lr~~ia~~~~~~~~~~~~~-~~i~~ 100 (404)
T PRK09265 32 GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTAQGYSD----------SKGLFSARKAIMQYYQQKGIPDVDV-DDIYI 100 (404)
T ss_pred CCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhcCCCCCC----------CCCcHHHHHHHHHHHhccCCCCCCc-ccEEE
Confidence 3678999987653 3677888888776543222211 122337888899988 5555 49999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEE
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v 212 (368)
|+|+++++.+++.++ +++||+|++++|+|+.. ...++..|++++.++.+. ++.+|++++++++.+++++|
T Consensus 101 t~G~~~~l~~~~~~~----~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v 172 (404)
T PRK09265 101 GNGVSELIVMAMQAL----LNNGDEVLVPAPDYPLW----TAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKAI 172 (404)
T ss_pred eCChHHHHHHHHHHh----CCCCCEEEEeCCCCcCh----HHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceEE
Confidence 999999999999988 89999999999999874 444555688998888763 46789999999998889999
Q ss_pred EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----c--cc-cCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M--VV-DVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~--~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++|+||||.++| +++|.++|++||+++|+|++|..-. . ++ .+......+++.|++|.||.+| +||+
T Consensus 173 ~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~ 252 (404)
T PRK09265 173 VIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWM 252 (404)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEE
Confidence 99999999999999 8899999999999999999986211 1 11 1111123567889999999888 8999
Q ss_pred EEc
Q 017640 281 FGK 283 (368)
Q Consensus 281 ~~~ 283 (368)
+.+
T Consensus 253 v~~ 255 (404)
T PRK09265 253 VLS 255 (404)
T ss_pred EEe
Confidence 963
No 126
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.93 E-value=8.2e-24 Score=205.64 Aligned_cols=209 Identities=17% Similarity=0.195 Sum_probs=151.6
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHH-------hhccCCCCcchhhHHHHHHHHHHHHHHHHHcC--------CCCCC
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEA-------YNSNVHRGIHFLSAKATDEYELARKKVAAFIN--------ASDSG 130 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--------~~~~~ 130 (368)
.++|.|+.+.+..+.+.+.+.+.+.... ....++... +.......++|+++|++++ .++ +
T Consensus 46 ~g~i~l~~aEN~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p-e 120 (496)
T PLN02376 46 HGIIQMGLAENQLCLDLIKDWVKENPEASICTLEGIHQFSDIAN----FQDYHGLKKFRQAIAHFMGKARGGKVTFDP-E 120 (496)
T ss_pred CceEEeecchhhhhHHHHHHHHHhCchhhccccccccccchhhc----cCCCCCcHHHHHHHHHHHHHHhCCCCcCCh-h
Confidence 6899999999887767666666654332 111111111 1112233467777777765 344 4
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcc--
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLS-- 206 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~-- 206 (368)
+|++|+|+++++.+++.++ ++|||.|++++|.|+.....+. ...|++++.|+++ .++.+|++.+++++.
T Consensus 121 ~Ivit~Ga~~al~~l~~~l----~~pGD~Vlv~~P~Y~~~~~~~~---~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a 193 (496)
T PLN02376 121 RVVMSGGATGANETIMFCL----ADPGDVFLIPSPYYAAFDRDLR---WRTGVEIIPVPCSSSDNFKLTVDAADWAYKKA 193 (496)
T ss_pred hEEEccchHHHHHHHHHHh----CCCCCEEEECCCCccchHHHHH---hhCCCEEEEEeCCCCccCcCCHHHHHHHHHHH
Confidence 9999999999999999998 8999999999999888543222 2469999999996 347889999976542
Q ss_pred ----cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cC-CC-------CCccEE
Q 017640 207 ----RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DV-QG-------LDADFL 264 (368)
Q Consensus 207 ----~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~-~~-------~~~d~~ 264 (368)
.++++|++++|+||||.+++ +++|+++|++||++||+|++|+.-.. ++ .+ .. .+..++
T Consensus 194 ~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~v 273 (496)
T PLN02376 194 QESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHI 273 (496)
T ss_pred HhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEE
Confidence 36899999999999999999 67888899999999999999984221 11 11 10 012356
Q ss_pred EecCcCcCCCCc--ceEEEEcccc
Q 017640 265 VASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 265 ~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
+.|+||.||.+| +||++.+++.
T Consensus 274 v~S~SK~~glpGlRvG~li~~~~~ 297 (496)
T PLN02376 274 VYSLSKDMGLPGFRVGIVYSFNDS 297 (496)
T ss_pred EEeccccCCCCcceEEEEEECCHH
Confidence 789999999888 9999986543
No 127
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=8.6e-24 Score=204.69 Aligned_cols=267 Identities=15% Similarity=0.117 Sum_probs=178.8
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhh-ccCC--CCcchhhHHHHHHHHHHHHHHHHHcC--------CCCCCcEEE
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYN-SNVH--RGIHFLSAKATDEYELARKKVAAFIN--------ASDSGEIVF 134 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~r~~la~~~~--------~~~~~~v~~ 134 (368)
.++|.|+.+.+..+.+.+.+.+.+...... .... .......+.......++|+++|++++ +++ ++|++
T Consensus 38 ~g~i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~-~~Iii 116 (468)
T PLN02450 38 SGIIQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP-NKLVL 116 (468)
T ss_pred CeeEEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh-HHeEE
Confidence 689999999988777666666654322100 0000 00000001111223467777777774 234 58999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhccc-----
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR----- 207 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~----- 207 (368)
|+|+++++.+++.++ +++||.|++++|.|+.....+. ...|++++.|+++ .++.+|++.+++++.+
T Consensus 117 t~Ga~~al~~l~~~l----~~pGd~Vlv~~P~Y~~~~~~~~---~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~ 189 (468)
T PLN02450 117 TAGATSANETLMFCL----AEPGDAFLLPTPYYPGFDRDLK---WRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLN 189 (468)
T ss_pred ccChHHHHHHHHHHh----CCCCCEEEECCCCCCchHHHHh---hcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 999999999999998 8999999999998888543222 1469999999986 3467788999988754
Q ss_pred -CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------c-ccC---------CCCCccEEEec
Q 017640 208 -KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------V-VDV---------QGLDADFLVAS 267 (368)
Q Consensus 208 -~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~-~~~---------~~~~~d~~~~s 267 (368)
++++|++++|+||||.+++ +++|.++|++||++||+|++|+.-.. + +.. +..+..+++.|
T Consensus 190 ~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S 269 (468)
T PLN02450 190 LKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYS 269 (468)
T ss_pred CCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEe
Confidence 7899999999999999999 67888899999999999999983111 1 111 12346789999
Q ss_pred CcCcCCCCc--ceEEEEcccc-cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--HhCH
Q 017640 268 SHKMCGPTG--IGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS--TIGM 342 (368)
Q Consensus 268 ~~K~~g~~G--~G~l~~~~~l-i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~--~~g~ 342 (368)
+||.||.+| +||++++++. ++.+.... .+ +..+.+...++..+++.-. +.-+
T Consensus 270 ~SK~~~l~GlRiG~li~~~~~l~~~~~~~~---------------------~~--~~~s~~~Q~a~~~~L~~~~~~~~~l 326 (468)
T PLN02450 270 LSKDLGLPGFRVGAIYSNDEMVVSAATKMS---------------------SF--GLVSSQTQYLLSALLSDKKFTKNYL 326 (468)
T ss_pred ccccCCCCCccEEEEEECCHHHHHHHHHHh---------------------hc--CCCCHHHHHHHHHHhCCchhHHHHH
Confidence 999999888 9999998654 33332211 01 1234455555555554211 1113
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 017640 343 QKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+..+++..+..+.+.+.|.+.
T Consensus 327 ~~~~~~l~~rr~~l~~~L~~~ 347 (468)
T PLN02450 327 EENQKRLKQRQKKLVSGLEAA 347 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 445666677777777777765
No 128
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.2e-23 Score=186.83 Aligned_cols=269 Identities=15% Similarity=0.158 Sum_probs=199.1
Q ss_pred CCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcEEEe
Q 017640 66 KKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~t 135 (368)
+.++.+.++.++ +..+.+.+|+.+.++.-..|. |+....+...|+++|++++.+ .+++|++|
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~--------Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~lt 132 (447)
T KOG0259|consen 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNG--------YAPSVGILPARRAVAEYLNRDLPNKLTADDVVLT 132 (447)
T ss_pred ceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCC--------cCCccccHHHHHHHHHHhhcCCCCccCcCceEEe
Confidence 478999998765 457788888888887543332 223445558999999997765 33599999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~ 213 (368)
+|+++||++++.++ .+||..|+++.|+|+- +...+...|.+++++.+-+ +|.+|++.+|+.++++|.+++
T Consensus 133 sGC~qAIe~~i~~L----A~p~aNILlPrPGfp~----Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aiv 204 (447)
T KOG0259|consen 133 SGCSQAIELAISSL----ANPGANILLPRPGFPL----YDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIV 204 (447)
T ss_pred ccchHHHHHHHHHh----cCCCCceecCCCCCch----HHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEE
Confidence 99999999999999 7999999999998887 4556677799999999864 599999999999999999999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcC---Cc---ccc-cCCCCCccEEEecCcCcCCCCc--ceEEE
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV---PH---MVV-DVQGLDADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~---~~---~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+.+|+||.|.+++ +++|+++|+++|+.||.||+|.- |. .|+ .+...-+.+.++|.+|-+=.+| +||++
T Consensus 205 viNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~ 284 (447)
T KOG0259|consen 205 VINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIA 284 (447)
T ss_pred EeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEE
Confidence 9999999999999 89999999999999999999872 22 222 2333457889999999444445 99999
Q ss_pred EcccccccCCCcc--cCCcceeecccCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 017640 282 GKSDLLSAMPPFL--GGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSII 358 (368)
Q Consensus 282 ~~~~li~~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~ 358 (368)
..+..- .++... .|-- .-++ ...|+..-+.|+-.-|+--.+.-......-++..++...+
T Consensus 285 ~hD~~g-vf~~~~~~q~~~----------------~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~ 347 (447)
T KOG0259|consen 285 LHDPRG-VFRDTKVVQGIK----------------NFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYS 347 (447)
T ss_pred Eecccc-cccchHHHHHHH----------------HHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHH
Confidence 876421 111000 0000 0000 1134444445555555433333455666778899999999
Q ss_pred HHHhhcCCC
Q 017640 359 VIQERHNTT 367 (368)
Q Consensus 359 ~l~~~~g~t 367 (368)
+|+++|+++
T Consensus 348 ~Lk~IP~l~ 356 (447)
T KOG0259|consen 348 RLKDIPCLT 356 (447)
T ss_pred HHhcCCCcc
Confidence 999999976
No 129
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.1e-23 Score=199.21 Aligned_cols=260 Identities=17% Similarity=0.182 Sum_probs=175.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCC-cEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSG-EIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~-~v~~t~g~ 138 (368)
++++.|..+... +.|+.+.+++.+....... .++.......++|+.+++++ |.+ .++ +|++|+|+
T Consensus 33 ~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~--------~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~ 104 (403)
T PRK08636 33 EDIIDFSMGNPDGPTPQHIIDKLCESAQKPKT--------HGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGS 104 (403)
T ss_pred CCEEEcCCcCCCCCCCHHHHHHHHHHhcCCcc--------CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCCh
Confidence 567788877655 3466677776665432100 01111222335666666665 643 223 69999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHH----HHHhcc---cCc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDK----LKEMLS---RKT 209 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~----l~~~l~---~~~ 209 (368)
++++.+++.++ +++||.|++.+|+|+.. ...++..|++++.++++ +++.+|++. ++++++ .++
T Consensus 105 ~~al~~~~~~l----~~~gd~Vlv~~P~y~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 176 (403)
T PRK08636 105 KEGYVHLVQAI----TNPGDVAIVPDPAYPIH----SQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKP 176 (403)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcch----HHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCc
Confidence 99999999998 89999999999988874 44455679999999985 346788775 455553 468
Q ss_pred eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCCC-CccEEEecCcCcCCCCc--
Q 017640 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQGL-DADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~~-~~d~~~~s~~K~~g~~G-- 276 (368)
+++++++|+||||.+++ +++|.++|++|+++||+|++|+.-.. ++ .++.. +..++++|+||.||.+|
T Consensus 177 ~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR 256 (403)
T PRK08636 177 KYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWR 256 (403)
T ss_pred eEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccCCccce
Confidence 99999999999999999 67888999999999999999873211 11 22221 34466889999999888
Q ss_pred ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
+||++.++++++.+...... ...++....+. ++..+++.... -++.+++...+..+.+
T Consensus 257 iG~iv~~~~li~~~~~~~~~--------------------~~~~~~~~~q~-~~~~~~~~~~~-~~~~~~~~~~~~~~~l 314 (403)
T PRK08636 257 VGFVVGNKKLVGALKKIKSW--------------------LDYGMFTPIQV-AATIALDGDQS-CVEEIRETYRKRRDVL 314 (403)
T ss_pred eeeeeCCHHHHHHHHHHHHH--------------------hcccCChHHHH-HHHHHHhCcHH-HHHHHHHHHHHHHHHH
Confidence 99999999988776643210 00123333333 33334432112 2556666677777777
Q ss_pred HHHHHhh
Q 017640 357 IIVIQER 363 (368)
Q Consensus 357 ~~~l~~~ 363 (368)
.+.|.+.
T Consensus 315 ~~~L~~~ 321 (403)
T PRK08636 315 IESFANA 321 (403)
T ss_pred HHHHHHC
Confidence 7777663
No 130
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=3.1e-23 Score=201.01 Aligned_cols=263 Identities=18% Similarity=0.177 Sum_probs=192.6
Q ss_pred CCCeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
|+++++|..+.+ + ..++.+++++.+.++.+..... .....++..+...+++++++++++.+ +.|++++|.+ ++
T Consensus 108 G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~--g~r~~yg~~~~~~~Lee~La~~~~~~--~~i~~s~G~~-a~ 182 (481)
T PLN02822 108 GKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSC--GPRGFYGTIDVHLDCETKIAKFLGTP--DSILYSYGLS-TI 182 (481)
T ss_pred CceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCc--ccCccccCHHHHHHHHHHHHHHhCCC--CEEEECCHHH-HH
Confidence 356677765543 3 4689999999999988643221 11112344677889999999999976 4788888876 67
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc---------cCc-eEE
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS---------RKT-KLV 212 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~---------~~~-~~v 212 (368)
..++.++ .++||.|++....|.+... .+...+.+++.++.+ |.+.++..++ +++ ++|
T Consensus 183 ~sai~a~----~~~gd~Ii~d~~~H~s~~~----~~~ls~~~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~I 249 (481)
T PLN02822 183 FSVIPAF----CKKGDIIVADEGVHWGIQN----GLYLSRSTIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYI 249 (481)
T ss_pred HHHHHHh----CCCCCEEEEeCCccHHHHH----HHHHcCCeEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEE
Confidence 8888888 8999999988887766533 344558899999876 4555544442 234 799
Q ss_pred EEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEc
Q 017640 213 VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGK 283 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~ 283 (368)
+++.+++++|.+.|+++|.++|++||+++|+|++|++|... +++....+|++++|++|.+|..| |+++++
T Consensus 250 vve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G-G~i~g~ 328 (481)
T PLN02822 250 VVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG-GFCTGS 328 (481)
T ss_pred EEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC-eEEEcC
Confidence 99999999999999999999999999999999999966531 12222358999999999999887 999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.++....+ ..| +++.+.....++.++++.++. .+.+.++.+++.+++.+.|.++
T Consensus 329 ~~ii~~~~~~~~~------------------~~f-sa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 329 ARVVDHQRLSSSG------------------YVF-SASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred HHHHHHHHhcCCc------------------eee-ccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhc
Confidence 9988776532211 122 223334444555568877664 3678889999999999999987
Q ss_pred cCCC
Q 017640 364 HNTT 367 (368)
Q Consensus 364 ~g~t 367 (368)
.|++
T Consensus 388 ~g~~ 391 (481)
T PLN02822 388 PGLS 391 (481)
T ss_pred CCcc
Confidence 6643
No 131
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.92 E-value=3.9e-23 Score=194.57 Aligned_cols=259 Identities=18% Similarity=0.198 Sum_probs=188.5
Q ss_pred CCCeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
|..++.|..+.+ + +.++.+.+++.+++..+.. .. +.+....+..+...++++.++++++.+ +.|++++| ++++
T Consensus 15 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~-~~-~~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~~~G-~~~~ 89 (360)
T TIGR00858 15 GRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGA-GS-TASRLVSGNSPLHEELEEELAEWKGTE--AALLFSSG-YLAN 89 (360)
T ss_pred CceEEecccCCcccCCCCHHHHHHHHHHHHhcCC-CC-CCcCcccCCcHHHHHHHHHHHHHhCCC--CEEEECch-HHHH
Confidence 356677777643 4 4678999999998876432 11 111111222455678999999999864 36677766 5566
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc----CceEEEEcccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHIS 218 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~ 218 (368)
..++.++ +++||+|++.++.|++.... ++..|++++.++. +|++.|++.+++ ++++|++++++
T Consensus 90 ~~~l~~~----~~~gd~v~~~~~~~~~~~~~----~~~~g~~~~~~~~-----~d~~~l~~~~~~~~~~~~~~v~~~~~~ 156 (360)
T TIGR00858 90 VGVISAL----VGKGDLILSDALNHASLIDG----CRLSGARVRRYRH-----NDVEHLERLLEKNRGERRKLIVTDGVF 156 (360)
T ss_pred HHHHHHh----CCCCCEEEEEccccHHHHHH----HHhcCCceEEecC-----CCHHHHHHHHHHcccCCCeEEEEeCCc
Confidence 6677776 78999999999988875443 4556888888774 388999988864 46899999999
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc---------CCCCCccEEEecCcCcCCCCcceEEEEccccccc
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD---------VQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~---------~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~ 289 (368)
|+||...|+++|.++|+++|+++|+|++|+.+....+ +...+.+++++|+||.||+.| |++++++++++.
T Consensus 157 ~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g-G~~~~~~~~~~~ 235 (360)
T TIGR00858 157 SMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG-AYVAGSQALIDY 235 (360)
T ss_pred cCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC-cEEEcCHHHHHH
Confidence 9999999999999999999999999999986543211 222367899999999999987 899998888766
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+....+ .+ .++.+..+++++.++++++.. .+.++++..++.+++.+.|.+.
T Consensus 236 ~~~~~~~~------------------~~-~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 236 LINRARTL------------------IF-STALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred HHHhCccc------------------ee-cCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHc
Confidence 54222100 11 123445566777788887664 3677899999999999999875
No 132
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.92 E-value=3e-24 Score=203.29 Aligned_cols=169 Identities=25% Similarity=0.379 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.+++++|.+ ++++++|+++|+..++.++ +++||+|+++++.|.+++..+...++..|+++++++
T Consensus 60 ~p~~~~le~~la~l~g~~---~~v~~ssG~~Ai~~al~al----~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd 132 (390)
T PRK08133 60 NPTVTMFQERLAALEGAE---ACVATASGMAAILAVVMAL----LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVD 132 (390)
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEEC
Confidence 456778999999999975 5788899999999999888 889999999999999988877777788899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++++++++++++++|++++++||+|.+.|+++|.++|++||+++++|++++.+.....+ ..+.|+++.|++
T Consensus 133 ~~-----d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~pl-~~g~Divv~S~s 206 (390)
T PRK08133 133 LT-----DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQPL-KLGADVVIHSAT 206 (390)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCcEEEeecc
Confidence 75 899999999999999999999999999999999999999999999999999766542222 347899999999
Q ss_pred CcCCCCc---ceEEEEcccccccCC
Q 017640 270 KMCGPTG---IGFLFGKSDLLSAMP 291 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~~l~ 291 (368)
|+++++| .|+++.++++++.+.
T Consensus 207 K~~~g~g~~~GG~vv~~~~~~~~~~ 231 (390)
T PRK08133 207 KYLDGQGRVLGGAVVGSKELMEEVF 231 (390)
T ss_pred eeecCCcceEeEEEEcCHHHHHHHH
Confidence 9998877 377888877765544
No 133
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.92 E-value=1.1e-23 Score=202.50 Aligned_cols=218 Identities=17% Similarity=0.200 Sum_probs=158.8
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhh--c-cCCCCcchhhHHHHHHHHHHHHHHHHHcCC------C-CCCcEEEe
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYN--S-NVHRGIHFLSAKATDEYELARKKVAAFINA------S-DSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~------~-~~~~v~~t 135 (368)
+++|.|+.+.+.++.+.+.+.+.+....-. . ......+...+........+|+++|++++. + .+++|++|
T Consensus 47 ~g~i~l~~aeN~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit 126 (447)
T PLN02607 47 SGVIQMGLAENQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLT 126 (447)
T ss_pred CceEEEechhhhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEc
Confidence 789999999999999988888877643100 0 000000000011123344677777777652 1 23499999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhccc------
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR------ 207 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~------ 207 (368)
+|+++++.+++.++ +++||.|++++|.|++....+. .+.|++++.|+++++ +.+|++++++++.+
T Consensus 127 ~G~t~al~~l~~~l----~~pGD~Vlv~~P~Y~~f~~~~~---~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~ 199 (447)
T PLN02607 127 AGATAANELLTFIL----ADPGDALLVPTPYYPGFDRDLR---WRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANI 199 (447)
T ss_pred CChHHHHHHHHHHh----CCCCCEEEEcCCCCcchHHHHH---hcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCC
Confidence 99999999999988 8999999999999988643322 246899999998743 56899999998864
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cC----C--C-CCccEEEecCcC
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DV----Q--G-LDADFLVASSHK 270 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~----~--~-~~~d~~~~s~~K 270 (368)
+++++++++|+||||.++| +++|.++|++||+++|+|++|+.... ++ ++ . . .+..+++.|+||
T Consensus 200 ~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK 279 (447)
T PLN02607 200 RVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK 279 (447)
T ss_pred CeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence 6899999999999999999 78899999999999999999984221 11 11 0 1 234578899999
Q ss_pred cCCCCc--ceEEEE-cccccccC
Q 017640 271 MCGPTG--IGFLFG-KSDLLSAM 290 (368)
Q Consensus 271 ~~g~~G--~G~l~~-~~~li~~l 290 (368)
.||.+| +|+++. ++++++.+
T Consensus 280 ~fg~~GlRvG~ivs~n~~l~~~~ 302 (447)
T PLN02607 280 DLGLPGFRVGTIYSYNDKVVTTA 302 (447)
T ss_pred cCCCCcceEEEEEEcCHHHHHHH
Confidence 999888 999998 44554443
No 134
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=3.6e-23 Score=194.25 Aligned_cols=252 Identities=11% Similarity=0.139 Sum_probs=182.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
+.+.|+.+... .+|+.+.+++.+.+.....+|.. ...++|++++++++.+++ +|++|+|+++++..+
T Consensus 20 ~~~~l~~~~~~~~~p~~~~~a~~~~~~~~~~Y~~~-----------~~~~lr~~ia~~~~~~~~-~i~it~Ga~~~l~~~ 87 (354)
T PRK06358 20 MILDFSANINPLGVPESLKQAITENLDKLVEYPDP-----------DYLELRKRIASFEQLDLE-NVILGNGATELIFNI 87 (354)
T ss_pred ceEEecCCCCCCCCCHHHHHHHHHHHHhhhcCCCc-----------cHHHHHHHHHHHhCCChh-hEEECCCHHHHHHHH
Confidence 46778777655 56888999988876544333321 134899999999998765 999999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
+.++ .+ +.|++.+|.|+. +...++..|++++.++.+.+ +.+| +++++.+.++++++++++|+||||.
T Consensus 88 ~~~~-----~~-~~v~i~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~ 156 (354)
T PRK06358 88 VKVT-----KP-KKVLILAPTFAE----YERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQ 156 (354)
T ss_pred HHHh-----CC-CcEEEecCChHH----HHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCC
Confidence 9865 23 589999997765 55666778999999998743 5678 6666677778999999999999999
Q ss_pred ccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----c-c-cCCCCCccEEEecCcCcCCCCc--ceEEEEc-ccccccC
Q 017640 224 ILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----V-V-DVQGLDADFLVASSHKMCGPTG--IGFLFGK-SDLLSAM 290 (368)
Q Consensus 224 ~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~-~-~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~-~~li~~l 290 (368)
+++ +++|.++|++||+++|+|++|..-.. + + .....+..+++.|+||.||.+| +||++++ +.+++.+
T Consensus 157 ~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~ 236 (354)
T PRK06358 157 LISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKL 236 (354)
T ss_pred ccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHH
Confidence 999 77888899999999999999862211 1 1 1222346688999999999888 9999985 5666655
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..... ..+.+.....++..+++.-. -+++.++..++..+++.+.|++.+|+
T Consensus 237 ~~~~~-----------------------~~~~~~~~q~~~~~~l~~~~--~~~~~~~~~~~~r~~l~~~L~~~~~~ 287 (354)
T PRK06358 237 LQMRE-----------------------PWSINTFADLAGQTLLDDKE--YIKKTIQWIKEEKDFLYNGLSEFKGI 287 (354)
T ss_pred HHhCC-----------------------CCcchHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 43321 11345555555555554211 13556667777788888888776554
No 135
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.92 E-value=4.5e-23 Score=210.42 Aligned_cols=236 Identities=17% Similarity=0.179 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH----HHHHHHHHHccCCCCCC-CC----EEEEcCCCCcccHHHHHHH
Q 017640 107 AKATDEYELARKKVAAFINASDSGEIVFTKNAT----EAINLVAYSWGLSNLKS-GD----EVILTVAEHHSAIVPWQLV 177 (368)
Q Consensus 107 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t----~a~~~~~~~~~~~~~~~-gd----~vl~~~~~~~s~~~~~~~~ 177 (368)
.+..+.+.++|+.+++++|.+ .|+|+++++ ++++++++++ .++ || +|+++..+|.++..++..
T Consensus 564 ~g~~~~~~~~r~~la~i~g~~---~v~f~pnaga~ge~a~~~vi~~~----~~~~Gd~~r~~vli~~~aH~sn~a~a~~- 635 (993)
T PLN02414 564 QGYQEMFEDLGDLLCEITGFD---SFSLQPNAGAAGEYAGLMVIRAY----HLSRGDHHRNVCIIPVSAHGTNPASAAM- 635 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCC---eEEEcCCCcHHHHHHHHHHHHHH----HhccCCCCCCEEEeCCCcCccCHHHHHH-
Confidence 457889999999999999993 899999999 8999999998 444 77 899999999999866654
Q ss_pred HHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc
Q 017640 178 AQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV 254 (368)
Q Consensus 178 ~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~ 254 (368)
.|.+++.|+.+++|.+|+++|++++++ ++++|++++++|.+|...|+++|+++||++|+++++|+++..+...+
T Consensus 636 ---~G~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l 712 (993)
T PLN02414 636 ---CGMKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGL 712 (993)
T ss_pred ---CCCEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCc
Confidence 599999999999999999999999984 77999999999999999999999999999999999999999887433
Q ss_pred -cCCCCCccEEEecCcC-cCC-----CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCC---CCCCCCH
Q 017640 255 -DVQGLDADFLVASSHK-MCG-----PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF---EAGTPAI 324 (368)
Q Consensus 255 -~~~~~~~d~~~~s~~K-~~g-----~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~gt~~~ 324 (368)
+..++++|++++|.|| +++ ++|+|++++++++...+.....+... . + ..|+ ..||.+.
T Consensus 713 ~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~-~--~---------~~r~~~s~iGt~~~ 780 (993)
T PLN02414 713 TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTG-G--I---------PRPEKTQPLGTISA 780 (993)
T ss_pred CCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCC-C--c---------ccccCCCCcCCccc
Confidence 5567899999999999 443 44599999999776655533221110 0 0 0122 2467554
Q ss_pred ---HHHHHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 325 ---GEAIGLGAAIDYLSTIG---MQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 325 ---~~~~a~~~al~~~~~~g---~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
.+...+..++.++...| ++.+.++...+++|+.++|.+..+
T Consensus 781 a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~ 827 (993)
T PLN02414 781 APWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYP 827 (993)
T ss_pred hhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 44466777777777765 555589999999999999987544
No 136
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.92 E-value=2.1e-23 Score=198.00 Aligned_cols=252 Identities=15% Similarity=0.164 Sum_probs=179.7
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
..||++++...+.++.+.+.+.. .. +.+.++....+...++++.+|+++|.+.. +++++++.++..++
T Consensus 30 ~pi~~~~~~~~~~~~~~~~~~~~-------~~--~~~~y~r~~~p~~~~Le~~lA~l~G~~~~---~~~~sG~~Ai~~~l 97 (398)
T PRK07504 30 EALFLTQGFVYDTAEAAEARFKG-------ED--PGFIYSRYSNPTVDMFEKRMCALEGAEDA---RATASGMAAVTAAI 97 (398)
T ss_pred CCeECCCCccCCCHHHHHHHhcc-------Cc--CCceeecCCCchHHHHHHHHHHHhCCCee---eEecCHHHHHHHHH
Confidence 34999998877766665542211 00 11112222234566899999999999743 45678888998888
Q ss_pred HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC
Q 017640 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (368)
.++ +++||+|+++++.|.++...+...++..|++++.++. +|++++++++++++++|++++++||||.+.|
T Consensus 98 ~~~----l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~-----~d~e~l~~ai~~~tklV~lesp~NptG~v~d 168 (398)
T PRK07504 98 LCQ----VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG-----LDLDNWEKAVRPNTKVFFLESPTNPTLEVID 168 (398)
T ss_pred HHH----hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-----CCHHHHHHhcCcCceEEEEECCCCCCcEecC
Confidence 776 8899999999999998877777777778999998863 4899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCc---ceEEEEccccccc-CCCcccCCcceee
Q 017640 227 IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG---IGFLFGKSDLLSA-MPPFLGGGEMISD 302 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G---~G~l~~~~~li~~-l~~~~~g~~~~~~ 302 (368)
+++|.++|+++|+++++|++|+.+... .....+.|+++.|++|+++++| .|+++.+++.+.. ++......
T Consensus 169 l~~I~~la~~~gi~lvvD~a~a~~~~~-~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~----- 242 (398)
T PRK07504 169 IAAVAKIANQAGAKLVVDNVFATPLFQ-KPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHT----- 242 (398)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccC-CchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHh-----
Confidence 999999999999999999999876542 2224579999999999988766 4677777776542 22111100
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..+++-. .+..++.-++. +....++..+++..+.++|++++++
T Consensus 243 ----------------g~~~s~~---~A~~~l~~L~t--l~~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 243 ----------------GPSLSPF---NAWTLLKGLET--LPVRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred ----------------CCCCCHH---HHHHHHhccch--HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 0122222 22233333333 3444455568888888899887764
No 137
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.92 E-value=3.7e-23 Score=198.55 Aligned_cols=268 Identities=16% Similarity=0.136 Sum_probs=189.0
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHH-HHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.+.++|..+... +++.|++++...+...+ +++. +.+..+....+.+++ +++.+++++|.+.. .|++++ +|+|+
T Consensus 25 ~~~~~l~~~~n~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~~~~~~la~~~g~~~~-~i~~~s-gt~al 100 (416)
T PRK00011 25 EEHIELIASENF-VSPAVMEAQGSVLTNKYAEGYPG-KRYYGGCEYVDVVEQLAIDRAKELFGAEYA-NVQPHS-GSQAN 100 (416)
T ss_pred hcCeeeecccCc-CCHHHHHHHhchhhcccccCCCC-ccccccchHHHHHHHHHHHHHHHHhCCCce-eeecCC-chHHH
Confidence 455777776554 78999999877754322 2221 222223333444444 68899999999753 566655 57899
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHH-HHHHcCCEEEEEeCC-CCCCCCHHHHHHhccc-CceEEEEccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VAQKTGANLKFLNLN-DDESPDLDKLKEMLSR-KTKLVVIHHISN 219 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~-~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~n 219 (368)
..++.++ +++||+|++++++|.+....+.. .....|++++.++++ +++.+|++++++++++ ++++|++++.
T Consensus 101 ~~~l~~l----~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~-- 174 (416)
T PRK00011 101 AAVYFAL----LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGAS-- 174 (416)
T ss_pred HHHHHHh----cCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCC--
Confidence 9999988 89999999999999875432211 112346788888887 3588999999999975 7898888754
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcC-CCCcceEEEEc-ccccccCCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGK-SDLLSAMPP 292 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~-~~li~~l~~ 292 (368)
.+|...|+++|.++|++||+++|+|++|+.|.. +..+. +.|++++|+||++ |+. +|+++++ +++++.++.
T Consensus 175 ~~~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~ 251 (416)
T PRK00011 175 AYSRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--HADVVTTTTHKTLRGPR-GGLILTNDEELAKKINS 251 (416)
T ss_pred cCCCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--CCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHH
Confidence 356778999999999999999999999986654 22333 6899999999966 455 4788775 577766653
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.... +..+++....++++..++......+++...++..++++++.+.|.+. |++
T Consensus 252 ~~~~--------------------~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 305 (416)
T PRK00011 252 AVFP--------------------GIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFR 305 (416)
T ss_pred HhCc--------------------cccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 3211 11235556666666666655545567888899999999999999875 543
No 138
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=2.5e-23 Score=196.50 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=174.9
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHH----HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAK----ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
|||.+...++.+.+.+++.++..+. |+.+.+..+.. ..+..+++|+.+|+++|.+. .+++++|. .++..+
T Consensus 14 YL~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~--~l~~~sG~-~a~~~~ 87 (370)
T PRK05937 14 FLGFSRSDTLVHEVEKRYRLYCRQF---PHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE--AFIVPSGY-MANLGL 87 (370)
T ss_pred ccCCCCCHHHHHHHHHHHHHhcccc---CCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe--EEEECChH-HHHHHH
Confidence 4444444444444444444433222 33233344444 67889999999999999963 56666665 566665
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISN 219 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n 219 (368)
+..+ .++||.|++...+|.++...+... .+.. +.++. .|+++|++.+++ ++.+|++++++|
T Consensus 88 ~~~~----~~~~d~ii~d~~~H~sv~~~~~~~---~~~~-~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s 154 (370)
T PRK05937 88 CAHL----SSVTDYVLWDEQVHISVVYSLSVI---SGWH-QSFRH-----NDLDHLESLLESCRQRSFGRIFIFVCSVYS 154 (370)
T ss_pred HHHh----CCCCCEEEEEhhhhHHHHHHHHHc---CCce-EEecC-----CCHHHHHHHHHhhhccCCCcEEEEEecCCC
Confidence 5554 567889999899999987765542 1333 33332 389999998862 456788999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCC----CCC---ccEEEecCcCcCCCCcceEEEEcccccccCCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ----GLD---ADFLVASSHKMCGPTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~----~~~---~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~ 292 (368)
++|.+.|+++|.++|+++|+++++|++|+.|..+.+.. .++ .++.+.|++|.+|+.|+|+++. ++..+.+..
T Consensus 155 ~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G~~vl~~-~~~~~~~~~ 233 (370)
T PRK05937 155 FKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSS-SEVKQDLML 233 (370)
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCceEEEcC-HHHHHHHHH
Confidence 99999999999999999999999999999887765542 122 2367789999999999787765 433332221
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
... ..+|.. +.+...++++.++++++.+.+ +.+++++.++.+++.+.+..
T Consensus 234 ~~~------------------~~~~s~-~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~ 283 (370)
T PRK05937 234 NSP------------------PLRYST-GLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSS 283 (370)
T ss_pred hCC------------------CCeecC-CCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCC
Confidence 100 123333 456667889999999998876 66788999999999887754
No 139
>PRK08175 aminotransferase; Validated
Probab=99.91 E-value=6.7e-23 Score=195.33 Aligned_cols=259 Identities=15% Similarity=0.171 Sum_probs=176.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g~ 138 (368)
++++.|+.+... ..++.+.+++.+.+..... ..+. ......++|+++++++ |.. +++++++|+|+
T Consensus 29 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~----~~Y~----~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~ 100 (395)
T PRK08175 29 EDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDT----HGYS----TSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGS 100 (395)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCc----CCCC----CCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCc
Confidence 567788877655 4566677777665532110 1111 1222335666666665 443 33379999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIH 215 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~ 215 (368)
++++..++.++ +++||+|++++|+|+.....+ +..|++++.++.++++. +.++++++++ +++++|+++
T Consensus 101 ~~~l~~~~~~~----~~~gd~Vlv~~P~y~~~~~~~----~~~g~~~~~v~~~~~~~-~~~~l~~~l~~~~~~~~~v~i~ 171 (395)
T PRK08175 101 KEGLAHLMLAT----LDHGDTVLVPNPSYPIHIYGA----VIAGAQVRSVPLVEGVD-FFNELERAIRESYPKPKMMILG 171 (395)
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCCcchHHHH----HHcCCeEEEEecccCCC-cHHHHHHHHhhccCCceEEEEe
Confidence 99999999888 899999999999998865443 34699999999876543 4788888776 378999999
Q ss_pred ccccccccccCH---HHHHHHHHhcCCEEEEecCCcCCc----ccc---cCCC-CCccEEEecCcCcCCCCc--ceEEEE
Q 017640 216 HISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPH----MVV---DVQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 216 ~~~n~tG~~~~l---~~i~~l~~~~g~~li~D~a~~~~~----~~~---~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+++||||.+++. ++|.++|++||+++|+|++|..-. ... .+.. .+..+++.|+||.||.+| +||++.
T Consensus 172 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~ 251 (395)
T PRK08175 172 FPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG 251 (395)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC
Confidence 999999999995 789999999999999999986311 111 1111 234577899999999888 899999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+..... .... +.+.....++..+++.... -++.++++.++..+++.+.|.+
T Consensus 252 ~~~l~~~~~~~~~--------------------~~~~-~~~~~~q~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~L~~ 309 (395)
T PRK08175 252 NPELVSALARIKS--------------------YHDY-GTFTPLQVAAIAALEGDQQ-CVRDIAEQYKRRRDVLVKGLHE 309 (395)
T ss_pred CHHHHHHHHHHHh--------------------hccc-CCCcHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887653321 0011 2222233444444432222 2566677777778888888876
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 310 ~ 310 (395)
T PRK08175 310 A 310 (395)
T ss_pred c
Confidence 5
No 140
>PRK06460 hypothetical protein; Provisional
Probab=99.91 E-value=2.3e-23 Score=196.36 Aligned_cols=221 Identities=18% Similarity=0.174 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEE
Q 017640 107 AKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (368)
Q Consensus 107 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 186 (368)
.......+++++.+++++|.+. .+++ +|+++|+..++.++ +++||+|++.++.|..++..+...++..|++++
T Consensus 41 r~~~p~~~~L~~~lA~l~g~~~--~v~~-~sG~~ai~~~l~al----~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~ 113 (376)
T PRK06460 41 REANPTVLELTKKIVELENAEM--GVAF-SSGMGAISTTALAL----LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVD 113 (376)
T ss_pred CCCCccHHHHHHHHHHHhCCCc--EEEe-CCHHHHHHHHHHHH----hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEE
Confidence 3345667789999999999963 5565 45568999999988 899999999999888888778888888899999
Q ss_pred EEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEe
Q 017640 187 FLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVA 266 (368)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~ 266 (368)
.++.+ +.+.+++.+++++++|++++++||||.++|+++|.++|+++|+++++|++|+.+.....+ ..+.|+++.
T Consensus 114 ~~~~~-----~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~~~~~~~l-~~~~divv~ 187 (376)
T PRK06460 114 ASNPG-----SDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFSTPINQKPL-ELGADIVVH 187 (376)
T ss_pred EECCC-----CHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCccccCChh-hcCCCEEEe
Confidence 88865 344566666778999999999999999999999999999999999999999865321112 346899999
Q ss_pred cCcCcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 267 SSHKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 267 s~~K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
|++|++++.+ +|+++.++++++.++.....++ . +.+... +..+++-++. ++
T Consensus 188 S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g--------------------~-~~~~~~---a~~~l~~~~~--l~ 241 (376)
T PRK06460 188 SASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLG--------------------T-SLDPHA---AYLTLRGIKT--LK 241 (376)
T ss_pred ecceeccCCCCceEEEEecCHHHHHHHHHHHHhcC--------------------C-CCCHHH---HHHHHhchhh--HH
Confidence 9999887554 7999998888776653322111 1 122111 1122222222 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC
Q 017640 344 KIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
...++..+.+.++.++|++++.+
T Consensus 242 ~r~~~~~~n~~~l~~~L~~~p~v 264 (376)
T PRK06460 242 IRMDVINRNAEQIAEFLEGHPKV 264 (376)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCc
Confidence 55677888889999999887654
No 141
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.91 E-value=2.6e-23 Score=196.52 Aligned_cols=218 Identities=21% Similarity=0.262 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+...++++.+++++|.+ .+++++|+++|+..++.++ +++||+|+++.+.|.+.+..+...++..|++++.++
T Consensus 53 ~p~~~~le~~la~l~g~~---~~~~~~sG~~Ai~~al~al----~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~ 125 (380)
T TIGR01325 53 NPTVAAFEERIAALEGAE---RAVATATGMSAIQAALMTL----LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVD 125 (380)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEEC
Confidence 455678999999999985 5678899999999999888 889999999999998887777777788899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+.....+ ..++|+++.|++
T Consensus 126 ~~-----d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~~pl-~~g~Divv~S~s 199 (380)
T TIGR01325 126 PT-----DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQQPL-KLGADVVVYSAT 199 (380)
T ss_pred CC-----CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEeecc
Confidence 75 799999999889999999999999999999999999999999999999999855432222 457899999999
Q ss_pred CcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 270 KMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
|+++++| .|+++.++++++.++...... .++.+....+ .+++-++. +....
T Consensus 200 K~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~---------------------g~~~~p~~a~---~~l~~l~t--l~~r~ 253 (380)
T TIGR01325 200 KHIDGQGRVMGGVIAGSEELMAEVAVYLRHT---------------------GPAMSPFNAW---VLLKGLET--LSLRM 253 (380)
T ss_pred ceecCCCCeEEEEEEeCHHHHHHHHHHHHhh---------------------CCCCCHHHHH---HHHhccCc--HHHHH
Confidence 9888766 488888888777665432111 1122222222 22222222 33345
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 017640 347 AYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~ 366 (368)
++..+.+.++.++|++++++
T Consensus 254 ~~~~~~a~~la~~L~~~p~v 273 (380)
T TIGR01325 254 QKQFDSALAIAEWLQAQPQV 273 (380)
T ss_pred HHHHHHHHHHHHHHHcCCCc
Confidence 66667777888888877653
No 142
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=1.9e-23 Score=197.99 Aligned_cols=223 Identities=17% Similarity=0.204 Sum_probs=168.0
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE
Q 017640 105 LSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN 184 (368)
Q Consensus 105 ~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 184 (368)
++....+..+++++.+++++|.+ ..++++|+++|+..++.++ +++||+|+++.+.|.++...+...++..|++
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~---~~i~~ssG~~Ai~~~l~al----l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~ 130 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAE---AATAFSTGMAAISNTLYTF----LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVD 130 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCC---eEEEeCChHHHHHHHHHHh----cCCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence 33344566778999999999975 4466667788999999887 8999999999999998877777767788999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEE
Q 017640 185 LKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFL 264 (368)
Q Consensus 185 v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~ 264 (368)
+++++.. |++.+++++++++++|++++++||||.+.|+++|.++|++||+++++|++|+.+.....+ ..+.|++
T Consensus 131 v~~vd~~-----d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~~~Div 204 (398)
T PRK08249 131 VTLCETG-----DHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFATPINQNPL-ALGADLV 204 (398)
T ss_pred EEEcCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCccccCCch-hhCCCEE
Confidence 9887753 899999999999999999999999999999999999999999999999999865432112 3579999
Q ss_pred EecCcCcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 265 VASSHKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 265 ~~s~~K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
+.|++|++|++| .|+++.++++++.++.... ....+.+....+.+...++ .
T Consensus 205 v~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~---------------------~~g~~~s~~~a~l~l~~l~---t-- 258 (398)
T PRK08249 205 IHSATKFLSGHADALGGVVCGSKELMEQVYHYRE---------------------INGATMDPMSAYLILRGMK---T-- 258 (398)
T ss_pred eccCceecCCCCCceEEEEECCHHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHhCcc---h--
Confidence 999999888765 5777777777776653321 0111233322222222333 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 342 MQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+....++..+++..+.++|++++.+
T Consensus 259 L~~R~~~~~~na~~la~~L~~~p~v 283 (398)
T PRK08249 259 LKLRVRQQQESAMALAKYLQTHPKV 283 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 2333466678888888888877653
No 143
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.91 E-value=8.1e-23 Score=188.50 Aligned_cols=272 Identities=13% Similarity=0.145 Sum_probs=206.3
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccC--CCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CCHHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNV--HRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLVA 146 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t-~g~t~a~~~~~ 146 (368)
|.-.+++..+|++|++++++.+..+.... -...++.+..+.+.++++++.+.++++.+++++|+|. .|+|.++.++.
T Consensus 6 ~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~ 85 (364)
T PRK12462 6 LNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIP 85 (364)
T ss_pred ceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHH
Confidence 33445566889999999998888764411 1124455667889999999999999999876678666 56899999999
Q ss_pred HHccCCCCCCCCEEE-EcCCCCcccHHHHHHHHHHcCCEEEEEeCC----CCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 147 YSWGLSNLKSGDEVI-LTVAEHHSAIVPWQLVAQKTGANLKFLNLN----DDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl-~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~----~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
..+ +.+|++++ +...++.+.. +...++++| ++..+... ....++++.+ .+.++.+.|.+++..+.|
T Consensus 86 ~Nl----l~~g~~~~~~~~tG~fg~r--~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETst 156 (364)
T PRK12462 86 MNF----SRPGAAAPEYVTTGYWSRK--AIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVE 156 (364)
T ss_pred HHc----CCCCCcEEEEEeCCHHHHH--HHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCc
Confidence 988 88999665 5666666654 566677777 55554421 1234456665 344567999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCccee
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~ 301 (368)
|+.+| ++.+.+++++++|.+.+++..++|++++ |++.++.+|.+||+|+++++++++++++..+...
T Consensus 157 Gv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~~--dvi~agsQKnlgP~Gltvvivs~~al~~~~~~~p------ 223 (364)
T PRK12462 157 GLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEAY--GMVYAHAQKNLGPAGVTVAIIRRALLERVPDTLP------ 223 (364)
T ss_pred eEecC-----cccccCCCeEEEEcCchhhCCCCChHHc--cEEEeeccccCCCCceEEEEECHHHHhhccccCC------
Confidence 99997 3333478999999999999999999885 9999999999999999999999999987764321
Q ss_pred ecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~--g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+.++..+..... ...||++..++++..+++++.+. |++.+.++.+++++.+++.|.+..|+
T Consensus 224 -~~ldy~~~~~~~s--~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~ 287 (364)
T PRK12462 224 -PMLDFRTHVEHRS--NYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEV 287 (364)
T ss_pred -chhhHHHHHhcCC--CCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 1112211111112 22399999999999999999887 99999999999999999999988753
No 144
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.91 E-value=2.3e-23 Score=196.38 Aligned_cols=219 Identities=20% Similarity=0.241 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.+++++|.+ ..++++|+++|+..++.++ +++||+|+++.+.|+++...+...++..|++++.+
T Consensus 38 ~~p~~~~le~~la~l~g~~---~a~~~~sG~~Ai~~~l~~l----~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 110 (369)
T cd00614 38 GNPTVDALEKKLAALEGGE---AALAFSSGMAAISTVLLAL----LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV 110 (369)
T ss_pred CChhHHHHHHHHHHHHCCC---CEEEEcCHHHHHHHHHHHH----cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence 3566778999999999975 5577788899999999988 88999999999999998877777777889999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.+ |++++++++++++++|++++++||+|.+.|+++|.++|++||+++++|++++.+... ..-..+.|+++.|+
T Consensus 111 ~~~-----d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~~~~~-~~~~~g~Divv~S~ 184 (369)
T cd00614 111 DPD-----DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYLQ-RPLELGADIVVHSA 184 (369)
T ss_pred CCC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcchhcC-ChhhhCCcEEEecc
Confidence 876 789999999889999999999999999999999999999999999999999877541 22245789999999
Q ss_pred cCcCCCCc---ceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 017640 269 HKMCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~ 344 (368)
+|.+|++| +|+++.++ ++++.++..... + .++.+....+ .++.-++. +..
T Consensus 185 tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~--------------------~-g~~~~p~~a~---~~l~~l~t--l~~ 238 (369)
T cd00614 185 TKYIGGHSDVIAGVVVGSGEALIQRLRFLRLA--------------------L-GTILSPFDAW---LLLRGLKT--LPL 238 (369)
T ss_pred ceeccCCCCceEEEEEeCcHHHHHHHHHHHHh--------------------h-CCCCCHHHHH---HHHcCCCC--HHH
Confidence 99887665 79999987 777766633221 0 1122222222 22232322 444
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC
Q 017640 345 IHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..+++.++.++|.+++++
T Consensus 239 r~~~~~~na~~la~~L~~~~~v 260 (369)
T cd00614 239 RMERHSENALKVAEFLEKHPKV 260 (369)
T ss_pred HHHHHHHHHHHHHHHHHcCCCc
Confidence 5667788888888999887653
No 145
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.91 E-value=5.1e-23 Score=196.78 Aligned_cols=267 Identities=17% Similarity=0.152 Sum_probs=188.0
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHH-HHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYEL-ARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.++| .++.+.+++.|++++.+.+...+ +++. +.+..+....+.+++ .++.+++++|++.. .|+++ |+++|+.
T Consensus 20 ~~~~~-~~~~~~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~-~v~~~-sgt~a~~ 95 (402)
T cd00378 20 ETLEL-IASENFTSPAVMEAMGSDLTNKYAEGYPG-KRYYGGCEYVDEIEDLAIERAKKLFGAEYA-NVQPH-SGSQANL 95 (402)
T ss_pred hCeee-eccCCcCCHHHHHHhcccccccccCCCCC-CcccCCchHHHHHHHHHHHHHHHHhCCCce-eeecC-CcHHHHH
Confidence 33444 34455679999999987764322 2332 222333334444444 67788999999753 45555 5679999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHH-HHHHcCCEEEEEeCCC---CCCCCHHHHHHhcc-cCceEEEEcccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VAQKTGANLKFLNLND---DESPDLDKLKEMLS-RKTKLVVIHHIS 218 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~-~~~~~g~~v~~v~~~~---~~~~d~~~l~~~l~-~~~~~v~~~~~~ 218 (368)
.++.++ +++||+|++.+++|++....+.. .++..|.+++.++++. ++.+|++++++++. ++++++++++++
T Consensus 96 ~~l~~l----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~~~ 171 (402)
T cd00378 96 AVYFAL----LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGASA 171 (402)
T ss_pred HHHHHh----cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecCcc
Confidence 999998 89999999999999876433211 1345587777777653 58999999999985 578999988886
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcC-CCCcceEEEEcc-cccccCC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGKS-DLLSAMP 291 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~-~li~~l~ 291 (368)
|+ ...|+++|.++|++||+++++|++|..|.. +..+. +.|++++|+||++ |+. +|++++++ ++++.+.
T Consensus 172 ~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~dv~~~s~sK~l~G~~-gg~i~~~~~~~~~~l~ 246 (402)
T cd00378 172 YP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GADVVTTTTHKTLRGPR-GGLILTRKGELAKKIN 246 (402)
T ss_pred cC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CCcEEEeccccCCCCCC-ceEEEeccHHHHHHHH
Confidence 64 577999999999999999999999876542 22233 5789999999976 555 47777766 7776664
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..... ...++++...+.++..++......+.+...++..++++++.+.|.+. |++
T Consensus 247 ~~~~~--------------------~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 301 (402)
T cd00378 247 SAVFP--------------------GLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFK 301 (402)
T ss_pred HHhCc--------------------cccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence 32211 11235666777777777776655456777888999999999999875 543
No 146
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.91 E-value=2.1e-22 Score=191.37 Aligned_cols=259 Identities=18% Similarity=0.199 Sum_probs=185.7
Q ss_pred CCCeEEeccCCC-CC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAAT-SQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~-~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
|..++.+..+.+ ++ .++.+++++.+++..+.... +.+....+..+..+++++.++++++.+ +.++++++++++
T Consensus 38 g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~g~~~~~~~l~~~la~~~~~~---~~i~~~~g~~~~ 112 (385)
T PRK05958 38 GRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGS--GGSRLVTGNSPAHEALEEELAEWFGAE---RALLFSSGYAAN 112 (385)
T ss_pred CceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCC--CCcCcccCCcHHHHHHHHHHHHHhCCC---cEEEECcHHHHH
Confidence 456666666543 43 67899999999987643211 111111123456778999999999953 445555566777
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISN 219 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n 219 (368)
..++.++ +++||.|++.++.|++.... ++..|++++.++.. |++.+++.+++ ++++++++++.|
T Consensus 113 ~~~l~~~----~~~gd~V~~~~~~~~~~~~~----~~~~g~~~~~~~~~-----d~~~l~~~i~~~~~~~~lvi~~~~~~ 179 (385)
T PRK05958 113 LAVLTAL----AGKGDLIVSDKLNHASLIDG----ARLSRARVRRYPHN-----DVDALEALLAKWRAGRALIVTESVFS 179 (385)
T ss_pred HHHHHHh----CCCCCEEEEeCccCHHHHHH----HHhcCCceEEeCCC-----CHHHHHHHHHhccCCCeEEEEEeccc
Confidence 7777776 89999999999998886543 34568888888764 88999998865 367788888999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCccc------c---cCCCCCccEEEecCcCcCCCCcceEEEEcccccccC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV------V---DVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAM 290 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~------~---~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l 290 (368)
++|...++++|.++|++||+++|+|++|+.+... . .+.....++++.|+||.+|+.| |+++.++++++.+
T Consensus 180 ~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~ 258 (385)
T PRK05958 180 MDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG-AAVLGSETLIDYL 258 (385)
T ss_pred CCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC-cEEEcCHHHHHHH
Confidence 9999999999999999999999999999865432 1 1222335588999999999887 8888888776654
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...... ..+ .+..+..+.+++.++++.+... +.+.++..++.+++.+.|.+.
T Consensus 259 ~~~~~~------------------~~~-~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 259 INRARP------------------FIF-TTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL 310 (385)
T ss_pred HHhCcc------------------cee-cCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 321100 001 1235556677777888877653 677888999999999988764
No 147
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=2.9e-23 Score=194.31 Aligned_cols=224 Identities=21% Similarity=0.267 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHcCCC-----CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE
Q 017640 113 YELARKKVAAFINAS-----DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (368)
Q Consensus 113 ~~~~r~~la~~~~~~-----~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 187 (368)
..++++.++++++.. ...++++++|+++++..++.++ .++||+|+++.++|++... .++..|.+++.
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~----~~~g~~vl~~~~~~~~~~~----~~~~~~~~~~~ 109 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL----LNPGDEVLVPDPTYPGYEA----AARLAGAEVVP 109 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh----CCCCCEEEEcCCCchhHHH----HHHHCCCEEEE
Confidence 345666666666544 1348999999999999999988 7889999999999988544 44566999999
Q ss_pred EeCCCCCCCCH--HHHHHhcccCceEEEEcccccccccccCHHH---HHHHHHhcCCEEEEecCCcCCcc----c---cc
Q 017640 188 LNLNDDESPDL--DKLKEMLSRKTKLVVIHHISNMLASILPIEE---IVHWSHDVGAKVLVDACQSVPHM----V---VD 255 (368)
Q Consensus 188 v~~~~~~~~d~--~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~---i~~l~~~~g~~li~D~a~~~~~~----~---~~ 255 (368)
++.++++..+. +.++....+++++|++++++||||.++|+++ |.++|+++|+++|+|++|+.+.. . ..
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~ 189 (350)
T cd00609 110 VPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALAL 189 (350)
T ss_pred EecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCcccccccC
Confidence 99987776665 6777777789999999999999999999554 45899999999999999985432 1 12
Q ss_pred CCCCCccEEEecCcCcCCCCc--ceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 256 VQGLDADFLVASSHKMCGPTG--IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 256 ~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
....+.|++++|++|.++.+| +|++++++ ++++.++... ++..++++.....++..
T Consensus 190 ~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~ 248 (350)
T cd00609 190 LDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLL---------------------PYTTSGPSTLSQAAAAA 248 (350)
T ss_pred cCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHH---------------------HhcccCCChHHHHHHHH
Confidence 344568999999999877444 89999999 6777665332 12234778888888888
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 333 AIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 333 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+++... .+.++++++..++++++.+.|.+....
T Consensus 249 ~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~ 281 (350)
T cd00609 249 ALDDGE-EHLEELRERYRRRRDALLEALKELGPL 281 (350)
T ss_pred HHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 887664 457889999999999999999887543
No 148
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=2.7e-22 Score=204.82 Aligned_cols=285 Identities=16% Similarity=0.119 Sum_probs=216.5
Q ss_pred CCeEEeccCCCCC----CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 66 KKLVYLDNAATSQ----KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 66 ~~~i~l~~~~~~~----~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
++.+|+++.+.|. .|+.+.+++.+....+..+... ....+++..+.+.+++..+++++|++.. ++.++.++|++
T Consensus 100 kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPY-qaEisQG~lqal~~~Qt~ia~LtG~~~a-naSL~d~aTAa 177 (993)
T PLN02414 100 KNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPY-QAEIAQGRLESLLNYQTMITDLTGLPMS-NASLLDEGTAA 177 (993)
T ss_pred cCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHhCCChh-hEeecCChHHH
Confidence 3445777766665 7888878887666544333211 2234567788899999999999999876 99999999999
Q ss_pred HHHHHHHccCCCCCC--CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc
Q 017640 142 INLVAYSWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~--gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
.+.++++++ +++ +++|++++.+|+++...++..++..|++++.++.+... ...+.+..+ +.+..|
T Consensus 178 aea~~~a~~---~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~~---------~~~~~v~~v-lvq~P~ 244 (993)
T PLN02414 178 AEAMAMCNN---ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDFD---------YSSGDVCGV-LVQYPA 244 (993)
T ss_pred HHHHHHHHh---cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhhc---------cccCceEEE-EEecCC
Confidence 999988873 554 47899999999999999999999999999999874211 112233333 345556
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-cCCCCCccEEEecCcCcCCCCc-----ceEEEEcccccccCCCc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGLDADFLVASSHKMCGPTG-----IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~~~~~~d~~~~s~~K~~g~~G-----~G~l~~~~~li~~l~~~ 293 (368)
.+|.+.|+++|.++||++|+++++ +++.++...+ +..++++|+++++.||+.+|.| .|++++++++.+.+.+.
T Consensus 245 ~~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~GGP~aGflavr~~~~r~~Pgr 323 (993)
T PLN02414 245 TDGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRLMPGR 323 (993)
T ss_pred CCeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCCCCCCeeEEEECHHHHhhCCCc
Confidence 799999999999999999999999 8888877777 4778899999999999874333 89999999998766667
Q ss_pred ccCCcceeecccC---CCCCCCCCCCCCCCCCCHHHHHHHHHHHH-----HHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 294 LGGGEMISDVFLD---HSTFADPPSRFEAGTPAIGEAIGLGAAID-----YLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 294 ~~g~~~~~~~~~~---~~~~~~~~~~~~~gt~~~~~~~a~~~al~-----~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+.||+........ .....+.+.||+.||.|+.+..++.+++. ++...|++++++++.+++.++.+.|.+ .|
T Consensus 324 iVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~-~G 402 (993)
T PLN02414 324 IIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK-LG 402 (993)
T ss_pred ccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh-cC
Confidence 8888432111000 12235567899999999977777776664 334479999999999999999999976 46
Q ss_pred CC
Q 017640 366 TT 367 (368)
Q Consensus 366 ~t 367 (368)
++
T Consensus 403 ~~ 404 (993)
T PLN02414 403 FQ 404 (993)
T ss_pred Cc
Confidence 54
No 149
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.91 E-value=1.7e-22 Score=192.82 Aligned_cols=260 Identities=15% Similarity=0.118 Sum_probs=188.3
Q ss_pred CCCeEEeccCC-CC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAA-TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~-~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
|+.+++|..+. .+ +.++.+.+++.+.+..... .+ ..+....+..+..+++++.+++++|.+ ++|++|+| ++++
T Consensus 41 g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~-~~-~~~~~~~G~~~l~~~l~~~la~~~g~~--~~i~~tsG-~~a~ 115 (397)
T PRK06939 41 GKEVINFCANNYLGLANHPELIAAAKAALDSHGF-GM-ASVRFICGTQDLHKELEEKLAKFLGTE--DAILYSSC-FDAN 115 (397)
T ss_pred CCeEEEeeccCccccCCCHHHHHHHHHHHHHcCC-CC-cccccccCCcHHHHHHHHHHHHHhCCC--cEEEEcCh-HHHH
Confidence 46678887765 34 3688899999988876421 10 011111223566778999999999975 37777777 7789
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEcc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHH 216 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~ 216 (368)
..++.++ +++||+|++.+|.|++.... ++..|++++.++. .|++++++.+++ ++++|++++
T Consensus 116 ~~~~~~l----~~~gd~vi~~~~~~~~~~~~----~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~ 182 (397)
T PRK06939 116 GGLFETL----LGKEDAIISDALNHASIIDG----VRLCKAKRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDG 182 (397)
T ss_pred HHHHHHh----CCCCCEEEEEhhhhHHHHHH----HHhcCCceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEec
Confidence 8888887 89999999999999886543 3455888877765 388888887753 678899999
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc------cCCC--CCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV------DVQG--LDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~------~~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
.+|++|...++++|.++|++||+++|+|++|+.+.... .... .++|++++|+||.+++..+||+++++++++
T Consensus 183 v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~r~G~v~~~~~~~~ 262 (397)
T PRK06939 183 VFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGASGGYTAGRKEVID 262 (397)
T ss_pred CcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCccCceEEEeCHHHHH
Confidence 99999999999999999999999999999997553311 1111 247899999999874334699999998887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+....... ...++++....+++..+++++.. .+.++++..++.+++.+.|.+.
T Consensus 263 ~l~~~~~~~-------------------~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 316 (397)
T PRK06939 263 WLRQRSRPY-------------------LFSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMTAA 316 (397)
T ss_pred HHHHhCccc-------------------cccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc
Confidence 765321100 01224455556667777777754 3677888889999999988765
No 150
>PLN02231 alanine transaminase
Probab=99.91 E-value=1.6e-22 Score=197.76 Aligned_cols=228 Identities=16% Similarity=0.171 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHHHHHHHHHHHccCCCC-CCCCEEEEcCCCCcccHHHHHHHHHHcCC
Q 017640 110 TDEYELARKKVAAFI----NAS-DSGEIVFTKNATEAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQKTGA 183 (368)
Q Consensus 110 ~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 183 (368)
.....++|+.+++++ |.+ .+++|++|+|+++++.+++.++ + .+||.|+++.|.|+. +...++..|+
T Consensus 167 s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l----~~~~gd~Vli~~P~Y~~----y~~~~~~~g~ 238 (534)
T PLN02231 167 SQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLL----IRSEKDGILCPIPQYPL----YSASIALHGG 238 (534)
T ss_pred CCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHh----ccCCCCEEEEeCCCChh----HHHHHHHcCC
Confidence 444557777777776 332 2359999999999999999988 6 479999999998877 4445566799
Q ss_pred EEEEEeCCCC--CCCCHHHHHHhccc------CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc
Q 017640 184 NLKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM 252 (368)
Q Consensus 184 ~v~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~ 252 (368)
+++.++++++ |.+|+++|++++++ +++++++++|+||||.+++ +++|+++|++||++||+|++|..-..
T Consensus 239 ~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y 318 (534)
T PLN02231 239 TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVY 318 (534)
T ss_pred EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhccc
Confidence 9999999853 78999999998865 6899999999999999999 77899999999999999999873111
Q ss_pred -------cc-cCC------CCC-ccEEEecCcC-cCCCCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCC
Q 017640 253 -------VV-DVQ------GLD-ADFLVASSHK-MCGPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFA 311 (368)
Q Consensus 253 -------~~-~~~------~~~-~d~~~~s~~K-~~g~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~ 311 (368)
++ .+. ..+ ..+++.|+|| ++|.+| +||+.+ ++++++.+.....
T Consensus 319 ~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~---------------- 382 (534)
T PLN02231 319 VPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS---------------- 382 (534)
T ss_pred CCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh----------------
Confidence 11 110 011 3467789999 458788 999986 5677766543221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHH-------HHHHh--CHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 312 DPPSRFEAGTPAIGEAIGLGAAID-------YLSTI--GMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 312 ~~~~~~~~gt~~~~~~~a~~~al~-------~~~~~--g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.. .+++..+..++..+++ .+... ..+.+++..++.++++.+.|.+.+|++
T Consensus 383 -----~~-~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~ 441 (534)
T PLN02231 383 -----VN-LCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVT 441 (534)
T ss_pred -----hh-cCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 01 1344555555555552 11111 134566778888888888888776654
No 151
>PRK05839 hypothetical protein; Provisional
Probab=99.91 E-value=1.7e-22 Score=191.05 Aligned_cols=211 Identities=17% Similarity=0.184 Sum_probs=149.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~ 143 (368)
.+++.|+.+.+. +.++.+.+++.+.......++.. .+..++.+.+.+.+++..|.+ .+++|++|+|+++++.
T Consensus 24 ~~~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~Y~~~------~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~ 97 (374)
T PRK05839 24 YKGLDLTIGEPQFETPKFIQDALKNNAHLLNKYPKS------AGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF 97 (374)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHhhccCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 478999998876 56777888877654432222211 111233333444444444643 3359999999999999
Q ss_pred HHHHHccCCCC-CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEcccccc
Q 017640 144 LVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 144 ~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
.++.++ .. ++||.|++++|.|+. +...++..|++++.++.+++ +.+|+.+.+ + +++++|++++|+||
T Consensus 98 ~~~~~~---~~~~~gd~vlv~~P~y~~----~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NP 167 (374)
T PRK05839 98 NFPQFV---LFDKQNPTIAYPNPFYQI----YEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNP 167 (374)
T ss_pred HHHHHH---hcCCCCCEEEECCCCchh----hHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCC
Confidence 988876 12 579999999997777 44445677999999999743 555554332 3 46899999999999
Q ss_pred cccccC---HHHHHHHHHhcCCEEEEecCCcCCc----c-c-ccC------CCCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 221 LASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M-V-VDV------QGLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 221 tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~-~-~~~------~~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
||.+++ +++|+++|++||+++|+|++|..-. . . ... ...+..+++.|+||.||.+| +||++.+
T Consensus 168 TG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~ 247 (374)
T PRK05839 168 TGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD 247 (374)
T ss_pred cCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC
Confidence 999999 6788888999999999999987311 1 1 111 12246689999999999888 9999999
Q ss_pred ccccccCCC
Q 017640 284 SDLLSAMPP 292 (368)
Q Consensus 284 ~~li~~l~~ 292 (368)
+++++.+..
T Consensus 248 ~~~~~~~~~ 256 (374)
T PRK05839 248 ASILKKYKA 256 (374)
T ss_pred HHHHHHHHH
Confidence 888876653
No 152
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.91 E-value=2.6e-22 Score=190.80 Aligned_cols=257 Identities=21% Similarity=0.220 Sum_probs=186.2
Q ss_pred CCCeEEeccCC-CCC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAA-TSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~-~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
|++++.|..+. .+. .++.+.+++.+.+..+.... +.+....+..+..+++++.+++++|.+ ..+++++| ++++
T Consensus 32 g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~g~~~l~~~l~~~l~~~~g~~--~~i~~~sG-~~a~ 106 (385)
T TIGR01825 32 GKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGA--GAVRTIAGTLRLHEELEEKLAKFKKTE--AALVFQSG-FNTN 106 (385)
T ss_pred CceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCC--CccCcccCCcHHHHHHHHHHHHHhCCC--cEEEECcH-HHHH
Confidence 36677777665 454 78899999988877542111 111112233567788999999999964 36777666 6677
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc----CceEEEEcccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHIS 218 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~ 218 (368)
..++.++ +++||.|++.++.|++....+ ...|++++.++ .+|++++++.+.+ ++++|++++++
T Consensus 107 ~~a~~~~----~~~gd~vi~~~~~~~~~~~~~----~~~g~~~~~~~-----~~d~~~l~~~l~~~~~~~~~~v~~~~v~ 173 (385)
T TIGR01825 107 QGVLSAL----LRKGDIVLSDELNHASIIDGL----RLTKATKKIYK-----HADMDDLDRVLRENPSYGKKLIVTDGVF 173 (385)
T ss_pred HHHHHHh----CCCCCEEEEEccccHHHHHHH----HhcCCceEEeC-----CCCHHHHHHHHHhhccCCCeEEEEecCC
Confidence 7888877 889999999999888865433 34577776664 3478888887653 68899999999
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEccccccc
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~ 289 (368)
|+||.+.|+++|.++|++||+++|+|++|+.+... +++. .+.|+++.|+||.+|+.| |+++.++++++.
T Consensus 174 ~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g-G~~~~~~~~~~~ 251 (385)
T TIGR01825 174 SMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG-GYAAGHKELIEY 251 (385)
T ss_pred cCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC-CEEecCHHHHHH
Confidence 99999999999999999999999999999865432 2232 468899999999998776 899888888776
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+..... .+. .++.+...++++.++++.+.+. ..+.++..++.+++.+.|.+.
T Consensus 252 ~~~~~~--------------------~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 304 (385)
T TIGR01825 252 LKNRAR--------------------PFLFSTAQPPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLGKL 304 (385)
T ss_pred HHHhCc--------------------cccccCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 543211 111 1234556677888888876552 346677778888888888764
No 153
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=2.3e-22 Score=206.11 Aligned_cols=281 Identities=15% Similarity=0.098 Sum_probs=214.1
Q ss_pred EEeccCCCCCC-cHHHHHHHHHHHHHhhcc-CCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 69 VYLDNAATSQK-PIAVLKALQNYYEAYNSN-VHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 69 i~l~~~~~~~~-~~~v~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
.|++.+.++.. |+.+.+.+.+.-..+..+ |+ +...+++..+.+.+++..+++++|++.. ++.++.++|++.+.++
T Consensus 79 ~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPy--Q~EisQG~Leal~~~Qt~la~LtG~~~a-naSl~d~aTAa~ea~~ 155 (954)
T PRK05367 79 SYIGQGYYGTHTPPVILRNILENPAWYTAYTPY--QPEISQGRLEALLNFQTMVADLTGLEIA-NASLLDEATAAAEAMA 155 (954)
T ss_pred cccCCCCCCCcCcHHHHHHHHhCcchhhccCCC--ChHHHHHHHHHHHHHHHHHHHHHCCChh-hccccccHHHHHHHHH
Confidence 47888888754 444546555432222222 32 2236777889999999999999999876 8999999999999999
Q ss_pred HHccCCCCCC--CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 147 YSWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 147 ~~~~~~~~~~--gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
.+++ +++ +++|++++.+|+++...++..++..|++++.++.+.+ ++ .+++..+++.. .|.+|.+
T Consensus 156 ~a~~---~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d----~~------~~~~~~vlvq~-p~~~G~i 221 (954)
T PRK05367 156 LAKR---VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA----LD------HDDVFGVLLQY-PGTSGEV 221 (954)
T ss_pred Hhhh---hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC----CC------cccEEEEEEec-CCCCeee
Confidence 8873 555 4899999999999999999999999999999997542 11 23454554444 5889999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-----CCCCcceEEEEcccccccCCCcccCCcc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-----~g~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
.|+++|+++||++|+++++|+.+.......+..++++|++++|.||+ ||+||.|++++++++.+.+.+.+.||+.
T Consensus 222 ~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~ 301 (954)
T PRK05367 222 RDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSV 301 (954)
T ss_pred ccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeec
Confidence 99999999999999999999987544444467888999999999998 7777899999999999999989888753
Q ss_pred eeeccc---CCCCCCCCCCCCCCCCCCHHHHHHHHHHH-----HHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 300 ISDVFL---DHSTFADPPSRFEAGTPAIGEAIGLGAAI-----DYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 300 ~~~~~~---~~~~~~~~~~~~~~gt~~~~~~~a~~~al-----~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
...... ......+.+.||+.||.|+....++.+.+ .++...|++++.+++..++.++.+.|.+ .|++
T Consensus 302 d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~ 376 (954)
T PRK05367 302 DAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLE 376 (954)
T ss_pred ccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcc
Confidence 211110 01223445678999999998654444433 5577789999999999999999999976 5654
No 154
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.91 E-value=5.6e-23 Score=195.34 Aligned_cols=169 Identities=24% Similarity=0.348 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.+++++|.+ ..++++|++.|+.+++.++ +++||+|++..+.|..++..+...++..|++++.++
T Consensus 64 ~p~~~~le~~lA~l~g~~---~~i~~~sG~~Al~~~l~~l----l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd 136 (403)
T PRK07503 64 NPTLALLEQRMASLEGGE---AAVALASGMGAITATLWTL----LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVD 136 (403)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeC
Confidence 445678999999999986 3466667788999999887 899999999999988777666666777899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++.+++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.....+ ..+.|+++.|++
T Consensus 137 ~~-----d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~~~~~~~l-~~g~Di~v~S~t 210 (403)
T PRK07503 137 LT-----DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCTPYLQRPL-ELGADLVVHSAT 210 (403)
T ss_pred CC-----CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEcccc
Confidence 75 899999999999999999999999999999999999999999999999999866442222 357899999999
Q ss_pred CcCCCCc---ceEEEEcccccccCC
Q 017640 270 KMCGPTG---IGFLFGKSDLLSAMP 291 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~~l~ 291 (368)
|++|++| +|+++.+++++++++
T Consensus 211 K~l~g~gd~~gG~v~~~~~l~~~l~ 235 (403)
T PRK07503 211 KYLGGHGDITAGLVVGGKALADRIR 235 (403)
T ss_pred ccccCCCceeEEEEEcCHHHHHHHH
Confidence 9988765 788888888777665
No 155
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.91 E-value=4.4e-23 Score=195.27 Aligned_cols=220 Identities=19% Similarity=0.227 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.+|+++|.+ ..++++|+++|+..++.++ +++||+|+++.+.|.+.+..+...+...|+++++++
T Consensus 58 ~p~~~~le~~lA~l~g~~---~av~~~sG~~Ai~~~l~al----~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd 130 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTE---AAVATSSGMGAIAATLLTI----LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFIN 130 (391)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEEC
Confidence 345668999999999986 3577888889999999888 889999999999999888778887888899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++++.+.....+ ..+.|+++.|++
T Consensus 131 ~~-----d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~~~~~~~~-~~g~Divv~S~s 204 (391)
T TIGR01328 131 MA-----IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFATPMLTNPV-ALGVDVVVHSAT 204 (391)
T ss_pred CC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCchhccCCch-hcCCCEEEcccc
Confidence 76 899999999999999999999999999999999999999999999999999876543222 357999999999
Q ss_pred CcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTP-AIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~-~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|.+|++| .|+++.++++++.++..... ....+.. +.... .++.-++. +...
T Consensus 205 K~lgg~g~~~gG~v~~~~~li~~l~~~~~~-------------------~~~g~~l~~~~a~----l~l~~L~t--l~~r 259 (391)
T TIGR01328 205 KYIGGHGDVVAGLICGKAELLQQIRMVGIK-------------------DMTGSVISPFDAW----LILRGLKT--LNIR 259 (391)
T ss_pred ccccCCCCceEEEEEcCHHHHHHHHHHHHH-------------------hCCCCCCCcHHHH----HHHhCcCc--HHHH
Confidence 9998766 58888888887766532100 0000111 12221 12222222 3444
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC
Q 017640 346 HAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.++..+++.++.++|+++++++
T Consensus 260 ~~~~~~na~~la~~L~~~p~v~ 281 (391)
T TIGR01328 260 MKRHSENAMKVAEYLKSHPAVE 281 (391)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 6777888888999998887643
No 156
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.91 E-value=4.8e-23 Score=193.72 Aligned_cols=216 Identities=11% Similarity=0.092 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
....+++.++++.+.. ++++++|+++|+..++.++ +++||+|++.++.|.+....+....+..|+++.+++..
T Consensus 62 t~~~Le~~iA~le~~~---~~~~~~sG~~Ai~~~l~al----l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~ 134 (394)
T PRK09028 62 THFAFQAAIVELEGGA---GTALYPSGAAAISNALLSF----LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM 134 (394)
T ss_pred hHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC
Confidence 3558999999998764 6789999999999999988 89999999999999887765555667789999888654
Q ss_pred CCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc
Q 017640 192 DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM 271 (368)
Q Consensus 192 ~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 271 (368)
+.+.+++++++++++|++++++||||.+.|+++|+++||+||+++++|++|+.+.. ....++++|+++.|.+|+
T Consensus 135 -----~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~p~~-~~Pl~~GaDivv~S~tK~ 208 (394)
T PRK09028 135 -----IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-SRPFEMGVDISIQAATKY 208 (394)
T ss_pred -----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCcccccc-CCccccCceEEEEeCCeE
Confidence 56889999999999999999999999999999999999999999999999998753 333467899999999998
Q ss_pred CCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 017640 272 CGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (368)
Q Consensus 272 ~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~ 348 (368)
++++| .|+++.++++.+.++..... ..++.+... +...++-+++ +....++
T Consensus 209 l~Gh~d~~~G~~~~~~~~~~~l~~~~~~---------------------~G~~~~p~~---a~l~~rgl~T--L~lR~~~ 262 (394)
T PRK09028 209 IVGHSDVMLGTATANEKHWDQLREHSYL---------------------MGQCTSPDD---VYLAMRGLRT--LGVRLAQ 262 (394)
T ss_pred ecCCCCEEEEEEECCHHHHHHHHHHHHh---------------------cCCCCCHHH---HHHHHcccCc--HHHHHHH
Confidence 87665 77776666654444322110 011222211 1111222222 4455567
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 017640 349 EVKWIICSIIVIQERHNT 366 (368)
Q Consensus 349 ~~~l~~~l~~~l~~~~g~ 366 (368)
..+.+..+.++|++++.+
T Consensus 263 ~~~na~~la~~L~~~p~v 280 (394)
T PRK09028 263 HEKNALKVANWLATRPEV 280 (394)
T ss_pred HHHHHHHHHHHHhcCCCc
Confidence 778888888889888753
No 157
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=2.9e-22 Score=186.58 Aligned_cols=243 Identities=15% Similarity=0.143 Sum_probs=175.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFIN---ASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~---~~~~~~v~~t~g~t 139 (368)
.+.+.|+.+.+. ++|+.+++++.+.+.. ...++.. ...++|++++++++ .++ ++|++|+|++
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~-----------~~~~Lr~aia~~~~~~~~~~-~~i~it~Ga~ 86 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIYYDS-----------PDEELIEKILSYLDTDFLSK-NNVSVGNGAD 86 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcCCCC-----------ChHHHHHHHHHHhCCCCCCc-ceEEEcCCHH
Confidence 578999999877 6788999998887643 1111211 23479999999998 544 4999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
+++..++.++ |.|++.+|+|+. +...++..|++++.++.++++.++... + .+++++++++|+|
T Consensus 87 ~~i~~~~~~~--------d~v~v~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~~~----~-~~~~~i~i~nP~N 149 (335)
T PRK14808 87 EIIYVMMLMF--------DRSVFFPPTYSC----YRIFAKAVGAKFLEVPLTKDLRIPEVN----V-GEGDVVFIPNPNN 149 (335)
T ss_pred HHHHHHHHHh--------CcEEECCCCHHH----HHHHHHHcCCeEEEecCCCcCCCChhH----c-cCCCEEEEeCCCC
Confidence 9999999865 569999996665 677778889999999998777665332 2 3568999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCc--cccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPH--MVVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~--~~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~ 294 (368)
|||.+++.+++.+++ +++++||+|++|..-. .... +......+++.|+||.||.+| +||+++++++++.+....
T Consensus 150 PTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~ 228 (335)
T PRK14808 150 PTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVR 228 (335)
T ss_pred CCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHhc
Confidence 999999999999998 5899999999987211 1111 122346789999999999888 999999999887765433
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.. .+.+..+..++..+++.... .....++..+..+++.+.|.+.
T Consensus 229 ~~-----------------------~~~~~~~q~a~~~~l~~~~~--~~~~~~~~~~~r~~l~~~L~~~ 272 (335)
T PRK14808 229 LP-----------------------FNVSYVSQMFAKVALDHREI--FEERTKFIVEERERMKSALREM 272 (335)
T ss_pred CC-----------------------CCCCHHHHHHHHHHHhCHHH--HHHHHHHHHHHHHHHHHHHHHC
Confidence 11 12344555555666653222 2333444555566777777664
No 158
>PLN02483 serine palmitoyltransferase
Probab=99.91 E-value=4.8e-22 Score=193.11 Aligned_cols=262 Identities=18% Similarity=0.190 Sum_probs=184.2
Q ss_pred CCeEEeccCCCC---CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS---QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.+.++|....+- ..++...+++.+++..+..... .....++..+..+++++.+|+++|.+ +.|++++| ..++
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~--~sr~~~g~~~~~~ele~~lA~~~g~~--~ai~~~~G-~~an 174 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTC--SSRVDGGTTKLHRELEELVARFVGKP--AAIVFGMG-YATN 174 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCC--ccccccCCcHHHHHHHHHHHHHhCCC--cEEEECCH-HHHH
Confidence 445666554432 2244556666666666533221 12222334677889999999999975 36777665 4566
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-------cCc-----e
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-------RKT-----K 210 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-------~~~-----~ 210 (368)
..++.++ +++||.|++.+++|++... .++..|++++.++.+ |++++++.++ +++ +
T Consensus 175 ~~~i~al----~~~Gd~Vi~d~~~h~s~~~----~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k 241 (489)
T PLN02483 175 STIIPAL----IGKGGLIISDSLNHNSIVN----GARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKK 241 (489)
T ss_pred HHHHHHh----CCCCCEEEEcchhhHHHHH----HHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCce
Confidence 6777777 8999999999999999654 356679999999975 5666665543 222 4
Q ss_pred -EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEE
Q 017640 211 -LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFL 280 (368)
Q Consensus 211 -~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l 280 (368)
+|++++..|++|.+.++++|.++|++||+++++|++|+.+... +++...+.|++++|+||.||+.| ||+
T Consensus 242 ~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G-G~i 320 (489)
T PLN02483 242 IIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG-GYI 320 (489)
T ss_pred EEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc-eEE
Confidence 6677788899999999999999999999999999999865421 22333468999999999999887 999
Q ss_pred EEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-C---HHHHHHHHHHHHHHH
Q 017640 281 FGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-G---MQKIHAYEVKWIICS 356 (368)
Q Consensus 281 ~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g---~~~i~~~~~~l~~~l 356 (368)
++++++++.++....+. ...++.+.....++.++++.+... + .....++.+++.+++
T Consensus 321 ~~~~~li~~l~~~~~~~-------------------~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l 381 (489)
T PLN02483 321 AGSKELIQYLKRTCPAH-------------------LYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFF 381 (489)
T ss_pred EcCHHHHHHHHHhCccc-------------------cccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHH
Confidence 99999988876543211 112244555555667778877632 1 234467788889999
Q ss_pred HHHHHhhcCC
Q 017640 357 IIVIQERHNT 366 (368)
Q Consensus 357 ~~~l~~~~g~ 366 (368)
.+.|+++ |+
T Consensus 382 ~~~L~~~-G~ 390 (489)
T PLN02483 382 RSELQKM-GF 390 (489)
T ss_pred HHHHHHC-CC
Confidence 9999876 54
No 159
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.91 E-value=4.1e-23 Score=194.77 Aligned_cols=260 Identities=21% Similarity=0.242 Sum_probs=181.1
Q ss_pred CeEEeccCCCCCC-----cHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEe
Q 017640 67 KLVYLDNAATSQK-----PIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFT 135 (368)
Q Consensus 67 ~~i~l~~~~~~~~-----~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t 135 (368)
++|+|+.+.+... ++.+.++..+....... ...+.......++|++++++++ .+++.+|+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~ 74 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSS-------FLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVT 74 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTG-------CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEE
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccc-------cccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEe
Confidence 4678888877643 34444444430111100 1111123345589999999998 3332389999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhccc------
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR------ 207 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~------ 207 (368)
+|+.+++..+...+ ..++|+.|++.+|.|+. +...++..|++++.++++ .++.+|++.|++.+++
T Consensus 75 ~G~~~~~~~~~~~~---~~~~~~~vlv~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 147 (363)
T PF00155_consen 75 SGAQAALFLLLRLL---KINPGDTVLVPDPCYPS----YIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGP 147 (363)
T ss_dssp SHHHHHHHHHHHHH---HSSTTSEEEEEESSSTH----HHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTE
T ss_pred cccccchhhhhhcc---cccccccceecCCcccc----ccccccccCceeeecccccccccccccccccccccccccccc
Confidence 99999988888776 25689999999998888 455566779999999965 5688899999999987
Q ss_pred CceEEEEcccccccccccCH---HHHHHHHHhcCCEEEEecCCcCCccc--------ccCCCCCccEEEecCcCcCCCCc
Q 017640 208 KTKLVVIHHISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPHMV--------VDVQGLDADFLVASSHKMCGPTG 276 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l---~~i~~l~~~~g~~li~D~a~~~~~~~--------~~~~~~~~d~~~~s~~K~~g~~G 276 (368)
++++|++++++||||..++. ++|+++|++||+++|+|++|...... ..++.....+++.|++|.||.+|
T Consensus 148 ~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~G 227 (363)
T PF00155_consen 148 RPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPG 227 (363)
T ss_dssp TEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGG
T ss_pred ccceeeecccccccccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccc
Confidence 57899999999999999995 45555599999999999999854332 12222223689999999999888
Q ss_pred --ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHH
Q 017640 277 --IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKIHAYEVKW 352 (368)
Q Consensus 277 --~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~--g~~~i~~~~~~l 352 (368)
+|++++++++++.++.....+ ..+.....++...+...... -.++++++.++.
T Consensus 228 lRvG~i~~~~~~~~~l~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 284 (363)
T PF00155_consen 228 LRVGYIVAPPELIERLRRFQRSG-----------------------LSSSPMQAAAAAALSDPELVEKWLEELRERLREN 284 (363)
T ss_dssp GTEEEEEEEHHHHHHHHHHHHHT-----------------------TSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhhhhhccccc-----------------------cccchhhHHHHHhhhcccccccccccchhhHHHH
Confidence 999999998888776443211 12444444444444433321 357788888888
Q ss_pred HHHHHHHHHhh
Q 017640 353 IICSIIVIQER 363 (368)
Q Consensus 353 ~~~l~~~l~~~ 363 (368)
.+++.+.|.+.
T Consensus 285 ~~~l~~~L~~~ 295 (363)
T PF00155_consen 285 RDLLREALEEI 295 (363)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 88999988776
No 160
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=1.3e-22 Score=193.78 Aligned_cols=161 Identities=19% Similarity=0.296 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.+|++.|.. ..++++|+++|+.+++.++ +++||+|+++..+|.++...+...+++.|++++++
T Consensus 62 ~~p~~~~le~~lA~l~g~~---~av~~sSGt~Al~~al~~l----l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v 134 (433)
T PRK08134 62 SNPTVAVLEERVAALEGGV---GAIATASGQAALHLAIATL----MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFV 134 (433)
T ss_pred cChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH----hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEE
Confidence 3456778999999999986 3588999999999999988 88999999999999988777666667789999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.+ |+++++++|+++|++|++++++||+|.+.|+++|+++|++||+++++|++++.+.....+ .+++|+++.|.
T Consensus 135 d~~-----d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl-~~GaD~vv~S~ 208 (433)
T PRK08134 135 KPG-----DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPF-EHGADLVYHSA 208 (433)
T ss_pred CCC-----CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCEEEecc
Confidence 975 899999999999999999999999999999999999999999999999999988775444 67899999999
Q ss_pred cCcCCCCc--ceEEEE
Q 017640 269 HKMCGPTG--IGFLFG 282 (368)
Q Consensus 269 ~K~~g~~G--~G~l~~ 282 (368)
+|++|++| +|.+++
T Consensus 209 tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 209 TKFLGGHGTAIGGVLV 224 (433)
T ss_pred ccccCCCCCceEEEEE
Confidence 99999888 454544
No 161
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=3.8e-23 Score=193.05 Aligned_cols=244 Identities=12% Similarity=0.072 Sum_probs=173.7
Q ss_pred CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC
Q 017640 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG 157 (368)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g 157 (368)
.+++.+++++.+..... . .+...+..+++++.+++++| + +++++++|+|+++..++.++ +++|
T Consensus 9 ~~~~~v~~a~~~~~~~~------~----~~~~~~~~~~l~~~~a~~~g-~--~~~~~~~~gt~a~~~~~~~l----~~~g 71 (338)
T cd06502 9 GPTPEMLEAMAAANVGD------D----VYGEDPTTAKLEARAAELFG-K--EAALFVPSGTAANQLALAAH----TQPG 71 (338)
T ss_pred CCCHHHHHHHHhcccCC------c----ccCCCHHHHHHHHHHHHHhC-C--CeEEEecCchHHHHHHHHHh----cCCC
Confidence 57888999887764321 0 01113456789999999999 3 37888888899999999988 7899
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-------CceEEEEcccccccccccC---H
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-------KTKLVVIHHISNMLASILP---I 227 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------~~~~v~~~~~~n~tG~~~~---l 227 (368)
|+|+++++.|.+..... ..++..|++++.++.+. +.+|+++|++++++ ++++|++++++|+ |.+++ +
T Consensus 72 d~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l 148 (338)
T cd06502 72 GSVICHETAHIYTDEAG-APEFLSGVKLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDEL 148 (338)
T ss_pred CeEEEecCcceeeecCC-cHHHHcCceEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHH
Confidence 99999999998765321 22344699999999754 77899999999975 6899999999997 55545 6
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCc-----ccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceee
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPH-----MVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~-----~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~ 302 (368)
++|.++|++||+++++|++|..+. ..+.....+.|+++.|+||++|.+|.++++.++++++.+++....+
T Consensus 149 ~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g~~~~~~~~~~~~~~~~~~~~----- 223 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQA----- 223 (338)
T ss_pred HHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCCEEEEeccccCCCccceEEECCHHHHHHHHHHHHHh-----
Confidence 789999999999999999874221 1121112368899999999999777566677888888776543211
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.++.+..++. ...++..++..+.....++..++++++.+.|+++
T Consensus 224 ----------------~~~~~~~~~~-~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~ 267 (338)
T cd06502 224 ----------------GGGMRQSGFL-AAAGLAALENDLWLRRLRHDHEMARRLAEALEEL 267 (338)
T ss_pred ----------------CCChhhHHHH-HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 0122222222 2333344444345556678888889999999876
No 162
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.91 E-value=8.5e-23 Score=193.79 Aligned_cols=218 Identities=20% Similarity=0.195 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.+++.++++.|.+. . ++++|+++++.+++.++ +++||+|++..+.|.+....+...++..|.+++.++
T Consensus 59 ~p~~~~Le~~lA~l~g~~~--~-v~~~sG~~Ai~~~l~al----l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~ 131 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAG--G-VITATGMGAINLVLNAL----LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITAD 131 (405)
T ss_pred ChHHHHHHHHHHHHhCCCc--e-EEEcCHHHHHHHHHHHH----hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEEC
Confidence 3445679999999999752 4 55666689999999988 899999999999999887777777777888998887
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |+++|++++++++++|++++++||||.+.++++|.++|+++|+++++|++|+.+.....+ .++.|+++.|++
T Consensus 132 ~~-----d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~~~~~~pl-~~gaDivv~S~t 205 (405)
T PRK08776 132 LT-----DPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPALQKPL-EFGADLVLHSTT 205 (405)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcccccCCcc-cccCCEEEecCc
Confidence 64 889999999889999999999999999999999999999999999999999876542222 357899999999
Q ss_pred CcCCCCc---ceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|+++++| .|+++++ +++.+++..... ....+.+......+...++ + ++..
T Consensus 206 K~l~g~~~~~~G~vv~~~~~l~~~l~~~~~---------------------~~g~~~s~~~a~l~~~gl~---t--l~~r 259 (405)
T PRK08776 206 KYINGHSDVVGGAVVARDAELHQQLVWWAN---------------------ALGLTGSPFDAFLTLRGLR---T--LDAR 259 (405)
T ss_pred eeecCCCCceEEEEEeCCHHHHHHHHHHHH---------------------hcCCCCCHHHHHHHHhhhC---c--HHHH
Confidence 9887554 6777775 445444432111 0011233333333322332 2 4555
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+.+..+.++|++.+.+
T Consensus 260 ~~~~~~na~~la~~L~~~p~v 280 (405)
T PRK08776 260 LRVHQENADAIAALLDGHAAV 280 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 677888888888888877653
No 163
>PRK06855 aminotransferase; Validated
Probab=99.91 E-value=1.7e-22 Score=194.49 Aligned_cols=262 Identities=13% Similarity=0.087 Sum_probs=174.9
Q ss_pred CCeEEeccCCC---C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeC
Q 017640 66 KKLVYLDNAAT---S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~---~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~ 136 (368)
..++++..+.+ . ++|+.+.+++.+.+..... .++.......++|+++++++ |.+ .+++|++|+
T Consensus 32 ~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~--------~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~ 103 (433)
T PRK06855 32 VKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKS--------YGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFN 103 (433)
T ss_pred ccccccccCCCcccCCCCCHHHHHHHHHHhhcCCC--------CCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcC
Confidence 45677776665 3 6788888888876643100 01111223346777777776 432 235999999
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcc--cCceEE
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLS--RKTKLV 212 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~--~~~~~v 212 (368)
|+++++..++. + +++||.|++.+|.|+... .. .....|++++.+++++ ++.+|+++|++++. ++++++
T Consensus 104 G~~~al~~~~~-l----~~~Gd~Vlv~~P~Y~~~~-~~--~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i 175 (433)
T PRK06855 104 GLGDAIAKIYG-L----LRREARVIGPSPAYSTHS-SA--EAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGI 175 (433)
T ss_pred cHHHHHHHHHH-h----cCCCCeEEEeCCCCchHH-HH--HHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEE
Confidence 99999999985 6 789999999999998732 11 1223488889998874 36789999999986 357899
Q ss_pred EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 213 VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 213 ~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++|+||||.+++ +++|+++|++||++||+|++|..-. .++ .+...+..++++|+||.|+.+| +||+
T Consensus 176 ~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~i 255 (433)
T PRK06855 176 LLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWI 255 (433)
T ss_pred EEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEE
Confidence 99999999999999 6788889999999999999987221 111 1211124589999999999888 9999
Q ss_pred EEcc--------cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHH
Q 017640 281 FGKS--------DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL--STIGMQKIHAYEV 350 (368)
Q Consensus 281 ~~~~--------~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~--~~~g~~~i~~~~~ 350 (368)
++++ ++++.+.... .. ..+++...+.++..+++.- ++ -++.++++.+
T Consensus 256 i~p~~~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~Q~a~~~~l~~~~~~~-~~~~~~~~~~ 312 (433)
T PRK06855 256 EVYNADKDEVFKKYINSILNAK---------------------MI-EVCSTTLPQMAIPRIMSHPEYKN-YLKERNKRYE 312 (433)
T ss_pred EEeCCchhhHHHHHHHHHHHhh---------------------cc-ccCCChHHHHHHHHhhcCCcHHH-HHHHHHHHHH
Confidence 9742 1122221110 00 1133445555555555321 11 2456667777
Q ss_pred HHHHHHHHHHHhhcCC
Q 017640 351 KWIICSIIVIQERHNT 366 (368)
Q Consensus 351 ~l~~~l~~~l~~~~g~ 366 (368)
+..+.+.+.|.+++|+
T Consensus 313 ~r~~~~~~~L~~~~~~ 328 (433)
T PRK06855 313 KRSNIAYEKLKDVPGL 328 (433)
T ss_pred HHHHHHHHHHhcCCCe
Confidence 7778888888765553
No 164
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=9.3e-23 Score=191.75 Aligned_cols=169 Identities=12% Similarity=0.171 Sum_probs=142.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+....+++.++++.|.+ ++++++|+++|+..++.++ +++||+|+++++.|++....+....+..|+++..++
T Consensus 49 nPt~~~lE~~lA~l~g~~---~~~~~~sG~~Ai~~al~al----l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d 121 (377)
T TIGR01324 49 TLTHFALQDAMCELEGGA---GCYLYPSGLAAVTNSILAF----VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYD 121 (377)
T ss_pred CccHHHHHHHHHHHhCCC---cEEEECcHHHHHHHHHHHh----cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEEC
Confidence 345568999999999975 7789999999999999988 899999999999998766544455567799988876
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. +.+.+++++++++++|++++++||+|.+.|+++|+++|+++|+++++|++|+.|.. .....++.|+++.|++
T Consensus 122 ~~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~g~~-~~pl~~gaDivv~S~t 195 (377)
T TIGR01324 122 PL-----IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAAGLL-FKPLEHGVDISIQAGT 195 (377)
T ss_pred CC-----CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccc-cCccccCceEEEecCc
Confidence 43 33789999999999999999999999999999999999999999999999998876 2333568999999999
Q ss_pred CcCCCCc---ceEEEEcccccccCC
Q 017640 270 KMCGPTG---IGFLFGKSDLLSAMP 291 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~~l~ 291 (368)
|++|+++ +|+++.+++.++.++
T Consensus 196 K~l~G~~d~~gG~v~~~~~~~~~l~ 220 (377)
T TIGR01324 196 KYLVGHSDIMIGTVVANARTWDQLR 220 (377)
T ss_pred eeccCCCCceEEEEEeCHHHHHHHH
Confidence 9876553 688888887766554
No 165
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.91 E-value=1.5e-22 Score=193.70 Aligned_cols=264 Identities=14% Similarity=0.139 Sum_probs=172.1
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~t~g~ 138 (368)
++++.|+.+... ++++.+.+++.+.+......... .++.......++|+++++++ ++++ ++|++|+|+
T Consensus 34 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-~~I~it~Ga 108 (409)
T PRK07590 34 AKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETF----RGYGPEQGYDFLREKIAENDYQARGCDISA-DEIFISDGA 108 (409)
T ss_pred CceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCc----cCCCCCCCCHHHHHHHHHHHHHhcCCcCCh-hhEEECCCH
Confidence 568899998877 56788888888887653111000 01111223346888888775 4445 499999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE-----------EEEEeCCCC--CCCCHHHHHHhc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN-----------LKFLNLNDD--ESPDLDKLKEML 205 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~-----------v~~v~~~~~--~~~d~~~l~~~l 205 (368)
++++.++. .+ +.+||+|++.+|+|+.. ...++..|.+ ++.++++++ +.+|++
T Consensus 109 ~~al~~l~-~~----~~~gd~V~v~~P~Y~~~----~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~------ 173 (409)
T PRK07590 109 KCDTGNIL-DI----FGPDNTIAVTDPVYPVY----VDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP------ 173 (409)
T ss_pred HHHHHHHH-Hh----cCCCCEEEEeCCCCcch----HHHHHHcCCcccccccccccceeEeecccccCCcccCc------
Confidence 99999864 44 67999999999988874 4445556876 888988643 333322
Q ss_pred ccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCC----ccc--c-cCCCC-CccEEEecCcCcCCC
Q 017640 206 SRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP----HMV--V-DVQGL-DADFLVASSHKMCGP 274 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~----~~~--~-~~~~~-~~d~~~~s~~K~~g~ 274 (368)
.+++++|++++|+||||.+++ +++|+++|++||++||+|++|..- ..+ + .++.. +..++++|+||.+|.
T Consensus 174 ~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 174 EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 257899999999999999999 668888899999999999998721 111 1 12211 346888999999998
Q ss_pred Cc--ceEEEEcccccccCCCcc-----cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 017640 275 TG--IGFLFGKSDLLSAMPPFL-----GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (368)
Q Consensus 275 ~G--~G~l~~~~~li~~l~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~ 347 (368)
+| +||+++++++++.+.... .-+.. .......+.+...+.++..+++.....-++++++
T Consensus 254 pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~--------------~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~ 319 (409)
T PRK07590 254 TGTRCAYTVVPKELKGKTSDGEGVSLNSLWNR--------------RQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELID 319 (409)
T ss_pred cCceeEEEEcCHHHhhhccccchhhhHHHHHH--------------HHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 88 999999998876331000 00000 0000011344455555555443111112455666
Q ss_pred HHHHHHHHHHHHHHhh
Q 017640 348 YEVKWIICSIIVIQER 363 (368)
Q Consensus 348 ~~~~l~~~l~~~l~~~ 363 (368)
+.++..+++.+.|.+.
T Consensus 320 ~~~~~r~~l~~~L~~~ 335 (409)
T PRK07590 320 YYMENAKIIREGLESA 335 (409)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6777777787877764
No 166
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.91 E-value=5.1e-22 Score=189.77 Aligned_cols=261 Identities=17% Similarity=0.203 Sum_probs=184.3
Q ss_pred CeEEeccCC-CC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 67 KLVYLDNAA-TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 67 ~~i~l~~~~-~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.++.|..+. .+ ..+|.+++++.++++.+..++.. ...-.+..+...++++.+++++|.+ ..++++++++|+..
T Consensus 46 ~~~~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~g~~~~~~~Le~~la~~~g~~---~~l~~~sG~~an~~ 120 (402)
T TIGR01821 46 DVTVWCSNDYLGMGQHPEVLQAMHETLDKYGAGAGG--TRNISGTNIPHVELEAELADLHGKE---SALVFTSGYVANDA 120 (402)
T ss_pred eEEEeEccCcCCCCCCHHHHHHHHHHHHHcCCCCcc--hhhhhCCcHHHHHHHHHHHHHhCCC---eEEEECchHHHHHH
Confidence 345555444 44 56888999999999886433221 1111223455678999999999964 44556666889999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----cCceEEEEcccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISNM 220 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~ 220 (368)
++..+.. ..+++.|+.....|.+....+ +..|+++..++.. |++++++.++ +++++|++++++|+
T Consensus 121 ai~~l~~--~~~~~~v~~~~~~h~s~~~~~----~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~e~~~~~ 189 (402)
T TIGR01821 121 TLATLAK--IIPGCVIFSDELNHASMIEGI----RHSGAEKFIFRHN-----DVAHLEKLLQSVDPNRPKIIAFESVYSM 189 (402)
T ss_pred HHHHhhC--CCCCCEEEEcchHhHHHHHHH----HHcCCeEEEECCC-----CHHHHHHHHHhccCCCCeEEEEcCCCCC
Confidence 9887621 236777777766776654443 4457777666543 6777777775 25789999999999
Q ss_pred cccccCHHHHHHHHHhcCCEEEEecCCcCCcc-c-----ccCCC--CCccEEEecCcCcCCCCcceEEEEcccccccCCC
Q 017640 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHM-V-----VDVQG--LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~-----~~~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~ 292 (368)
+|.+.|+++|.++|++||+++++|++|+.|.. + ..... ..+|+++++++|.+|..| ||+++++++++.++.
T Consensus 190 ~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~i~~~~~~~~~l~~ 268 (402)
T TIGR01821 190 DGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG-GYIAASRKLIDAIRS 268 (402)
T ss_pred CCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC-ceeecCHHHHHHHHH
Confidence 99999999999999999999999999996543 1 11111 246899999999999887 899889888776653
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
...+ ..| .++.+....+++.++++.+.+. +.++++..++.+++.+.|++. |+
T Consensus 269 ~~~~------------------~~~-t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~ 320 (402)
T TIGR01821 269 YAPG------------------FIF-TTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GI 320 (402)
T ss_pred hCcC------------------cee-cCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CC
Confidence 2211 011 2356666777788889988764 666777788999999998775 44
No 167
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.90 E-value=1.1e-22 Score=189.05 Aligned_cols=241 Identities=17% Similarity=0.185 Sum_probs=172.4
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
++.++|..+.++..++ ..+... ..+..+|+ .. ..++|+.+++++|.+++ +|++|+|+++++..+
T Consensus 17 ~~~~~~~~~~~~~~~~-~~~~~~---~~~~~y~~----------~~-~~~lr~~la~~~~~~~~-~i~~t~G~~~~i~~~ 80 (330)
T TIGR01140 17 EDWLDFSTGINPLGPP-VPPIPA---SAWARYPD----------PE-YDELRAAAAAYYGLPAA-SVLPVNGAQEAIYLL 80 (330)
T ss_pred hheeEccccCCCCCCC-hhhcch---HHHhhCCC----------cc-HHHHHHHHHHHhCCChh-hEEECCCHHHHHHHH
Confidence 5678899887664433 222211 12212221 11 24899999999998754 999999999999997
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
..++ .+| .|++.+|+|.. +...++..|.+++.++ |++.+++.+ ++++++++++|+||||.++
T Consensus 81 ~~~l-----~~g-~vl~~~p~y~~----~~~~~~~~g~~~~~~~-------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~ 142 (330)
T TIGR01140 81 PRLL-----APG-RVLVLAPTYSE----YARAWRAAGHEVVELP-------DLDRLPAAL-EELDVLVLCNPNNPTGRLI 142 (330)
T ss_pred HHHh-----CCC-eEEEeCCCcHH----HHHHHHHcCCEEEEeC-------CHHHHHhhc-ccCCEEEEeCCCCCCCCCC
Confidence 6654 567 69999997776 4455567799999887 789999988 4678999999999999999
Q ss_pred C---HHHHHHHHHhcCCEEEEecCCcCCcccccC----CCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccC
Q 017640 226 P---IEEIVHWSHDVGAKVLVDACQSVPHMVVDV----QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 226 ~---l~~i~~l~~~~g~~li~D~a~~~~~~~~~~----~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g 296 (368)
+ +++|+++|++||+++|+|++|.......++ +..+.+++++|+||.+|++| +||+++++++++.+.+....
T Consensus 143 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~ 222 (330)
T TIGR01140 143 PPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP 222 (330)
T ss_pred CHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC
Confidence 9 667888889999999999998632221111 12356799999999999888 79999999988777654321
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+.+..+..++...+ ++.+ .+.++++.+++.+++.+.|+++...
T Consensus 223 -----------------------~~~s~~~q~~~~~~l---~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 267 (330)
T TIGR01140 223 -----------------------WTVNGPARAAGRAAL---ADTAWQAATRARLAAERARLAALLARLGGL 267 (330)
T ss_pred -----------------------CCchHHHHHHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 133444444444444 3322 3567788888889999988876433
No 168
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.90 E-value=3.8e-22 Score=191.07 Aligned_cols=261 Identities=20% Similarity=0.229 Sum_probs=180.7
Q ss_pred eEEeccC-CCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 68 LVYLDNA-ATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 68 ~i~l~~~-~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.+.+..+ ..+ ..++.+++++.+.+..+..+... . ..-++..+...++++.+++++|.+ +.+++++| ++++..+
T Consensus 48 ~~~~~sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~-s-~~~~~~~~~~~~Le~~la~~~g~~--~~i~~~sG-~~a~~~~ 122 (410)
T PRK13392 48 VTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGG-T-RNISGTSHPHVLLERELADLHGKE--SALLFTSG-YVSNDAA 122 (410)
T ss_pred EEEEECCCccCCCCCHHHHHHHHHHHHHcCCCCch-h-hhcccChHHHHHHHHHHHHHhCCC--CEEEECcH-HHHHHHH
Confidence 3444444 444 46889999999988876433221 1 111122334668999999999964 35666665 6788888
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----cCceEEEEccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISNML 221 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~t 221 (368)
+..+. ...+|+.|++....|.+.+. .++..|++++.++.+ |.+.+++.+. +++++|++++++|||
T Consensus 123 i~~l~--~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~t~~v~i~~~~n~t 191 (410)
T PRK13392 123 LSTLG--KLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHN-----DLADLEEQLASVDPDRPKLIAFESVYSMD 191 (410)
T ss_pred HHHHh--cCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCC-----CHHHHHHHHHhccCCCCEEEEEeCCCCCC
Confidence 87662 13578988888777877543 345568888777643 4555555543 478999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcccc------cCC--CCCccEEEecCcCcCCCCcceEEEEcccccccCCCc
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV------DVQ--GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~------~~~--~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~ 293 (368)
|.+.|+++|.++|++||+++++|++|+.|.... ... ..++|++++|++|.||..| ||+++++++++.++..
T Consensus 192 G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G-G~~~~~~~~~~~l~~~ 270 (410)
T PRK13392 192 GDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG-GYIAASADLIDFVRSF 270 (410)
T ss_pred cccccHHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc-chhhcCHHHHHHHHHh
Confidence 999999999999999999999999999654311 001 1146899999999999887 8998888888765533
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..++ .+ ..+.+....+++.++++.+... ...+++..+..+++.+.|.+. |++
T Consensus 271 ~~~~------------------~~-s~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~ 322 (410)
T PRK13392 271 APGF------------------IF-TTALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNAN-GIP 322 (410)
T ss_pred Ccch------------------hc-cCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 2211 11 1234556677788888877653 345577788888888888875 443
No 169
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=6.1e-22 Score=186.54 Aligned_cols=221 Identities=17% Similarity=0.113 Sum_probs=159.3
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC
Q 017640 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 192 (368)
.++|+++++++|++++ +|++|+|+++++.+++.++ +.+| +.|++++|.|. .+...++..|++++.++++.
T Consensus 62 ~~lr~~ia~~~~~~~~-~I~~t~G~~~~l~~~~~~~----~~~g~~~vlv~~p~y~----~~~~~~~~~g~~~~~v~~~~ 132 (364)
T PRK04781 62 PGLRSALAALYGCAPE-QLLIGRGSDEAIDLLVRAL----CVPGRDAVLVTPPVFG----MYAVCARLQNAPLVEVPLVD 132 (364)
T ss_pred HHHHHHHHHHhCcChH-HEEEeCCHHHHHHHHHHHh----cCCCCCeEEEcCCChH----HHHHHHHHcCCEEEEEecCC
Confidence 4899999999999764 9999999999999999988 7788 79999999654 35556677799999999842
Q ss_pred ---CCCCCHHHHHHhc-ccCceEEEEcccccccccccCHHHHHHHHHh--cCCEEEEecCCcCCcc---ccc-CCCCCcc
Q 017640 193 ---DESPDLDKLKEML-SRKTKLVVIHHISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHM---VVD-VQGLDAD 262 (368)
Q Consensus 193 ---~~~~d~~~l~~~l-~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~---~~~-~~~~~~d 262 (368)
++.+|++++++.+ .+++++|++++++||||.++|.+++.++++. +++++|+|++|..-.. ... ....+..
T Consensus 133 ~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~v 212 (364)
T PRK04781 133 GADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNL 212 (364)
T ss_pred CccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCE
Confidence 2467888876544 6788999999999999999998888777764 4789999999872211 111 1223467
Q ss_pred EEEecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 263 FLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 263 ~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
+++.|+||.||.+| +||+++++++++.+......+ ..+.....++..+++.-...
T Consensus 213 i~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~-----------------------~~~~~~~~~a~~~l~~~~~~ 269 (364)
T PRK04781 213 AVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY-----------------------PVPTPCAALAEQALSAPALA 269 (364)
T ss_pred EEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-----------------------CCCHHHHHHHHHHHhcccHH
Confidence 88999999999888 999999999988776443211 22333333333333321000
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 341 GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
-.....++.++.++.+.+.|++.+|+
T Consensus 270 ~~~~~~~~~~~~r~~l~~~L~~~~~~ 295 (364)
T PRK04781 270 VTARRVAEVRAERERLHAALAQLPGV 295 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 12233344566777888888776553
No 170
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.90 E-value=6.1e-23 Score=194.38 Aligned_cols=218 Identities=17% Similarity=0.188 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+..+++++.+++++|.+ ..++++|++.|+..++.++ +++||+|+++.+.|.+.+..+...++..|+++..++.
T Consensus 61 pt~~~Le~~lA~l~G~~---~al~~~sG~~Ai~~~l~al----~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~ 133 (386)
T PRK06767 61 PTVKLFEERMAVLEGGE---EALAFGSGMAAISATLIGF----LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDM 133 (386)
T ss_pred cchHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCC
Confidence 44568999999999975 3455566678999999888 8999999999999998887777777777888777765
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 270 (368)
. |++++++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+....++ ..+.|+++.|++|
T Consensus 134 ~-----d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl-~~g~Div~~S~sK 207 (386)
T PRK06767 134 E-----TEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPL-ELGCDAVVHSATK 207 (386)
T ss_pred C-----CHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCcEEEecCcc
Confidence 4 889999999999999999999999999999999999999999999999999866543333 3578999999999
Q ss_pred cCCCCc---ceEEEEcccccccCC-CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 271 MCGPTG---IGFLFGKSDLLSAMP-PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 271 ~~g~~G---~G~l~~~~~li~~l~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+++++| +|+++++++.++.+. ......+ +..+....+ .++.-++. +....
T Consensus 208 ~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g---------------------~~~~~~~a~---l~~~~L~t--l~~r~ 261 (386)
T PRK06767 208 YIGGHGDVVAGVTICKTRALAEKIRPMRKDIG---------------------GIMAPFDAW---LLLRGLKT--LAVRM 261 (386)
T ss_pred eecCCCCceeEEEEeChHHHHHHHHHHHHHhC---------------------CCCCHHHHH---HHHcCCCc--HHHHH
Confidence 888776 599999988776543 2211110 111211111 12222222 34445
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 017640 347 AYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~t 367 (368)
++.++++.++.++|.++++++
T Consensus 262 ~~~~~~a~~la~~L~~~p~v~ 282 (386)
T PRK06767 262 DRHCDNAEKIVSFLKNHDAVE 282 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCcc
Confidence 677888999999999988764
No 171
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.90 E-value=3.7e-22 Score=188.29 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=166.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~g~ 138 (368)
++++.|+.+.+. +.++.+.+++.+.... ..++. .....++|+++++++ |.+ ++++|++|+|+
T Consensus 27 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~Y~~----------~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~ 95 (364)
T PRK07865 27 DGIVDLSVGTPVDPVPPVIQEALAAAADA-PGYPT----------TAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGS 95 (364)
T ss_pred CCEEEcCCCCCCCCCCHHHHHHHHHHHhh-CCCCC----------ccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccCh
Confidence 457888887654 4567788887665432 11111 111225666666665 532 22499999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
++++..++..+ .+++||.|++++|.|+.. ...++..|++++.++ ++++++ ..++++|++++++
T Consensus 96 ~~~i~~~~~~l---~~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~-------~~~~l~---~~~~~~v~~~~p~ 158 (364)
T PRK07865 96 KELVAWLPTLL---GLGPGDVVVIPELAYPTY----EVGARLAGATVVRAD-------SLTELG---PQRPALIWLNSPS 158 (364)
T ss_pred HHHHHHHHHHH---cCCCCCEEEECCCCcccH----HHHHHhcCCEEEecC-------ChhhCC---cccceEEEEcCCC
Confidence 99999987766 368999999999988874 444556799988875 233332 2578999999999
Q ss_pred cccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---ccc-CC------CCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVD-VQ------GLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~-~~------~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
||||.+++ +++|.++|++||+++|+|++|..-.. ++. +. ..+..++++|+||.||.+| +||++.+
T Consensus 159 NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~ 238 (364)
T PRK07865 159 NPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGD 238 (364)
T ss_pred CCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecC
Confidence 99999999 57888899999999999999883211 111 10 1235699999999998888 9999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.++..... ...+.+.....++..+++.. .-.+..+++..+..+.+.+.|++.
T Consensus 239 ~~~~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~ 295 (364)
T PRK07865 239 PALVAELLEVRKH---------------------AGMMVPAPVQAAMVAALGDD--AHVREQRERYARRRAVLRPALEAA 295 (364)
T ss_pred HHHHHHHHHHHHh---------------------cCCCcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9988776533210 00123444444444444421 124566667777778888888763
No 172
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.90 E-value=1.4e-22 Score=193.61 Aligned_cols=203 Identities=20% Similarity=0.289 Sum_probs=149.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEeCCHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI---NASDSGEIVFTKNATEA 141 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~---~~~~~~~v~~t~g~t~a 141 (368)
++++.|+.+... ++++.+.+++.+.+.+...... ..++.......++|+++++++ +.++ ++|++|+|++++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~Y~p~~g~~~lr~aia~~~~~~~~~~-d~I~it~Ga~~a 107 (402)
T TIGR03542 33 ADIIRLGIGDTTQPLPASVIEAFHNAVDELASEET----FRGYGPEQGYPFLREAIAENDYRGRIDP-EEIFISDGAKCD 107 (402)
T ss_pred CCeEEcCCCCCCCCCCHHHHHHHHHHHhccccccc----ccCCCCCCCCHHHHHHHHHHHHhcCCCH-HHEEECCCcHHH
Confidence 578999998877 5788889999888765311100 001111233447889999876 5555 499999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC-----------EEEEEeCCCC--CCCCHHHHHHhcccC
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-----------NLKFLNLNDD--ESPDLDKLKEMLSRK 208 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-----------~v~~v~~~~~--~~~d~~~l~~~l~~~ 208 (368)
+..+. .+ +.+||.|++.+|+|+. +...++..|+ +++.++.+++ +.+|+. + .++
T Consensus 108 l~~l~-~l----~~~gd~Vlv~~P~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~---~--~~~ 173 (402)
T TIGR03542 108 VFRLQ-SL----FGSDNTVAVQDPVYPA----YVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLP---E--EPK 173 (402)
T ss_pred HHHHH-Hh----cCCCCEEEEeCCCCcc----hHHHHHHcCCccccccccccceEEEeecchhhCCCCCcc---c--cCC
Confidence 99864 45 5789999999998887 4455566788 9999998643 333332 1 146
Q ss_pred ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----cccc---CCC-CCccEEEecCcCcCCCCc-
Q 017640 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVD---VQG-LDADFLVASSHKMCGPTG- 276 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~~---~~~-~~~d~~~~s~~K~~g~~G- 276 (368)
+++|++++++||||.+++ +++|+++|++||++||+|++|..-. .+.. ++. .+..++++|+||.||.+|
T Consensus 174 ~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl 253 (402)
T TIGR03542 174 IDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV 253 (402)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence 899999999999999999 7889999999999999999987311 1111 121 134678899999999888
Q ss_pred -ceEEEEccccc
Q 017640 277 -IGFLFGKSDLL 287 (368)
Q Consensus 277 -~G~l~~~~~li 287 (368)
+||++++++++
T Consensus 254 RiG~~i~~~~l~ 265 (402)
T TIGR03542 254 RLGWTVVPKELT 265 (402)
T ss_pred ceEEEEecHHHh
Confidence 99999998876
No 173
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.90 E-value=5.9e-22 Score=188.98 Aligned_cols=277 Identities=19% Similarity=0.153 Sum_probs=210.8
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
..+.-......+++...+.+..++.....++ ...+...+..+++-..++++++.+......||+|+|+++.+++.
T Consensus 63 ~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~-----~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~ 137 (460)
T COG0076 63 RANLAGFCPTRVPPVAAELLVSALNKNLGDP-----DESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALL 137 (460)
T ss_pred ceEEEccCCCCCHHHHHHHHHHHHhhcCCCc-----ccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHH
Confidence 3444444555677777777777766533322 23345678888899999999999755477999999999999888
Q ss_pred HccCCCC----CCC------CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceE--EEE
Q 017640 148 SWGLSNL----KSG------DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKL--VVI 214 (368)
Q Consensus 148 ~~~~~~~----~~g------d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~--v~~ 214 (368)
+.+.... ..+ -+|+++...|+| +.+.+...|.+++.++.++ +..+|++++++++++++.. |+.
T Consensus 138 aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s----~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~ 213 (460)
T COG0076 138 AARERWRKRALAESGKPGGKPNIVCSETAHFS----FEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVG 213 (460)
T ss_pred HHHHHHHHHhhhcccccCCCCeEEecCcchhH----HHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCceEEE
Confidence 7532211 101 169999998888 6777788899999999988 7999999999999998766 999
Q ss_pred cccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-------cCCCCCccEEEecCcC-cCCCCcceEEEEccc-
Q 017640 215 HHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-------DVQGLDADFLVASSHK-MCGPTGIGFLFGKSD- 285 (368)
Q Consensus 215 ~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-------~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~- 285 (368)
+..+++||.+.|+++|+++|+++++++++|+|++....++ ++...++|.++.|+|| .+.|.|+|+++++++
T Consensus 214 ~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e 293 (460)
T COG0076 214 TAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEE 293 (460)
T ss_pred EecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHH
Confidence 9999999999999999999999999999999999655533 2222368999999999 567999999999987
Q ss_pred -ccccCC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 017640 286 -LLSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 286 -li~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+.+.+. ++..|+ ... .--..++.+....+++...+..+...|..++.+++.++++++.+.|.
T Consensus 294 ~l~~~~~~~~~yl~~~-~~~-------------~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~ 359 (460)
T COG0076 294 ALRRILIFADYYLPGG-GIP-------------NFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELE 359 (460)
T ss_pred HhhhhhhcccccCCCC-CcC-------------ceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 332222 222221 110 11124466666788888888988777999999999999999999999
Q ss_pred hhcCCC
Q 017640 362 ERHNTT 367 (368)
Q Consensus 362 ~~~g~t 367 (368)
+...+.
T Consensus 360 ~~~~~e 365 (460)
T COG0076 360 KLGDFE 365 (460)
T ss_pred hCCCcE
Confidence 885443
No 174
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=1.3e-22 Score=191.61 Aligned_cols=218 Identities=20% Similarity=0.265 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.+++++|++.|.+ ++++++|+++++..++.++ +++||+|+++++.|++.+..+....+..+.++..++
T Consensus 51 ~pt~~~L~~~lA~l~g~~---~~i~~~sg~~Ai~~~l~~l----~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd 123 (386)
T PRK08045 51 NPTRDVVQRALAELEGGA---GAVLTNTGMSAIHLVTTVF----LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_pred CccHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHH----cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC
Confidence 344568999999999953 6899999999999999988 899999999999999887777777666666777765
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
. .|++++++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+.....+ ..+.|+++.|++
T Consensus 124 ~-----~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~pl-~~gaDivv~S~t 197 (386)
T PRK08045 124 Q-----GDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNPL-ALGADLVLHSCT 197 (386)
T ss_pred C-----CCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCCEEEeecc
Confidence 2 4899999999989999999999999999999999999999999999999999877543222 457899999999
Q ss_pred CcCC-CCc--ceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCG-PTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g-~~G--~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|+++ +.+ .|+++++ +++++.++.... .. ..+.+......+ +.-++. +...
T Consensus 198 K~l~G~~d~~~G~vi~~~~~~~~~l~~~~~--------------------~~-g~~~~p~~~~l~---~rgl~t--l~~R 251 (386)
T PRK08045 198 KYLNGHSDVVAGVVIAKDPDVVTELAWWAN--------------------NI-GVTGGAFDSYLL---LRGLRT--LVPR 251 (386)
T ss_pred eeccCCCCceeEEEEeCcHHHHHHHHHHHH--------------------hc-CCCCCHHHHHHH---Hhhhcc--HHHH
Confidence 9775 444 7877774 555554432211 01 112222222222 222232 4555
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+.+..+.++|++++.+
T Consensus 252 ~~~~~~na~~la~~L~~~p~v 272 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCE
Confidence 677778888888888877653
No 175
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.90 E-value=1.4e-22 Score=192.45 Aligned_cols=218 Identities=18% Similarity=0.199 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.++++.|.+ +.+++++++.|+..++.++ +++||+|+++...|.+.+..+...++..|+++++++
T Consensus 69 ~p~~~~le~~lA~l~g~~---~al~~~sG~~Ai~~~l~al----l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd 141 (403)
T PRK07810 69 NPTVSMFEERLRLIEGAE---ACFATASGMSAVFTALGAL----LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVD 141 (403)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEECChHHHHHHHHHHH----hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEEC
Confidence 344668999999999976 5678888889999999888 899999999998888888878888888899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++++|++|+.+.....+ ..+.|+++.|++
T Consensus 142 ~~-----d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~~~~~~~~-~~gaDivv~S~t 215 (403)
T PRK07810 142 GE-----DLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFATPLLQRGL-PLGADVVVYSGT 215 (403)
T ss_pred CC-----CHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hcCCcEEEccCC
Confidence 64 899999999999999999999999999999999999999999999999999977552222 457999999999
Q ss_pred CcCCCCc---ceEEEEcccccc-cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGKSDLLS-AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|++++.| .|+++.+++.+. .++...... ..+.+....+. ++.-++. +...
T Consensus 216 K~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~---------------------g~~~s~~~a~l---~l~~L~t--l~~R 269 (403)
T PRK07810 216 KHIDGQGRVLGGAILGDREYIDGPVQKLMRHT---------------------GPALSAFNAWV---LLKGLET--LALR 269 (403)
T ss_pred ceecCCcCceeEEEEeChHHHHHHHHHHHHHh---------------------CCCCCHHHHHH---HHhccCc--HHHH
Confidence 9988777 688888887654 233221100 11222222222 2333333 4455
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+.+..+.++|++++++
T Consensus 270 ~~~~~~~a~~~a~~L~~~p~v 290 (403)
T PRK07810 270 VRHSNASALRIAEFLEGHPAV 290 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCCc
Confidence 566777777778888877764
No 176
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.90 E-value=1.9e-22 Score=191.65 Aligned_cols=169 Identities=22% Similarity=0.318 Sum_probs=146.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.....+++++++++.|.+ ++++++|+++|+..++.++ +++||+|+++++.|.+.+..+...++..|+++++++
T Consensus 63 ~p~~~~Le~~iA~~~g~~---~~l~~~sG~~Ai~~al~~l----l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd 135 (400)
T PRK06234 63 NPTSTEVENKLALLEGGE---AAVVAASGMGAISSSLWSA----LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVD 135 (400)
T ss_pred CccHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEEC
Confidence 344568999999999974 5688888889999999887 899999999999999888777777788899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc--CCEEEEecCCcCCcccccCCCCCccEEEec
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--g~~li~D~a~~~~~~~~~~~~~~~d~~~~s 267 (368)
.. |++++++++++++++|++++++||||.+.|+++|.++|+++ |+++++|++|+.+.....+ ..+.|+++.|
T Consensus 136 ~~-----d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l-~~g~Divv~S 209 (400)
T PRK06234 136 TS-----NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPL-QLGADVVVHS 209 (400)
T ss_pred CC-----CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCch-hhCCcEEEee
Confidence 75 89999999999999999999999999999999999999997 9999999999876542222 3478999999
Q ss_pred CcCcCCCCc---ceEEEEcccccccCC
Q 017640 268 SHKMCGPTG---IGFLFGKSDLLSAMP 291 (368)
Q Consensus 268 ~~K~~g~~G---~G~l~~~~~li~~l~ 291 (368)
++|+++++| +|++++++++++.++
T Consensus 210 ~sK~l~g~g~~~gG~v~~~~~~~~~l~ 236 (400)
T PRK06234 210 ATKYLNGHGDVIAGFVVGKEEFINQVK 236 (400)
T ss_pred ccccccCCCCceeEEEEecHHHHHHHH
Confidence 999988776 599999988877654
No 177
>PLN02672 methionine S-methyltransferase
Probab=99.90 E-value=1.5e-21 Score=199.87 Aligned_cols=258 Identities=16% Similarity=0.137 Sum_probs=187.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC--CcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS--GEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--~~v~~t~g~t~a~ 142 (368)
++++.|+.+.+. ++|+.+++++.+.+..... . .+..+..+.+++++++.+|.+.+ ++|++++|+++++
T Consensus 697 ~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~--s-------~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 697 SSLIHMDVDESFLPVPSAVKASIFESFVRQNI--S-------ESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC--C-------CCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 678999999888 7889999999887754211 0 11134467899999999888743 4899999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhccc-CceEEEEcccc-
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR-KTKLVVIHHIS- 218 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~-~~~~v~~~~~~- 218 (368)
..++.++ +++||.|++.+|.|+. +...++..|++++.+++++ ++.+|++.|++++++ +.+.|++++|+
T Consensus 768 ~lll~aL----l~pGD~VLVp~PtY~~----Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnh 839 (1082)
T PLN02672 768 NKLVLCC----VQEGGTLCFPAGSNGT----YVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTI 839 (1082)
T ss_pred HHHHHHH----cCCCCEEEEeCCChHH----HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCC
Confidence 9999988 8999999999996666 5666777899999999973 478899999999976 34688889986
Q ss_pred cccccccC---HHHHHHHHHhcCCEEEEecCCcC----Ccc--cccC-------CC---CCccEEEecCcCcCCCCc--c
Q 017640 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PHM--VVDV-------QG---LDADFLVASSHKMCGPTG--I 277 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~~~--~~~~-------~~---~~~d~~~~s~~K~~g~~G--~ 277 (368)
||||.+++ +++|+++|++||++||+|++|+. +.. ..++ .. ....++++|+||.|+.+| +
T Consensus 840 NPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI 919 (1082)
T PLN02672 840 NPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF 919 (1082)
T ss_pred CCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence 99999999 77888899999999999999971 110 0111 11 114578889999999999 9
Q ss_pred eEEEEccc-ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH------hCHHHHHHHHH
Q 017640 278 GFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST------IGMQKIHAYEV 350 (368)
Q Consensus 278 G~l~~~~~-li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~------~g~~~i~~~~~ 350 (368)
||++++++ +++.+..... . ..+......++..++..+.. ..+...++..+
T Consensus 920 GylIap~~eLi~~l~~~~~---------------------~--s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk 976 (1082)
T PLN02672 920 GFLALNDSVLIDAFHSAPG---------------------L--SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILK 976 (1082)
T ss_pred eeEEeCCHHHHHHHHHhhh---------------------h--cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 99999765 7776653210 0 01222233444444433321 12445566677
Q ss_pred HHHHHHHHHHHhh
Q 017640 351 KWIICSIIVIQER 363 (368)
Q Consensus 351 ~l~~~l~~~l~~~ 363 (368)
+..+++.+.|.+.
T Consensus 977 ~rRd~L~e~L~~~ 989 (1082)
T PLN02672 977 SRAERLKETLEAC 989 (1082)
T ss_pred HHHHHHHHHHHHC
Confidence 7788888888764
No 178
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=1.4e-22 Score=190.68 Aligned_cols=169 Identities=23% Similarity=0.296 Sum_probs=141.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
....+.+++++|++.|.+ ++++++|+++|+..++.++ +++||+|+++.+.|.+.+..+....+..|.++++++
T Consensus 52 npt~~~Le~~lA~leg~e---~ivvt~gg~~Ai~~~l~al----l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd 124 (388)
T PRK08861 52 NPNRGLLEQTLSELESGK---GAVVTNCGTSALNLWVSAL----LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVD 124 (388)
T ss_pred CchHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHH----cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEEC
Confidence 445668999999999963 8999999999999999998 899999999999998877666666666688888886
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
. .|++++++++++++++|++++|+||||.++|+++|.++|+++|+++++|++|+.+.....+ +.++|+++.|++
T Consensus 125 ~-----~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~~~~~~pl-~~GaDivv~S~t 198 (388)
T PRK08861 125 Q-----SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLTPVLQKPL-ELGADFVIHSTT 198 (388)
T ss_pred C-----CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccCCCc-ccCCCEEEeecc
Confidence 4 3899999999999999999999999999999999999999999999999999977543222 458999999999
Q ss_pred CcCCCC-c--ceEEEEcc-cccccCC
Q 017640 270 KMCGPT-G--IGFLFGKS-DLLSAMP 291 (368)
Q Consensus 270 K~~g~~-G--~G~l~~~~-~li~~l~ 291 (368)
|+++++ + .|++++++ ++.+.++
T Consensus 199 K~l~G~~d~~gG~i~~~~~~~~~~~~ 224 (388)
T PRK08861 199 KYINGHSDVIGGVLITKTKEHAEELA 224 (388)
T ss_pred eeccCCCcceeEEEEecHHHHHHHHH
Confidence 977654 3 68777754 4444443
No 179
>PRK08354 putative aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=180.64 Aligned_cols=184 Identities=17% Similarity=0.179 Sum_probs=143.2
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.+++.|+.+.+..+|+.+.+++.+.+.....+|. ...+|+++++++|. +|++|+|+++++..+
T Consensus 8 ~~~i~l~~~~np~~p~~~~~a~~~~~~~~~~yp~-------------~~~l~~~ia~~~~~----~I~vt~G~~~al~~~ 70 (311)
T PRK08354 8 EGLIDFSASVNPYPPEWLDEMFERAKEISGRYTY-------------YEWLEEEFSKLFGE----PIVITAGITEALYLI 70 (311)
T ss_pred cceeEecCCCCCCCCHHHHHHHHHHHHHhhcCCC-------------hHHHHHHHHHHHCC----CEEECCCHHHHHHHH
Confidence 5678999887776678889998877654332221 13689999999982 799999999999988
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
+..+ .+||+|++.+|+|+. +...++..|++++.++ +|++.+++.++ +++++++++|+||||.++
T Consensus 71 ~~~~-----~~gd~vlv~~P~y~~----~~~~~~~~g~~~~~~~------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~ 134 (311)
T PRK08354 71 GILA-----LRDRKVIIPRHTYGE----YERVARFFAARIIKGP------NDPEKLEELVE-RNSVVFFCNPNNPDGKFY 134 (311)
T ss_pred HHhh-----CCCCeEEEeCCCcHH----HHHHHHHcCCEEeecC------CCHHHHHHhhc-CCCEEEEecCCCCCCCcc
Confidence 7543 489999999997777 5556677799997765 37889988876 568899999999999999
Q ss_pred C---HHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 226 P---IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 226 ~---l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+ +++|.++|++||+++|+|++|.--...-........+++.|+||.||.+| +||+++
T Consensus 135 ~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 135 NFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhcCCccceeeeeee
Confidence 9 56777888999999999999963221101111346789999999999888 899988
No 180
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.90 E-value=1.8e-21 Score=185.72 Aligned_cols=222 Identities=21% Similarity=0.305 Sum_probs=165.3
Q ss_pred CCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEE
Q 017640 55 FPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVF 134 (368)
Q Consensus 55 f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~ 134 (368)
.+.+....+ ..+.+|+++.+.++.++.+.+++.+++..+. +.... ...+ ......+.+++.+++++|++. .++
T Consensus 70 ~~~lr~vin-atg~v~~tNlg~s~l~~~vieAv~~~~~~y~-~l~~~-l~~g-~~g~r~~~le~~lA~l~gae~---alv 142 (454)
T TIGR00474 70 RPSLRRVIN-ATGVVLHTNLGRAPLAEEAIEAVTDAARGYS-NLEYD-LETG-KRGSRYSHVEGLLCELTGAED---ALV 142 (454)
T ss_pred cccccceeC-CCCcEEeccCCCCCCCHHHHHHHHHHHhccc-chhcc-cccc-ccchHHHHHHHHHHHHhCCCc---EEE
Confidence 334443333 4667888888888999999999999988653 22111 1111 123446789999999999973 355
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCc---ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceE
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHH---SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKL 211 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~---s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~ 211 (368)
++|++.|+.+++.+ +.+||+|++++.+|. +.+ .+...++..|+++++++.+ ...|+++++++++++|++
T Consensus 143 v~sg~aAi~l~l~~-----l~~GdeVIvs~~e~v~~ggs~-~i~~~~~~~G~~~~~v~~~--~~~~l~dle~aI~~~T~l 214 (454)
T TIGR00474 143 VNNNAAAVLLALNT-----LAKGKEVIVSRGELVEIGGSF-RIPDVMEQSGAKLVEVGTT--NRTHLKDYEDAITENTAL 214 (454)
T ss_pred ECCHHHHHHHHHHH-----hCCcCEEEECCChhhhhcchh-hHHHHHHHcCCEEEEeCCC--CCCCHHHHHHhcCcCCEE
Confidence 67778899888854 578999999988753 222 2334567789999999764 234799999999999999
Q ss_pred EEEccccccc--c--cccCHHHHHHHHHhcCCEEEEecCCc---------CCcccc--cCCCCCccEEEecCcCcCCCCc
Q 017640 212 VVIHHISNML--A--SILPIEEIVHWSHDVGAKVLVDACQS---------VPHMVV--DVQGLDADFLVASSHKMCGPTG 276 (368)
Q Consensus 212 v~~~~~~n~t--G--~~~~l~~i~~l~~~~g~~li~D~a~~---------~~~~~~--~~~~~~~d~~~~s~~K~~g~~G 276 (368)
|++.+++|++ | .+.|+++|+++||+||+++++|.+.+ .+..|. +....++|++++|.+|++|++.
T Consensus 215 v~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~ 294 (454)
T TIGR00474 215 LLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ 294 (454)
T ss_pred EEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe
Confidence 9999999984 6 57899999999999999999998632 222222 3345689999999999887666
Q ss_pred ceEEEEcccccccCC
Q 017640 277 IGFLFGKSDLLSAMP 291 (368)
Q Consensus 277 ~G~l~~~~~li~~l~ 291 (368)
.|++++++++++.++
T Consensus 295 ~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 295 AGIIVGKKELIERLK 309 (454)
T ss_pred EEEEEECHHHHHhhh
Confidence 899999999887765
No 181
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=186.33 Aligned_cols=208 Identities=22% Similarity=0.267 Sum_probs=158.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCC----C-CCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA----S-DSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~----~-~~~~v~~t~g~t 139 (368)
+.++.|+.+... ++++.+.+++.+.+....... .. +.......++|+.++++++. . ++++|++|+|++
T Consensus 33 ~~~~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~--~~----y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~ 106 (394)
T PRK06836 33 DNVFDFSLGNPSVPPPAAVKEALRELAEEEDPGL--HG----YMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106 (394)
T ss_pred CCeEEecCcCCCCCCCHHHHHHHHHHHhcCCcCc--cc----CCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChH
Confidence 456788777655 567888888887765421111 11 11123344677777877752 1 235899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
+++..++.++ +++||.|++++|.|.. +...++..|++++.++.+++ +.+|++++++++++++++|++++++
T Consensus 107 ~al~~~~~~l----~~~gd~Vli~~p~~~~----~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~ 178 (394)
T PRK06836 107 GALNVALKAI----LNPGDEVIVFAPYFVE----YRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPN 178 (394)
T ss_pred HHHHHHHHHh----cCCCCEEEEcCCCCcc----HHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCC
Confidence 9999999988 8899999999998877 44456677999999999866 7889999999999899999999999
Q ss_pred cccccccC---HHHHHHHHHh------cCCEEEEecCCcCCcc---c-cc-CCCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 219 NMLASILP---IEEIVHWSHD------VGAKVLVDACQSVPHM---V-VD-VQGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~------~g~~li~D~a~~~~~~---~-~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
||||.++| +++|+++|++ ||+++|+|++|..-.. + .. ....+..++++|++|.+|.+| +||+++
T Consensus 179 NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~~ 258 (394)
T PRK06836 179 NPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIAV 258 (394)
T ss_pred CCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccCcEEEEecchhhccCcceeeEEEec
Confidence 99999999 6677888888 8999999999873211 1 11 122346799999999999777 999999
Q ss_pred ccccc
Q 017640 283 KSDLL 287 (368)
Q Consensus 283 ~~~li 287 (368)
++++.
T Consensus 259 ~~~~~ 263 (394)
T PRK06836 259 NPEME 263 (394)
T ss_pred CHHHh
Confidence 87763
No 182
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=6.9e-22 Score=185.88 Aligned_cols=246 Identities=17% Similarity=0.137 Sum_probs=167.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C---CCCCCcEEEeCC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N---ASDSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~---~~~~~~v~~t~g 137 (368)
+..+.|..+.+. ++++.+.+++++.... ..++. .....++|+++++++ | .++ ++|++|+|
T Consensus 21 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~-~~Y~~----------~~G~~~lr~~ia~~~~~~~~~~~~~~-~~I~it~G 88 (357)
T TIGR03539 21 DGIVDLSVGTPVDPVPPLIRAALAAAADA-PGYPQ----------TWGTPELREAIVDWLERRRGVPGLDP-TAVLPVIG 88 (357)
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhh-CCCCc----------ccCCHHHHHHHHHHHHHhcCCCCCCc-CeEEEccC
Confidence 566888887654 5577788887765432 11211 111224555555555 4 444 49999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++++..++..+ .+++||.|++.+|+|++.. ..++..|++++.++ |++.++ .+++++|+++++
T Consensus 89 ~~~~i~~~~~~l---~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~-------~~~~l~---~~~~~~v~~~~p 151 (357)
T TIGR03539 89 TKELVAWLPTLL---GLGPGDTVVIPELAYPTYE----VGALLAGATPVAAD-------DPTELD---PVGPDLIWLNSP 151 (357)
T ss_pred hHHHHHHHHHHH---cCCCCCEEEECCCCcHHHH----HHHHhcCCEEeccC-------ChhhcC---ccCccEEEEeCC
Confidence 999999988776 3689999999999887743 44456798887764 333332 257899999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcC-Cc--cc---ccCC----CCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSV-PH--MV---VDVQ----GLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~-~~--~~---~~~~----~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+||||.++| +++|.++|++||+++|+|++|.. .. .+ ++.. .....+++.|+||.||.+| +||+++
T Consensus 152 ~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~ 231 (357)
T TIGR03539 152 GNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG 231 (357)
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec
Confidence 999999998 66789999999999999999862 11 11 1110 1234688999999998888 899999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+...... ....++.....++..+++.. ...+.++++..+..+++.+.|.+
T Consensus 232 ~~~~~~~~~~~~~~---------------------~~~~~~~~~q~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~L~~ 288 (357)
T TIGR03539 232 DPALVAELLTVRKH---------------------AGLMVPAPVQAAMVAALGDD--GHVAEQKARYAARRAQLKPALEK 288 (357)
T ss_pred CHHHHHHHHHHHhh---------------------cccCCCHHHHHHHHHHcCCH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888766533210 11234555555555555421 12456667777777888888876
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 289 ~ 289 (357)
T TIGR03539 289 A 289 (357)
T ss_pred c
Confidence 4
No 183
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.90 E-value=1.5e-22 Score=191.66 Aligned_cols=218 Identities=20% Similarity=0.226 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+...+++++++++.|.+. . +.++|+++|+..++.++ +++||+|+++++.|.+.+..+...++..|++++.++
T Consensus 60 ~p~~~~Le~~lA~~~g~~~--~-i~~~sG~~Ai~~~l~al----l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d 132 (388)
T PRK07811 60 NPTRTALEEQLAALEGGAY--G-RAFSSGMAATDCLLRAV----LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVD 132 (388)
T ss_pred CccHHHHHHHHHHHhCCCc--e-EEeCCHHHHHHHHHHHH----hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeC
Confidence 3456689999999999874 3 44456689999999998 899999999999999877666666666788888887
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++++++++++++++|++++++||||.+.++++|.++|+++|+++|+|++++.+.....+ ..+.|++++|++
T Consensus 133 ~~-----d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~~~~~~p~-~~gaDivv~S~s 206 (388)
T PRK07811 133 LS-----DLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFASPYLQQPL-ALGADVVVHSTT 206 (388)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCccccCCch-hhCCcEEEecCc
Confidence 64 899999999999999999999999999999999999999999999999999977542222 357899999999
Q ss_pred CcCCCCc---ceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|+++++| .|++++++ ++.+.++......+. +.+... ...++.-++. +...
T Consensus 207 K~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~---------------------~~s~~~---a~l~~~~L~t--l~~R 260 (388)
T PRK07811 207 KYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGA---------------------VPGPFD---AYLTLRGLKT--LAVR 260 (388)
T ss_pred eeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCC---------------------CCCHHH---HHHHHhccCc--HHHH
Confidence 9887654 68888764 444444422211110 111111 1222222232 4444
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+++..+.++|++++++
T Consensus 261 ~~~~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 261 MDRHSENAEAVAEFLAGHPEV 281 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCe
Confidence 566777888999999888764
No 184
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=2.7e-22 Score=189.23 Aligned_cols=170 Identities=24% Similarity=0.284 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+..+++++.+++++|.+ +++++++++.|+..++. + +++||+|+++++.|.++...+...++..|++++.++.
T Consensus 47 p~~~~le~~la~l~g~~---~~l~~~sG~~al~~~l~-l----l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~ 118 (378)
T TIGR01329 47 PTRTALESLLAKLDKAD---RAFAFSSGMAALDVITR-L----LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT 118 (378)
T ss_pred hHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHH-H----hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC
Confidence 34668999999999984 55666667789988775 5 7899999999999998877777777888999999987
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 270 (368)
. |++++++++++++++|++++++||+|.+.|+++|+++|+++|+++++|++++.+.....+ .++.|++++|++|
T Consensus 119 ~-----d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~l-~~g~Di~v~S~tK 192 (378)
T TIGR01329 119 T-----DLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNPL-ELGADIVYHSATK 192 (378)
T ss_pred C-----CHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChh-hcCCcEEEEecce
Confidence 5 899999999999999999999999999999999999999999999999999877543233 4579999999999
Q ss_pred cC-CCCc--ceEEEEccc-ccccCCCcc
Q 017640 271 MC-GPTG--IGFLFGKSD-LLSAMPPFL 294 (368)
Q Consensus 271 ~~-g~~G--~G~l~~~~~-li~~l~~~~ 294 (368)
++ |+.+ .|+++++++ +.+++++..
T Consensus 193 ~l~G~~~~~~G~v~~~~~~~~~~~~~~~ 220 (378)
T TIGR01329 193 FLAGHSDVMAGVLAVKGEEIAKKVYFLQ 220 (378)
T ss_pred eccCCccceeEEEEeCcHHHHHHHHHHH
Confidence 65 4555 899988654 435555443
No 185
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=1.2e-21 Score=185.23 Aligned_cols=260 Identities=13% Similarity=0.120 Sum_probs=182.0
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
..+...+++.+.+.... ... .+...++++.+++++|.+ .+++++|+|+|+.+++.++ .+++||
T Consensus 12 ~~~~e~~~~~~~l~~~~-------~~~----g~~~~~le~~la~~~g~~---~~v~~~sgt~al~lal~al---~~~~Gd 74 (379)
T PRK11658 12 MGDEELAAVKEVLRSGW-------ITT----GPKNQALEQAFCQLTGNQ---HAIAVSSATAGMHITLMAL---GIGPGD 74 (379)
T ss_pred CCHHHHHHHHHHHHcCC-------ccC----CHhHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHc---CCCCCC
Confidence 34556777777665321 111 234668999999999986 5788999999999999988 478999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|++++++|.++.. .+...|++++.++++++ +.+|++.+++++++++++|+.. +++|...|+++|.++|++|
T Consensus 75 ~Viv~~~~~~~~~~----~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~~~---~~~G~~~d~~~i~~~a~~~ 147 (379)
T PRK11658 75 EVITPSLTWVSTLN----MIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAIIPV---HYAGAPADLDAIRAIGERY 147 (379)
T ss_pred EEEECCCcHHHHHH----HHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEEEe---CCCCCcCCHHHHHHHHHHc
Confidence 99999998888643 34556999999999855 5789999999999999988744 4699999999999999999
Q ss_pred CCEEEEecCCcCCcccc--cCCCCCccEEEecCcCcCCCCcceEEEEc-ccccccCCCcccCCcceeecccCC-CCCCCC
Q 017640 238 GAKVLVDACQSVPHMVV--DVQGLDADFLVASSHKMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDH-STFADP 313 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~--~~~~~~~d~~~~s~~K~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~-~~~~~~ 313 (368)
|+++|+|++|++|.... .....+.++++++.+|.+.....|+++.+ +++.+++++....|... ..+... ....+.
T Consensus 148 gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l~~g~GG~v~~~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~ 226 (379)
T PRK11658 148 GIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNITCAEGGLVVTDDDELADRLRSLKFHGLGV-DAFDRQTQGRAPQ 226 (379)
T ss_pred CCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcCcccCceEEEECCHHHHHHHHHHHHcCCCc-chhhhhcccCCCc
Confidence 99999999999887532 23445566677777785532225777764 67777777544333221 111000 000001
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 314 PSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 314 ~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
...+..|+-. .+..+.+|+.+.+..+++.+.++.+++++++.+.|.++++
T Consensus 227 ~~~~~~G~n~--~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~ 276 (379)
T PRK11658 227 AEVLTPGYKY--NLADINAAIALVQLAKLEALNARRREIAARYLQALADLPF 276 (379)
T ss_pred ceeecccccc--CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 1122333311 1235566666666667899999999999999999987643
No 186
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=3e-22 Score=189.69 Aligned_cols=175 Identities=19% Similarity=0.270 Sum_probs=144.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE
Q 017640 108 KATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (368)
Q Consensus 108 ~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 187 (368)
...+..+++++.+++++|.+. .+++ ++|+.++..++. + +++||+|+++++.|++++..+...++..|++++.
T Consensus 51 ~~~p~~~~le~~lA~l~g~~~--~v~~-~sG~~ai~~~l~-~----l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 51 SGNPTREALEDIIAELEGGTK--GFAF-ASGMAAISTAFL-L----LSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred CCChhHHHHHHHHHHHhCCCC--eEEE-CCHHHHHHHHHH-H----hCCCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 345667789999999999872 5555 555678888875 5 7899999999999999888888888889999999
Q ss_pred EeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEec
Q 017640 188 LNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (368)
Q Consensus 188 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s 267 (368)
++.. |++++++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+...... .+++|+++.|
T Consensus 123 v~~~-----d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~~~-~~g~Divv~S 196 (390)
T PRK08064 123 VDMT-----NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLTPLLQKPL-DLGADVVLHS 196 (390)
T ss_pred ECCC-----CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCcccccCch-hhCCcEEEee
Confidence 9875 799999999999999999999999999999999999999999999999999876542222 4579999999
Q ss_pred CcCcCC-CCc--ceEEEEc-ccccccCCCcccC
Q 017640 268 SHKMCG-PTG--IGFLFGK-SDLLSAMPPFLGG 296 (368)
Q Consensus 268 ~~K~~g-~~G--~G~l~~~-~~li~~l~~~~~g 296 (368)
++|+++ +.| .|+++++ +++++.+++...+
T Consensus 197 ~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~ 229 (390)
T PRK08064 197 ATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNS 229 (390)
T ss_pred cceeccCCccceeEEEEeCCHHHHHHHHHHHHh
Confidence 999765 554 5888876 4677777655543
No 187
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.90 E-value=2.4e-21 Score=185.47 Aligned_cols=262 Identities=15% Similarity=0.180 Sum_probs=181.9
Q ss_pred CCeEEeccCC-CC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAA-TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~-~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.+++|..+. .+ ..+|.+.+++.+.+..+..... .....++..+...++++.+++++|.+ ..+++ +++++++.
T Consensus 46 ~~~~~~~s~dylgl~~~p~v~~a~~~~~~~~~~~~~--~s~~~~g~~~~~~~l~~~la~~~g~~--~~~~~-~sG~~an~ 120 (407)
T PRK09064 46 REVTVWCSNDYLGMGQHPKVIEAMIEALDRCGAGAG--GTRNISGTNHYHVELERELADLHGKE--AALVF-TSGYVSND 120 (407)
T ss_pred ceEEEEECCCCcCCCCCHHHHHHHHHHHHHcCCCCC--CcCcCccCHHHHHHHHHHHHHHhCCC--cEEEE-CcHHHHHH
Confidence 3456665543 33 4588899999998887643221 11111223566778999999999963 24444 55567888
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----cCceEEEEccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISN 219 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n 219 (368)
.++..+. ...+++.|+.....|.+....+ +..++++..++.. |++++++.++ +++++|++++++|
T Consensus 121 ~ai~~l~--~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~v~s 189 (407)
T PRK09064 121 ATLSTLA--KLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYS 189 (407)
T ss_pred HHHHHHh--CCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCC-----CHHHHHHHHHhccCCCCeEEEEeCCCC
Confidence 8777652 1346777777766666654433 3457777666653 7788888775 4679999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-c----c-cCCC--CCccEEEecCcCcCCCCcceEEEEcccccccCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-V----V-DVQG--LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~----~-~~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~ 291 (368)
++|.+.|+++|.++|++||+++++|++|+.|.. + + +... ..+|++++|++|.||+.| |++++++++++.+.
T Consensus 190 ~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G-G~~~~~~~~~~~l~ 268 (407)
T PRK09064 190 MDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG-GYIAGSAALVDAVR 268 (407)
T ss_pred CCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC-ceEecCHHHHHHHH
Confidence 999999999999999999999999999985532 1 0 1111 246899999999999887 99999988877654
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
....+ ..+. ++.+....+++.++++++++. ...+++..++.+++.+.|.+. |+
T Consensus 269 ~~~~~------------------~~~t-~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~ 321 (407)
T PRK09064 269 SYAPG------------------FIFT-TSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GI 321 (407)
T ss_pred HhCcc------------------cccc-CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CC
Confidence 33211 1122 234455667777888888764 455688889999999999874 44
No 188
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.89 E-value=3.4e-22 Score=188.51 Aligned_cols=217 Identities=20% Similarity=0.215 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.++++.|.+ ++++++|+++|+..++.++ +++||+|++..+.|.+.+..+..+++..+.++..++
T Consensus 50 ~p~~~~le~~lA~l~g~~---~v~~~~gg~~Ai~~~l~al----l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d 122 (382)
T TIGR02080 50 NPTRDLLQQALAELEGGA---GAVVTNTGMSAIHLVTTAL----LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVD 122 (382)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEEC
Confidence 344558999999999943 7899999999999999998 899999999999999887777776666677887775
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++.+++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+.....+ ..+.|+++.|++
T Consensus 123 ~~-----d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~pl-~~gaDivv~S~s 196 (382)
T TIGR02080 123 QG-----DEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNPL-ALGADLVLHSCT 196 (382)
T ss_pred CC-----CHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCCEEEeecc
Confidence 32 899999999999999999999999999999999999999999999999999876542222 347899999999
Q ss_pred CcCC-CCc--ceEEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCG-PTG--IGFLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g-~~G--~G~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|+++ +.+ .|++++ ++++++.++.+..- ...+.+... ....+.-++. +...
T Consensus 197 K~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~---------------------~g~~~sp~~---a~l~lr~l~t--l~~R 250 (382)
T TIGR02080 197 KYLNGHSDVIAGAVIAKDPQVAEELAWWANN---------------------LGVTGGAFD---SYLTLRGLRT--LVAR 250 (382)
T ss_pred eeccCCCCceeEEEEeCCHHHHHHHHHHHHc---------------------cCCCCCHHH---HHHHHcccch--HHHH
Confidence 9765 555 788777 45565555422210 001222221 1122333333 2333
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 017640 346 HAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g 365 (368)
.++..+.+..+.++|++.+.
T Consensus 251 ~~~~~~na~~~a~~L~~~p~ 270 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPL 270 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCC
Confidence 45666888888888887764
No 189
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.89 E-value=1.1e-21 Score=189.21 Aligned_cols=222 Identities=17% Similarity=0.214 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHc----CCC-CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEE
Q 017640 112 EYELARKKVAAFI----NAS-DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (368)
Q Consensus 112 ~~~~~r~~la~~~----~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 186 (368)
....+|+.+++++ |.. .+++|++|+|+++|+.++.+.+ ++|||+|++.+|+|++.. .+.+..|++++
T Consensus 133 G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l----~~pGd~v~vE~PtY~~~~----~~~~~~g~~~~ 204 (459)
T COG1167 133 GLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLL----LDPGDTVLVEDPTYPGAL----QALEALGARVI 204 (459)
T ss_pred CcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHh----CCCCCEEEEcCCCcHHHH----HHHHHcCCcEE
Confidence 3445666666655 443 2349999999999999999998 899999999999888854 44566699999
Q ss_pred EEeCCCCCCCCHHHHHHhccc-CceEE-EEcccccccccccCH---HHHHHHHHhcCCEEEEecCCcCCcc----c---c
Q 017640 187 FLNLNDDESPDLDKLKEMLSR-KTKLV-VIHHISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPHM----V---V 254 (368)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~-~~~~v-~~~~~~n~tG~~~~l---~~i~~l~~~~g~~li~D~a~~~~~~----~---~ 254 (368)
.||++++|. |+++|++.+.. ++|++ ++++.+||||.+++. ++|.++|++||++||.|+.|+.-.. + .
T Consensus 205 ~vp~d~~G~-~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~ 283 (459)
T COG1167 205 PVPVDEDGI-DPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLK 283 (459)
T ss_pred ecCCCCCCC-CHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChH
Confidence 999986665 99999999976 46654 588889999999994 5999999999999999999883211 1 1
Q ss_pred cCCCCCccEEEecCcCcCCCCc-ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 017640 255 DVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAA 333 (368)
Q Consensus 255 ~~~~~~~d~~~~s~~K~~g~~G-~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~a 333 (368)
.++..+..++++||||.+.|.- +||+++++++++.+..... .....++.....++..-
T Consensus 284 ~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~---------------------~~~~~~s~~~Q~~la~~ 342 (459)
T COG1167 284 ALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQ---------------------AADLGPSSLSQAALAAF 342 (459)
T ss_pred hhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHH---------------------HhcCCCChHHHHHHHHH
Confidence 2344578899999999777654 9999999998887663331 11113344444444333
Q ss_pred HH--HHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 334 ID--YLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 334 l~--~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
+. .+.+ -+.++++..++..+.+.+.|.+..
T Consensus 343 l~~G~~~~-hl~~lR~~y~~rr~~l~~~L~~~~ 374 (459)
T COG1167 343 LLSGHYDR-HLRRLRREYARRRDALLEALAEYL 374 (459)
T ss_pred HHcCCHHH-HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 33 1222 267778888888888888888775
No 190
>PLN02263 serine decarboxylase
Probab=99.89 E-value=3.7e-21 Score=181.99 Aligned_cols=235 Identities=11% Similarity=-0.030 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCC-CcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEE
Q 017640 108 KATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (368)
Q Consensus 108 ~~~~~~~~~r~~la~~~~~~~~-~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 186 (368)
...++..++-+++++++|.+++ ...++|+|+|+++..++.+.+. ..+...+++++..|+| +.+.++..|.+++
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe--~~~~~vvy~S~~aH~S----v~KAa~llgi~~~ 203 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYS----VFKAARMYRMECV 203 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHh--hcCCcEEEEcCCccHH----HHHHHHhcCCcce
Confidence 4678888999999999999753 2579999999999999988643 2234478889998888 4566777899999
Q ss_pred EEeCCCCCCCCHHHHHHhcccC---ceEEEEcccccccccccCHHHHHHHHHhcCC-----EEEEecCCcCCccc-----
Q 017640 187 FLNLNDDESPDLDKLKEMLSRK---TKLVVIHHISNMLASILPIEEIVHWSHDVGA-----KVLVDACQSVPHMV----- 253 (368)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~-----~li~D~a~~~~~~~----- 253 (368)
.||.++++.+|+++|+++|.++ +.+|+.+..++++|.+.|+++|.++|+++|+ ++++|+|++....|
T Consensus 204 ~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 204 KVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred EeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence 9999999999999999999654 5678889999999999999999999999997 99999999754432
Q ss_pred --ccCCCCCccEEEecCcCcC-CCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017640 254 --VDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGL 330 (368)
Q Consensus 254 --~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~ 330 (368)
+++.. .+|.++.++||++ .|.++|++++|++.++.+.... .+... ...--.|+.+....+.+
T Consensus 284 ~~~df~~-~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~------~Yl~~--------~d~ti~gSR~g~~al~l 348 (470)
T PLN02263 284 PKVTFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV------EYLAS--------RDATIMGSRNGHAPIFL 348 (470)
T ss_pred cccCCCc-CccEEEECCccccCCCcCEEEEEEehhhHhhhccCh------HhhCC--------CCCCcCCCCCcHHHHHH
Confidence 23222 4899999999964 5889999999986653332100 00000 00112556666667778
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 331 GAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 331 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..+++.+...|+.++.+++.++++++.++|+++
T Consensus 349 W~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~ 381 (470)
T PLN02263 349 WYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA 381 (470)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 888888888899999999999999999999886
No 191
>PLN02242 methionine gamma-lyase
Probab=99.89 E-value=1.8e-22 Score=192.25 Aligned_cols=174 Identities=22% Similarity=0.262 Sum_probs=143.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHH-HHHcCCE
Q 017640 106 SAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKTGAN 184 (368)
Q Consensus 106 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~-~~~~g~~ 184 (368)
+....+..+++++.+++++|.+ .+++++|+++|+..++.++ +++||+|++..+.|.+....+... .+..|++
T Consensus 71 ~r~~~Pt~~~LE~~lA~l~g~~---~~l~~~sG~~Ai~~al~al----~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~ 143 (418)
T PLN02242 71 SRHFNPTVLNLGRQMAALEGTE---AAYCTASGMSAISSVLLQL----CSSGGHVVASNTLYGGTHALLAHFLPRKCNIT 143 (418)
T ss_pred cCCCChhHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH----hCCCCEEEEcCCcHHHHHHHHHHhhhhccCce
Confidence 3334566778999999999986 5578999999999999988 899999999999887765444332 2346888
Q ss_pred EEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccE
Q 017640 185 LKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADF 263 (368)
Q Consensus 185 v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~ 263 (368)
+++++.. |++.+++++++ ++++|++++++||||.+.++++|.++|++||+++|+|++|+.... +...++.|+
T Consensus 144 ~~~~d~~-----d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~~~--~~~~~g~di 216 (418)
T PLN02242 144 TTFVDIT-----DLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPMVL--SPARLGADV 216 (418)
T ss_pred EEEcCCC-----CHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCccCC--CHHHcCCcE
Confidence 8888765 89999999988 599999999999999999999999999999999999999974332 333457899
Q ss_pred EEecCcCcCCCCc---ceEEEEcccccccCCCc
Q 017640 264 LVASSHKMCGPTG---IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 264 ~~~s~~K~~g~~G---~G~l~~~~~li~~l~~~ 293 (368)
++.|++|.+++.| +|++++++++++.++..
T Consensus 217 vv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~ 249 (418)
T PLN02242 217 VVHSISKFISGGADIIAGAVCGPAELVNSMMDL 249 (418)
T ss_pred EEEeCccccCCCCCceEEEEEcCHHHHHHHHHH
Confidence 9999999988776 59999998888776644
No 192
>PRK04311 selenocysteine synthase; Provisional
Probab=99.89 E-value=4.1e-21 Score=183.82 Aligned_cols=214 Identities=19% Similarity=0.259 Sum_probs=161.3
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
..+.+|+++.+.++.++.+.+++.+++..+. +.... ...+. ..+..+.+++.+++++|++ ..+++++++.|+.+
T Consensus 84 atg~v~~tNlg~s~l~~~v~eav~~~~~~~~-~le~~-l~~g~-~g~r~~~~e~~lA~l~Gae---~a~vv~sgtaAl~l 157 (464)
T PRK04311 84 ATGVVLHTNLGRALLSEAAIEAVTEAARGYS-NLEYD-LATGK-RGSRDRALAALLCALTGAE---DALVVNNNAAAVLL 157 (464)
T ss_pred CCccEEeccCCCCCCCHHHHHHHHHHHhccc-ccccc-hhhcc-cchHHHHHHHHHHHHhCCC---eEEEECCHHHHHHH
Confidence 4677777777778999999999998876542 21100 11111 1344668999999999986 45777788899999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCccc--HHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccc--
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSA--IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM-- 220 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~--~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~-- 220 (368)
++.+ +.+||+|++++.+|..+ ...+....+..|+++++|+.+ +..++++++++++++|++|++.+++|+
T Consensus 158 ~l~~-----l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~--~~t~~~dle~aI~~~TklV~~vh~sN~~i 230 (464)
T PRK04311 158 ALNA-----LAAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT--NRTHLRDYEQAINENTALLLKVHTSNYRI 230 (464)
T ss_pred HHHH-----hCCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC--CCCCHHHHHHhcCccCeEEEEEcCCCccc
Confidence 8865 47899999998876632 112344567789999999764 234789999999999999999999998
Q ss_pred cc--cccCHHHHHHHHHhcCCEEEEecCCcC---------Ccccc--cCCCCCccEEEecCcCcCCCCcceEEEEccccc
Q 017640 221 LA--SILPIEEIVHWSHDVGAKVLVDACQSV---------PHMVV--DVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 287 (368)
Q Consensus 221 tG--~~~~l~~i~~l~~~~g~~li~D~a~~~---------~~~~~--~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li 287 (368)
+| ...|+++|+++||+||+++++|.+++. +..+. +.-..++|++++|++|++|++.+|+++++++++
T Consensus 231 ~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~~G~i~g~~~li 310 (464)
T PRK04311 231 EGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQAGIIVGKKELI 310 (464)
T ss_pred cccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCceEEEEEcHHHH
Confidence 34 567999999999999999999996431 12221 122368999999999988766789999999998
Q ss_pred ccCC
Q 017640 288 SAMP 291 (368)
Q Consensus 288 ~~l~ 291 (368)
+.++
T Consensus 311 ~~l~ 314 (464)
T PRK04311 311 ARLK 314 (464)
T ss_pred HHHh
Confidence 8766
No 193
>PLN02721 threonine aldolase
Probab=99.89 E-value=4.2e-22 Score=187.12 Aligned_cols=209 Identities=16% Similarity=0.168 Sum_probs=153.1
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.+++.|..+....+++.+.+++.+. .. . +. .+. + .....++++.+++++|.+ .+++++++++++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~a~~~~--~~--~-~~-~~~--~--~~~~~~l~~~la~~~~~~---~~~~~~~Gs~a~~~~ 71 (353)
T PLN02721 5 SRVVDLRSDTVTKPTDAMRAAMANA--EV--D-DD-VLG--Y--DPTALRLEEEMAKIFGKE---AALFVPSGTMGNLIS 71 (353)
T ss_pred hhhhhhhcccccCCCHHHHHHHHhc--cC--C-Cc-ccC--C--CHHHHHHHHHHHHHhCCc---eeEEecCccHHHHHH
Confidence 3566777777777788888887543 11 1 10 111 1 222568999999999986 356777777787777
Q ss_pred HHHccCCCCC-CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-------cCceEEEEccc
Q 017640 146 AYSWGLSNLK-SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-------RKTKLVVIHHI 217 (368)
Q Consensus 146 ~~~~~~~~~~-~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-------~~~~~v~~~~~ 217 (368)
+.++ .+ +||+|++++++|.+.+... ..++..|++++.++.++++.+|++.++++++ +++++|+++++
T Consensus 72 l~~~----~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~ 146 (353)
T PLN02721 72 VLVH----CDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENT 146 (353)
T ss_pred HHHH----ccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEecc
Confidence 7776 55 9999999999987655311 1345679999999988888899999999997 57899999775
Q ss_pred -ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccCC--CCCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 218 -SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQ--GLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 218 -~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~--~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
+||+|.++| +++|.++|++||+++++|++|..+.. ..+.. ..+.|.++.|+||+++++..++++.++++++
T Consensus 147 ~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G~~~~~~~~~~~ 226 (353)
T PLN02721 147 HANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGAPVGSVIVGSKSFIR 226 (353)
T ss_pred ccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCCceeeEEecCHHHHH
Confidence 678999988 78999999999999999999875431 11111 2268899999999887653345677888877
Q ss_pred cCCC
Q 017640 289 AMPP 292 (368)
Q Consensus 289 ~l~~ 292 (368)
.+..
T Consensus 227 ~~~~ 230 (353)
T PLN02721 227 KAKR 230 (353)
T ss_pred hHHH
Confidence 6543
No 194
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=3.1e-22 Score=187.70 Aligned_cols=173 Identities=12% Similarity=0.148 Sum_probs=148.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE
Q 017640 105 LSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN 184 (368)
Q Consensus 105 ~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 184 (368)
+++...+..+.+++.++++-|.. ..++++|++.|+..++.++ +++||+|+++...|.+.+..+...+++.|++
T Consensus 56 YsR~~nPt~~~le~~la~LEg~~---~a~~~~SGmaAi~~~~~~l----l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~ 128 (395)
T PRK08114 56 YGRRGTLTHFSLQEAMCELEGGA---GCALYPCGAAAVANAILAF----VEQGDHVLMTGTAYEPTQDFCSKILSKLGVT 128 (395)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC---eEEEEhHHHHHHHHHHHHH----cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcE
Confidence 33344566668999999998875 5577777999999999988 8999999999999999888787778889999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC--CEEEEecCCcCCcccccCCCCCcc
Q 017640 185 LKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHMVVDVQGLDAD 262 (368)
Q Consensus 185 v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g--~~li~D~a~~~~~~~~~~~~~~~d 262 (368)
+.+++.. |.+.++++++++|++|++++++||+|.+.|+++|+++||++| +++++|++++.|.. ++..++++|
T Consensus 129 v~~vd~~-----d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~-~~pl~~GaD 202 (395)
T PRK08114 129 TTWFDPL-----IGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVL-FKALDFGID 202 (395)
T ss_pred EEEECCC-----CHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCccccc-cCHHHcCCc
Confidence 9998864 789999999999999999999999999999999999999984 99999999999877 777788999
Q ss_pred EEEecCcCcCCCCc---ceEEEEcccccccC
Q 017640 263 FLVASSHKMCGPTG---IGFLFGKSDLLSAM 290 (368)
Q Consensus 263 ~~~~s~~K~~g~~G---~G~l~~~~~li~~l 290 (368)
+++.|.+|++++++ +|+++.+++..+.+
T Consensus 203 ivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l 233 (395)
T PRK08114 203 ISIQAGTKYLVGHSDAMIGTAVANARCWEQL 233 (395)
T ss_pred EEEEcCcccccCCCcceeEEEEcCHHHHHHH
Confidence 99999999766553 78777777654433
No 195
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.89 E-value=1.1e-21 Score=187.17 Aligned_cols=263 Identities=14% Similarity=0.098 Sum_probs=172.9
Q ss_pred CCeEEeccCCC---C-CCc--HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcE--
Q 017640 66 KKLVYLDNAAT---S-QKP--IAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEI-- 132 (368)
Q Consensus 66 ~~~i~l~~~~~---~-~~~--~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v-- 132 (368)
++.+.|..+.+ . ..| +.+.+++.+...... ..++.......++|+++++++... .+++|
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~--------~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v 97 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETET--------TKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVAT 97 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccccc--------CCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEE
Confidence 45678888742 1 233 667777666543210 001111233447888888876322 23466
Q ss_pred EEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-C-CCCCCCHHHHHHhcc---c
Q 017640 133 VFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-N-DDESPDLDKLKEMLS---R 207 (368)
Q Consensus 133 ~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~-~~~~~d~~~l~~~l~---~ 207 (368)
++|+|+++|+.+++.++. .+++||+|++.+|.|+.. ...++..|++++.++. + +++.+|++.+++++. +
T Consensus 98 ~iT~Ga~~al~~~~~~l~--~~~pGd~Vlv~~P~y~~~----~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~ 171 (396)
T PRK09257 98 VQTPGGTGALRVGADFLK--RAFPDAKVWVSDPTWPNH----RAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPA 171 (396)
T ss_pred EecCCccHHHHHHHHHHH--HhCCCCeEEECCCCcccH----HHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCC
Confidence 999999999999987652 148999999999988874 4555667999999997 3 347889999999875 3
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-------cc-cCCC-CCccEEEecCcCcCCCC
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-------VV-DVQG-LDADFLVASSHKMCGPT 275 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-------~~-~~~~-~~~d~~~~s~~K~~g~~ 275 (368)
+++++++++++||||.+++ +++|+++|++||+++|+|++|..-.. ++ .+.. ....++++|+||.|+++
T Consensus 172 ~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~ 251 (396)
T PRK09257 172 GDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLY 251 (396)
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccc
Confidence 4577788999999999999 67889999999999999999873111 11 1111 23568899999999998
Q ss_pred c--ceEEEE---ccccc----ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----HhC
Q 017640 276 G--IGFLFG---KSDLL----SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-----TIG 341 (368)
Q Consensus 276 G--~G~l~~---~~~li----~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-----~~g 341 (368)
| +||+++ +++.+ ..+.... +....+++.....++...++.-. +.-
T Consensus 252 GlRiG~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 310 (396)
T PRK09257 252 GERVGALSVVAEDAEEADRVLSQLKATI---------------------RTNYSNPPAHGAAIVATILNDPELRAEWEAE 310 (396)
T ss_pred cccceeEEEEeCCHHHHHHHHHHHHHHh---------------------hhhcCCCcHHHHHHHHHHhCCHHHHHHHHHH
Confidence 8 999974 22322 2222111 01111334444444444443210 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 017640 342 MQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++.++++.++..+.+.+.|++.
T Consensus 311 ~~~~r~~~~~rr~~l~~~L~~~ 332 (396)
T PRK09257 311 LEEMRERIKAMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 4567777888888888888765
No 196
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.89 E-value=4e-21 Score=178.06 Aligned_cols=257 Identities=19% Similarity=0.233 Sum_probs=198.8
Q ss_pred CCeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.+++|-.+.+- .-.+.++++..+.+..+......+ ..-.+..+...++++.||+++|.+. .++|++|- .|+.
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gs--R~i~G~~~~h~~LE~~lA~f~g~e~--al~f~SGy-~AN~ 113 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGS--RLISGTSDLHVELEEELADFLGAEA--ALLFSSGF-VANL 113 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCc--CcccCCcHHHHHHHHHHHHHhCCCc--EEEEcccc-hhHH
Confidence 456666665543 457789999999999874433222 2123346778899999999999983 56666665 6899
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHI 217 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~ 217 (368)
.++.++ .+++|.|+...-+|.|..+. ++..+++++.++.+ |+++||+.+.+ +.++|+++.+
T Consensus 114 ~~i~~l----~~~~dli~~D~lnHASiidG----~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegV 180 (388)
T COG0156 114 GLLSAL----LKKGDLIFSDELNHASIIDG----IRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGV 180 (388)
T ss_pred HHHHHh----cCCCcEEEEechhhhhHHHH----HHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEecc
Confidence 999998 88999999999999996554 45568999999986 99999999976 3589999999
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
.++.|.+.|+++|.+++++||+++++|++|+.|..- +.+.....|+++++++|.||..| |++.++..+++
T Consensus 181 fSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G-g~v~g~~~~~d 259 (388)
T COG0156 181 FSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG-GYIAGSAALID 259 (388)
T ss_pred ccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC-ceeeCcHHHHH
Confidence 999999999999999999999999999999987762 12223356899999999999776 99999998888
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
.++....+ ..| +.+.+....+++..+++.+.+ ....+++..++..++...+..
T Consensus 260 ~L~~~ar~------------------~if-StalpP~~aaa~~~al~~l~~--~~~~r~~L~~~~~~~~~~~~~ 312 (388)
T COG0156 260 YLRNRARP------------------FIF-STALPPAVAAAALAALRILEE--GPERRERLQELAAFFRSLLKA 312 (388)
T ss_pred HHHHhCCc------------------eec-cCCCCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHh
Confidence 76643221 122 235666667778889998886 477788888999988855443
No 197
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.89 E-value=4e-22 Score=188.25 Aligned_cols=217 Identities=17% Similarity=0.223 Sum_probs=159.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.+++++|.+ ++++++|+++|+..++.++ +++||+|+++.+.|.++...+..+ +..|++++.+
T Consensus 51 ~np~~~~lE~~lA~l~g~~---~~l~~~sG~~Ai~~~l~~l----l~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~ 122 (385)
T PRK08574 51 ENPTLRPLEEALAKLEGGV---DALAFNSGMAAISTLFFSL----LKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLA 122 (385)
T ss_pred CCccHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH----hCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEE
Confidence 3455668999999999975 5677788899999999988 899999999999999987666554 6678888776
Q ss_pred eCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEec
Q 017640 189 NLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s 267 (368)
.. |++.+++++++ ++++|++++++||||.+.|+++|.++|+++|+++++|++++.+...-.+ ..+.|++++|
T Consensus 123 ~~------d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l-~~GaDivv~S 195 (385)
T PRK08574 123 YP------STEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLLYRPL-RHGADFVVHS 195 (385)
T ss_pred CC------CHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCChh-hhCCcEEEee
Confidence 43 68899999988 8999999999999999999999999999999999999999877542122 4578999999
Q ss_pred CcCcCCCCc---ceEEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 268 SHKMCGPTG---IGFLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 268 ~~K~~g~~G---~G~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
++|+++++| .|++++ ++++.+.++..... + .+..+... +..++.-++. +.
T Consensus 196 ~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~--------------------~-g~~~~p~~---a~l~l~~l~t--L~ 249 (385)
T PRK08574 196 LTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRR--------------------L-GTIMQPFE---AYLVLRGLKT--LE 249 (385)
T ss_pred CceeecCCCCceeEEEEECcHHHHHHHHHHHHh--------------------c-CCCCCHHH---HHHHHcccCc--HH
Confidence 999887554 475555 55665554422210 0 11222111 1122222222 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC
Q 017640 344 KIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
...++..+++..+.++|++++.+
T Consensus 250 ~R~~~~~~na~~la~~L~~~p~v 272 (385)
T PRK08574 250 VRFERQCRNAMAIAEFLSEHPKV 272 (385)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCc
Confidence 34455666888888888877654
No 198
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.89 E-value=6.1e-21 Score=182.50 Aligned_cols=256 Identities=18% Similarity=0.180 Sum_probs=181.1
Q ss_pred EEeccCCCCC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
.+.+++..+. .+|.|++++.+++..+..+... ........+...++++.+++++|.+ ..++.+++++|+..++.
T Consensus 49 ~~~sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~--s~~~~~~~~~~~~le~~la~~~g~~---~~~~~~SG~~An~~ai~ 123 (406)
T PRK13393 49 VWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGG--TRNISGTNHYHVLLEAELADLHGKE---AALLFTSGYVSNWAALS 123 (406)
T ss_pred EeecccccCCCCCHHHHHHHHHHHHHcCCCCcc--cccccCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHHHHH
Confidence 3444445554 6889999999999876433221 1111122446778999999999974 44444455678999988
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----cCceEEEEccccccccc
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISNMLAS 223 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~ 223 (368)
++. ...+|+.|+.....|.++...+. ..|.+++.++.. |++.+++.+. +++++|++++++|++|.
T Consensus 124 ~l~--~~~~g~~I~~~~~~H~s~~~~~~----~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~ 192 (406)
T PRK13393 124 TLG--SRLPGCVILSDELNHASMIEGIR----HSRAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMDGD 192 (406)
T ss_pred Hhh--cCCCCCEEEEccchhHHHHHHHH----HcCCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCCCc
Confidence 762 12378888888888888765543 347788777754 7777777664 35789999999999999
Q ss_pred ccCHHHHHHHHHhcCCEEEEecCCcCCcc-cc-----cCCC--CCccEEEecCcCcCCCCcceEEEEcccccccCCCccc
Q 017640 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHM-VV-----DVQG--LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~-----~~~~--~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~ 295 (368)
+.|+++|.++|++||+++++|++|+.|.. +. .... .++|+++++++|.+|..| |+++.++++++.++....
T Consensus 193 ~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G-G~~~~~~~~~~~l~~~~~ 271 (406)
T PRK13393 193 IAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG-GYITGSAALCDFIRSFAS 271 (406)
T ss_pred hhCHHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC-ceeeCCHHHHHHHHHhCc
Confidence 99999999999999999999999986552 11 1111 136888899999999877 899888888776553321
Q ss_pred CCcceeecccCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.|. .++.+....+++.++++.+.+.+ ..+++..++.+++.+.|.+.
T Consensus 272 --------------------~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~ 318 (406)
T PRK13393 272 --------------------GFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA 318 (406)
T ss_pred --------------------CceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc
Confidence 111 33566677788889999887643 22456678888888888764
No 199
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.89 E-value=2.6e-21 Score=181.65 Aligned_cols=234 Identities=16% Similarity=0.146 Sum_probs=168.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+...++++.+++++|.+ ++++++|+|+|+..++.++ .+++||+|+++.++|+++...+ ...|++++.+++
T Consensus 18 ~~~~~~~~~la~~~~~~---~~~~~~sgt~al~~~l~~l---~~~~gd~vl~~~~~~~~~~~~~----~~~g~~~~~~~~ 87 (352)
T cd00616 18 PKVREFEKAFAEYLGVK---YAVAVSSGTAALHLALRAL---GIGPGDEVIVPSFTFVATANAI----LLLGATPVFVDI 87 (352)
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHc---CCCCCCEEEeCCcchHHHHHHH----HHcCCeEEEEec
Confidence 34668999999999974 6788899999999999987 3689999999999998865543 456999999999
Q ss_pred CC-CCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccC-CCCCccEEEecC
Q 017640 191 ND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDV-QGLDADFLVASS 268 (368)
Q Consensus 191 ~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~-~~~~~d~~~~s~ 268 (368)
++ ++.+|++++++++++++++|++++ ++|...|+++|.++|+++|+++|+|++|++|....+. -....|+.++|+
T Consensus 88 ~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~ 164 (352)
T cd00616 88 DPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSF 164 (352)
T ss_pred CCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcC
Confidence 87 688999999999988999998875 5899999999999999999999999999988763221 011257888886
Q ss_pred c--CcCCCCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 269 H--KMCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 269 ~--K~~g~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
+ |+++.+.+|+++.++ ++++.+++...++...... .+......+..+.+++...+ ......+++.+
T Consensus 165 ~~~K~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~aa~------~~~~l~~~~~~ 233 (352)
T cd00616 165 HPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRF-----KYEHEILGYNYRLSEIQAAI------GLAQLEKLDEI 233 (352)
T ss_pred CCCCCCcccCceEEEECCHHHHHHHHHHHHcCCCCCCC-----ccccceeeeccCcCHHHHHH------HHHHHHhhHHH
Confidence 6 988543367777764 6766665443322211000 00000111222223322222 22222346778
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCC
Q 017640 346 HAYEVKWIICSIIVIQERHNTTL 368 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~t~ 368 (368)
.++.+++.+++.+.|.+++|+++
T Consensus 234 ~~~~~~~~~~~~~~L~~~~g~~~ 256 (352)
T cd00616 234 IARRREIAERYKELLADLPGIRL 256 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCCccC
Confidence 88999999999999998877653
No 200
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=3.7e-21 Score=185.46 Aligned_cols=284 Identities=15% Similarity=0.104 Sum_probs=189.3
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHH-HhhccCCCCcchhhHHHH-HHHHHHHHHHHHHcCCCCCCcEEE---eCCHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYE-AYNSNVHRGIHFLSAKAT-DEYELARKKVAAFINASDSGEIVF---TKNATEA 141 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~r~~la~~~~~~~~~~v~~---t~g~t~a 141 (368)
..+.|=.+. ...++.+++++...+. .+........+..|.... ++.+..++..+++|+.... .+.+ ..+++.|
T Consensus 35 ~~l~liase-n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~-~~~~nv~~~SG~~A 112 (475)
T PLN03226 35 KGLELIASE-NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPE-KWGVNVQPLSGSPA 112 (475)
T ss_pred cCeeEecCC-ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcc-eeEEecCcCchHHH
Confidence 334554433 4678899999998884 333222222333333333 3343466678888988754 3333 3677889
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCC---CCcccHHHHHHHHHHcCCEE--E--EEeCC-CCCCCCHHHHHHhccc-CceEE
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVA---EHHSAIVPWQLVAQKTGANL--K--FLNLN-DDESPDLDKLKEMLSR-KTKLV 212 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~---~~~s~~~~~~~~~~~~g~~v--~--~v~~~-~~~~~d~~~l~~~l~~-~~~~v 212 (368)
+..++.++ +++||+|+..+. .|.+.... ....+..+..+ . .+.++ +++.+|+++|++++.. ++++|
T Consensus 113 N~av~~aL----~~pgD~Il~~d~~~gGhl~H~~~-~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklI 187 (475)
T PLN03226 113 NFAVYTAL----LQPHDRIMGLDLPHGGHLSHGYQ-TDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLI 187 (475)
T ss_pred HHHHHHHh----CCCCCEEEECCCCcCcchhhhhh-hcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEE
Confidence 99999998 899999998553 33332111 10011111221 2 23334 4689999999998864 67766
Q ss_pred EEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCC---CCCccEEEecCcCcC-CCCcceEEEEcccccc
Q 017640 213 VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ---GLDADFLVASSHKMC-GPTGIGFLFGKSDLLS 288 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~---~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~ 288 (368)
++. . +.+|...|+++|.++|+++|+++++|++|++|....+.. ..++|++++++||++ ||.| |+++++++.++
T Consensus 188 v~~-~-S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~ 264 (475)
T PLN03226 188 IAG-A-SAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFEYCDVVTTTTHKSLRGPRG-GMIFFRKGPKP 264 (475)
T ss_pred EEe-c-CcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCCCCeEEEecCcccccCCCc-eEEEEchhhcc
Confidence 553 2 347899999999999999999999999999988755432 126999999999966 8888 89999888765
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+++...++..... ..+...+ ..+ .|+++...++++.++++++.+.+.+.+++++.++++++.+.|.+ .|++
T Consensus 265 ~~~~g~~~~~d~~~-~i~~a~~----~~~-~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~ 336 (475)
T PLN03226 265 PKGQGEGAVYDYED-KINFAVF----PGL-QGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYK 336 (475)
T ss_pred cccCCCccHHHHHH-HhccccC----Ccc-CCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCE
Confidence 54332111000000 0010000 123 46799999999999999999989999999999999999999988 4654
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=8.9e-22 Score=186.48 Aligned_cols=170 Identities=15% Similarity=0.177 Sum_probs=143.3
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.++++.|.+ ++++++|+++|+.+++.++ +++||+|+++++.|.++...+...++..|++++++
T Consensus 63 ~~pt~~~Le~~lA~l~g~~---~~l~~~sgt~Ai~~~l~al----~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v 135 (394)
T PRK07050 63 ATPTSLALAQRLAEIEGGR---HALLQPSGLAAISLVYFGL----VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY 135 (394)
T ss_pred CCHHHHHHHHHHHHHhCCC---eEEEeccHHHHHHHHHHHH----hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE
Confidence 3455678999999999964 7899999999999999998 89999999999999988776666778889999988
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.. +.+.+++++++++++|++++++||+|.+.++++|.++|+++|+++++|++|+.+.. ......+.|+++.|+
T Consensus 136 d~~-----~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~~~~-~~~l~~GaDi~v~S~ 209 (394)
T PRK07050 136 DPL-----IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSAGLA-FKPFEHGVDISVQAL 209 (394)
T ss_pred CCC-----CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCcccccc-cCHHHcCCeEEEEEC
Confidence 753 45789999999999999999999999999999999999999999999999998764 222345789999999
Q ss_pred cCcCCCCc---ceEEEE-cccccccCC
Q 017640 269 HKMCGPTG---IGFLFG-KSDLLSAMP 291 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~-~~~li~~l~ 291 (368)
+|.++..+ +|++++ +++++++++
T Consensus 210 tK~~~g~~~~~gG~v~~~~~~~~~~~~ 236 (394)
T PRK07050 210 TKYQSGGSDVLMGATITADAELHAKLK 236 (394)
T ss_pred CceecCCCCeeEEEEEECCHHHHHHHH
Confidence 99776443 676666 556666554
No 202
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=1.6e-21 Score=181.73 Aligned_cols=207 Identities=16% Similarity=0.164 Sum_probs=149.6
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC
Q 017640 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD 193 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~ 193 (368)
.++|+.+++++|.+++++|++|+|+++++..+.. + +++|+ |++.+|+|+. +...++..|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~-~----~~~g~-v~v~~P~y~~----y~~~~~~~g~~~~~v~~~~- 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA-L----LPRGR-VGIAPLAYSE----YAPAFARHGHRVVPLDEAA- 124 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH-h----cCCCe-EEEcCCCcHH----HHHHHHHCCCEEEeecccc-
Confidence 3899999999999854699999999999987654 4 56776 8889996665 5666677799999888653
Q ss_pred CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHH---HHhcCCEEEEecCCcCCcc--cc-cCCCCCccEEEec
Q 017640 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHW---SHDVGAKVLVDACQSVPHM--VV-DVQGLDADFLVAS 267 (368)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l---~~~~g~~li~D~a~~~~~~--~~-~~~~~~~d~~~~s 267 (368)
+. +.+.++++++++|+||||.+++.+++.++ |++++.++|+|++|.-... ++ .+......+++.|
T Consensus 125 -----~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~S 195 (339)
T PRK06959 125 -----DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRS 195 (339)
T ss_pred -----hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEec
Confidence 22 22345789999999999999996655554 5678999999999884321 11 1212234588899
Q ss_pred CcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 268 SHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 268 ~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
+||.||.+| +||+++++++++.+......+ +.+.....++..+++.-. -.+.+
T Consensus 196 fSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~-----------------------~vs~~~q~a~~~~L~~~~--~~~~~ 250 (339)
T PRK06959 196 VGKFFGLAGVRAGFVLAAPALLAALRDALGAW-----------------------TVSGPARHAVRAAFADAA--WQAAM 250 (339)
T ss_pred ChhhcCCcchheEEEecCHHHHHHHHHhcCCC-----------------------CCcHHHHHHHHHHhCcHH--HHHHH
Confidence 999999888 999999999988776443211 234445555555554211 14566
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+++..+..+++.+.|++. |+
T Consensus 251 ~~~~~~~r~~l~~~L~~~-g~ 270 (339)
T PRK06959 251 RERLAADGARLAALLRAH-GF 270 (339)
T ss_pred HHHHHHHHHHHHHHHHHC-CC
Confidence 777788888888888775 44
No 203
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.89 E-value=2.9e-21 Score=185.78 Aligned_cols=259 Identities=15% Similarity=0.113 Sum_probs=177.2
Q ss_pred CCeEEeccCCC--CCCcH----HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAAT--SQKPI----AVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~--~~~~~----~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
.+++.|..+.. ...++ .+.+++.+++..- .. .+.......++|++++++++.+ .+++|+|++
T Consensus 36 ~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g--~~-------~Y~~~~g~~~Lreaia~~~~~~---~vv~t~ggt 103 (460)
T PRK13238 36 YNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRG--DE-------AYAGSRSYYRLEDAVKDIFGYP---YTIPTHQGR 103 (460)
T ss_pred CCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhC--Cc-------ccCCCCCHHHHHHHHHHHhCCC---cEEECCCHH
Confidence 46677777665 32222 4666666666421 10 0111334558999999999975 789999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--------C--CCCCHHHHHHhccc--
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--------D--ESPDLDKLKEMLSR-- 207 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--------~--~~~d~~~l~~~l~~-- 207 (368)
+|+..++.++ +++|| |++++|.|.+. ....+..|++++.+++++ + |.+|++.|++.+++
T Consensus 104 ~A~~~~~~al----l~pGD-Vii~~p~~~~~----~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~ 174 (460)
T PRK13238 104 AAEQILFPVL----IKKGD-VVPSNYHFDTT----RAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG 174 (460)
T ss_pred HHHHHHHHHh----CCCCC-EEccCCcccch----HHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcC
Confidence 9999999988 99999 88888855553 334456799999999863 2 44999999999984
Q ss_pred --CceEEEEcccccccc-cccC---HHHHHHHHHhcCCEEEEecCCcCC-----------cccccCC------CCCccEE
Q 017640 208 --KTKLVVIHHISNMLA-SILP---IEEIVHWSHDVGAKVLVDACQSVP-----------HMVVDVQ------GLDADFL 264 (368)
Q Consensus 208 --~~~~v~~~~~~n~tG-~~~~---l~~i~~l~~~~g~~li~D~a~~~~-----------~~~~~~~------~~~~d~~ 264 (368)
++++|++++++|||| .+++ +++|.++|++||+++|.|+++..+ ....++. ....|++
T Consensus 175 ~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~ 254 (460)
T PRK13238 175 AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGL 254 (460)
T ss_pred CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEE
Confidence 689999999999998 8887 579999999999999999988542 1111111 1247999
Q ss_pred EecCcC-cCCCCcceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 265 VASSHK-MCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 265 ~~s~~K-~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
+.|.+| .+++.| |+++.+ +++++.++...... ..+ ..|..+...+.|++.+++...+
T Consensus 255 ~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~~-----------------~g~~t~~g~~~~~~~Ala~~l~e~~~-- 314 (460)
T PRK13238 255 TMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCILY-----------------EGFPTYGGLAGRDMEALAVGLYEGMD-- 314 (460)
T ss_pred EEecccCCCCcce-eEEEcChHHHHHHhhhccccc-----------------CCcccccCcHHHHHHHHHhhHHHhhC--
Confidence 999999 566766 888888 57877776553211 011 2334455556667666654322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 342 MQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+.+ ++..+.++++.+.|.+. |+.
T Consensus 315 ~~~~-~~~~~~~~~l~~~L~~~-G~~ 338 (460)
T PRK13238 315 EDYL-AYRIGQVEYLGEGLEEA-GVP 338 (460)
T ss_pred hHHH-HHHHHHHHHHHHHHHHC-CCC
Confidence 1222 22233467888888765 543
No 204
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=9.2e-22 Score=183.14 Aligned_cols=165 Identities=14% Similarity=0.174 Sum_probs=130.4
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC
Q 017640 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD 193 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~ 193 (368)
.++|+++++++|.++. +|++|+|+++++.+++. + +++|+ |++.+|+|+. +...++..|++++.+|+++
T Consensus 43 ~~lr~~ia~~~~~~~~-~I~it~Gs~~~l~~~~~-~----~~~~~-vv~~~P~y~~----y~~~~~~~G~~v~~vp~~~- 110 (332)
T PRK06425 43 TDIEDQIKIYTQGLKI-KVLIGPGLTHFIYRLLS-Y----INVGN-IIIVEPNFNE----YKGYAFTHGIRISALPFNL- 110 (332)
T ss_pred HHHHHHHHHHhCCCcc-eEEECCCHHHHHHHHHH-H----hCCCc-EEEeCCChHH----HHHHHHHcCCeEEEEeCCc-
Confidence 3899999999999875 89999999999999986 4 45665 6666896555 6677778899999999875
Q ss_pred CCCCHHHHHHhcccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----c-ccC-CCCCccEE
Q 017640 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----V-VDV-QGLDADFL 264 (368)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~-~~~-~~~~~d~~ 264 (368)
..+|.+.+++ .++++|++++|+||||.+++ +++|.++|++||++||+|++|..-.. + ... ...+..++
T Consensus 111 ~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~ 187 (332)
T PRK06425 111 INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVII 187 (332)
T ss_pred ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEE
Confidence 3346665543 37899999999999999999 66778888999999999999872211 1 111 22346789
Q ss_pred EecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 265 VASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 265 ~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
++|+||.||.+| +||+++++++++.+...
T Consensus 188 ~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~ 218 (332)
T PRK06425 188 GRSLTKILGIPSLRIGYIATDDYNMKISRKI 218 (332)
T ss_pred EeecHHhcCCchhhheeeecCHHHHHHHHHc
Confidence 999999999888 99999999988776643
No 205
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=8.8e-22 Score=188.03 Aligned_cols=161 Identities=22% Similarity=0.324 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.+++.++++.|.+ ..++++|++.|+..++.++ +++||+|+++.+.|++++..+...++..|+++++++
T Consensus 63 ~p~~~~Le~~lA~leg~~---~al~~~sG~~Ai~~al~~l----l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd 135 (431)
T PRK08248 63 NPTTDVFEKRIAALEGGI---GALAVSSGQAAITYSILNI----ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVD 135 (431)
T ss_pred CchHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEEC
Confidence 345668999999999965 5688999999999999887 899999999999999988888888888999999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++.+++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+....++ .+++|+++.|++
T Consensus 136 ~~-----d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl-~~gaDivv~S~t 209 (431)
T PRK08248 136 PS-----DPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPI-EHGADIVVHSAT 209 (431)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChh-HcCCCEEEEcCc
Confidence 74 899999999999999999999999999999999999999999999999999865443333 578999999999
Q ss_pred CcCCCCc--ceEEEEc
Q 017640 270 KMCGPTG--IGFLFGK 283 (368)
Q Consensus 270 K~~g~~G--~G~l~~~ 283 (368)
|++|++| +|.+++.
T Consensus 210 K~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 210 KFIGGHGTSIGGVIVD 225 (431)
T ss_pred cccCCCCCceEEEEEe
Confidence 9999887 6666553
No 206
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.88 E-value=8.2e-22 Score=185.46 Aligned_cols=217 Identities=17% Similarity=0.184 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
....+++++.++++.|.+. .++++|+++|+..++ .+ +++||+|++.++.|++.+..+...++..|++++.++
T Consensus 51 ~pt~~~le~~la~l~g~~~---~~~~~sG~~ai~~~~-~l----l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd 122 (366)
T PRK08247 51 NPTRGVLEQAIADLEGGDQ---GFACSSGMAAIQLVM-SL----FRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVN 122 (366)
T ss_pred CchHHHHHHHHHHHhCCCc---EEEEcCHHHHHHHHH-HH----hCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEEC
Confidence 4456789999999999974 377778889998876 45 689999999999999988777777778899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++.+++++++++++|++++|+||+|...++++|.++|++||+++|+|++|+.+...... ..+.|+++.|++
T Consensus 123 ~~-----d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p~-~~g~di~i~S~s 196 (366)
T PRK08247 123 TA-----SLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRPL-EEGADIVIHSAT 196 (366)
T ss_pred CC-----CHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCch-hcCCcEEEeecc
Confidence 64 899999999999999999999999999999999999999999999999999755432222 357899999999
Q ss_pred CcCCCCc---ceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|++++.+ .|+++.+ +++.+.+.......+ ...+......+..+++ . +...
T Consensus 197 K~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g---------------------~~~s~~~a~l~~~~l~---t--l~~r 250 (366)
T PRK08247 197 KYLGGHNDVLAGLVVAKGQELCERLAYYQNAAG---------------------AVLSPFDSWLLIRGMK---T--LALR 250 (366)
T ss_pred eeccCCCceeeeEEecChHHHHHHHHHHHHhcC---------------------CCCChHHHHHHHhccC---c--HHHH
Confidence 9877543 6888776 556555442221100 0122211111222222 2 2333
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+.+..+.++|++++++
T Consensus 251 ~~~~~~~a~~l~~~L~~~p~v 271 (366)
T PRK08247 251 MRQHEENAKAIAAFLNEQPGV 271 (366)
T ss_pred HHHHHHHHHHHHHHHHhCCCe
Confidence 445688888888888887764
No 207
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.88 E-value=8.1e-22 Score=188.35 Aligned_cols=272 Identities=13% Similarity=-0.001 Sum_probs=175.7
Q ss_pred CCeEEeccCCC--CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCC-C----CCCcEE--EeC
Q 017640 66 KKLVYLDNAAT--SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA-S----DSGEIV--FTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~--~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~----~~~~v~--~t~ 136 (368)
++.++|..+.+ ...+..+.+++.+++........ ...+.......++|+++++++.. . .+++|+ .|.
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~----~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~ 104 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNL----DKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQAL 104 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccccC----CCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeecc
Confidence 46688888864 23444556666666543221110 11122234555888888887632 1 234777 488
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcc---cCceE
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLS---RKTKL 211 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~---~~~~~ 211 (368)
|+++|+..++..+. ..+++||+|++.+|.|+. +...++..|++++.+++. +++.+|++.+++++. +++++
T Consensus 105 G~~~al~~~~~~l~-~~~~~Gd~Vlv~~P~y~~----~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~ 179 (404)
T PTZ00376 105 SGTGALRLGFEFLK-RFLPAGTTVYVSNPTWPN----HVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVV 179 (404)
T ss_pred CcchHHHHHHHHHH-HhcCCCCEEEEcCCCchh----HHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEE
Confidence 99999988875321 027899999999998877 455667779999999984 347889999999885 34678
Q ss_pred EEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc--------cc-cCCC-CCccEEEecCcCcCCCCc--
Q 017640 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--------VV-DVQG-LDADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~--------~~-~~~~-~~~d~~~~s~~K~~g~~G-- 276 (368)
++++++|||||.+++ +++|+++|++||++||+|++|..-.. ++ .+.. .+..+++.|+||.|+.+|
T Consensus 180 ~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlR 259 (404)
T PTZ00376 180 LLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGER 259 (404)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccc
Confidence 889999999999999 67888899999999999999862211 01 1111 125689999999999888
Q ss_pred ceEEE---EcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---HHh--CHHHHHHH
Q 017640 277 IGFLF---GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL---STI--GMQKIHAY 348 (368)
Q Consensus 277 ~G~l~---~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~---~~~--g~~~i~~~ 348 (368)
+||++ .++++++.+......- .+...++.+.....++..+++.- ... -++.++++
T Consensus 260 vG~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 322 (404)
T PTZ00376 260 IGALHIVCANKEEAANVLSQLKLI-----------------IRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGR 322 (404)
T ss_pred cceEEEEeCCHHHHHHHHHHHHHH-----------------HhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 99984 4665443322110000 00011133444445555555321 111 14455667
Q ss_pred HHHHHHHHHHHHHhh
Q 017640 349 EVKWIICSIIVIQER 363 (368)
Q Consensus 349 ~~~l~~~l~~~l~~~ 363 (368)
.++..+.+.+.|.+.
T Consensus 323 ~~~~r~~l~~~L~~~ 337 (404)
T PTZ00376 323 IQNMRQLLYDELKAL 337 (404)
T ss_pred HHHHHHHHHHHHHhc
Confidence 778888888888775
No 208
>PLN02271 serine hydroxymethyltransferase
Probab=99.88 E-value=9.2e-21 Score=180.41 Aligned_cols=288 Identities=15% Similarity=0.061 Sum_probs=200.8
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhc--cCCCCcchhhHH-HHHHHHHHHHHHHHHcCCCCCC---cEEEeCCHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNS--NVHRGIHFLSAK-ATDEYELARKKVAAFINASDSG---EIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~r~~la~~~~~~~~~---~v~~t~g~t~a 141 (368)
.+.|=... ..+++.+++++...+..-+. .|.. .++.|.. ..+...-..++..++||++.++ +|.. -+++.|
T Consensus 150 ~l~LIASE-N~~S~av~~algS~ltnkYaEG~pG~-Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp-~SGs~A 226 (586)
T PLN02271 150 GIELIASE-NFVCRAVMEALGSHLTNKYSEGMPGA-RYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQP-YSCTSA 226 (586)
T ss_pred Ceeecccc-ccCCHHHHHHhcCcccccCCCCCCCC-cCCCCChhHHHHHHHHHHHHHHHhCCcccccccceee-ccHHHH
Confidence 34554333 45788888888776665322 2221 2233333 3445555788889999987521 4433 377789
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHH-----HHHHHcCCEEEEEe--CC-CCCCCCHHHHHH-hcccCceEE
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQ-----LVAQKTGANLKFLN--LN-DDESPDLDKLKE-MLSRKTKLV 212 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~-----~~~~~~g~~v~~v~--~~-~~~~~d~~~l~~-~l~~~~~~v 212 (368)
+..++.++ ++|||+|+..+.+|.++..... ..+...|..+..++ ++ +++.+|.+++++ +...+|++|
T Consensus 227 N~aV~~AL----l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLI 302 (586)
T PLN02271 227 NFAVYTGL----LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKIL 302 (586)
T ss_pred HHHHHHHh----cCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEE
Confidence 99999998 9999999999998888764321 22344566555555 54 568999999998 667799999
Q ss_pred EEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCC---CCCccEEEecCcCc-CCCCcceEEEEcccccc
Q 017640 213 VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ---GLDADFLVASSHKM-CGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~---~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~ 288 (368)
++.+..++ ..+|+++|.++|+++|+++++|++|..|.+..+.. ..++|++++|.||+ .||.| |+++++++...
T Consensus 303 I~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~ 379 (586)
T PLN02271 303 ICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDYCDIVTSTTHKSLRGPRG-GIIFYRKGPKL 379 (586)
T ss_pred EECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcCCcEEEeCCcccCCCCCc-eEEEecccccc
Confidence 99998888 77899999999999999999999999998855431 23699999999995 58888 88888887665
Q ss_pred cCCCcccCCcceeecccCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPP-SRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..++...+|+...............- -.++.|+.+. .+++++.++++......+...+++.++++.+.+.|.+. |++
T Consensus 380 ~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~-~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~ 457 (586)
T PLN02271 380 RKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNN-HIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCR 457 (586)
T ss_pred cccCCccccccccccHHHHHHhhcccCCccccChhHH-HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 55555555443211110000000000 1445555544 49999999998877666788888999999999999876 544
No 209
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.88 E-value=2.9e-21 Score=161.70 Aligned_cols=162 Identities=26% Similarity=0.301 Sum_probs=135.6
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC
Q 017640 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD 193 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~ 193 (368)
+++++.++++++.+. +++++++|+|+|+.+++.++ .+++++|++.++.|++... ..++..|++++.++.+.+
T Consensus 3 ~~~~~~l~~~~~~~~-~~~~~~~~~t~a~~~~~~~~----~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~ 74 (170)
T cd01494 3 EELEEKLARLLQPGN-DKAVFVPSGTGANEAALLAL----LGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDA 74 (170)
T ss_pred HHHHHHHHHHcCCCC-CcEEEeCCcHHHHHHHHHHh----CCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCC
Confidence 479999999997444 38899999999999999998 6679999999999999763 345677999999998765
Q ss_pred CCCCH--HHHHHhc-ccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc---cCCCCCccEEEec
Q 017640 194 ESPDL--DKLKEML-SRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQGLDADFLVAS 267 (368)
Q Consensus 194 ~~~d~--~~l~~~l-~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~---~~~~~~~d~~~~s 267 (368)
+..+. +.+++.. .++++++++++++|++|...|+++|.++|+++|+++++|++|+.+.... +....++|+++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s 154 (170)
T cd01494 75 GYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFS 154 (170)
T ss_pred CccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEE
Confidence 43333 2554433 4688999999999999999999999999999999999999999777654 4555679999999
Q ss_pred CcCcCCCCcceEEEEc
Q 017640 268 SHKMCGPTGIGFLFGK 283 (368)
Q Consensus 268 ~~K~~g~~G~G~l~~~ 283 (368)
+||++|++|+|++++|
T Consensus 155 ~~K~~~~~~~G~l~~~ 170 (170)
T cd01494 155 LHKNLGGEGGGVVIVK 170 (170)
T ss_pred cccccCCCceEEEEeC
Confidence 9999888899999875
No 210
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.88 E-value=3.8e-21 Score=183.80 Aligned_cols=163 Identities=19% Similarity=0.300 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.+++++|.+ ..++++|+++|+..++.++ +++||+|++.++.|++++..+...++..|+++++++
T Consensus 56 ~p~~~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~~l----~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~ 128 (418)
T TIGR01326 56 NPTTDVLEQRIAALEGGV---AALAVASGQAAITYAILNL----AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD 128 (418)
T ss_pred ChhHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH----hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence 344568999999999974 5688999999999999888 889999999999999888778888888999999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++++++++++++++|++++++||+|.+.|+++|.++|+++|+++|+|++++.+... .....+.|+++.|++
T Consensus 129 ~~-----d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~~-~~l~~g~Divv~S~s 202 (418)
T TIGR01326 129 PD-----DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYLC-RPIDHGADIVVHSAT 202 (418)
T ss_pred CC-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhcC-CchhcCCeEEEECcc
Confidence 64 899999999999999999999999999999999999999999999999999876432 222457999999999
Q ss_pred CcCCCCc--ceEEEEccc
Q 017640 270 KMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 270 K~~g~~G--~G~l~~~~~ 285 (368)
|++|++| +|+++++++
T Consensus 203 K~l~g~G~~lGg~v~~~~ 220 (418)
T TIGR01326 203 KYIGGHGTAIGGVIVDGG 220 (418)
T ss_pred ccccCCccceEEEEEecc
Confidence 9999887 788777553
No 211
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.88 E-value=4.8e-21 Score=185.22 Aligned_cols=204 Identities=14% Similarity=0.100 Sum_probs=143.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-----CC--CC--CCcEEEe
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-----NA--SD--SGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-----~~--~~--~~~v~~t 135 (368)
.+++.+..+.++ .+|+.+.++. +.+... .++. .....++|+++++.+ +. .+ +++|++|
T Consensus 100 ~~~i~l~~g~p~~~~~~~v~e~~-~~~~~~-~Y~~----------~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT 167 (527)
T PRK09275 100 RDAVSYVRDQLGFDADEFVYELV-DGIIGD-NYPV----------PDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAV 167 (527)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHH-HHHhcC-CCCC----------CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEe
Confidence 457888888888 5566777744 444321 1111 111224555555522 11 12 2489999
Q ss_pred CCHHHHHHHHHHHccC-CCCCCCCEEEEcCCCCcccHHHHHHHHHHc--CCEEEEEeCCC--CCCCCHHHHHHhcccCce
Q 017640 136 KNATEAINLVAYSWGL-SNLKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLND--DESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~-~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~--g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~ 210 (368)
+|+++|+..++.++.. ..+++||+|++.+|.|+. +...++.. +.+++.++.++ ++.+|+++|+++++++++
T Consensus 168 ~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~----Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tk 243 (527)
T PRK09275 168 EGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTP----YLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIK 243 (527)
T ss_pred CCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHH----HHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCC
Confidence 9999999999886210 017999999999997766 44444444 45566666542 478999999999999999
Q ss_pred EEEEcccccccccccC---HHHHHHHHHh--cCCEEEEecCCcCCccc-ccC-C-CCCccEEEecCcCcCCCCc--ceEE
Q 017640 211 LVVIHHISNMLASILP---IEEIVHWSHD--VGAKVLVDACQSVPHMV-VDV-Q-GLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~--~g~~li~D~a~~~~~~~-~~~-~-~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
+|++++|+||||.+++ +++|+++|++ ++++||+|++|..-... ..+ . ..+..+++.|+||.||.+| +||+
T Consensus 244 ai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i 323 (527)
T PRK09275 244 ALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKYFGATGWRLGVI 323 (527)
T ss_pred EEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhhccCcHhHHhhh
Confidence 9999999999999999 7788888964 59999999999732111 111 1 1246789999999999999 9999
Q ss_pred EEccc
Q 017640 281 FGKSD 285 (368)
Q Consensus 281 ~~~~~ 285 (368)
+++++
T Consensus 324 ~~~~~ 328 (527)
T PRK09275 324 ALHED 328 (527)
T ss_pred hcCch
Confidence 99887
No 212
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.88 E-value=9e-21 Score=176.28 Aligned_cols=202 Identities=14% Similarity=0.098 Sum_probs=149.7
Q ss_pred HHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCC
Q 017640 115 LARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE 194 (368)
Q Consensus 115 ~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~ 194 (368)
.+|++++++++.+ +|++|+|+++++.++.. +.+||+|++.+|+|+. +...++..|++++.++.+
T Consensus 53 ~Lr~~ia~~~~~~---~I~it~Gs~~al~~~~~------~~~gd~v~v~~P~y~~----~~~~~~~~g~~~~~v~~~--- 116 (330)
T PRK05664 53 GLEAAARAYYGAP---QLLPVAGSQAAIQALPR------LRAPGRVGVLSPCYAE----HAHAWRRAGHQVRELDEA--- 116 (330)
T ss_pred HHHHHHHHHhCCC---CEEECcCHHHHHHHHHH------ccCCCEEEEcCCChHH----HHHHHHHcCCeEEEechh---
Confidence 7899999999863 89999999999998852 5799999999996666 566677789999999863
Q ss_pred CCCHHHHHHhcccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc--c-ccCCCCCccEEEecC
Q 017640 195 SPDLDKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--V-VDVQGLDADFLVASS 268 (368)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~--~-~~~~~~~~d~~~~s~ 268 (368)
++++.+ ++++++++++|+||||.+++ +++|+++|+++|++||+|++|..... + ..+...+..++++|+
T Consensus 117 -----~~~~~~-~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~Sf 190 (330)
T PRK05664 117 -----EVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSF 190 (330)
T ss_pred -----hHhhhh-cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeec
Confidence 355555 36788999999999999999 55666777899999999999963321 1 122222356899999
Q ss_pred cCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 269 HKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 269 ~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
||.||.+| +||+++++++++.+...... .+.+.....++..+++.... .+.++
T Consensus 191 SK~~gl~GlRiG~~v~~~~l~~~~~~~~~~-----------------------~~~~~~~~~~~~~~L~~~~~--~~~~~ 245 (330)
T PRK05664 191 GKFFGLAGARLGFVLAEPALLRALAELLGP-----------------------WTVSGPTRWLAQAALADTPW--QRRQR 245 (330)
T ss_pred cccccCCCcceEEEEeCHHHHHHHHHhcCC-----------------------CCCCHHHHHHHHHHHhChHH--HHHHH
Confidence 99999888 99999999888776643211 12334444555555543221 35567
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++..+..+++.+.|++.
T Consensus 246 ~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 246 ERLLAASQRLAALLRRH 262 (330)
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 77777788888888764
No 213
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.88 E-value=1.7e-20 Score=177.96 Aligned_cols=248 Identities=14% Similarity=0.187 Sum_probs=170.6
Q ss_pred CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC
Q 017640 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG 157 (368)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g 157 (368)
...+.+++++.+.++++..+...+... ++......++++++|+++|.+ +.+++++|.+ ++..++.++ +++|
T Consensus 12 ~~~~~~~~~~~~a~~~~g~~~~~sr~~--yg~~~~~~~LE~~lA~~~g~e--~al~~~sG~~-a~~~~i~~l----~~~G 82 (392)
T PLN03227 12 SSSPTLRQTALESLSHYGCGSCGPRGF--YGTIDAHLELEQCMAEFLGTE--SAILYSDGAS-TTSSTVAAF----AKRG 82 (392)
T ss_pred CCCHHHHHHHHHHHHHhCCCCcccccc--cCChHHHHHHHHHHHHHhCCC--cEEEecCcHH-HHHHHHHHh----CCCC
Confidence 356789999999988865443322222 333457889999999999987 3677777765 555777777 8999
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-----------cCceEEEEcccccccccccC
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-----------RKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-----------~~~~~v~~~~~~n~tG~~~~ 226 (368)
|.|++.++.|.+....+ ...+.+++.++.. +. -|++.+.+.+. +++++|+++.++|++|.+.|
T Consensus 83 D~Vl~~~~~h~s~~~~~----~l~~~~~~~~~~~-d~-~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~ 156 (392)
T PLN03227 83 DLLVVDRGVNEALLVGV----SLSRANVRWFRHN-DM-KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP 156 (392)
T ss_pred CEEEEeccccHHHHHHH----HHcCCeEEEeCCC-CH-HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC
Confidence 99999999999876543 3346788877765 11 12333333332 35789999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCcCCccc---------ccCC-CCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccC
Q 017640 227 IEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQ-GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~-~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g 296 (368)
+++|.++|++||+++++|++|++|..- +.+. ..+.|+++.|++|.+|+.| |++++++++++.++....+
T Consensus 157 l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g-g~v~~~~~~~~~~~~~~~~ 235 (392)
T PLN03227 157 LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG-GMTVGSEEVVDHQRLSGSG 235 (392)
T ss_pred HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC-cEEecCHHHHHHHHHhCcC
Confidence 999999999999999999999865431 1111 2356999999999988775 7888888877655422111
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
..|. +..+.....+...++....+ .+.+.++..++.+++.+.|++
T Consensus 236 ------------------~~~~-~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 236 ------------------YCFS-ASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred ------------------cccc-CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHh
Confidence 1222 22223233333344443332 356677888888888888874
No 214
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.88 E-value=3e-21 Score=181.27 Aligned_cols=171 Identities=13% Similarity=0.180 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE
Q 017640 108 KATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (368)
Q Consensus 108 ~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 187 (368)
...+..+.+++.++.+-+.+ ..++++++++|+..++.++ +++||+|+++++.|++....+...+++.|+++..
T Consensus 61 ~gnPt~~~Le~~la~le~~~---~~v~~sSG~aAi~~~l~al----l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~ 133 (395)
T PRK05967 61 RGTPTTDALCKAIDALEGSA---GTILVPSGLAAVTVPFLGF----LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEY 133 (395)
T ss_pred CCChHHHHHHHHHHHHhCCC---CEEEECcHHHHHHHHHHHh----cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEE
Confidence 34566668999999887754 3356666789999999988 8999999999999999876666778889999999
Q ss_pred EeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEec
Q 017640 188 LNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (368)
Q Consensus 188 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s 267 (368)
++.. +.+.+++++++++++|++++|+||++.+.|+++|+++|+++|+++++|++++.+.. ...-+++.|+++.|
T Consensus 134 vd~~-----~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~p~~-~~pl~~GaDivv~S 207 (395)
T PRK05967 134 YDPE-----IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWATPLY-FRPLDFGVDISIHA 207 (395)
T ss_pred eCCC-----CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccCcee-cChhHcCCCEEEEe
Confidence 8654 45789999999999999999999999999999999999999999999999987643 23335789999999
Q ss_pred CcCcCCCCc---ceEEEEcccccccCC
Q 017640 268 SHKMCGPTG---IGFLFGKSDLLSAMP 291 (368)
Q Consensus 268 ~~K~~g~~G---~G~l~~~~~li~~l~ 291 (368)
.+|++++.| +|+++.++++.+.++
T Consensus 208 ~tKy~~Gh~d~~~G~v~~~~~~~~~l~ 234 (395)
T PRK05967 208 ATKYPSGHSDILLGTVSANEKCWPQLL 234 (395)
T ss_pred cccccCCCCCeeEEEEEcCHHHHHHHH
Confidence 999887766 787777766544443
No 215
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.87 E-value=3.6e-21 Score=181.40 Aligned_cols=217 Identities=18% Similarity=0.175 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+...++++.++++.|.+. . +++++++.++..++ .+ +++||+|+++++.|.+.+..+...++..|+++++++
T Consensus 49 ~p~~~~Le~~lA~l~g~~~--~-~~~~sG~aai~~~~-~~----l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~ 120 (377)
T PRK07671 49 NPTRAALEELIAVLEGGHA--G-FAFGSGMAAITAVM-ML----FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVD 120 (377)
T ss_pred ChHHHHHHHHHHHHhCCCc--e-EEeCCHHHHHHHHH-HH----hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEEC
Confidence 4556789999999999863 4 44555567887665 35 789999999999999887777777777899999997
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++++++++++++++|++++|+||||.+.++++|.++|+++|+++++|++++.+..... -..+.|+++.|++
T Consensus 121 ~~-----d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~~~~~~p-~~~g~Divv~S~s 194 (377)
T PRK07671 121 TS-----NLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMTPYWQSP-ISLGADIVLHSAT 194 (377)
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCccccCCh-hhhCCeEEEecCc
Confidence 54 89999999999999999999999999999999999999999999999999986543211 2457899999999
Q ss_pred CcCCCCc---ceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|++|+++ .|++++++ ++++.++..... ..++.+..... ..++-++. +...
T Consensus 195 K~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~---------------------~g~~~~~~~a~---l~~~~l~t--l~~R 248 (377)
T PRK07671 195 KYLGGHSDVVAGLVVVNSPELAEDLHFVQNS---------------------TGGILGPQDSW---LLLRGLKT--LGIR 248 (377)
T ss_pred ccccCCccceeEEEEeCcHHHHHHHHHHHHh---------------------hcCCCCHHHHH---HHHcCcCh--HHHH
Confidence 9887543 67777654 565555422211 01122221111 11221222 3334
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+.+..+.++|++++++
T Consensus 249 ~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 249 MEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred HHHHHHHHHHHHHHHHcCCCe
Confidence 556667888888888887653
No 216
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.87 E-value=1.7e-20 Score=177.82 Aligned_cols=260 Identities=16% Similarity=0.150 Sum_probs=175.1
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
..+...+++.+.+.... ... .....++|+.+++++|.+ ..++++|+|+|+..++.++ .+++||
T Consensus 8 ~~~~~~~~v~~~~~~~~-------~~~----g~~~~~le~~la~~~g~~---~~v~~~sgt~al~~~l~al---~~~~Gd 70 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF-------LTQ----GPTVPAFEEALAEYVGAK---YAVAFNSATSALHIACLAL---GVGPGD 70 (380)
T ss_pred CCHHHHHHHHHHHhcCC-------ccC----ChhHHHHHHHHHHHHCCC---eEEEEcCHHHHHHHHHHHc---CCCCCC
Confidence 45556777776665321 111 233568999999999986 3456668899999999987 478999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcc----cCceEEEEcccccccccccCHHHHHHH
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLS----RKTKLVVIHHISNMLASILPIEEIVHW 233 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~l~~i~~l 233 (368)
+|++++++|.+.. ..++..|++++++++++ ++.+|+++++++++ +++++|++++ ++|...++++|.++
T Consensus 71 ~Viv~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~~l 143 (380)
T TIGR03588 71 RVWTTPITFVATA----NCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIAAL 143 (380)
T ss_pred EEEeCCcchHHHH----HHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHHHH
Confidence 9999999887754 34456799999999964 57889999999998 7889888655 58999999999999
Q ss_pred HHhcCCEEEEecCCcCCcccccCCCCCc----cEEEecCc--CcCCCCcceEEEEc-ccccccCCCcccCCcceeecccC
Q 017640 234 SHDVGAKVLVDACQSVPHMVVDVQGLDA----DFLVASSH--KMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 234 ~~~~g~~li~D~a~~~~~~~~~~~~~~~----d~~~~s~~--K~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
|++||+++|+|++|++|.. ++....+. |+.++|+| |+++.+..|+++.+ +++.+++++...++.......
T Consensus 144 ~~~~~~~lI~D~a~a~g~~-~~~~~~g~~~~~d~~~~S~~~~K~~~~~~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~-- 220 (380)
T TIGR03588 144 AKKHGLKIIEDASHALGAE-YGGKPVGNCRYADATVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLL-- 220 (380)
T ss_pred HHHcCCEEEEECCCcccCc-cCCEeCCCccccceEEEecCCCCcccccCceEEEECCHHHHHHHHHHHHCCCCCCccc--
Confidence 9999999999999999875 44444455 99999988 77764345666654 566666654433222111000
Q ss_pred CCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 307 HSTFADPPSRFEAGTPAI---GEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~---~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..........++.++... ..-+....++..++. ++.+.++.+++++++.+.|.++++++
T Consensus 221 ~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~--l~~~~~~r~~~~~~~~~~L~~~~~~~ 282 (380)
T TIGR03588 221 FEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKK--LDRFVAKRREIAARYDRLLKDLPYFT 282 (380)
T ss_pred ccccccCcceeeeeccccccCccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 000011111222111110 011111222222333 67888999999999999998876643
No 217
>PRK05968 hypothetical protein; Provisional
Probab=99.87 E-value=4.3e-21 Score=181.75 Aligned_cols=219 Identities=13% Similarity=0.144 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.+++++|.+. . +++++++.|+..++.++ +++||+|++..+.|.+++..+...++..|+++++++
T Consensus 62 ~p~~~~le~~lA~l~g~~~--a-v~~~sG~~Ai~~al~al----~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd 134 (389)
T PRK05968 62 NPTVRAFEEMLAKLEGAED--A-RGFASGMAAISSTVLSF----VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVD 134 (389)
T ss_pred ChhHHHHHHHHHHHhCCCc--E-EEECCHHHHHHHHHHHH----hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeC
Confidence 4557789999999999863 4 44566678999999887 899999999999999988878778888899999997
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++++++++ +++++|++++++|+++.+.++++|.++|++||+++++|++++.+...... ..+.|+++.|++
T Consensus 135 ~~-----d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~~p~-~~g~Divv~S~t 207 (389)
T PRK05968 135 GR-----DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQRPI-TLGVDLVIHSAS 207 (389)
T ss_pred CC-----CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhccCch-hcCCcEEEeecc
Confidence 65 889999988 67899999999999999999999999999999999999999876532122 357899999999
Q ss_pred CcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 270 KMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
|.++++| +|+++.+++++++++.....+ + .+..+...... .+..++. +....
T Consensus 208 K~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~-------------------~-g~~~~~~~A~~---~l~~L~t--l~~r~ 262 (389)
T PRK05968 208 KYLGGHSDTVAGVVAGSKEHIARINAEAYPY-------------------L-GAKLSPFEAWL---LLRGLRT--LPLRM 262 (389)
T ss_pred ccccCCCCeEEEEEEECHHHHHHHHHHHHHh-------------------C-CCCCChHHHHH---HHcccCc--HHHHH
Confidence 9776543 688888888877665321100 0 01222211122 2333333 34444
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 017640 347 AYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~t 367 (368)
++..+.+..+.++|+++++++
T Consensus 263 ~~~~~~a~~la~~L~~~p~v~ 283 (389)
T PRK05968 263 KAHEASALEIARRLKAHPVVE 283 (389)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 555666888888888887653
No 218
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.87 E-value=4.3e-21 Score=180.92 Aligned_cols=168 Identities=20% Similarity=0.229 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+....+++.++++.|.+. . +++++++.|+.+++. + +++||+|+++++.|++.+..+...++..|+++++++
T Consensus 49 ~p~~~~Le~~la~l~g~~~--a-l~~~SG~~Al~~~l~-~----l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd 120 (380)
T PRK06176 49 NPTRFALEELIADLEGGVK--G-FAFASGLAGIHAVFS-L----FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIID 120 (380)
T ss_pred ChhHHHHHHHHHHHhCCCC--E-EEECCHHHHHHHHHH-H----cCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcC
Confidence 4556689999999999763 3 555666779987664 5 689999999999999888778778888899999887
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++++++++++++++|++++++||+|.+.|+++|.++|++||+++++|++++.+...... .++.|++++|++
T Consensus 121 ~~-----d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~~~~~~p~-~~gaDivv~S~t 194 (380)
T PRK06176 121 TS-----DLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYYQNPL-LLGADIVVHSGT 194 (380)
T ss_pred CC-----CHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccccccCCcc-ccCCCEEEecCc
Confidence 64 899999999999999999999999999999999999999999999999999866542222 468999999999
Q ss_pred CcCCCCc---ceEEEEcc-cccccCC
Q 017640 270 KMCGPTG---IGFLFGKS-DLLSAMP 291 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~-~li~~l~ 291 (368)
|+++++| .|+++.++ ++.+.++
T Consensus 195 K~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 195 KYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred eeccCCccceeeEEEecHHHHHHHHH
Confidence 9887554 67777754 4444443
No 219
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.87 E-value=9.5e-21 Score=182.94 Aligned_cols=209 Identities=15% Similarity=0.080 Sum_probs=144.9
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHH-HHHHHHcCC--CCCC--cEEEeCCHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELAR-KKVAAFINA--SDSG--EIVFTKNATE 140 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~la~~~~~--~~~~--~v~~t~g~t~ 140 (368)
++++.+..+..+..++..++++.+.+... .++. ..+..+..+++. +.+.+.++. .+++ +|++|+|+++
T Consensus 94 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~-~Y~~------p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 94 RDIISYVIDQLGFDPDAFLYEMCDGIIGD-NYPV------PDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHhhcC-CCCC------CCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 45788888888855556666665554221 1110 111122222322 333333332 2333 7999999999
Q ss_pred HHHHHHHHcc-CCCCCCCCEEEEcCCCCcccHHHHHHHHHH--cCCEEEEEeCCC--C-----CCCCHHHHHHhcccCce
Q 017640 141 AINLVAYSWG-LSNLKSGDEVILTVAEHHSAIVPWQLVAQK--TGANLKFLNLND--D-----ESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 141 a~~~~~~~~~-~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~--~g~~v~~v~~~~--~-----~~~d~~~l~~~l~~~~~ 210 (368)
|+..++.++. ...+++||+|++.+|.|+.. ...++. .|++++.++.++ + +.+|.++++++++++++
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y----~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k 242 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPY----LEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK 242 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHH----HHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCc
Confidence 9999988721 00178999999999977773 333333 377888888753 2 78899999999888999
Q ss_pred EEEEcccccccccccC---HHHHHHHHHhc--CCEEEEecCCcCCccc-ccC-C-CCCccEEEecCcCcCCCCc--ceEE
Q 017640 211 LVVIHHISNMLASILP---IEEIVHWSHDV--GAKVLVDACQSVPHMV-VDV-Q-GLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~~--g~~li~D~a~~~~~~~-~~~-~-~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
+|++++|+||||.+++ +++|+++|++| +++||+|++|+.-... .++ . ..+..+++.|+||.||.+| +||+
T Consensus 243 ai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i 322 (521)
T TIGR03801 243 ALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSKYFGATGWRLGTI 322 (521)
T ss_pred EEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchhhccCchhhhhhh
Confidence 9999999999999999 77888889986 8999999999732111 111 1 1235789999999999999 9999
Q ss_pred EEccc
Q 017640 281 FGKSD 285 (368)
Q Consensus 281 ~~~~~ 285 (368)
+++++
T Consensus 323 ~~~~~ 327 (521)
T TIGR03801 323 ALHKD 327 (521)
T ss_pred hcCch
Confidence 99875
No 220
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.87 E-value=6.2e-21 Score=183.16 Aligned_cols=217 Identities=12% Similarity=0.133 Sum_probs=140.4
Q ss_pred CCeEEeccCCCCCCc---HHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCC
Q 017640 66 KKLVYLDNAATSQKP---IAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~---~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g 137 (368)
++.+.|..+.....+ +.+.+++.+.+........ ...+.......++|+++++++ |.+ ++++|++|+|
T Consensus 30 ~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~G 105 (416)
T PRK09440 30 PGAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEA----LGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNG 105 (416)
T ss_pred CCceeccCCCCCccCCHHHHHHHHHHHHhcCcccccc----cccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccC
Confidence 456888876654222 3445555544432100000 001111122336777777766 433 2359999999
Q ss_pred HHHHHHHHHHHccCCCC-----CCCCEEEE-cCCCCcccHHHHHHHHHHcCCEEEEEeCCC---CCCCCHHHHHHhcccC
Q 017640 138 ATEAINLVAYSWGLSNL-----KSGDEVIL-TVAEHHSAIVPWQLVAQKTGANLKFLNLND---DESPDLDKLKEMLSRK 208 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~-----~~gd~vl~-~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~---~~~~d~~~l~~~l~~~ 208 (368)
+++++.+++.++ + .+||.|++ .+|+|+.............+..+..++++. ++.+|++.|+ +.++
T Consensus 106 a~~al~~~~~~l----~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~ 179 (416)
T PRK09440 106 SQSAFFYLFNLF----AGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDED 179 (416)
T ss_pred hHHHHHHHHHHH----hccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCC
Confidence 999999999988 5 36899999 799888754321110001112222333333 2568999987 4567
Q ss_pred ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcccc---cCC--CCCccEEEecCcCcCCCCc--ce
Q 017640 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQ--GLDADFLVASSHKMCGPTG--IG 278 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~~---~~~--~~~~d~~~~s~~K~~g~~G--~G 278 (368)
++++++++|+||||.+++ +++|+++|++|+++||+|++|+.....+ +.. ..+..++++|+||. +.+| +|
T Consensus 180 ~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~pGlRiG 258 (416)
T PRK09440 180 TGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL-GLPGVRCG 258 (416)
T ss_pred ceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc-CCCcceEE
Confidence 899999999999999999 6788889999999999999997322111 111 12456889999996 8788 99
Q ss_pred EEEEcccccccCCCc
Q 017640 279 FLFGKSDLLSAMPPF 293 (368)
Q Consensus 279 ~l~~~~~li~~l~~~ 293 (368)
|+++++++++.+...
T Consensus 259 ~~i~~~~l~~~~~~~ 273 (416)
T PRK09440 259 IVIADEEIIEALSNM 273 (416)
T ss_pred EEeCCHHHHHHHHHH
Confidence 999999888776543
No 221
>PLN02509 cystathionine beta-lyase
Probab=99.87 E-value=7.4e-21 Score=182.06 Aligned_cols=216 Identities=19% Similarity=0.162 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+..+++++.++++.|.+ ..++++|+++++..++ .+ +++||+|+++++.|.++...+.......|++++.++.
T Consensus 133 pt~~aLE~~lA~leg~e---~ai~~~SG~aAi~~il-~l----l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~ 204 (464)
T PLN02509 133 PTRDALESLLAKLDKAD---RAFCFTSGMAALSAVT-HL----IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_pred HHHHHHHHHHHHHhCCC---EEEEeCcHHHHHHHHH-HH----hCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCC
Confidence 45778999999999865 4566677788886655 45 7899999999999988776666666788999998875
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 270 (368)
. |++++++++.+++++|++++++||+|.+.|+++|+++|++||+++++|++++.+...... ..+.|++++|++|
T Consensus 205 ~-----d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~pl-~~gaDivv~S~tK 278 (464)
T PLN02509 205 T-----NLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRPL-ELGADIVMHSATK 278 (464)
T ss_pred C-----CHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCChh-hcCCcEEEecCcc
Confidence 4 789999999999999999999999999999999999999999999999999877653222 4579999999999
Q ss_pred cCCCC-c--ceEEEEcccc-cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 271 MCGPT-G--IGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 271 ~~g~~-G--~G~l~~~~~l-i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+++.+ + .|+++++++. .+.++...... .+..+... +...+.-++. ++...
T Consensus 279 ~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~---------------------g~~l~p~~---A~l~lr~L~t--L~~R~ 332 (464)
T PLN02509 279 FIAGHSDVMAGVLAVKGEKLAKEVYFLQNSE---------------------GSGLAPFD---CWLCLRGIKT--MALRI 332 (464)
T ss_pred cccCCCccceeEEEeccHHHHHHHHHHHHhc---------------------CCCcCHHH---HHHHHhhhhh--HHHHH
Confidence 77654 3 7888876543 22222111100 01112211 2233333333 35556
Q ss_pred HHHHHHHHHHHHHHHhhcCC
Q 017640 347 AYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~ 366 (368)
++..+.+.++.++|++++.+
T Consensus 333 ~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 333 EKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred HHHHHHHHHHHHHHhcCCCc
Confidence 77888889999999888764
No 222
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=1.3e-20 Score=179.80 Aligned_cols=163 Identities=19% Similarity=0.297 Sum_probs=137.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.+++.++++.|.+ ..+++++++.|+..++.++ +++||+|++....|.+++..+...+++.|+++++++
T Consensus 68 ~p~~~~Le~~lA~l~g~~---~av~~sSG~aAi~~al~al----l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd 140 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV---AALLLASGQAAETFAILNL----AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE 140 (436)
T ss_pred CchHHHHHHHHHHHhCCC---eEEEEccHHHHHHHHHHHH----hCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC
Confidence 345668999999999986 4577778889999999888 899999999999998887766666677788888885
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
+. .|++++++++++++++|++++++||+|.+.|+++|.++||++|+++++|++++.+.....+ .++.|+++.|++
T Consensus 141 -d~---~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl-~~GaDivv~S~t 215 (436)
T PRK07812 141 -DP---DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIATPYLIRPL-EHGADIVVHSAT 215 (436)
T ss_pred -CC---CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCEEEEecc
Confidence 22 2899999999999999999999999999999999999999999999999999877653223 568999999999
Q ss_pred CcCCCCc--ceEEEEcc
Q 017640 270 KMCGPTG--IGFLFGKS 284 (368)
Q Consensus 270 K~~g~~G--~G~l~~~~ 284 (368)
|++|+.| +|.+++..
T Consensus 216 K~lgg~G~~i~G~vv~~ 232 (436)
T PRK07812 216 KYLGGHGTAIAGVIVDG 232 (436)
T ss_pred cccCCCCCeEEEEEEcC
Confidence 9988887 55555543
No 223
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=5.1e-21 Score=182.61 Aligned_cols=160 Identities=20% Similarity=0.281 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.++++.|.+ ..++++++++|+..++.++ +++||+|++..+.|++++..+....+..|+++.+++
T Consensus 57 ~pt~~~Le~~lA~l~g~~---~~l~~ssG~~Ai~~al~al----~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 57 NPTNDVLEQRVAALEGGV---GALAVASGMAAITYAIQTI----AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred CchHHHHHHHHHHHhCCC---ceeEehhHHHHHHHHHHHH----hCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 445668999999999965 4567788889999999988 889999999999999877666555455677887777
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.. |++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+... ..-..+.|+++.|++
T Consensus 130 ~~-----d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~~~~~-~p~~~gaDivv~S~t 203 (425)
T PRK06084 130 HD-----DIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVATPVLC-RPFEHGADIVVHSLT 203 (425)
T ss_pred CC-----CHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcccccC-ChhhcCCCEEEECch
Confidence 54 899999999999999999999999999999999999999999999999999976542 222468999999999
Q ss_pred CcCCCCc--ceEEEE
Q 017640 270 KMCGPTG--IGFLFG 282 (368)
Q Consensus 270 K~~g~~G--~G~l~~ 282 (368)
|++|++| +|.+++
T Consensus 204 K~l~G~g~~~gG~v~ 218 (425)
T PRK06084 204 KYIGGHGTSIGGIVV 218 (425)
T ss_pred hcccccccceeEEEE
Confidence 9988766 344444
No 224
>PRK05939 hypothetical protein; Provisional
Probab=99.87 E-value=9.7e-21 Score=179.29 Aligned_cols=162 Identities=15% Similarity=0.229 Sum_probs=136.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+.+++.++++.|... . +.+++++.|+..++.++ +++||+|+++++.|+++...+.. .+..|++++++
T Consensus 45 g~p~~~~lE~~la~leg~~~--~-v~~ssG~~Ai~~~l~al----l~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v 116 (397)
T PRK05939 45 GTPTTAALEAKITKMEGGVG--T-VCFATGMAAIAAVFLTL----LRAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTMV 116 (397)
T ss_pred CCHHHHHHHHHHHHHhCCCe--E-EEeCCHHHHHHHHHHHH----cCCCCEEEECCCccccHHHHHHH-HHhcCCEEEEE
Confidence 34667789999999999873 4 44555589999999888 89999999999999887665544 56789999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.. |++++++++++++++|++++++||||.+.|+++|+++|+++|+++++|++++.+.. ++....+.|+++.|+
T Consensus 117 ~~~-----d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~~~~-~~~~~~gaDivv~S~ 190 (397)
T PRK05939 117 DAT-----DVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTSPWL-FRPKDVGASLVINSL 190 (397)
T ss_pred CCC-----CHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCcccccc-cCccccCCEEEEecC
Confidence 875 89999999999999999999999999999999999999999999999999987643 455556899999999
Q ss_pred cCcCCCCc--ceEEEEcc
Q 017640 269 HKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 269 ~K~~g~~G--~G~l~~~~ 284 (368)
+|++++.| +|.+++.+
T Consensus 191 sK~~~g~g~~igg~v~~~ 208 (397)
T PRK05939 191 SKYIAGHGNALGGAVTDT 208 (397)
T ss_pred eecccCCCCeEEEEEecC
Confidence 99988777 56665543
No 225
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=8.2e-21 Score=181.62 Aligned_cols=159 Identities=21% Similarity=0.286 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+....+++.++++.|.+ ..++++++++|+.+++.++ +++||+|+++.+.|.+....+...++..|++++.++.
T Consensus 63 p~~~~le~~lA~l~g~~---~al~~~SG~~Ai~~al~al----l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 63 PTNAVLEERVAALEGGT---AALAVASGHAAQFLVFHTL----LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred ccHHHHHHHHHHHhCCC---cEEEEcCHHHHHHHHHHHH----hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 44568999999999986 4578888899999999988 8999999999999999887777777888999999986
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 270 (368)
. |++++++++++++++|++++++||+|.+.|+++|.++|++||+++++|++++.+... ..-..++|+++.|++|
T Consensus 136 ~-----d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~~~~~-~pl~~gaDivv~S~tK 209 (427)
T PRK05994 136 D-----DPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLASPYLI-RPIEHGADIVVHSLTK 209 (427)
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccccccC-CccccCCcEEEEcCcc
Confidence 5 899999999999999999999999999999999999999999999999999977543 2334689999999999
Q ss_pred cCCCCc--ceEEEE
Q 017640 271 MCGPTG--IGFLFG 282 (368)
Q Consensus 271 ~~g~~G--~G~l~~ 282 (368)
++|++| +|.+++
T Consensus 210 ~lgg~~~~~gG~v~ 223 (427)
T PRK05994 210 FLGGHGNSMGGIIV 223 (427)
T ss_pred ccCCCCCcEEEEEE
Confidence 888765 555554
No 226
>PLN02880 tyrosine decarboxylase
Probab=99.87 E-value=8e-21 Score=183.98 Aligned_cols=287 Identities=15% Similarity=0.115 Sum_probs=182.9
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC------CcEEEeCCHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS------GEIVFTKNATEAIN 143 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~a~~ 143 (368)
|+++-..++.++.+...+.... + |.....+..++...++.+.+.+++++++|.+.. ...++|+|+|+++.
T Consensus 85 f~~~~~~~~~~~~~lad~l~~~--~--n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl 160 (490)
T PLN02880 85 YFAYYPSNSSVAGFLGEMLSAG--L--NIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVL 160 (490)
T ss_pred eeEeccCCCcHHHHHHHHHHHh--h--ccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHH
Confidence 5555444444555444442221 2 222233445667788899999999999999853 24789999999999
Q ss_pred HHHHHccCCCCC-------CCCEEEEcCCCCcccHHHHHHHHHHcCC---EEEEEeCCC--CCCCCHHHHHHhccc----
Q 017640 144 LVAYSWGLSNLK-------SGDEVILTVAEHHSAIVPWQLVAQKTGA---NLKFLNLND--DESPDLDKLKEMLSR---- 207 (368)
Q Consensus 144 ~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~---- 207 (368)
.++.+.+....+ +.-.|++++..|+| +.+.+...|. .++.||.++ ++.+|++.|+++|.+
T Consensus 161 ~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~S----v~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~ 236 (490)
T PLN02880 161 VVLLAARDRVLRKVGKNALEKLVVYASDQTHSA----LQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSS 236 (490)
T ss_pred HHHHHHHHHHHHHhcccccCCeEEEEcCCchHH----HHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHC
Confidence 888765321111 12256678888888 4556666687 488999875 578999999999964
Q ss_pred --CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-----cCCC-CCccEEEecCcCc-CCCCcce
Q 017640 208 --KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-----DVQG-LDADFLVASSHKM-CGPTGIG 278 (368)
Q Consensus 208 --~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-----~~~~-~~~d~~~~s~~K~-~g~~G~G 278 (368)
.+-+|+.+..++.||.+.|+++|+++|++||+++++|+||+.+.... .+.. .++|.++.++||+ +.|.|+|
T Consensus 237 g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g 316 (490)
T PLN02880 237 GLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCS 316 (490)
T ss_pred CCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEE
Confidence 35788999999999999999999999999999999999999765422 1232 3689999999995 5688999
Q ss_pred EEEEcccccccCCCcccCCcceeecccC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 017640 279 FLFGKSDLLSAMPPFLGGGEMISDVFLD-HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSI 357 (368)
Q Consensus 279 ~l~~~~~li~~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~ 357 (368)
++++++.. ...++...++......... ...+.......+.|... ..+.+..+++.+-..|+.++.++..++++++.
T Consensus 317 ~llvr~~~-~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~--~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~ 393 (490)
T PLN02880 317 LLWVKDRN-ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRF--RSLKLWMVLRLYGVENLQSYIRNHIKLAKEFE 393 (490)
T ss_pred EEEEeCHH-HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcc--cHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 99998632 1111111111110000000 00000001112222221 11233344444433344444444459999999
Q ss_pred HHHHhhcCCC
Q 017640 358 IVIQERHNTT 367 (368)
Q Consensus 358 ~~l~~~~g~t 367 (368)
+.|.+.++++
T Consensus 394 ~~l~~~~~~e 403 (490)
T PLN02880 394 QLVAQDSRFE 403 (490)
T ss_pred HHHhcCCCEE
Confidence 9999888765
No 227
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.87 E-value=4e-20 Score=174.27 Aligned_cols=195 Identities=16% Similarity=0.148 Sum_probs=148.1
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
..+...+++.+.+.... .. + ..+..+++++.+++++|.+ ++++|+|+|+|+.+++.++ .+++||
T Consensus 9 ~~~~e~~a~~~~~~~~~-------~~-~--~g~~~~~~e~~la~~~g~~---~~v~~~sgt~aL~~~l~al---~~~pGd 72 (376)
T TIGR02379 9 VTGQELEYIAEAISEGK-------LS-G--DGPFSRRCETWLENRTGTK---KALLTPSCTAALEMAALLL---DIQPGD 72 (376)
T ss_pred CCHHHHHHHHHHHHcCC-------cc-C--CcHHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHc---CCCCcC
Confidence 45666777777665411 10 0 1345668889999998875 7899999999999999887 478999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|++++++|.++...+ ...|+++++++++++ +.+|++++++++++++++|+. ++++|...++++|.++|++|
T Consensus 73 ~Viv~~~t~~~~~~~~----~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Iip---~~~~G~~~d~~~I~~la~~~ 145 (376)
T TIGR02379 73 EVIMPSYTFVSTANAF----VLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIVP---VHYAGVACDMDTIMALANKH 145 (376)
T ss_pred EEEECCCCcHHHHHHH----HHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEEE---eCCCCCccCHHHHHHHHHHC
Confidence 9999999988865444 455999999999866 689999999999999999874 45799999999999999999
Q ss_pred CCEEEEecCCcCCcccccCCCCC--ccEEEecCcC--cCCCC-cceEEEEc-ccccccCCCcccCC
Q 017640 238 GAKVLVDACQSVPHMVVDVQGLD--ADFLVASSHK--MCGPT-GIGFLFGK-SDLLSAMPPFLGGG 297 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~~~~~~~--~d~~~~s~~K--~~g~~-G~G~l~~~-~~li~~l~~~~~g~ 297 (368)
|++||+|++|+.+.. .+-...+ .|+.++|+++ .+.+. .+|+++++ +++.+++++....|
T Consensus 146 ~i~vIeDaa~~~g~~-~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g 210 (376)
T TIGR02379 146 QLFVIEDAAQGVMST-YKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKG 210 (376)
T ss_pred CCEEEEECccccCCc-cCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhC
Confidence 999999999998764 3322223 3677777765 34432 24776665 67888877665433
No 228
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.87 E-value=1.1e-20 Score=180.25 Aligned_cols=167 Identities=19% Similarity=0.249 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEE
Q 017640 107 AKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLK 186 (368)
Q Consensus 107 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 186 (368)
....+..+.+++.++++.|.+ +.|++++| ++|+.+++.++ +++||+|++++..|.++...+...+++.|++++
T Consensus 65 r~~~pt~~~le~~la~l~g~~--~~v~fsSG-~~Ai~~al~~l----l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (437)
T PRK05613 65 RLTNPTVEALENRIASLEGGV--HAVAFASG-QAAETAAILNL----AGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVT 137 (437)
T ss_pred CccChHHHHHHHHHHHHhCCC--eEEEeCCH-HHHHHHHHHHh----cCCCCEEEECCCccHHHHHHHHHHHHhcCeEEE
Confidence 334566778999999999985 25555555 57888888877 799999999999999987667677788899999
Q ss_pred EEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEe
Q 017640 187 FLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVA 266 (368)
Q Consensus 187 ~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~ 266 (368)
+++ +++ |++.+++++++++++|+++++.||+|.+.|+++|.++|+++|+++++|++++.|.. .+...+++|++++
T Consensus 138 ~vd-~~~---d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~g~~-~~p~~~GaDivv~ 212 (437)
T PRK05613 138 FVE-NPD---DPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIATAAL-VRPLELGADVVVA 212 (437)
T ss_pred EEC-CCC---CHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCccccc-cChHHhCCCEEEe
Confidence 997 322 78999999999999999999999999999999999999999999999999988765 3333568999999
Q ss_pred cCcCcCCCCc---ceEEEEccc
Q 017640 267 SSHKMCGPTG---IGFLFGKSD 285 (368)
Q Consensus 267 s~~K~~g~~G---~G~l~~~~~ 285 (368)
|+||++++.| .|+++.+.+
T Consensus 213 S~~K~l~G~gd~~gG~vv~~~~ 234 (437)
T PRK05613 213 SLTKFYTGNGSGLGGVLIDGGK 234 (437)
T ss_pred eccceecCCCcceeEEEEecCc
Confidence 9999998876 455554444
No 229
>PRK07049 methionine gamma-lyase; Validated
Probab=99.87 E-value=9.1e-21 Score=181.16 Aligned_cols=218 Identities=12% Similarity=0.120 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
.....+++.+|++.|.+ ++++++|+++|+..++.++ +++||.|++.+|.|..+...+...++..|++++.++.
T Consensus 83 Pt~~~Le~~lA~leg~~---~~iv~~sG~~Ai~~~l~al----~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~ 155 (427)
T PRK07049 83 PNSEIVEDRLAVYEGAE---SAALFSSGMSAIATTLLAF----VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD 155 (427)
T ss_pred cCHHHHHHHHHHHhCCC---cEEEEccHHHHHHHHHHHH----hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC
Confidence 34458999999999865 6788888889999999988 8999999999999998776656666778998766652
Q ss_pred CCCCCCCHHHHHHhcc-----cCceEEEEcccccccccccCHHHHHHHHHh------cCCEEEEecCCcCCcccccCCCC
Q 017640 191 NDDESPDLDKLKEMLS-----RKTKLVVIHHISNMLASILPIEEIVHWSHD------VGAKVLVDACQSVPHMVVDVQGL 259 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~------~g~~li~D~a~~~~~~~~~~~~~ 259 (368)
. .|++.+++++. +++++|++++|+||||.++|+++|.+++++ +++++++|+++..+...-.+ ..
T Consensus 156 ~----~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl-~~ 230 (427)
T PRK07049 156 G----LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL-EH 230 (427)
T ss_pred C----CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc-cc
Confidence 2 36677776663 478999999999999999999999999987 89999999998644321112 34
Q ss_pred CccEEEecCcCcCC-CCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 260 DADFLVASSHKMCG-PTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 260 ~~d~~~~s~~K~~g-~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
+.|+++.|++|.+| .+| +|+++.++++++.++...... .++.+......+..+++
T Consensus 231 g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~---------------------g~~ls~~~a~l~~r~L~- 288 (427)
T PRK07049 231 GADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAI---------------------GTQLDPHSCWMLGRSLE- 288 (427)
T ss_pred CCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhc---------------------CCCCCHHHHHHHHcCCC-
Confidence 68999999999887 466 899998888877665432211 11333333333333333
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 337 LSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 337 ~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
. +....++..+.+..+.++|++++++
T Consensus 289 --t--l~~R~~~~~~~a~~la~~L~~~p~V 314 (427)
T PRK07049 289 --T--LVLRMERANRNARAVAEFLRDHPKV 314 (427)
T ss_pred --h--HHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3 2333455577888888888888764
No 230
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.87 E-value=1.4e-20 Score=160.22 Aligned_cols=271 Identities=18% Similarity=0.199 Sum_probs=199.0
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhh-----HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLS-----AKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
.+.|++|.--.+ ..+++.++++.++-+.+.. ..++. .-..+-+.++.+.+++++|++ .+-+|+|+.
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E~gDGYSv-----CD~C~~Grldei~kPpI~~F~~dlaeFlg~D---~~R~t~GAR 86 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLEWGDGYSV-----CDFCLEGRLDEITKPPIKDFLEDLAEFLGMD---EVRVTAGAR 86 (382)
T ss_pred cCccccChhhccCcCCHHHHHHHHHhcCCcch-----hhhhccCccccccCCcHHHHHHHHHHHhCCc---eeeecccch
Confidence 355777765544 7788888888777553321 11221 112234667778899999996 778999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhccc-------Cce
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR-------KTK 210 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~-------~~~ 210 (368)
++=..++.++ +++||.|++....|++++.+ +++.|.++..||.. +++.++++.+.+.|++ .+.
T Consensus 87 e~KfavMhal----~~~gd~vV~D~~aHYttyvA----AEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~ 158 (382)
T COG1103 87 EAKFAVMHAL----CKEGDWVVVDSLAHYTTYVA----AERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPA 158 (382)
T ss_pred hhHHHHHHHh----ccCCCEEEEcCcchHHHHHH----HHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCce
Confidence 9999999999 99999999999999987654 56679999999965 5688899888777742 368
Q ss_pred EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCc-ceEEEEccccccc
Q 017640 211 LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSA 289 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G-~G~l~~~~~li~~ 289 (368)
+.+++++...-|...+.+.++++|+++|+++++.++|..|.+|++....++||+++|.||..+..| +|++.++++.-+.
T Consensus 159 lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~ 238 (382)
T COG1103 159 LALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEI 238 (382)
T ss_pred EEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecCccchhccCCeeEEeehhHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999776655 9999999987654
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+-...........+ .-+.+ |.--+.++.+.+++-+..+ .-+-++...+.++|+.+++.++-|+
T Consensus 239 V~r~Sg~~~~~KEv-----------ellGC-T~rGapivTlmASfP~V~e--RVkrWdeEv~kaR~fv~elEkigg~ 301 (382)
T COG1103 239 VLRRSGRAFPKKEV-----------ELLGC-TVRGAPIVTLMASFPHVVE--RVKRWDEEVEKARWFVAELEKIGGV 301 (382)
T ss_pred HHhhccccccccee-----------eeecc-cccCchHHHHHhcCHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 32111000000000 01111 2223345556666665554 2233455667888999999888654
No 231
>PLN02590 probable tyrosine decarboxylase
Probab=99.87 E-value=5.7e-20 Score=178.22 Aligned_cols=296 Identities=15% Similarity=0.085 Sum_probs=201.0
Q ss_pred CCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC---
Q 017640 53 PDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS--- 129 (368)
Q Consensus 53 ~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--- 129 (368)
...+......+ |+ |+++-..+..+..+...+.... + |.....+..++...++...+.+++++++|.+..
T Consensus 120 ~i~p~~~~~~h--P~--f~a~~~~~~~~~~~lgd~l~sa--~--n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~ 191 (539)
T PLN02590 120 KIMPGITHWQS--PS--YFAYYASSTSVAGFLGEMLNAG--L--SVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLS 191 (539)
T ss_pred HHhccCCcCCC--CC--eeEeccCCCcHHHHHHHHHHHh--c--ccccCCcccCchhHHHHHHHHHHHHHHhCCCccccc
Confidence 34555544433 33 5555444444554444332221 2 223345566777889999999999999999853
Q ss_pred ---CcEEEeCCHHHHHHHHHHHccCCCC-------CCCCEEEEcCCCCcccHHHHHHHHHHcCC---EEEEEeCCC--CC
Q 017640 130 ---GEIVFTKNATEAINLVAYSWGLSNL-------KSGDEVILTVAEHHSAIVPWQLVAQKTGA---NLKFLNLND--DE 194 (368)
Q Consensus 130 ---~~v~~t~g~t~a~~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~ 194 (368)
...+||+|+|+|+..++.+.+.... .+.-.|++++..|+| +.+.+...|+ +++.||++. ++
T Consensus 192 ~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~S----v~KAa~ilGlg~~~vr~Vp~d~~~~~ 267 (539)
T PLN02590 192 TGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSS----FRKACLIGGIHEENIRLLKTDSSTNY 267 (539)
T ss_pred CCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHH----HHHHHHHcCCCcccEEEEeCCCCCCC
Confidence 3578999999999988876532111 122256667877887 4566666677 589999883 57
Q ss_pred CCCHHHHHHhccc------CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-C-----CCCCcc
Q 017640 195 SPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-V-----QGLDAD 262 (368)
Q Consensus 195 ~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-~-----~~~~~d 262 (368)
.+|+++|+++|.+ .+-+|+.+..++.||.+.|+++|+++|++||+|++||+|++....... . .-...|
T Consensus 268 ~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~AD 347 (539)
T PLN02590 268 GMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENAD 347 (539)
T ss_pred cCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCC
Confidence 9999999999965 357899999999999999999999999999999999999996553221 1 112479
Q ss_pred EEEecCcCc-CCCCcceEEEEccc--ccccCC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 263 FLVASSHKM-CGPTGIGFLFGKSD--LLSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 263 ~~~~s~~K~-~g~~G~G~l~~~~~--li~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
.++.++||+ +.|.++|++++++. +.+.+. +++...........+ ......+.+.+ ...+.+..+++.
T Consensus 348 Sit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d-----~~d~~i~lsRr--~raLklW~~lr~ 420 (539)
T PLN02590 348 SFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVN-----YKDWQISLSRR--FRSLKLWMVLRL 420 (539)
T ss_pred EEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCC-----ccccCCCCCCc--hHHHHHHHHHHH
Confidence 999999995 55888999999974 222221 111100000000001 11122233222 235677788888
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 337 LSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 337 ~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+-..|+.++.++..++++++.+.|++.++++
T Consensus 421 ~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fe 451 (539)
T PLN02590 421 YGSENLRNFIRDHVNLAKHFEDYVAQDPSFE 451 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 8888999999999999999999999987765
No 232
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=2.5e-20 Score=176.83 Aligned_cols=265 Identities=15% Similarity=0.139 Sum_probs=189.2
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHH-HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAK-ATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
..+.|=.+. ..+++.+.+++...+..-+ +.|.. .++.+.. ..+......++..++||++.. +|-.- |++.|+.
T Consensus 50 ~~l~LiasE-N~~s~~v~~a~~s~l~nkyaeg~pg~-ryy~g~~~~d~ie~l~~~ra~~lf~a~~a-nvqp~-Sg~~An~ 125 (493)
T PRK13580 50 SSLKLIASE-NYSSLAVQLAMGNLLTDKYAEGTPGH-RFYAGCQNVDTVEWEAAEHAKELFGAEHA-YVQPH-SGADANL 125 (493)
T ss_pred cCceEeccc-ccCCHHHHHHhcccccccCcCCCCCc-cccCCCchHHHHHHHHHHHHHHHhCCCcc-cccCC-CcHHHHH
Confidence 445555444 4578888888876666422 22322 2233333 445566688899999999854 55444 4567999
Q ss_pred HHHHHccCCCCCC-------------------------------CCEEEEcCCCCcccHHHHHHHHHHcC--CEEEEEeC
Q 017640 144 LVAYSWGLSNLKS-------------------------------GDEVILTVAEHHSAIVPWQLVAQKTG--ANLKFLNL 190 (368)
Q Consensus 144 ~~~~~~~~~~~~~-------------------------------gd~vl~~~~~~~s~~~~~~~~~~~~g--~~v~~v~~ 190 (368)
.++.++ ++| ||+|+..+..+.+....- ......| .+++..++
T Consensus 126 ~v~~al----l~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg-~~~n~~~~~~~~~~y~v 200 (493)
T PRK13580 126 VAFWAI----LAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHG-FRPNISGKMFHQRSYGV 200 (493)
T ss_pred HHHHHH----hcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecC-cccchhhheeeeEeccc
Confidence 999988 554 799998876664432111 0111112 34555666
Q ss_pred C-CCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCC------CCCccE
Q 017640 191 N-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQ------GLDADF 263 (368)
Q Consensus 191 ~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~------~~~~d~ 263 (368)
+ +++.+|.+++++.+.++++.|++++.+|. |...|+++|.++|+++|+++++|++|++|.+..+.. ..++|+
T Consensus 201 d~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~ 279 (493)
T PRK13580 201 DPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADI 279 (493)
T ss_pred CcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcE
Confidence 6 45899999999999999999999999998 557899999999999999999999999988764431 136899
Q ss_pred EEecCcCcC-CCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 264 LVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 264 ~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
+++|+||++ ||.| |++++++++++.+.... .+-.|++..+.+++...++..+.+...
T Consensus 280 vtgT~hKaL~GP~G-G~I~~~~~l~~~L~~a~---------------------P~i~gg~l~p~iAA~avAl~e~~~~ef 337 (493)
T PRK13580 280 VTTTTHKTLRGPRG-GLVLAKKEYADAVDKGC---------------------PLVLGGPLPHVMAAKAVALAEARTPEF 337 (493)
T ss_pred EEeCChhhccCCCe-EEEEecHHHHHHHhhCC---------------------CcccCCCccHHHHHHHHHHHHHhCccH
Confidence 999999965 7886 99999998887763111 122346666688888888887765555
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 017640 343 QKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+..++++.++++++.+.|.+.
T Consensus 338 ~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 338 QKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 678899999999999999875
No 233
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=7.5e-20 Score=173.41 Aligned_cols=260 Identities=16% Similarity=0.113 Sum_probs=188.0
Q ss_pred CeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 67 KLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 67 ~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+++|..+.+- ...+.++++..+.++++......+ ..-.+.....+++++.||+++|.+ ..++.+++..|+..
T Consensus 103 ~~l~FsSndYLGL~~~p~v~~a~~~ai~~yG~g~~gS--rl~~G~~~~h~~LE~~LA~f~g~e---~all~sSGy~AN~~ 177 (476)
T PLN02955 103 KLLLFSGNDYLGLSSHPTISNAAANAAKEYGMGPKGS--ALICGYTTYHRLLESSLADLKKKE---DCLVCPTGFAANMA 177 (476)
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCCc--CccccChHHHHHHHHHHHHHHCCC---cEEEECChHHHHHH
Confidence 45666665543 468889999999999875443322 222334667789999999999987 44666667788888
Q ss_pred HHHHccC----------CCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceE
Q 017640 145 VAYSWGL----------SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKL 211 (368)
Q Consensus 145 ~~~~~~~----------~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~ 211 (368)
++.++.- ....+++.|++....|.|.++..+...+..+++++.++.+ |+++|+++++. +.++
T Consensus 178 ~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~~~~~~~ 252 (476)
T PLN02955 178 AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSCKMKRKV 252 (476)
T ss_pred HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhCCCCceE
Confidence 8877510 0024667888999999998776554322225788888887 99999988853 4578
Q ss_pred EEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc---------cCCCCCccEEEecCcCcCCCCcceEEEE
Q 017640 212 VVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---------DVQGLDADFLVASSHKMCGPTGIGFLFG 282 (368)
Q Consensus 212 v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~---------~~~~~~~d~~~~s~~K~~g~~G~G~l~~ 282 (368)
|+++...++.|.+.|+++|.++|++||+++++|++|+.|..-. .+. .+.|++++|++|.+|..| |++++
T Consensus 253 Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~-~di~ii~~TLsKA~G~~G-Gfi~g 330 (476)
T PLN02955 253 VVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCE-ADVDLCVGTLSKAAGCHG-GFIAC 330 (476)
T ss_pred EEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCC-CCCcEEEEeCccchhccC-ceeec
Confidence 9999999999999999999999999999999999999765421 122 368899999999999886 99999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 359 (368)
++++++.++..-.+ ..| ++..+....++..++++.+... +..++++.++.+++.+.
T Consensus 331 s~~~~~~l~~~~~~------------------~if-Stalpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 331 SKKWKQLIQSRGRS------------------FIF-STAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKAL 386 (476)
T ss_pred HHHHHHHHHHhCCC------------------Cee-cccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHh
Confidence 99887766633211 122 2245555666777888877652 44667777777777763
No 234
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=4.7e-20 Score=176.20 Aligned_cols=265 Identities=15% Similarity=0.170 Sum_probs=174.9
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHH-HHhhccCCCCcchhhHHHHHHHHHHHH----HHHHHcCCCCCCcEEEeCCHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYY-EAYNSNVHRGIHFLSAKATDEYELARK----KVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~----~la~~~~~~~~~~v~~t~g~t~a 141 (368)
+.++|-.+. ..++|.+++++...+ ..+......+....|. +..+++++ .+++++|.+. .+++++|++.|
T Consensus 29 ~~~~l~~se-n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~---~~~~~lE~~~~~~la~l~g~~~--alv~~~SG~~A 102 (416)
T PRK13034 29 DHLELIASE-NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGC---EFVDEVEALAIERAKQLFGCDY--ANVQPHSGSQA 102 (416)
T ss_pred cCeeecccc-cCCCHHHHHHhcchhhcCCCCCCCCCcccCCC---hHHHHHHHHHHHHHHHHhCCCc--eEEecCCcHHH
Confidence 334444433 446999999998885 5553322222222232 33444554 9999999872 44667888999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHH-HHHHHHHHcCCEE--EEEeCC-CCCCCCHHHHHHhccc-CceEEEEcc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIV-PWQLVAQKTGANL--KFLNLN-DDESPDLDKLKEMLSR-KTKLVVIHH 216 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~-~~~~~~~~~g~~v--~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~ 216 (368)
+..++.++ +++||+|++....|.+... .... ...+... ..++++ .++.+|++++++.+.. ++++|+++.
T Consensus 103 ~~~~l~al----~~~GD~Vl~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~ 176 (416)
T PRK13034 103 NGAVYLAL----LKPGDTILGMSLSHGGHLTHGAKV--SLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGF 176 (416)
T ss_pred HHHHHHHh----cCCCCEEEEcCccceeeeecCCcc--eeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECC
Confidence 99999998 8999999999999987421 1110 0012222 344443 2467899999998854 678888765
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccC---CCCCccEEEecCcCcC-CCCcceEEEEccccc-ccCC
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDV---QGLDADFLVASSHKMC-GPTGIGFLFGKSDLL-SAMP 291 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~---~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li-~~l~ 291 (368)
. .+|...|+++|.++|++||+++++|++|++|...... ...++|++++|+||++ |+.| |+++.+++.+ +.++
T Consensus 177 ~--~~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~ 253 (416)
T PRK13034 177 S--AYPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKIN 253 (416)
T ss_pred C--ccccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHH
Confidence 4 3678889999999999999999999999988763322 1125899999999987 5665 7776665433 3344
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+....+ . .++++.+.++++..++......+....++++.++++++.+.|.+. |++
T Consensus 254 ~~~~~~-------------------~-~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~ 308 (416)
T PRK13034 254 SAVFPG-------------------L-QGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYD 308 (416)
T ss_pred hhcCCc-------------------c-cCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 322110 0 123445555555555554443344567899999999999999876 543
No 235
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.86 E-value=1.4e-20 Score=176.24 Aligned_cols=215 Identities=16% Similarity=0.118 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+...+++++++++.|.+ ++++++|+++|+.+++. + +++||+|+++.+.|.+....+.......+.++.+
T Consensus 53 ~p~~~~le~~lA~leg~~---~~v~~~sG~aAi~~~l~-~----l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~-- 122 (364)
T PRK07269 53 NPTRAKLEETLAAIESAD---YALATSSGMSAIVLAFS-V----FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTY-- 122 (364)
T ss_pred CccHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHH-H----hCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEe--
Confidence 445668999999999865 78999999999999884 5 6899999999999987764444433322322222
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
..|++++++++++++++|++++|+||||.+.++++|+++|+++|+++++|++++.+...-. -..+.|+++.|++
T Consensus 123 -----~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~~~~~~p-l~~gaDivv~S~t 196 (364)
T PRK07269 123 -----ANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYSPIYQRP-IELGADIVLHSAT 196 (364)
T ss_pred -----cCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccCCc-hhhCCcEEEecCc
Confidence 2389999999999999999999999999999999999999999999999999876543222 2458999999999
Q ss_pred CcCCCCc---ceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG---IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G---~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|+++++| .|+++++ +++.++++.... ......+.. .+..++.-++. ++..
T Consensus 197 K~l~g~~d~~gG~v~~~~~~l~~~~~~~~~---------------------~~G~~~s~~---~a~l~~~~L~t--L~~r 250 (364)
T PRK07269 197 KYLSGHNDVLAGVVVTNDLELYEKLFYNLN---------------------TTGAVLSPF---DSYLLMRGLKT--LSLR 250 (364)
T ss_pred eeccCCCcccceEEEeCcHHHHHHHHHHHH---------------------HhCCCCCHH---HHHHHHcCCCc--HHHH
Confidence 9887655 6888875 455554442111 000111221 12222222222 5666
Q ss_pred HHHHHHHHHHHHHHHHhhcCC
Q 017640 346 HAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+++..+.++|++.++.
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v 271 (364)
T PRK07269 251 MERSTANAQEVVAFLKKSPAV 271 (364)
T ss_pred HHHHHHHHHHHHHHHHhCCCc
Confidence 677788888889999887753
No 236
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.86 E-value=9.2e-20 Score=170.98 Aligned_cols=283 Identities=19% Similarity=0.177 Sum_probs=190.3
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC------CcEEEeCCHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS------GEIVFTKNATEAIN 143 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~a~~ 143 (368)
|+++-..++.+..+...+.... ++.|. .....++...++..++.+++++++|.+.. ...++|+|+|+++.
T Consensus 42 ~~~~~~~~~~~~~i~~~~l~~~--~n~n~--~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl 117 (373)
T PF00282_consen 42 FFGFVPGGPSPASILADLLASA--LNQNG--FTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANL 117 (373)
T ss_dssp BESSSHT--CHHHHHHHHHHHH--HT-BT--TSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHH
T ss_pred HhhhccCCccHHHHHHHHHHhh--hcccc--cccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHH
Confidence 5555555555655555443322 22332 34455677888999999999999999821 25799999999999
Q ss_pred HHHHHccCCCC--------C-CCC-EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---C--
Q 017640 144 LVAYSWGLSNL--------K-SGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---K-- 208 (368)
Q Consensus 144 ~~~~~~~~~~~--------~-~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~-- 208 (368)
.++.+.+.... . .++ .|++++..|++ +.+.+...|..++.||+++++.+|+++|+++|.+ +
T Consensus 118 ~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S----~~Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~ 193 (373)
T PF00282_consen 118 YALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYS----IEKAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGK 193 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-TH----HHHHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhhhhhhcccccccccccccccccccH----HHHhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccc
Confidence 98876532111 0 122 57777888888 5667778899999999999999999999998864 2
Q ss_pred -ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc------ccCCCCCccEEEecCcCcCC-CCcceEE
Q 017640 209 -TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV------VDVQGLDADFLVASSHKMCG-PTGIGFL 280 (368)
Q Consensus 209 -~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~------~~~~~~~~d~~~~s~~K~~g-~~G~G~l 280 (368)
+-+|+.+..++.+|.+.|+++|.++|+++++++++|++++....- +...-...|.++.++||+++ |.++|++
T Consensus 194 ~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~ 273 (373)
T PF00282_consen 194 TPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVL 273 (373)
T ss_dssp EEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEE
T ss_pred cceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeE
Confidence 447889999999999999999999999999999999999853331 11122358999999999655 7789999
Q ss_pred EEcccc-ccc-CC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 281 FGKSDL-LSA-MP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 281 ~~~~~l-i~~-l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
++|++. +.. +. ++........ ...+......+ .++. -...+.+..+++.+-..|+.++.++..+++++
T Consensus 274 l~r~~~~l~~~~~~~~~Yl~~~~~~~-----~~~~~~~~~tl-~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~ 346 (373)
T PF00282_consen 274 LVRDKSDLRDAFSINADYLGNDDRES-----DESYDYGDYTL-QGSR-RFRALKLWATLKSLGREGYRERIRRCIELARY 346 (373)
T ss_dssp EESSGGGHHGGGEEEETCTT-S-SSS------GGGCEEEGSS-SSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeecccchHHHhccChhhhccccccc-----ccccccccccc-cccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 998863 221 10 1111000000 00000001112 2344 45567778888888888999999999999999
Q ss_pred HHHHHHhhcCCC
Q 017640 356 SIIVIQERHNTT 367 (368)
Q Consensus 356 l~~~l~~~~g~t 367 (368)
+.++|++.++++
T Consensus 347 l~~~l~~~~~~e 358 (373)
T PF00282_consen 347 LADRLRKDPRFE 358 (373)
T ss_dssp HHHHHHTSTTEE
T ss_pred HHHHHHhCCCEE
Confidence 999999987653
No 237
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.86 E-value=7e-20 Score=170.87 Aligned_cols=245 Identities=15% Similarity=0.153 Sum_probs=186.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEeCCHHHHHHHHHHHccCCCC-CCCCEEEEcCCCCcccHHHHH-HHHH
Q 017640 103 HFLSAKATDEYELARKKVAAFINASDSGEI-VFTKNATEAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQ-LVAQ 179 (368)
Q Consensus 103 ~~~~~~~~~~~~~~r~~la~~~~~~~~~~v-~~t~g~t~a~~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~-~~~~ 179 (368)
++.+..+.+.++++++.+.++++.+.++++ +++.|+|.+++.++..+ + ++|+.+++.. .++ .-|. .+++
T Consensus 31 ~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl----~~~~g~~vLv~g--~FG--~r~~~eia~ 102 (374)
T TIGR01365 31 SHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSM----LGCRGVDVLAWE--SFG--KGWVTDVTK 102 (374)
T ss_pred CcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHc----CCCCCCeEEEEC--HHH--HHHHHHHHH
Confidence 355677899999999999999998644445 56899999999999998 6 5888888753 333 3456 8889
Q ss_pred HcCC-EEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCC
Q 017640 180 KTGA-NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQG 258 (368)
Q Consensus 180 ~~g~-~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~ 258 (368)
..|+ ++..+..+.+..+|+++++. . +.|+++|..+.||+..|++++...+ +++++++|++.++|..+++++.
T Consensus 103 ~~g~~~v~~l~~~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d~ 175 (374)
T TIGR01365 103 QLKLPDVRVLEAEYGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYHK 175 (374)
T ss_pred hcCCCCcEEEcCCCCCCCCHHHcCC--C---CCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChhH
Confidence 9999 58888877777889999873 1 2367999999999999997665322 5899999999999999998884
Q ss_pred CCccEEEecCcCcC-CCCcceEEEEcccccccCCCcccCCcceeecccCCC---CCC-CCCCCCCCCCCCHHHHHHHHHH
Q 017640 259 LDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHS---TFA-DPPSRFEAGTPAIGEAIGLGAA 333 (368)
Q Consensus 259 ~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~---~~~-~~~~~~~~gt~~~~~~~a~~~a 333 (368)
.|++++|.+|.+ +|+|+++++++++.+++.......+.. .. ..+.. .+. .........||++..++++..+
T Consensus 176 --iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~-~~-~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~ 251 (374)
T TIGR01365 176 --LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPL-PK-IFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDA 251 (374)
T ss_pred --CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCC-hh-hhccccccchhhhhhcCCCCCChHHHHHHHHHHH
Confidence 999999999965 588899999999998775532110000 00 01110 000 0011234558999999999999
Q ss_pred HHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 334 IDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 334 l~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
++++.++ |++.+.+|.+++++.+++.+++...+
T Consensus 252 l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l 285 (374)
T TIGR01365 252 LKWAESIGGLKPLIARADDNLAVLEAFVAKNNWI 285 (374)
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 9988886 89999999999999999999986324
No 238
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.86 E-value=7.3e-20 Score=173.71 Aligned_cols=163 Identities=19% Similarity=0.252 Sum_probs=138.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.+++.++++.|.. ..+.++|++.|+.+++.++ +++||+|+++.+.|.++...+.......|++++++.
T Consensus 60 nPtv~~lE~~la~leg~~---~av~~~SG~aAi~~al~al----l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd 132 (432)
T PRK06702 60 NPTLAAFEQKLAELEGGV---GAVATASGQAAIMLAVLNI----CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFN 132 (432)
T ss_pred CcHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHh----cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEEC
Confidence 345678999999999986 4578999999999999988 899999999999999888777776788899999996
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
. .+|+++++++|+++|++|++++++||++.+.|+++|+++|++||+++++|++++.+.. ...-..+.|+++.|++
T Consensus 133 ~----~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~tP~~-~~pl~~GADIvv~S~T 207 (432)
T PRK06702 133 P----NLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-CQAFEHGANIIVHSTT 207 (432)
T ss_pred C----CCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCchhh-CChhhcCCCEEEEccc
Confidence 4 3589999999999999999999999999999999999999999999999999975433 2223568999999999
Q ss_pred CcCCCCc---ceEEEEcc
Q 017640 270 KMCGPTG---IGFLFGKS 284 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~ 284 (368)
|++|+.+ .|+++...
T Consensus 208 Ky~~Ghsd~l~G~v~~~~ 225 (432)
T PRK06702 208 KYIDGHASSLGGIVIDGG 225 (432)
T ss_pred cccCCCcceeceEEEeCC
Confidence 9887665 55555443
No 239
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.85 E-value=3.5e-19 Score=180.00 Aligned_cols=280 Identities=14% Similarity=0.101 Sum_probs=193.5
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhc-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
.++..+++....+...+.+.-....+.. .|+ .....+.+..+.+.++++++++++|.+. .-+..++++.|....+.
T Consensus 488 ~fi~lGsctmk~na~v~~l~~s~~ef~t~hPy-qPe~~sqG~lq~i~elq~~l~eltGmd~--~Sl~p~aGA~gE~agL~ 564 (939)
T TIGR00461 488 SMIPLGSCTMKLNATAEMMPITWPEFSNIHPF-QPSNQVEGYQELIAQLEKWLCSITGFDA--ISLQPNSGAQGEYAGLR 564 (939)
T ss_pred cCCCCccCCCccCHHHHHHHhcchhhcCcCCC-CchHHhHHHHHHHHHHHHHHHHHHCCCC--cccCCchHHHHHHHHHH
Confidence 4666666776666666665333333322 122 1222456688999999999999999983 23444555655554554
Q ss_pred HccCCCC----CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccc
Q 017640 148 SWGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNM 220 (368)
Q Consensus 148 ~~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~ 220 (368)
+.+.++- ..+++|+++...|.++... ++..|.+++.|+.+++|.+|+++|++++++ ++++|++++++|
T Consensus 565 aiR~y~~~rge~~R~~vlip~saHgtnPas----a~~~G~~Vv~V~~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst- 639 (939)
T TIGR00461 565 VIRSYHESRGENHRNICLIPVSAHGTNPAS----AAMAGMQVVPVNCDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST- 639 (939)
T ss_pred HHHHHHHhcCCCCCCEEEEEccccCcCHHH----HHHCCCEEEEeccCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-
Confidence 4421111 2356899999999887543 556699999999999999999999999974 889999999999
Q ss_pred cccccC-HHHHHHHHHhcCCEEEEecCCcCCcccc-cCCCCCccEEEecCcC-cC-----CCCcceEEEEcccccccCCC
Q 017640 221 LASILP-IEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGLDADFLVASSHK-MC-----GPTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 221 tG~~~~-l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~~~~~~d~~~~s~~K-~~-----g~~G~G~l~~~~~li~~l~~ 292 (368)
+|.+.| +++|+++||++|.++++|+++..+...+ +...+++|++++|.|| ++ |++|+|++++++++...+.
T Consensus 640 ~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lP- 718 (939)
T TIGR00461 640 HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLP- 718 (939)
T ss_pred CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcC-
Confidence 788887 9999999999999999999998755544 4467899999999999 55 5666899999987554443
Q ss_pred cccCCcceeecccCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFE--AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
|+........... +.+-+.. ..+-+..-.......+..+-..|+.++.+....+++|+.++|.+.
T Consensus 719 ---g~~v~~t~d~~gr---eq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~ 785 (939)
T TIGR00461 719 ---KHDVVSMITGIGG---SKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH 785 (939)
T ss_pred ---CCcccccccCCCC---ccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3321110000000 0011111 123334444555666667777789999999999999999999874
No 240
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.85 E-value=4.7e-19 Score=165.04 Aligned_cols=228 Identities=18% Similarity=0.207 Sum_probs=162.2
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
..+.+.++..+.+..+. | ..+..+++++.+|+++|.+++ ++++++|+++++..++.++ +++||
T Consensus 34 ~~~~~~~~~~~~~~~~~-----g-------~~~~~~~Le~~lA~~~g~~~e-~ilv~~gg~~a~~~~~~al----~~~gd 96 (346)
T TIGR03576 34 GGFKIDEEDLELLETYV-----G-------PAIFEEKVQELGREHLGGPEE-KILVFNRTSSAILATILAL----EPPGR 96 (346)
T ss_pred CChhHHHHHHHHHHHhc-----C-------CHHHHHHHHHHHHHHcCCCcc-eEEEECCHHHHHHHHHHHh----CCCCC
Confidence 45667777777777652 1 146777999999999999765 8999999999999999998 89999
Q ss_pred EEEEcC---CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc---CHHHHHH
Q 017640 159 EVILTV---AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL---PIEEIVH 232 (368)
Q Consensus 159 ~vl~~~---~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~---~l~~i~~ 232 (368)
+|++.. |.|.+ +...++..|+++..+ . |++.++. .+++++|+++. .+++|.++ ++++|++
T Consensus 97 ~Vli~~~d~p~~~s----~~~~~~l~ga~~~~~--~-----~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~ 162 (346)
T TIGR03576 97 KVVHYLPEKPAHPS----IPRSCKLAGAEYFES--D-----ELSELKK--IDGTSLVVITG-STMDLKVVSEEDLKRVIK 162 (346)
T ss_pred EEEECCCCCCCchh----HHHHHHHcCCEEecc--C-----CHHHHhh--CcCceEEEEEC-CCCCCcccCHHHHHHHHH
Confidence 999753 55555 444556678876432 2 5555543 24678887765 68999995 5889999
Q ss_pred HHHhcCCEEEEecCCcCCcccc-c---CCCCCccEEEecCcCcC-CCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 233 WSHDVGAKVLVDACQSVPHMVV-D---VQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 233 l~~~~g~~li~D~a~~~~~~~~-~---~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
+|++||+++++|++|+.+.... + ....+.|++++|+||.+ |+. +||+++++++++.++.....+.
T Consensus 163 la~~~~~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKalaG~r-~G~v~~~~~li~~l~~~~~~~~--------- 232 (346)
T TIGR03576 163 QAKSKEAIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMDGPR-GGLLAGRKELVDKIKSVGEQFG--------- 232 (346)
T ss_pred HHHHcCCEEEEECCccccccccCCCCCHHHcCCcEEEeccchhccccc-eEEEEeCHHHHHHHHHhhcCcc---------
Confidence 9999999999999999764321 1 11235789999999965 454 6999999999887775432111
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
+ +.+.+.+.++..+|+... .+.+++..++..+++.+.+.+
T Consensus 233 ---------~---s~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~ 272 (346)
T TIGR03576 233 ---------L---EAQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDK 272 (346)
T ss_pred ---------c---CccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHh
Confidence 1 345556666777776432 345566666666666666653
No 241
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.84 E-value=8.6e-20 Score=171.59 Aligned_cols=211 Identities=17% Similarity=0.180 Sum_probs=151.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+...+++++++++. . + +.++++++++|+..++.++ +++||+|++.++.|+.........++..|++++.++.
T Consensus 51 p~~~~Le~~lA~l~--~-~-~~v~~~sG~~Ai~~~l~al----l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 122 (366)
T PRK07582 51 PTWRALEAALGELE--G-A-EALVFPSGMAAITAVLRAL----LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPT 122 (366)
T ss_pred ccHHHHHHHHHHHc--C-C-CEEEECCHHHHHHHHHHHh----cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECC
Confidence 44568999999999 2 2 5566677778999999888 8999999999999987765555455667999999987
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcC--CcccccCCCCCccEEEecC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSV--PHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~--~~~~~~~~~~~~d~~~~s~ 268 (368)
++++ + .+.+++++|++++++||+|.+.|+++|.++|+++|+++++|++|+. +..+++ ++.|+++.|+
T Consensus 123 ~~~~-------~-~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~~~~p~~---~g~Divv~S~ 191 (366)
T PRK07582 123 AGMA-------E-AALAGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPLGQRPLE---LGADLVVASD 191 (366)
T ss_pred CChH-------H-HhccCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCccccCchh---cCCcEEEecc
Confidence 5321 1 2346789999999999999999999999999999999999999863 333443 4689999999
Q ss_pred cCcC-CCCc--ceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 017640 269 HKMC-GPTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (368)
Q Consensus 269 ~K~~-g~~G--~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~ 344 (368)
+|++ |+.| +|+++++ +++++.++.+... ...+++.....-+..++ +. ++.
T Consensus 192 sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~---------------------~g~~~~~~~a~l~~r~l---~t--l~~ 245 (366)
T PRK07582 192 TKALTGHSDLLLGYVAGRDPELMAAVERWRLL---------------------AGAIPGPFEAWLAHRSL---GT--LGL 245 (366)
T ss_pred cccccCCCCeeEEEEEcCcHHHHHHHHHHHHH---------------------hCCCCCHHHHHHHHhcc---cc--HHH
Confidence 9976 4566 6988875 5665555433211 11123322222222222 22 334
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC
Q 017640 345 IHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..+++..+.++|.+++..
T Consensus 246 R~~~~~~na~~la~~L~~~p~v 267 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAV 267 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCc
Confidence 4466778888888888888764
No 242
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.84 E-value=3.2e-19 Score=171.16 Aligned_cols=253 Identities=13% Similarity=0.112 Sum_probs=178.1
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.+..++.+.+++.+.+......+.. ....+...++++.++++++.+. +.+++++|+++|+..++..+. ...
T Consensus 50 lG~~~p~v~~a~~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~-~~v~~~~sgsea~~~al~~~~--~~~ 120 (413)
T cd00610 50 LGHNHPEVVEALKEQLAKLTHFSLG------FFYNEPAVELAELLLALTPEGL-DKVFFVNSGTEAVEAALKLAR--AYT 120 (413)
T ss_pred cCCCCHHHHHHHHHHHHhCcCccCc------ccCCHHHHHHHHHHHHhCCCCC-CEEEEcCcHHHHHHHHHHHHH--HHc
Confidence 4467899999999998654222111 0124556789999999999654 499999999999999998762 146
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHc---------CCEEEEEeCCC------CCCCCHHHHHHhccc---CceEEEEccc
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLND------DESPDLDKLKEMLSR---KTKLVVIHHI 217 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~v~~~~------~~~~d~~~l~~~l~~---~~~~v~~~~~ 217 (368)
+++.|++.++.|++............ ..+++.+|.++ ++..|++.|++.+++ ++++|+++..
T Consensus 121 ~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~ 200 (413)
T cd00610 121 GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPI 200 (413)
T ss_pred CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccc
Confidence 78999999999998765444332110 12356666552 233488999998876 5788899999
Q ss_pred ccccccccC----HHHHHHHHHhcCCEEEEecCCcC-Ccc----cccCCCCCccEEEecCcCcCCC-CcceEEEEccccc
Q 017640 218 SNMLASILP----IEEIVHWSHDVGAKVLVDACQSV-PHM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLL 287 (368)
Q Consensus 218 ~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~-~~~----~~~~~~~~~d~~~~s~~K~~g~-~G~G~l~~~~~li 287 (368)
++++|.+.| +++|.++|++||+++|+|++|+. +.. ..+.....+|++ +++|.+++ ..+|+++.+++++
T Consensus 201 ~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~g~~~g~~~~~~~~~ 278 (413)
T cd00610 201 QGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGGGLPLGAVLGREEIM 278 (413)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccCccccEEEEEcHHHH
Confidence 999999987 99999999999999999999873 111 112222346655 56697775 2289999999888
Q ss_pred ccC--CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 288 SAM--PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 288 ~~l--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+ .+... ....+.+...++++.++++.+++ +.+.++.+++.+++.+.+++.
T Consensus 279 ~~~~~~~~~~---------------------~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 279 DAFPAGPGLH---------------------GGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLREL 332 (413)
T ss_pred HhhccCCCCC---------------------CCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 775 11111 11224566677788888888876 356677888888888877654
No 243
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.84 E-value=5.1e-19 Score=167.28 Aligned_cols=256 Identities=16% Similarity=0.150 Sum_probs=169.4
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
..+.-.+++.+.+...... +..+..+++++.+++++|.+ ++++++|+++|+.+++.++ .+++||
T Consensus 9 ~~~~~~~~~~~~l~~~~~~----------g~~~~~~~~e~~la~~~g~~---~~v~~~sgt~al~~~l~~~---~~~~Gd 72 (375)
T PRK11706 9 VVGTELDYIQQAMSSGKLC----------GDGGFTRRCQQWLEQRFGSA---KVLLTPSCTAALEMAALLL---DIQPGD 72 (375)
T ss_pred CCHHHHHHHHHHHHcCCcc----------CCCHHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHh---CCCCCC
Confidence 3445566666665532111 01345567888899999885 7899999999999988766 378999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|+++.++|+++... +...|++++.++++++ +.+|++++++++++++++|++++ ++|...++++|.++|++|
T Consensus 73 ~Viv~~~t~~~~~~~----~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~ 145 (375)
T PRK11706 73 EVIMPSYTFVSTANA----FVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKH 145 (375)
T ss_pred EEEECCCCcHHHHHH----HHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHc
Confidence 999999988886543 4556999999999866 57899999999999999998765 599999999999999999
Q ss_pred CCEEEEecCCcCCcccccCCCC--CccEEEecCc--CcCCCCcce-EEEEcccccccCCCcccCCcceeecccCC-CCCC
Q 017640 238 GAKVLVDACQSVPHMVVDVQGL--DADFLVASSH--KMCGPTGIG-FLFGKSDLLSAMPPFLGGGEMISDVFLDH-STFA 311 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~~~~~~--~~d~~~~s~~--K~~g~~G~G-~l~~~~~li~~l~~~~~g~~~~~~~~~~~-~~~~ 311 (368)
|+++|+|++|+.+.. .+-... ..|+.++|+| |.+++...| ++..++++.++++.....|......+... ..+
T Consensus 146 ~i~vIeD~a~a~g~~-~~~~~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~- 223 (375)
T PRK11706 146 NLFVVEDAAQGVMST-YKGRALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKY- 223 (375)
T ss_pred CCEEEEECccccccc-cCCeeeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcc-
Confidence 999999999998863 221111 2477788877 987753345 44445677766665443322111100000 000
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 312 DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 312 ~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.....|+.....-+.++..+..++. ++.+.++.+++.++..+.|.+..
T Consensus 224 ---~~~~~g~~~~~~~~~aa~~~~ql~~--l~~~~~~R~~~~~~~~~~L~~~~ 271 (375)
T PRK11706 224 ---TWVDIGSSYLPSELQAAYLWAQLEA--ADRINQRRLALWQRYYDALAPLA 271 (375)
T ss_pred ---eeeecccccCcCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCC
Confidence 0001122221111222223333333 56677777788888888887654
No 244
>PRK07505 hypothetical protein; Provisional
Probab=99.84 E-value=7.1e-19 Score=168.01 Aligned_cols=260 Identities=12% Similarity=0.162 Sum_probs=169.3
Q ss_pred CeEEeccCCCC----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 67 KLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 67 ~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+..|+|..+.+ ..++.+.+++.+++..+. +.+.+. .......+...++++.++++++. . .++++ ++++|+
T Consensus 45 g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g-~~~~~~-~~~~~~~~~~~~l~~~la~~~~~--~-~~~~~-sG~~a~ 118 (402)
T PRK07505 45 GHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTG-SLHLSS-SRTRVRSQILKDLEEALSELFGA--S-VLTFT-SCSAAH 118 (402)
T ss_pred CceEEEeecCCccCCCCCHHHHHHHHHHHHHhC-CCCCCc-cchhhhhHHHHHHHHHHHHHhCC--C-EEEEC-ChHHHH
Confidence 44566665433 459999999999998753 111111 11112466778999999999986 2 44555 556788
Q ss_pred HHHHHHccCCCCCCCC-EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 143 NLVAYSWGLSNLKSGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
..++..+......+|+ .+++.+..+|+.........+ .+.+++.+|.. |++.++++++++++++++++++||+
T Consensus 119 ~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~-----d~~~l~~~~~~~~~~~vl~~p~~~~ 192 (402)
T PRK07505 119 LGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHN-----DLDALEDICKTNKTVAYVADGVYSM 192 (402)
T ss_pred HHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCC-----CHHHHHHHHhcCCCEEEEEeccccc
Confidence 8777654211123232 355555455443322222222 35678888865 8999999998778899999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcc-------ccc-CC--CCCccEEEecCcCcCCCCcceEEEE-cccccccC
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHM-------VVD-VQ--GLDADFLVASSHKMCGPTGIGFLFG-KSDLLSAM 290 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-------~~~-~~--~~~~d~~~~s~~K~~g~~G~G~l~~-~~~li~~l 290 (368)
|.+.|+++|.++|++||+++|+|++|+.+.. ..+ .. ..+..+++.|++|.+|++| |++++ ++++++.+
T Consensus 193 G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G-g~~~~~~~~~~~~~ 271 (402)
T PRK07505 193 GGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG-GVIMLGDAEQIELI 271 (402)
T ss_pred CCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC-eEEEeCCHHHHHHH
Confidence 9999999999999999999999999864211 111 11 2234678889999988776 77765 66676665
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSII 358 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~ 358 (368)
.....++ .| .++++..+.+++.++++.+.+..+....+++.+....+..
T Consensus 272 ~~~~~~~------------------t~-~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~ 320 (402)
T PRK07505 272 LRYAGPL------------------AF-SQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDS 320 (402)
T ss_pred HHhCCCc------------------ee-CCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHH
Confidence 4322211 11 3467777888888888876655555555555555554433
No 245
>PRK08637 hypothetical protein; Provisional
Probab=99.84 E-value=3.1e-19 Score=169.74 Aligned_cols=166 Identities=18% Similarity=0.155 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHcC-----CCCC--CcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC
Q 017640 111 DEYELARKKVAAFIN-----ASDS--GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA 183 (368)
Q Consensus 111 ~~~~~~r~~la~~~~-----~~~~--~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 183 (368)
.....+|+.+++++. ..++ ++|++|+|+++++.+++.++ +++||.|++.+|.|+.....+ +...|+
T Consensus 44 ~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l----~~~gd~Vlv~~P~y~~~~~~~---~~~~g~ 116 (388)
T PRK08637 44 QGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF----VDQGDTVLLPDHNWGNYKLTF---NTRRGA 116 (388)
T ss_pred CCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh----cCCCCEEEEcCCCCccHHHHH---HHhcCC
Confidence 334567777777653 2222 47899999999999999988 899999999999888744322 234699
Q ss_pred EEEEEeCC-CCCCCCHHHHHHhcc----cCceEEEEcccccccccccC---HHHHHHHHHh-----cCCEEEEecCCcCC
Q 017640 184 NLKFLNLN-DDESPDLDKLKEMLS----RKTKLVVIHHISNMLASILP---IEEIVHWSHD-----VGAKVLVDACQSVP 250 (368)
Q Consensus 184 ~v~~v~~~-~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~-----~g~~li~D~a~~~~ 250 (368)
+++.+++. +++.+|+++++++++ +.++++++++|+||||.+++ +++|+++|++ |+++||+|++|..-
T Consensus 117 ~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l 196 (388)
T PRK08637 117 EIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGL 196 (388)
T ss_pred EEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhc
Confidence 99999984 556789999999886 45567889999999999999 6677777764 89999999998621
Q ss_pred c----c--cc--cC-CCCCc--cEEEecCcCcCCCCc--ceEEEEc
Q 017640 251 H----M--VV--DV-QGLDA--DFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 251 ~----~--~~--~~-~~~~~--d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
. . ++ .+ +..+. .+++.|++|.|+.+| +||+++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~ 242 (388)
T PRK08637 197 FYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFG 242 (388)
T ss_pred ccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEc
Confidence 1 1 10 11 11122 234559999988888 9999865
No 246
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.84 E-value=2.1e-18 Score=177.28 Aligned_cols=278 Identities=15% Similarity=0.129 Sum_probs=183.2
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-CHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~-g~t~a~~~ 144 (368)
..++.|+. .+...++.+...+...-.-..-.|+ .....+.+..+.+.++++++++++|.+ ++.+++ ++++|...
T Consensus 499 ~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~-qp~e~~qG~l~~i~e~q~~l~eltG~d---~~sl~~~~ga~ge~a 573 (954)
T PRK05367 499 RSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPF-APAEQAAGYRELIDQLEAWLAEITGYD---AVSLQPNAGAQGEYA 573 (954)
T ss_pred cceeeCCc-CCCcCCHHHHHHHHhCccccccCCC-ChHHHHHHHHHHHHHHHHHHHHHHCCC---CEEECccHHHHHHHH
Confidence 45677777 3335555555554433211111122 111334567899999999999999986 566665 44555534
Q ss_pred HHHHccCCCCCCCC----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEccc
Q 017640 145 VAYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHI 217 (368)
Q Consensus 145 ~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~ 217 (368)
.+.+++..+.++|+ +|++++..|.++... +...|.+++.++++.+|.+|+++|++++++ ++.+|+++++
T Consensus 574 gL~a~r~~~~~~G~~~r~~vlis~~aH~snp~s----a~~~G~~vv~v~~d~~G~iD~~~L~~~i~~~~~~la~V~it~p 649 (954)
T PRK05367 574 GLLAIRAYHESRGEGHRDVCLIPSSAHGTNPAS----AVMAGMKVVVVACDENGNIDLDDLRAKAEEHADNLAAIMITYP 649 (954)
T ss_pred HHHHHHHHhhccCCCCCCEEEEEchhhhhhHHH----HHHCCCEEEEECCCCCCCcCHHHHHHHHhccCCCeEEEEEEcC
Confidence 33333211345554 699999999987654 456699999999998899999999999965 4678889998
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-CCCCCccEEEecCcCcC------CCCcceEEEEcccccccC
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-VQGLDADFLVASSHKMC------GPTGIGFLFGKSDLLSAM 290 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-~~~~~~d~~~~s~~K~~------g~~G~G~l~~~~~li~~l 290 (368)
++..+...|+++|+++||++|+++++|+++..+...+. ...++.|++++|+||+| |++|+|++++++.+.
T Consensus 650 st~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~--- 726 (954)
T PRK05367 650 STHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLA--- 726 (954)
T ss_pred CCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEEecCcccCCCCcCCCCCceEEEeeccccc---
Confidence 88744457899999999999999999999986655553 34678999999999974 455688999986554
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH---HHHHHHHHHHHHHHHHHHhhc
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ---KIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~---~i~~~~~~l~~~l~~~l~~~~ 364 (368)
|++.|+....... .....+.. +.++.+...+..+..++...|.+ ++.++...+++|+.++|.+..
T Consensus 727 -p~lpg~~v~~~~~-------~~~~g~v~-ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~ 794 (954)
T PRK05367 727 -PFLPGHPVQIAGG-------ETGIGAVS-AAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHY 794 (954)
T ss_pred -ccCCCCccCcCCC-------CCCcCcch-hHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444432110000 00001111 33333334455556666666555 555555599999999998764
No 247
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.84 E-value=7.8e-19 Score=161.63 Aligned_cols=253 Identities=15% Similarity=0.108 Sum_probs=176.9
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
......+++.+.+...+-.+ .+..+++++.+++++|+. ..+.++|+|.|+.++++++ .+.+||
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-----------G~~v~~FE~~~ae~~G~k---~ava~~sgT~AL~laL~al---~ig~GD 75 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-----------GPFVRRFEQAFAEYLGVK---YAVAVSSGTAALHLALLAL---AIGPGD 75 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-----------ChHHHHHHHHHHHHhCCC---eEEEecChHHHHHHHHHhc---CCCCCC
Confidence 45667777777776532221 344568999999999998 6688899999999999988 489999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|++++-.|.++..... ..|+++++|+++++ +.+|++.||++|+++||+|+..|. -|...++++|.++|++|
T Consensus 76 eVI~ps~TfvATan~i~----~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIipVhl---~G~~~dm~~i~~la~~~ 148 (374)
T COG0399 76 EVIVPSFTFVATANAVL----LVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIPVHL---AGQPCDMDAIMALAKRH 148 (374)
T ss_pred EEEecCCchHHHHHHHH----HcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEEehh---ccCCCCHHHHHHHHHHc
Confidence 99999998887655443 45999999999966 999999999999999999999998 88999999999999999
Q ss_pred CCEEEEecCCcCCcccccCCCC--CccEEEecC--cCcCCCCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCC
Q 017640 238 GAKVLVDACQSVPHMVVDVQGL--DADFLVASS--HKMCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFAD 312 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~~~~~~--~~d~~~~s~--~K~~g~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~ 312 (368)
|++||.|++|+.|.. ..-... --|+.++|| .|.++-...|++..++ ++.++++....-|-.... ..+|..
T Consensus 149 ~l~vIEDaAqa~Ga~-y~gk~vGt~Gd~~~fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~----~~~y~~ 223 (374)
T COG0399 149 GLPVIEDAAQAHGAT-YKGKKVGSFGDIGAFSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDA----VFKYLH 223 (374)
T ss_pred CCeEEEEcchhccCe-ecCcccccccceEEEEecCCCCccccCceEEEeCCHHHHHHHHHHHHhCcCCCc----ccccee
Confidence 999999999999886 222221 135555555 4666543457777766 455666544332221100 001111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 313 PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 313 ~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..-.+..--.+ +.+|+-..+-..++.+.++.++++++..+.|++.+++
T Consensus 224 ~~~G~N~rm~~------iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~ 271 (374)
T COG0399 224 EELGYNYRLTE------IQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGI 271 (374)
T ss_pred eecccccCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 11112111112 2222332232236778888889999999999887654
No 248
>PRK10534 L-threonine aldolase; Provisional
Probab=99.84 E-value=8.9e-20 Score=170.00 Aligned_cols=204 Identities=16% Similarity=0.184 Sum_probs=141.9
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
-|..+....+++.+.+++.+....... +.......++++.+++++|.+ .+++++|+++++..++.++
T Consensus 3 ~~~~~~~~~p~~~~~~a~~~~~~~~~~----------Y~~~~~~~~L~~~la~~~g~~---~~~v~~~g~~a~~~~l~~~ 69 (333)
T PRK10534 3 DLRSDTVTRPSRAMLEAMMAAPVGDDV----------YGDDPTVNALQDYAAELSGKE---AALFLPTGTQANLVALLSH 69 (333)
T ss_pred ccccccCCCCCHHHHHHHHhccCCCcc----------cCCCHHHHHHHHHHHHHhCCC---eEEEeCchHHHHHHHHHHh
Confidence 344455555888999998654332111 111345568999999999986 3468888888888888776
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccccccccc
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLAS 223 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~ 223 (368)
+.+||+|+++.+.|...+... ......+++++.++.++++.+|+++|++++++ ++++|++++++ ||.
T Consensus 70 ----~~~gd~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 70 ----CERGEEYIVGQAAHNYLYEAG-GAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred ----cCCCCeeEEechhhhhHhcCC-chHHhcCceEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 789999999888775433211 01112236888888887899999999999976 58899999755 699
Q ss_pred ccCHH---HHHHHHHhcCCEEEEecCCcCCcc---cccCC--CCCccEEEecCcCcCCCCcce-EEEEcccccccCCCcc
Q 017640 224 ILPIE---EIVHWSHDVGAKVLVDACQSVPHM---VVDVQ--GLDADFLVASSHKMCGPTGIG-FLFGKSDLLSAMPPFL 294 (368)
Q Consensus 224 ~~~l~---~i~~l~~~~g~~li~D~a~~~~~~---~~~~~--~~~~d~~~~s~~K~~g~~G~G-~l~~~~~li~~l~~~~ 294 (368)
++|.+ +|.++|++||+++++|++|..+.. ..... ....|.++.|+||.||.+ +| +++.++++++.++...
T Consensus 143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~-~G~~~~~~~~~i~~~~~~~ 221 (333)
T PRK10534 143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTP-VGSLLVGNRDYIKRARRWR 221 (333)
T ss_pred ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhcCCEEEEEeEcCCCCc-ccceEEcCHHHHHHHHHHH
Confidence 99955 556788999999999999774321 00110 112465566899988865 56 6888999888776443
No 249
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=4.7e-19 Score=166.83 Aligned_cols=232 Identities=17% Similarity=0.188 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
...+++++.+++++|.+ .++.++|+|.|+.+++.++ .+++||+|+++...++++..++.. .|++++++++
T Consensus 25 ~~~~~fE~~~a~~~g~~---~~~~~~sgt~Al~~al~~l---~~~~gdeVi~p~~t~~~~~~ai~~----~G~~pv~~Di 94 (363)
T PF01041_consen 25 PYVEEFEKEFAEYFGVK---YAVAVSSGTSALHLALRAL---GLGPGDEVIVPAYTFPATASAILW----AGAEPVFVDI 94 (363)
T ss_dssp HHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHT---TGGTTSEEEEESSS-THHHHHHHH----TT-EEEEE-B
T ss_pred HHHHHHHHHHHHHhCCC---eEEEeCChhHHHHHHHHhc---CCCcCceEecCCCcchHHHHHHHH----hccEEEEEec
Confidence 45668999999999976 7899999999999999998 588999999999988887655544 4999999999
Q ss_pred C-CCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc--CCCCCccEEEec
Q 017640 191 N-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--VQGLDADFLVAS 267 (368)
Q Consensus 191 ~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~--~~~~~~d~~~~s 267 (368)
+ +++.+|++.+++++++++++|++.|. .|...++++|.++|++||++||.|++|++|..--. ... .-|+.++|
T Consensus 95 ~~~~~~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~-~gd~~~fS 170 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGS-FGDIAIFS 170 (363)
T ss_dssp ETTTSSB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTS-SSSEEEEE
T ss_pred cCCcCCcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccC-CCCceEec
Confidence 9 56999999999999999999999998 78888999999999999999999999999875211 122 24888888
Q ss_pred Cc--CcCCCCcceEEEEccc-ccccCCCcccCCcceeecccCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 268 SH--KMCGPTGIGFLFGKSD-LLSAMPPFLGGGEMISDVFLDHSTFADPP-SRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 268 ~~--K~~g~~G~G~l~~~~~-li~~l~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
++ |.+.....|+++++++ +.++++.+...|... . ....+.... -.+.....+ +.++.++..++ .++
T Consensus 171 f~~~K~i~~geGG~v~~~~~~~~~~~~~~~~~g~~~-~---~~~~~~~~~~~g~n~rm~~----~~AAigl~QL~--~L~ 240 (363)
T PF01041_consen 171 FHPTKIITTGEGGAVVTNDPELAERARALRNHGRSR-D---AFRRYRHELPPGYNFRMSE----LQAAIGLAQLK--RLD 240 (363)
T ss_dssp SSTTSSS-SSS-EEEEESTHHHHHHHHHHTBTTEET-S---ECSTTEESSSS--B-B-BH----HHHHHHHHHHH--THH
T ss_pred CCCCCCCcCCCCeeEEecHHHHHHHhhhhhccCcCc-c---ccccccccccCCcccccHH----HHHHHHHHHHH--Hhh
Confidence 85 7665443689888764 444444332211110 0 000000000 011111111 12222333333 367
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC
Q 017640 344 KIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
...++.+++.+++.+.|.+++++
T Consensus 241 ~~~~~R~~~a~~y~~~L~~~~~~ 263 (363)
T PF01041_consen 241 EIIARRRENAQRYREALAGIPGI 263 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTTGTTE
T ss_pred hhHHHHHHHHHHHHHHHhcCCCc
Confidence 77888889999999999988764
No 250
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.83 E-value=1.3e-18 Score=166.02 Aligned_cols=246 Identities=15% Similarity=0.163 Sum_probs=168.4
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
++.++.+.+++.+.+....... ..+. .....++.+.++++++.+..+++++++|+++|+..+++.+. ...
T Consensus 58 G~~~p~v~~ai~~~~~~~~~~~--~~~~-----~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~---~~g 127 (398)
T PRK03244 58 GHAHPAVVEAVTRQLATLGHVS--NLFA-----TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLAR---LTG 127 (398)
T ss_pred CCCCHHHHHHHHHHHHhccCcc--CccC-----CHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHH---HHC
Confidence 4557999999999888643211 1111 12234789999999886433489999999999999999762 222
Q ss_pred CCEEEEcCCCCcccHHHHHHHHHH---------cCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC-
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQK---------TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP- 226 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~- 226 (368)
++.|+..++.|++........... .+.++..+|. .|++.+++.+.+++++|+++.++||+|.+.|
T Consensus 128 ~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~ 202 (398)
T PRK03244 128 RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-----GDVDALAAAVDDDTAAVFLEPIQGEAGVVPPP 202 (398)
T ss_pred CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-----CCHHHHHHhhcCCeEEEEEecccCCCCCcCCC
Confidence 356777777888765433322110 0112333333 2789999999878999999999999999998
Q ss_pred ---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCC-CcceEEEEcccccccCCCcccCC
Q 017640 227 ---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 227 ---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~ 297 (368)
+++|.++|++||+++|+||+|+ +|.. .+......+|++ +++|.+|+ -.+|++++++++++.+.+...+
T Consensus 203 ~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~- 279 (398)
T PRK03244 203 AGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV--TLAKGLGGGLPIGACLAFGPAADLLTPGLHG- 279 (398)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEE--EEchhhhCCcccEEEEEcHHHHhhccCCCCc-
Confidence 8899999999999999999986 2211 112233457876 55698773 2289999999887766543211
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..| ..+.....++.++++.+.+ +.+.+++.++.+++.+.|++.
T Consensus 280 -----------------~t~---~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~ 322 (398)
T PRK03244 280 -----------------STF---GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL 322 (398)
T ss_pred -----------------CCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc
Confidence 111 3455666667777776654 346688888888888888764
No 251
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.1e-19 Score=154.57 Aligned_cols=319 Identities=14% Similarity=0.150 Sum_probs=248.8
Q ss_pred cchhhhhcCCCCccccccc---------CCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHH-HHHHHH
Q 017640 45 VSLGHITRPDFPILHQEVY---------GSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAK-ATDEYE 114 (368)
Q Consensus 45 ~~~~~~~r~~f~~~~~~~~---------~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 114 (368)
.+..+.+|+.|-+-.-..- .+...|||=.++.|.+|+.+.+.+.+.++.|..-.- -.|..|.. |...-+
T Consensus 36 ~d~l~~~Rd~F~iPk~~~lp~~d~sLv~~d~~~iYlcGNSLGLmPK~t~~~~~~eLDkWak~av-~gH~~GkvPW~~~De 114 (465)
T KOG3846|consen 36 SDYLESLRDEFNIPKFKSLPDADPSLVSDDKPVIYLCGNSLGLMPKSTRNSINAELDKWAKCAV-EGHFKGKVPWVSIDE 114 (465)
T ss_pred chhHHHHHHHhcCCccccCCCCCccccCCCCCeEEEeccccccCchhhHhHHHHHHHHHHhhhh-hcccccccceeecch
Confidence 3455677877754321111 136789999999999999999999999988754322 12333322 333344
Q ss_pred HHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEE----EEEeC
Q 017640 115 LARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANL----KFLNL 190 (368)
Q Consensus 115 ~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v----~~v~~ 190 (368)
.+-..++...|+... +|.++++-|.-+..++.+|=. +..++-+|++....|+|..+++..-++..|..+ +.+..
T Consensus 115 ~il~l~~~iVGA~e~-EvavmNsLTvNlh~Ll~sFyK-PTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~ieP 192 (465)
T KOG3846|consen 115 PILPLLAPIVGAQEN-EVAVMNSLTVNLHSLLISFYK-PTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEP 192 (465)
T ss_pred hhhhhhhhhccCCch-hhhhHhhhhhHHHHHHHHhcC-CcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecc
Confidence 577788999999875 899999999889988888811 223344799999999999999999999988764 33433
Q ss_pred CCC-CCCCHHHHHHhccc---CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEe
Q 017640 191 NDD-ESPDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVA 266 (368)
Q Consensus 191 ~~~-~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~ 266 (368)
.+. ..+..+++.+.|.. ..++|+++.++..||+.+++.+|...-+..|+++=.|-+|++|.+|+-+.+|++||.|.
T Consensus 193 REGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACW 272 (465)
T KOG3846|consen 193 REGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACW 272 (465)
T ss_pred cccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEE
Confidence 322 45566777766654 46899999999999999999999976677899999999999999999999999999999
Q ss_pred cCcCcC--CCCcceEEEEcccccccCCCcccCCcceee---ccc-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 267 SSHKMC--GPTGIGFLFGKSDLLSAMPPFLGGGEMISD---VFL-DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 267 s~~K~~--g~~G~G~l~~~~~li~~l~~~~~g~~~~~~---~~~-~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
..+|.+ |+.|+|-+++.++.....+|.+.||....- +.+ +-.++.+...+|....|++..++++..+++.+.+.
T Consensus 273 CSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~ 352 (465)
T KOG3846|consen 273 CSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQF 352 (465)
T ss_pred eeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHh
Confidence 999943 566688899999988888899988876542 112 22556677888998899999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 341 GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++.++++..-|..|+...++...|.
T Consensus 353 ~~~~lRkrS~lLTgYleyL~k~~~g~ 378 (465)
T KOG3846|consen 353 NINELRKRSLLLTGYLEYLLKASKGY 378 (465)
T ss_pred hHHHHhhhhhhHHhHHHHHHHHhccc
Confidence 99999999999999999988877663
No 252
>PLN02397 aspartate transaminase
Probab=99.83 E-value=3.6e-19 Score=170.75 Aligned_cols=269 Identities=13% Similarity=0.047 Sum_probs=163.2
Q ss_pred CCeEEeccCCC-CC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC-----CCcE--EEeC
Q 017640 66 KKLVYLDNAAT-SQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-----SGEI--VFTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~-~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-----~~~v--~~t~ 136 (368)
+..+.++.+.. .+ .++.+.+.+.+.......... ...+.......++|+++++++.... ++.| ..+.
T Consensus 48 ~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~----~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~ 123 (423)
T PLN02397 48 PVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSR----NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCL 123 (423)
T ss_pred cceEecccceeeCCCCCcccchHHHHHHHHhhccCC----CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecc
Confidence 45677777752 33 344555555555433211111 1112224455688888888763321 1233 1133
Q ss_pred CHHHH--HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-C-CCCCCCHHHHHHhcc---cCc
Q 017640 137 NATEA--INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-N-DDESPDLDKLKEMLS---RKT 209 (368)
Q Consensus 137 g~t~a--~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~-~~~~~d~~~l~~~l~---~~~ 209 (368)
+++.+ +...+..+ +.+||+|++++|.|+. +...++..|++++.+++ + +++.+|++.+++.+. +++
T Consensus 124 ~g~Ga~~l~~~~~~~----~~pGd~Vlv~~P~y~~----y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~ 195 (423)
T PLN02397 124 SGTGSLRLGAEFLAR----FYPGSTIYIPNPTWGN----HHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGS 195 (423)
T ss_pred cchHHHHHHHHHHHH----hCCCCEEEEeCCCchh----HHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCC
Confidence 33333 33333333 5699999999998877 45556677999999997 3 347889998887775 467
Q ss_pred eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc--------cc-cCCC-CCccEEEecCcCcCCCCc
Q 017640 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--------VV-DVQG-LDADFLVASSHKMCGPTG 276 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~--------~~-~~~~-~~~d~~~~s~~K~~g~~G 276 (368)
+++++++|+||||.+++ +++|+++|++||+++|+|++|..-.. ++ .+.. ....+++.|+||.|+++|
T Consensus 196 ~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G 275 (423)
T PLN02397 196 FVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYG 275 (423)
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCcc
Confidence 89999999999999999 67888899999999999999872211 11 1111 124588889999999988
Q ss_pred --ceEEE--E-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---HHh--CHHHHH
Q 017640 277 --IGFLF--G-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL---STI--GMQKIH 346 (368)
Q Consensus 277 --~G~l~--~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~---~~~--g~~~i~ 346 (368)
+||++ + ++++++.+....... .+......+.....++..+++.- +.. .++.++
T Consensus 276 ~RvG~~v~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~ 338 (423)
T PLN02397 276 ERVGALSVVCKSADVAVRVKSQLKLI-----------------ARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMA 338 (423)
T ss_pred ccceEEEEEeCCHHHHHHHHHHHHHH-----------------HhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 99985 4 344433222110000 00001123444444444444321 111 145677
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++.++.++.+.+.|.++
T Consensus 339 ~~~~~rr~~l~~~L~~~ 355 (423)
T PLN02397 339 DRIISMRQKLYDALEAR 355 (423)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 78888888888888876
No 253
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.83 E-value=3.5e-20 Score=172.87 Aligned_cols=225 Identities=19% Similarity=0.214 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
...+.+.++.+|+.+|++. ..++++|+|.++..++.++ +++||.|++...+|.|++.++. ..|+++++++
T Consensus 65 ~G~I~eAe~~aA~~fGAd~--t~flvnGsT~g~~a~i~a~----~~~gd~VLv~RN~HkSv~~ali----l~ga~Pvyi~ 134 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADK--TFFLVNGSTSGNQAMIMAL----CRPGDKVLVDRNCHKSVYNALI----LSGAIPVYIP 134 (417)
T ss_dssp BTHHHHHHHHHHHHHTESE--EEEESSHHHHHHHHHHHHH----TTTTCEEEEETT--HHHHHHHH----HHTEEEEEEE
T ss_pred ccHHHHHHHHHHHhcCCCe--EEEEecCchHHHHHHHHHh----cCCCCEEEEcCCcHHHHHHHHH----HcCCeEEEec
Confidence 3457789999999999983 6788899999999999998 9999999999999999887544 4499999998
Q ss_pred CCCC-----CCCCH-----HHHHHhcccC-----ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCc--c
Q 017640 190 LNDD-----ESPDL-----DKLKEMLSRK-----TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH--M 252 (368)
Q Consensus 190 ~~~~-----~~~d~-----~~l~~~l~~~-----~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~--~ 252 (368)
...+ +.+++ +.++++|++. ++++++++|+. .|.++++++|+++|+++++.|++|+||+.-. .
T Consensus 135 p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 135 PEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp EEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred CCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 7622 34566 8899988753 24489999854 7999999999999999999999999998421 1
Q ss_pred cc--cCCCCCcc-------EEEecCcCcC-CCCcceEEEEcccc-cc--cCCCcccCCcceeecccCCCCCCCCCCCCCC
Q 017640 253 VV--DVQGLDAD-------FLVASSHKMC-GPTGIGFLFGKSDL-LS--AMPPFLGGGEMISDVFLDHSTFADPPSRFEA 319 (368)
Q Consensus 253 ~~--~~~~~~~d-------~~~~s~~K~~-g~~G~G~l~~~~~l-i~--~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (368)
++ +.-..+.| +++-|.||.+ +....++|.++.+. ++ +++..+ ..+.+
T Consensus 214 ~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l--------------------~~~~T 273 (417)
T PF01276_consen 214 PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEAL--------------------SMHQT 273 (417)
T ss_dssp GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHH--------------------HHHS-
T ss_pred CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHH--------------------HHHcC
Confidence 22 23345788 9999999965 46668999998875 32 222211 23456
Q ss_pred CCCCHHHHHHHHHHHHHH-HHhCHHHHHHHHHHHHHHHHHHH---HhhcCC
Q 017640 320 GTPAIGEAIGLGAAIDYL-STIGMQKIHAYEVKWIICSIIVI---QERHNT 366 (368)
Q Consensus 320 gt~~~~~~~a~~~al~~~-~~~g~~~i~~~~~~l~~~l~~~l---~~~~g~ 366 (368)
.+|+++.++++..+.+++ ...| +++.++..+++..++++| .+++++
T Consensus 274 TSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~ 323 (417)
T PF01276_consen 274 TSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGF 323 (417)
T ss_dssp SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SS
T ss_pred CChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 789999999999999999 4444 666688888888899998 445554
No 254
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.1e-18 Score=155.19 Aligned_cols=167 Identities=19% Similarity=0.286 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.++++++.+-|--.. +.+.++..|+..++..+ .++||.|+.++.-|.+++..+....++.|+++++|.
T Consensus 61 NPT~~vlE~RiAaLEGG~aa---~a~aSG~AA~~~ai~~l----a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 61 NPTTDVLEERIAALEGGVAA---LAVASGQAAITYAILNL----AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred CchHHHHHHHHHHhhcchhh---hhhccchHHHHHHHHHh----ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 45556789999998886533 67778889999999988 899999999999999999999998899999999999
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |++.++++|+++||+|+++...||.+.+.|++.|+++||+||+++|+|.+-+.+.+ +..-+.+.|+++.|.+
T Consensus 134 ~~-----d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpyl-~rP~~hGADIVvHS~T 207 (426)
T COG2873 134 PD-----DPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPYL-CRPIEHGADIVVHSAT 207 (426)
T ss_pred CC-----CHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCccee-cchhhcCCCEEEEeec
Confidence 77 89999999999999999999999999999999999999999999999999988755 3344678999999999
Q ss_pred CcCCCCc--ceEEEEccccccc
Q 017640 270 KMCGPTG--IGFLFGKSDLLSA 289 (368)
Q Consensus 270 K~~g~~G--~G~l~~~~~li~~ 289 (368)
|+.|+.| +|-++++-...+.
T Consensus 208 K~igGhGt~iGG~iVD~G~FDw 229 (426)
T COG2873 208 KYIGGHGTAIGGVIVDGGKFDW 229 (426)
T ss_pred ccccCCccccceEEEeCCcccc
Confidence 9999888 6666665544443
No 255
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.83 E-value=2.8e-19 Score=167.49 Aligned_cols=224 Identities=18% Similarity=0.174 Sum_probs=165.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC
Q 017640 103 HFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG 182 (368)
Q Consensus 103 ~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g 182 (368)
+.+++...+....+++.|+++.|.. .++++++|..|+..++.++ +++||+|+++...|.+++..+.......|
T Consensus 47 ~~Y~R~gnPt~~~le~~la~Le~g~---~a~~~~SGmaAi~~~l~~l----l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~g 119 (386)
T PF01053_consen 47 YIYSRYGNPTVRALEQRLAALEGGE---DALLFSSGMAAISAALLAL----LKPGDHIVASDDLYGGTYRLLEELLPRFG 119 (386)
T ss_dssp CSBTTTC-HHHHHHHHHHHHHHT-S---EEEEESSHHHHHHHHHHHH----S-TTBEEEEESSSSHHHHHHHHHCHHHTT
T ss_pred cceeccccccHHHHHHHHHHhhccc---ceeeccchHHHHHHHHHhh----cccCCceEecCCccCcchhhhhhhhcccC
Confidence 4445555677778999999999985 6788899999999999998 89999999999999999988888888899
Q ss_pred CEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC-CEEEEecCCcCCcccccCCCCCc
Q 017640 183 ANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG-AKVLVDACQSVPHMVVDVQGLDA 261 (368)
Q Consensus 183 ~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g-~~li~D~a~~~~~~~~~~~~~~~ 261 (368)
+++.+++.. |++++++++++++++|+++.|.||+..+.|+++|+++||++| +++++|.+.+.+.. .+.-.++.
T Consensus 120 v~v~~~d~~-----d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~atp~~-~~pL~~Ga 193 (386)
T PF01053_consen 120 VEVTFVDPT-----DLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFATPYN-QNPLELGA 193 (386)
T ss_dssp SEEEEESTT-----SHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTHTTT-C-GGGGT-
T ss_pred cEEEEeCch-----hHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccceee-eccCcCCc
Confidence 999999876 899999999999999999999999999999999999999998 99999999986643 22234679
Q ss_pred cEEEecCcCcCCCCc---ceEEEEcc--cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPTG---IGFLFGKS--DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 262 d~~~~s~~K~~g~~G---~G~l~~~~--~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
|+++.|++|++++.+ +|.+++++ ++.+.++....-.+ .+.+... +...++-
T Consensus 194 Divv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G---------------------~~~~p~d---a~ll~rg 249 (386)
T PF01053_consen 194 DIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLG---------------------ATLSPFD---AWLLLRG 249 (386)
T ss_dssp SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT----------------------B--HHH---HHHHHHH
T ss_pred eEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcC---------------------ccchHHH---HHHHhcC
Confidence 999999999998887 88888776 55554442211000 0111111 1111222
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 337 LSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 337 ~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+++ +....++..+.+..+.++|.+++.
T Consensus 250 l~T--l~~R~~~~~~nA~~lA~~L~~hp~ 276 (386)
T PF01053_consen 250 LRT--LPLRMERQNENAEALAEFLEEHPK 276 (386)
T ss_dssp HTT--HHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred CCc--HHHHHHHHHHHHHHHHHHHHhCCC
Confidence 222 455556777888888888888765
No 256
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.82 E-value=1.8e-18 Score=164.63 Aligned_cols=255 Identities=16% Similarity=0.157 Sum_probs=167.7
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|..+ .|+.+|.+.+++.+.+........ .. ..+...++.+.+++..+. +.+++++|+++
T Consensus 30 G~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~---~~----~~~~~~~la~~l~~~~~~---~~v~~~~sGse 99 (389)
T PRK01278 30 GERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSN---LY----RIPEQERLAERLVENSFA---DKVFFTNSGAE 99 (389)
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCcccc---cc----CChHHHHHHHHHHhhCCC---CEEEEcCCcHH
Confidence 445677543 567889999999999876322211 01 123445788888887743 38999999999
Q ss_pred HHHHHHHHccCCCCCCCC----EEEEcCCCCcccHHHHHHHHHHcCCEEEEE----eCCCCC----CCCHHHHHHhcccC
Q 017640 141 AINLVAYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFL----NLNDDE----SPDLDKLKEMLSRK 208 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v----~~~~~~----~~d~~~l~~~l~~~ 208 (368)
|+..+++.++.....+|| +|++.++.||+........ +...... +..++. ..|++.+++.++++
T Consensus 100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 175 (389)
T PRK01278 100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAA----GGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPN 175 (389)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhc----cCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCC
Confidence 999998876322234555 8999999999876544332 2111111 111121 14899999999889
Q ss_pred ceEEEEccccccccc-ccC---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCCc--c
Q 017640 209 TKLVVIHHISNMLAS-ILP---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPTG--I 277 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~-~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~G--~ 277 (368)
+++|+++.+++++|. .+| +++|.++|++||+++|+|++|. ++.. ..+.....+|+ .+++|.++ +| +
T Consensus 176 ~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~t~sK~l~-~G~~i 252 (389)
T PRK01278 176 TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI--MAVAKGIG-GGFPL 252 (389)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCE--EEEehhcc-CCcce
Confidence 999999999999994 444 8999999999999999999988 3221 11122334665 46779877 34 8
Q ss_pred eEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 017640 278 GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSI 357 (368)
Q Consensus 278 G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~ 357 (368)
|++++++++++.+.....+. ..+.+....+++.++++.+++. .+.++.+++.+++.
T Consensus 253 g~~~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~ 308 (389)
T PRK01278 253 GACLATEEAAKGMTPGTHGS---------------------TYGGNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLK 308 (389)
T ss_pred EEEEEcHHHHhccCCCCCCC---------------------CCCccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHH
Confidence 99999998877665432211 1145666777777888877553 23344555555555
Q ss_pred HHHHh
Q 017640 358 IVIQE 362 (368)
Q Consensus 358 ~~l~~ 362 (368)
+.+++
T Consensus 309 ~~l~~ 313 (389)
T PRK01278 309 QKLEG 313 (389)
T ss_pred HHHHH
Confidence 54443
No 257
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.82 E-value=2.9e-18 Score=163.88 Aligned_cols=247 Identities=13% Similarity=0.176 Sum_probs=172.2
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCC---
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS--- 152 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~--- 152 (368)
.|...+.+.+++.+.++.+.... ... ..+...++.+.++++++.+ .+++++|+++|+..++..+...
T Consensus 55 ~Gh~~~~i~~a~~~~~~~~~~~~---~~~----~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~al~~a~~~~~~ 124 (401)
T PRK00854 55 QGHCHPKILAAMVEQAGRLTLTS---RAF----RNDQLAPLYEELAALTGSH---KVLPMNSGAEAVETAIKAVRKWGYE 124 (401)
T ss_pred CCCCCHHHHHHHHHHHhhccccc---ccc----CCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHHHHHh
Confidence 44568999999999988753211 101 1345667999999998853 7899999999999999887321
Q ss_pred --CCCCC-CEEEEcCCCCcccHHHHHHHHH---------HcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccc
Q 017640 153 --NLKSG-DEVILTVAEHHSAIVPWQLVAQ---------KTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 153 --~~~~g-d~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
...+| ++|++.+..|++.......+.. .....+..++.. |++.|++++.+++++|++++++||
T Consensus 125 ~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~~aii~e~~~~~ 199 (401)
T PRK00854 125 VKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFG-----DAEALEAAITPNTVAFLVEPIQGE 199 (401)
T ss_pred ccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHhCCCeEEEEEccccCC
Confidence 11223 6888888888875433322110 001233444433 899999999889999999999999
Q ss_pred cccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc--c--cCCCCCccEEEecCcCcCCCCc--ceEEEEccccccc
Q 017640 221 LASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSA 289 (368)
Q Consensus 221 tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--~--~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~ 289 (368)
+|.+.| +++|.++|++||+++|+|++|+ +|... + +.....+|+++.| |.++... +|++++++++++.
T Consensus 200 ~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~ 277 (401)
T PRK00854 200 AGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGV 277 (401)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhc
Confidence 999998 9999999999999999999998 55432 1 1222357888764 9765433 8999999998877
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+...+. .+ ..+....+++.++++.+.+.+ +.++.+++.+++.+.|++.
T Consensus 278 l~~~~~~~------------------t~---~~~~~~~aa~~a~L~~l~~~~---~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 278 LKPGQHGS------------------TF---GGNPLACAVARAALKVLTEEG---MIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred ccCCCCCC------------------CC---CcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhh
Confidence 65432111 11 246667777888888776532 4577777888888877764
No 258
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.82 E-value=3e-18 Score=163.39 Aligned_cols=257 Identities=15% Similarity=0.167 Sum_probs=176.2
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..|.+.+++.+.++.+..... . . ..+...++.++++++.+. +.++|+++++
T Consensus 38 ~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~--~----~~~~~~~l~~~l~~~~~~---~~~~~~~SGs 107 (396)
T PRK04073 38 EGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSR-A--F----HSDQLGPWYEKVAKLTGK---DMVLPMNTGA 107 (396)
T ss_pred CCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhcccccc-c--c----CCHHHHHHHHHHHhcCCC---CeEEEcCChH
Confidence 344677763 3567899999999999886532111 1 1 123445788888888764 3889999999
Q ss_pred HHHHHHHHHccCC-----CC-CCCCEEEEcCCCCcccHHHHHHHHHHcCC---------EEEEEeCCCCCCCCHHHHHHh
Q 017640 140 EAINLVAYSWGLS-----NL-KSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~-----~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---------~v~~v~~~~~~~~d~~~l~~~ 204 (368)
+|+..++...... .. ..+++|+..+..||+.......+....+. .+..++.+ |++.+++.
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~ 182 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG-----DLEALKAA 182 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC-----CHHHHHHh
Confidence 9999999876321 01 23367888888888765433332211000 12233332 78999999
Q ss_pred cccCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC
Q 017640 205 LSRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT 275 (368)
Q Consensus 205 l~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~ 275 (368)
+++++++|+++.++||+|.+.| +++|.++|++||+++|+|++|. +|.. ..+.....+|+++. +|.+|.+
T Consensus 183 i~~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~--sK~lg~g 260 (396)
T PRK04073 183 ITPNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYIL--GKALGGG 260 (396)
T ss_pred cccCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEEe--cccccCC
Confidence 9888999999999999999988 8899999999999999999988 4321 12333345787764 6988876
Q ss_pred c--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 276 G--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 276 G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
| +|++++++++++.+.+...+. .+ +.+....+++.++++.+.+. .+.++..++.
T Consensus 261 g~~ig~~~~~~~i~~~~~~~~~~~------------------t~---~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~ 316 (396)
T PRK04073 261 VFPISCVAANRDILGVFTPGSHGS------------------TF---GGNPLACAVSIAALEVLEEE---KLPERSLELG 316 (396)
T ss_pred CCcceEEEEcHHHHhhhcCCCCCC------------------CC---CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHH
Confidence 5 899999999887765322110 11 34556677777888877653 3456777778
Q ss_pred HHHHHHHHhh
Q 017640 354 ICSIIVIQER 363 (368)
Q Consensus 354 ~~l~~~l~~~ 363 (368)
+++.+.|+++
T Consensus 317 ~~l~~~L~~l 326 (396)
T PRK04073 317 EYFKEQLKEI 326 (396)
T ss_pred HHHHHHHHhh
Confidence 8888888764
No 259
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.82 E-value=2.8e-18 Score=162.74 Aligned_cols=226 Identities=14% Similarity=0.128 Sum_probs=159.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH-HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNAT-EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t-~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 187 (368)
...+.+.+++.+++++|.+.....++++|+| .++.+++.+++.. -.+||+|+++...|.++..+ +...|+++++
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-~~~gd~VI~p~~th~S~~kA----i~~~G~~pv~ 177 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-RPKAKYVIWPRIDQKSCIKA----ISTAGFEPRV 177 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-CCCCCEEEEECcChHHHHHH----HHHcCCeEEE
Confidence 3566778999999999998544678889999 6888888776310 11589999999988886544 4556999999
Q ss_pred EeC--C-CCCCCCHHHHHHhccc---CceEEEEccc-ccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-cC--C
Q 017640 188 LNL--N-DDESPDLDKLKEMLSR---KTKLVVIHHI-SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DV--Q 257 (368)
Q Consensus 188 v~~--~-~~~~~d~~~l~~~l~~---~~~~v~~~~~-~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~--~ 257 (368)
++. + +++.+|+++|+++|++ +..++++..+ ++.+|...|+++|+++|++||+++|+|++|+.+.... .. .
T Consensus 178 Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~ 257 (444)
T TIGR03531 178 IETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINK 257 (444)
T ss_pred eeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhc
Confidence 995 3 4588999999999986 3445444444 3455678899999999999999999999999755321 11 1
Q ss_pred --CC-CccEEEecCcCcCCC-CcceEEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 258 --GL-DADFLVASSHKMCGP-TGIGFLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 258 --~~-~~d~~~~s~~K~~g~-~G~G~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
.. ..|+++.|+||++.. .++|++++ ++++++.+.....+ + ..+...+.+...
T Consensus 258 g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g-------------------~----~~~s~~~~~~~~ 314 (444)
T TIGR03531 258 AIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPG-------------------R----ASASPSLDVLIT 314 (444)
T ss_pred cccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccC-------------------C----CCChHHHHHHHH
Confidence 12 369999999997764 44777777 45666655533221 1 111222333333
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 333 AIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 333 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++ .+...+++.+.++..++++++.+.|.++
T Consensus 315 ll-~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 315 LL-SLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred HH-HhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3333478888888999999999988765
No 260
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.82 E-value=4.5e-19 Score=159.24 Aligned_cols=238 Identities=18% Similarity=0.172 Sum_probs=161.6
Q ss_pred CCCccchhhhhc-CCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCC--CCc-chhhHHHHHHHHHH
Q 017640 41 STDSVSLGHITR-PDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVH--RGI-HFLSAKATDEYELA 116 (368)
Q Consensus 41 ~~~~~~~~~~~r-~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~ 116 (368)
.+.+..|.-+.+ +.-|+... .+ ..++|.++-+.+-.+-+-+...+.+.-........ ... ....+.-.+.+..+
T Consensus 49 ~e~S~yf~g~~~y~~npy~~~-~N-p~GiIQmGlaENqlc~DL~~~wl~k~~~~~~~~~eg~~~f~~la~fqdy~Gl~~f 126 (471)
T KOG0256|consen 49 GEDSSYFYGWKAYEKNPYDPI-KN-PLGIIQMGLAENQLCFDLIESWLSKNPEASNCTREGQSSFDELAMFQDYHGLPSF 126 (471)
T ss_pred cccchHHHHHHhcccCCCCCC-CC-chHHHHhhhhhhHHHHHHHHHHHHhChhhhhcccccccchhhHhhcccccCchHH
Confidence 334455666655 33334332 22 26788888877665544444444431111100000 000 00011112345578
Q ss_pred HHHHHHHcCC----C---CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 117 RKKVAAFINA----S---DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 117 r~~la~~~~~----~---~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
|+++|+++.. + +++.+++++|+|.+++.++..+ .+|||..+++.|.|++.... +.=+.|.++++|.
T Consensus 127 rqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcL----adpgdafLvPtPyY~gfdrd---l~~rTgveivpv~ 199 (471)
T KOG0256|consen 127 RQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCL----ADPGDAFLVPTPYYPGFDRD---LRWRTGVEIVPVH 199 (471)
T ss_pred HHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHh----cCCCceeeecCCCCCccccc---ceeccCceEEEEE
Confidence 8888887742 1 3459999999999999999887 89999999999999996533 3335689999998
Q ss_pred CCC--CCCCCHHHHHHhccc------CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc-----
Q 017640 190 LND--DESPDLDKLKEMLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV----- 253 (368)
Q Consensus 190 ~~~--~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~----- 253 (368)
+.. ++++++++||+++.+ +.+.|++++|+||.|.+++ +..+..+|.++++++|+||+|+.....
T Consensus 200 c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~ 279 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFR 279 (471)
T ss_pred eecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCce
Confidence 873 478999999998854 5799999999999999999 566777788999999999999854321
Q ss_pred -c-c----CC-CCCccEEEecCcCcCCCCc--ceEEEEccccc
Q 017640 254 -V-D----VQ-GLDADFLVASSHKMCGPTG--IGFLFGKSDLL 287 (368)
Q Consensus 254 -~-~----~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li 287 (368)
+ + .+ ..+...++.|+||-||.+| .|+++..++-+
T Consensus 280 Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~V 322 (471)
T KOG0256|consen 280 SVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDV 322 (471)
T ss_pred EHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHH
Confidence 0 1 11 2345678999999999999 99999876543
No 261
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.81 E-value=3.3e-18 Score=162.35 Aligned_cols=246 Identities=17% Similarity=0.145 Sum_probs=168.0
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.|+.++.+.+++.+.+........ . ...+...++++.+++++|.+ ++++++|+++++..+++.++. ...
T Consensus 41 lG~~~p~v~~a~~~~~~~~~~~~~--~-----~~~~~~~~l~~~la~~~g~~---~~~~~~sg~~a~~~a~~~~~~-~~~ 109 (379)
T TIGR00707 41 LGHAHPKLVEALKEQLEKLVHVSN--L-----YYTEPQEELAEKLVEHSGAD---RVFFCNSGAEANEAALKLARK-YTG 109 (379)
T ss_pred CCCCCHHHHHHHHHHHhhcccccc--c-----cCCHHHHHHHHHHHhhCCCC---EEEEeCCcHHHHHHHHHHHHH-Hhh
Confidence 446678999999998876421110 0 12355678999999999874 899999999999999886521 012
Q ss_pred ----CCCEEEEcCCCCcccHHHHHHHHHHcCCEEE----EEeCCCCCCC----CHHHHHHhcccCceEEEEccccccccc
Q 017640 156 ----SGDEVILTVAEHHSAIVPWQLVAQKTGANLK----FLNLNDDESP----DLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 156 ----~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~----~v~~~~~~~~----d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
+|++|++.++.|++........ +.... ..+...+... |++.+++.+++++++|+++++++++|.
T Consensus 110 ~~~~~~~~vi~~~~~yh~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~ 185 (379)
T TIGR00707 110 DKGKEKKKIIAFENSFHGRTMGALSA----TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGV 185 (379)
T ss_pred ccCCCCCeEEEECCCcCCccHHHHHh----cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCC
Confidence 3799999999988754332222 22111 1222222111 899999999888999999888888886
Q ss_pred c-cC---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCC
Q 017640 224 I-LP---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 224 ~-~~---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~ 292 (368)
. .+ +++|.++|++||+++++|++|+ ++.. +.+.....+|++ +++|.++ +| +|++++++++++.+.+
T Consensus 186 ~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~G~riG~~~~~~~~~~~~~~ 262 (379)
T TIGR00707 186 NPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLG-GGVPIGATLAKEEVAEAFTP 262 (379)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEccccc-CCcccEEEEEcHHHHhhhcC
Confidence 5 34 7899999999999999999987 3321 111222345655 5789888 45 9999999998887765
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...+ ..+ +.+...+.++.++++.+.. ..+.++.+++.+++.+.+.+.
T Consensus 263 ~~~~------------------~~~---~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~ 309 (379)
T TIGR00707 263 GDHG------------------STF---GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL 309 (379)
T ss_pred CCCC------------------CCC---CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH
Confidence 3211 011 3566778888888887654 345677777777777777654
No 262
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.81 E-value=1.7e-18 Score=164.63 Aligned_cols=219 Identities=16% Similarity=0.091 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC
Q 017640 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 192 (368)
..++++++++++|.+ .+++|+|+++|+..++.++ ++|||+| ++++.|.+. .......|++++.+++++
T Consensus 55 ~~~Leeaia~~~g~~---~vv~t~~Gt~Al~la~~al----~~pGD~V-~~~~~f~~~----~~~i~~~Ga~pv~v~i~~ 122 (431)
T cd00617 55 FYDLEDAVQDLFGFK---HIIPTHQGRGAENILFSIL----LKPGRTV-PSNMHFDTT----RGHIEANGAVPVDLVIDE 122 (431)
T ss_pred HHHHHHHHHHHHCCC---eEEEcCCHHHHHHHHHHHh----CCCCCEE-ccCCcccch----HHHHHhCCCEeEEEeccc
Confidence 458999999999986 7899999999999999988 8999987 577755553 334556799999999873
Q ss_pred C----------CCCCHHHHHHhcccC----ceEEEEccccccc-ccccC---HHHHHHHHHhcCCEEEEecCCcCC----
Q 017640 193 D----------ESPDLDKLKEMLSRK----TKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSVP---- 250 (368)
Q Consensus 193 ~----------~~~d~~~l~~~l~~~----~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~~---- 250 (368)
. |.+|++.|+++++++ +++|+++.++|++ |..++ +++|.++|++||++||.|+++..+
T Consensus 123 ~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~ 202 (431)
T cd00617 123 AHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYF 202 (431)
T ss_pred ccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhh
Confidence 2 459999999999865 7899999999998 89987 567899999999999999997643
Q ss_pred -------cccccCC------CCCccEEEecCcCcCCCCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCC
Q 017640 251 -------HMVVDVQ------GLDADFLVASSHKMCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSR 316 (368)
Q Consensus 251 -------~~~~~~~------~~~~d~~~~s~~K~~g~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (368)
.....+. ....|.++.|++|.++.+-.|+++.++ +++++++...... ..
T Consensus 203 i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~~~-----------------~~ 265 (431)
T cd00617 203 IKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLY-----------------EG 265 (431)
T ss_pred hhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhcccc-----------------CC
Confidence 1111111 114788999999955543248999987 5877765321100 11
Q ss_pred C-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 317 F-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 317 ~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+ ..|..+.-.+.+++.+++...+ .+.+.++.. .++++.+.|.+.
T Consensus 266 ~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~~-~r~~l~~~L~~~ 310 (431)
T cd00617 266 FVTYGGMAGRDMEALAQGLREAVE--EDYLRHRVE-QVRYLGDRLDEA 310 (431)
T ss_pred ccccccccHHHHHHHHHHHHhccc--HHHHHHHHH-HHHHHHHHHHHC
Confidence 1 1234455555566556653221 234444444 447788888765
No 263
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.81 E-value=1.4e-17 Score=163.24 Aligned_cols=276 Identities=16% Similarity=0.092 Sum_probs=195.9
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
|+.|....+.++.+...+...+ + |++...+..++....+.+++-+.+++++|.+.. ..+||+|+|+|+..++...
T Consensus 86 y~ghm~~~~~~paila~~~a~~--~--N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-~G~~TsGGT~ANl~aL~~A 160 (608)
T TIGR03811 86 YWGHMNSETLMPAILAYNYAML--W--NGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-WGHIVADGSLANLEGLWYA 160 (608)
T ss_pred eEEECcCCCCHHHHHHHHHHHH--h--CCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-CeEEeCChHHHHHHHHHHH
Confidence 7888777777777766654333 2 333345556777888999999999999999864 6789999999999988775
Q ss_pred cCCC-----CCC-------------------------------------------C------CEEEEcCCCCcccHHHHH
Q 017640 150 GLSN-----LKS-------------------------------------------G------DEVILTVAEHHSAIVPWQ 175 (368)
Q Consensus 150 ~~~~-----~~~-------------------------------------------g------d~vl~~~~~~~s~~~~~~ 175 (368)
+... ++. | -+++++...|+| +.
T Consensus 161 R~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS----~~ 236 (608)
T TIGR03811 161 RNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYS----WL 236 (608)
T ss_pred HHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHH----HH
Confidence 4211 000 0 057777777888 55
Q ss_pred HHHHHcCC---EEEEEeCCCCCCCCHHHHHHhccc------CceEEEEcccccccccccCHHHHHHHH---HhcCC--EE
Q 017640 176 LVAQKTGA---NLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWS---HDVGA--KV 241 (368)
Q Consensus 176 ~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~---~~~g~--~l 241 (368)
+.+...|. .++.||+++++.+|+++|+++|.+ .+-+|+.+..++.+|.+.|+++|+++| +++|+ ++
T Consensus 237 KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~l 316 (608)
T TIGR03811 237 KAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYL 316 (608)
T ss_pred HHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeE
Confidence 66666687 599999999999999999998864 245688889999999999999999999 67887 69
Q ss_pred EEecCCcCCc---c--------ccc-----------C----------------CCCCccEEEecCcCc-CCCCcceEEEE
Q 017640 242 LVDACQSVPH---M--------VVD-----------V----------------QGLDADFLVASSHKM-CGPTGIGFLFG 282 (368)
Q Consensus 242 i~D~a~~~~~---~--------~~~-----------~----------------~~~~~d~~~~s~~K~-~g~~G~G~l~~ 282 (368)
++|+|++... + |++ + .-..+|.++.++||+ |-|.++|.+++
T Consensus 317 HVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~ 396 (608)
T TIGR03811 317 HVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVI 396 (608)
T ss_pred eeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEE
Confidence 9999998532 1 110 0 012589999999995 66889999999
Q ss_pred ccccccc-C---CCcccCCcceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHH
Q 017640 283 KSDLLSA-M---PPFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYL--STIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 283 ~~~li~~-l---~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~--~~~g~~~i~~~~~~l~~~ 355 (368)
|+.-+.. + .++....+ .........+ ..|+.+-...+++..+++.+ ...|+.++.+++.+++++
T Consensus 397 Rd~~~~~~~~~~a~Yl~~~~---------~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~ 467 (608)
T TIGR03811 397 QDIRMRDVISYFATYVFEKG---------ADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHR 467 (608)
T ss_pred eCHHHHHHHhcCcchhcccc---------ccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 8763222 1 12221100 0000001111 24454446677778888887 666899999999999999
Q ss_pred HHHHHHhh
Q 017640 356 SIIVIQER 363 (368)
Q Consensus 356 l~~~l~~~ 363 (368)
+.+.|.+.
T Consensus 468 ~~~~L~~~ 475 (608)
T TIGR03811 468 FYDFLNNL 475 (608)
T ss_pred HHHHHHhc
Confidence 99999874
No 264
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.81 E-value=1.8e-18 Score=154.71 Aligned_cols=277 Identities=17% Similarity=0.219 Sum_probs=201.5
Q ss_pred hcCCCCcccccccC--CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC
Q 017640 51 TRPDFPILHQEVYG--SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (368)
Q Consensus 51 ~r~~f~~~~~~~~~--~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~ 127 (368)
+..+||......+. .+-.++..+...+ .-.|.|.+++++.++...+.........| ......++++.||++.+.+
T Consensus 155 lA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG--~s~~hv~LE~eLA~LHqK~ 232 (570)
T KOG1360|consen 155 LAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISG--HSKHHVRLEAELADLHQKE 232 (570)
T ss_pred hhhhccchhhccccccCceEEEecCccccccCChHHHHHHHHHHHHcCCCcCCccccCC--CCchhhhHHHHHHHHhcCc
Confidence 44677766544332 2335677776666 56899999999999987554322111111 2344457999999999987
Q ss_pred CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
. .++|+ ++--|+...+..++ ..-||-+|+-.+.+|.|....++. .++.-..+..+ |++.|++.|+.
T Consensus 233 a--ALlFs-SCfVANDstLftLa--k~lpgcei~SD~gNHASMI~GIrn----s~v~K~IFrHN-----D~~hL~~lL~~ 298 (570)
T KOG1360|consen 233 A--ALLFS-SCFVANDSTLFTLA--KKLPGCEIFSDEGNHASMIQGIRN----SRVPKHIFRHN-----DLDHLEQLLQS 298 (570)
T ss_pred c--eeeee-eeeeccchHHHHHH--HHCCCcEEeccccchHHHHHHhhh----cCCcceeeccC-----CHHHHHHHHHh
Confidence 4 44444 44456666665553 255888888888888887655543 36665566666 89999998864
Q ss_pred ----CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc--------cCCCCCccEEEecCcCcCCCC
Q 017640 208 ----KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV--------DVQGLDADFLVASSHKMCGPT 275 (368)
Q Consensus 208 ----~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~--------~~~~~~~d~~~~s~~K~~g~~ 275 (368)
.+|+|.++.+++++|.+.|++||++++++||.+.++||+|+.|..-. |--....|++++++.|.||--
T Consensus 299 ~~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcV 378 (570)
T KOG1360|consen 299 SPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCV 378 (570)
T ss_pred CCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhcccc
Confidence 57999999999999999999999999999999999999999765411 111135899999999999987
Q ss_pred cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 276 GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 276 G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
| |++....++++.++.+..|.- | ..+.+..-+.++..++++++...-..++...++...|
T Consensus 379 G-GYIAat~~LvDmiRSyAaGFI------------------F-TTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~ 438 (570)
T KOG1360|consen 379 G-GYIAATRKLVDMIRSYAAGFI------------------F-TTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKY 438 (570)
T ss_pred c-ceehhhhhHHHHHHHhcCceE------------------E-ecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 6 999999999999998876532 2 2255556677888889988876456777777778888
Q ss_pred HHHHHHhh
Q 017640 356 SIIVIQER 363 (368)
Q Consensus 356 l~~~l~~~ 363 (368)
+++.|.++
T Consensus 439 ~kq~l~~~ 446 (570)
T KOG1360|consen 439 VKQLLMEL 446 (570)
T ss_pred HHHHHHHc
Confidence 88888765
No 265
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.80 E-value=4.3e-18 Score=171.21 Aligned_cols=245 Identities=16% Similarity=0.131 Sum_probs=173.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-CHHHHHHHHHHHccCCCC----CCCCEEEEcCCCCcccHHHHHHHH
Q 017640 104 FLSAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVA 178 (368)
Q Consensus 104 ~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~-g~t~a~~~~~~~~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~ 178 (368)
..+.+..+.+.++++.+++++|.+ .+.+.+ +++.+...++++++.++. ..+++|+++...|+++... +
T Consensus 536 e~sQG~lq~i~elq~~l~eLtGmd---~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas----a 608 (954)
T PRK12566 536 EQAEGYRAMIDELEAWLCAITGFD---AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS----A 608 (954)
T ss_pred hhhcCHHHHHHHHHHHHHHHHCCC---eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH----H
Confidence 345667899999999999999997 345554 555566566665532122 2346889999999887533 4
Q ss_pred HHcCCEEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc
Q 017640 179 QKTGANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD 255 (368)
Q Consensus 179 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~ 255 (368)
...|.+++.++.+++|.+|+++|+++++ +++++|+++++++..+...|+++|+++||++|+++++|+++..+...++
T Consensus 609 ~~~GieVv~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~ 688 (954)
T PRK12566 609 QMAGMRVVIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLA 688 (954)
T ss_pred HHCCCEEEEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCC
Confidence 5669999999999899999999999997 5788899999988877777799999999999999999999998777775
Q ss_pred -CCCCCccEEEecCcCcCC-CCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCC---CHHHHHH
Q 017640 256 -VQGLDADFLVASSHKMCG-PTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTP---AIGEAIG 329 (368)
Q Consensus 256 -~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~---~~~~~~a 329 (368)
..++++|++++++||+|+ |.|.|...+.+ ...+.+.|+..++..+.. +. ...+ .|+. ++.+...
T Consensus 689 ~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~---~G-----~~~r--~ga~S~~~~gsa~~ 758 (954)
T PRK12566 689 RPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPV---EG-----PDPN--NGAVSAAPWGSASI 758 (954)
T ss_pred ChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCC---CC-----CCCC--CCceeecccchHHH
Confidence 467899999999999664 55655544444 444444455444321100 00 0001 2333 3333333
Q ss_pred HHHHHHHHHHhCHHHHHHH--HHHHHHHHHHHHHhhcC
Q 017640 330 LGAAIDYLSTIGMQKIHAY--EVKWIICSIIVIQERHN 365 (368)
Q Consensus 330 ~~~al~~~~~~g~~~i~~~--~~~l~~~l~~~l~~~~g 365 (368)
+..++.++...|.+..+.. ...+++|+.++|.+..+
T Consensus 759 l~~A~~Yi~~lG~eLk~aa~~ailnAnYla~rL~~~~~ 796 (954)
T PRK12566 759 LPISWMYIAMMGPQLADASEVAILSANYLANQLGGAFP 796 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHhHhhCC
Confidence 6677778888787633333 36799999999987543
No 266
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.7e-18 Score=154.81 Aligned_cols=258 Identities=13% Similarity=0.079 Sum_probs=182.8
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
+|.......+.+.+.+++.+.-. .....|+..+...++++.+++++|.. .++|++++|+++.+++.+.
T Consensus 3 ~f~SDn~~g~~~~m~eam~~a~~---------~~~~~YG~D~~~~~~e~~~ae~~g~~---a~~Fv~sGT~aN~lal~~~ 70 (342)
T COG2008 3 DFRSDNVAGPTPEMREALAAANA---------VGDDVYGEDPTTNALEQRIAELFGKE---AALFVPSGTQANQLALAAH 70 (342)
T ss_pred ccccCccCCCCHHHHHHHHhccc---------cCCCCCCCCHHHHHHHHHHHHHhCCc---eEEEecCccHHHHHHHHHh
Confidence 45555566778888888876632 11223445677889999999999993 8999999999999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccccccccc
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLAS 223 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~ 223 (368)
++||+.|++....|-.....-. ..-..++....+...++|.++++++++.+.+ .+..+++.+.+|..|.
T Consensus 71 ----~~~~~~vi~~~~aHi~~~E~Ga-~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt 145 (342)
T COG2008 71 ----CQPGESVICHETAHIYTDECGA-PEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT 145 (342)
T ss_pred ----cCCCCeEEEeccccceecccCc-HHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCce
Confidence 8999999999998887654322 1122344454555457899999999998864 2466666666678899
Q ss_pred ccC---HHHHHHHHHhcCCEEEEecCCcC---CcccccCC--CCCccEEEecCcCcCCCCcceEEEEcccccccCCCc--
Q 017640 224 ILP---IEEIVHWSHDVGAKVLVDACQSV---PHMVVDVQ--GLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPF-- 293 (368)
Q Consensus 224 ~~~---l~~i~~l~~~~g~~li~D~a~~~---~~~~~~~~--~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~-- 293 (368)
++| +++|.++||+||+.|++|++--. -....+.. ..++|.++.+++|..+.++.++++.+.+++++.+.+
T Consensus 146 Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK 225 (342)
T COG2008 146 VYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRK 225 (342)
T ss_pred ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHH
Confidence 999 66888899999999999999321 11111221 237999999999988888779999999998876532
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL 368 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t~ 368 (368)
..|++.. -..++ .+..+-++++.-......|.+++++++.+.+.+.+|.++
T Consensus 226 ~~Ggl~~-----------------------k~r~l-aA~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~ 276 (342)
T COG2008 226 RAGGLMR-----------------------KARFL-AAQGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKL 276 (342)
T ss_pred HhcccHh-----------------------hhhHH-HHHHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCcee
Confidence 2333221 11112 122233334323566778888999999999998888653
No 267
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.79 E-value=1.7e-17 Score=159.04 Aligned_cols=164 Identities=21% Similarity=0.257 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccC-----CCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE
Q 017640 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGL-----SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~-----~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 187 (368)
..++++.+++++|.+ .+++++|+|+|+..++.++.. ..+++||+|++++++|.++...+. ..|++++.
T Consensus 65 ~~~fe~~lA~~~g~~---~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~----~~G~~pv~ 137 (438)
T PRK15407 65 NDAFEKKLAEFLGVR---YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPII----QNGLVPVF 137 (438)
T ss_pred HHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHH----HcCCEEEE
Confidence 558999999999985 688999999999999987521 136899999999999988665443 45999999
Q ss_pred EeCC-CCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc--CCCCCccEE
Q 017640 188 LNLN-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--VQGLDADFL 264 (368)
Q Consensus 188 v~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~--~~~~~~d~~ 264 (368)
++++ .++.+|++.+++++++++++|+++++ +|...++++|.++|++||++||+|++|+.|...-+ ...++ |+.
T Consensus 138 vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~g-d~~ 213 (438)
T PRK15407 138 VDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFG-DIA 213 (438)
T ss_pred EecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccC-ceE
Confidence 9987 46889999999999999999999985 78888999999999999999999999999876322 22233 788
Q ss_pred EecCcC--cCC-CCcceEEEEcccccc
Q 017640 265 VASSHK--MCG-PTGIGFLFGKSDLLS 288 (368)
Q Consensus 265 ~~s~~K--~~g-~~G~G~l~~~~~li~ 288 (368)
++|++. .+. +. .|+++++++.+.
T Consensus 214 ~fSf~~~k~~~~ge-GG~l~t~d~~l~ 239 (438)
T PRK15407 214 TLSFYPAHHITMGE-GGAVFTNDPLLK 239 (438)
T ss_pred EEeCCCCCCccccC-ceEEEECCHHHH
Confidence 888764 343 44 499998876543
No 268
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.79 E-value=3.9e-17 Score=156.07 Aligned_cols=255 Identities=13% Similarity=0.152 Sum_probs=170.0
Q ss_pred eEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
-.|+|..+ .|..+|.+.+++.+.+..+... +... ..+....+++.++++++.+ .++|++++++|
T Consensus 31 ~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~---~~~~----~~~~~~~~~~~l~~~~~~~---~~~~~~SGs~A 100 (400)
T PTZ00125 31 KKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLT---SRAF----YNDVLGLAEKYITDLFGYD---KVLPMNSGAEA 100 (400)
T ss_pred CEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccc---cccc----cCHHHHHHHHHHHhCCCCC---EEEEeCCcHHH
Confidence 34666642 4457999999999988764211 1111 1346678888899888753 78999999999
Q ss_pred HHHHHHHccCCC-----C-CCCCEEEEcCCCCcccHHHHHHHHHHcCC---------EEEEEeCCCCCCCCHHHHHHhcc
Q 017640 142 INLVAYSWGLSN-----L-KSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEMLS 206 (368)
Q Consensus 142 ~~~~~~~~~~~~-----~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---------~v~~v~~~~~~~~d~~~l~~~l~ 206 (368)
+..++....... . ..++.|+..+..|++.............. .+..++. .|+++|++.++
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~ 175 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY-----NDVEALEKLLQ 175 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC-----CCHHHHHHHhC
Confidence 999998762100 1 23578888888888765433322110000 1122222 28999999996
Q ss_pred -cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC-
Q 017640 207 -RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT- 275 (368)
Q Consensus 207 -~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~- 275 (368)
+++++|+++.++|++|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|++++ +|.+++.
T Consensus 176 ~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~~~~--sK~l~~g~ 253 (400)
T PTZ00125 176 DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVLL--GKALSGGL 253 (400)
T ss_pred CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCEEEE--cccccCCC
Confidence 67899999999999999998 9999999999999999999986 4321 22223345787765 5976643
Q ss_pred -cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 017640 276 -GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWII 354 (368)
Q Consensus 276 -G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~ 354 (368)
++|++++++++++.+.+...+. .+ ..+.....++.++++.+.+.+ +.++.+++.+
T Consensus 254 ~~ig~v~~~~~~~~~~~~~~~~~------------------t~---~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~ 309 (400)
T PTZ00125 254 YPISAVLANDDVMLVIKPGEHGS------------------TY---GGNPLACAVAVEALEVLKEEK---LAENAQRLGE 309 (400)
T ss_pred cCcEEEEEcHHHHhhccCCCCCC------------------CC---CcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 4899999999888766432110 11 234456666777788877644 3455566666
Q ss_pred HHHHHHHhh
Q 017640 355 CSIIVIQER 363 (368)
Q Consensus 355 ~l~~~l~~~ 363 (368)
++.+.|.+.
T Consensus 310 ~l~~~l~~l 318 (400)
T PTZ00125 310 VFRDGLKEL 318 (400)
T ss_pred HHHHHHHHH
Confidence 666666553
No 269
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=3.6e-17 Score=149.23 Aligned_cols=258 Identities=16% Similarity=0.154 Sum_probs=181.2
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|||.. ..|+.+|.+.+++++..+.+...++. + ..+...++.+.|++..+ .. +.|+|+||++
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~---~----~~~~~~~la~~L~~~s~-~~-d~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNL---F----YNEPQAELAEKLVELSP-FA-DRVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccc---c----CChHHHHHHHHHHhhCc-cc-cEEEEcCCcH
Confidence 455677753 36689999999999988876443321 1 13445578888888887 33 4999999999
Q ss_pred HHHHHHHHHccCCCC-CCCCEEEEcCCCCcccHHHHHHHH------HHcC---CEEEEEeCCCCCCCCHHHHHHhcccCc
Q 017640 140 EAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVA------QKTG---ANLKFLNLNDDESPDLDKLKEMLSRKT 209 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~------~~~g---~~v~~v~~~~~~~~d~~~l~~~l~~~~ 209 (368)
||++.++...+++.. ..+.+|+....+||+-......+. +..+ -.++.+|.+ |+++++++++++|
T Consensus 111 EA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-----Di~al~~ai~~~t 185 (404)
T COG4992 111 EANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-----DIEALEAAIDEDT 185 (404)
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-----CHHHHHHHhccCe
Confidence 999999998754333 224589988998887432211110 0001 123444444 9999999999999
Q ss_pred eEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCC-CCcceE
Q 017640 210 KLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCG-PTGIGF 279 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g-~~G~G~ 279 (368)
.+|+++.++...|++.| ++++.++|++||+++|+||+|. +|.. ..+.....+|+++.. |.+| +-.+|.
T Consensus 186 aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~tla--K~LgGG~PigA 263 (404)
T COG4992 186 AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILTLA--KALGGGFPIGA 263 (404)
T ss_pred EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEEee--ccccCCcccee
Confidence 99999999999999988 8999999999999999999997 3332 222334568988877 9554 334899
Q ss_pred EEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 017640 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 280 l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 359 (368)
++.++...+.+.|-..|.++ .-|..+.++..++++.+.+ +.+-++.+++.+++.+.
T Consensus 264 ~la~~~~~~~~~~G~HgSTf---------------------GGNpLacAv~~a~l~~l~~---e~ll~~v~~~g~~~~~~ 319 (404)
T COG4992 264 MLATEEIASAFTPGDHGSTF---------------------GGNPLACAVALAVLEVLLE---EGLLENVREKGEYLLQR 319 (404)
T ss_pred eEEchhhhhcCCCCcccCCC---------------------CcCHHHHHHHHHHHHHHcc---hhHHHHHHHHHHHHHHH
Confidence 99986655666666654332 4566666777777887776 44556667777777777
Q ss_pred HHhh
Q 017640 360 IQER 363 (368)
Q Consensus 360 l~~~ 363 (368)
|.++
T Consensus 320 L~~l 323 (404)
T COG4992 320 LREL 323 (404)
T ss_pred HHHH
Confidence 6654
No 270
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.79 E-value=2.8e-17 Score=156.93 Aligned_cols=246 Identities=15% Similarity=0.130 Sum_probs=159.8
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCC--
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL-- 154 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~-- 154 (368)
++..+.+.+++.+.+........ . ...+...++.+.++++.+. +++++++|+++|+..+++.+....-
T Consensus 54 G~~~p~v~~a~~~~~~~~~~~~~--~-----~~~~~~~~la~~l~~~~~~---~~v~~~~gg~eA~~~al~~a~~~~~~~ 123 (396)
T PRK02627 54 GHCHPKLVEAIQEQAAKLIHTSN--L-----YYIEPQEELAEKLVELSGM---DKVFFCNSGAEANEAAIKLARKYGHKK 123 (396)
T ss_pred CCCCHHHHHHHHHHHhhcccccc--c-----cCCHHHHHHHHHHHhhcCC---CEEEECCCcHHHHHHHHHHHHHHhccc
Confidence 45568999999988875421110 0 1145556788888888765 3899999999999999996521000
Q ss_pred -CCCCEEEEcCCCCcccHHHHHHHHHHcCCEE---EEEeCCCCC----CCCHHHHHHhcccCceEEEEccccccccc-cc
Q 017640 155 -KSGDEVILTVAEHHSAIVPWQLVAQKTGANL---KFLNLNDDE----SPDLDKLKEMLSRKTKLVVIHHISNMLAS-IL 225 (368)
Q Consensus 155 -~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v---~~v~~~~~~----~~d~~~l~~~l~~~~~~v~~~~~~n~tG~-~~ 225 (368)
.+.++|++..+.|++........ .+... ...+..++. ..|++++++++.+++++|+++.++|++|. .+
T Consensus 124 ~~~~~~ii~~~~~yhg~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~ 200 (396)
T PRK02627 124 GIEKPEIITAENSFHGRTLATLSA---TGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPA 200 (396)
T ss_pred CCCCCeEEEECCCcCcccHHHHHh---cCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccC
Confidence 11268999999988754332222 12111 111211111 12899999999888999999999999994 54
Q ss_pred C---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCccc
Q 017640 226 P---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 226 ~---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~ 295 (368)
| +++|.++|++||+++|+|++|+ ++.. ..+.....+|++ +++|.++ +| +|++++++++++.+.+...
T Consensus 201 ~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~~~-~G~rig~~~~~~~~~~~~~~~~~ 277 (396)
T PRK02627 201 DKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIM--TLAKGLG-GGVPIGAVLAKEKVADVFTPGDH 277 (396)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEE--EEcchhh-CCcccEEEEEcHHHHhccCCCCC
Confidence 4 8999999999999999999987 4321 112222346655 5779888 45 9999999988776654221
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
. ...+.+....+++.++++.+... .+.++.+++.+++.+.+.+
T Consensus 278 ~---------------------~t~~~~~~~~~aa~~~l~~~~~~---~~~~~~~~~~~~~~~~l~~ 320 (396)
T PRK02627 278 G---------------------STFGGNPLACAAALAVIEIIEEE---GLLENAAEVGEYLRAKLRE 320 (396)
T ss_pred C---------------------CCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHH
Confidence 1 11145666777777778776653 3345555555555555544
No 271
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=5.8e-18 Score=159.04 Aligned_cols=215 Identities=16% Similarity=0.155 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.++++.|.+ ..+.+++++.|+.+++.++ +++||+|+++...|...+..+...+...|++++++
T Consensus 62 ~~P~~~~lE~~la~leg~~---~av~~sSG~aAi~~al~al----l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv 134 (384)
T PRK06434 62 GNPTVQAFEEKYAVLENAE---HALSFSSGMGAITSAILSL----IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI 134 (384)
T ss_pred CChhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHH----hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEE
Confidence 3566778999999999986 4577788889999999988 89999999998888888777777778889999999
Q ss_pred eCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEec
Q 017640 189 NLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVAS 267 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s 267 (368)
++++... ++ +++ ++++|++++++|||+.+.|+++|+++|++++ +++|++++.+...-.+ ..+.|++++|
T Consensus 135 d~~~~~~-----~~--l~~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s~~~~~pl-~~gaDivv~S 204 (384)
T PRK06434 135 DTDRLNS-----LD--FDPSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYNQNPL-DLGADVVIHS 204 (384)
T ss_pred CCCChhh-----ee--ecCCCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCCcccCCch-hcCCCEEEee
Confidence 9863222 22 333 6899999999999999999999999999998 5679998766541122 3579999999
Q ss_pred CcCcCCCCc---ceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 268 SHKMCGPTG---IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 268 ~~K~~g~~G---~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
.+|+++.+| .|+++.++ ++.++++......+. ..+. ..+...+.-++ -++
T Consensus 205 ~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~---------------------~~~~---~~A~l~~~gL~--tL~ 258 (384)
T PRK06434 205 ATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGS---------------------NPDP---IQAYLALRGLK--TLG 258 (384)
T ss_pred cccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCC---------------------CCCH---HHHHHHHhCCC--cHH
Confidence 999886544 67777754 443444322110000 1111 11111222222 256
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC
Q 017640 344 KIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
...++..+++..+.++|++++.+
T Consensus 259 ~R~~r~~~~a~~~a~~L~~~p~v 281 (384)
T PRK06434 259 LRMEKHNKNGMELARFLRDSKKI 281 (384)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCc
Confidence 66777888899999999988764
No 272
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.77 E-value=8.7e-17 Score=162.82 Aligned_cols=282 Identities=16% Similarity=0.111 Sum_probs=209.8
Q ss_pred EEeccCCCC-CCcHHHHHHHHHH---HHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 69 VYLDNAATS-QKPIAVLKALQNY---YEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 69 i~l~~~~~~-~~~~~v~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.|++.+.+. ..|+.+.+.+.+. +..+ .|+ +...+++..+.+-+++..++++.|.+.. +..+..++|++.+.
T Consensus 67 ~fig~G~y~~~~p~~i~r~v~~~p~~~Tay--tPy--Q~EisQG~Le~l~e~Qt~i~eLtGm~~a-NaSl~d~atA~aEa 141 (939)
T TIGR00461 67 SYIGMGYYGTILPPVIQRNLLENPGWYTAY--TPY--QPEISQGRLEALLNFQTVVSDLTGLPVA-NASLLDEGTAAAEA 141 (939)
T ss_pred ccCCCCcCCCcCChHHHHHHHhCchhhhcC--CCC--ChhhhhHHHHHHHHHHHHHHHHHCCChh-hhhccchhhHHHHH
Confidence 477777777 4566666465543 3333 233 2236777889999999999999999865 67888899988888
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++++.+. .-+++++|++++..|+.+...++..++..|.+++.++ +++|++.+ ++.++++.+| |.+|.+
T Consensus 142 ~~~a~~~-~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~~--~~~~v~~q~P-n~~G~i 209 (939)
T TIGR00461 142 MALSFNV-SKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKAV--DVFGCLLQYP-ATDGSI 209 (939)
T ss_pred HHHHHHh-hcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhcC--CEEEEEEECC-CCCeEE
Confidence 8877621 1123589999999999998888888888899998874 45676666 5677777777 568999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-----CCCCcceEEEEcccccccCCCcccCCcc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-----~g~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
.++++|++++|++|.+++++.-........+..+++.|+++++.+++ ||+++.|++.+++++.+.+...+.|+..
T Consensus 210 ed~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~ 289 (939)
T TIGR00461 210 LDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSK 289 (939)
T ss_pred ecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEe
Confidence 99999999999999999997666555554566778999999988884 4566699999999999999988887653
Q ss_pred eeec---ccCCCCCCCCCCCCCCCCCCHHHHHHHHH---H--HHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 017640 300 ISDV---FLDHSTFADPPSRFEAGTPAIGEAIGLGA---A--IDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL 368 (368)
Q Consensus 300 ~~~~---~~~~~~~~~~~~~~~~gt~~~~~~~a~~~---a--l~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t~ 368 (368)
...- +.-...-.+.+-|++-+|+|+...-++.+ + +.++...|++++.+++..++.++.+.|.+ .|+++
T Consensus 290 D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~ 365 (939)
T TIGR00461 290 DALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHEL 365 (939)
T ss_pred cCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcc
Confidence 2210 00001223456788889988876555444 4 45666678999999999999999999988 67653
No 273
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.77 E-value=2e-17 Score=153.20 Aligned_cols=165 Identities=24% Similarity=0.296 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+.+++.++.+-|.. ..+.++++..||..++.++ +++||.|++....|.+++.-+....++.|+++.+++
T Consensus 62 nPT~~~lE~~~a~LEg~~---~~~afsSGmaAI~~~~l~l----l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 62 NPTRDALEEALAELEGGE---DAFAFSSGMAAISTALLAL----LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred CccHHHHHHHHHHhhCCC---cEEEecCcHHHHHHHHHHh----cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 455668999999999876 5577788889999999888 899999999999999999999999999999999988
Q ss_pred CCCCCCCCHHHHHHhcc-cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 190 LNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
.. +.+.+++++. +++++|+++.|+||+..+.|+++|+++|+++|+++++|.+.+.+... ..-.+++|+++.|.
T Consensus 135 ~~-----~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~q-~PL~~GaDIVvhSa 208 (396)
T COG0626 135 PG-----DDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVLQ-RPLELGADIVVHSA 208 (396)
T ss_pred CC-----ChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccccccc-ChhhcCCCEEEEec
Confidence 65 6667777777 59999999999999999999999999999999999999999977652 22246899999999
Q ss_pred cCcCCCCc---ceEEEEccccc
Q 017640 269 HKMCGPTG---IGFLFGKSDLL 287 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~~~~li 287 (368)
.|.+|+.+ .|.++.+++.+
T Consensus 209 TKyl~GHsDvl~G~v~~~~~~~ 230 (396)
T COG0626 209 TKYLGGHSDVLGGVVLTPNEEL 230 (396)
T ss_pred cccccCCcceeeeEEecChHHH
Confidence 99999887 77666565443
No 274
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.77 E-value=1.5e-16 Score=151.58 Aligned_cols=255 Identities=17% Similarity=0.151 Sum_probs=169.8
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.+|.+.+++.+++..+..... + . ..+...++.+.|+++++. +.++|++++++
T Consensus 34 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~-~--~----~~~~~~~la~~L~~~~~~---~~~~f~~SGse 103 (397)
T TIGR03246 34 GKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN-G--Y----TNEPVLRLAKKLVDATFA---DKVFFCNSGAE 103 (397)
T ss_pred CCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC-c--c----CCHHHHHHHHHHHhhCCC---CEEEEeCCcHH
Confidence 334666533 567899999999999876421111 1 1 133455789999998864 38999999999
Q ss_pred HHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHHc---------CCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 141 AINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 141 a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
|+..+++..+... -..++.|+..+..||+............ ...+..++.+ |++.+++++.+
T Consensus 104 A~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~ 178 (397)
T TIGR03246 104 ANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN-----DLAAAKALISD 178 (397)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC-----CHHHHHHHhcc
Confidence 9999999753210 0134578888888887643322221100 0122334433 89999999988
Q ss_pred CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCCc--
Q 017640 208 KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~G-- 276 (368)
++++|+++.++++.|...| +++|.++|++||+++|+||+|. +|.. ........+|++ +++|.+|. |
T Consensus 179 ~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lgg-G~p 255 (397)
T TIGR03246 179 KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDIL--TSAKALGG-GFP 255 (397)
T ss_pred CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEE--EeehhhhC-Ccc
Confidence 8999999988888887653 8999999999999999999984 2211 111122357776 56797762 4
Q ss_pred ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
+|++++++++++.+.....+ ..| +.+....+++.++++.+.+ +.+.++.+++.+++
T Consensus 256 igav~~~~~i~~~~~~~~~~------------------~t~---~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l 311 (397)
T TIGR03246 256 IGAMLTTTEIAAHLKVGTHG------------------TTY---GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLF 311 (397)
T ss_pred eeEEEEcHHHHHhccCCCcC------------------CCC---CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHH
Confidence 89999999987776533211 111 3455667777788887654 44677788888888
Q ss_pred HHHHHhh
Q 017640 357 IIVIQER 363 (368)
Q Consensus 357 ~~~l~~~ 363 (368)
.+.|+++
T Consensus 312 ~~~L~~l 318 (397)
T TIGR03246 312 VDGLEKI 318 (397)
T ss_pred HHHHHHH
Confidence 8877764
No 275
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.77 E-value=3.5e-17 Score=147.27 Aligned_cols=265 Identities=16% Similarity=0.188 Sum_probs=192.5
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHH-HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAK-ATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.|.|=... ...++.|.+++...+..-+ +.|.. .++.|-. ..+......++..++||++-. +|...+| +.|+..
T Consensus 28 ~ieLIASE-N~~S~aV~~A~gS~ltnKYAEGyPgk-RyYgGce~VD~vE~laierak~LFga~~a-nVQPhSG-s~AN~a 103 (413)
T COG0112 28 HIELIASE-NFTSPAVMEAQGSDLTNKYAEGYPGK-RYYGGCEYVDEVEELAIERAKKLFGAEYA-NVQPHSG-SQANQA 103 (413)
T ss_pred ceeeeecc-ccCCHHHHHHHhhhhhhccccCCCCc-cccCCCeeHHHHHHHHHHHHHHHhCCCcc-ccCCCCc-hHHHHH
Confidence 34444333 4578899999877776532 34443 2333333 345555688899999999854 5655555 579999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC--CEEEEEeCC-CCCCCCHHHHHHhccc-CceEEEEcccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG--ANLKFLNLN-DDESPDLDKLKEMLSR-KTKLVVIHHISNM 220 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~ 220 (368)
+..++ ++|||+|+-.+-.|.+...-... ....| .+++..+++ +++.||.+++++.... +||+|+.-....+
T Consensus 104 v~~Al----l~pGDtimgm~l~~GGHltHg~~-v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~ii~G~SaY~ 178 (413)
T COG0112 104 VYLAL----LQPGDTIMGLDLSHGGHLTHGSP-VNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLIIAGGSAYS 178 (413)
T ss_pred HHHHH----cCCCCeEecccCCCCCcccCCCC-CCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEEEECccccc
Confidence 99998 99999999888777665422101 11223 355666777 4599999999988765 8898887665544
Q ss_pred cccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcC-cCCCCcceEEEEcc-cccccCCCc
Q 017640 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHK-MCGPTGIGFLFGKS-DLLSAMPPF 293 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~-~li~~l~~~ 293 (368)
..+|++++.++|++.|+++++|.+|-.|-+ +-++. .+|++++|.|| +.||.| |++++++ ++.+++...
T Consensus 179 --r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~--~AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~a 253 (413)
T COG0112 179 --RPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLP--HADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSA 253 (413)
T ss_pred --cccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCC--ccceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhh
Confidence 578899999999999999999999986543 32222 39999999999 457776 8988886 777777754
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+.|. .|.|...-++|.+.++....+.+.+...+++.++++.+.++|.+. |++
T Consensus 254 VFPg~--------------------qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~ 306 (413)
T COG0112 254 VFPGL--------------------QGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFK 306 (413)
T ss_pred cCCcc--------------------CCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 43222 357888889999999998888888999999999999999999884 543
No 276
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.76 E-value=2.1e-17 Score=151.22 Aligned_cols=168 Identities=24% Similarity=0.297 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+....+++.++++.|+. .++..+++..|+..++..+ +..|+.|+.....|.++...+.....+.|++..++..
T Consensus 77 Pt~~~le~~iaal~ga~---~~l~fsSGmaA~~~al~~L----~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 77 PTRDVLESGIAALEGAA---HALLFSSGMAAITVALLHL----LPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred CchHHHHHHHHHHhCCc---eEEEecccHHHHHHHHHHh----cCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 33447889999999987 4677777778999999988 8999999999999999999999999999999999998
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 270 (368)
+ |++++++++.+++++|.++.|.||++.+.|+++|.++||++|+++++|++-+.+.. .+.-.+|+|+++.|..|
T Consensus 150 ~-----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~~-~~pL~lGADIV~hSaTK 223 (409)
T KOG0053|consen 150 D-----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPYN-QDPLPLGADIVVHSATK 223 (409)
T ss_pred h-----hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCcccc-cChhhcCCCEEEEeeee
Confidence 8 89999999999999999999999999999999999999999999999999987743 34446789999999999
Q ss_pred cCCCCc---ceEEEEc-ccccccCC
Q 017640 271 MCGPTG---IGFLFGK-SDLLSAMP 291 (368)
Q Consensus 271 ~~g~~G---~G~l~~~-~~li~~l~ 291 (368)
++|+.. .|.++.+ +++..+++
T Consensus 224 yi~Ghsdvi~G~iv~n~~~~~~~l~ 248 (409)
T KOG0053|consen 224 YIGGHSDVIGGSVVLNSEELASRLK 248 (409)
T ss_pred eecCCcceeeeEEecCcHHHHHHHH
Confidence 999887 7788776 56655554
No 277
>PRK15029 arginine decarboxylase; Provisional
Probab=99.74 E-value=1.1e-16 Score=159.88 Aligned_cols=223 Identities=11% Similarity=0.081 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
-.+.+.++..|+.||++ ...++++|+|.++..++.+. +++||.|++...+|.|++.++. ..|++++++..
T Consensus 205 G~I~eAq~~aA~~fgA~--~t~FlvNGST~gn~a~i~a~----~~~gd~Vlv~RN~HKSv~~al~----L~ga~Pvyl~P 274 (755)
T PRK15029 205 GAFGESEKYAARVFGAD--RSWSVVVGTSGSNRTIMQAC----MTDNDVVVVDRNCHKSIEQGLI----LTGAKPVYMVP 274 (755)
T ss_pred cHHHHHHHHHHHHhCCC--cEEEEeCChhHHHHHHHHHh----cCCCCEEEeecccHHHHHHHHH----HcCCeEEEecc
Confidence 35778999999999997 37789999999999999988 9999999999999999876543 45999999976
Q ss_pred CCC-----CCCC-----HHHHHHhcccC--ce--------EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCC
Q 017640 191 NDD-----ESPD-----LDKLKEMLSRK--TK--------LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVP 250 (368)
Q Consensus 191 ~~~-----~~~d-----~~~l~~~l~~~--~~--------~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~ 250 (368)
..+ +.++ ++.++++++.. .+ ++++++|+. .|.++++++|+++|+++|+.|++|+||+.-
T Consensus 275 ~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah 353 (755)
T PRK15029 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_pred cccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccc
Confidence 532 3444 88999888542 23 889998854 799999999999999999999999999842
Q ss_pred c-----ccc--cC-----CCCCcc-EEEecCcCcCC-CCcceEEEEccc--ccc--cCCCcccCCcceeecccCCCCCCC
Q 017640 251 H-----MVV--DV-----QGLDAD-FLVASSHKMCG-PTGIGFLFGKSD--LLS--AMPPFLGGGEMISDVFLDHSTFAD 312 (368)
Q Consensus 251 ~-----~~~--~~-----~~~~~d-~~~~s~~K~~g-~~G~G~l~~~~~--li~--~l~~~~~g~~~~~~~~~~~~~~~~ 312 (368)
. .|- .+ ...++| +++-|.||.++ ....++|.++.+ .++ +++..+
T Consensus 354 ~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l------------------ 415 (755)
T PRK15029 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAY------------------ 415 (755)
T ss_pred cccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHH------------------
Confidence 1 111 11 114688 88889999765 556888888654 222 111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHH-hCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 313 PPSRFEAGTPAIGEAIGLGAAIDYLST-IGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 313 ~~~~~~~gt~~~~~~~a~~~al~~~~~-~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
.-+.+.+|+++.++++..+..++.. .| ..+.++..+++..+++.|.++.+
T Consensus 416 --~~~qSTSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 416 --MMHATTSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred --HHHcCCCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 2345668999999999999999986 45 45567777788888888877654
No 278
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.74 E-value=7.4e-16 Score=147.29 Aligned_cols=255 Identities=18% Similarity=0.118 Sum_probs=165.5
Q ss_pred CeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|.. ..|..+|.+.+++.+.++...... .. . ..+...++.+.|+++.+. +.+.|++++++
T Consensus 39 G~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~---~~-~---~~~~~~~l~~~l~~~~~~---~~~~~~~sGse 108 (403)
T PRK05093 39 GKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHIS---NV-F---TNEPALRLAKKLIDATFA---ERVFFANSGAE 108 (403)
T ss_pred CCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCccc---Cc-c---CCHHHHHHHHHHHhhCCC---CEEEEeCchHH
Confidence 44466653 356789999999999887642211 10 0 122334788888888754 38899999999
Q ss_pred HHHHHHHHccCCCC----CCCCEEEEcCCCCcccHHHHHHHH------H---HcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 141 AINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVA------Q---KTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 141 a~~~~~~~~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~------~---~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
|+..+++..+.... ...+.|+..+..||+.......+. . ....++..++.+ |++.+++.+.+
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~ 183 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFN-----DLAAVKAVIDD 183 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCC-----CHHHHHHHhcC
Confidence 99999986522110 234578888888887654222211 0 001123344433 89999999988
Q ss_pred CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc--cc--cCCCCCccEEEecCcCcCCCCc--
Q 017640 208 KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~--~~--~~~~~~~d~~~~s~~K~~g~~G-- 276 (368)
++++|+++.+++..|...| +++|.++|++||+++|+|++|+ ++.. .+ ......+|+ .|++|.++ +|
T Consensus 184 ~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~s~sK~l~-~G~r 260 (403)
T PRK05093 184 HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDI--LTSAKALG-GGFP 260 (403)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCE--EEeccccc-CCcc
Confidence 8999999955444444433 8999999999999999999988 2221 11 112234664 46789888 46
Q ss_pred ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
+|++++++++++.+.+...+. . . ..+....+++.++++.+.. ..+.++.++..+++
T Consensus 261 ig~vv~~~~i~~~l~~~~~~~------------------t--~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l 316 (403)
T PRK05093 261 IGAMLTTAEIASHFKVGTHGS------------------T--Y-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRF 316 (403)
T ss_pred eEEEEEcHHHHhhcCCCCCCC------------------C--C-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHH
Confidence 999999999887776433211 1 1 3455567777777887754 23456677777777
Q ss_pred HHHHHhh
Q 017640 357 IIVIQER 363 (368)
Q Consensus 357 ~~~l~~~ 363 (368)
.+.|.++
T Consensus 317 ~~~L~~~ 323 (403)
T PRK05093 317 VDGLQKI 323 (403)
T ss_pred HHHHHHH
Confidence 7777664
No 279
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.74 E-value=5.4e-17 Score=150.97 Aligned_cols=268 Identities=18% Similarity=0.144 Sum_probs=166.5
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHH-HHHHHHHHHHHHHHHcCCCCCC-cE-EEeCCHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAK-ATDEYELARKKVAAFINASDSG-EI-VFTKNATEA 141 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~r~~la~~~~~~~~~-~v-~~t~g~t~a 141 (368)
..+.|-.+. ..+++.+.+++...+..-+ +.|.. .++.|.. ..+...-.++++.++|++++.+ .+ +-.-|++.|
T Consensus 21 ~~l~LiaSE-N~~Sp~v~~al~S~l~nkyaeg~pg~-ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~A 98 (399)
T PF00464_consen 21 STLNLIASE-NYMSPAVREALGSDLTNKYAEGYPGK-RYYGGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQA 98 (399)
T ss_dssp HSEE-CTT------HHHHHHHTSGGGGS-TTEETTE-ESSSSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHH
T ss_pred cCccccCcc-cccCHHHHHHhCCcceeeccccCCCc-ccccCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHH
Confidence 345665544 3567788888765555422 22221 2233333 4455556889999999998543 22 344678899
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHH-HH-----HHcCCEEEEEeCC-CCCCCCHHHHHHhccc-CceEEE
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQL-VA-----QKTGANLKFLNLN-DDESPDLDKLKEMLSR-KTKLVV 213 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~-~~-----~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~ 213 (368)
+..++.++ ++|||+|+..+..+.+....-.. -. .....+.+.++++ +++.||.+++++.+.. +|++|+
T Consensus 99 n~av~~aL----l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi 174 (399)
T PF00464_consen 99 NLAVYMAL----LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLII 174 (399)
T ss_dssp HHHHHHHH----T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEE
T ss_pred HHHHHHHH----HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEE
Confidence 99999999 99999999888766543310000 00 1113578888888 5699999999998865 899999
Q ss_pred EcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCc-CCCCcceEEEEc----
Q 017640 214 IHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKM-CGPTGIGFLFGK---- 283 (368)
Q Consensus 214 ~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~---- 283 (368)
+.....| ..+|++++.++|++.|+++++|.+|..|-+ +-.++ .+|++++|.||. .||.| |+++++
T Consensus 175 ~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~--~ADvvt~sThKtl~GPrg-giI~~~~~~~ 249 (399)
T PF00464_consen 175 CGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFP--YADVVTGSTHKTLRGPRG-GIILTNKGSK 249 (399)
T ss_dssp EE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCC--TSSEEEEESSGGG-SSS--EEEEES-SEE
T ss_pred ECchhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCccc--cceEEEeeccccccccCc-eEEEEcCCcc
Confidence 8887665 467899999999999999999999985433 32232 389999999995 56775 999999
Q ss_pred ----------ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 284 ----------SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 284 ----------~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
+++.+++...... ...|.+....+++++.++....+...+...+++.+++
T Consensus 250 ~~~~~~~~~~~~l~~~I~~avfP--------------------~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NA 309 (399)
T PF00464_consen 250 NVDKKGKEIDEELAEKIDSAVFP--------------------GLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNA 309 (399)
T ss_dssp EE-TTS-EEEHHHHHHHHHHHTT--------------------TT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred ccCCcccccHHHHHHHhccccCC--------------------CcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHH
Confidence 4444444422211 1235788889999999999876555678888899999
Q ss_pred HHHHHHHHhhcCC
Q 017640 354 ICSIIVIQERHNT 366 (368)
Q Consensus 354 ~~l~~~l~~~~g~ 366 (368)
+.+.+.|.+. |+
T Consensus 310 k~La~~L~~~-G~ 321 (399)
T PF00464_consen 310 KALAEALQER-GF 321 (399)
T ss_dssp HHHHHHHHHT-T-
T ss_pred HHHHHHHhhC-Cc
Confidence 9999999876 44
No 280
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.74 E-value=5.9e-16 Score=146.77 Aligned_cols=243 Identities=16% Similarity=0.140 Sum_probs=157.1
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.|..++.+.+++.+.++....... . ...+...++.+.+++..+. +.+++++++++|+..++.... ...
T Consensus 43 lG~~~p~v~~a~~~~~~~~~~~~~-~------~~~~~~~~la~~l~~~~~~---~~~~~~~sG~~a~~~A~~~a~--~~~ 110 (377)
T PRK02936 43 LGHCHPTVTKAVQEQLDDIWHVSN-L------FTNSLQEEVASLLAENSAG---DLVFFCNSGAEANEAALKLAR--KHT 110 (377)
T ss_pred CCCCCHHHHHHHHHHHHhcccccc-c------cCCHHHHHHHHHHHhcCCC---CEEEEeCCcHHHHHHHHHHHH--Hhc
Confidence 467899999999999886421110 0 0123333445555544432 378999999999999998542 123
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHcCC---------EEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~---------~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (368)
.++.|+..++.||+.............. .+..++.+ |++.+++.+.+++++|+++.+++++|...+
T Consensus 111 g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~~~~ii~e~i~~~~G~~~~ 185 (377)
T PRK02936 111 GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFN-----DIKALKEVMNEEVAAVMLEVVQGEGGVIPA 185 (377)
T ss_pred CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCC-----CHHHHHHhccCCeEEEEEecccCCCCCccC
Confidence 4467888888888654333322110000 11223322 789999999888999999999999888754
Q ss_pred ----HHHHHHHHHhcCCEEEEecCCc-CCcc--ccc--CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCccc
Q 017640 227 ----IEEIVHWSHDVGAKVLVDACQS-VPHM--VVD--VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 227 ----l~~i~~l~~~~g~~li~D~a~~-~~~~--~~~--~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~ 295 (368)
+++|.++|++||+++|+|++|. ++.. .+. .....+|++ +++|.++ .| +|+++.++++.+.+.+...
T Consensus 186 ~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~-~G~~ig~v~~~~~~~~~~~~~~~ 262 (377)
T PRK02936 186 DPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAKGLG-NGIPVGAMIGKKELGTAFGPGSH 262 (377)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEE--EEccccc-CCCccEEEEEcHHHHhhccCCCC
Confidence 8999999999999999999986 2221 111 112346654 5789888 45 8999999988776653221
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
. .....+....+++.++++.+... ...++.+++.+++.+.|.+
T Consensus 263 ~---------------------~t~~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~ 305 (377)
T PRK02936 263 G---------------------STFGGNPLAMAAAKEVLQVIKQP---SFLEEVQEKGEYFLQKLQE 305 (377)
T ss_pred C---------------------CCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHH
Confidence 1 11145777788888888877432 2335555566666666554
No 281
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.74 E-value=1.8e-15 Score=142.01 Aligned_cols=263 Identities=15% Similarity=0.177 Sum_probs=181.1
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++-.|||..+ .|+.+|.|++++++++..+........+ .+...++.+.|.+.+..+....++|+++++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~------~e~~v~~ae~L~~~~p~~~~~~~~f~~sGa 127 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLY------YEPYVELAEKLTALAPGSGLKKVFFGNSGA 127 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCccc------chhHHHHHHHHHHhCCcccCCeEEecCCcH
Confidence 5567888765 5688999999999999987533222111 255567888888888775334789999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC----------CEEEEEeCCCCCC------------CC
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG----------ANLKFLNLNDDES------------PD 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g----------~~v~~v~~~~~~~------------~d 197 (368)
+|++.+++..+. ...+..|+.....||+.......+..... ..+..+|....+. -.
T Consensus 128 eA~E~AiKiAr~--~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~ 205 (447)
T COG0160 128 EAVEAAIKIARA--YTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDA 205 (447)
T ss_pred HHHHHHHHHHHH--HhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHH
Confidence 999999997632 44567888888898876654444321111 1244555432111 12
Q ss_pred HHHHHHhccc------CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-C---Ccc-cccCCCCCcc
Q 017640 198 LDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-V---PHM-VVDVQGLDAD 262 (368)
Q Consensus 198 ~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~---~~~-~~~~~~~~~d 262 (368)
.+.++..+.. ++.+++++.++...|.+.| ++++.++|++||+++|+||+|+ + |.+ .++.....+|
T Consensus 206 ~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PD 285 (447)
T COG0160 206 LEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCC
Confidence 3334554422 5789999999999999988 8999999999999999999998 3 322 2222233699
Q ss_pred EEEecCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 263 FLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 263 ~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
+++.| |.+|. ..+|.++.++++.+ ..|...+++. .-|..+.++..+.|+.+++.
T Consensus 286 ivt~a--K~ig~G~Pl~avv~r~ei~~-~~~g~~~~Tf---------------------~GNpva~Aaa~AvL~vie~e- 340 (447)
T COG0160 286 IVTLA--KSLGGGLPLSAVVGRAEIMD-WPPGGHGGTF---------------------GGNPVACAAALAVLDVIEEE- 340 (447)
T ss_pred EEEec--ccccCCCceeEEeccHHhcc-cCCcccCCCC---------------------CcCHHHHHHHHHHHHHHHHc-
Confidence 99988 96664 22999999999876 4444433222 45666777777778877763
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 017640 342 MQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++..++-+++.++|.++
T Consensus 341 --~L~~~a~~~G~~l~~~L~~l 360 (447)
T COG0160 341 --NLLERAAELGEYLRDRLEEL 360 (447)
T ss_pred --cHHHHHHHHHHHHHHHHHHH
Confidence 67788888888888888654
No 282
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.73 E-value=4.5e-16 Score=149.74 Aligned_cols=257 Identities=16% Similarity=0.182 Sum_probs=167.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|..+ .|+.++.+.+++.+.+.....+ . ...+...+++++|++.+... +.|+|++|++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~------~~~~~~~~lae~l~~~~~~~--~~v~~~~sGs 114 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSY---G------APTEAEILLAKEIISRVPSV--EMVRFVNSGT 114 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcC---C------CCCHHHHHHHHHHHHhCCcc--cEEEEeCCHH
Confidence 3445777532 4578999999999998763211 1 01234457999999988654 4899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC-----------------EEEEEeCCCCCCCCHHHHH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-----------------NLKFLNLNDDESPDLDKLK 202 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-----------------~v~~v~~~~~~~~d~~~l~ 202 (368)
+|+..+++..+. ...+++|+..++.|++.......... .+. .+..++. .|+++++
T Consensus 115 eA~e~Alk~ar~--~~gr~~ii~~~~~yhG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~ 186 (423)
T TIGR00713 115 EATMSAVRLARG--YTGRDKIIKFEGCYHGHHDALLVKAG-SGAATLGLPTSPGVPEDFAKLTLVLPY-----NDLEALE 186 (423)
T ss_pred HHHHHHHHHHHH--hhCCCEEEEEcCCCCCChhhhhcccc-CcccccCCCCCCCCCcccccceEEeCC-----CCHHHHH
Confidence 999999986532 34568999999999986543332110 011 1122221 1789999
Q ss_pred Hhcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcc----cccCCCCCccEEEecCcCc
Q 017640 203 EMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQGLDADFLVASSHKM 271 (368)
Q Consensus 203 ~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~~~~~d~~~~s~~K~ 271 (368)
+.+. +++++|+++...+.+|.+.| +++|.++|++||+++|+||+|.--.. ........+|++ +++|.
T Consensus 187 ~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~ 264 (423)
T TIGR00713 187 EVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKI 264 (423)
T ss_pred HHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhh
Confidence 9886 56788888755555898887 78999999999999999999862111 111122346754 67898
Q ss_pred CCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHH
Q 017640 272 CGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAY 348 (368)
Q Consensus 272 ~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~ 348 (368)
+| .| +|++++++++++.+.+... . ........+..+.+++.++++.+++.+ .+.+++.
T Consensus 265 l~-~G~pig~v~~~~~i~~~~~~~~~---~---------------~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~ 325 (423)
T TIGR00713 265 IG-GGLPVGAFGGRREIMERLAPEGP---V---------------YQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDEL 325 (423)
T ss_pred hc-CCCceeeeeEHHHHHHhhCcCCC---e---------------eeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 87 45 8999999998877763110 0 011112466777777888888877643 3344444
Q ss_pred HHHHHHHHHHHHHh
Q 017640 349 EVKWIICSIIVIQE 362 (368)
Q Consensus 349 ~~~l~~~l~~~l~~ 362 (368)
...+.+.+.+.+.+
T Consensus 326 ~~~~~~~l~~~~~~ 339 (423)
T TIGR00713 326 AKRLAEGLSEVLED 339 (423)
T ss_pred HHHHHHHHHHHHHh
Confidence 44444444444443
No 283
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=1.9e-15 Score=143.15 Aligned_cols=247 Identities=15% Similarity=0.116 Sum_probs=154.5
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.++ .|.+.+++.+.+..+..++.. ...++++.+++.+....+..++|++|+++|+..++..... ..
T Consensus 43 lG~-~p~v~~a~~~~~~~~~~~~~~-----------~~~~~~~~la~~l~~~~~~~~~~~~SGseA~~~Al~~ar~--~~ 108 (375)
T PRK04260 43 LGF-HPQVQQALQKQAGLIWHSPNL-----------YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIARK--AT 108 (375)
T ss_pred CCC-CHHHHHHHHHHHHhcCcccCc-----------cCCHHHHHHHHHHhcCcCCEEEEcCccHHHHHHHHHHHHH--hc
Confidence 356 788999999988765333211 1125667777765443332468999999999988887521 34
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHH------cCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC---
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQK------TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP--- 226 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~------~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~--- 226 (368)
+++.|++.+..||+........... .+..+..++.. -..|++.+++.+.+++++|+++.+++++|.+.+
T Consensus 109 ~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~~~~~~ 186 (375)
T PRK04260 109 GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IFNDLNSVKALVNKNTAAVMLELVQGESGVLPADKD 186 (375)
T ss_pred CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CCCCHHHHHHhcCCCeEEEEECCeECCCCCcCCCHH
Confidence 5678888888877644222221100 01011001100 013899999999888899999999999999876
Q ss_pred -HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC-cceEEEEcccccccCCCcccCCcc
Q 017640 227 -IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 227 -l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~-G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
+++|.++|+++|+++++|++|. ++.. ........+|++ +++|.+++. -+|++++++++.+.+......
T Consensus 187 ~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~--- 261 (375)
T PRK04260 187 FVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGYGSHG--- 261 (375)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCCCCC---
Confidence 8999999999999999999985 2211 111223457754 788988742 289999999887666532111
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHH
Q 017640 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~~l~ 361 (368)
...+.+.....++.++++.+...+ .+++++....+.+.+.+.+.
T Consensus 262 ------------------~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 306 (375)
T PRK04260 262 ------------------STFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQ 306 (375)
T ss_pred ------------------CCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 111445556677777777765422 23444444444444444333
No 284
>PLN02624 ornithine-delta-aminotransferase
Probab=99.73 E-value=8.7e-16 Score=149.03 Aligned_cols=256 Identities=13% Similarity=0.149 Sum_probs=168.6
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..|.+.+++.+.+..+..... .. ..+...++.+.++++++. +.++|+++++
T Consensus 73 dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~---~~----~~~~~~~la~~L~~~~~~---~~~~f~~SGs 142 (474)
T PLN02624 73 EGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSR---AF----YNDKFPEFAEYLTSMFGY---DMVLPMNTGA 142 (474)
T ss_pred CCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCccc---cc----CCHHHHHHHHHHHhhcCC---CeEEEeCChH
Confidence 344566653 2456799999999999987532211 11 124445788889998864 3889999999
Q ss_pred HHHHHHHHHccCCC-----CCCC-CEEEEcCCCCcccHHHHHHHHHHc------C---CEEEEEeCCCCCCCCHHHHHHh
Q 017640 140 EAINLVAYSWGLSN-----LKSG-DEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~-----~~~g-d~vl~~~~~~~s~~~~~~~~~~~~------g---~~v~~v~~~~~~~~d~~~l~~~ 204 (368)
+|++.++....... ..++ ..|+.....|++.......+.... + ..+..++.+ |++.+++.
T Consensus 143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~ 217 (474)
T PLN02624 143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG-----DLDALEKI 217 (474)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC-----CHHHHHHH
Confidence 99999998542110 0112 357777888887643333221100 0 012233332 78889888
Q ss_pred cc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcC
Q 017640 205 LS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMC 272 (368)
Q Consensus 205 l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~ 272 (368)
++ +++++|+++.+++++|.++| +++|.++|++||+++|+||+|. +|.. ..+.....+|+++. +|.+
T Consensus 218 l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~l--sK~l 295 (474)
T PLN02624 218 FEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVIL--GKAL 295 (474)
T ss_pred HHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEEe--cccc
Confidence 85 35789999999999999998 9999999999999999999997 3321 22223446787775 5977
Q ss_pred CCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Q 017640 273 GPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEV 350 (368)
Q Consensus 273 g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~ 350 (368)
|..+ +|++++++++++.+.+...+. .| +.+....+++.++++.+.+. .+.++..
T Consensus 296 ggG~~pigav~~~~~i~~~~~~~~~~~------------------T~---~g~pl~~aaa~aaLe~l~~~---~l~~~~~ 351 (474)
T PLN02624 296 GGGVIPVSAVLADKDVMLCIKPGEHGS------------------TF---GGNPLASAVAMAALQVVQDE---KLAERSA 351 (474)
T ss_pred cCCCCcceeeeecHHHHhHhccCCcCC------------------CC---CCCHHHHHHHHHHHHHHHhc---hHHHHHH
Confidence 7553 899999888776655432211 11 45666778888888887763 3445555
Q ss_pred HHHHHHHHHHHh
Q 017640 351 KWIICSIIVIQE 362 (368)
Q Consensus 351 ~l~~~l~~~l~~ 362 (368)
++.+++.+.+.+
T Consensus 352 ~~~~~l~~~L~~ 363 (474)
T PLN02624 352 KLGQELRDQLQK 363 (474)
T ss_pred HHHHHHHHHHHH
Confidence 666666665554
No 285
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.73 E-value=1e-15 Score=146.27 Aligned_cols=255 Identities=13% Similarity=0.110 Sum_probs=168.8
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+..|.+.+++.+.+........ + . ..+...++.+.++++++. +.++|++|++
T Consensus 37 dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~-~--~----~~~~~~~la~~l~~~~~~---~~v~~~~sGs 106 (406)
T PRK12381 37 QGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN-G--Y----TNEPVLRLAKKLIDATFA---DRVFFCNSGA 106 (406)
T ss_pred CCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC-c--c----CCHHHHHHHHHHHhhCCC---CeEEEcCCcH
Confidence 3445677643 567799999999999876422111 1 1 123345788889888754 3899999999
Q ss_pred HHHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHHcC---------CEEEEEeCCCCCCCCHHHHHHhcc
Q 017640 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKTG---------ANLKFLNLNDDESPDLDKLKEMLS 206 (368)
Q Consensus 140 ~a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~~g---------~~v~~v~~~~~~~~d~~~l~~~l~ 206 (368)
+|+..+++..+... ..+++.|+..+..||+.......+..... ..+..++. .|++.+++.+.
T Consensus 107 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~ 181 (406)
T PRK12381 107 EANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY-----NDLNSASALID 181 (406)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCC-----CCHHHHHHhcc
Confidence 99999998753210 12456889989999986543322211000 01122222 28899999998
Q ss_pred cCceEEEEccccccccccc--C---HHHHHHHHHhcCCEEEEecCCc-CCcc--cc--cCCCCCccEEEecCcCcCCCCc
Q 017640 207 RKTKLVVIHHISNMLASIL--P---IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFLVASSHKMCGPTG 276 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~--~---l~~i~~l~~~~g~~li~D~a~~-~~~~--~~--~~~~~~~d~~~~s~~K~~g~~G 276 (368)
+++++|+++. .+++|-++ | +++|.++|++||+++|+||+|. +|.. .+ ......+|+ .+++|.+|+ |
T Consensus 182 ~~~aaviiEP-v~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~g-G 257 (406)
T PRK12381 182 DQTCAVIVEP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV--LTTAKALGG-G 257 (406)
T ss_pred CCeeEEEEeC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE--EEehhhhhC-C
Confidence 8888888874 56665543 2 8999999999999999999984 3221 11 112234676 477797763 4
Q ss_pred --ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 017640 277 --IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWII 354 (368)
Q Consensus 277 --~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~ 354 (368)
+|++++++++++.+.+...+. ..+.+....+++.++++.+.+ +.+.++.+++.+
T Consensus 258 ~~ig~~~~~~~~~~~~~~~~~~~---------------------t~~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~ 313 (406)
T PRK12381 258 FPIGAMLTTEKCASVMTVGTHGT---------------------TYGGNPLASAVAGKVLELINT---PEMLNGVKQRHD 313 (406)
T ss_pred CceEEEEEcHHHHhhcCCCCCCC---------------------CCCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHH
Confidence 899999999887776432211 114566677778888887754 356777888888
Q ss_pred HHHHHHHhh
Q 017640 355 CSIIVIQER 363 (368)
Q Consensus 355 ~l~~~l~~~ 363 (368)
++.+.|.+.
T Consensus 314 ~l~~~L~~l 322 (406)
T PRK12381 314 WFVERLNTI 322 (406)
T ss_pred HHHHHHHHH
Confidence 888877764
No 286
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.72 E-value=2.1e-15 Score=144.12 Aligned_cols=246 Identities=13% Similarity=0.138 Sum_probs=168.4
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCC--
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSN-- 153 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~-- 153 (368)
.|...|.+.+++.+.+..+... +.. ...+...++.+.++++++.+ .+++++++++|+..++..+....
T Consensus 51 ~Gh~~p~v~~a~~~~~~~~~~~---~~~----~~~~~~~~l~~~l~~~~~~~---~~~~~~SGs~A~e~ai~~a~~~~~~ 120 (401)
T TIGR01885 51 QGHCHPKIVKALTEQAQKLTLS---SRA----FYNDVFGEFAEYVTKLFGYD---KVLPMNTGAEAVETAIKLARKWGYK 120 (401)
T ss_pred CCCCCHHHHHHHHHHHHhcccc---ccc----cCCHHHHHHHHHHHhhcCCC---EEEEeCccHHHHHHHHHHHHHHhhh
Confidence 3456899999999988764311 110 02355668999999999753 88999999999999998752110
Q ss_pred ----CCCCCEEEEcCCCCccc-HHHHHHHHH------HcC---CEEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEcc
Q 017640 154 ----LKSGDEVILTVAEHHSA-IVPWQLVAQ------KTG---ANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHH 216 (368)
Q Consensus 154 ----~~~gd~vl~~~~~~~s~-~~~~~~~~~------~~g---~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~ 216 (368)
...++.|+.....|++. ...+. ... ..+ ..+..++.+ |+++|++.++ +++.+|+++.
T Consensus 121 ~~~~~~~~~~i~~~~~~yhg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~avi~E~ 194 (401)
T TIGR01885 121 VKGIPENQAIIVSAKGNFHGRTLGAIS-MSTDPDSRTNFGPYVPGFKKIPYN-----NLEALEEALEDHGPNVCAFIVEP 194 (401)
T ss_pred hcCCCCCCCEEEEECCCcCcccHHHHh-CcCCcccccccCCCCCCceEeCCC-----CHHHHHHHHHhcCCCEEEEEEeC
Confidence 12346788888888864 33222 111 011 123334433 7889998885 4568899999
Q ss_pred cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc--c--ccCCCCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 217 ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--V--VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 217 ~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~--~--~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
+++++|.+.| +++|.++|++||+++|+||+|. +|.. . .+.....+|+++.| |.++..+ +|+++.+++
T Consensus 195 v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~ 272 (401)
T TIGR01885 195 IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG--KALSGGVYPVSAVLADDD 272 (401)
T ss_pred ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCEEEee--ccccCCCCCcEEEEEcHH
Confidence 9999999998 9999999999999999999975 2211 1 22233467887654 9776543 889999998
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+++...+ ..+ +.+....+++.++++.+.+. .+.++..++.+++.+.|+++
T Consensus 273 i~~~~~~~~~~------------------~t~---~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l 326 (401)
T TIGR01885 273 VMLTIKPGEHG------------------STY---GGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKL 326 (401)
T ss_pred HHhhccCCCCC------------------CCC---CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhc
Confidence 88776542211 111 34566677778888888763 45678888889999888875
No 287
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.71 E-value=2.7e-16 Score=155.52 Aligned_cols=233 Identities=17% Similarity=0.160 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
.+.+.++.+|+.||++. ..++++|+|.++..++.+. +++||.|++...+|.|++.+ .....|++++++...
T Consensus 175 ~i~eAq~~AA~~fgAd~--tyFlvNGTS~gn~a~i~a~----~~~Gd~VLvdRN~HKSv~hg---aLiLsGa~PVYl~P~ 245 (720)
T PRK13578 175 AAKDAQKHAAKVFNADK--TYFVLNGTSASNKVVTNAL----LTPGDLVLFDRNNHKSNHHG---ALIQAGATPVYLETA 245 (720)
T ss_pred HHHHHHHHHHHHhCCCc--eEEEeCChhHHHHHHHHHh----cCCCCEEEeecccHHHHHHH---HHHHcCCeEEEeecc
Confidence 46789999999999973 6788999999999999998 99999999999999998764 123459999999876
Q ss_pred CC-----CCCCHH-----HHHHhcccC----------ceEEEEcccccccccccCHHHHHHH-HHhcCCEEEEecCCcCC
Q 017640 192 DD-----ESPDLD-----KLKEMLSRK----------TKLVVIHHISNMLASILPIEEIVHW-SHDVGAKVLVDACQSVP 250 (368)
Q Consensus 192 ~~-----~~~d~~-----~l~~~l~~~----------~~~v~~~~~~n~tG~~~~l~~i~~l-~~~~g~~li~D~a~~~~ 250 (368)
.+ +.++.+ .++++|... .+++++++++. .|.++++++|+++ |+.++ +|++|+||+.-
T Consensus 246 ~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah 323 (720)
T PRK13578 246 RNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGY 323 (720)
T ss_pred ccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhh
Confidence 43 345544 488887654 48889988844 7999999999998 68888 99999998832
Q ss_pred --cccc--cC----CCCCcc----EEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCC
Q 017640 251 --HMVV--DV----QGLDAD----FLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF 317 (368)
Q Consensus 251 --~~~~--~~----~~~~~d----~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 317 (368)
..+. ++ -..+.| +++-|.||.++ ....++|.++.+.++.-+.... ..++...-.-+
T Consensus 324 ~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~-----------~~r~~~al~m~ 392 (720)
T PRK13578 324 EQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCP-----------HKRLNNAFMLH 392 (720)
T ss_pred hccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCC-----------HHHHHHHHHHH
Confidence 1121 11 134677 99999999765 6668888887765532110000 00000001234
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HhhcCC
Q 017640 318 EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI-QERHNT 366 (368)
Q Consensus 318 ~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l-~~~~g~ 366 (368)
.+.+|+++.++++..+..++.....+.+.+...+++..+++.| ..+.++
T Consensus 393 qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~ 442 (720)
T PRK13578 393 ASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLI 442 (720)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 5668999999999999998886434566677777888888887 555554
No 288
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.70 E-value=5.5e-15 Score=140.35 Aligned_cols=260 Identities=14% Similarity=0.073 Sum_probs=163.7
Q ss_pred CeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|.. ..|+..|.+.+++.+.+...... .... ..+...++.+.+.+..+. +.++|++|+++
T Consensus 35 G~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~-~~~~------~~~~~~~la~~l~~~~~~---~~v~f~~SGse 104 (395)
T PRK03715 35 GKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINP-SPAF------YNEPMAKLAGLLTQHSCF---DKVFFANSGAE 104 (395)
T ss_pred CCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccc-cccc------cCHHHHHHHHHHhhccCC---CEEEEeCCcHH
Confidence 34566654 25677899999999988764211 1110 122333455555544322 38999999999
Q ss_pred HHHHHHHHccCCC--CC-CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCC----CCCHHHHHHhcccCceEEE
Q 017640 141 AINLVAYSWGLSN--LK-SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE----SPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 141 a~~~~~~~~~~~~--~~-~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~----~~d~~~l~~~l~~~~~~v~ 213 (368)
|++.+++...... .+ ..+.|+..+..||+.......+......+..+.|..++. ..|++.+++.+.+++++|+
T Consensus 105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi 184 (395)
T PRK03715 105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVM 184 (395)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEE
Confidence 9999998763210 11 235788888888876433333221111111111111111 2378999999988899999
Q ss_pred EcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCC-CcceEEEEc
Q 017640 214 IHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGK 283 (368)
Q Consensus 214 ~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~-~G~G~l~~~ 283 (368)
++.+++..|.+.| +++|.++|++||+++|+|++|+ +|.. ..+.....+|+++. +|.+|. ..+|.++++
T Consensus 185 ~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~--gK~lg~G~p~~av~~~ 262 (395)
T PRK03715 185 LEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTL--GKGIGGGVPLAALLAK 262 (395)
T ss_pred EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeee--hhhhhCCcceEEEEEc
Confidence 9999999999887 9999999999999999999987 3221 11222345888665 496653 237888888
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.. +.+...+ ..| +.+....++..++++.+++ +.+.++.+++.+++.+.|+++
T Consensus 263 ~~i~~-~~~~~~~------------------~T~---~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l 317 (395)
T PRK03715 263 AEVAV-FEAGDQG------------------GTY---NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLEL 317 (395)
T ss_pred ccccc-ccCCCcC------------------CCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 88742 1111110 111 3456667777888888875 346777888888888877654
No 289
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.70 E-value=1.4e-15 Score=142.08 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=176.6
Q ss_pred EEeccCCCCCCcHHHHHH-HHHHHHHhhcc-CCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKA-LQNYYEAYNSN-VHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
.++..+.+...-|.+.+. +.+.-..+..+ |+ ....+++..+.+-+++..++++.|.+-. +.-+..++|.+-+.++
T Consensus 68 ~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPY--QpEisQG~Lq~lfe~Qs~i~eLTGmdva-NaSlyd~atA~aEa~~ 144 (429)
T PF02347_consen 68 SFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPY--QPEISQGRLQALFEYQSMICELTGMDVA-NASLYDGATAAAEAML 144 (429)
T ss_dssp S---CTTT-----HHHHH-HHCCHHCCCS-STT--SGGGBHHHHHHHHHHHHHHHHHHTSSEE--SEBSSCCHHHHHHHH
T ss_pred ccccccccCceeChhhcCccccChhhhccCCCC--CcHHHHHHHHHHHHHHHHHHHhhCCCcc-CCCCCChhHHHHHHHH
Confidence 466777777555555555 44333322222 32 2235677889999999999999999732 3456678877777666
Q ss_pred HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC
Q 017640 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (368)
.+.+.. -+++++|+++...|+......+..++..|.+++.++.++++..| ++++.+|++++|+ ..|.+.+
T Consensus 145 ma~r~~-~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d--------~~~~a~v~vq~Pn-~~G~~ed 214 (429)
T PF02347_consen 145 MAVRAT-KRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD--------DDDTAAVMVQNPN-TFGVFED 214 (429)
T ss_dssp HHHHHH-TT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB---------STTEEEEEEESS--TTSB--T
T ss_pred HHHHhc-ccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc--------ccCeEEEEeecCC-CCceEee
Confidence 665321 22346999999999998877777888889999999988777766 6789999999996 5799999
Q ss_pred HHHHHHHHHhcCCEEEEecCCcCCcccc-cCCCCCccEEEecCcCc------CCCCcceEEEEcccccccCCCcccCCcc
Q 017640 227 IEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGLDADFLVASSHKM------CGPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~~~~~~d~~~~s~~K~------~g~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
+++|.+++|++|.++++ ++......-+ ...+++.|+++++ +|. ||+|++|++.+++++++.++..+.|-+.
T Consensus 215 ~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~ 292 (429)
T PF02347_consen 215 IKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTK 292 (429)
T ss_dssp HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEE
T ss_pred HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccc
Confidence 99999999999999887 6644222212 3456799999887 664 4566699999999999999877765332
Q ss_pred eeecccCC---CCCCCCCCCCCCCCCCHH---HHH--HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 300 ISDVFLDH---STFADPPSRFEAGTPAIG---EAI--GLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 300 ~~~~~~~~---~~~~~~~~~~~~gt~~~~---~~~--a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
...-...+ ..-.+.+-|.+-.|.|+. .+. .+...+.++-..|++.+.+++..++.|+.+.|.+..+
T Consensus 293 D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~ 366 (429)
T PF02347_consen 293 DADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYG 366 (429)
T ss_dssp BCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTB
T ss_pred cccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11100000 011233445666677663 232 3445556677779999999999999999999988633
No 290
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.69 E-value=2.6e-15 Score=140.81 Aligned_cols=222 Identities=18% Similarity=0.162 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+...++++.+++++|.+ .+++|+++|.|++++.. + .+++||+| +++.|... .....+..|+.++-++.
T Consensus 71 ~s~~~lE~~va~~~G~~---~av~v~sGT~Al~ll~~-l---~l~pGDeV--psn~~f~T---t~ahIe~~Gav~vDi~~ 138 (450)
T TIGR02618 71 RNFYHLERTVRELYGFK---YVVPTHQGRGAENLLSQ-I---AIKPGDYV--PGNMYFTT---TRYHQEKNGATFVDIII 138 (450)
T ss_pred CcHHHHHHHHHHHHCCC---eEEEcCCHHHHHHHHHH-h---CCCCcCEE--CCceeHHH---HHHHHHhCCeEEEeeec
Confidence 34558999999999987 78999999999998654 3 38999977 55655443 33334566876666643
Q ss_pred C----------CCCCCCHHHHHHhccc----CceEEEEccccccc-ccccC---HHHHHHHHHhcCCEEEEecCCcCCcc
Q 017640 191 N----------DDESPDLDKLKEMLSR----KTKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM 252 (368)
Q Consensus 191 ~----------~~~~~d~~~l~~~l~~----~~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~ 252 (368)
+ .+|.+|++.|+++|++ ++++|++..++|.. |..+| +++|.++|++||+.+|.|+++.++.-
T Consensus 139 dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA 218 (450)
T TIGR02618 139 DEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENA 218 (450)
T ss_pred ccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhCh
Confidence 3 3488999999999986 34578888888865 78866 78999999999999999999987531
Q ss_pred c-----------ccCC------CCCccEEEecCcCcCCCCcceEEE-EcccccccCCCcc--cCCcceeecccCCCCCCC
Q 017640 253 V-----------VDVQ------GLDADFLVASSHKMCGPTGIGFLF-GKSDLLSAMPPFL--GGGEMISDVFLDHSTFAD 312 (368)
Q Consensus 253 ~-----------~~~~------~~~~d~~~~s~~K~~g~~G~G~l~-~~~~li~~l~~~~--~g~~~~~~~~~~~~~~~~ 312 (368)
- .++. ....|.+++|.+|.++.+-.|+++ .+++++++++... .+|..
T Consensus 219 ~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~------------- 285 (450)
T TIGR02618 219 YFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMP------------- 285 (450)
T ss_pred hhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCcc-------------
Confidence 1 1110 115899999999966544237777 4667777766442 12211
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 313 PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 313 ~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..|......+.++..+++...+ ....++....++++.+.|.+. |+
T Consensus 286 -----tyGgla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La~~L~~~-Gv 330 (450)
T TIGR02618 286 -----SYGGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLGDKLKAA-GV 330 (450)
T ss_pred -----ccCchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHC-CC
Confidence 1223333344555555554333 244456666788888888877 54
No 291
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.68 E-value=1.4e-14 Score=139.34 Aligned_cols=262 Identities=14% Similarity=0.149 Sum_probs=169.7
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+......... ....+...++.+.|++.++... +.|+|+++++
T Consensus 39 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~------~~~~~~~~~la~~L~~~~p~~~-~~v~f~~sGs 111 (443)
T PRK08360 39 EGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI------YGFPVEPLLLAEKLIEIAPGDN-PKVSFGLSGS 111 (443)
T ss_pred CCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc------ccCcHHHHHHHHHHHHhCCCCC-CEEEEcCCHH
Confidence 344577763 35678999999999998864222110 0112334467777888876443 3899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-------cC--CEEEEEeCCCC----CC--------CCH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-------TG--ANLKFLNLNDD----ES--------PDL 198 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-------~g--~~v~~v~~~~~----~~--------~d~ 198 (368)
+|++.+++..+. ...+..|+.....||+........... .+ ..+..++.... +. -++
T Consensus 112 EAve~AlklAr~--~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 112 DANDGAIKFARA--YTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHH--hcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 999999997632 345567888888888765332222110 00 12333443211 00 124
Q ss_pred HHHHHhcc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCccEE
Q 017640 199 DKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFL 264 (368)
Q Consensus 199 ~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~d~~ 264 (368)
+.+++.+. +++++|+++..++++|.+.| +++|.++|++||+++|+||+|. +|... .......+|++
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii 269 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII 269 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE
Confidence 45566663 46899999999999999887 8899999999999999999987 33221 11123457876
Q ss_pred EecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 265 VASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 265 ~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
+ ++|.+| .| +|++++++++++.+.+...+ + ....+....+++.++++.+++.
T Consensus 270 t--lsK~l~-~G~pigav~~~~~i~~~~~~~~~~--------------------~-T~~~~p~~~aaa~a~l~~l~~~-- 323 (443)
T PRK08360 270 T--LGKPLG-GGLPISATIGRAEIMDSLPPLAHA--------------------F-TLSGNPVASAAALAVIEEIEEK-- 323 (443)
T ss_pred E--eccccc-CCceeEEEEEcHHHHhhhcCCCCC--------------------C-CCCcCHHHHHHHHHHHHHHHHc--
Confidence 5 479887 34 89999999888776532211 1 1134555577777888887764
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 017640 343 QKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++++++.+++.+.|++.
T Consensus 324 -~l~~~~~~~g~~l~~~L~~l 343 (443)
T PRK08360 324 -NLLKRAEKLGNYTKKRLEEM 343 (443)
T ss_pred -CHHHHHHHHHHHHHHHHHHH
Confidence 35677777777777776554
No 292
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=2.7e-16 Score=133.53 Aligned_cols=249 Identities=16% Similarity=0.109 Sum_probs=173.1
Q ss_pred CCCeEEeccCCCCC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 65 SKKLVYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 65 ~~~~i~l~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
|+.+|-+|...+.. ++|...+.-. . .+.. .-++++.++++--+..++ ++++.-|+.+.|.
T Consensus 40 G~~iv~ld~~e~~ryPdP~q~efk~-~------~~d~-----------rnk~ls~a~~~dkpLt~d-nic~GvGsDE~ID 100 (375)
T KOG0633|consen 40 GRDIVKLDANENPRYPDPEQMEFKY-V------YPDP-----------RNKRLSDALAQDKPLTSD-NICVGVGSDELID 100 (375)
T ss_pred CCCceEeccccCCCCcCHHHccccc-c------cCCc-----------ccchhhhhcccCCCCCcc-ceEEecCcHHHHH
Confidence 57889999988774 3444332211 1 1110 011455556655555554 9999999999999
Q ss_pred HHHHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccc
Q 017640 144 LVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNM 220 (368)
Q Consensus 144 ~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~ 220 (368)
++++.. +.|| ++|+...|.|.... .-+...+++|+.||.++++.++++++.+.+.. .++++++++|.||
T Consensus 101 ~iiR~~----c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgNP 172 (375)
T KOG0633|consen 101 LIIRCV----CDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGNP 172 (375)
T ss_pred HHHhhe----ecCCccceeecCCcceeEE----EEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCCC
Confidence 999987 8898 78999999777633 23455689999999999999999999998865 5799999999999
Q ss_pred cccccCHHHHHHHHHhc-CCEEEEecCCcC--Ccc-ccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 221 LASILPIEEIVHWSHDV-GAKVLVDACQSV--PHM-VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~-g~~li~D~a~~~--~~~-~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
||.++..+.|.++.+-. +.++++|++|-- |.. ... +.++..-+++-++||.||..| +|+-+.+.++++.+...
T Consensus 173 tg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~ 252 (375)
T KOG0633|consen 173 TGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRA 252 (375)
T ss_pred CcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhc
Confidence 99999999998888764 689999999862 211 111 233344566669999999999 89998888877655433
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI---GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~---g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.... ..+.+ +-..|++.+... .++..++-+.+...++..+|.+++++
T Consensus 253 KaPY-----------------------NiS~~---~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~ 302 (375)
T KOG0633|consen 253 KAPY-----------------------NISVA---GSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFL 302 (375)
T ss_pred cCCc-----------------------cccch---hHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 2110 11222 222333333322 25666777777788888888887654
No 293
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.67 E-value=1.1e-14 Score=139.53 Aligned_cols=258 Identities=16% Similarity=0.137 Sum_probs=169.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.|.+++.+.+....... .+ ...+...++.+.|++.+.... +.++|+++++
T Consensus 73 dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~---~~----~~~~~~~~lAe~L~~~~p~~~-~~v~f~~SGs 144 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHS---QE----LLDPLRALLAKTLAALTPGKL-KYSFFCNSGT 144 (442)
T ss_pred CCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcc---cc----cCCHHHHHHHHHHHHhCCCCc-CEEEEeCCch
Confidence 455688853 356889999999999988653221 11 113344567888888775433 3789999999
Q ss_pred HHHHHHHHHccCCCC-CCCCEEEEcCCCCcccHHHHHHHHHHc---------CCEEEEEeCCCCCCCCHHHHHHhcc---
Q 017640 140 EAINLVAYSWGLSNL-KSGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDESPDLDKLKEMLS--- 206 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~v~~~~~~~~d~~~l~~~l~--- 206 (368)
+|++.+++..+.... +.+..|+.....||+.......+.... ...+..+|.+ |.+.+++.++
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~ 219 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFG-----DIEAMLKALNECK 219 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCC-----CHHHHHHHHHHHh
Confidence 999999987532111 134579999999998754333321100 0112333332 6777777664
Q ss_pred ---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCC
Q 017640 207 ---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP 274 (368)
Q Consensus 207 ---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~ 274 (368)
.++.+|+++......|.+.| ++++.++|++||+++|+||+|. +|.. ..+.....+|+++ ++|.+|.
T Consensus 220 ~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~ 297 (442)
T TIGR03372 220 KTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LAKALGG 297 (442)
T ss_pred cCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee--ehhhhcC
Confidence 35789999999999999988 9999999999999999999985 4432 1122234589887 5696653
Q ss_pred C--cceEEEEcccccccCC--CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Q 017640 275 T--GIGFLFGKSDLLSAMP--PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEV 350 (368)
Q Consensus 275 ~--G~G~l~~~~~li~~l~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~ 350 (368)
. .+|.+++++++.+.+. +...+ .....|..+.++..++|+.+++.+ +.++.+
T Consensus 298 G~~Pigavv~~~~i~~~~~~~~~~~~---------------------~T~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~ 353 (442)
T TIGR03372 298 GVMPIGATIATEAVFSVLFDNPFLHT---------------------TTFGGNPLACAAALATINELLEKN---LPAQAA 353 (442)
T ss_pred CcccceEEEecHHHHHhhhccCcccc---------------------CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHH
Confidence 2 3788888888876653 11111 111347778888888999888754 445555
Q ss_pred HHHHHHHHHHHh
Q 017640 351 KWIICSIIVIQE 362 (368)
Q Consensus 351 ~l~~~l~~~l~~ 362 (368)
++.+++.+.|++
T Consensus 354 ~~G~~l~~~L~~ 365 (442)
T TIGR03372 354 IKGDFLLDGFQQ 365 (442)
T ss_pred HHHHHHHHHHHH
Confidence 666666655544
No 294
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.67 E-value=2.3e-15 Score=129.96 Aligned_cols=258 Identities=19% Similarity=0.159 Sum_probs=183.3
Q ss_pred CCeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.+++|-.+.+ + .-.|++.++-+++++++...+.......++ ....+.++..+|++.+.+ +.++.+++-.|+.
T Consensus 67 k~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqfh~rE---D~ilypscfdANa 141 (417)
T KOG1359|consen 67 KKILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQFHGRE---DTILYPSCFDANA 141 (417)
T ss_pred cceeeecccccccccCChHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHHhCCC---ceEEeccccccch
Confidence 45556555443 3 568899999999999988777655444544 567778999999999987 3466677778999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----cCceEEEEccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----RKTKLVVIHHISN 219 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n 219 (368)
.++.++ ++|.|.|+-.+-+|.|..+..+. |++++ .+|+.+++..+. -+-++|+.....+
T Consensus 142 g~feai----l~pedAvfSDeLNhASIIdGirL-ckry~------------h~dv~~l~~~l~~a~k~r~klv~TDg~FS 204 (417)
T KOG1359|consen 142 GAFEAI----LTPEDAVFSDELNHASIIDGIRL-CKRYR------------HVDVFDLEHCLISACKMRLKLVVTDGVFS 204 (417)
T ss_pred HHHHHh----cChhhhhhccccccchhhhhhHH-Hhhhc------------cchhHHHHHHHHHhhhheEEEEEecceec
Confidence 999888 89999999999999999887554 55432 225666665554 3568999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc--------CCCCCccEEEecCcCcCCCCcceEEEEcccccccCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--------VQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~--------~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~ 291 (368)
+.|.+.|+++|.+++++||.++++|++|+.|..-.. --.-++|++.++++|.+|+.-.||..++..++.-++
T Consensus 205 MDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~li~llr 284 (417)
T KOG1359|consen 205 MDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKPLISLLR 284 (417)
T ss_pred cCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCCCCccCChhHHHHHH
Confidence 999999999999999999999999999996654211 111368999999999888665699999999887665
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+.-.. + -| +.+.+..-+.....+++.+.. -..+..+.+...+++.+..... |+|
T Consensus 285 qr~Rp-----y-------------lF-SnslppavV~~a~ka~dllm~--s~~~i~~~~a~~qrfr~~me~a-Gft 338 (417)
T KOG1359|consen 285 QRSRP-----Y-------------LF-SNSLPPAVVGMAAKAYDLLMV--SSKEIQSRQANTQRFREFMEAA-GFT 338 (417)
T ss_pred hcCCc-----e-------------ee-cCCCChhhhhhhHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhc-Cce
Confidence 33211 0 11 113333333344455665554 3445566666667776665543 544
No 295
>PLN00144 acetylornithine transaminase
Probab=99.67 E-value=1e-14 Score=138.00 Aligned_cols=256 Identities=16% Similarity=0.103 Sum_probs=163.9
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+....... ... ..+...++.+.|++..+. +.|.|+++++
T Consensus 13 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~---~~~----~~~~~~~la~~l~~~~~~---~~v~f~~sGs 82 (382)
T PLN00144 13 EGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVS---NVY----HTIPQVELAKRLVASSFA---DRVFFCNSGT 82 (382)
T ss_pred CCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCcc---ccc----cCHHHHHHHHHHHhcCCC---CeEEEeCCcH
Confidence 344577763 356789999999999998642211 111 123334677777776542 3899999999
Q ss_pred HHHHHHHHHccCCCCC-----C------CCEEEEcCCCCcccHHHHHHHHHHcCC---------EEEEEeCCCCCCCCHH
Q 017640 140 EAINLVAYSWGLSNLK-----S------GDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDESPDLD 199 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~-----~------gd~vl~~~~~~~s~~~~~~~~~~~~g~---------~v~~v~~~~~~~~d~~ 199 (368)
+|++.+++..+...-+ + +.+|+....+||+.............. .+..++.+ |++
T Consensus 83 eA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-----d~~ 157 (382)
T PLN00144 83 EANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG-----NLE 157 (382)
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-----CHH
Confidence 9999999865321100 1 357898899999866443332110000 12233322 789
Q ss_pred HHHHhccc-CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCc
Q 017640 200 KLKEMLSR-KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSH 269 (368)
Q Consensus 200 ~l~~~l~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~ 269 (368)
.+++.+.. ++++|+++..+||.|...+ +++|.++|++||+++|+|+++. ++.. +.+.....+| +.+++
T Consensus 158 ~l~~~~~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~s 235 (382)
T PLN00144 158 AARKLIQKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLA 235 (382)
T ss_pred HHHHhcCCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC--EEEec
Confidence 99988854 6788999888999555543 8899999999999999999987 3222 1123345678 55566
Q ss_pred CcCCCC-cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 017640 270 KMCGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (368)
Q Consensus 270 K~~g~~-G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~ 348 (368)
|.+++. .+|++++++++.+.+.+...+. ....+....+++.++++++++. .+.++
T Consensus 236 K~l~~G~pig~v~~~~~~~~~~~~~~~~~---------------------T~~~~pl~~aaa~a~l~~i~~~---~~~~~ 291 (382)
T PLN00144 236 KPLAGGLPIGAVLVTEKVASAINPGDHGS---------------------TFAGGPLVCNAALAVLDKISKP---GFLAS 291 (382)
T ss_pred ccccCCcceEEEEEcHHHHhccCCCCCCC---------------------CCCCCHHHHHHHHHHHHHHhhc---hHHHH
Confidence 976542 2999999999887766432211 1145666677788888888763 34455
Q ss_pred HHHHHHHHHHHHHh
Q 017640 349 EVKWIICSIIVIQE 362 (368)
Q Consensus 349 ~~~l~~~l~~~l~~ 362 (368)
++++.+++.+.+.+
T Consensus 292 ~~~~g~~l~~~l~~ 305 (382)
T PLN00144 292 VAKKGEYLRELLRR 305 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555554443
No 296
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.67 E-value=1.2e-14 Score=134.19 Aligned_cols=254 Identities=17% Similarity=0.179 Sum_probs=178.3
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+--|+|+.. .|+-+|.|.+++++.+..- ..+..+ .+..-++.+.+.+.++.- +.|-|++++||
T Consensus 52 Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G-------~~fg~P--te~Ei~~Aell~~~~p~~--e~vrfvnSGTE 120 (432)
T COG0001 52 GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG-------LSFGAP--TELEVELAELLIERVPSI--EKVRFVNSGTE 120 (432)
T ss_pred CCEeeehhccCcccccCCCCHHHHHHHHHHHHhc-------CCCCCC--CHHHHHHHHHHHHhcCcc--cEEEEecchhH
Confidence 334666632 4467899999999998862 222222 344446778888888764 48999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC-----------------CEEEEEeCCCCCCCCHHHHHH
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG-----------------ANLKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g-----------------~~v~~v~~~~~~~~d~~~l~~ 203 (368)
|.+.+++..+ ....+|+|+..+.+||+..+.+..-+. .| ..++.+|.+ |++.+++
T Consensus 121 AtmsAiRlAR--a~TgR~kIikF~G~YHG~~D~~lv~ag-sg~~t~g~p~s~Gvp~~~a~~ti~~~yN-----D~~al~~ 192 (432)
T COG0001 121 ATMSAIRLAR--AYTGRDKIIKFEGCYHGHSDSLLVKAG-SGAATLGSPSSPGVPADVAKHTLVLPYN-----DLEALEE 192 (432)
T ss_pred HHHHHHHHHH--HhhCCCeEEEEcCCCCCCccHHHhhcC-cCcccCCCCCCCCCChhhhccEEEecCC-----CHHHHHH
Confidence 9999999764 367789999999999998877665322 11 123344444 8999999
Q ss_pred hccc---CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcccc----cCCCCCccEEEecCcCcC
Q 017640 204 MLSR---KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHMVV----DVQGLDADFLVASSHKMC 272 (368)
Q Consensus 204 ~l~~---~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~~~----~~~~~~~d~~~~s~~K~~ 272 (368)
+++. +..+|+++.....-|.+.| +++|.++|++||+++|+||+......++ +.....+|+.+.+ |..
T Consensus 193 ~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PDlttlG--KiI 270 (432)
T COG0001 193 AFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPDLTTLG--KII 270 (432)
T ss_pred HHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcchhhhh--hhh
Confidence 8875 6799999999999999988 8999999999999999999987333322 2223457877766 955
Q ss_pred C-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 273 G-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 273 g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
| +-.+|.+.+++++.+.+.|.- ..|..|| -|..+++|-.++++.+.+. +...+++
T Consensus 271 GGGlP~ga~gGr~eiM~~~~p~g--------------------~vyqaGT~sgnplamaAG~atl~~l~~~--~~~y~~l 328 (432)
T COG0001 271 GGGLPIGAFGGRAEIMEQLAPLG--------------------PVYQAGTLSGNPLAMAAGLATLEELMTE--EGVYERL 328 (432)
T ss_pred cCCcceeeeccHHHHHhhhCCCC--------------------CccccCCCCCcHHHHHHHHHHHHHHHhc--ccHHHHH
Confidence 4 334899999999988665442 2344455 4555666667777777662 2255666
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
.++.+.|.+.|+++
T Consensus 329 ~~~~~~L~~gl~~~ 342 (432)
T COG0001 329 DALGERLAEGLRAA 342 (432)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666666666543
No 297
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.67 E-value=3.2e-15 Score=135.70 Aligned_cols=167 Identities=19% Similarity=0.228 Sum_probs=129.1
Q ss_pred HHHHHHHHHcC----CC--CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 115 LARKKVAAFIN----AS--DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 115 ~~r~~la~~~~----~~--~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
++...+.++.+ .+ .+.+|++|+|.|.++..+++.+ +++||.|++....|++....+ +..|++++.|
T Consensus 104 eLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~----~N~gd~vlie~~ty~~AL~s~----~a~gv~~ipv 175 (472)
T KOG0634|consen 104 ELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTL----INRGDHVLIEEYTYPSALQSM----EALGVKIIPV 175 (472)
T ss_pred HHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHh----hcCCCceEEecccchHHHHhc----cccCceEEec
Confidence 44444444444 33 2248999999999999999998 999999999999888865444 4459999999
Q ss_pred eCCCCCCCCHHHHHHhccc---------Cce-EEEEcccccccccccCH---HHHHHHHHhcCCEEEEecCCcCCcc---
Q 017640 189 NLNDDESPDLDKLKEMLSR---------KTK-LVVIHHISNMLASILPI---EEIVHWSHDVGAKVLVDACQSVPHM--- 252 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~---------~~~-~v~~~~~~n~tG~~~~l---~~i~~l~~~~g~~li~D~a~~~~~~--- 252 (368)
+.+.+|. +++.|++.+.. +++ +.+++..+||||..+++ ++|.++|++|+++||.|+.|.+-..
T Consensus 176 ~md~~Gi-~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y 254 (472)
T KOG0634|consen 176 KMDQDGI-DPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTY 254 (472)
T ss_pred cccCCCC-CHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccceeecccc
Confidence 9877776 89999988753 244 55699999999999994 5999999999999999999873111
Q ss_pred -----------------------cccCCCCCccEEEecCcCcCCCCc-ceEEEEcccccccC
Q 017640 253 -----------------------VVDVQGLDADFLVASSHKMCGPTG-IGFLFGKSDLLSAM 290 (368)
Q Consensus 253 -----------------------~~~~~~~~~d~~~~s~~K~~g~~G-~G~l~~~~~li~~l 290 (368)
.++++-.+..+-..||||.++|.- +||+-+++-+++++
T Consensus 255 ~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ri 316 (472)
T KOG0634|consen 255 NPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRI 316 (472)
T ss_pred CCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHH
Confidence 112223356678889999999865 99999998776654
No 298
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=1.8e-14 Score=138.82 Aligned_cols=261 Identities=12% Similarity=0.086 Sum_probs=168.1
Q ss_pred CeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|.. ..|+.+|.+.+++.+.++.+...+. +.. ..+...++.+.|++++.-.. +.|+|++++++
T Consensus 42 G~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~-~~~-----~~~~~~~la~~L~~~~~~~~-~~v~f~~SGse 114 (433)
T PRK08117 42 GKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPS-GVI-----YYESILKLAEELAEITPGGL-DCFFFSNSGAE 114 (433)
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccc-ccc-----CCHHHHHHHHHHHHhCCCCC-CEEEEeCcHHH
Confidence 33566653 2456899999999999886422211 011 13445578888999884322 38999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHH----H---cC---CEEEEEeCCCCCC------------CCH
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ----K---TG---ANLKFLNLNDDES------------PDL 198 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~----~---~g---~~v~~v~~~~~~~------------~d~ 198 (368)
|+..+++..+. ...+..|+..+..||+.......+.. . .+ ..+..+|....+. -|+
T Consensus 115 A~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 115 AIEGALKLAKH--VTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHH--hcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 99999986532 23456788888888875543222210 0 00 0123333321110 145
Q ss_pred HHHHHhcc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc--cc--cCCCCCccEE
Q 017640 199 DKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VV--DVQGLDADFL 264 (368)
Q Consensus 199 ~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~--~~--~~~~~~~d~~ 264 (368)
+.+++.++ .++.+|+++.+....|.+.| +++|.++|++||+++|+||+|+ +|.. .+ +.....+|+
T Consensus 193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi- 271 (433)
T PRK08117 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDI- 271 (433)
T ss_pred HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCE-
Confidence 66666653 35789999999999999988 9999999999999999999988 2111 11 111224665
Q ss_pred EecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 265 VASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 265 ~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
.+++|.+| .| +|++++++++++.+.....+. . .+.+..+.++..++++.+++.
T Consensus 272 -~t~sK~lg-~G~pigav~~~~~i~~~~~~~~~~~------------------T---~~~np~~~aaa~a~L~~l~~~-- 326 (433)
T PRK08117 272 -MTIAKGIA-SGLPLSAVVASKELMEQWPLGSHGT------------------T---FGGNPVACAAALATLEVIKEE-- 326 (433)
T ss_pred -eehhhhcc-CCCcceeEEEcHHHHhhccCCCCCC------------------C---CCcCHHHHHHHHHHHHHHHhc--
Confidence 57779877 34 899999998877664322111 1 145677778888888877653
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 017640 343 QKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++++++.+++.+.|.++
T Consensus 327 -~l~~~~~~~g~~l~~~L~~l 346 (433)
T PRK08117 327 -KLLDNANEMGAYALERLEVL 346 (433)
T ss_pred -cHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777776654
No 299
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.67 E-value=8.1e-15 Score=131.22 Aligned_cols=262 Identities=19% Similarity=0.217 Sum_probs=184.2
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhccCCC--CcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEe-CCHHHHHHHHHHHcc
Q 017640 74 AATSQKPIAVLKALQNYYEAYNSNVHR--GIHFLSAKATDEYELARKKVAAFINASDSGEIVFT-KNATEAINLVAYSWG 150 (368)
Q Consensus 74 ~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t-~g~t~a~~~~~~~~~ 150 (368)
+++..+|++|++.+++.+..+.+...+ -..+.+..+.....+.++.+.++++.|+++.|+|. .|+|....++...+
T Consensus 11 aGPa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nL- 89 (365)
T COG1932 11 AGPAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNL- 89 (365)
T ss_pred CCcccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhh-
Confidence 345568999999998888887651100 02233455678889999999999999999999887 46688888888887
Q ss_pred CCCCCCCCE--EEEcCCCCcccHHHHHHHHHHcCC--EEEEEeCCCC---CCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 151 LSNLKSGDE--VILTVAEHHSAIVPWQLVAQKTGA--NLKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 151 ~~~~~~gd~--vl~~~~~~~s~~~~~~~~~~~~g~--~v~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
+.++.. |.....+..+ .+ .++..+. ++..+..... ..++++..+ +.++...|.+|+..+.+|+
T Consensus 90 ---l~~~~~~yv~~g~Ws~~a----~~-eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv 159 (365)
T COG1932 90 ---LGKRGTDYVDTGAWSEFA----IK-EAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGV 159 (365)
T ss_pred ---hcccCceeEeeeehhHhH----HH-HHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccce
Confidence 554433 4444432222 23 2344453 2222221222 233444333 3344566899999999999
Q ss_pred ccC-HHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcc-cCCccee
Q 017640 224 ILP-IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFL-GGGEMIS 301 (368)
Q Consensus 224 ~~~-l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~-~g~~~~~ 301 (368)
.+| ...+. .+.++++|.+..+...++|+.+ .|++.++.+|.+||.|++++++|+++++++++.. +.-
T Consensus 160 ~v~~~p~~~-----~~~~~v~D~SS~ilsr~iDvsk--~dviyagaQKnlGpaGltvvIvr~~~l~r~~~~~~P~i---- 228 (365)
T COG1932 160 EVPELPDIG-----SDGLLVADASSAILSRPIDVSK--YDVIYAGAQKNLGPAGLTVVIVRPDLLERAESYTLPSI---- 228 (365)
T ss_pred EccCCCCCC-----CCceEEEecccHHhcCCCChhH--cceEEEehhhccCccceEEEEEcHHHHhcccccCCchH----
Confidence 988 23221 1278999999999888888876 8899999999999999999999999999887652 110
Q ss_pred ecccCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 302 DVFLDHSTFA-DPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 302 ~~~~~~~~~~-~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..|. ...+..-..||++..++-+...+++++.. |++.+.++..+.++.+++++.+.
T Consensus 229 ------f~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s 286 (365)
T COG1932 229 ------FDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS 286 (365)
T ss_pred ------hhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 1111 11222334589999999999999999987 79999999999999999999887
No 300
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=1.2e-14 Score=139.63 Aligned_cols=269 Identities=10% Similarity=0.096 Sum_probs=173.3
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+.+|.+.+++.+.+.........+ . ..+...++.+.|++.+.... +.+.|+++++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~--~----~~~~~~~la~~l~~~~p~~~-~~v~f~~sGs 112 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAG--F----THEPAERLAQRLVALTPGGL-DHVFFSDSGS 112 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccc--c----CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 344677764 356789999999999987642111000 0 12334467888888875322 3899999999
Q ss_pred HHHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHHcC---------CEEEEEeCCCC--CCCCHHHHHHh
Q 017640 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKTG---------ANLKFLNLNDD--ESPDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~~g---------~~v~~v~~~~~--~~~d~~~l~~~ 204 (368)
+|++.+++..+... -..+.+|+..+.+||+.......+..... ..+..++...+ ...+++.+++.
T Consensus 113 eA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~ 192 (423)
T PRK05964 113 VAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEAL 192 (423)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHH
Confidence 99999998753210 02346899999999987655443321100 01223333211 11127788888
Q ss_pred cc---cCceEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCc
Q 017640 205 LS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKM 271 (368)
Q Consensus 205 l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~ 271 (368)
+. +++.+|+++. +++..|...+ +++|.++|++||+++|+||+|. +|.. ..+.....+|+++. +|.
T Consensus 193 l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~--~K~ 270 (423)
T PRK05964 193 LEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQAGVSPDIMCL--SKG 270 (423)
T ss_pred HHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhcCCCCCeeee--ehh
Confidence 84 3567888887 6888888876 8999999999999999999985 4321 11222345787655 597
Q ss_pred CCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 017640 272 CGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (368)
Q Consensus 272 ~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~a~~~al~~~~~~g~~~i~~ 347 (368)
++.. .+|+++.++++.+.+.+.. ++.. .+..+ +.+..+.+++.++++.+++. .+.+
T Consensus 271 l~gG~~p~~av~~~~~i~~~~~~~~-~~~~----------------~~~~~T~~~np~~~aaa~a~l~~l~~~---~~~~ 330 (423)
T PRK05964 271 LTGGYLPLAATLCTAEIFEAFYSDD-RAKA----------------FMHSPSYTANPLACAAANASLDLFEDE---PVLE 330 (423)
T ss_pred hhcCcccceEEEEcHHHHHhhhcCC-cccc----------------cccCCCCCcCHHHHHHHHHHHHHHHhc---CHHH
Confidence 6543 3888999999887664210 0000 01112 36777888888888888763 3567
Q ss_pred HHHHHHHHHHHHHHhh
Q 017640 348 YEVKWIICSIIVIQER 363 (368)
Q Consensus 348 ~~~~l~~~l~~~l~~~ 363 (368)
++.++.+++.+.|+++
T Consensus 331 ~~~~~g~~l~~~l~~l 346 (423)
T PRK05964 331 RVAALSAGLAEGLEPF 346 (423)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 8888888888877665
No 301
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.66 E-value=5.9e-16 Score=133.85 Aligned_cols=207 Identities=15% Similarity=0.190 Sum_probs=155.2
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
.+-|.....+.+..++++++.++.-. ...++ ..+...++++..|+++|.+.. +|++++|.++.++++
T Consensus 23 ~vDLRSDTvT~PTdeMr~am~eA~vg--------DdVyG--eD~tt~rLE~~vA~l~GKEAg---LFv~SGTmgNllaIm 89 (384)
T KOG1368|consen 23 SVDLRSDTVTVPTDEMRRAMAEASVG--------DDVYG--EDPTTNRLEQRVAELFGKEAG---LFVPSGTMGNLLAIM 89 (384)
T ss_pred ccccccccccCChHHHHHHHhhcccC--------ccccc--CCccHHHHHHHHHHHhCccce---eeecccccccHHHHH
Confidence 45666677778888888888765432 11111 133445899999999999854 888888999999998
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--------CceEEEEccccc
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--------KTKLVVIHHISN 219 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--------~~~~v~~~~~~n 219 (368)
.= --++|.+|++.+.+|--.+.. ..++...|+.++.+...+|+.+|++++|+++.. -+++||+++.+|
T Consensus 90 ~H---c~~rg~eii~gd~~HI~~~E~-gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~ 165 (384)
T KOG1368|consen 90 VH---CHQRGSEIIVGDRAHIHRYEQ-GGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHN 165 (384)
T ss_pred HH---hcCCCceEEeccchheeehhc-cChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccc
Confidence 74 145899999999988876643 234456688999999889999999999999973 369999999999
Q ss_pred ccc-cccCH---HHHHHHHHhcCCEEEEecCCcCCc-----ccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccC
Q 017640 220 MLA-SILPI---EEIVHWSHDVGAKVLVDACQSVPH-----MVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAM 290 (368)
Q Consensus 220 ~tG-~~~~l---~~i~~l~~~~g~~li~D~a~~~~~-----~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l 290 (368)
.+| .++|+ ++|.++|++||+.++.|++--+-. .++.---...|.+...+||.+|.|=..++++++++|++.
T Consensus 166 ~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSVsiCLSKglgAPVGSViVG~k~FI~kA 245 (384)
T KOG1368|consen 166 NCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSVSICLSKGLGAPVGSVIVGSKDFIDKA 245 (384)
T ss_pred ccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhhhhhhhccCCCCcccEEEccHHHHHHH
Confidence 888 99995 577889999999999999943211 122111124788888899988866457888899999765
Q ss_pred C
Q 017640 291 P 291 (368)
Q Consensus 291 ~ 291 (368)
+
T Consensus 246 ~ 246 (384)
T KOG1368|consen 246 R 246 (384)
T ss_pred H
Confidence 4
No 302
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.66 E-value=5.4e-14 Score=134.41 Aligned_cols=262 Identities=13% Similarity=0.099 Sum_probs=166.2
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEE-eC
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVF-TK 136 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~-t~ 136 (368)
++.-|+|.. ..|+.+|.+.+++.+.+..... .+.. . ...+...++.+.|++.+..+ ..+.++| ++
T Consensus 33 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~~-~----~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 106 (412)
T TIGR02407 33 DGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGI-IHSL-D----MATEAKREFLETFNEIILKPRGLDYKVQFPGP 106 (412)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccc-eecc-c----cCcHHHHHHHHHHHHhccCccCCCceEEEeCC
Confidence 445677763 3568899999999999875311 1110 0 01233446677777764222 1124666 48
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCCC---CCCHHHHHHh
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDDE---SPDLDKLKEM 204 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~~---~~d~~~l~~~ 204 (368)
++++|++.+++..+. ...+.+|+.....||+........... .+ ..+..+|...-. .-+++.+++.
T Consensus 107 sGseA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 184 (412)
T TIGR02407 107 TGTNAVESALKLARK--VTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKL 184 (412)
T ss_pred CchHHHHHHHHHHhh--hcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHH
Confidence 999999999997642 344568999999999876544433211 11 122334432100 0246678887
Q ss_pred cc------cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCc
Q 017640 205 LS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSH 269 (368)
Q Consensus 205 l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~ 269 (368)
+. +++.+|+++..++..|.+.| +++|.++|++||+++|+|++++ +|.. ..+.....+|+++. +
T Consensus 185 ~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~~--~ 262 (412)
T TIGR02407 185 LEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVCL--S 262 (412)
T ss_pred HHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEEe--c
Confidence 75 35689999999999998655 8999999999999999999986 4332 22333457898765 4
Q ss_pred CcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHhCHHHHH
Q 017640 270 KMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY-LSTIGMQKIH 346 (368)
Q Consensus 270 K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~-~~~~g~~~i~ 346 (368)
|.+|+.| +|++++++++ +.+.+...+ ...+.+..+.++..++++. +.+ ..+.
T Consensus 263 K~lg~~G~pigav~~~~~~-~~~~~~~~~---------------------~T~~gnpl~~aaa~a~l~~~i~~---~~l~ 317 (412)
T TIGR02407 263 KSISGYGLPLALTLIKPEL-DVWKPGEHN---------------------GTFRGNNLAFVTATAALEYYWSD---DAFE 317 (412)
T ss_pred hhccCCccceeEEEEchhh-hccCCCccC---------------------CCCCccHHHHHHHHHHHHHHhcc---cHHH
Confidence 9887755 8999998875 444322111 1114566666666777774 443 4556
Q ss_pred HHHHHHHHHHHHHHHh
Q 017640 347 AYEVKWIICSIIVIQE 362 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~ 362 (368)
+++.++.+++.+.+++
T Consensus 318 ~~~~~~g~~l~~~l~~ 333 (412)
T TIGR02407 318 KAVQRKSEIIQERLDR 333 (412)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777766654
No 303
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=1e-16 Score=144.79 Aligned_cols=192 Identities=17% Similarity=0.245 Sum_probs=142.7
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
+.+.+.+++.+... +.. +|+..+...++++.+++++|.+ ..+|++++|.|+.++++++ ++|++
T Consensus 7 ~~~~m~~a~~~a~~--------gd~--~Yg~D~~~~~l~~~i~~l~g~e---~a~f~~sGT~An~~al~~~----~~~~~ 69 (290)
T PF01212_consen 7 PTPAMLEAMAAANV--------GDD--AYGEDPTTARLEERIAELFGKE---AALFVPSGTMANQLALRAH----LRPGE 69 (290)
T ss_dssp S-HHEEHHHHHTTS--------B-C--CTTSSHHHHHHHHHHHHHHTSS---EEEEESSHHHHHHHHHHHH----HHTTE
T ss_pred CCHHHHHHHHcccc--------CCc--ccCCChhHHHHHHHHHHHcCCC---EEEEeCCCChHHHHHHHHH----HhcCC
Confidence 56677777743321 111 2444677789999999999997 5579999999999999998 78999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccccccc-ccccC---HH
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNML-ASILP---IE 228 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~t-G~~~~---l~ 228 (368)
.|++..+.|...... .......|.+++.++..++|.+|+++|++.+.. ++++|++++++|.. |.+++ ++
T Consensus 70 ~vi~~~~aHi~~~E~-ga~~~~~G~~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ 148 (290)
T PF01212_consen 70 SVICADTAHIHFDET-GAIEELSGAKLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELR 148 (290)
T ss_dssp EEEEETTEHHHHSST-THHHHHTTCEEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHH
T ss_pred ceeccccceeeeecc-chhhHhcCcEEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHH
Confidence 999999877654332 222345799999999876699999999999865 57999999999874 77888 67
Q ss_pred HHHHHHHhcCCEEEEecCCc------CCcccccCCCCCccEEEecCcCcCCCCcceEEEEccccccc
Q 017640 229 EIVHWSHDVGAKVLVDACQS------VPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSA 289 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~------~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~ 289 (368)
+|.++||+||+.++.|++-- .+..+-++. .++|.+..|++|.+|.++.++++.++++++.
T Consensus 149 ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~-~~~D~v~~~~tK~~g~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 149 AISELAREHGLPLHMDGARLANAAAALGVSLAEIA-AGADSVSFGGTKNGGAPGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH-TTSSEEEEETTSTT-SSSEEEEEESHHHHHH
T ss_pred HHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh-hhCCEEEEEEEcccccccceEEEechHHHHH
Confidence 88889999999999999932 122222232 3699999999998888777999999997654
No 304
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.66 E-value=3.6e-14 Score=136.12 Aligned_cols=262 Identities=14% Similarity=0.154 Sum_probs=166.7
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+.+|.+.+++++.+...... +.. ....+...++.+.|++++.....+.++|+++++
T Consensus 31 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~---~~~---~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 104 (420)
T TIGR00700 31 DGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHT---CFM---VTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGA 104 (420)
T ss_pred CCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCc---ccc---ccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 344577763 25678999999999998864211 100 011233346777788877532223899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-----cC-----CEEEEEeCCCCCC-------C----CH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-----ANLKFLNLNDDES-------P----DL 198 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-----~g-----~~v~~v~~~~~~~-------~----d~ 198 (368)
+|++.+++..+. ...+..|+....+||+.......+... .+ ..+..++...... . ++
T Consensus 105 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (420)
T TIGR00700 105 EAVENAVKIARS--YTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGEL 182 (420)
T ss_pred HHHHHHHHHHHH--hcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHH
Confidence 999999987532 344567888899999876544433210 01 0122333321000 0 24
Q ss_pred HHHHHhcc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEE
Q 017640 199 DKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFL 264 (368)
Q Consensus 199 ~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~ 264 (368)
+.+++.+. +++.+|+++..+..+|.+.| +++|.++|++||+++|+||+|. ++.. ..+.....+|++
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~ 262 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLI 262 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEE
Confidence 56666652 46799999999999999887 8999999999999999999987 3322 112223357766
Q ss_pred EecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 265 VASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 265 ~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
+ ++|.++ .| +|++++++++++.+.+...+. ..+.+..+.+++.++++.+.+.+
T Consensus 263 ~--lsK~l~-~G~pig~v~~~~~i~~~~~~~~~~~---------------------T~~~~pl~~aaa~a~l~~l~~~~- 317 (420)
T TIGR00700 263 T--TAKSLA-DGLPLSGVTGRAEIMDAPAPGGLGG---------------------TYAGNPLACAAALAVLAIIESEG- 317 (420)
T ss_pred E--eecccc-CCcceEEEEecHHHHhhcCCCCcCC---------------------CCCcCHHHHHHHHHHHHHHHhcc-
Confidence 5 679777 34 999999999887765432211 11456667777778888877643
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017640 343 QKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~ 362 (368)
+.++..++.+++.+.|.+
T Consensus 318 --~~~~~~~~g~~l~~~L~~ 335 (420)
T TIGR00700 318 --LIERARQIGRLVTDRLTT 335 (420)
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 444555555555555543
No 305
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.65 E-value=3.4e-14 Score=136.14 Aligned_cols=263 Identities=14% Similarity=0.170 Sum_probs=171.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+.++....... . . ...+...++.+.+++++.....+.++|+++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~-~----~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY-Q-I----VPYASYVTLAERINALAPIDGPAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc-c-c----cCChHHHHHHHHHHHhCCCCCCceEEEeCCcH
Confidence 3456777633 467899999999999886421111 0 0 01223346777788877543224889999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-cCC---------EEEEEeCCCCC-----CCCHHHHHHh
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-TGA---------NLKFLNLNDDE-----SPDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~---------~v~~v~~~~~~-----~~d~~~l~~~ 204 (368)
+|++.+++..+. ...+..|+.....||+.......+... ... .+..++..... ..+++.+++.
T Consensus 112 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 189 (421)
T PRK06777 112 EAVENAVKIARA--YTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERL 189 (421)
T ss_pred HHHHHHHHHHHH--hhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHH
Confidence 999999987632 344567888899999876544332110 000 11222221110 1135667777
Q ss_pred cc-----cCceEEEEcccccccccc-cC---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcC
Q 017640 205 LS-----RKTKLVVIHHISNMLASI-LP---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHK 270 (368)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~-~~---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K 270 (368)
+. +++.+|+++..++..|.. .| +++|.++|++||+++|+||+|. +|.. ........+|++ +++|
T Consensus 190 ~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK 267 (421)
T PRK06777 190 FKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLI--TMAK 267 (421)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEE--eeeh
Confidence 64 356899999999999965 44 8999999999999999999987 3221 111112357866 5679
Q ss_pred cCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 017640 271 MCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (368)
Q Consensus 271 ~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~ 348 (368)
.+| .| +|++++++++++.+.+...+. ....+....++..++++.+++ +.+.++
T Consensus 268 ~l~-~G~pigav~~~~~i~~~~~~~~~~~---------------------T~~~~p~~~aaa~a~L~~~~~---~~l~~~ 322 (421)
T PRK06777 268 SLG-GGMPISAVVGRAEVMDAPAPGGLGG---------------------TYAGNPLAVAAALAVLDVIAE---EKLCQR 322 (421)
T ss_pred hhc-CCCceEEEEEcHHHHhccCCCCCCC---------------------CCCcCHHHHHHHHHHHHHHHh---ccHHHH
Confidence 777 34 899999999887765432211 114577777888888887765 456778
Q ss_pred HHHHHHHHHHHHHhh
Q 017640 349 EVKWIICSIIVIQER 363 (368)
Q Consensus 349 ~~~l~~~l~~~l~~~ 363 (368)
.+++.+++.+.|+++
T Consensus 323 ~~~~g~~l~~~L~~l 337 (421)
T PRK06777 323 ALILGAHLVEVLEKA 337 (421)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888877764
No 306
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=2.2e-14 Score=138.29 Aligned_cols=262 Identities=16% Similarity=0.143 Sum_probs=170.9
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+....... .. ...+...++.+.|++.+.... +.+.|+++++
T Consensus 80 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~---~~----~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 151 (459)
T PRK11522 80 QGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHS---QE----LLDPLRAMLAKTLAALTPGKL-KYSFFCNSGT 151 (459)
T ss_pred CCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccc---cc----cCCHHHHHHHHHHHHhCCCCC-CEEEEeCCch
Confidence 344577763 356789999999999988652221 11 113444567888888775433 3899999999
Q ss_pred HHHHHHHHHccCCCCCC-CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC----CCCCHHHHHHhcc------cC
Q 017640 140 EAINLVAYSWGLSNLKS-GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD----ESPDLDKLKEMLS------RK 208 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~----~~~d~~~l~~~l~------~~ 208 (368)
+|++.+++..+...-++ +..|+.....||+..............+..+.|..++ ...|.+++++.++ .+
T Consensus 152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 231 (459)
T PRK11522 152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDD 231 (459)
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCc
Confidence 99999998753211112 3468888889998654333321110001001111111 0116788888775 35
Q ss_pred ceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC--cc
Q 017640 209 TKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT--GI 277 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~--G~ 277 (368)
+.+|+++......|.+.| ++++.++|++||+++|+||+|. +|.. ..+.....+|+++. +|.+|.. .+
T Consensus 232 iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt~--gK~lggG~~Pi 309 (459)
T PRK11522 232 VAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCL--AKALGGGVMPI 309 (459)
T ss_pred EEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEEEe--chhhhCCCccc
Confidence 689999999999999888 9999999999999999999985 3322 11222345898755 5976642 37
Q ss_pred eEEEEcccccccCC--CcccCCcceeecccCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 278 GFLFGKSDLLSAMP--PFLGGGEMISDVFLDHSTFADPPSRFEAGTP--AIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 278 G~l~~~~~li~~l~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~--~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
|.+++++++.+.+. +... .+|. |..+.++..++++.+++. .+.+++.++.
T Consensus 310 gav~~~~~i~~~~~~~~~~~-----------------------~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g 363 (459)
T PRK11522 310 GATIATEEVFSVLFDNPFLH-----------------------TTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKG 363 (459)
T ss_pred eeEEEcHHHHHHhccCCccc-----------------------CCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHH
Confidence 88888888766443 1111 1233 777778888888888763 4567888888
Q ss_pred HHHHHHHHhh
Q 017640 354 ICSIIVIQER 363 (368)
Q Consensus 354 ~~l~~~l~~~ 363 (368)
+++.+.|+++
T Consensus 364 ~~l~~~L~~l 373 (459)
T PRK11522 364 DYLLDGFRQL 373 (459)
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 307
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.65 E-value=6.1e-14 Score=134.39 Aligned_cols=263 Identities=14% Similarity=0.154 Sum_probs=167.6
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+.+...... +... ...+...++.+.|++.+.....+.++|+++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~-~~~~-----~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGs 111 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHT-AYQI-----VPYESYVTLAEKINALAPVSGQAKTAFFTTGA 111 (421)
T ss_pred CCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCc-ccCc-----cCCHHHHHHHHHHHHhCCCCCCceEEEeCChH
Confidence 4456777632 4678999999999998864211 1100 11233346777777776532223889999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-----cC-----CEEEEEeCCCC--CC---CCHHHHHHh
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-----ANLKFLNLNDD--ES---PDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-----~g-----~~v~~v~~~~~--~~---~d~~~l~~~ 204 (368)
+|++.+++..+. ...+.+|+....+||+.......+... .+ ..+..+|...+ +. -+++.+++.
T Consensus 112 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~ 189 (421)
T PRK09792 112 EAVENAVKIARA--HTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERL 189 (421)
T ss_pred HHHHHHHHHHHH--hcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHH
Confidence 999999987632 344567898999999865443332110 00 01233343211 11 134677777
Q ss_pred cc-----cCceEEEEccccccccccc-C---HHHHHHHHHhcCCEEEEecCCc-CCcc--cccCC--CCCccEEEecCcC
Q 017640 205 LS-----RKTKLVVIHHISNMLASIL-P---IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQ--GLDADFLVASSHK 270 (368)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~~-~---l~~i~~l~~~~g~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~s~~K 270 (368)
+. +++++|+++..++++|... | +++|.++|++||+++|+||++. ++.. .+... ...+|+ .+++|
T Consensus 190 ~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK 267 (421)
T PRK09792 190 FKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL--MTMAK 267 (421)
T ss_pred HHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE--EEeeh
Confidence 75 3578999999999999876 5 8999999999999999999977 3322 11111 235775 55679
Q ss_pred cCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 271 MCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 271 ~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
.+++ -.+|++++++++.+.+.+...+. ....+....++..+.++++++. .+.+++
T Consensus 268 ~l~~G~pigav~~~~~i~~~~~~~~~~~---------------------T~~gnpl~~aaa~a~l~~l~~~---~~~~~~ 323 (421)
T PRK09792 268 SLAGGMPLSGVVGNANIMDAPAPGGLGG---------------------TYAGNPLAVAAAHAVLNIIDKE---SLCERA 323 (421)
T ss_pred hhcCCCceEEEEEcHHHHhccCCCCcCC---------------------CCCCCHHHHHHHHHHHHHHHhh---hHHHHH
Confidence 7763 22899999999887765432211 1145666677777888888763 344555
Q ss_pred HHHHHHHHHHHHh
Q 017640 350 VKWIICSIIVIQE 362 (368)
Q Consensus 350 ~~l~~~l~~~l~~ 362 (368)
+++.+++.+.+.+
T Consensus 324 ~~~g~~l~~~l~~ 336 (421)
T PRK09792 324 NQLGQRLKNTLID 336 (421)
T ss_pred HHHHHHHHHHHHH
Confidence 5666666665554
No 308
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.64 E-value=7.6e-14 Score=134.64 Aligned_cols=263 Identities=12% Similarity=0.142 Sum_probs=170.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|..+ .|+..+.+.+++.++++... ..... ....+...++.+.+++.+.....+.++|+++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~-~~~~~-----~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGs 127 (443)
T PRK06058 54 DGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFT-HTCFM-----VTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGA 127 (443)
T ss_pred CCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhcc-Ccccc-----ccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 4556777743 56789999999999988642 11100 011244446777888877533223789999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-----cC-----CEEEEEeCCCCCC------C-------
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-----ANLKFLNLNDDES------P------- 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-----~g-----~~v~~v~~~~~~~------~------- 196 (368)
+|++.+++..+. ...+++|+....+||+.......+... .+ ..+..++....+. .
T Consensus 128 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (443)
T PRK06058 128 EAVENAVKIARS--YTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAA 205 (443)
T ss_pred HHHHHHHHHHHH--hhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHH
Confidence 999999986432 344578999999999876544332210 01 1122232211110 0
Q ss_pred -CHHHHHHhcc-cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEE
Q 017640 197 -DLDKLKEMLS-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLV 265 (368)
Q Consensus 197 -d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~ 265 (368)
.++.+++.+. +++++|+++..+...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+|+++
T Consensus 206 ~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~ 285 (443)
T PRK06058 206 RAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLIT 285 (443)
T ss_pred HHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEE
Confidence 1233444443 46789999988887787776 9999999999999999999986 4322 1122234689988
Q ss_pred ecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 266 ASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 266 ~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
.+ |.+|. | +|++++++++.+.+.+...+. ....|..+.+++.++++.+.+.
T Consensus 286 ~g--K~l~~-G~Pi~av~~~~~i~~~~~~~~~~~---------------------T~~gnpl~~aaa~a~L~~~~~~--- 338 (443)
T PRK06058 286 TA--KGIAG-GLPLSAVTGRAEIMDAPHPGGLGG---------------------TYGGNPVACAAALAAIETIEED--- 338 (443)
T ss_pred Ec--ccccC-CCccEEEEEcHHHHhhccCCCCCC---------------------CCCCCHHHHHHHHHHHHHHHHc---
Confidence 85 97762 4 899999999877765432211 1256777788888888887763
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 017640 344 KIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++..++.+++.+.|+++
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l 358 (443)
T PRK06058 339 DLVARARQIEALMTDRLRAL 358 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777654
No 309
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=5.7e-15 Score=127.93 Aligned_cols=215 Identities=13% Similarity=0.166 Sum_probs=141.2
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchh----hHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFL----SAKATDEYELARKKVAAFINAS-DSGEIVFTKNATE 140 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~ 140 (368)
++.+.|+.+.+.. -|++.+.+++...+.-.......... ..+...+++.+...+.+-+|.. .+++|.+|+|+..
T Consensus 30 ~g~imLggGNPa~-iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs 108 (417)
T COG3977 30 PGAIMLGGGNPAR-IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQS 108 (417)
T ss_pred CCceeeCCCCccc-ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccc
Confidence 5677887766554 44566666655554332211111111 1223455666666666666665 3459999999999
Q ss_pred HHHHHHHHccCCCCCCCC--EEEEc-CCCCcccHHHHHHHHHHcCCE-EEEEeCCC------C----CCCCHHHHHHhcc
Q 017640 141 AINLVAYSWGLSNLKSGD--EVILT-VAEHHSAIVPWQLVAQKTGAN-LKFLNLND------D----ESPDLDKLKEMLS 206 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd--~vl~~-~~~~~s~~~~~~~~~~~~g~~-v~~v~~~~------~----~~~d~~~l~~~l~ 206 (368)
+...+...|+-. ...|+ .|+++ .|+|-+.-+ + |.+ -.+|...+ . +.+|.+.|. +.
T Consensus 109 ~fFYlfNlF~G~-~sdG~~k~illPLaPeYiGY~d----~----~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~ 177 (417)
T COG3977 109 AFFYLFNLFAGR-RSDGTEKKILLPLAPEYIGYAD----A----GLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IG 177 (417)
T ss_pred hHHHHHHHhcCc-cCCCcceeEeeccChhhccccc----c----ccCccceeeccCCcccccccceeeccCHHHcc--cc
Confidence 999999887421 22333 45544 887777422 2 221 12222222 1 456777765 55
Q ss_pred cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcccccCCC----C-CccEEEecCcCcCCCCc--
Q 017640 207 RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQG----L-DADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~----~-~~d~~~~s~~K~~g~~G-- 276 (368)
+.+.+||++.|+||||.++. +.+|.+++++||+.+++|.+|+.+...+.+.+ + ...+.|.|+||. |.+|
T Consensus 178 e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~w~~NiilC~SLSK~-GLPG~R 256 (417)
T COG3977 178 ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPLWNENIILCMSLSKL-GLPGSR 256 (417)
T ss_pred cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccccccCCCCEEEEeehhhc-CCCCcc
Confidence 78899999999999999998 66778889999999999999997665443332 2 466888999996 4455
Q ss_pred ceEEEEcccccccCCCc
Q 017640 277 IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~ 293 (368)
+|+++.+++++..+...
T Consensus 257 ~GIiIane~viqaitnm 273 (417)
T COG3977 257 CGIIIANEKVIQAITNM 273 (417)
T ss_pred eeEEEccHHHHHHHHhc
Confidence 99999999998776644
No 310
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.64 E-value=3.9e-14 Score=128.80 Aligned_cols=244 Identities=15% Similarity=0.131 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-CHHHHH---HHHHHHccCCC-CCCCCEEEEcCCCCcccHHHHHHHHHHc
Q 017640 107 AKATDEYELARKKVAAFINASDSGEIVFTK-NATEAI---NLVAYSWGLSN-LKSGDEVILTVAEHHSAIVPWQLVAQKT 181 (368)
Q Consensus 107 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~-g~t~a~---~~~~~~~~~~~-~~~gd~vl~~~~~~~s~~~~~~~~~~~~ 181 (368)
.+..+++.+++++|.+..|.+ .|.+++ .+.++= .++++.+.... -..++++++++..|..+... +...
T Consensus 105 qG~l~li~~Lq~~L~~ITG~D---avsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPAS----Aam~ 177 (496)
T COG1003 105 QGYLELIYELQEWLKEITGMD---AVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPAS----AAMA 177 (496)
T ss_pred HHHHHHHHHHHHHHHHhcCCc---eeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhh----Hhhc
Confidence 456889999999999999997 566653 223333 33444442111 11346899999999987643 3456
Q ss_pred CCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc-CHHHHHHHHHhcCCEEEEecCCcCCcccc-cCCCC
Q 017640 182 GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL-PIEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGL 259 (368)
Q Consensus 182 g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~-~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~~~~ 259 (368)
|.+|+.|+.+++|.+|+++|++++.+++.++++++|++. |..- .+.+|+++.|++|..|..|++..-..+-+ ...++
T Consensus 178 G~~VV~V~~~~~G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~ 256 (496)
T COG1003 178 GFKVVVVKCDENGNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDM 256 (496)
T ss_pred CceEEEEecCCCCCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccccccc
Confidence 999999999999999999999999999999999999775 5443 49999999999999999999977554433 34567
Q ss_pred CccEEEecCcCcC------CCCcceEEEEcccccccCC-CcccCCcceeecccCCCCCCCCCCCCC--CCCCCHHHHHHH
Q 017640 260 DADFLVASSHKMC------GPTGIGFLFGKSDLLSAMP-PFLGGGEMISDVFLDHSTFADPPSRFE--AGTPAIGEAIGL 330 (368)
Q Consensus 260 ~~d~~~~s~~K~~------g~~G~G~l~~~~~li~~l~-~~~~g~~~~~~~~~~~~~~~~~~~~~~--~gt~~~~~~~a~ 330 (368)
+.|++-.++||.| |++|.|=+.++..+...+. |... ........++. ....-.+.. .|+.++ +.-.
T Consensus 257 G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~--~~~~~y~~~~~-~~~s~g~~~a~~Gs~~i--l~~a 331 (496)
T COG1003 257 GFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVY--HDVGEYRLDYD-GKKSIGVSAAPYGSASI--LPIA 331 (496)
T ss_pred ccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCccc--CCCccccccCC-CCccceeeccccCcchH--HHHH
Confidence 8999999999965 2445888889988877665 2211 00000000100 001111111 222222 2233
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 331 GAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 331 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...+..+-..|++...+...-.++|+..+|+..
T Consensus 332 ~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~ 364 (496)
T COG1003 332 WAYIRMMGADGLKQASEVAVLNANYIARRLKGY 364 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc
Confidence 444555555688899999999999999999853
No 311
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.64 E-value=8.3e-14 Score=133.70 Aligned_cols=262 Identities=13% Similarity=0.105 Sum_probs=163.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEE-eC
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVF-TK 136 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~-t~ 136 (368)
++.-|+|.. ..|+.+|.+.+++++++..... .+. ... ..+...++.+.+++.+..+ .++.++| ++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~-~~~-~~~----~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~ 110 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGI-THG-LDM----HTTAKREFLETFEETILKPRGLDYKVQFTGP 110 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccc-ccc-ccc----CcHHHHHHHHHHHHhhcCCcCCCceEEEeCC
Confidence 344577763 3567899999999998875311 111 001 1233445677777765322 1125666 48
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCCC---CCCHHHHHHh
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDDE---SPDLDKLKEM 204 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~~---~~d~~~l~~~ 204 (368)
|+++|++.+++..+. ...+.+|+....+||+........... .+ ..+..+|..... .-|++.+++.
T Consensus 111 sGseA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 111 TGTNAVEAALKLARK--VTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CHHHHHHHHHHHHHH--hcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 999999999997642 344567888899999865433332110 01 123444443110 1267788888
Q ss_pred ccc------CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCc---c-cccCCCCCccEEEecCc
Q 017640 205 LSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPH---M-VVDVQGLDADFLVASSH 269 (368)
Q Consensus 205 l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~---~-~~~~~~~~~d~~~~s~~ 269 (368)
+.. ++.+|+++.+....|.+.+ +++|.++|++||+++|+||+|+ +|. . ..+.....+|+++. +
T Consensus 189 l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~t~--~ 266 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIVTL--S 266 (425)
T ss_pred HHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEEEe--c
Confidence 742 4689999999998887654 8999999999999999999986 321 1 22223346887765 5
Q ss_pred CcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHHHhCHHHHH
Q 017640 270 KMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAI-DYLSTIGMQKIH 346 (368)
Q Consensus 270 K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al-~~~~~~g~~~i~ 346 (368)
|.+|+.| +|++++++++ ..+.+...+ .. .+.+..+.++..+++ +++.+ ..+.
T Consensus 267 K~l~~~G~pigav~~~~~i-~~~~~~~~~------------------~T---~~gnp~~~aaa~a~l~~~~~~---~~l~ 321 (425)
T PRK09264 267 KSISGYGLPMALVLIKPEL-DVWKPGEHN------------------GT---FRGNNLAFVTATAALEEYWSD---DAFE 321 (425)
T ss_pred cccCCCccceEEEEEchhh-hccCCCccC------------------CC---CCCCHHHHHHHHHHHHHHHhh---hHHH
Confidence 9888766 7999999886 333221111 11 134455556666666 44333 4566
Q ss_pred HHHHHHHHHHHHHHHh
Q 017640 347 AYEVKWIICSIIVIQE 362 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~ 362 (368)
++++++.+++.+.+++
T Consensus 322 ~~~~~~g~~l~~~l~~ 337 (425)
T PRK09264 322 KEVKAKGELVRERLEE 337 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777776654
No 312
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=6.1e-14 Score=133.62 Aligned_cols=260 Identities=12% Similarity=0.072 Sum_probs=160.8
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+...... +... ..+...++.+.|.+..+.. +.+.|++|++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~~~~----~~~~~~~la~~L~~~~~~~--~~v~f~~sGs 108 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHT---SNVF----YSAPPLKLAEELVTASRFA--EKVFLCNSGT 108 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccc---cccc----CCHHHHHHHHHHHhhCCCC--CEEEEcCchH
Confidence 455677763 35678999999999988764211 1111 1223346777777765432 4899999999
Q ss_pred HHHHHHHHHccCCC--CC---CCCEEEEcCCCCcccHHHHHHHHHHc----CC-----EEEEEeCCCCCCCCHHHHHHhc
Q 017640 140 EAINLVAYSWGLSN--LK---SGDEVILTVAEHHSAIVPWQLVAQKT----GA-----NLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 140 ~a~~~~~~~~~~~~--~~---~gd~vl~~~~~~~s~~~~~~~~~~~~----g~-----~v~~v~~~~~~~~d~~~l~~~l 205 (368)
+|++.+++..+... .. .+.+|+....+||+............ +. .+..++. .|++.+++.+
T Consensus 109 eA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~ 183 (408)
T PRK04612 109 EANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-----NDVEALEAAM 183 (408)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-----CCHHHHHHhh
Confidence 99999998753210 01 13468999999998754433221100 00 1112222 2788999888
Q ss_pred cc-CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc--ccCCCCCccEEEecCcCcCCCC-c
Q 017640 206 SR-KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQGLDADFLVASSHKMCGPT-G 276 (368)
Q Consensus 206 ~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--~~~~~~~~d~~~~s~~K~~g~~-G 276 (368)
.+ ++.+|+++..+...|.+.+ +++|.++|++||+++|+||+|. +|... +.....+....+.+++|.+|+. .
T Consensus 184 ~~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~t~~K~l~~G~p 263 (408)
T PRK04612 184 AGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIVTLAKALGGGFP 263 (408)
T ss_pred CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEEEEcchhcCCCc
Confidence 64 4456666655444444443 8899999999999999999987 33221 1111223344455667977631 2
Q ss_pred ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
+|++++++++.+.+.....+ ..| +.+.....++.++++.+++ +.+.+++.++.+++
T Consensus 264 iga~~~~~~~~~~~~~~~~~------------------~t~---~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l 319 (408)
T PRK04612 264 IGAMLAGPKVAETMQFGAHG------------------TTF---GGNPLAAAVARVALRKLAS---PQIAANVARQSAAL 319 (408)
T ss_pred eEEEEECHHHHhhhcCCCcC------------------CCC---CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHH
Confidence 89999888877666532211 111 4567777778888888876 34567777777777
Q ss_pred HHHHHhh
Q 017640 357 IIVIQER 363 (368)
Q Consensus 357 ~~~l~~~ 363 (368)
.+.|++.
T Consensus 320 ~~~l~~l 326 (408)
T PRK04612 320 RAGLEAL 326 (408)
T ss_pred HHHHHHH
Confidence 7776653
No 313
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.63 E-value=1.5e-13 Score=131.63 Aligned_cols=264 Identities=13% Similarity=0.131 Sum_probs=167.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+.+..+...... ....+...++.+.+++.+.....+.++|+++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~------~~~~~~~~~la~~l~~~~p~~~~~~v~f~~SGs 111 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQ------VVPYENYVRLAERLNALVPGDFAKKTIFVTTGA 111 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccC------ccCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 4456787633 4688999999999998864211110 011234446777788877533223899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH---c--C-----CEEEEEeCCCC--CC---CCHHHHHHh
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK---T--G-----ANLKFLNLNDD--ES---PDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~---~--g-----~~v~~v~~~~~--~~---~d~~~l~~~ 204 (368)
+|++.+++..+. ...+.+|+.....||+.......+... . + ..+..+|.+.+ +. -+++.+++.
T Consensus 112 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~ 189 (425)
T PRK07495 112 EAVENAVKIARA--ATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKL 189 (425)
T ss_pred HHHHHHHHHHHH--hhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHHHHHHHHHH
Confidence 999999987532 344567888898898865332222100 0 0 12344444321 11 124455666
Q ss_pred cc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc--ccCC--CCCccEEEecCcC
Q 017640 205 LS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQ--GLDADFLVASSHK 270 (368)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--~~~~--~~~~d~~~~s~~K 270 (368)
+. .++++|+++.....+|.+.+ +++|.++|++||+++|+|++|. +|... +..+ ...+|+ .+++|
T Consensus 190 ~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv~pDi--~tlsK 267 (425)
T PRK07495 190 FKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAADL--TTMAK 267 (425)
T ss_pred HHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecccCCCCCE--Eeehh
Confidence 53 35788999988877886544 8999999999999999999987 32221 1122 234565 55569
Q ss_pred cCCCC-cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 271 MCGPT-GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 271 ~~g~~-G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
.+++. .+|++++++++.+.+.+...+ .....+....++..++++++++. .+.++.
T Consensus 268 ~l~~G~pigav~~~~~i~~~~~~~~~~---------------------~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~ 323 (425)
T PRK07495 268 GLAGGFPLAAVTGRAEIMDAPGPGGLG---------------------GTYGGNPLGIAAAHAVLDVIEEE---DLCERA 323 (425)
T ss_pred hhcCCccceEEEEcHHHHhccCCCCcC---------------------CCCCCCHHHHHHHHHHHHHHHhc---hHHHHH
Confidence 66532 289999999988776543211 11245666777777888888763 455666
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
+++.+++.+.+++.
T Consensus 324 ~~~g~~l~~~L~~l 337 (425)
T PRK07495 324 NQLGNRLKQRLASL 337 (425)
T ss_pred HHHHHHHHHHHHHH
Confidence 66767766666543
No 314
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.62 E-value=3.7e-14 Score=130.02 Aligned_cols=241 Identities=16% Similarity=0.075 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC-CC---CEEEEcCCCCcccHHHHHHHHHHcCC
Q 017640 108 KATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK-SG---DEVILTVAEHHSAIVPWQLVAQKTGA 183 (368)
Q Consensus 108 ~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~-~g---d~vl~~~~~~~s~~~~~~~~~~~~g~ 183 (368)
...++..++-+.++.+|+.+++..-.-|.|+|+++.++-..+.....+ .| -.++.+.. +..+|.++++..+.
T Consensus 117 ~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~----v~~a~eK~a~yf~v 192 (491)
T KOG1383|consen 117 VVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN----VHAAFEKAARYFEV 192 (491)
T ss_pred hhHHHHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHH----HHHHHHHHHhhEEE
Confidence 346777889999999999996544477889999966666554211112 11 24555555 56679999999999
Q ss_pred EEEEEeCC-CCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh-cCCEEEEecCCcCCcc--------c
Q 017640 184 NLKFLNLN-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD-VGAKVLVDACQSVPHM--------V 253 (368)
Q Consensus 184 ~v~~v~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~-~g~~li~D~a~~~~~~--------~ 253 (368)
+++.||++ .++.+|+..+.+.++++|.+++.+.++.|+|.+.|+++|.++..+ +++.+++|++.+-... +
T Consensus 193 ~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~ 272 (491)
T KOG1383|consen 193 ELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEE 272 (491)
T ss_pred EEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccc
Confidence 99999999 568999999999999999999999999999999999999999998 9999999999873332 4
Q ss_pred ccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCC----CcccCCcceeecccCCCCCCCCCCCCC-CCCCCHHHH
Q 017640 254 VDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMP----PFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGEA 327 (368)
Q Consensus 254 ~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~----~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~~ 327 (368)
+|+...+...+..+.|| .|.|.|.++++.+.+-+..-+ .-..||-. ..+. .|+.+-..+
T Consensus 273 fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y---------------~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 273 FDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIY---------------ASPTLNGSRPGSQV 337 (491)
T ss_pred cccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccc---------------cCcccccCCcccHH
Confidence 55666678889999999 789999998887765321111 11112111 1222 456666677
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 328 IGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 328 ~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
++..+++-.+...|.....+.+.+.+..+++.|+++.+++
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~ 377 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIK 377 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccce
Confidence 7777777777888999999999999999999999988765
No 315
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.62 E-value=4.8e-14 Score=128.26 Aligned_cols=284 Identities=15% Similarity=0.140 Sum_probs=201.5
Q ss_pred EEeccCCCCCCcHHHHH-HHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLK-ALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
-|++.+.++..-|.++. .+.+.-..+..+... +..-+++..+.+-+.+..++++.|.+-. +--+-.++|.+-+.++.
T Consensus 78 sfiG~GyY~~~~P~vI~rnile~pewyTaYTPY-QpEISQGrLqaLfefQtlv~dLTGm~VA-NASm~DeaTAaAEAm~m 155 (450)
T COG0403 78 SFIGAGYYDTYTPPVILRNILENPEWYTAYTPY-QPEISQGRLEALFEFQTLVADLTGLDVA-NASMLDEATAAAEAMLM 155 (450)
T ss_pred hhccCcccCCcCcHHHHHHhhcCccccccCCCC-chhhhhHHHHHHHHHHHHHHHHhCCCcc-cchhhhhHHHHHHHHHH
Confidence 37888888854444444 555433333233221 3345667788888999999999999854 55666788888888887
Q ss_pred HccCCCCCC--CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc-cc
Q 017640 148 SWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA-SI 224 (368)
Q Consensus 148 ~~~~~~~~~--gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG-~~ 224 (368)
+.+ ..+ .++++++...|+....-++..++..|.+++.++.+ |+++|+++...++..+++..|+ ..| ..
T Consensus 156 a~r---~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~~~~~~~~gv~vQyP~-~~G~~~ 226 (450)
T COG0403 156 AKR---VTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLESADDGDVFGVLVQYPN-TFGIVE 226 (450)
T ss_pred HHH---hhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhhccccCeEEEEEecCC-CCCccc
Confidence 773 333 67999999999999999999988889999988877 8889998833478999999996 466 66
Q ss_pred cCHHHHHHHHHhcCCEEEEecC-CcCCcccccCCCCCccEEEecCcCc-----CCCCcceEEEEcccccccCCCcccCCc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDAC-QSVPHMVVDVQGLDADFLVASSHKM-----CGPTGIGFLFGKSDLLSAMPPFLGGGE 298 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a-~~~~~~~~~~~~~~~d~~~~s~~K~-----~g~~G~G~l~~~~~li~~l~~~~~g~~ 298 (368)
.++++|.+.+|++|.++++=.- -+++.+ -....++.|+++++.+.+ ||+|-+|++.+++++.+++...+.|-+
T Consensus 227 ~d~~~l~~~~h~~~al~~v~aDplaL~LL-~pPGe~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S 305 (450)
T COG0403 227 EDLRALIEAAHSAGALVIVAADPLALGLL-KPPGEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVS 305 (450)
T ss_pred hhHHHHHHHHhhcCCEEEEEechhHhhcc-CCccccCCceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeee
Confidence 6699999999999987765322 222222 134567999999999984 555559999999999988887777644
Q ss_pred ceeecccCC-CCC--CCCCCCCCCCCCCHHHHH---HHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 299 MISDVFLDH-STF--ADPPSRFEAGTPAIGEAI---GLGA--AIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 299 ~~~~~~~~~-~~~--~~~~~~~~~gt~~~~~~~---a~~~--al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.-..-...+ ..+ .+.+-|.+-.|.|+..-- |+.+ ...++-..|+++|.+++.+++.++.++|+++.
T Consensus 306 ~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~ 379 (450)
T COG0403 306 VDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIG 379 (450)
T ss_pred ecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 321111100 011 234457777788886433 2222 23355566899999999999999999999764
No 316
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.62 E-value=1.1e-14 Score=144.14 Aligned_cols=222 Identities=12% Similarity=0.075 Sum_probs=163.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
.+.+.++..|+.||++. ..++++|+|.++..++.+. +++||.|++...+|.|++.++ ...|+++++++..
T Consensus 196 ~i~eAe~~AA~~fgAd~--tyfvvNGTS~~n~av~~a~----~~~Gd~VLvdRN~HKSv~haL----ilsga~PVYl~P~ 265 (714)
T PRK15400 196 PHKEAEEYIARVFNADR--SYMVTNGTSTANKIVGMYS----APAGSTVLIDRNCHKSLTHLM----MMSDVTPIYFRPT 265 (714)
T ss_pred HHHHHHHHHHHHhCCCc--EEEEeCchHHHHHHHHHHh----cCCCCEEEeecccHHHHHHHH----HHcCCeEEEeccc
Confidence 56789999999999983 6788899999999999988 899999999999999987643 4559999999876
Q ss_pred CC-----CCCC-----HHHHHHhcccCc--e---EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCc--ccc
Q 017640 192 DD-----ESPD-----LDKLKEMLSRKT--K---LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH--MVV 254 (368)
Q Consensus 192 ~~-----~~~d-----~~~l~~~l~~~~--~---~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~--~~~ 254 (368)
.+ +.++ .+.+++++...+ + .++++++ +..|.++++++|+++|+.++ +++|+||+.-. .+.
T Consensus 266 rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred ccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 43 3445 789999986532 3 6888888 66899999999999999887 79999988321 111
Q ss_pred --cCCC--CCc---c--EEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCH
Q 017640 255 --DVQG--LDA---D--FLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAI 324 (368)
Q Consensus 255 --~~~~--~~~---d--~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 324 (368)
+... .+. | +++-|.||.++ ....++|.++.. ++. ..+ ...-.-+.+.+|++
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~--~~~----------------n~a~~m~~STSPsY 403 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNE--ETF----------------NEAYMMHTTTSPHY 403 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCH--HHH----------------HHHHHHHcCCCcHH
Confidence 0111 122 4 88899999665 555677765443 110 000 00002345668999
Q ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 325 GEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 325 ~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+.++++..+..++.....+.+.+...+++..+++.|.++.+
T Consensus 404 ~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~ 444 (714)
T PRK15400 404 GIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRT 444 (714)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999998644466778888888888888877654
No 317
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=4.1e-13 Score=129.36 Aligned_cols=264 Identities=14% Similarity=0.133 Sum_probs=168.6
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.++++........ . ...+...++.+.|++.+.....+.|.|+++++
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~--~----~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGs 113 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA--Y----MYHEPLVRLAKKLCELAPGDFEKRVTFGLSGS 113 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc--c----cCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 344577763 35678999999999998764221110 0 11244457888888887543223899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-------cC---CEEEEEeCCCCC-----CCC-------
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-------TG---ANLKFLNLNDDE-----SPD------- 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-------~g---~~v~~v~~~~~~-----~~d------- 197 (368)
+|++.+++..+. ...+..|+..+..||+.......+... .+ ..+..+|..... ..+
T Consensus 114 eA~e~AiklAr~--~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK08593 114 DANDGIIKFARA--YTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEY 191 (445)
T ss_pred HHHHHHHHHHHH--hhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHH
Confidence 999999986532 334557888888888865433322210 00 113334432111 011
Q ss_pred HHHHHHhcc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCccE
Q 017640 198 LDKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADF 263 (368)
Q Consensus 198 ~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~d~ 263 (368)
++.+++.+. +++.+|+++.+.+..|.+.| +++|.++|++||+++|+||++. +|..- .+.....+|+
T Consensus 192 ~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi 271 (445)
T PRK08593 192 LAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDL 271 (445)
T ss_pred HHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCE
Confidence 234444442 46799999999999998877 9999999999999999999984 54321 1222335787
Q ss_pred EEecCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 264 LVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 264 ~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
++ ++|.+|. ..+|++++++++++.+.+... .+ ....+..+.++..++++.+++.
T Consensus 272 ~t--~gK~l~~G~p~gav~~~~~i~~~~~~~~~--------------------~~-T~~~~pl~~aaa~a~l~~l~~~-- 326 (445)
T PRK08593 272 MS--FGKSLAGGMPMSAIVGRKEIMESLEAPAH--------------------LF-TTGANPVSCAAALATIDMIEDE-- 326 (445)
T ss_pred ee--ecccccCCcccEEEEEcHHHHhhhccCCC--------------------CC-CCCCCHHHHHHHHHHHHHHHhc--
Confidence 75 5696652 228999999998876642211 11 1245566777788888888763
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 017640 343 QKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++.+++.+++.+.|+++
T Consensus 327 -~l~~~~~~~g~~l~~~L~~l 346 (445)
T PRK08593 327 -SLLQRSAEKGEYARKRFDQW 346 (445)
T ss_pred -cHHHHHHHHHHHHHHHHHHH
Confidence 45667777777777777653
No 318
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.61 E-value=1.5e-13 Score=129.49 Aligned_cols=218 Identities=17% Similarity=0.143 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC--
Q 017640 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-- 190 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-- 190 (368)
..++++.+++++|.+ .+++++++|.|++++.. + .+++||+| +...|.... .......|+..+-+..
T Consensus 80 ~~~LE~~vAe~lG~e---~aV~v~sGTaAl~ll~~-l---~v~pGd~V--p~n~~f~Tt---~ahI~~~Ga~fvDi~~d~ 147 (460)
T PRK13237 80 FYHLEETVQEYYGFK---HVVPTHQGRGAENLLSR-I---AIKPGQYV--PGNMYFTTT---RYHQELNGGIFVDIIIDE 147 (460)
T ss_pred HHHHHHHHHHHHCCC---eEEEeCCHHHHHHHHHH-h---CCCCcCEE--CCccchHhh---HHHHHhCCcEEEeeeccc
Confidence 448999999999997 68999999999998644 4 38999975 444444433 3323555775444421
Q ss_pred --------CCCCCCCHHHHHHhcccC----ceEEEEccccccc-ccccC---HHHHHHHHHhcCCEEEEecCCcCCcc--
Q 017640 191 --------NDDESPDLDKLKEMLSRK----TKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-- 252 (368)
Q Consensus 191 --------~~~~~~d~~~l~~~l~~~----~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-- 252 (368)
..+|.+|++.|+++|+++ +++|++..++|.. |...| +++|.++|++||+.||.|+++.++..
T Consensus 148 a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~f 227 (460)
T PRK13237 148 AHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYF 227 (460)
T ss_pred ccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhh
Confidence 235889999999999753 3567777777877 67764 79999999999999999999998732
Q ss_pred ---------cccCC------CCCccEEEecCcCcCC-CCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCC
Q 017640 253 ---------VVDVQ------GLDADFLVASSHKMCG-PTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPS 315 (368)
Q Consensus 253 ---------~~~~~------~~~~d~~~~s~~K~~g-~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 315 (368)
..++. ....|.+++|++|.++ +.| |+++.++ ++.++++....-. .
T Consensus 228 I~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~G-G~i~t~D~eL~~~~r~~~~~~-----------------e 289 (460)
T PRK13237 228 IKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNIG-GFLAMNDEELFDEAKELVVVY-----------------E 289 (460)
T ss_pred hcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCCc-eEEEECCHHHHHHHHHhcccc-----------------C
Confidence 11110 1147999999999655 444 7776655 5666665442100 0
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 316 RFE-AGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 316 ~~~-~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.|. .|....--+.+++.++....+ . ....+.-+..+++.+.|.+.
T Consensus 290 G~~tygg~~grd~~alAvgl~E~~~--~-~y~~~ri~~~~~l~~~L~~~ 335 (460)
T PRK13237 290 GMPSYGGMAGRDMEAMAIGIEESVQ--Y-EYIEHRVGQVRYLGEKLLAA 335 (460)
T ss_pred CCcCCCChhhhHHHHHHhHHHhhch--H-HHHHHHHHHHHHHHHHHHHC
Confidence 110 112222234455555554333 2 33344445677888887654
No 319
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.61 E-value=8.8e-14 Score=135.42 Aligned_cols=271 Identities=12% Similarity=0.033 Sum_probs=168.6
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|..+|.+.+++.+++..+..... . . ....+...++.+.|.+.+....-+.+.|+++++
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~--~-~--~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGs 161 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHS--F-W--NRTTKPSLDLAKELLEMFTARKMGKVFFTNSGS 161 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceec--c-c--ccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChH
Confidence 344677743 3567899999999999886421110 0 0 011344456778877775422223789999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHHHcCCE------------EEEEeCCCCCC--------
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQKTGAN------------LKFLNLNDDES-------- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~------------v~~v~~~~~~~-------- 195 (368)
+|+..+++...... - ..+..|+..+..||+.......+ .|.. +..++.+..+.
T Consensus 162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~sl---sg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 238 (504)
T PLN02760 162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASL---SGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETE 238 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhc---cCChhhccCCCCCCCCcEEeCCCcccccCCCCCcH
Confidence 99999998762110 1 12357888888888764322211 1211 11222110000
Q ss_pred -----CCHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCC-cCCccc----ccCC
Q 017640 196 -----PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMV----VDVQ 257 (368)
Q Consensus 196 -----~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~-~~~~~~----~~~~ 257 (368)
...++|++.+. +++.+|+++.+....|.+.| +++|.++|++||+++|+||++ ++|..- .+..
T Consensus 239 ~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~ 318 (504)
T PLN02760 239 EEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKY 318 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhc
Confidence 01245666663 35789999999999999988 999999999999999999999 565431 1222
Q ss_pred CCCccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 017640 258 GLDADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID 335 (368)
Q Consensus 258 ~~~~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~ 335 (368)
...+|+++.+ |.+|.. .+|.+++++++.+.+.+.....+.. ......+.+..+.++..++++
T Consensus 319 gv~PDivtlg--K~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~--------------~h~~T~~gnPl~~Aaala~Le 382 (504)
T PLN02760 319 NIKPDLVSLA--KALSSAYMPIGAVLVSPEISDVIHSQSNKLGSF--------------AHGFTYSGHPVSCAVALEALK 382 (504)
T ss_pred CCCCcEEEec--ccccCCccccceEeecHHHHhhhhcccccccCc--------------ccCCCCCCCHHHHHHHHHHHH
Confidence 3458876665 976542 3788999998877665321100000 000111346777777888888
Q ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 336 YLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 336 ~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+++. .+.++++++.+++.+.|++.
T Consensus 383 ~i~~~---~l~~~~~~~g~~l~~~L~~l 407 (504)
T PLN02760 383 IYKER---NIPEHVNKIAPRFQDGIKAF 407 (504)
T ss_pred HHHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 88763 45778888888888877654
No 320
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.61 E-value=5.2e-14 Score=139.37 Aligned_cols=220 Identities=12% Similarity=0.063 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
.+.+.++.+|+.||++. ..++++|+|.++..++.+. +++||.|++...+|.|++.++ ...|+++++++..
T Consensus 196 ~i~eAe~~aA~~fgAd~--tyfvvNGTS~~n~av~~a~----~~~Gd~VLvdRN~HKSv~~aL----ilsga~PVYl~P~ 265 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQ--SYIVTNGTSTSNKIVGMYA----APAGSTLLIDRNCHKSLAHLL----MMSDVVPIWLKPT 265 (713)
T ss_pred HHHHHHHHHHHHhCCCc--EEEEeCChHHHHHHHHHHh----cCCCCEEEeecccHHHHHHHH----HHcCCeeEEeccc
Confidence 46688999999999973 6788899999999999998 999999999999999987643 4559999999866
Q ss_pred CC-----CCCCH-----HHHHHhcccC-----ceEEEEcccccccccccCHHHHHHHHHhcCCEE-EEecCCcCC--ccc
Q 017640 192 DD-----ESPDL-----DKLKEMLSRK-----TKLVVIHHISNMLASILPIEEIVHWSHDVGAKV-LVDACQSVP--HMV 253 (368)
Q Consensus 192 ~~-----~~~d~-----~~l~~~l~~~-----~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~l-i~D~a~~~~--~~~ 253 (368)
.+ +.++. +.+++++.+. ++.++++++ +..|.++++++|++.| |+.+ ++|+||+.- ..+
T Consensus 266 ~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 266 RNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred ccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 43 34555 8888888642 367888888 6689999999999999 6665 699998831 112
Q ss_pred c--cCCCC----CccEE---EecCcCcCC-CCcceEEEEccccc-ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCC
Q 017640 254 V--DVQGL----DADFL---VASSHKMCG-PTGIGFLFGKSDLL-SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTP 322 (368)
Q Consensus 254 ~--~~~~~----~~d~~---~~s~~K~~g-~~G~G~l~~~~~li-~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~ 322 (368)
. +.... +.|.+ +-|.||.++ ....+++.++..+- +++...+ .-+.+.+|
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~--------------------~m~~STSP 401 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAF--------------------MMHTSTSP 401 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHH--------------------HHHcCCCc
Confidence 1 11111 35665 889999665 55588887755321 0111100 23456689
Q ss_pred CHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 323 AIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 323 ~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+++.++++..+..++.....+.+.++..+++..+++.|.++.+
T Consensus 402 sY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~ 444 (713)
T PRK15399 402 SYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLRE 444 (713)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999998633466778888888888888877654
No 321
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=1e-13 Score=133.23 Aligned_cols=246 Identities=13% Similarity=0.085 Sum_probs=161.4
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.|..++.+.+++.+.+.... ... . ..+...++.+.+++.+.- . +.++|++|+++|+..+++.... ..
T Consensus 64 lGh~~p~i~~a~~~~~~~~~---~~~--~----~~~~~~~la~~L~~~~~~-~-~~v~~~~sGseA~e~Aik~a~~--~~ 130 (426)
T PRK00062 64 LGHAHPEVVEAVIEAAEKGL---SFG--A----PTELEVELAELVIELVPS-I-EMVRMVNSGTEATMSAIRLARG--YT 130 (426)
T ss_pred cCCCCHHHHHHHHHHHHhCC---cCC--C----CCHHHHHHHHHHHHhCCC-C-CEEEEecCHHHHHHHHHHHHHH--Hh
Confidence 45789999999999987621 111 1 123445788888887642 2 3899999999999999997521 33
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHH----cC-----CE-------EEEEeCCCCCCCCHHHHHHhcc---cCceEEEEcc
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQK----TG-----AN-------LKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHH 216 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~----~g-----~~-------v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~ 216 (368)
.++.|+..++.||+........... .+ .. ...++. .|++.+++.+. +++++|+++.
T Consensus 131 g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aaiivEp 205 (426)
T PRK00062 131 GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPY-----NDLEAVEELFEEYGDEIAAVIVEP 205 (426)
T ss_pred CCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCC-----CCHHHHHHHHHhCCCcEEEEEEeC
Confidence 4678999999999865333222100 00 00 111111 27888888875 3678999998
Q ss_pred cccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcc----cccCCCCCccEEEecCcCcCCCC-cceEEEEccccc
Q 017640 217 ISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLL 287 (368)
Q Consensus 217 ~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~~~~~d~~~~s~~K~~g~~-G~G~l~~~~~li 287 (368)
....+|.+.| +++|.++|++||+++|+||+|.-... ..+.....+|+ .+++|.+|.. .+|+++++++++
T Consensus 206 v~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi--~~~gK~l~~G~p~ga~~~~~~i~ 283 (426)
T PRK00062 206 VAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDL--TTLGKIIGGGLPVGAFGGRREIM 283 (426)
T ss_pred CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcch--HhhhhHhhCCCcceeeeEHHHHH
Confidence 8888999998 99999999999999999999872111 01111224675 4667976621 278899999988
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
+.+.+... . ..+...+.+....+++.++++.+.+. .+.++++++.+++.+.|.+
T Consensus 284 ~~~~~~~~---~---------------~~~~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~ 337 (426)
T PRK00062 284 EQLAPLGP---V---------------YQAGTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKE 337 (426)
T ss_pred HhhccCCC---c---------------eecccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHH
Confidence 87752110 0 01111246666777788888887663 4566666777777666654
No 322
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.60 E-value=2.2e-13 Score=131.52 Aligned_cols=253 Identities=18% Similarity=0.169 Sum_probs=166.3
Q ss_pred CeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+--|+|.. ..|+.+|.+.+++.+.+...... +. ..+...++.+.|.+.+.. .+.|.|++++|+
T Consensus 98 G~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~---~~------~~~~~~~lAe~l~~~~p~--~~~v~f~~SGsE 166 (474)
T PLN02482 98 GNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSF---GA------PCLLENVLAEMVIDAVPS--VEMVRFVNSGTE 166 (474)
T ss_pred CCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCC---CC------CCHHHHHHHHHHHHhCCC--CCEEEEeCChHH
Confidence 44567763 25577899999999998864211 11 123344677777777643 248999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----------cCC------EEEEEeCCCCCCCCHHHHHHh
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----------TGA------NLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----------~g~------~v~~v~~~~~~~~d~~~l~~~ 204 (368)
|++.+++..+. ...+++|+....+||+..+.+...... .|. .+..++.+ |++.+++.
T Consensus 167 A~e~AlklAR~--~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~ 239 (474)
T PLN02482 167 ACMGVLRLARA--YTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKL 239 (474)
T ss_pred HHHHHHHHHHH--hcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHH
Confidence 99999997632 345568888899999865433221100 000 11222222 78888888
Q ss_pred cc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcc-c----ccCCCCCccEEEecCcCcC
Q 017640 205 LS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM-V----VDVQGLDADFLVASSHKMC 272 (368)
Q Consensus 205 l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~-~----~~~~~~~~d~~~~s~~K~~ 272 (368)
+. .++.+|+++......|.+.| +++|.++|++||+++|+||++. |.. . .+.....+|+++. +|.+
T Consensus 240 l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ga~~~~gv~PDi~t~--gK~l 316 (474)
T PLN02482 240 FEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYGGAQEYFGITPDLTTL--GKVI 316 (474)
T ss_pred HHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcchHhHHhCCCCCEEEe--cchh
Confidence 85 35789999999999998887 7799999999999999999985 321 0 1111235888655 5966
Q ss_pred CC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 273 GP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGT--PAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 273 g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt--~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
|. ..+|.+++++++++.+.+. + .-+..+| .+..+.++..++|+.+++ +.+.+++
T Consensus 317 ggG~Pigav~g~~ei~~~~~~~--~------------------~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~ 373 (474)
T PLN02482 317 GGGLPVGAYGGRREIMEMVAPA--G------------------PMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYL 373 (474)
T ss_pred hCCCceEEEEEcHHHHHhhccC--C------------------CcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHH
Confidence 52 2278889999988776531 0 0011223 455666667777777765 3466777
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
.++.+++.+.|.++
T Consensus 374 ~~~g~~l~~~L~~l 387 (474)
T PLN02482 374 DKITKKLIQGILEA 387 (474)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777654
No 323
>PRK06541 hypothetical protein; Provisional
Probab=99.60 E-value=3.5e-13 Score=130.23 Aligned_cols=269 Identities=11% Similarity=0.002 Sum_probs=170.2
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+++....-....+ . ..+...++.+.+++++..+- +.|.|+++++
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~--~----~~~~~~~la~~l~~~~p~~~-~~v~f~~sGs 122 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPLWS--Y----AHPPAIELAERLAALAPGDL-NRVFFTTGGS 122 (460)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccccc--c----CCHHHHHHHHHHHHhCCCCc-CEEEEcCCcH
Confidence 455677763 356789999999999988642111000 0 12334467777888765433 3899999999
Q ss_pred HHHHHHHHHccCCC--CC--CCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCC-----CCCC----
Q 017640 140 EAINLVAYSWGLSN--LK--SGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDD-----ESPD---- 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~--~~--~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~-----~~~d---- 197 (368)
+|++.+++..+... .. .+.+|+....+||+........... .+ ..+..+|...- +.-+
T Consensus 123 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 202 (460)
T PRK06541 123 EAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF 202 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHH
Confidence 99999998653210 11 2467888898898866443332110 00 11223332210 1012
Q ss_pred ----HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCC-cCCccc----ccCCCCC
Q 017640 198 ----LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMV----VDVQGLD 260 (368)
Q Consensus 198 ----~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~-~~~~~~----~~~~~~~ 260 (368)
++.+++.+. .++.+|+++..+++.|.+.| +++|.++|++||+++|+||+| ++|... .+.....
T Consensus 203 ~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~ 282 (460)
T PRK06541 203 GRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYV 282 (460)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCC
Confidence 356777774 35688899999999999988 999999999999999999999 565431 1112335
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++ ++|.+|.. .+|.+++++++.+.+.+.. +... .......+..+.++..+.++.+.
T Consensus 283 PDivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~-~~~~----------------~~~T~~gnp~~~aaala~l~~l~ 343 (460)
T PRK06541 283 PDIIT--CAKGITSGYSPLGAMIASDRLFEPFLDGP-TMFL----------------HGYTFGGHPVSAAVALANLDIFE 343 (460)
T ss_pred CCEEE--ecccccCCccceeEEEEcHHHHHHhhcCC-Cccc----------------cCCCCCCCHHHHHHHHHHHHHHH
Confidence 88886 56977632 3899999998877654321 0000 00011345566777777777776
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+. .+.+++.++.+++.+.|.++
T Consensus 344 ~~---~~~~~~~~~g~~l~~~L~~l 365 (460)
T PRK06541 344 RE---GLLDHVRDNEPAFRATLEKL 365 (460)
T ss_pred hc---cHHHHHHHHHHHHHHHHHHh
Confidence 53 35678888888888888765
No 324
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.60 E-value=4e-13 Score=129.10 Aligned_cols=257 Identities=19% Similarity=0.172 Sum_probs=170.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..|.+.+++.+.+...... +. ..+...++.+.|.+.+.. . +.+.|+++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~~------~~~~~~~la~~l~~~~p~-~-~~v~f~~sGs 119 (428)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLY---GT------PTELEIEFAKMLKEAIPS-L-EKVRFVNSGT 119 (428)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcc---CC------CCHHHHHHHHHHHHhCCC-C-cEEEEeCCHH
Confidence 445677763 35678899999999988763211 11 123344677777777652 2 4899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc----------C------CEEEEEeCCCCCCCCHHHHHH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT----------G------ANLKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~----------g------~~v~~v~~~~~~~~d~~~l~~ 203 (368)
+|++.+++..+. ...+..|+.....||+............ + ..+..++.+ |++.+++
T Consensus 120 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~ 192 (428)
T PRK12389 120 EAVMTTIRVARA--YTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFN-----DIEALKE 192 (428)
T ss_pred HHHHHHHHHHHH--hhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCC-----CHHHHHH
Confidence 999999997632 3445688888999998764433321100 0 011122221 7888888
Q ss_pred hcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCccc----ccCCCCCccEEEecCcCcC
Q 017640 204 MLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHMV----VDVQGLDADFLVASSHKMC 272 (368)
Q Consensus 204 ~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~~----~~~~~~~~d~~~~s~~K~~ 272 (368)
.+. .++.+|+++...+..|.+.| +++|.++|++||+++|+||++...... .+.....+|+++. +|.+
T Consensus 193 ~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~a~~~~gv~PDivt~--gK~l 270 (428)
T PRK12389 193 ALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGGAQDLLGVEPDLTAL--GKII 270 (428)
T ss_pred HHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcchhhHHhCCCCCeeee--chhh
Confidence 885 35789999999999999988 999999999999999999998732111 1112346888755 5965
Q ss_pred CC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 017640 273 GP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVK 351 (368)
Q Consensus 273 g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~ 351 (368)
|. ..+|.+++++++.+.+.+. +.. ..+.....|..+.++..++++.+++. .+.+++.+
T Consensus 271 ggG~Pi~av~~~~~i~~~~~~~--~~~----------------~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~ 329 (428)
T PRK12389 271 GGGLPIGAYGGRKDIMEQVAPL--GPA----------------YQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDR 329 (428)
T ss_pred cCCCceeEEeEHHHHHhhhccC--CCc----------------ccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHH
Confidence 42 2278889999988766431 000 01111245666777788888888763 36677888
Q ss_pred HHHHHHHHHHhh
Q 017640 352 WIICSIIVIQER 363 (368)
Q Consensus 352 l~~~l~~~l~~~ 363 (368)
+.+++.+.|+++
T Consensus 330 ~g~~l~~~L~~l 341 (428)
T PRK12389 330 LGAMLEEGILEA 341 (428)
T ss_pred HHHHHHHHHHHH
Confidence 888888777653
No 325
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.60 E-value=3.6e-13 Score=130.30 Aligned_cols=263 Identities=16% Similarity=0.202 Sum_probs=163.9
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.++..... +.. ....+...++.+.|++++.....+.|.|+++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~~~---~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGs 125 (451)
T PRK06918 52 DGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHT---GFN---VMMYEPYIELAEKLAALAPGSFDKKVLFLNSGA 125 (451)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCc---ccc---ccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcH
Confidence 344577763 35678999999999998864211 110 001234457888888887643223899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-------cC---CEEEEEeCCC-----CCCCC-------
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-------TG---ANLKFLNLND-----DESPD------- 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-------~g---~~v~~v~~~~-----~~~~d------- 197 (368)
+|++.+++..+. ...+..|+....+||+.......+... .+ ..+..+|... .+..+
T Consensus 126 eA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (451)
T PRK06918 126 EAVENAVKIARK--YTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFM 203 (451)
T ss_pred HHHHHHHHHHHH--HhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHH
Confidence 999999987632 344567888899999876544433210 00 0122233221 11100
Q ss_pred HHHHHHhc----c-cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc--cccCCCC--CccE
Q 017640 198 LDKLKEML----S-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQGL--DADF 263 (368)
Q Consensus 198 ~~~l~~~l----~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~--~~~~~~~--~~d~ 263 (368)
++.+++.+ . .++.+|+++..+...|.+.| +++|.++|++||+++|+||++. ++.. .+....+ .+|+
T Consensus 204 ~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi 283 (451)
T PRK06918 204 IEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDL 283 (451)
T ss_pred HHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCE
Confidence 12233332 2 35788999988887888776 8899999999999999999986 3322 1122222 3775
Q ss_pred EEecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 264 LVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 264 ~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
+ +++|.+++ | +|++++++++++.+.+...+. ....+....++..++++++.+.+
T Consensus 284 ~--t~sK~l~~-G~pig~v~~~~~i~~~~~~~~~~~---------------------T~~g~~l~~aaa~a~l~~i~~~~ 339 (451)
T PRK06918 284 I--TVSKSLGA-GVPISGVIGRKEIMDESAPGELGG---------------------TYAGSPLGCAAALAVLDIIEKEN 339 (451)
T ss_pred E--eeehhhcC-CCccEEEEEcHHHHhccCCCCcCc---------------------CCCcCHHHHHHHHHHHHHHHHCC
Confidence 4 67897773 4 999999999887765432211 12466666777777888776633
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 017640 342 MQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.++++++.+++.+.++++
T Consensus 340 ---~~~~~~~~g~~l~~~l~~l 358 (451)
T PRK06918 340 ---LNDRAIELGKVVMNRFEEM 358 (451)
T ss_pred ---HHHHHHHHHHHHHHHHHHH
Confidence 4455555555655555443
No 326
>PRK06062 hypothetical protein; Provisional
Probab=99.60 E-value=4.6e-13 Score=129.18 Aligned_cols=263 Identities=12% Similarity=0.075 Sum_probs=169.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+..|.+.+++.+.+........ . . ..+...++.+.|+++..... +.|.|+++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~-~--~----~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 122 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP-A--H----ANDARSEAARLIAERAPGDL-SKVFFTNGGA 122 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC-c--c----CCHHHHHHHHHHHHhCCCCC-CEEEEcCChH
Confidence 4556777743 568899999999999886422111 0 1 13334567788888775332 3899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc---C-----CEEEEEeCCCCCC------CC-------H
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT---G-----ANLKFLNLNDDES------PD-------L 198 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~---g-----~~v~~v~~~~~~~------~d-------~ 198 (368)
+|++.+++..+. ...+.+|+.....||+............ . ..+..++...... -| +
T Consensus 123 EAve~AlklAr~--~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 123 DANEHAVRMARL--HTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred HHHHHHHHHHHH--hhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 999999997632 3445689989999998764433332100 0 0112222111110 12 5
Q ss_pred HHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEE
Q 017640 199 DKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLV 265 (368)
Q Consensus 199 ~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~ 265 (368)
+.+++.++ +++.+|+++......|.+.| +++|.++|++||+++|+||+++ +|.. ..+.....+|+++
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi~t 280 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDLIT 280 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCeee
Confidence 67777774 35789999999999999988 9999999999999999999987 4332 1122234689776
Q ss_pred ecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 266 ASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 266 ~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
. +|.+|.. .+|.+++++++.+.+.+.....+ . ..+.+..+.++..++|+.+++.+
T Consensus 281 ~--gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~----------------~---T~~gnpl~~Aaa~a~L~~l~~~~-- 337 (451)
T PRK06062 281 F--AKGVNSGYVPLGGVAISEAIAATFADRPYPGG----------------L---TYSGHPLACAAAVATINAMEEEG-- 337 (451)
T ss_pred e--chhhhcCCcCcEEEEEcHHHHHHhccCCCCCC----------------C---CCCCCHHHHHHHHHHHHHHHhcC--
Confidence 5 5966542 37888888888776642110000 0 11456777778888888887743
Q ss_pred HHHHHHHHHH-HHHHHHHHh
Q 017640 344 KIHAYEVKWI-ICSIIVIQE 362 (368)
Q Consensus 344 ~i~~~~~~l~-~~l~~~l~~ 362 (368)
+.+++.++. +++.+.|++
T Consensus 338 -l~~~~~~~G~~~l~~~L~~ 356 (451)
T PRK06062 338 -IVENAARIGAEVLGPGLRE 356 (451)
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 556666665 355555544
No 327
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.60 E-value=5.3e-13 Score=128.43 Aligned_cols=272 Identities=13% Similarity=0.102 Sum_probs=170.4
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+..|.+.+++.+.++.+...+..+ . ..+...++.+.|++++...- +.|.|+++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~--~----~~~~~~~la~~l~~~~p~~~-~~v~f~~sGs 116 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQ--M----GHPKAFELANRIAEIAPGGL-NHVFFTNSGS 116 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCC--c----CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 4556888743 47889999999999988642211100 0 12334467888888874322 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHH------HcC---CEEEEEeCCCC-----CCC-----
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDD-----ESP----- 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~------~~g---~~v~~v~~~~~-----~~~----- 196 (368)
+|++.+++...... - ..+.+|+.....||+.......+.. .++ ..+..+|...+ +..
T Consensus 117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 99999998653210 0 1245799999999986432221110 001 11233333211 000
Q ss_pred ---CHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCC-cCCcc----cccCCCCC
Q 017640 197 ---DLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHM----VVDVQGLD 260 (368)
Q Consensus 197 ---d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~-~~~~~----~~~~~~~~ 260 (368)
.++.|++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||+| ++|.. ..+.....
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~ 276 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT 276 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC
Confidence 1456777774 45789999999999999988 999999999999999999998 55542 11222346
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++. +|.+|.. .+|.+++++++.+.+......+.. +. ..+ ..+.+..+.+++.++++.++
T Consensus 277 PDivt~--gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~----~~---------~~~-T~~g~pl~~aaa~a~L~~l~ 340 (442)
T PRK13360 277 PDLLTC--AKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIE----FF---------HGY-TYSGHPLACAAALATLDLYE 340 (442)
T ss_pred Cceeee--eeccccCccceEEEEEcHHHHHHhhcCCccccc----cc---------cCC-CCCCCHHHHHHHHHHHHHHH
Confidence 888755 5976532 277888898887654321000000 00 001 11457777888888899888
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+ +.++..++.+++.+.|++.
T Consensus 341 ~~~---l~~~~~~~g~~l~~~l~~l 362 (442)
T PRK13360 341 REG---LLTRAARLAPYWEDALHSL 362 (442)
T ss_pred hCC---HHHHHHHHHHHHHHHHHHh
Confidence 743 5567777777777777654
No 328
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.59 E-value=2.3e-13 Score=127.39 Aligned_cols=232 Identities=16% Similarity=0.195 Sum_probs=156.7
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++++.++..... +... ..+...++.+.++++.+.+ .++|+++++
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~---~~~~----~~~~~~~la~~l~~~~~~~---~v~~~~SGs 91 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVA---GPMF----EHEEKEEMLEELSKWVNYE---YVYMGNSGT 91 (364)
T ss_pred CCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCc---cCCc----CCHHHHHHHHHHHhhcCCC---EEEEeCchH
Confidence 344577763 35678899999999998864221 1111 1344557888888888643 889999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----cC-----CEEEEEeCCCCCCCCHHHHHHhcccCce
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDDESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----~g-----~~v~~v~~~~~~~~d~~~l~~~l~~~~~ 210 (368)
+|++.+++..+. ...+++|+..+.+||+........... .+ ..+..++.+ |++.+++.+.++++
T Consensus 92 eA~e~Alklar~--~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~~i~~~~a 164 (364)
T PRK04013 92 EAVEAALKFARL--YTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN-----DVEAAKEAITKETA 164 (364)
T ss_pred HHHHHHHHHHHH--HhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC-----CHHHHHHHhcCCcE
Confidence 999999998742 233478999999999865433221100 01 112333332 78899999988899
Q ss_pred EEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc---CCcc-cccCCCCCccEEEecCcCcCCC-CcceEEE
Q 017640 211 LVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS---VPHM-VVDVQGLDADFLVASSHKMCGP-TGIGFLF 281 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~---~~~~-~~~~~~~~~d~~~~s~~K~~g~-~G~G~l~ 281 (368)
+|++++.+...|...+ +++|.++|++||+++|+||+++ .|.. ..+.....+|+++.+ |.+|. ..+|.++
T Consensus 165 AvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~g--K~lggG~P~~a~~ 242 (364)
T PRK04013 165 AVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMG--KGIGNGVPVSLTL 242 (364)
T ss_pred EEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEec--ccccCCceeEEEE
Confidence 9999999888887665 8999999999999999999987 2221 112223468988885 96553 2277777
Q ss_pred EcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 282 ~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
.++++. +...+ .....|..+.++..+.++.+++.+
T Consensus 243 ~~~~~~----~~~~~---------------------~T~~gnp~~~aaa~a~l~~i~~~~ 277 (364)
T PRK04013 243 TNFDVE----RGKHG---------------------STFGGNPLACKAVAVTLRILRRER 277 (364)
T ss_pred eccccc----CCCcC---------------------CCCCcCHHHHHHHHHHHHHHHhcc
Confidence 776641 11111 111467777788888888888754
No 329
>PRK07482 hypothetical protein; Provisional
Probab=99.59 E-value=3e-13 Score=130.79 Aligned_cols=271 Identities=11% Similarity=-0.001 Sum_probs=168.8
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+++...... +. ......+...++.+.|++.+...- +.+.|+++++
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~-~~----~~~~~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGS 121 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYY-HT----YVGHGTEASITLSKRIIDRAPAGM-SKVYYGLSGS 121 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCcc-cc----ccccCCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence 4556777653 4678999999999998874211 00 000113444567888888775332 3899999999
Q ss_pred HHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHH------HcC---CEEEEEeCCCCCC-----------
Q 017640 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDDES----------- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~------~~g---~~v~~v~~~~~~~----------- 195 (368)
+|++.+++..+.. ....+.+|+.....||+.......+.. ..+ ..+..++......
T Consensus 122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence 9999999876321 012246788889999985432222110 011 1122222211000
Q ss_pred --CCHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCC
Q 017640 196 --PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLD 260 (368)
Q Consensus 196 --~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~ 260 (368)
-+++.+++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~ 281 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIE 281 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCC
Confidence 13567777773 35799999999888888876 8999999999999999999976 4432 11223446
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcc--cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFL--GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
+|+++.+ |.+|.. .+|.+++++++.+.+.... .|... .....+.|..+.++..++++.
T Consensus 282 PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~----------------h~~T~~gnpl~~Aaa~a~L~~ 343 (461)
T PRK07482 282 PDLITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIG----------------HGWTYSGHPICAAAALANLDI 343 (461)
T ss_pred CCEEEEc--cccccCccccceeeecHHHHHHHhcccccCCccc----------------cCCCCCcCHHHHHHHHHHHHH
Confidence 9999976 965432 4788888888765544211 00000 001125677777888888888
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 337 LSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 337 ~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++. .+.++.+++.+++.+.|++.
T Consensus 344 ~~~~---~l~~~~~~~g~~l~~~L~~l 367 (461)
T PRK07482 344 LERE---NLVGNAAEVGAYFRARLRAA 367 (461)
T ss_pred HHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 8774 35566666777776666543
No 330
>PRK07046 aminotransferase; Validated
Probab=99.59 E-value=4.4e-13 Score=129.19 Aligned_cols=257 Identities=14% Similarity=0.093 Sum_probs=169.1
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+.+|.+.+++++.+...... +. ..+...++.+.|.+.++. +.|.|++++|
T Consensus 73 DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~---~~------~~~~~~~lAe~l~~~~~~---~~v~F~nSGt 140 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT---ML------PSEDAAWVGEELARRFGL---PYWQVATTAT 140 (453)
T ss_pred CCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC---CC------CCHHHHHHHHHHHHHhCC---CEEEEECCHH
Confidence 344577753 24577899999999998863211 11 123444677888888753 3899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC----------C------EEEEEeCCCCCCCCHHHHHH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG----------A------NLKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g----------~------~v~~v~~~~~~~~d~~~l~~ 203 (368)
+|++.+++..+. ...++.|+..+.+||+..+...... ..+ . .+..++.+ |++.+++
T Consensus 141 EA~e~AlrlAR~--~TGr~~ii~~~g~YHG~~d~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~ 212 (453)
T PRK07046 141 DANRFVLRWARA--VTGRPKILVFNGCYHGTVDDVFVDL-VDGRPVQRPGLLGQVHDLTATTRVVEFN-----DLAALEA 212 (453)
T ss_pred HHHHHHHHHHHH--hhCCCEEEEECCCCCCCcHHhHhhc-cCCCCCCCCCCCCCCccccCceEeeCCC-----CHHHHHH
Confidence 999999997632 3456789999999998643322211 001 0 11222221 8899999
Q ss_pred hcc-cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc----CCcccccCCCCCccEEEecCcCcCC-
Q 017640 204 MLS-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS----VPHMVVDVQGLDADFLVASSHKMCG- 273 (368)
Q Consensus 204 ~l~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~----~~~~~~~~~~~~~d~~~~s~~K~~g- 273 (368)
.+. .++.+|+++......|.+.| ++++.++|++||+++|+||++. .|... ......+|+++. .|.+|
T Consensus 213 ~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~-~~~gv~PDi~t~--gK~lgg 289 (453)
T PRK07046 213 ALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYT-RAHGLEPDFLVV--GKPIAG 289 (453)
T ss_pred HhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchh-HHhCCCccceee--hhhhcC
Confidence 885 46789999999988888877 8999999999999999999985 33221 222346898875 59654
Q ss_pred CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 017640 274 PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLSTIGMQKIHAYEVK 351 (368)
Q Consensus 274 ~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~a~~~al~~~~~~g~~~i~~~~~~ 351 (368)
+..+|.+++++++.+.+.+....... ..-+..+ ..|..+.++..+.++.+.+. .+.+++++
T Consensus 290 G~Pi~av~g~~~i~~~~~~~~~~~~~--------------~~~~~~~T~~gnpl~~aa~~a~L~~l~~~---~~~~~~~~ 352 (453)
T PRK07046 290 GVPCAVYGFSAELAERAQAAKASAPP--------------GHSGIGTTLSANALAMAAMRATLAEVMTE---AAYAHMLA 352 (453)
T ss_pred CCcceeeeehHHHHHHHhhccccCCC--------------CCceeCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHH
Confidence 33389999999988766532110000 0001122 34666777777778877653 34667777
Q ss_pred HHHHHHHHHHh
Q 017640 352 WIICSIIVIQE 362 (368)
Q Consensus 352 l~~~l~~~l~~ 362 (368)
+.+++.+.|.+
T Consensus 353 ~g~~l~~~L~~ 363 (453)
T PRK07046 353 LAARLAAGLRA 363 (453)
T ss_pred HHHHHHHHHHH
Confidence 77777777764
No 331
>PRK06105 aminotransferase; Provisional
Probab=99.58 E-value=3.7e-13 Score=130.14 Aligned_cols=273 Identities=10% Similarity=0.025 Sum_probs=169.4
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.++++...-... .+....+...++.+.|++.+..+- +.|.|+++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-----~~~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 119 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHT-----FSHKSHGPVIDLAEKLVAMAPVPM-SKVFFTNSGS 119 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeec-----ccccCCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 455677764 2557899999999999886421100 000113344568888888875432 3899999999
Q ss_pred HHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHH------HcC---CEEEEEeCCCCCC-----------
Q 017640 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDDES----------- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~------~~g---~~v~~v~~~~~~~----------- 195 (368)
+|++.+++..... ....+.+|+.....||+.......+.. ..+ ..+..++......
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 199 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHH
Confidence 9999999874211 012345788888888876532211110 001 0122222211000
Q ss_pred --CCHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCC-cCCcc----cccCCCCC
Q 017640 196 --PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHM----VVDVQGLD 260 (368)
Q Consensus 196 --~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~-~~~~~----~~~~~~~~ 260 (368)
..++++++.+. .++.+|+++..+...|.+.| +++|.++|++||+++|+||++ ++|.. ..+.....
T Consensus 200 ~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~ 279 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIK 279 (460)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCC
Confidence 01356777663 35789999999998898887 999999999999999999998 46543 12223346
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++.+ |.+|.. .+|.+++++++.+.+.+.....+.. ........|..+.++..++++.++
T Consensus 280 PDi~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~--------------~h~~T~~gnpl~~aaa~a~L~~i~ 343 (460)
T PRK06105 280 PDILVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIGTF--------------GHGFTASGHPVAAAVALENLAIIE 343 (460)
T ss_pred CCeeeee--cccccCcccceEEEEcHHHHHHHhcccccCccc--------------ccCCCCCCCHHHHHHHHHHHHHHH
Confidence 8988766 966543 3789999998876554321000000 000111455666667777888888
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+. .+.++++++.+++.+.|.++
T Consensus 344 ~~---~l~~~v~~~g~~l~~~L~~l 365 (460)
T PRK06105 344 ER---DLVGNAAERGARLQARLRAL 365 (460)
T ss_pred hc---cHHHHHHHHHHHHHHHHHHh
Confidence 63 45677777777777777654
No 332
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.58 E-value=2.8e-13 Score=130.32 Aligned_cols=264 Identities=10% Similarity=0.038 Sum_probs=158.3
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++..|+|..+ .|..++.+.+++.+++.... ...... . ..+...++.+.+.+..+.+..+.++|+++++
T Consensus 39 dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~-~~~~~~-~----~~~~~~~la~~l~~~~~~~~~~~~~f~~sGs 112 (425)
T PRK08088 39 EGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV-L----AYEPYLELCEKMNQKVPGDFAKKTLLVTTGS 112 (425)
T ss_pred CCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC-Cccccc-c----CCHHHHHHHHHHHHhCCCCCCCEEEEeCCcH
Confidence 3445676633 46779999999999988642 111000 0 0122336777777777654323788998889
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc-----CC-----EEEE--EeCCCCCC-C--CHHHHHHh
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT-----GA-----NLKF--LNLNDDES-P--DLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~-----g~-----~v~~--v~~~~~~~-~--d~~~l~~~ 204 (368)
+|+..+++.... ...+..|+..+++||+............ |. .+.. +|.+.++. . +++.|++.
T Consensus 113 ea~e~Alklar~--~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 190 (425)
T PRK08088 113 EAVENAVKIARA--ATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERI 190 (425)
T ss_pred HHHHHHHHHHHH--HhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHH
Confidence 988888876521 3344567777999998765544432100 00 0111 22211110 0 14568887
Q ss_pred cc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc--ccCCCCCccEEEecCcCcC
Q 017640 205 LS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQGLDADFLVASSHKMC 272 (368)
Q Consensus 205 l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--~~~~~~~~d~~~~s~~K~~ 272 (368)
+. ++.++|+++......|.+.+ +++|.++|++||+++|+|++|+ ++... ...+..+.+.-+.|++|.+
T Consensus 191 l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l 270 (425)
T PRK08088 191 FKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSI 270 (425)
T ss_pred HHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccc
Confidence 74 35688888888877787776 8999999999999999999987 22221 1111222233357888987
Q ss_pred CCCc-ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 017640 273 GPTG-IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVK 351 (368)
Q Consensus 273 g~~G-~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~ 351 (368)
++.- +|++++++++++.+.....+ ...+.+....+++...++..... .+.++.++
T Consensus 271 ~~G~rig~v~~~~~~~~~~~~~~~~---------------------~t~~~~~~~~~a~~~~l~~~~~~---~~~~~~~~ 326 (425)
T PRK08088 271 AGGFPLAGVTGRAEVMDAIAPGGLG---------------------GTYAGNPIACAAALAVLKVFEQE---NLLQKANA 326 (425)
T ss_pred cCCCcceeeEecHHHHhhcCCCCCC---------------------CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHH
Confidence 7422 89999999988877643221 11145556667777777766542 33444444
Q ss_pred HHHHHHHHHH
Q 017640 352 WIICSIIVIQ 361 (368)
Q Consensus 352 l~~~l~~~l~ 361 (368)
+.+++.+.+.
T Consensus 327 ~~~~~~~~l~ 336 (425)
T PRK08088 327 LGEKLKDGLL 336 (425)
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 333
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=2.7e-14 Score=130.14 Aligned_cols=253 Identities=22% Similarity=0.231 Sum_probs=179.2
Q ss_pred EEeccCC-CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAA-TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
-||+.+. .+++.+.+.+++..+-...... .+. -+..+..+++++.+|+++|.++ .++|..|- ..+.+.+.
T Consensus 145 NYLGFa~~~g~ca~~~~~~~~kygl~~css----~~e--~G~~~~hkelE~l~A~f~g~e~--a~vF~mGf-~TNs~~~p 215 (519)
T KOG1357|consen 145 NYLGFAQSVGPCAEASLKSFDKYGLSRCSS----RHE--AGTTEEHKELEELVARFLGVED--AIVFSMGF-ATNSMNIP 215 (519)
T ss_pred ccccccccCCcCChHHHHHHHHhccccccc----chh--cccHHHHHHHHHHHHHhcCCcc--eEEEeccc-cccccCcc
Confidence 3555543 3478888888877664432111 111 1235677789999999999984 67887773 45666666
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-------C------ceEEEE
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-------K------TKLVVI 214 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------~------~~~v~~ 214 (368)
++ +.+|.-|+-.+.+|.|.. .-|+..|+.++....+ |..+||+.|.+ + ..+|+.
T Consensus 216 ~l----~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iiv 282 (519)
T KOG1357|consen 216 SL----LGKGSLIISDELNHASLI----TGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICV 282 (519)
T ss_pred ee----ecCCcceeeccccchhee----ccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeee
Confidence 66 889999999999999854 4456779999999988 88888887753 2 247788
Q ss_pred cccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEccc
Q 017640 215 HHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSD 285 (368)
Q Consensus 215 ~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~ 285 (368)
....+.-|.+..+.++.++++++.++++.|++|+.|... +..+..+.|++.+.+.|.||..| |++..+++
T Consensus 283 egiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G-Gyiagsk~ 361 (519)
T KOG1357|consen 283 EGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG-GYIAGSKE 361 (519)
T ss_pred ccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc-ceecCcHH
Confidence 899999999999999999999999999999999987762 12334468999999999999986 99999999
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-h---CHHHHHHHHHHHHHHHHHHHH
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST-I---GMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~-~---g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+++.++..... .....+.+.+.......+++.+.. . ..+...+++.+...+++..++
T Consensus 362 lid~lrt~s~~-------------------~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~ 422 (519)
T KOG1357|consen 362 LIDYLRTPSPS-------------------ALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQ 422 (519)
T ss_pred HHhhhccCCCc-------------------eeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhh
Confidence 99887733221 111112222222333445555542 1 245555777788888887776
Q ss_pred hh
Q 017640 362 ER 363 (368)
Q Consensus 362 ~~ 363 (368)
+.
T Consensus 423 ~~ 424 (519)
T KOG1357|consen 423 KM 424 (519)
T ss_pred cC
Confidence 54
No 334
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.58 E-value=5e-13 Score=127.95 Aligned_cols=258 Identities=15% Similarity=0.165 Sum_probs=166.2
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+..|.+.+++.+.+...... + . ..+...++.+.|.+.++... +.|.|+++++
T Consensus 51 dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---~--~----~~~~~~~la~~L~~~~~~~~-~~v~f~~SGs 120 (433)
T PRK00615 51 LGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSY---G--L----TSEQEILFAEELFSYLGLED-HKIRFVSSGT 120 (433)
T ss_pred CCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCC---C--C----CCHHHHHHHHHHHHhCCCCc-CEEEEeCchH
Confidence 3445777632 4678999999999998764211 1 1 12334467777888775432 4899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHH-HHHHHHHcCCE---E-EEE--e-CCCC----CCCCHHHHHHhcc-
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVP-WQLVAQKTGAN---L-KFL--N-LNDD----ESPDLDKLKEMLS- 206 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~-~~~~~~~~g~~---v-~~v--~-~~~~----~~~d~~~l~~~l~- 206 (368)
+|++.+++..+. ...+..|+.....||+..+. +... ...+.. . ... + .... ..-|++.+++.+.
T Consensus 121 EA~e~AiklAr~--~tgr~~ii~~~~~yHG~td~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 197 (433)
T PRK00615 121 EATMTAVRLARG--ITGRSIIIKFLGCYHGHADTLLQGI-SFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNS 197 (433)
T ss_pred HHHHHHHHHHHH--hhCCCEEEEEcCccCCCCcccCccc-ccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHh
Confidence 999999997632 33456788888888885322 1111 011100 0 000 0 0000 0116788888874
Q ss_pred --cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCc-c----cccCCCCCccEEEecCcCcCCCC
Q 017640 207 --RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPH-M----VVDVQGLDADFLVASSHKMCGPT 275 (368)
Q Consensus 207 --~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~-~----~~~~~~~~~d~~~~s~~K~~g~~ 275 (368)
+++.+|+++......|.+.| +++|.++|++||+++|+||+|. |. . ..+.....+|+++ ++|.+|..
T Consensus 198 ~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~~ga~~~~gv~PDi~~--~gK~lggG 274 (433)
T PRK00615 198 LGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQGGAAAIYHVKPDITV--YGKILGGG 274 (433)
T ss_pred cCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccHhHHHHhcCCCCCeEE--EcccccCC
Confidence 35789999999999999887 6799999999999999999994 32 1 1112234688876 56976632
Q ss_pred -cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 276 -GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 276 -G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
.+|++++++++++.+.+.. ..+..+ ..+....++..++++.+++. .+.++++++
T Consensus 275 ~p~~av~~~~~i~~~~~~~~--------------------~~~~~~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~ 331 (433)
T PRK00615 275 LPAAAVVAHKSIMDHLAPEG--------------------TIFQAGTLSGNPLAMAAGKASINLCREQ---GFYTQLSTL 331 (433)
T ss_pred cceeeeeecHHHHhhhcCCC--------------------CcccCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHH
Confidence 2789999999887765310 011112 35677788888888888763 346777777
Q ss_pred HHHHHHHHHh
Q 017640 353 IICSIIVIQE 362 (368)
Q Consensus 353 ~~~l~~~l~~ 362 (368)
.+++.+.|++
T Consensus 332 g~~l~~~l~~ 341 (433)
T PRK00615 332 EQNFLSPIEE 341 (433)
T ss_pred HHHHHHHHHH
Confidence 7777666654
No 335
>PRK07678 aminotransferase; Validated
Probab=99.57 E-value=7.3e-13 Score=127.86 Aligned_cols=268 Identities=9% Similarity=0.026 Sum_probs=169.3
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+.+|.+.+++.+.+......+. .. ..+...++.+.|+++++.. +.++|+++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~---~~----~~~~~~~lae~l~~~~~~~--~~v~f~~sGs 115 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL---TQ----SHEPAIKLAEKLNEWLGGE--YVIFFSNSGS 115 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc---cc----CCHHHHHHHHHHHHhCCCC--CEEEEeCCcH
Confidence 445677763 3567899999999998886422211 01 1233446888888887653 3899999999
Q ss_pred HHHHHHHHHccCCC---CC-CCCEEEEcCCCCcccHHHHHHHHHHc------C---CEEEEEeCCCCCCC---------C
Q 017640 140 EAINLVAYSWGLSN---LK-SGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDDESP---------D 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~~-~gd~vl~~~~~~~s~~~~~~~~~~~~------g---~~v~~v~~~~~~~~---------d 197 (368)
+|++.+++..+... -+ .+.+|+.....||+............ + ..+..++....... |
T Consensus 116 eA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (451)
T PRK07678 116 EANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYD 195 (451)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHH
Confidence 99999998753211 01 23578888999998654333221100 0 11222332211110 1
Q ss_pred ---HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCc
Q 017640 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (368)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~ 261 (368)
++.+++.+. +++.+|+++.++...|.+.| ++++.++|++||+++|+||++. +|..- .+.....+
T Consensus 196 ~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~P 275 (451)
T PRK07678 196 LECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKP 275 (451)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCC
Confidence 223555563 46799999999888888877 8999999999999999999984 55431 22223469
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++.+ |.+|.. .+|.+++++++.+.+.+....+.. ......+.|..+.++..++++.+++
T Consensus 276 Divt~g--K~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~---------------~h~~T~~gnp~~~aaa~a~l~~l~~ 338 (451)
T PRK07678 276 DIITMA--KGITSAYLPLSATAVKKEIYEAFKGKGEYEHF---------------RHVNTFGGNPAACALALKNLEIMEN 338 (451)
T ss_pred CEEEee--cccccCCcceeEEEEcHHHHHHHhccCccccc---------------ccCCCCCcCHHHHHHHHHHHHHHHh
Confidence 999775 966543 389999999987766532100000 0011225667777788888888876
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
. .+.+++.++.+++.+.|.+
T Consensus 339 ~---~~~~~~~~~g~~l~~~l~~ 358 (451)
T PRK07678 339 E---NLIERSAQLGELLLEQLKE 358 (451)
T ss_pred C---CHHHHHHHHHHHHHHHHHH
Confidence 4 3566777777777776654
No 336
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.57 E-value=1.4e-12 Score=125.67 Aligned_cols=263 Identities=12% Similarity=0.117 Sum_probs=163.4
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcE-EEeCC
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEI-VFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v-~~t~g 137 (368)
++.-|+|.. ..|+.+|.+.+++.+++...... +. . ....+...++.+.|++++... ....+ +++++
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~-~~-~----~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~s 110 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPL-HT-L----DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPS 110 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCc-cc-c----ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCC
Confidence 344577764 35688999999999988763211 10 0 011344456778888887532 11244 55689
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----cC-----CEEEEEeCCCCCCC--------CH--
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----TG-----ANLKFLNLNDDESP--------DL-- 198 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----~g-----~~v~~v~~~~~~~~--------d~-- 198 (368)
+++|++.+++..+. ...+.+|+.....||+.......+... .+ ..+..++....... +.
T Consensus 111 GsEA~e~AlklAr~--~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (442)
T TIGR00709 111 GADAVEAAIKLAKT--YTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNA 188 (442)
T ss_pred HHHHHHHHHHHHHH--hcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHH
Confidence 99999999997532 344567999999999876554443210 00 11333333211111 11
Q ss_pred --HHHHHhcc------cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 199 --DKLKEMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 199 --~~l~~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
+.+++.+. .++.+|+++.+++..|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+
T Consensus 189 ~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P 268 (442)
T TIGR00709 189 SIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEP 268 (442)
T ss_pred HHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCC
Confidence 12333332 35788889999888888765 8999999999999999999987 4432 111223468
Q ss_pred cEEEecCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 262 DFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 262 d~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
|+++. +|.+|. ..+|+++++++ ++.+.+...+ ...+.|..+.+++.++++.+++.
T Consensus 269 Div~~--gK~l~~G~Pigav~~~~~-~~~~~~~~~~---------------------~T~~gnpla~aaa~a~L~~i~~~ 324 (442)
T TIGR00709 269 DFVVM--SKAVGGGLPLAVLLIAPE-FDAWQPAGHT---------------------GTFRGNQLAMVTGTEALNYWKDD 324 (442)
T ss_pred cEEEE--cccccCCcccEEEEEchH-HhccCCCcCC---------------------CCCCcCHHHHHHHHHHHHHHHhc
Confidence 99985 696654 12899999887 4443321111 11256777778888888887764
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 341 GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++.+++.+++.+.|+++
T Consensus 325 ---~l~~~~~~~g~~l~~~L~~l 344 (442)
T TIGR00709 325 ---NLAQNAQERGERITSFLDDM 344 (442)
T ss_pred ---CHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777666653
No 337
>PRK05965 hypothetical protein; Provisional
Probab=99.57 E-value=8e-13 Score=127.81 Aligned_cols=273 Identities=10% Similarity=-0.003 Sum_probs=170.1
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+..|.+.+++.+++........ .. + ...+...++.+.|++.+..+. +.|+|+++++
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~--~~--~-~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGS 117 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATG--YF--H-FGSEPAIRLAAKLAERAPGSL-NHVYFTLGGS 117 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCccc--cc--c-cCCHHHHHHHHHHHhhCCCCc-CEEEEeCChh
Confidence 4556888743 457799999999999886421110 00 0 012333467888888775333 3899999999
Q ss_pred HHHHHHHHHccCCCC----CCCCEEEEcCCCCcccHHHHHHHHH------HcCC---EEEEEeCCCC----CCCC-----
Q 017640 140 EAINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQ------KTGA---NLKFLNLNDD----ESPD----- 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~~------~~g~---~v~~v~~~~~----~~~d----- 197 (368)
+|++.+++..+.... ..+.+|+....+||+.......+.. ..+. .+..++.... ..-|
T Consensus 118 EAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (459)
T PRK05965 118 DAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAII 197 (459)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHH
Confidence 999999987532110 2245789899999986532222211 0110 1223332210 0012
Q ss_pred ---HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
++.+++.+. +++.+|+++..+...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+
T Consensus 198 ~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~P 277 (459)
T PRK05965 198 AASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCC
Confidence 256777774 46789999999988898876 8999999999999999999977 4432 112223469
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++.+ |.+|.. .+|.+++++++.+.+.+.....+.. ......+.+..+.++..+.++.+++
T Consensus 278 Div~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~--------------~h~~T~~gnpl~~Aaa~a~L~~l~~ 341 (459)
T PRK05965 278 DLMTVA--KGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPV--------------GHGYTYSAHPVSAAVGLEVLRLYHE 341 (459)
T ss_pred CeEEec--hhhccCCcceeEEEEcHHHHHHHhccccccccc--------------cccCCCCCCHHHHHHHHHHHHHHHh
Confidence 999987 965432 4899999999876554211000000 0001124566677777788888876
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
. .+.+++.++.+++.+.|+++
T Consensus 342 ~---~l~~~~~~~g~~l~~~l~~l 362 (459)
T PRK05965 342 G---GLLANGQKAGPRFAAGLDAL 362 (459)
T ss_pred c---cHHHHHHHHHHHHHHHHHhh
Confidence 4 45566777777777777654
No 338
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.56 E-value=5.1e-13 Score=124.40 Aligned_cols=259 Identities=15% Similarity=0.163 Sum_probs=166.6
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|..+|.+.+++.+.+.........+. ..+...++.+.|.+.++... +.+.|++|++
T Consensus 14 dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~------~~~~~~~la~~L~~~~p~~~-~~v~f~~sGs 86 (339)
T PF00202_consen 14 DGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGF------THPEAAELAEKLAELFPGGL-DRVFFANSGS 86 (339)
T ss_dssp TSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTS------EEHHHHHHHHHHHHHSSTTE-EEEEEESSHH
T ss_pred CCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccce------eccchhhhhhhhhhcccccc-ceeeeccCch
Confidence 455688875 3567889999999998877532211111 13344578888888885433 3899999999
Q ss_pred HHHHHHHHHccC----CCCCCCCEEEEcCCCCcccHHHHHHHH------HHcC---CEEEEEeCCCCCCCCHHH------
Q 017640 140 EAINLVAYSWGL----SNLKSGDEVILTVAEHHSAIVPWQLVA------QKTG---ANLKFLNLNDDESPDLDK------ 200 (368)
Q Consensus 140 ~a~~~~~~~~~~----~~~~~gd~vl~~~~~~~s~~~~~~~~~------~~~g---~~v~~v~~~~~~~~d~~~------ 200 (368)
+|++.+++.... ........|+....+||+.......+. +..+ ..+..+|.+ ++..
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~ 161 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFP-----DPAADEEEQA 161 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETT-----CHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCC-----ccchhhhHHH
Confidence 999999997620 012345689999999997554322221 0011 234666765 3333
Q ss_pred ----HHH----hcccCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccE
Q 017640 201 ----LKE----MLSRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADF 263 (368)
Q Consensus 201 ----l~~----~l~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~ 263 (368)
+++ .-.+++.+|+++..+...|...+ +++|.++|++||+++|+||++. +|.. ..+.....+|+
T Consensus 162 ~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDi 241 (339)
T PF00202_consen 162 CLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDI 241 (339)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSE
T ss_pred HHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCcc
Confidence 222 22346789999999988887775 8999999999999999999987 3322 11223456899
Q ss_pred EEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 264 LVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 264 ~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
++.+ |.++ +..+|.+++++++.+.+.+...+.+. ..+..+.++..+.++.+++.+
T Consensus 242 v~~g--K~l~gG~p~sav~~~~~i~~~~~~~~~~~T~---------------------~g~p~~~aaa~~~l~~~~~~~- 297 (339)
T PF00202_consen 242 VTFG--KGLGGGLPISAVLGSEEIMEAFQPGSHGSTF---------------------GGNPLSCAAALATLEILEEED- 297 (339)
T ss_dssp EEEE--GGGGTTSSEEEEEEEHHHHTTSCTTSSTCTT---------------------TT-HHHHHHHHHHHHHHHHTT-
T ss_pred cccc--cchhhhhhcccccccchhhcccccccccccc---------------------ccchHhhhhhhhHHHhhccHH-
Confidence 9997 9543 34489999999988776544322211 355667777778888888743
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017640 343 QKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~ 362 (368)
+.+++.++.+++.+.|++
T Consensus 298 --~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 298 --LLERVRELGERLREGLRE 315 (339)
T ss_dssp --HHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHH
Confidence 445555555555555543
No 339
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=3.5e-12 Score=122.78 Aligned_cols=262 Identities=13% Similarity=0.121 Sum_probs=164.9
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..+.+.+++.+.+........ .. ...+...++.+.|++.+..+..+.|.|+++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~-----~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGs 125 (441)
T PRK05769 52 DGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL-TD-----FYYEPAVELAERLVEIAPGGFEKKVFFTNSGT 125 (441)
T ss_pred CCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC-cc-----cCCHHHHHHHHHHHHhCCCCCCCEEEECCchH
Confidence 344577763 2557789999999999886421111 00 01233456788888877532224899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-c---------CCEEEEEeCCCCCC-------------C
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-T---------GANLKFLNLNDDES-------------P 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-~---------g~~v~~v~~~~~~~-------------~ 196 (368)
+|++.+++..+. ...+++|+....+||+.......+... . ...+..++...... -
T Consensus 126 EA~e~AlklAr~--~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (441)
T PRK05769 126 ESNEAAIKIARY--HTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNA 203 (441)
T ss_pred HHHHHHHHHHHH--HhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHH
Confidence 999999987532 344567888899999876544433110 0 01133333321100 0
Q ss_pred CHHHHHH-hc-----ccCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCc
Q 017640 197 DLDKLKE-ML-----SRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (368)
Q Consensus 197 d~~~l~~-~l-----~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~ 261 (368)
+++.+++ .+ ..++.+|+++......|.+.| +++|.++|++||+++|+||++. +|... .......+
T Consensus 204 ~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~p 283 (441)
T PRK05769 204 VLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEP 283 (441)
T ss_pred HHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCC
Confidence 1234555 22 235789999999999999998 9999999999999999999987 33221 11112357
Q ss_pred cEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 262 DFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 262 d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
|+++. +|.+| +..+|++++++++.+... ...+ ..| ..+..+.+++.++++.+++
T Consensus 284 Divt~--~K~l~~G~p~gav~~~~~i~~~~~-~~~~------------------~T~---~g~p~~~aaa~a~L~~l~~- 338 (441)
T PRK05769 284 DIITL--AKAIAGGLPLGAVIGRAELMFLPP-GSHA------------------NTF---GGNPVAAAAALATLEELEE- 338 (441)
T ss_pred CEEEE--cccccCCcccEEEEEehhhhhcCC-CCCC------------------CCC---CcCHHHHHHHHHHHHHHHH-
Confidence 88864 59665 223788999988764321 1111 111 2355667777777887765
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 341 GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.++..++.+++.+.|++.
T Consensus 339 ---~~~~~~~~~g~~l~~~L~~l 358 (441)
T PRK05769 339 ---GLLENAQKLGEYLRKELKEL 358 (441)
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 45667777777777777553
No 340
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.56 E-value=1.1e-12 Score=126.43 Aligned_cols=272 Identities=10% Similarity=0.047 Sum_probs=168.8
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+..+...+... . ..+...++.++|++++.... +.|.|+++++
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~--~----~~~~~~~la~~L~~~~p~~~-~~v~f~~sGs 119 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQ--M----GHPLAFELAERLAELAPGGL-DHVFFTNSGS 119 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccc--c----CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 344677763 346789999999999988642221100 0 12334467888888875332 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHH------HcC---CEEEEEeCCC-C----CC------
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLND-D----ES------ 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~------~~g---~~v~~v~~~~-~----~~------ 195 (368)
+|++.+++...... - ..+.+|+.....||+.......... .++ ..+..++... . +.
T Consensus 120 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (445)
T PRK09221 120 ESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEH 199 (445)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHH
Confidence 99999998653110 0 1245788889999886433221110 001 1122333221 0 00
Q ss_pred --CCHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCC
Q 017640 196 --PDLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLD 260 (368)
Q Consensus 196 --~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~ 260 (368)
..++++++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||+++ +|.. ..+.....
T Consensus 200 ~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~ 279 (445)
T PRK09221 200 GAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCC
Confidence 01356666664 45789999999999999998 9999999999999999999984 5432 11222335
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++.| |.++.. .+|.+++++++.+.+......... + ...+ ..+.+..+.+++.++++.++
T Consensus 280 PDi~~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~----------~---~~~~-T~~~~pl~~aaa~a~L~~i~ 343 (445)
T PRK09221 280 PDIITFA--KGLTNGAIPMGAVIASDEIYDAFMQGPEYAIE----------F---FHGY-TYSAHPVACAAGLATLDIYR 343 (445)
T ss_pred CCEEEec--cccccCcccceeeEEcHHHHHhhccCcccccc----------c---cccc-CCCcCHHHHHHHHHHHHHHH
Confidence 7887665 865432 278888898887665421000000 0 0001 11345666677778888887
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+. .+.++..++.+++.+.|+++
T Consensus 344 ~~---~l~~~~~~~g~~l~~~l~~l 365 (445)
T PRK09221 344 EE---DLFERAAELAPYFEDAVHSL 365 (445)
T ss_pred hc---cHHHHHHHHHHHHHHHHHhh
Confidence 64 35688888888888888765
No 341
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=2.2e-12 Score=124.56 Aligned_cols=262 Identities=12% Similarity=0.138 Sum_probs=166.5
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+....... .+. . ..+...++.+.|++.+.... +.|.|+++++
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~-~~~-~----~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 123 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSM-IGY-T----HSERAIRVAEKLAEISPIEN-PKVLFGLSGS 123 (457)
T ss_pred CCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccc-cCc-c----CCHHHHHHHHHHHhhCCCCc-CEEEEeCchH
Confidence 445677773 356789999999999987642111 110 1 12333467888888775432 3899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-----cC-----CEEEEEeCCCCCC--------CCH---
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-----ANLKFLNLNDDES--------PDL--- 198 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-----~g-----~~v~~v~~~~~~~--------~d~--- 198 (368)
+|++.+++..+. ...+..|+.....||+.......+... .+ ..+..+|...... -|.
T Consensus 124 EA~e~AlklAr~--~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 124 DAVDMAIKVSKF--STRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred HHHHHHHHHHHH--hcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 999999997632 344567888899999866443332210 01 1234444431110 022
Q ss_pred -----HHHHHhc------ccCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCC
Q 017640 199 -----DKLKEML------SRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQG 258 (368)
Q Consensus 199 -----~~l~~~l------~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~ 258 (368)
+.+++.+ ..++.+|+++..+...|.+.| +++|.++|++||+++|+||++. +|.. ..+...
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~g 281 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcC
Confidence 2355543 246799999999998898776 8999999999999999999987 3221 112223
Q ss_pred CCccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 259 LDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 259 ~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
..+|+++ ++|.+| +.++|.+++++++.+. .....+ .....+....++..++++.+
T Consensus 282 v~PDiv~--~gK~l~gG~pi~av~~~~~i~~~-~~~~~~---------------------~T~~g~p~~~aaa~a~l~~l 337 (457)
T PRK05639 282 VKPDLII--FGKGVASGMGLSGVIGRKELMDL-TSGSAL---------------------LTPAANPVISAAAEATLEII 337 (457)
T ss_pred CCCCEEE--echhhcCCCcceeEEehHHHHhh-cCCCcc---------------------cCCCcCHHHHHHHHHHHHHH
Confidence 4699998 469654 4448999999998762 111000 01134555667777778887
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 338 STIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 338 ~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++. .+.++..++.+++.+.|+++
T Consensus 338 ~~~---~l~~~~~~~g~~l~~~L~~l 360 (457)
T PRK05639 338 EEE---NLLKNALKVGEFIKKRLLEM 360 (457)
T ss_pred HHc---cHHHHHHHHHHHHHHHHHHH
Confidence 764 34566666777777776653
No 342
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.55 E-value=1.5e-13 Score=131.08 Aligned_cols=223 Identities=20% Similarity=0.178 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
.+.+.++..|+.+|++. ..++++|+|.|+..++.++ +++||.|++...+|.|....+. ..|+.++++...
T Consensus 71 ~i~eAqe~aA~~fgAd~--tyFvvNGTS~ank~vi~a~----~~~GD~VLvdRN~HKSi~~gli----laGa~Pvyl~p~ 140 (557)
T COG1982 71 PIKEAQELAARVFGADH--TYFVVNGTSTANKAVINAV----LTPGDKVLVDRNCHKSIHHGLI----LAGATPVYLEPS 140 (557)
T ss_pred cHHHHHHHHHHHhCCCc--eEEEECCccHHHHHHHHhh----cCCCCEEEecCCccHHHHHHHH----HcCCceEEecCC
Confidence 46689999999999984 6788899999999999998 9999999999999999876633 349999998876
Q ss_pred CC------CCCCHHHHHHhccc--Cc-eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc--c--ccC-C
Q 017640 192 DD------ESPDLDKLKEMLSR--KT-KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM--V--VDV-Q 257 (368)
Q Consensus 192 ~~------~~~d~~~l~~~l~~--~~-~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~--~--~~~-~ 257 (368)
.| +.|+.+.+++++.. .. +++++++++ -.|.++++++|.+.+++.++++.+|++|..... + .+. .
T Consensus 141 ~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~ 219 (557)
T COG1982 141 RNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESAL 219 (557)
T ss_pred CCccccccCCCCHHHHHHHHHhChhhheeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhh
Confidence 44 57799999888754 33 778888874 479999999999999999999999999984322 1 121 2
Q ss_pred CCCccEEEecCcCcCC-CCcceEEEEccc-ccc--cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 017640 258 GLDADFLVASSHKMCG-PTGIGFLFGKSD-LLS--AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAA 333 (368)
Q Consensus 258 ~~~~d~~~~s~~K~~g-~~G~G~l~~~~~-li~--~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~a 333 (368)
+.+.|+++-|.||.++ ..-..++.+++. .++ ++...+ ..+.+++|+++.++++..|
T Consensus 220 ~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~--------------------~~h~STSPsY~l~ASlD~A 279 (557)
T COG1982 220 NGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEAL--------------------MMHQSTSPSYPLMASLDVA 279 (557)
T ss_pred hcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHH--------------------HHHccCCchHHHHHHHHHH
Confidence 2478999999999776 444788888764 111 111110 2334668888888888886
Q ss_pred HHHHHHhCHHHH---HHHHHHHHHHHHHHHHhhcC
Q 017640 334 IDYLSTIGMQKI---HAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 334 l~~~~~~g~~~i---~~~~~~l~~~l~~~l~~~~g 365 (368)
-.+....|...+ .+..-+.++.+.+.+.++.+
T Consensus 280 r~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~ 314 (557)
T COG1982 280 RMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGF 314 (557)
T ss_pred HHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 666665564443 34455556666666655544
No 343
>PRK12403 putative aminotransferase; Provisional
Probab=99.55 E-value=2.1e-12 Score=124.96 Aligned_cols=266 Identities=13% Similarity=0.002 Sum_probs=162.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..|.+.+++.++++.+.... ... ....+...++.++|+++++... +.++|+++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~---~~~--~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 125 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYN---MFF--HTTHPAVIELSELLFSLLPGHY-SHAIYTNSGS 125 (460)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCee---ccc--ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 444677742 356788999999999998743211 000 0113445578888888886432 3899999999
Q ss_pred HHHHHHHHHccCCC---CCCCC-EEEEcCCCCcccHHHHHHHHHHcCCE-----------EEEEeCCCC----CCC----
Q 017640 140 EAINLVAYSWGLSN---LKSGD-EVILTVAEHHSAIVPWQLVAQKTGAN-----------LKFLNLNDD----ESP---- 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~-----------v~~v~~~~~----~~~---- 196 (368)
+|+..+++..+... -++++ .|+....+||+.......+ .+.+ +..+|...- +.+
T Consensus 126 eA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~---s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (460)
T PRK12403 126 EANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATAL---GGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAE 202 (460)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhc---CCCccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 99999999763210 12333 4555566777653322221 1211 222321110 000
Q ss_pred ----CHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCC
Q 017640 197 ----DLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGL 259 (368)
Q Consensus 197 ----d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~ 259 (368)
+++.+++.+. +++.+|+++.+....|.+.| +++|.++|++||+++|+||+++ +|.. ..+....
T Consensus 203 ~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv 282 (460)
T PRK12403 203 FGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF 282 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC
Confidence 1345655552 35689999999999999888 9999999999999999999985 4332 1122234
Q ss_pred CccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 260 DADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 260 ~~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
.+|+++ ++|.+|.. .+|.+++++++.+.+.+.- +... .......|..+.++..++|+.+
T Consensus 283 ~PDiv~--~gK~lggG~~Piga~v~~~~i~~~~~~~~-~~~~----------------~~~T~~gnPl~~Aaala~L~~i 343 (460)
T PRK12403 283 EPDTLS--IAKGLTSGYVPMGGLVLSKRIAEALVEQG-GVFA----------------HGLTYSGHPVAAAVAIANLKAL 343 (460)
T ss_pred CCCeEE--EcccccccccceEEEEECHHHHHHHhcCC-Cccc----------------cCCCCCCCHHHHHHHHHHHHHH
Confidence 589997 56966532 3777778888776554210 0000 0001136777888888889988
Q ss_pred HHhCHHHHHHHHH-HHHHHHHHHHHh
Q 017640 338 STIGMQKIHAYEV-KWIICSIIVIQE 362 (368)
Q Consensus 338 ~~~g~~~i~~~~~-~l~~~l~~~l~~ 362 (368)
++.+ +.+++. ++.+++.+.|++
T Consensus 344 ~~~~---l~~~~~~~~g~~l~~~L~~ 366 (460)
T PRK12403 344 RDEG---VVTRVKDDTGPYLQRCLRE 366 (460)
T ss_pred Hhcc---HHHHHHHHHHHHHHHHHHH
Confidence 8754 345553 556666665543
No 344
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.55 E-value=4.8e-13 Score=122.28 Aligned_cols=256 Identities=18% Similarity=0.201 Sum_probs=163.9
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
+.+-.-+.+-+..+++++++....+..+- +.. .+.......+....+.+.+....++ +.++++++.+.|+..++
T Consensus 27 G~v~~t~lG~s~~~~e~iea~~~~~~~~v-~Le--~~l~~g~~~~R~~~~~~~~~~~~~a---ea~~ivnnn~aAVll~~ 100 (395)
T COG1921 27 GTVLMTNLGRSLYSPEAIEAMKEAMRAPV-ELE--TDLKTGKRGARLTELAELLCGLTGA---EAAAIVNNNAAAVLLTL 100 (395)
T ss_pred hhheeccCCCccCCHHHHHHHHHHhcccc-eee--eecccchhhHHHHHHHHHHhcccch---hheeeECCcHHHHHHHH
Confidence 33344445556788899998887776431 111 1111111222333444444444444 37788888888999999
Q ss_pred HHccCCCCCCCCEEEEcC-----CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 147 YSWGLSNLKSGDEVILTV-----AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~-----~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
.++ .. +.+++++- +.++. +...++..|+++++|... +.-...+++.+|.+++++++-.+.+|.
T Consensus 101 ~al----~~-~~EvVis~g~lV~gg~~~----v~d~~~~aG~~l~EvG~t--n~t~~~d~~~AIne~ta~llkV~s~~~- 168 (395)
T COG1921 101 NAL----AE-GKEVVVSRGELVEGGAFR----VPDIIRLAGAKLVEVGTT--NRTHLKDYELAINENTALLLKVHSSNY- 168 (395)
T ss_pred hhh----cc-CCeEEEEccccccCCCCC----hhHHHHHcCCEEEEeccc--CcCCHHHHHHHhccCCeeEEEEeeccc-
Confidence 877 44 44444432 33444 556667779999988743 334789999999999998887776654
Q ss_pred cc--ccCHHHHHHHHHhcCCEEEEecCCcCCcc-ccc---CCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCccc
Q 017640 222 AS--ILPIEEIVHWSHDVGAKVLVDACQSVPHM-VVD---VQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 222 G~--~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~~---~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~ 295 (368)
|. ..+.++++++||+||+++++|.+.+...- ..+ .-..++|++++|..|++|++-.|+++++++++++++..-.
T Consensus 169 ~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l 248 (395)
T COG1921 169 GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPL 248 (395)
T ss_pred cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchhcCCCccceEechHHHHHHHHhhhh
Confidence 33 34688999999999999999999875321 112 2245899999999998876668999999999988773322
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+ +.. .-+-..++++..+++.+........+.+...+.....+.|.
T Consensus 249 ~------------------Ral---rv~K~tla~l~~aLe~y~~~~~~~~~~~~~~~l~~~~~~l~ 293 (395)
T COG1921 249 K------------------RAL---RVDKETLAALEAALELYLQPEILGERLRTLRLLTQPAEALL 293 (395)
T ss_pred h------------------hhh---hcCcHhHHHHHHHHHHHcCchhhhhhhHHHHhhccHHHHHH
Confidence 1 112 33445677888888877764322333333333333344443
No 345
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.54 E-value=1.7e-12 Score=125.19 Aligned_cols=271 Identities=11% Similarity=0.089 Sum_probs=169.3
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+++..+......+ . ..+...++.+.|++.++..- +.++|+++++
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~--~----~~~~~~~lAe~L~~~~p~~~-~~v~f~~sGs 124 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAG--C----THEPAIELAERLAALTGGTL-GHAFFASDGA 124 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccc--c----CCHHHHHHHHHHHHhCCCCC-CEEEEeCCCH
Confidence 445677764 357889999999999988642111100 0 12334467888888776432 3899999999
Q ss_pred HHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCCC-----C------
Q 017640 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDDE-----S------ 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~~-----~------ 195 (368)
+|++.+++..... ....+.+|+....+||+.......+... ++ ..+..++..... .
T Consensus 125 eAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (453)
T PRK06943 125 SAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVA 204 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHH
Confidence 9999999875211 1123467999999999865332222110 00 012233322110 0
Q ss_pred -CCHHHHHHhcc---cCceEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCc
Q 017640 196 -PDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (368)
Q Consensus 196 -~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~ 261 (368)
-+++++++.+. +++.+|+++. ++...|.+.| +++|.++|++||+++|+||++. +|..- .+.....+
T Consensus 205 ~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~P 284 (453)
T PRK06943 205 ARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCC
Confidence 13466777774 4678999998 4888888776 8999999999999999999975 54331 12223469
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++.+ |.+|.. .+|.+++++++.+.+.+....+.. ......+.|..+.++..+.++.+++
T Consensus 285 Divt~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~---------------~~~~T~~gnpl~~aaa~a~L~~i~~ 347 (453)
T PRK06943 285 DFLCLS--KGISGGYLPLSLVLSRDAIFAAFYDDDVTRGF---------------LHSHSYTGNPLACRAALATLDLFAE 347 (453)
T ss_pred CeEeee--hhhccCcccceEEEEcHHHHHhhcccCccCCc---------------cCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999986 955422 389999999887655421100000 0001114577778888888888887
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+ +.++..++.+++.+.|+++
T Consensus 348 ~~---l~~~~~~~G~~l~~~L~~l 368 (453)
T PRK06943 348 DD---VLARNARKSARLRAALAPL 368 (453)
T ss_pred cC---HHHHHHHHHHHHHHHHHHH
Confidence 43 4556666666666666543
No 346
>PRK07481 hypothetical protein; Provisional
Probab=99.54 E-value=1.9e-12 Score=125.00 Aligned_cols=274 Identities=9% Similarity=-0.004 Sum_probs=166.7
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+..|.+.+++++.+......... .+ ...+...++.+.|+++++.+..+.+.|+++++
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~----~~-~~~~~~~~lae~L~~~~~~~~~~~v~f~~sGs 114 (449)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTF----DG-TTHPRAIELSYELIDMFAPEGMRRVFFSSGGS 114 (449)
T ss_pred CCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecc----cc-cCCHHHHHHHHHHHHhcCCCCCCEEEEcCchH
Confidence 445677763 35678999999999998864211100 00 01233446888888887422224899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCC----CC-CCHHH-
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDD----ES-PDLDK- 200 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~----~~-~d~~~- 200 (368)
+|++.+++..+... - ..+.+|+....+||+.......+... .+ ..+..++.+.. +. -|.+.
T Consensus 115 EAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~ 194 (449)
T PRK07481 115 DSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEEL 194 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHH
Confidence 99999998753210 0 12457899999999865432222110 00 01222222110 00 13333
Q ss_pred -------HHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCC
Q 017640 201 -------LKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLD 260 (368)
Q Consensus 201 -------l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~ 260 (368)
+++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....
T Consensus 195 ~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~ 274 (449)
T PRK07481 195 ARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCC
Confidence 344442 46799999999998898876 8999999999999999999976 4432 11223346
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++.+ |.+|.. .+|.+++++++.+.+.+.....+.. ........|..+.++..++++.++
T Consensus 275 PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~--------------~h~~T~~gnpl~~aaa~a~L~~l~ 338 (449)
T PRK07481 275 PDIMCLA--KGITSGYVPLGATMVNARIADAFEANADFGGAI--------------MHGYTYSGHPVACAAALATLDIVV 338 (449)
T ss_pred CCEEEEe--ecccCCCcCceEEEEcHHHHHHHhccCcccccc--------------ccCCCCCCCHHHHHHHHHHHHHHH
Confidence 9998886 965532 3889999998876654321000000 000011346666777778888777
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+ +.+.++.+++.+++.+.|+++
T Consensus 339 ~---~~l~~~~~~~g~~l~~~L~~l 360 (449)
T PRK07481 339 R---EDLPANAAKRGAYLLEGLQPL 360 (449)
T ss_pred h---hhHHHHHHHHHHHHHHHHHHH
Confidence 6 345666777777777766654
No 347
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.53 E-value=1.2e-12 Score=125.17 Aligned_cols=270 Identities=9% Similarity=0.003 Sum_probs=167.3
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+++.......... ...+...++.+.|++.+.... +.+.|+++++
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~------~~~~~~~~la~~L~~~~p~~~-~~v~f~~SGs 113 (428)
T PRK07986 41 DGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGG------ITHPPAIELCRKLVAMTPQPL-ECVFLADSGS 113 (428)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccc------cCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence 4556777643 46788999999999988643211100 012334567788888775432 3899999999
Q ss_pred HHHHHHHHHccCCC---CCCCCEEEEcCCCCcccHHHHHHHHH-------HcC---CEEEEEeCCCCC------CCCHHH
Q 017640 140 EAINLVAYSWGLSN---LKSGDEVILTVAEHHSAIVPWQLVAQ-------KTG---ANLKFLNLNDDE------SPDLDK 200 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~~~gd~vl~~~~~~~s~~~~~~~~~~-------~~g---~~v~~v~~~~~~------~~d~~~ 200 (368)
+|++.+++..+... -.++.+|+....+||+.......+.. .++ ..+..++..... .-|+++
T Consensus 114 EAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 193 (428)
T PRK07986 114 VAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAP 193 (428)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHH
Confidence 99999998653210 02356899999999985433222211 000 012223321110 125667
Q ss_pred HHHhcc---cCceEEEEccc-ccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEec
Q 017640 201 LKEMLS---RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVAS 267 (368)
Q Consensus 201 l~~~l~---~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s 267 (368)
+++.+. +++.+|+++.. +...|.+.| +++|.++|++||+++|+||+|. +|.. ..+.....+|+++
T Consensus 194 l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t-- 271 (428)
T PRK07986 194 FARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPDILC-- 271 (428)
T ss_pred HHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCCEEE--
Confidence 777775 35678888885 666676554 8999999999999999999984 3222 1122334688886
Q ss_pred CcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 268 SHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 268 ~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
++|.+|.. .+|.+++++++.+.+.+...+... .....+.+..+.++..++++.+++. .+
T Consensus 272 ~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~----------------~~~T~~g~p~~~aaa~a~L~~i~~~---~~ 332 (428)
T PRK07986 272 LGKALTGGTMTLSATLTTREVAETISNGEAGCFM----------------HGPTFMGNPLACAVANASLSLLESG---DW 332 (428)
T ss_pred echhhhCCcccCcchhchHHHHHHhhcCCCCccc----------------cCCCCCcCHHHHHHHHHHHHHHHhC---CH
Confidence 56965422 367788898887776532100000 0001145677777788888888764 34
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 017640 346 HAYEVKWIICSIIVIQER 363 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~ 363 (368)
.+++.++.+++.+.|+++
T Consensus 333 ~~~~~~~g~~l~~~l~~l 350 (428)
T PRK07986 333 QQQVAAIEAQLREELAPL 350 (428)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 677777778877777654
No 348
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=2.2e-12 Score=124.84 Aligned_cols=272 Identities=9% Similarity=0.029 Sum_probs=170.4
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+.+|.+.+++.+.+.........+ ...+...++.+.|++.+.... +.|.|+++++
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~------~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 117 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAG------FSHEPVIELSERLVKITPPGL-SRCFYADNGS 117 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccc------cCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 445677764 256789999999999988642111100 013444567888888775333 3899999999
Q ss_pred HHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHHHc------C---CEEEEEeCCCCC------------
Q 017640 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDDE------------ 194 (368)
Q Consensus 140 ~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~------g---~~v~~v~~~~~~------------ 194 (368)
+|++.+++..+.. .-..+.+|+.....||+.......+.... + ..+..+|.....
T Consensus 118 EAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~ 197 (466)
T PRK07030 118 SAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHS 197 (466)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHH
Confidence 9999999875221 01234578888999998654333221100 0 012223322110
Q ss_pred CCCHHHHHHhcc---cCceEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 195 SPDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 195 ~~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
.-+++.+++.+. .++.+|+++. ++...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+
T Consensus 198 ~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~P 277 (466)
T PRK07030 198 RRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCCC
Confidence 012455677774 4678999998 5777788776 8999999999999999999976 4432 112234469
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++.+ |.+|.. .+|.+++++++.+.+.......+.. ......+.|..+.++..+.++.+++
T Consensus 278 Div~~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~--------------~h~~T~~gnpla~aaa~a~L~~i~~ 341 (466)
T PRK07030 278 DFLCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAF--------------LHSHSYTGNPLACAAALATLDIFEQ 341 (466)
T ss_pred CEEeee--hhccCCcccceEEEecHHHHHHHhccccccccc--------------ccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 999986 955422 3899999998876543110000000 0001114577778888888888887
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
. .+.++.+++.+++.+.|+++
T Consensus 342 ~---~l~~~~~~~G~~l~~~L~~l 362 (466)
T PRK07030 342 D---NVIENNRALARRMAEATAHL 362 (466)
T ss_pred c---CHHHHHHHHHHHHHHHHHHH
Confidence 4 35677777777777777654
No 349
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=1.8e-12 Score=125.42 Aligned_cols=272 Identities=8% Similarity=0.044 Sum_probs=170.3
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+.+..+......+ . ..+...++.+.|++++.... +.+.|+++++
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~--~----~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 126 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLLG--L----ANVPSILLAEKLIEVVPEGL-KKVFYSDSGA 126 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccccc--c----CCHHHHHHHHHHHHhCCCCC-CEEEEeCCcH
Confidence 4556788642 46889999999999988742111100 0 12334578888888875332 3899999999
Q ss_pred HHHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHHc------C---CEEEEEeCCCC------CC-----
Q 017640 140 EAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDD------ES----- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~~------g---~~v~~v~~~~~------~~----- 195 (368)
+|++.+++..+... ...+.+|+.....||+.......+.... + ..+..+|.... +.
T Consensus 127 eAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~ 206 (460)
T PRK06916 127 TAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIV 206 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 99999998653110 1234689999999998654333321100 0 01223332210 00
Q ss_pred -CCHHHHHHhcc---cCceEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 196 -PDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 196 -~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
-+++.+++.++ .++.+|+++. ++...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+
T Consensus 207 ~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~P 286 (460)
T PRK06916 207 KKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTP 286 (460)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCC
Confidence 13556677774 4678999998 5888888765 8999999999999999999975 4332 112223468
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++.+ |.+|.. .+|.+++++++.+.+.+........ ......+.|..+.++..++++.+++
T Consensus 287 Div~~g--K~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~--------------~~~~T~~gnpl~~aaa~a~l~~l~~ 350 (460)
T PRK06916 287 DIMTAG--KGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTF--------------FHGHSYTGNPLGCAVALANLELYEK 350 (460)
T ss_pred Ceeeee--hhhhcCccccceeeecHHHHHHhhccccccCcc--------------ccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 988764 955432 3899999998876543211000000 0000113467777888888888876
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
. .+.++++++.+++.+.|+++
T Consensus 351 ~---~l~~~~~~~g~~l~~~l~~l 371 (460)
T PRK06916 351 T---NLIEQVARKTEYVATQLEDL 371 (460)
T ss_pred c---cHHHHHHHHHHHHHHHHHHh
Confidence 4 35677888888888777654
No 350
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.53 E-value=1.9e-12 Score=123.82 Aligned_cols=270 Identities=9% Similarity=0.025 Sum_probs=167.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..+.+.+++.+.++........+ ...+...++.+.|++.+..+- +.+.|+++++
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~------~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 110 (422)
T PRK05630 38 DGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGG------LTHEPAIKLTRKLLNLTDNGL-DHVFYSDSGS 110 (422)
T ss_pred CCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCC------cCCHHHHHHHHHHHhhCCCCc-CEEEEeCCcH
Confidence 455678864 357889999999999988642111100 012334467888888775332 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHHH-------cC---CEEEEEeCCCCCCCC-------H
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQK-------TG---ANLKFLNLNDDESPD-------L 198 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~~-------~g---~~v~~v~~~~~~~~d-------~ 198 (368)
+|++.+++..+... - ..+.+|+....+||+.......+... .+ ..+..+|.......+ .
T Consensus 111 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 190 (422)
T PRK05630 111 VSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYL 190 (422)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHH
Confidence 99999998653210 0 12357899999999855333222110 00 112333332111111 2
Q ss_pred HHHHHhcccCceEEEEccc-ccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecC
Q 017640 199 DKLKEMLSRKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASS 268 (368)
Q Consensus 199 ~~l~~~l~~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~ 268 (368)
+.+++.+..++.+|+++.. +...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+|+++.
T Consensus 191 ~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~-- 268 (422)
T PRK05630 191 RSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCV-- 268 (422)
T ss_pred HHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--
Confidence 4455556667899999985 787888776 8999999999999999999985 3321 11223346888855
Q ss_pred cCcCCC--CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 269 HKMCGP--TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 269 ~K~~g~--~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+|.++. ..+|.+++++++.+.+..... .+.. ........+....++..++++.+++. .+.
T Consensus 269 gK~l~gG~~p~~av~~~~~i~~~~~~~~~-~~~~--------------~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~ 330 (422)
T PRK05630 269 GKALTGGFMSFAATLCTDKVAQLISTPNG-GGAL--------------MHGPTFMANPLACAVAHASLEIIETG---MWR 330 (422)
T ss_pred echhhcCccccceeeccHHHHHHHhccCC-CCcc--------------ccCCCCcCCHHHHHHHHHHHHHHHhC---cHH
Confidence 596632 237888899988776542100 0000 00011146677777788888888764 345
Q ss_pred HHHHHHHHHHHHHHHh
Q 017640 347 AYEVKWIICSIIVIQE 362 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~ 362 (368)
+++.++.+++.+.|++
T Consensus 331 ~~~~~~g~~l~~~L~~ 346 (422)
T PRK05630 331 KQVKRIEAELIAGLSP 346 (422)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5777777777776654
No 351
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=3.3e-12 Score=123.48 Aligned_cols=261 Identities=11% Similarity=0.051 Sum_probs=163.9
Q ss_pred CeEEeccCC-----CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 67 KLVYLDNAA-----TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 67 ~~i~l~~~~-----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
+.-|+|..+ .|+..|.+.+++.+.+..+.... . ....+...++.+.|+++++... +.++|++|+++|
T Consensus 71 G~~ylD~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~---~----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGseA 142 (459)
T PRK06082 71 GKKYMDFHGNNVHQLGYGHPHVIEKVKEQMAKLPFSP---R----RFTNETAIECAEKLTEIAGGEL-NRVLFAPGGTSA 142 (459)
T ss_pred CCEEEEcccHhhcccCCCCHHHHHHHHHHHHhCCCcc---C----ccCCHHHHHHHHHHHHhCCCCC-CEEEECCCcHHH
Confidence 445677543 46789999999999988642211 0 0113445578888888886432 389999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCC----CC-C------CHHHH
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDD----ES-P------DLDKL 201 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~----~~-~------d~~~l 201 (368)
+..+++..+. ...+.+|+.....||+.......+... .+ ..+..++.... +. . +++.+
T Consensus 143 ve~AlklAr~--~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (459)
T PRK06082 143 IGMALKLARH--ITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYL 220 (459)
T ss_pred HHHHHHHHHH--hcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHH
Confidence 9999986532 234567888888888765322222110 00 01222332110 00 0 13457
Q ss_pred HHhcc--cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCc
Q 017640 202 KEMLS--RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKM 271 (368)
Q Consensus 202 ~~~l~--~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~ 271 (368)
++.++ .++.+|+++.+.+..+...| +++|.++|++||+++|+||++. +|.. ..+.....+|+++ ++|.
T Consensus 221 ~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~--~gKg 298 (459)
T PRK06082 221 EYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILC--IGKG 298 (459)
T ss_pred HHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEE--eccc
Confidence 77774 35789999998876433445 8999999999999999999977 3332 1122234689988 5697
Q ss_pred CCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 272 CGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 272 ~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
+|.. .+|.+++++++........ ..+ ....|..+.++..++++.+++. .+.++.
T Consensus 299 l~gG~~P~~av~~~~~i~~~~~~~~--------------------~~~-T~~gnpl~~aaa~a~L~~l~~~---~l~~~~ 354 (459)
T PRK06082 299 LGGGLVPIAAMITKDKYNTAAQISL--------------------GHY-THEKSPLGCAAALATIEVIEQE---GLLEKV 354 (459)
T ss_pred ccCCCCcceEEEEcHHHHhhccCCC--------------------CCC-CCCcCHHHHHHHHHHHHHHHhc---CHHHHH
Confidence 6643 2788888887643221100 001 1245666677778888888764 356777
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
.++.+++.+.|+++
T Consensus 355 ~~~g~~l~~~L~~l 368 (459)
T PRK06082 355 KADSQFMRERLLEM 368 (459)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777654
No 352
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.53 E-value=5.8e-12 Score=121.80 Aligned_cols=263 Identities=14% Similarity=0.123 Sum_probs=165.1
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC--CCcEEEe-C
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD--SGEIVFT-K 136 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~--~~~v~~t-~ 136 (368)
++.-|+|.. ..|+.+|.+.+++++++........ ... ..+...++.+.+.+.+...- .+.++|+ +
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~--~~~----~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~ 134 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHT--LDL----TTPVKDQFVQDLFASLPEAFAREAKIQFCGP 134 (464)
T ss_pred CCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccc--ccc----CCHHHHHHHHHHHHhCcccccccceEEEeCC
Confidence 455677763 3567899999999998864211110 001 12333356666777664321 1256665 7
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc------C---CEEEEEeCCCCCC------------
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDDES------------ 195 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~------g---~~v~~v~~~~~~~------------ 195 (368)
++++|++.+++..+. ...+.+|+.....||+.......+.... + ..+..++...+..
T Consensus 135 SGSEAve~AlklAr~--~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 212 (464)
T PRK06938 135 TGTDAVEAALKLVKT--ATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVR 212 (464)
T ss_pred CcHHHHHHHHHHHHH--hhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHH
Confidence 899999999997632 3445688888999998765444321100 0 1233444332111
Q ss_pred CCHHHHHHhccc------CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCC
Q 017640 196 PDLDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLD 260 (368)
Q Consensus 196 ~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~ 260 (368)
.+++.+++.+.+ ++.+|+++..+...|.+.| ++++.++|++||+++|+||++. +|.. ..+.....
T Consensus 213 ~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~ 292 (464)
T PRK06938 213 ANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGII 292 (464)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCC
Confidence 135677777753 5789999999888888776 8999999999999999999976 4332 12223346
Q ss_pred ccEEEecCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 261 ~d~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
+|+++.+ |.+|. ..+|.+++++++ +.+.+...+. ....|..+.++..+.++.+++
T Consensus 293 PDiv~~g--KglggG~PlsAv~~~~~~-~~~~~~~~~~---------------------T~~gnpla~Aaa~a~L~~l~~ 348 (464)
T PRK06938 293 PDVVVLS--KAIGGSLPLAVVVYREWL-DTWQPGAHAG---------------------TFRGNQMAMAAGSATLRYIKE 348 (464)
T ss_pred CCEEEee--ccccCCCceEEEeehhHh-hccCCCCCCC---------------------CCCcCHHHHHHHHHHHHHHHH
Confidence 9999986 95542 228888888774 4443221111 114566677777788887776
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+.++.+++.+++.+.|+++
T Consensus 349 ---~~l~~~~~~~G~~l~~~L~~l 369 (464)
T PRK06938 349 ---HRLAEHAAAMGERLREHLRQL 369 (464)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHH
Confidence 345567777777777766654
No 353
>PRK07483 hypothetical protein; Provisional
Probab=99.52 E-value=4e-12 Score=122.40 Aligned_cols=268 Identities=13% Similarity=0.074 Sum_probs=165.5
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.+|.+.+++.+.++..... +.+. . ..+...++.+.|++.+.... +.+.|+++++
T Consensus 28 dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~-~~~~-~----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 100 (443)
T PRK07483 28 TGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYA-HTSF-F----TTEPAEALADRLVAAAPAGL-EHVYFVSGGS 100 (443)
T ss_pred CCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCc-cccc-c----CCHHHHHHHHHHHHhCCCCC-CEEEEcCCcH
Confidence 4456777643 5678999999999998864211 1111 1 12334467788888775332 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHHH------cC---CEEEEEeCCCCCCC----------
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQK------TG---ANLKFLNLNDDESP---------- 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~~------~g---~~v~~v~~~~~~~~---------- 196 (368)
+|++.+++..+... - ..+.+|+.....||+.......+... .+ ..+..++....+..
T Consensus 101 EAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK07483 101 EAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAY 180 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHH
Confidence 99999998653210 0 22357888899999865433332110 00 01122322111110
Q ss_pred ---CHHHHHHhcc----cCceEEEEccccc-ccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCC
Q 017640 197 ---DLDKLKEMLS----RKTKLVVIHHISN-MLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGL 259 (368)
Q Consensus 197 ---d~~~l~~~l~----~~~~~v~~~~~~n-~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~ 259 (368)
.++.+++.+. +++.+|+++.++. ..|.+.| +++|.++|++||+++|+||++. +|.. ..+....
T Consensus 181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv 260 (443)
T PRK07483 181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC
Confidence 0255666553 4578999999875 3577666 8999999999999999999977 4332 1122234
Q ss_pred CccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 260 DADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 260 ~~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
.+|+++.+ |.+|.. .+|.+++++++.+.+.+.. +... .......|..+.++..+.++.+
T Consensus 261 ~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~-~~~~----------------h~~T~~gnpl~~aaa~a~l~~i 321 (443)
T PRK07483 261 APDLVTIA--KGLGAGYQPIGAVLASDRIYDAIADGS-GFFQ----------------HGHTYLGHATACAAALAVQRVI 321 (443)
T ss_pred CCCeeeeh--hhhccCccccEEEEEcHHHHHHHhcCC-Cccc----------------cCCCCCCCHHHHHHHHHHHHHH
Confidence 68999886 955432 3899999998876654210 0000 0001145677777888888888
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 338 STIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 338 ~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++. .+.++++++.+++.+.|++
T Consensus 322 ~~~---~l~~~~~~~g~~l~~~L~~ 343 (443)
T PRK07483 322 AED---GLLANVRARGEQLRARLRE 343 (443)
T ss_pred Hhc---CHHHHHHHHHHHHHHHHHH
Confidence 774 4566677777777776654
No 354
>PRK07480 putative aminotransferase; Validated
Probab=99.51 E-value=3.5e-12 Score=123.17 Aligned_cols=269 Identities=12% Similarity=-0.016 Sum_probs=163.3
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..|.+.+++.+.+..+.... ... ....+...++.+.|++.+.... +.+.|+++++
T Consensus 48 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~---~~~--~~~~~~~~~lae~L~~~~p~~~-~~v~f~~SGs 121 (456)
T PRK07480 48 EGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN---TFF--KTTHPPAIELAAKLAEVAPPGF-NHVFFTNSGS 121 (456)
T ss_pred CCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcc---ccc--ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCcH
Confidence 445678874 356789999999999988642111 000 0113444568888888875433 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHH------HcCC---EEEEEeCCCCC----CCC-----
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQ------KTGA---NLKFLNLNDDE----SPD----- 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~------~~g~---~v~~v~~~~~~----~~d----- 197 (368)
+|++.+++..+... - ..+.+|+.....||+.......+.. ..+. .+..++..... ..+
T Consensus 122 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (456)
T PRK07480 122 EANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFG 201 (456)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHH
Confidence 99999998653210 0 1245788888888885422111100 0010 11122211000 001
Q ss_pred ---HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCc
Q 017640 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (368)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~ 261 (368)
++.+++.+. .++.+|+++.++...|.+.| +++|.++|++||+++|+||++. +|..- .+.....+
T Consensus 202 ~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~P 281 (456)
T PRK07480 202 LAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCCCC
Confidence 255655552 46789999999988898877 9999999999999999999985 54331 12223468
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++.+ |.+|.. .+|.+++++++.+.+... .+... .....+.|..+.++..++|+.+++
T Consensus 282 Div~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~-~~~~~----------------~~~T~~gnpl~~Aaa~a~L~~l~~ 342 (456)
T PRK07480 282 DLMTIA--KGLTSGYIPMGAVGVGDRVAEVLIEE-GGEFN----------------HGFTYSGHPVAAAVALANLRILRD 342 (456)
T ss_pred Ceeeee--hhhccCCccceEEEEcHHHHHHHhcC-CCCcc----------------cCCCCCcCHHHHHHHHHHHHHHHh
Confidence 988775 965532 378888898887655210 00000 001125677788888888888887
Q ss_pred hCHHHHHHHH-HHHHHHHHHHHHh
Q 017640 340 IGMQKIHAYE-VKWIICSIIVIQE 362 (368)
Q Consensus 340 ~g~~~i~~~~-~~l~~~l~~~l~~ 362 (368)
.+ +.+++ +++.+++.+.|++
T Consensus 343 ~~---l~~~~~~~~g~~l~~~l~~ 363 (456)
T PRK07480 343 EG---IVERVRDDTGPYLQKRLRE 363 (456)
T ss_pred CC---HHHHHHHHHHHHHHHHHHH
Confidence 44 44455 3555555555544
No 355
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=5.4e-12 Score=110.97 Aligned_cols=258 Identities=12% Similarity=0.118 Sum_probs=179.1
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
.+.-|||.-+ .|++.|.+.+++++..+.+.-.. . ....+..-+..+.+.++||-+ .|+-++.+.
T Consensus 57 eGk~ylDflsaysaVnqGhchpki~~aLqeq~~kLtlss---r----afYnd~~~~f~~~vt~lf~~~---kvlpmnTGa 126 (427)
T KOG1402|consen 57 EGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADKLTLSS---R----AFYNDVLGEFAEYVTKLFGYD---KVLPMNTGA 126 (427)
T ss_pred CccchhhhhhhhhhcccCCCCHHHHHHHHHHHhHhhhhh---H----HHhhhhHHHHHHHHHHhcCcc---eeeecccch
Confidence 4455777632 55789999999999988653221 0 112566678999999999986 778888778
Q ss_pred HHHHHHHHHccCCC--CC--C-CC-EEEEcCCCCcccHHHHHHH------HHHcC----CEEEEEeCCCCCCCCHHHHHH
Q 017640 140 EAINLVAYSWGLSN--LK--S-GD-EVILTVAEHHSAIVPWQLV------AQKTG----ANLKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 140 ~a~~~~~~~~~~~~--~~--~-gd-~vl~~~~~~~s~~~~~~~~------~~~~g----~~v~~v~~~~~~~~d~~~l~~ 203 (368)
||.+.++...++.. .+ | .. .|+....+|++-......+ -..+| ..+..||.+ |.++|+.
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-----d~eale~ 201 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-----DAEALEV 201 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-----CHHHHHH
Confidence 99999987654111 11 2 22 3444455555421110000 00111 113334433 8899999
Q ss_pred hccc-CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-C---Ccc-cccCCCCCccEEEecCcCcCC
Q 017640 204 MLSR-KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-V---PHM-VVDVQGLDADFLVASSHKMCG 273 (368)
Q Consensus 204 ~l~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~---~~~-~~~~~~~~~d~~~~s~~K~~g 273 (368)
+++. +.+.++++.++..-|++.| +++..++|.+|++++|.|++|. + |.+ ..|.+...+|+++.. |.++
T Consensus 202 ~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilg--KalS 279 (427)
T KOG1402|consen 202 ALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILG--KALS 279 (427)
T ss_pred HhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEe--cccc
Confidence 9965 6799999999999999998 9999999999999999999997 2 222 446677789999987 8554
Q ss_pred --CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 017640 274 --PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVK 351 (368)
Q Consensus 274 --~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~ 351 (368)
...+..++++++++-.+.|.-.|.+. .-|.++.....++++.+.+ +.+.++...
T Consensus 280 GG~~Pvsavl~~~~im~~~~pgeHgsTy---------------------ggNpLg~~vaiAalevi~e---ekL~era~~ 335 (427)
T KOG1402|consen 280 GGVYPVSAVLADDDIMLNIKPGEHGSTY---------------------GGNPLGCAVAIAALEVIVE---EKLVERAAK 335 (427)
T ss_pred CCeeeeEEEEecHHHHhccCCCcccccc---------------------CCChHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 33478888899987777776654322 3456666677788888887 677888999
Q ss_pred HHHHHHHHHHhhc
Q 017640 352 WIICSIIVIQERH 364 (368)
Q Consensus 352 l~~~l~~~l~~~~ 364 (368)
|-..++.+|.+++
T Consensus 336 lG~~l~~~L~~l~ 348 (427)
T KOG1402|consen 336 LGEILRDQLNKLQ 348 (427)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999887763
No 356
>PRK07036 hypothetical protein; Provisional
Probab=99.50 E-value=3.3e-12 Score=123.72 Aligned_cols=273 Identities=10% Similarity=0.022 Sum_probs=167.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+.+|.+.+++.+.+.........+ ....+...++.+.|++.+...- +.|.|++|++
T Consensus 49 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~-----~~~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 122 (466)
T PRK07036 49 DGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFG-----DMTNAPAAELAAKLAELAPGDL-NHVFLTTGGS 122 (466)
T ss_pred CCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCccccccc-----ccCCHHHHHHHHHHHHhCCCCc-CEEEEeCCch
Confidence 445678863 346789999999999887642111000 0012334467777877764332 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHHHcC---------CEEEEEeCCCC----CCC------
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQKTG---------ANLKFLNLNDD----ESP------ 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g---------~~v~~v~~~~~----~~~------ 196 (368)
+|++.+++..+... - ..+.+|+....+||+.......+....+ ..+..++.... ...
T Consensus 123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 202 (466)
T PRK07036 123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC 202 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence 99999998652110 0 1246788888889886533222211100 11233332210 000
Q ss_pred --CHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc--cc---CCCCC
Q 017640 197 --DLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VD---VQGLD 260 (368)
Q Consensus 197 --d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--~~---~~~~~ 260 (368)
.++.+++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+||++. +|..- +- .....
T Consensus 203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~ 282 (466)
T PRK07036 203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQ 282 (466)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCC
Confidence 1234455443 35789999999998999887 9999999999999999999985 54431 11 22346
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++.+ |.+|.. .+|.+++++++.+.+.+....+.. + ..-...+.+..+.++..+.++.++
T Consensus 283 PDivt~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~----~----------~~~~T~~gnpl~~aaa~a~Le~i~ 346 (466)
T PRK07036 283 PDIITFA--KGLTSGYQPLGAVIISERLLDVISGPNAKGNV----F----------THGFTYSGHPVACAAALKNIEIME 346 (466)
T ss_pred CCEEEEc--cccccCccccEEEEEcHHHHHHHhcccCcCcc----c----------ccCCCCCCCHHHHHHHHHHHHHHH
Confidence 8988775 966532 388899999987765431000000 0 000011456677777888888887
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+. .+.++++++.+++.+.|.++
T Consensus 347 ~~---~l~~~~~~~g~~l~~~L~~l 368 (466)
T PRK07036 347 RE---GLCEHVREVGPYFEERLASL 368 (466)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHh
Confidence 63 45667777777777777543
No 357
>PRK06917 hypothetical protein; Provisional
Probab=99.50 E-value=7e-12 Score=120.87 Aligned_cols=269 Identities=11% Similarity=0.049 Sum_probs=165.7
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|.. ..|+..|.|.+++++.+........ . .. ..+...++.+.|++.+.... +.++|+++++
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~-~~----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 101 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-S-QF----TSEPAEKLAKKLSDLSPGDL-NWSFFVNSGS 101 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-c-cc----CCHHHHHHHHHHHHhCCCCC-CEEEEeCChH
Confidence 344577763 2567899999999999887421110 0 01 12344578888888875432 3789999999
Q ss_pred HHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHHHcCC---------EEEEEeCCCCCC-----------
Q 017640 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKTGA---------NLKFLNLNDDES----------- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---------~v~~v~~~~~~~----------- 195 (368)
+|++.+++..... ....+.+|+.....||+.......+....+. .+..++......
T Consensus 102 EAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 181 (447)
T PRK06917 102 EANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQ 181 (447)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHH
Confidence 9999999865211 1133468999999999876544332211000 112222110000
Q ss_pred -CCHHHHHHhcc----cCceEEEEcccccc-cccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCC
Q 017640 196 -PDLDKLKEMLS----RKTKLVVIHHISNM-LASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLD 260 (368)
Q Consensus 196 -~d~~~l~~~l~----~~~~~v~~~~~~n~-tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~ 260 (368)
-+++.+++.++ +++.+|+++..... .|.+.| +++|.++|++||+++|+||++. +|..- .+.....
T Consensus 182 ~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~ 261 (447)
T PRK06917 182 LACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC
Confidence 02456676664 35789999988764 456665 8999999999999999999986 33221 1122345
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+|+++.+ |.+|.. .+|.+++++++.+.+.+.. + .. ......+.|..+.++..++++.++
T Consensus 262 PDi~~~g--K~l~~G~~Pi~a~~~~~~i~~~~~~~~-~--~~--------------~~~~T~~gnpl~~aaa~a~l~~l~ 322 (447)
T PRK06917 262 PDIMTLG--KGLGAGYTPIAATVVSDRVMEPILRGS-R--SI--------------MSGHTLSANPLSAATALAVLEYME 322 (447)
T ss_pred CCEEEee--ehhccCCcceEEEEEcHHHHHHHhccC-c--cc--------------ccccCCCCCHHHHHHHHHHHHHHH
Confidence 8987765 966532 3788889988876554211 0 00 000011456777888888888887
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+. .+.+++.++.+++.+.|+++
T Consensus 323 ~~---~l~~~~~~~g~~l~~~L~~l 344 (447)
T PRK06917 323 KH---NLPEKAAEKGEYLIKGLQKV 344 (447)
T ss_pred HC---CHHHHHHHHHHHHHHHHHHH
Confidence 64 35566777777777766654
No 358
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.50 E-value=5e-12 Score=121.18 Aligned_cols=270 Identities=9% Similarity=0.001 Sum_probs=166.9
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|||..+ .|+..|.+.+++.+.+.+...... .. . ..+...++.+.|++.+...- +.|.|+++++
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~-~----~~~~~~~lae~L~~~~p~~~-~~v~f~~sGs 114 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-GG-F----THEPAVELAQKLLEILPPSL-NKIFFADSGS 114 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-cc-c----CCHHHHHHHHHHHhhCCCCc-CEEEEeCCch
Confidence 4456888643 467889999999998886421111 00 0 12334578888888775333 3899999999
Q ss_pred HHHHHHHHHccCCC---C-CCCCEEEEcCCCCcccHHHHHHHHH----H---cC---CEEEEEeCCCCC------CCCHH
Q 017640 140 EAINLVAYSWGLSN---L-KSGDEVILTVAEHHSAIVPWQLVAQ----K---TG---ANLKFLNLNDDE------SPDLD 199 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~~~----~---~g---~~v~~v~~~~~~------~~d~~ 199 (368)
+|++.+++..+... - ..+.+|+.....||+.......+.. . .+ ..+..+|..... .-+++
T Consensus 115 eAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~ 194 (429)
T PRK06173 115 VAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIE 194 (429)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHH
Confidence 99999998753210 1 1245788888888885322111100 0 00 012233321100 11356
Q ss_pred HHHHhcc---cCceEEEEccc-ccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEe
Q 017640 200 KLKEMLS---RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVA 266 (368)
Q Consensus 200 ~l~~~l~---~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~ 266 (368)
.|++.+. .++.+|+++.. +...|.+.| +++|.++|++||+++|+||+|. +|.. ..+.....+|+++
T Consensus 195 ~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~- 273 (429)
T PRK06173 195 PLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMC- 273 (429)
T ss_pred HHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchHHHhcCCCCCEEE-
Confidence 6777774 46789999996 888888765 8999999999999999999984 2221 1122234689887
Q ss_pred cCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 017640 267 SSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (368)
Q Consensus 267 s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~ 344 (368)
++|.+|.. .++.+++++++.+.+.+...+... .......+....++..++++.+++. .
T Consensus 274 -~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~----------------~~~T~~g~p~~~aaa~a~l~~i~~~---~ 333 (429)
T PRK06173 274 -IGKALTGGYLTLSATITTEAIAQTICSGEAKCFM----------------HGPTFMANPLACAIAAESIRLLLES---P 333 (429)
T ss_pred -eehhhhCCccccceEEecHHHHHHHhcCCCCccc----------------cCCCCCcCHHHHHHHHHHHHHHHhC---C
Confidence 57965422 268888888877665421100000 0001135677777888888888774 3
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 017640 345 IHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~ 363 (368)
+.++++++.+++.+.|++.
T Consensus 334 ~~~~~~~~g~~l~~~L~~~ 352 (429)
T PRK06173 334 WQQNIQRIEAQLKQELAPA 352 (429)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4677888888888877654
No 359
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.49 E-value=1.9e-14 Score=130.41 Aligned_cols=230 Identities=18% Similarity=0.250 Sum_probs=56.8
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
-.+.++++.+++.+....+. |....... +.. ......+.+.++.+.|+++ -+++++...|+.+++.++ .
T Consensus 15 Rs~l~~~a~~a~~~~a~~Y~-nLE~dl~~-G~R-g~R~~~v~~ll~~ltgAea---A~VvNnnaAAv~L~l~~l-----a 83 (367)
T PF03841_consen 15 RSPLSEEAIEAVAEVASGYS-NLEYDLET-GKR-GSRYAHVEELLCELTGAEA---ALVVNNNAAAVLLALNTL-----A 83 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc-cccccccc-ccc-ccccccccccccccccccc---cccccccccccccccccc-----c
Confidence 34778888888876655431 11111111 111 2224467888999999974 366777678999998876 3
Q ss_pred CCCEEEEcCCCCcccHHH--HHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc--cc--ccCHHH
Q 017640 156 SGDEVILTVAEHHSAIVP--WQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML--AS--ILPIEE 229 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~--~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t--G~--~~~l~~ 229 (368)
+|.+|+++..+-.-+-.. +..+.+..|+++++|-.. | .-.+++++++|+++|.+++..|.+|.. |. ..++++
T Consensus 84 ~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt-N-~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~e 161 (367)
T PF03841_consen 84 KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT-N-RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEE 161 (367)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred cccccccccccccccccccccccccccccccccccccc-c-ccccccccccccccccccccccccccccccccccccHHH
Confidence 577888887654432222 334566779999888754 2 225788999999999999988887773 32 336999
Q ss_pred HHHHHHhcCCEEEEecCCc---------CCccc--ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCc
Q 017640 230 IVHWSHDVGAKVLVDACQS---------VPHMV--VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGE 298 (368)
Q Consensus 230 i~~l~~~~g~~li~D~a~~---------~~~~~--~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~ 298 (368)
+++++++|++++++|...+ ++..| .+.-+.++|++++|..|++|++..|++++++++|++++..--+
T Consensus 162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQaGiI~Gkk~lI~~lk~~pl~-- 239 (367)
T PF03841_consen 162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQAGIIVGKKELIEKLKKHPLG-- 239 (367)
T ss_dssp HHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S-EEEEEEHHHHHHHHHHHHT--
T ss_pred HHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCCeEEEEeCHHHHHHHhhCCCc--
Confidence 9999999999999999974 22221 1223458999999999988877789999999999987622110
Q ss_pred ceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
+.+ ..+-..++++.++++.+.+
T Consensus 240 ----------------Ral---rvdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 240 ----------------RAL---RVDKLTLAALEATLRLYLD 261 (367)
T ss_dssp ----------------TT----B--HHHHHHHHHHHHH---
T ss_pred ----------------ceE---eeCHHHHHHHHHHHHHHHH
Confidence 112 3456678888888887664
No 360
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=9.4e-12 Score=120.44 Aligned_cols=269 Identities=11% Similarity=0.035 Sum_probs=164.2
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC----CCCcEEEe
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS----DSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~----~~~~v~~t 135 (368)
++.-|+|.. ..|+..|.+.+++.+.+..+......+ . ..+...++.+.|++.+... .-+.|.|+
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~--~----~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~ 135 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAG--F----THEPAVQLAEQLLAIAPRQDGRAPLSKVFYA 135 (472)
T ss_pred CCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccc--c----CCHHHHHHHHHHHHhCCCcccCCCCCEEEEe
Confidence 445677764 356789999999999887642211100 1 1233446777888877531 12389999
Q ss_pred CCHHHHHHHHHHHccCCCC----CCCCEEEEcCCCCcccHHHHHHHHHHc------C---CEEEEEeCCCCCC-------
Q 017640 136 KNATEAINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQKT------G---ANLKFLNLNDDES------- 195 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~~~~------g---~~v~~v~~~~~~~------- 195 (368)
+++++|++.+++..+.... ..+.+|+....+||+............ + ..+..+|......
T Consensus 136 ~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~ 215 (472)
T PRK08742 136 DNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA 215 (472)
T ss_pred CCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCH
Confidence 9999999999987532100 224679999999998654333221100 0 0122333321110
Q ss_pred -----CCHHHHHHhcc---cCceEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCC
Q 017640 196 -----PDLDKLKEMLS---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQ 257 (368)
Q Consensus 196 -----~d~~~l~~~l~---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~ 257 (368)
.+++.+++.+. .++.+|+++. .++..|.+.| ++++.++|++||+++|+||++. +|..- .+..
T Consensus 216 ~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~ 295 (472)
T PRK08742 216 EDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQA 295 (472)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhc
Confidence 12566677664 4678999998 5777888766 8999999999999999999976 54331 2222
Q ss_pred CCCccEEEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 017640 258 GLDADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID 335 (368)
Q Consensus 258 ~~~~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~ 335 (368)
...+|+++.+ |.+|.. .+|.+++++++.+.+.+....+.. ......+.+..+.++..++++
T Consensus 296 gv~PDiv~~g--Kgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~---------------~h~~T~~gnpl~~Aaa~a~L~ 358 (472)
T PRK08742 296 GVMPDLLCLS--KGLTGGFLPLSAVLATQQLYDAFLDDSRERAF---------------LHSHSYTGNPLACAAALATLD 358 (472)
T ss_pred CCCCCEEEEc--ccccCCCCCcceeeccHHHHHHhhccCccCcc---------------CcCCCCCccHHHHHHHHHHHH
Confidence 3469999986 965432 388899999887654321100000 000111457777888888888
Q ss_pred HHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 336 YLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 336 ~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
.+++.+ +.++..++.+++.+.+
T Consensus 359 ~i~~~~---l~~~~~~~g~~l~~~~ 380 (472)
T PRK08742 359 IFADDD---VIARNQPTAARMTQLA 380 (472)
T ss_pred HHHHCC---HHHHHHHHHHHHHHHH
Confidence 888754 3444444444444433
No 361
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.47 E-value=6.5e-13 Score=119.92 Aligned_cols=219 Identities=14% Similarity=0.172 Sum_probs=125.9
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhcc--CCCCcchhhH-HHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSN--VHRGIHFLSA-KATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
..||-. .|.+.+++++--...+.-.... ...|....+| +..+.+.++|+.+++++|++.+ +|++..+++-.++.-
T Consensus 25 L~Ldmt-RGKPs~eQLdLS~~lL~~~~~~~~~~dG~D~RNY~G~l~Gipe~r~l~a~llgv~~~-~viv~gNSSL~lM~d 102 (425)
T PF12897_consen 25 LKLDMT-RGKPSPEQLDLSNPLLDLPGSSDYLADGTDCRNYPGGLDGIPEARELFAELLGVPPE-NVIVGGNSSLNLMHD 102 (425)
T ss_dssp --EES----S--HHHHHGGGGGGGSSTTCCBECTTEBTTSS-S-SS--HHHHHHHHHHHTS-GG-GEEE-SS-HHHHHHH
T ss_pred CCcccC-CCCCCHHHHhhhHHHhcCCCCccccCCCccccCCCCccCChHHHHHHHHHHhCCCHH-HEEEeccchHHHHHH
Confidence 355543 3455555555433333221111 1134555667 7788899999999999999986 887776655433322
Q ss_pred H--HHccC------CCCC--CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--Cce-EE
Q 017640 146 A--YSWGL------SNLK--SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTK-LV 212 (368)
Q Consensus 146 ~--~~~~~------~~~~--~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~-~v 212 (368)
. .++.. .++. +.-+.+++.|.|- -...+++.+|++++.||.+++|. |++.+|+.+.+ .+| +.
T Consensus 103 ~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYD----RHFai~E~~Giemi~VpM~~dGP-DmD~Ve~LV~~D~svKGiW 177 (425)
T PF12897_consen 103 TISRAMLHGVPGSETPWCKEEKVKFLCPVPGYD----RHFAITEHFGIEMIPVPMTEDGP-DMDMVEELVAEDPSVKGIW 177 (425)
T ss_dssp HHHHHHHH--TT-SS-GGGSS--EEEEEES--H----HHHHHHHHCT-EEEEEEEETTEE--HHHHHHHTHTSTTEEEEE
T ss_pred HHHHHHhcCCCCCCCCchhccCceEEecCCCch----HHHHHHHhhCcEEEecCCCCCCC-CHHHHHHHHhcCCccceEE
Confidence 2 22100 1111 2337899999554 45677888999999999999988 99999999854 344 56
Q ss_pred EEcccccccccccCHHHHHHHH----HhcCCEEEEecCCcCCccc--------ccC-------CCCCccEEEecCcC-cC
Q 017640 213 VIHHISNMLASILPIEEIVHWS----HDVGAKVLVDACQSVPHMV--------VDV-------QGLDADFLVASSHK-MC 272 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~----~~~g~~li~D~a~~~~~~~--------~~~-------~~~~~d~~~~s~~K-~~ 272 (368)
|++-.+||||.+++-+.+.+++ ...++.|+.|.+|++.++- +++ ...+..+...|.|| .|
T Consensus 178 cVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf 257 (425)
T PF12897_consen 178 CVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITF 257 (425)
T ss_dssp E-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-
T ss_pred eCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccccc
Confidence 7899999999999966555555 3679999999999976651 111 11245688889999 89
Q ss_pred CCCcceEEEEcccccccCCCcc
Q 017640 273 GPTGIGFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 273 g~~G~G~l~~~~~li~~l~~~~ 294 (368)
.+.|++++..+++-++.+...+
T Consensus 258 ~GaGva~~aaS~~Nl~~~~~~~ 279 (425)
T PF12897_consen 258 PGAGVAFFAASEANLAWIKKHL 279 (425)
T ss_dssp TTSS-EEEEE-HHHHHHHHHHH
T ss_pred CCcceeeeecCHHHHHHHHHHh
Confidence 9999999999998887766443
No 362
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.47 E-value=3.6e-12 Score=128.98 Aligned_cols=282 Identities=12% Similarity=0.063 Sum_probs=191.6
Q ss_pred eEEeccCCCCCC-cHHHHHHHHHHHHHhhcc-CCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 68 LVYLDNAATSQK-PIAVLKALQNYYEAYNSN-VHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 68 ~i~l~~~~~~~~-~~~v~~a~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
..|++.+.+... |..+.+.+.+.-..+..+ |+ +...+++..+.+-+.+..++++.|.+-. +--+-.++|.+-+.+
T Consensus 81 ~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPY--QpEisQG~Lqal~e~Qtmi~~LtGm~va-NASl~D~atA~aEA~ 157 (954)
T PRK12566 81 TSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPY--QPEIAQGRLEALLNFQQMTIDLTGLDLA-NASLLDEATAAAEAM 157 (954)
T ss_pred cccccccccCCcCcHHHHHHHHhCchhhhcCCCC--CchhhhHHHHHHHHHHHHHHHHhCchhh-hhhhccchhHHHHHH
Confidence 358888888854 544536665432222222 22 2235677788888999999999999843 334555666655555
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
+++.+.. -.++.++++++..|+.+..-++..++..|.+++. +++++.+..++..|++.+|+ ..|.+.
T Consensus 158 ~ma~~~~-~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~~~~~~~~~~~v~vq~P~-~~G~i~ 224 (954)
T PRK12566 158 ALAKRVA-KSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAVDNLAAHAVFGALLQYPD-THGEIR 224 (954)
T ss_pred HHHHHHh-hcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cchhhcCCCCEEEEEEECCC-CceEEc
Confidence 5444210 1125689999999999888888888888888874 23444566678888898885 579999
Q ss_pred CHHHHHHHHHhcCCEEEEecCCc--CCcccccCCCCCccEEEecCcC-----cCCCCcceEEEEcccccccCCCcccCCc
Q 017640 226 PIEEIVHWSHDVGAKVLVDACQS--VPHMVVDVQGLDADFLVASSHK-----MCGPTGIGFLFGKSDLLSAMPPFLGGGE 298 (368)
Q Consensus 226 ~l~~i~~l~~~~g~~li~D~a~~--~~~~~~~~~~~~~d~~~~s~~K-----~~g~~G~G~l~~~~~li~~l~~~~~g~~ 298 (368)
++++|.+++|++|.+++ +++.- ++.+ -...+++.|+++++.+- .||+++.|++.+++++.+.+...+.|-+
T Consensus 225 d~~~i~~~~h~~gal~~-~~~d~laL~ll-~~Pge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s 302 (954)
T PRK12566 225 DLRPLIDQLHGQQALAC-VAADLLSLLVL-TPPGELGADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVS 302 (954)
T ss_pred cHHHHHHHHHHcCCEEE-EEeCHHHHhCC-CChhhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCcccee
Confidence 99999999999998755 44433 2222 13456899999998775 3666679999999999999887777654
Q ss_pred ceeecccCC---CCCCCCCCCCCCCCCCHHHHHH---HHHHHH--HHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 017640 299 MISDVFLDH---STFADPPSRFEAGTPAIGEAIG---LGAAID--YLSTIGMQKIHAYEVKWIICSIIVIQERHNTTL 368 (368)
Q Consensus 299 ~~~~~~~~~---~~~~~~~~~~~~gt~~~~~~~a---~~~al~--~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t~ 368 (368)
....-...+ ..-.+.+-|.+-.|.|+..--+ +.+++- ++-..|++.+.+++..++.++.+.|.+ .|+++
T Consensus 303 ~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~ 379 (954)
T PRK12566 303 RDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKR 379 (954)
T ss_pred ecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCcc
Confidence 322111100 1112344677888888874433 333332 444568999999999999999999988 67653
No 363
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.47 E-value=2.2e-12 Score=115.77 Aligned_cols=175 Identities=23% Similarity=0.322 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEe--CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHH-------HHH
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFT--KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-------AQK 180 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t--~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~-------~~~ 180 (368)
....+.+.+..|+.||+++ .+|-. -|+|.||.+++.++ ++|||+++..+..-+-+....... .+.
T Consensus 53 D~GRd~le~iyA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~----LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e 126 (403)
T PF06838_consen 53 DIGRDKLERIYADVFGAED--ALVRPQFVSGTHAIALALFGV----LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKE 126 (403)
T ss_dssp -HHHHHHHHHHHHHCT-SE--EEEETTS-SHHHHHHHHHHHH------TT-EEEESSSS--CCHHHHHTSSSSSSSSTGG
T ss_pred CccHHHHHHHHHHHhCchh--hhhcccccchHHHHHHHHHhc----CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHH
Confidence 3456678889999999984 34422 47789999999999 999999998766544443222211 145
Q ss_pred cCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc-cccCHHHHH---HHHHh--cCCEEEEecCCcCCcccc
Q 017640 181 TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA-SILPIEEIV---HWSHD--VGAKVLVDACQSVPHMVV 254 (368)
Q Consensus 181 ~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG-~~~~l~~i~---~l~~~--~g~~li~D~a~~~~~~~~ 254 (368)
.|++...|++.+++.+|.+.+++++++++|+|.+.-...-+- .-+++++|. +++|+ .++++++|.+|+-.....
T Consensus 127 ~Gi~Y~~v~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~ 206 (403)
T PF06838_consen 127 FGIKYREVPLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ 206 (403)
T ss_dssp GT-EEEE--B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS
T ss_pred hCceeEEEeecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc
Confidence 688999999999999999999999999999999877632211 112345544 44554 479999999999666666
Q ss_pred cCCCCCccEEEecCcCcCC----CCcceEEEEcccccccCC
Q 017640 255 DVQGLDADFLVASSHKMCG----PTGIGFLFGKSDLLSAMP 291 (368)
Q Consensus 255 ~~~~~~~d~~~~s~~K~~g----~~G~G~l~~~~~li~~l~ 291 (368)
+....+.|++.+|+-|.-| |. .|+++.++++++...
T Consensus 207 EP~~vGADl~aGSLIKNpGGgiApt-GGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 207 EPTEVGADLMAGSLIKNPGGGIAPT-GGYIAGRKDLVERAA 246 (403)
T ss_dssp -GGGGT-SEEEEETTSGGGTTT-SS--EEEEESHHHHHHHH
T ss_pred CccccchhheeccceeCCCCCccCc-CCEEechHHHHHHHH
Confidence 6667899999999999543 44 699999999998755
No 364
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.47 E-value=3.4e-13 Score=120.93 Aligned_cols=157 Identities=19% Similarity=0.238 Sum_probs=118.9
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcEEEeCCHHHHHHHHHHHccCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVFTKNATEAINLVAYSWGLSN 153 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~t~g~t~a~~~~~~~~~~~~ 153 (368)
.|..+++...+.+....+ ..|. +.....++-+|+.+|+++... .+++|.+|.|++.|+..++..+.
T Consensus 87 fp~Dai~RA~~~L~~~gG--s~Ga----YS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~--- 157 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGG--SLGA----YSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLI--- 157 (475)
T ss_pred CCHHHHHHHHHHHHhcCC--cccc----cccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHh---
Confidence 455555555556655433 1233 333455667888888888544 23499999999999999999883
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhccc-----CceEEEEcccccccccccC
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSR-----KTKLVVIHHISNMLASILP 226 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG~~~~ 226 (368)
-.+++.|+++-|.|+=.-.. ....|...+..-+++ +|.+|.++|++.+++ +++++++.+|.||||.+.+
T Consensus 158 ~~~~~GvliPiPQYPLYsAt----i~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls 233 (475)
T KOG0258|consen 158 AGKKTGVLIPIPQYPLYSAT----ISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLS 233 (475)
T ss_pred cCCCCceEeecCCCchhHHH----HHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhc
Confidence 45788999999988864332 234477776666664 599999999988764 6799999999999999998
Q ss_pred ---HHHHHHHHHhcCCEEEEecCCc
Q 017640 227 ---IEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 227 ---l~~i~~l~~~~g~~li~D~a~~ 248 (368)
+++|..+|+++|+.++.|++|-
T Consensus 234 ~e~ie~i~~fa~~~~l~llaDEVYQ 258 (475)
T KOG0258|consen 234 EENIEGIICFAAEEGLVLLADEVYQ 258 (475)
T ss_pred HHHHHHHHHHHHHcCeEEechHHHH
Confidence 8899999999999999999964
No 365
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.46 E-value=1.8e-12 Score=117.56 Aligned_cols=251 Identities=12% Similarity=0.055 Sum_probs=167.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC----------C-EEEEcCCCCcccH
Q 017640 103 HFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG----------D-EVILTVAEHHSAI 171 (368)
Q Consensus 103 ~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g----------d-~vl~~~~~~~s~~ 171 (368)
+...+.+.-+..++-..+.+..|.+...+-+|++|++-++..++...+.. .-|+ + .+..++.+|+|+.
T Consensus 133 YEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk-~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ 211 (510)
T KOG0629|consen 133 YEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYK-NFPEVKTKGMFALPPLILFTSEESHYSIK 211 (510)
T ss_pred EEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhh-cCchhhhhhhhcCCcEEEEecccchhhHH
Confidence 33334444455567777778888876446789998888877777654321 1122 2 4556677888854
Q ss_pred HHHHHHHHHcC---CEEEEEeCCCCCCCCHHHHHHhccc---C---ceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 172 VPWQLVAQKTG---ANLKFLNLNDDESPDLDKLKEMLSR---K---TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 172 ~~~~~~~~~~g---~~v~~v~~~~~~~~d~~~l~~~l~~---~---~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
. .+...| -.++.|+.++.|.+++++||++|.. + |-+|..+..++.-|...|++.|+++|++|++|++
T Consensus 212 k----aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmH 287 (510)
T KOG0629|consen 212 K----AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKLWMH 287 (510)
T ss_pred H----HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCEEEE
Confidence 4 344445 4789999999999999999999853 2 6788999999999999999999999999999999
Q ss_pred EecCCcCCccccc------CC-CCCccEEEecCcCcCC-CCcceEEEEccc-ccccCCCcccCCcceeecccCC----CC
Q 017640 243 VDACQSVPHMVVD------VQ-GLDADFLVASSHKMCG-PTGIGFLFGKSD-LLSAMPPFLGGGEMISDVFLDH----ST 309 (368)
Q Consensus 243 ~D~a~~~~~~~~~------~~-~~~~d~~~~s~~K~~g-~~G~G~l~~~~~-li~~l~~~~~g~~~~~~~~~~~----~~ 309 (368)
+|+|.+-|.+ ++ +. -...+.++.+.||+.| |--|+.++.+.+ ++..+..... .+++... ..
T Consensus 288 vDAAwGGglL-mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A-----~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 288 VDAAWGGGLL-MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSA-----IYLFQQDKFYDVS 361 (510)
T ss_pred eecccccccc-cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccch-----hhhhccCceeecc
Confidence 9999986554 11 11 1257899999999887 444888888775 3444332221 1222111 11
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 310 FADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 310 ~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+.......+.|...- +.-+....+.....|.++-.+++.++++|+.++|++..++
T Consensus 362 ~DTgdK~iQCGRh~D--~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~ 416 (510)
T KOG0629|consen 362 YDTGDKAIQCGRHVD--VFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGF 416 (510)
T ss_pred cccccchhhcCcccc--HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 222223333332111 1122223333334488899999999999999999998774
No 366
>PRK06148 hypothetical protein; Provisional
Probab=99.45 E-value=1.4e-11 Score=129.34 Aligned_cols=262 Identities=15% Similarity=0.155 Sum_probs=168.7
Q ss_pred CCeEEeccC----CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 66 KKLVYLDNA----ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 66 ~~~i~l~~~----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
++.-|+|.. ..|+..|.|.+++.+.+..+..+. . + ..+...++.+.|++.+..+- +.+.|++|+++|
T Consensus 622 dG~~ylD~~~g~~~lGH~hp~v~~Ai~~q~~~l~~~~--~-~-----~~~~~~~lAe~L~~~~p~~~-~~v~f~nSGsEA 692 (1013)
T PRK06148 622 RGRAYLDCFNNVCHVGHAHPRVVAAAARQAARLNTNT--R-Y-----LHDAIVAYAERLTATLPDGL-TVAFFVNSGSEA 692 (1013)
T ss_pred CCCEEEEcccChhhcCCCCHHHHHHHHHHHhhcCCcC--C-c-----CCHHHHHHHHHHHHhCCCCc-CEEEEeCCcHHH
Confidence 455677763 466889999999999988753221 1 1 13344567788888775332 378999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHH-----HcC----CEEEEEeCCCC----CC-CC-------HHH
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KTG----ANLKFLNLNDD----ES-PD-------LDK 200 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-----~~g----~~v~~v~~~~~----~~-~d-------~~~ 200 (368)
++.+++..+. ...+..|+....+||+.......+.. ..+ ..+..++.... +. .+ .+.
T Consensus 693 ~e~AlklAr~--~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 770 (1013)
T PRK06148 693 NSLALRLARA--HTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES 770 (1013)
T ss_pred HHHHHHHHHH--hcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence 9999997632 34456788889999886543222110 001 01212221100 10 01 134
Q ss_pred HHHhcc------cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc-----ccCCCCCccEE
Q 017640 201 LKEMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV-----VDVQGLDADFL 264 (368)
Q Consensus 201 l~~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~-----~~~~~~~~d~~ 264 (368)
+++.+. .++.+|+++......|.+.| ++++.++|++||+++|+||++. +|..- .+.....+|++
T Consensus 771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv 850 (1013)
T PRK06148 771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV 850 (1013)
T ss_pred HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee
Confidence 554443 35789999999988898887 9999999999999999999985 54331 22233468998
Q ss_pred EecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 265 VASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 265 ~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
+.+ |.+| +..+|.+++++++.+.+.+... .+.....|..+.++..+.++.+++.
T Consensus 851 t~g--K~lggG~Plgav~~~~ei~~~~~~g~~--------------------~~~Tf~gnpla~aaa~a~L~~i~~e--- 905 (1013)
T PRK06148 851 TMG--KPIGNGHPMGAVVTTREIADSFDNGME--------------------YFNTFGGNPVSCAIGLAVLDIIEDE--- 905 (1013)
T ss_pred eec--ccccCCcceEEEEEcHHHHhhccCCCc--------------------cccCCCCCHHHHHHHHHHHHHHhhc---
Confidence 875 9655 3338999999988776543110 0111145667777777888888764
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 017640 344 KIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.+++.++.+++.+.|+++
T Consensus 906 ~l~~~~~~~G~~l~~~L~~l 925 (1013)
T PRK06148 906 DLQRNALEIGNYLLAGLREL 925 (1013)
T ss_pred cHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777776654
No 367
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.44 E-value=5.5e-11 Score=115.02 Aligned_cols=263 Identities=14% Similarity=0.106 Sum_probs=161.5
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC-CCcE-EEeCC
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEI-VFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~v-~~t~g 137 (368)
++--|+|..+ .|+.+|.+.+++++.+...... + ... ...+...++.+.|++.+.... ...+ +++++
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~-~-~~~----~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~S 129 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL-H-TLD----LTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPS 129 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccc-c-ccc----cCCHHHHHHHHHHHHhCCCccccceEEEeCCC
Confidence 3456777732 4678999999999988752111 0 000 113444467777888775321 1134 55689
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc---------CCEEEEEeCCCCCC--------CCHHH
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDES--------PDLDK 200 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~v~~~~~~~--------~d~~~ 200 (368)
+++|++.+++..+. ...++.|+.....||+.......+.... ...+..++...... -+.+.
T Consensus 130 GsEAve~AlklAr~--~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (459)
T PRK06931 130 GADAVEAAIKLAKT--YTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKA 207 (459)
T ss_pred cHHHHHHHHHHHHH--hcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHH
Confidence 99999999987532 3456689999999998765544332110 01233344321110 02222
Q ss_pred H----HHhcc------cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 201 L----KEMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 201 l----~~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
+ ++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+
T Consensus 208 ~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~P 287 (459)
T PRK06931 208 LTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEP 287 (459)
T ss_pred HHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCC
Confidence 2 33332 24789999999988888876 8999999999999999999976 4432 112233469
Q ss_pred cEEEecCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 262 DFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 262 d~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
|+++.+ |.+|. ..+|.+..++++ +.+.+...++ ....|..+.++..+.++.+++.
T Consensus 288 Divt~g--K~l~gG~Pi~av~~~~~~-~~~~~~~~~~---------------------T~~gnpla~aaala~L~~l~~~ 343 (459)
T PRK06931 288 DIIVMS--KAVGGGLPLAVLGIKKEF-DAWQPGGHTG---------------------TFRGNQLAMATGLTTLKILKEE 343 (459)
T ss_pred CEEEec--ccccCCcceeeeeeHHHH-hhccCCCCCC---------------------CCCCCHHHHHHHHHHHHHHHhC
Confidence 999886 95542 237778877763 4443222111 1145667777788888888764
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 341 GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+ +.++.+++.+++.+.|+++
T Consensus 344 ~---l~~~~~~~G~~l~~~L~~l 363 (459)
T PRK06931 344 N---LAQNAAERGEWLKAQLAEL 363 (459)
T ss_pred C---HHHHHHHHHHHHHHHHHHH
Confidence 3 4566666666666666543
No 368
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=6.8e-12 Score=113.14 Aligned_cols=262 Identities=13% Similarity=0.093 Sum_probs=162.7
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CCCCC----CcE--EEeCCHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NASDS----GEI--VFTKNATEA 141 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~~~----~~v--~~t~g~t~a 141 (368)
+|-|..+-.+.-+.|.++-.+...... ..++-..+...+.++.+++++ |.+.+ +.+ +-|.|+|.|
T Consensus 35 vY~de~Gk~pvl~aV~~Ae~~l~~~~~--------~k~Yl~i~G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGA 106 (396)
T COG1448 35 VYKDEDGKTPVLRAVKKAEKRLLEQEK--------TKNYLPIEGLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGA 106 (396)
T ss_pred eeeCCCCCcchhHHHHHHHHHhhcccc--------ccccCCcCCcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchH
Confidence 344444445566666666554443321 111122344556666677664 54311 122 577899999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhccc---CceEEEEcc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR---KTKLVVIHH 216 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~~~v~~~~ 216 (368)
+.....-+. ...+...|++++|.++.+. .+.+..|.++...|.- ++..+|.+.+.+.|.+ +..++.-..
T Consensus 107 L~~~A~fl~--~~~~~~~vwis~PtW~NH~----~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~C 180 (396)
T COG1448 107 LRVAADFLA--RFFPDATVWISDPTWPNHK----AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGC 180 (396)
T ss_pred HHHHHHHHH--HhCCCceEEeCCCCcHhHH----HHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecC
Confidence 999998874 3667778999999777644 4445569999888864 3456899888887754 445666777
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCc-CCcccccCCC---------CCccEEEecCcCcCCCCc--ceEEE
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHMVVDVQG---------LDADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~~~~~~~---------~~~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+|||||.-.+ +++|.++.+++|.+.++|-||- ++.- ++-+. ...-+++.|+||.||..| +|.+.
T Consensus 181 cHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~ 259 (396)
T COG1448 181 CHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALS 259 (396)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeE
Confidence 8999999998 7788889999999999999964 3322 22211 123678889999999888 55543
Q ss_pred -Ecc--cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------HHHHhCHHHHHHHHHHH
Q 017640 282 -GKS--DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID------YLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 282 -~~~--~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~------~~~~~g~~~i~~~~~~l 352 (368)
+.+ +....+..... .. -|-...+|+..+..-...-|. .++. .+..+++|+.++
T Consensus 260 vva~~~~~a~~v~sqlk------~~-----------iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~-El~~Mr~Ri~~m 321 (396)
T COG1448 260 VVAEDAEEADRVLSQLK------AI-----------IRTNYSNPPAHGAAVVATILNNPELRAEWEQ-ELEEMRQRILEM 321 (396)
T ss_pred EEeCCHHHHHHHHHHHH------HH-----------HHhccCCCchhhHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHHH
Confidence 322 22222221110 00 011112444443333333222 1222 478999999999
Q ss_pred HHHHHHHHHhh
Q 017640 353 IICSIIVIQER 363 (368)
Q Consensus 353 ~~~l~~~l~~~ 363 (368)
+..+.+.|++.
T Consensus 322 R~~lv~~L~~~ 332 (396)
T COG1448 322 RQALVDALKAL 332 (396)
T ss_pred HHHHHHHHHhh
Confidence 99999999873
No 369
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.43 E-value=2.4e-11 Score=116.63 Aligned_cols=268 Identities=9% Similarity=-0.014 Sum_probs=163.2
Q ss_pred eEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
.-|+|.. ..|..+|.+.+++.+.+.++......+ . ..+...++.+.++++++..- +.+.|++++++|
T Consensus 45 ~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~--~----~~~~~~~la~~l~~~~~~~~-~~v~f~~sGseA 117 (427)
T TIGR00508 45 RRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGG--F----THKPAIELCQKLVKMTPNAL-DCVFLADSGSVA 117 (427)
T ss_pred CEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccc--c----CCHHHHHHHHHHHhhCCCCC-CEEEEeCCcHHH
Confidence 3466654 346789999999999988642111100 1 12233467777888775432 389999999999
Q ss_pred HHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHH-------cC---CEEEEEeCCCC-C-----CCCHHHH
Q 017640 142 INLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQK-------TG---ANLKFLNLNDD-E-----SPDLDKL 201 (368)
Q Consensus 142 ~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~-------~g---~~v~~v~~~~~-~-----~~d~~~l 201 (368)
++.+++...... ...+..|+..+..|++.......+... .+ ..+..++.... . .-|++++
T Consensus 118 ~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l 197 (427)
T TIGR00508 118 VEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPL 197 (427)
T ss_pred HHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHH
Confidence 999988642110 012457999999999865433322110 00 01112221100 0 0145667
Q ss_pred HHhcc---cCceEEEEccc-ccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecC
Q 017640 202 KEMLS---RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASS 268 (368)
Q Consensus 202 ~~~l~---~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~ 268 (368)
++.+. ++.++|+++.. +...|...+ +++|.++|++||+++|+||+|. +|.. ..+.....+|+++ +
T Consensus 198 ~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~--~ 275 (427)
T TIGR00508 198 AKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAGVVPDILC--V 275 (427)
T ss_pred HHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcCCCCCEEE--e
Confidence 77764 35688889986 666676554 8999999999999999999984 3221 1122234688887 5
Q ss_pred cCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 269 HKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 269 ~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+|.++.. .++.++.++++.+.+.....+... .......+..+.++..++++.+.+. .+.
T Consensus 276 gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~----------------~~~T~~g~p~~~aaa~a~l~~l~~~---~~~ 336 (427)
T TIGR00508 276 GKALTGGYMTLSATVTTDKVAQTISSGEAGCFM----------------HGPTFMGNPLACAVAEASLAILLEG---EWQ 336 (427)
T ss_pred chhhhcCcccceEEEEcHHHHHHHhcCCCCccc----------------cCCCCCcCHHHHHHHHHHHHHHHhC---CHH
Confidence 7966421 268888888887766532110000 0001134667777788888888764 346
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++.+++.+++.+.|+++
T Consensus 337 ~~~~~~~~~l~~~L~~l 353 (427)
T TIGR00508 337 KQVSAIENQLKRELSPL 353 (427)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 78888888888877664
No 370
>PRK06149 hypothetical protein; Provisional
Probab=99.43 E-value=4.5e-11 Score=125.51 Aligned_cols=261 Identities=13% Similarity=0.084 Sum_probs=164.9
Q ss_pred CeEEeccCC----CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 67 KLVYLDNAA----TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 67 ~~i~l~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+.-|+|..+ .|+.+|.|.+++.+.+.....+. .. ..+...++.++|++++.... +.++|++|+++|+
T Consensus 584 G~~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~l~~~~---~~-----~~~~~~elae~L~~~~p~~~-~~v~f~~SGsEA~ 654 (972)
T PRK06149 584 GRSYLDMVNNVTVLGHGHPRLAAAAARQWSLLNTNS---RF-----HYAAVAEFSERLAALAPDGL-DTVFLVNSGSEAN 654 (972)
T ss_pred CCEEEECCCCccccCCCCHHHHHHHHHHHHhccccc---cc-----cCHHHHHHHHHHHHhCCCCc-CEEEEeCCchHHH
Confidence 344666532 45679999999999887653221 11 12445578888988884332 3899999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----cC---C---EEEEEeCCCC----CC-CC-----HHHHH
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----TG---A---NLKFLNLNDD----ES-PD-----LDKLK 202 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----~g---~---~v~~v~~~~~----~~-~d-----~~~l~ 202 (368)
+.+++..+. ...+..|+.....||+.......+... .+ . .+..++.... +. .+ .++++
T Consensus 655 e~AlklAr~--~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~ 732 (972)
T PRK06149 655 DLAIRLAWA--ASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV 732 (972)
T ss_pred HHHHHHHHH--hcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence 999985421 234567888888888654322111100 00 0 1222322111 10 11 23444
Q ss_pred Hhcc------cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCC-cCCccc-----ccCCCCCccEEEe
Q 017640 203 EMLS------RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ-SVPHMV-----VDVQGLDADFLVA 266 (368)
Q Consensus 203 ~~l~------~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~-~~~~~~-----~~~~~~~~d~~~~ 266 (368)
+.++ .++.+|+++......|.+.| +++|.++|++||+++|+||++ ++|..- .+.....+|+++.
T Consensus 733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~ 812 (972)
T PRK06149 733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITM 812 (972)
T ss_pred HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEe
Confidence 3332 35789999999998998888 999999999999999999998 455432 1112346898865
Q ss_pred cCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 267 SSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 267 s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
+|.+|. ..+|.+++++++.+.+.+. +. .+...+.|..+.++..+.++.+++. .+
T Consensus 813 --gK~lg~G~Pl~av~~~~~i~~~~~~~--~~------------------~~sT~~gnP~~~aaala~L~~i~~e---~l 867 (972)
T PRK06149 813 --AKGMGNGHPLGAVITRREIAEALEAE--GY------------------FFSSTGGSPVSCRIGMAVLDVLREE---KL 867 (972)
T ss_pred --cccccCCeeeEEEEEcHHHHhhhccC--Cc------------------ccCCCCCCHHHHHHHHHHHHHHHhc---CH
Confidence 596653 2389999999987766531 10 0111245666777777888888764 45
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 017640 346 HAYEVKWIICSIIVIQER 363 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~ 363 (368)
.++.+++.+++.+.|+++
T Consensus 868 ~~~~~~~G~~l~~~L~~l 885 (972)
T PRK06149 868 QENARRVGDHLKARLEAL 885 (972)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 667777777777777654
No 371
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.41 E-value=7.9e-11 Score=113.29 Aligned_cols=257 Identities=9% Similarity=0.015 Sum_probs=148.3
Q ss_pred CCCCcHHHH--HHHHHHHHHhhc-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCC
Q 017640 76 TSQKPIAVL--KALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS 152 (368)
Q Consensus 76 ~~~~~~~v~--~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~ 152 (368)
.|+..|.+. +++++.+..... .+.. .... .+...++.+.|+++...+.-+.+.|++++++|++.+++..+..
T Consensus 52 lGh~~p~v~~~~ai~~q~~~~~~~~~~~-~~~~----~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~ 126 (431)
T TIGR03251 52 LGMNHPALVDDLAFRARLGAAAVNKPSN-SDVY----TVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDW 126 (431)
T ss_pred CCCCChhhhHHHHHHHHHHHhhhccccc-CCCC----CHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHH
Confidence 567788998 899888876421 1111 0111 2233355566666653222248899999999999999876321
Q ss_pred C-----C-C----CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE--------E--e-----CCCCC-C-------CCHH
Q 017640 153 N-----L-K----SGDEVILTVAEHHSAIVPWQLVAQKTGANLKF--------L--N-----LNDDE-S-------PDLD 199 (368)
Q Consensus 153 ~-----~-~----~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~--------v--~-----~~~~~-~-------~d~~ 199 (368)
. . . .+.+|+....+||+...............-.+ + | .+.+. . -+++
T Consensus 127 t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~ 206 (431)
T TIGR03251 127 KSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALR 206 (431)
T ss_pred hhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHH
Confidence 0 0 0 14689999999998765433332110000000 1 1 00000 0 1244
Q ss_pred HHHHhcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEec
Q 017640 200 KLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVAS 267 (368)
Q Consensus 200 ~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s 267 (368)
++++.+. .++.+|+++..+...|.+.| +++|.++|++||+++|+||+++ +|.. ..+.....+|+++.+
T Consensus 207 ~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~g 286 (431)
T TIGR03251 207 QARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFG 286 (431)
T ss_pred HHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEEec
Confidence 4555553 47899999999999998875 8999999999999999999988 5443 222334469999864
Q ss_pred CcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH-HHHH
Q 017640 268 SHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM-QKIH 346 (368)
Q Consensus 268 ~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~-~~i~ 346 (368)
|.+ +.+|++.. +++.+...... ++.. .....-+.+..+.++..++++.+.+.++ ++++
T Consensus 287 --K~~--~~~g~~~~-~~i~~~~~~~~-~~~~---------------~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 345 (431)
T TIGR03251 287 --KKT--QVCGIMAG-RRVDEVADNVF-AVPS---------------RLNSTWGGNLVDMVRATRILEIIEEERLVDNAR 345 (431)
T ss_pred --ccC--ccceEEec-chHHHhhhhcc-cCcc---------------ccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 754 33455543 33211111000 0000 0011114567788888899998887653 3555
Q ss_pred HHHHHHHHHHHH
Q 017640 347 AYEVKWIICSII 358 (368)
Q Consensus 347 ~~~~~l~~~l~~ 358 (368)
+....+.+.+.+
T Consensus 346 ~~g~~l~~~L~~ 357 (431)
T TIGR03251 346 VQGAHLLARLHE 357 (431)
T ss_pred HHHHHHHHHHHH
Confidence 555555555544
No 372
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=4.2e-11 Score=108.59 Aligned_cols=215 Identities=17% Similarity=0.125 Sum_probs=146.8
Q ss_pred eEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
.=|+|.. ..++..|++.+++.+.+..+... .+..+....-++.+.+.+.++....+.|.|.+++|+|
T Consensus 56 ~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs-------~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeA 128 (433)
T KOG1401|consen 56 KEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHS-------SNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEA 128 (433)
T ss_pred ceeeeeccceeccccCCCCHHHHHHHHHHHhhheec-------cCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHH
Confidence 3466654 35677899999998888875322 2222222244688888888877766799999999999
Q ss_pred HHHHHHHccCCCCC--C--CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC---CC----CCCCHHHHHHhcccC--
Q 017640 142 INLVAYSWGLSNLK--S--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN---DD----ESPDLDKLKEMLSRK-- 208 (368)
Q Consensus 142 ~~~~~~~~~~~~~~--~--gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~---~~----~~~d~~~l~~~l~~~-- 208 (368)
++.++...++-... + ...++....+||+-...+...+ +......+.+ ++ ..-|+.++++.++.+
T Consensus 129 ne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~---~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 129 NETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVT---GNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred HHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhh---cccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 99999875321111 1 1248888999998766555544 2222222221 22 112788999988764
Q ss_pred -ceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcccc----cCCCCCccEEEecCcCcCC-CCcc
Q 017640 209 -TKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMVV----DVQGLDADFLVASSHKMCG-PTGI 277 (368)
Q Consensus 209 -~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~~----~~~~~~~d~~~~s~~K~~g-~~G~ 277 (368)
+.+|+++..+...|.+.. +..|.++|+++|+++|.||++. ++.... ..-...+|+.+.. |.+| +-.+
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~a--K~L~gGlPi 283 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVA--KPLGGGLPI 283 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCcceeeh--hhccCCcee
Confidence 489999999988887765 7899999999999999999987 233311 1112358888776 9554 3349
Q ss_pred eEEEEcccccccCCCcc
Q 017640 278 GFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 278 G~l~~~~~li~~l~~~~ 294 (368)
|...+++++.+.+.|--
T Consensus 284 gA~~v~~kV~~~i~~~~ 300 (433)
T KOG1401|consen 284 GATGVRDKVAEMISPGD 300 (433)
T ss_pred EEEeehHHHHhhcCCCC
Confidence 99999999988877543
No 373
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.41 E-value=7.9e-11 Score=113.26 Aligned_cols=263 Identities=11% Similarity=0.085 Sum_probs=151.7
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHH--HHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNY--YEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g 137 (368)
++..|+|..+ .|+.++.+.+++++. ...+. +.. . .......+..+.+.+.+++++..+- +.|+|++|
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~-~~~--~-~~~~~~~~la~~l~~~l~~~~p~~~-~~v~f~~S 130 (464)
T TIGR00699 56 DGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLI-NRP--A-LGNFPSKDWAKILKEGILKVAPKGQ-DQVWTGMS 130 (464)
T ss_pred CCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhc-ccc--c-CCcHHHHHHHHHHHHhHHhhCCCCc-CEEEEeCC
Confidence 4556888754 467899999999874 22221 111 1 1111122333333333445554222 38999999
Q ss_pred HHHHHHHHHHHccCCC------C----------------CC---CCEEEEcCCCCcccHHHHHHHHHHc-----C---CE
Q 017640 138 ATEAINLVAYSWGLSN------L----------------KS---GDEVILTVAEHHSAIVPWQLVAQKT-----G---AN 184 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~------~----------------~~---gd~vl~~~~~~~s~~~~~~~~~~~~-----g---~~ 184 (368)
+++|++.+++...... . .+ +..|+....+||+.......+.... + ..
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 9999999998752110 0 01 2279999999998765444332110 1 01
Q ss_pred EEEEeCCC-C---C----------CCCHHHHHHhcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEE
Q 017640 185 LKFLNLND-D---E----------SPDLDKLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 185 v~~v~~~~-~---~----------~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~ 243 (368)
+..+|... . . .-+++.+++.+. .++.+|+++......|.+.| +++|.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 11222210 0 0 013556777774 35799999999999999987 99999999999999999
Q ss_pred ecCCc-CCcc----cccCCCC--CccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCC
Q 017640 244 DACQS-VPHM----VVDVQGL--DADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSR 316 (368)
Q Consensus 244 D~a~~-~~~~----~~~~~~~--~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (368)
||++. +|.. ..+.... .+|+++.+ |.+|..| +++.+ +.+....+...
T Consensus 291 DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~g--K~lg~gG--~~~~~-~~~~~~~~~~~--------------------- 344 (464)
T TIGR00699 291 DEVQTGVGATGKFWAHEHWNLDDPPDMVTFS--KKFQTAG--YFFHD-PAFRPNKPYRQ--------------------- 344 (464)
T ss_pred eeeeeCCCCCcchhHHHhcCCCCCCCEEEeh--hhhccCC--ccccc-hhccCCCCccc---------------------
Confidence 99985 3321 1111122 38997775 9775433 33332 22111111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 317 FEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 317 ~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
+.....|..+.++..++++.+.+. .+.+++.++.+++.+.|++
T Consensus 345 ~~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 387 (464)
T TIGR00699 345 FNTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDYLYTGLED 387 (464)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 112246666777777888888764 3455565555566555544
No 374
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.40 E-value=4.9e-11 Score=114.71 Aligned_cols=257 Identities=12% Similarity=0.037 Sum_probs=149.7
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|.. ..|+..|.+.+++.+.++..... . + ..+...++.+.|++.+... +.+.|+++++
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~---~-~-----~~~~~~~la~~l~~~~p~~--~~v~f~~sGs 114 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNF---T-R-----PSAIELDAAESFLELIDGA--DMVKFCKNGS 114 (431)
T ss_pred CCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCC---C-C-----CCHHHHHHHHHHHHhCCcc--ceEEEecCHH
Confidence 344577763 35678999999999998864211 0 0 1222235677788877422 3899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEc-CCCCcccHHHHHHHH-HHcCC------EEEEEeCCCCCCCCHHHHHHhcc---cC
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILT-VAEHHSAIVPWQLVA-QKTGA------NLKFLNLNDDESPDLDKLKEMLS---RK 208 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~-~~~~~s~~~~~~~~~-~~~g~------~v~~v~~~~~~~~d~~~l~~~l~---~~ 208 (368)
+|++.+++..+. ...+..|+.. ...|++....+.... ...+. .+..++.+ |++++++.++ .+
T Consensus 115 eA~e~AlklAr~--~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~ 187 (431)
T PRK06209 115 DATSAAVRLARA--YTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFRYN-----DIASLEALFEDHPGR 187 (431)
T ss_pred HHHHHHHHHHHH--HhCCCeEEEeccCccccccccccccCCCCCCCChhHhccccccCCC-----CHHHHHHHHHhCCCC
Confidence 999999996532 2233455554 334433111110000 00010 01122222 7899998885 25
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc--cC---CCCCccEEEecCcCcCCC-CcceEEEE
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV--DV---QGLDADFLVASSHKMCGP-TGIGFLFG 282 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~--~~---~~~~~d~~~~s~~K~~g~-~G~G~l~~ 282 (368)
+.+|+++......+-.-.+++|.++|++||+++|+||++. |.... -. ....+|+++ ++|.+|. ..+|.+++
T Consensus 188 ~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi~t--~gK~lggG~p~~av~~ 264 (431)
T PRK06209 188 IACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDLSC--FGKALGNGFAVSALAG 264 (431)
T ss_pred EEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCcceee--ehhhhcCCcccEEEEE
Confidence 6788888764432222228999999999999999999984 33210 01 123578755 4697653 22788889
Q ss_pred ccccccc--CCCcccCCcceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 017640 283 KSDLLSA--MPPFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 283 ~~~li~~--l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 359 (368)
++++++. +.....+.. ..+ ..-+++....+++.++++.+++.+ +.+++.++.+++.+.
T Consensus 265 ~~~i~~~~~~~~~~~~~~----------------~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~ 325 (431)
T PRK06209 265 KREYMELGGLEHTDRERV----------------FLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAG 325 (431)
T ss_pred HHHHHhhhcccccCCCCc----------------eeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHH
Confidence 9888764 211100000 000 012466778888889999998754 455555555665555
Q ss_pred HHh
Q 017640 360 IQE 362 (368)
Q Consensus 360 l~~ 362 (368)
|++
T Consensus 326 L~~ 328 (431)
T PRK06209 326 VNE 328 (431)
T ss_pred HHH
Confidence 543
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.36 E-value=1.7e-11 Score=114.79 Aligned_cols=270 Identities=11% Similarity=0.077 Sum_probs=170.4
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|||..+ .|...+.+.+++.+.+..+.-... .+....+ ..++.++|+++.....=+.|+|++|++
T Consensus 42 ~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~-----~~~t~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGS 115 (449)
T COG0161 42 DGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMF-----GGFTHEP-AIELAEKLAELAPEGGLDHVFFTDSGS 115 (449)
T ss_pred CCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhh-----cccCCch-HHHHHHHHHHhCCCCCccEEEEeCCch
Confidence 3445777654 567899999999999987633211 1111123 557899999999843224999999999
Q ss_pred HHHHHHHHHccCCC---CCC-CCEEEEcCCCCcccHHHHHHHHHH-------cC---CEEEEEeCCC--------CCC--
Q 017640 140 EAINLVAYSWGLSN---LKS-GDEVILTVAEHHSAIVPWQLVAQK-------TG---ANLKFLNLND--------DES-- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---~~~-gd~vl~~~~~~~s~~~~~~~~~~~-------~g---~~v~~v~~~~--------~~~-- 195 (368)
+|++.+++....+. -+| +.+++.-...||+......+++.. ++ ..+..++... ++.
T Consensus 116 eAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~ 195 (449)
T COG0161 116 EAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEE 195 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHH
Confidence 99999988742111 123 334888888888765443333210 00 1122222221 011
Q ss_pred --CCHHHHHHhccc----CceEEEEcccccc-cccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCC
Q 017640 196 --PDLDKLKEMLSR----KTKLVVIHHISNM-LASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGL 259 (368)
Q Consensus 196 --~d~~~l~~~l~~----~~~~v~~~~~~n~-tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~ 259 (368)
-..++||+.|.. ++.+++++....- .|++.| ++++.++|++||+++|.||+-. +|.. ..+-...
T Consensus 196 ~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi 275 (449)
T COG0161 196 FAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGI 275 (449)
T ss_pred HHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC
Confidence 125567776643 5688888888777 888877 8999999999999999999954 4433 1122234
Q ss_pred CccEEEecCcCcC--CCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 260 DADFLVASSHKMC--GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 260 ~~d~~~~s~~K~~--g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
.+|+++.+ |.+ |.-.+|.+++++++.+.+..-..+.+. . .+ ..+-|..+-+++.+.|+.+
T Consensus 276 ~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~------H---------G~-TYsghPlacAaAla~L~i~ 337 (449)
T COG0161 276 VPDILCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFM------H---------GH-TYSGNPLACAAALANLDIL 337 (449)
T ss_pred CCCeeeec--ccccccchhhHhHhhhHHHHHHHhcccCCeec------c---------CC-ccccCHHHHHHHHHHHHHH
Confidence 69999988 844 333388899999887765532111111 0 11 1255555555566666666
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 338 STIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 338 ~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++ +.+.++..++..++.+.|++
T Consensus 338 e~---e~l~~~~~~~~~~l~~~L~~ 359 (449)
T COG0161 338 EE---EDLLERVAEIGAYLQAGLQA 359 (449)
T ss_pred Hh---cCHHHHHHHHHHHHHHHHHH
Confidence 66 45667777888888888876
No 376
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.35 E-value=1.7e-10 Score=111.25 Aligned_cols=268 Identities=9% Similarity=-0.003 Sum_probs=155.6
Q ss_pred CeEEeccC------CCCCCcHHHHH--HHHHHHHHhhc-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC
Q 017640 67 KLVYLDNA------ATSQKPIAVLK--ALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKN 137 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~~--a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g 137 (368)
+.-|+|.. ..|+..|.+.+ ++++.+..... .+... .. ..+...++.+.|+++.+.+..+.|.|++|
T Consensus 44 G~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~-~~----~~~~~~~la~~l~~~~~p~~~~~v~f~~S 118 (443)
T PRK08297 44 GRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNS-DV----YTVEMARFVDTFARVLGDPELPHLFFVDG 118 (443)
T ss_pred CCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccC-Cc----CCHHHHHHHHHHHhhcCCCCCCEEEEeCc
Confidence 44577753 35678999999 99988876421 11100 01 12334457777777763222248999999
Q ss_pred HHHHHHHHHHHccCCC-------C---CCCCEEEEcCCCCcccHHHHHHHHHHcCCE-----E---EEEeCC--C----C
Q 017640 138 ATEAINLVAYSWGLSN-------L---KSGDEVILTVAEHHSAIVPWQLVAQKTGAN-----L---KFLNLN--D----D 193 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~-------~---~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~-----v---~~v~~~--~----~ 193 (368)
+++|++.+++...... - ..+.+|+....+||+............... . ..++.. . .
T Consensus 119 GsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (443)
T PRK08297 119 GALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPG 198 (443)
T ss_pred hHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcc
Confidence 9999999998763210 0 013679999999998765433331100000 0 001100 0 0
Q ss_pred CC---------CCHHHHHHhcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc---
Q 017640 194 ES---------PDLDKLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--- 253 (368)
Q Consensus 194 ~~---------~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--- 253 (368)
.. -+++.+++.+. .++.+|+++......|.+.| +++|.++|++||+++|+||++. +|...
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~ 278 (443)
T PRK08297 199 EDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW 278 (443)
T ss_pred cccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH
Confidence 00 02345566664 46799999999998898765 8999999999999999999985 54431
Q ss_pred -ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 254 -VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 254 -~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
.+.....+|+++. +|.+++ .|++ +.+++.+.....+.+.. ..+...+.|..+.++..+
T Consensus 279 a~~~~gv~PDiv~~--gK~l~~--~a~l-~~~~i~~~~~~~~~~~~----------------~~~~T~~gnpl~~aaa~a 337 (443)
T PRK08297 279 AYQQLGVRPDIVAF--GKKTQV--CGIM-AGRRVDEVEDNVFAVSS----------------RINSTWGGNLVDMVRARR 337 (443)
T ss_pred HHHhcCCCCCEEEe--cccccc--ccee-cchHHHHhhhhhccCcc----------------ccCCCCCccHHHHHHHHH
Confidence 1122346999975 597642 2444 33332111110000000 011111356667777777
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 333 AIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 333 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+.+. .+.+++.++.+++.+.|+++
T Consensus 338 ~L~~l~~~---~l~~~~~~~g~~l~~~L~~l 365 (443)
T PRK08297 338 ILEVIEED---GLVENAARQGEYLLARLEEL 365 (443)
T ss_pred HHHHHHhc---CHHHHHHHHHHHHHHHHHHH
Confidence 78877763 45566667777776666543
No 377
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.33 E-value=4.7e-11 Score=107.46 Aligned_cols=261 Identities=19% Similarity=0.191 Sum_probs=171.6
Q ss_pred CCCeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
|.++++|+.+.+- ...+.+.+.....+..+....= | ...-++..+..-++++.+|+++|.+. .|+...|-+ ++
T Consensus 93 G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsC-G-PrGFYGt~DvHldlE~~iakF~G~E~--aivYs~gF~-ti 167 (467)
T KOG1358|consen 93 GKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSC-G-PRGFYGTIDVHLDLEKRIAKFMGTED--AIVYSYGFS-TI 167 (467)
T ss_pred CceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCc-C-CCcccccceeecccHHHHHHhhCCcc--eeeeccccc-hh
Confidence 4556666665544 4577888888888887632211 0 00112334555689999999999983 677777764 78
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC-------------c
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK-------------T 209 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~-------------~ 209 (368)
..++.++ .++||.+.+.+..+..+ +...+...-+++++..+ |.++|++.+.++ .
T Consensus 168 ~S~ipaf----sKrGDIi~~de~~nfaI----q~GlqlSRS~i~~Fkhn-----dm~~lerll~E~~~~~~K~~k~~~~R 234 (467)
T KOG1358|consen 168 ESAIPAF----SKRGDIIFVDEAVNFAI----QKGLQLSRSTISYFKHN-----DMEDLERLLPEQEDEDQKNPKKALTR 234 (467)
T ss_pred hhcchhh----hccCcEEEEehhhhHHH----HHHHhhhhheeEEecCC-----CHHHHHHhccCcchhhhhccccccce
Confidence 8888888 89999999999855554 44334446678888877 888887776432 2
Q ss_pred eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEE
Q 017640 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFL 280 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l 280 (368)
+.|++....-++|.+.|+.+|.++..+|...+|+|+..++|... ...+..+.|++++|+.-.++..| |+.
T Consensus 235 rfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G-gFc 313 (467)
T KOG1358|consen 235 RFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG-GFC 313 (467)
T ss_pred EEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC-cee
Confidence 67889999999999999999999999999999999999876541 12233358999999888776654 777
Q ss_pred EEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 281 FGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 281 ~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
.++.-.++. +.. .| ....|....|++.. .++..++...++. +.+.+.+.....-+...+
T Consensus 314 ~G~~~i~~h-QrL-Sg----------------~~Y~fSAslPp~la-~aa~~ai~i~~~~--p~~~~~L~~k~~~~H~~l 372 (467)
T KOG1358|consen 314 AGKSFIADH-QRL-SG----------------SGYCFSASLPPYLA-GAAIKAILIEEWN--PEIVQPLRAKVAKFHAAL 372 (467)
T ss_pred ecceeeEee-eec-cc----------------cceeeeccCchhhh-hhHHHHHHHHhhC--cchhhhhhccccccchhh
Confidence 764433322 211 11 11234333444443 3445556655553 224444555555555555
Q ss_pred HhhcC
Q 017640 361 QERHN 365 (368)
Q Consensus 361 ~~~~g 365 (368)
....+
T Consensus 373 ~~~s~ 377 (467)
T KOG1358|consen 373 SSNSG 377 (467)
T ss_pred hcCCc
Confidence 54433
No 378
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.32 E-value=1.2e-10 Score=108.68 Aligned_cols=255 Identities=15% Similarity=0.094 Sum_probs=159.4
Q ss_pred EEecc--CCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 69 VYLDN--AATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 69 i~l~~--~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
+++|- .+.+ .+++.+.+++..--+.+ +..+...++++.++++||.+ .+++|..++.+...+
T Consensus 42 V~IDLrSDTgT~apS~~m~aAM~~GDD~Y-------------~gdpSv~~Lee~vael~G~E---~alpthqGRgaE~Il 105 (467)
T TIGR02617 42 VFIDLLTDSGTGAVTQSMQAAMMRGDEAY-------------SGSRSYYALAESVKNIFGYQ---YTIPTHQGRGAEQIY 105 (467)
T ss_pred eEEECccCCCCCCCCHHHHHHHHcCCccc-------------ccCchHHHHHHHHHHHhCCc---eEEECCCCchHHHHH
Confidence 45554 4444 58888888887511111 11334458999999999997 568898888888888
Q ss_pred HHHccCCCCC-CCCEEEEcCC----CCcccHHHHHHHHHHcCCEEEEEeCC----------CCCCCCHHHHHHhccc---
Q 017640 146 AYSWGLSNLK-SGDEVILTVA----EHHSAIVPWQLVAQKTGANLKFLNLN----------DDESPDLDKLKEMLSR--- 207 (368)
Q Consensus 146 ~~~~~~~~~~-~gd~vl~~~~----~~~s~~~~~~~~~~~~g~~v~~v~~~----------~~~~~d~~~l~~~l~~--- 207 (368)
...+ ++ +|+++.+... .|...+......+...|+.++.++.+ .+|.+|++.|+++|.+
T Consensus 106 ~~~~----~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~ 181 (467)
T TIGR02617 106 IPVL----IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP 181 (467)
T ss_pred HHhh----cccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC
Confidence 8877 66 7888886664 45555544455566779888776432 3589999999999974
Q ss_pred -CceEEEEcccccc-cccccC---HHHHHHHHHhcCCEEEEecCCcC-----------CcccccCC------CCCccEEE
Q 017640 208 -KTKLVVIHHISNM-LASILP---IEEIVHWSHDVGAKVLVDACQSV-----------PHMVVDVQ------GLDADFLV 265 (368)
Q Consensus 208 -~~~~v~~~~~~n~-tG~~~~---l~~i~~l~~~~g~~li~D~a~~~-----------~~~~~~~~------~~~~d~~~ 265 (368)
+...+...-.+|. .|+.+| ++++.++|++||+.++.|++--+ +....++. ....|.++
T Consensus 182 ~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt 261 (467)
T TIGR02617 182 NNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLA 261 (467)
T ss_pred CCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEE
Confidence 2333332222333 577888 67899999999999999997321 12212211 13589999
Q ss_pred ecCcCcCCCCcceEEEEccc----ccccCCCcccCCcceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHh
Q 017640 266 ASSHKMCGPTGIGFLFGKSD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 266 ~s~~K~~g~~G~G~l~~~~~----li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
.|++|.+|.+=.|++..+++ +.+.++....- ..+| ..|..+.--+-+++.+|+...+
T Consensus 262 ~slsKglgApvGg~Lag~d~~~~~l~~~~~~~~i~-----------------~EGf~tYGGlagrd~ea~a~Gl~e~~~- 323 (467)
T TIGR02617 262 MSAKKDAMVPMGGLLCFKDDSFFDVYTECRTLCVV-----------------QEGFPTYGGLEGGAMERLAVGLYDGMN- 323 (467)
T ss_pred EEcCCCCCCcccceEEecchhHHHHHHHHHhhccc-----------------ccCCcCcCchhHHHHHHHHhhhhhccc-
Confidence 99999777553488888776 22333322210 0122 1344444455556655554322
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 341 GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.+ .+.-...+|+.+.|.+.
T Consensus 324 -~~yl-~~ri~qv~yl~~~L~~~ 344 (467)
T TIGR02617 324 -LDWL-AYRINQVQYLVNGLEEI 344 (467)
T ss_pred -HHHH-HHHHHHHHHHHHHHHhC
Confidence 3344 44445567777777654
No 379
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.27 E-value=1.2e-09 Score=111.36 Aligned_cols=268 Identities=10% Similarity=0.011 Sum_probs=162.7
Q ss_pred EEeccCC------CC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 69 VYLDNAA------TS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 69 i~l~~~~------~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
-|||..+ .+ ...+.+.+++.+++.++..... .+ ...+...++.++|++..+.+.-+.|+|++|+++|
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv~~-----~~-~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeA 439 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHVMF-----PE-NVHEPALRAAELLLGGPGKGWASRVFFSDNGSTA 439 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcccc-----Cc-cCCHHHHHHHHHHHhccCCCCCCEEEECCchHHH
Confidence 5777654 34 4689999999999887532211 00 0123334677777775442212389999999999
Q ss_pred HHHHHHHccC-CCC--C--------------CCCEEEEcCCCCcccHHHHHHHHHHc---C---CE-----EEEEeCC--
Q 017640 142 INLVAYSWGL-SNL--K--------------SGDEVILTVAEHHSAIVPWQLVAQKT---G---AN-----LKFLNLN-- 191 (368)
Q Consensus 142 ~~~~~~~~~~-~~~--~--------------~gd~vl~~~~~~~s~~~~~~~~~~~~---g---~~-----v~~v~~~-- 191 (368)
++.+++...+ ... . .+.+|+.....||+.......+.... + .. ...++..
T Consensus 440 vE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~ 519 (817)
T PLN02974 440 IEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519 (817)
T ss_pred HHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCcc
Confidence 9999886521 110 1 24579999999998765544432100 0 00 0111100
Q ss_pred ------------CCC-----------C-----CC------------HHHHHHhcc--------cCceEEEEccc-ccccc
Q 017640 192 ------------DDE-----------S-----PD------------LDKLKEMLS--------RKTKLVVIHHI-SNMLA 222 (368)
Q Consensus 192 ------------~~~-----------~-----~d------------~~~l~~~l~--------~~~~~v~~~~~-~n~tG 222 (368)
..+ . .| .+.+++.|. +++.+|+++.. +.-.|
T Consensus 520 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGG 599 (817)
T PLN02974 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGG 599 (817)
T ss_pred ccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCC
Confidence 000 0 00 244666653 25688899885 67778
Q ss_pred cccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC--cceEEEEcccccccCC
Q 017640 223 SILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT--GIGFLFGKSDLLSAMP 291 (368)
Q Consensus 223 ~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~ 291 (368)
.+.| ++.|.++|++||+++|+||++. +|.. ..+.....+|+++.+ |.++.. .+|.+++++++.+.+.
T Consensus 600 mi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~f~ 677 (817)
T PLN02974 600 MLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVPLAATLATEEVFEAFR 677 (817)
T ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCccEEEEEcHHHHHhhc
Confidence 8876 8999999999999999999987 4332 122233469999988 965432 4899999999877653
Q ss_pred C-cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Q 017640 292 P-FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 292 ~-~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~~l 360 (368)
. ...+.. ..-...+.+..+.+++.++|+.+++.+ ...+.++..++..++.+.+
T Consensus 678 ~~~~~~~~----------------~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l 732 (817)
T PLN02974 678 GPSKLDAL----------------LHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEEL 732 (817)
T ss_pred cccccCCc----------------ccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 1 100000 000122677777888888898888753 2355566666666655555
No 380
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=8.1e-10 Score=98.74 Aligned_cols=272 Identities=17% Similarity=0.156 Sum_probs=174.6
Q ss_pred CCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHH-HHHHHHHHHHHcCCCCCC-cE-EEeCCHHHHHHHHHHHccC
Q 017640 77 SQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDE-YELARKKVAAFINASDSG-EI-VFTKNATEAINLVAYSWGL 151 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~r~~la~~~~~~~~~-~v-~~t~g~t~a~~~~~~~~~~ 151 (368)
...+..|.+++...+..-+ +.|. ..++.|..+.+. ..-.+++..+.|+++++. .| |-.-+++-|+..+..++
T Consensus 50 NFts~aVmeAlGS~ltNKYSEGyPG-~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal-- 126 (477)
T KOG2467|consen 50 NFTSRAVMEALGSCLTNKYSEGYPG-ARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL-- 126 (477)
T ss_pred cchHHHHHHHHhHHhhcccccCCCc-ccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh--
Confidence 3567899999998888632 2332 233444444444 444788889999998653 33 22245667999999988
Q ss_pred CCCCCCCEEEEcC---CCCcccHHHHHHHHHHcCCEEEE-----EeCC-CCCCCCHHHHHHhcc-cCceEEEEccccccc
Q 017640 152 SNLKSGDEVILTV---AEHHSAIVPWQLVAQKTGANLKF-----LNLN-DDESPDLDKLKEMLS-RKTKLVVIHHISNML 221 (368)
Q Consensus 152 ~~~~~gd~vl~~~---~~~~s~~~~~~~~~~~~g~~v~~-----v~~~-~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~t 221 (368)
++|+++|.-.+ ..|-+.- +..-.+...+.-++ ..++ ..|.||-+.||+.-. -++++|+.-....+
T Consensus 127 --l~Ph~RiMGLDLP~GGHLsHG--y~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY~- 201 (477)
T KOG2467|consen 127 --LKPHERIMGLDLPSGGHLSHG--YQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAYS- 201 (477)
T ss_pred --cCCCCeeeeccCCCCCccccc--cccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccch-
Confidence 99999988544 4444432 11111111222222 2233 348999999987654 37887775544333
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcccc---cCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcccCC
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~---~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~ 297 (368)
..++.+.+.++|.+.|++++.|.+|-.|-+.- ...-..+|+++.+.||. -||.| |+++.|+.+.. ..+.. +
T Consensus 202 -R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~-~~~k~--g 276 (477)
T KOG2467|consen 202 -RLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKS-IKPKQ--G 276 (477)
T ss_pred -hhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccceeeccccccccCCcc-eeEEEeccCCc-CCCCC--C
Confidence 56778999999999999999999997554311 11122599999999994 57775 88888876532 22111 1
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..+.+...+...+ .-.--..|.|.-..+.+++.||..-.........+++.+++..+.++|.++
T Consensus 277 ~~i~ydlE~kINf--aVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~ 340 (477)
T KOG2467|consen 277 KEILYDLEDKINF--AVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR 340 (477)
T ss_pred Ccceechhhhhhh--hccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1111111111110 111123677888899999999998888778888899999999999998876
No 381
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=99.20 E-value=2.4e-09 Score=92.62 Aligned_cols=277 Identities=16% Similarity=0.167 Sum_probs=188.4
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCC--CcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeC-CHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHR--GIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK-NATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~-g~t~a~ 142 (368)
.++++|..+ +..+|.+|+..+++-+-.+++..-. -....+..+...+++.+..+.++++.++...|+|.. |+|.-.
T Consensus 6 ~~vvnFaaG-PAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 6 ERVVNFAAG-PAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQF 84 (370)
T ss_pred cceeecCCC-cccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccc
Confidence 455666543 3467888888877777665443210 122334557889999999999999999888888774 445444
Q ss_pred HHHHHHccCCCCCCC---CEEEEcCCCCcccHHHHHHHHHHcCCE-EEEEeCCCC---CCCCHHHHHHhcccCceEEEEc
Q 017640 143 NLVAYSWGLSNLKSG---DEVILTVAEHHSAIVPWQLVAQKTGAN-LKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 143 ~~~~~~~~~~~~~~g---d~vl~~~~~~~s~~~~~~~~~~~~g~~-v~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
..+..-+ ..++.| |-|+..+. ...++..+ +++|.. .+..+..+- -.+|.+.++ ++++.+.|.+|
T Consensus 85 aAv~lNL--~glK~g~~AdYiVTGsW----S~KA~~EA-kk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvyyC 155 (370)
T KOG2790|consen 85 AAVPLNL--IGLKHGRCADYVVTGSW----SAKAAEEA-KKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVYYC 155 (370)
T ss_pred cccchhh--hccccCCccceEEeccc----cHHHHHHH-HhhCCceEEeccccccccCcCCChhhcc--cCCCccEEEEe
Confidence 3333222 123444 56777666 44456665 455543 333333211 123555554 34566789999
Q ss_pred ccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCccc
Q 017640 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~ 295 (368)
...+.-|+-++.-. +-.-+|..++.|...-+-..|+|+.+ .++++...+|..|+.|+.++++|++++....+..+
T Consensus 156 aNETVHGVEf~~~P---~~~~~~~vlVaDmSSnflSrpvDvsk--~gvi~aGAQKN~G~aG~Tvvivr~dllg~~~~~tP 230 (370)
T KOG2790|consen 156 ANETVHGVEFDFIP---VNDPKGAVLVADMSSNFLSRPVDVSK--FGVIFAGAQKNVGPAGVTVVIVRKDLLGNALDITP 230 (370)
T ss_pred cCceeeceecCCCC---CCCCCCceEEEecccchhcCCccchh--cceEEeccccccCccccEEEEEehhhhcccccCCc
Confidence 99888898877332 22357899999999888888888877 56888999999999999999999999977664432
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
... ++... ..+.....||+..+++.....++++.+. |+.++.+...+.+..+++.|.+..|+
T Consensus 231 ~v~-------dyk~~--~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gf 293 (370)
T KOG2790|consen 231 SVL-------DYKIM--DKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGF 293 (370)
T ss_pred ccc-------ceeee--ccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 111 11111 1123334599999999999999999886 78999999999999999999988664
No 382
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.16 E-value=6.6e-10 Score=96.85 Aligned_cols=171 Identities=23% Similarity=0.306 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHcCCCCCC-cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHH----------HHHc
Q 017640 113 YELARKKVAAFINASDSG-EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV----------AQKT 181 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~-~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----------~~~~ 181 (368)
.+.+.+-.|+.||++..- ...|. ++|.||..++.++ ++|||+++.....-+. .+... .+.+
T Consensus 67 RdtLe~vyA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~----LRpgDell~i~G~PYD---TLeevIG~rg~~~gSL~df 138 (416)
T COG4100 67 RDTLERVYAQVFGAEAALVRPQII-SGTHAIACALFGI----LRPGDELLYITGSPYD---TLEEVIGLRGEGQGSLKDF 138 (416)
T ss_pred hhHHHHHHHHHhccccceeeeeee-cchhHHHHHHHhc----cCCCCeEEEecCCcch---hHHHHhccCCCCcccHHHh
Confidence 456888899999998641 22344 5578999999988 9999998877654333 33332 2456
Q ss_pred CCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc----ccccccCHHHHHHHHHhc--CCEEEEecCCcCCccccc
Q 017640 182 GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN----MLASILPIEEIVHWSHDV--GAKVLVDACQSVPHMVVD 255 (368)
Q Consensus 182 g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n----~tG~~~~l~~i~~l~~~~--g~~li~D~a~~~~~~~~~ 255 (368)
|++.+.|++..+|.+|.+.++..+.++||+|.+..... |+=.+..++++..+.|+- ++++++|.+|+-.....+
T Consensus 139 gi~Y~~v~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~E 218 (416)
T COG4100 139 GIKYKAVPLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKE 218 (416)
T ss_pred CcceeecccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccC
Confidence 78899999999999999999999999999998876521 111222256666666663 699999999996666566
Q ss_pred CCCCCccEEEecCcCcCCCC---cceEEEEcccccccCC
Q 017640 256 VQGLDADFLVASSHKMCGPT---GIGFLFGKSDLLSAMP 291 (368)
Q Consensus 256 ~~~~~~d~~~~s~~K~~g~~---G~G~l~~~~~li~~l~ 291 (368)
....+.|++.+|+-|.-|+. -.|++..++++++...
T Consensus 219 Pt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 219 PTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred ccccchhhhccceeeCCCCceeeccceeechHHHHHhhc
Confidence 66778999999999954421 2799999999988654
No 383
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.16 E-value=1.8e-09 Score=97.46 Aligned_cols=260 Identities=12% Similarity=0.076 Sum_probs=163.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|||..+ .|++.|.|.+++.+.+..++.... ....+-+.++.+.|+..+-.+-. .++|++|++
T Consensus 48 ~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~-------~~~~~pi~~~Ae~L~s~~P~~l~-~vfF~nsGs 119 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTS-------GYLNPPIHDLAEALVSKLPGDLK-VVFFVNSGS 119 (442)
T ss_pred CCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhhEEeec-------cccCCcHHHHHHHHHHhCCCCce-EEEEecCCc
Confidence 4556888754 668999999999998876543221 11234455788888888876654 789999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-----------CC---CCC--C-----H
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-----------DD---ESP--D-----L 198 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-----------~~---~~~--d-----~ 198 (368)
||++++++.... -...-.++-...+||++......+ .+......+.+ ++ +.. + -
T Consensus 120 EANelal~mar~--Yt~~~diIa~r~~YHG~t~~t~gl---t~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~ 194 (442)
T KOG1404|consen 120 EANELALKMARL--YTGNLDIIARRNSYHGNTLYTLGL---TGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEAS 194 (442)
T ss_pred hHHHHHHHHHHH--hcCCceEEEeeccccCCchhhccc---ccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhH
Confidence 999999987532 122335666666677654322222 12222211111 11 000 0 1
Q ss_pred ----HHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-C---CcccccCC--CCC
Q 017640 199 ----DKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-V---PHMVVDVQ--GLD 260 (368)
Q Consensus 199 ----~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~---~~~~~~~~--~~~ 260 (368)
++++..+. ..+.+++.+.++...|.+.+ +++..++|+++|.++|.||+|. + |++ +.++ ..-
T Consensus 195 d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~-wgfe~h~v~ 273 (442)
T KOG1404|consen 195 DRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHM-WGFESHGVV 273 (442)
T ss_pred HHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccccc-ccccccCCC
Confidence 22333332 24578889999988888876 8999999999999999999987 2 322 2333 334
Q ss_pred ccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 261 ~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
+|+++.+ |.+| +..+|.++..+++.+.+.......+ . -|.-|+. -++..+.++.+++
T Consensus 274 PDIvTmA--KgiGnG~Pl~AVvtt~EIa~v~~~~~~~fn-----------------T--yggnP~a-~avg~aVL~Vike 331 (442)
T KOG1404|consen 274 PDIVTMA--KGIGNGFPLGAVVTTPEIADVLNQKSSHFN-----------------T--YGGNPVA-CAVGLAVLKVIKE 331 (442)
T ss_pred ccHHHHH--hhccCCCcceeeecCHHHHHHHHhcccccc-----------------c--cCCCchh-HHHHHHHHHHHHH
Confidence 6766554 9655 3448999999998776654432111 1 1122222 2333444555554
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
+.+.++..+...|+.+.|.+..
T Consensus 332 ---e~LqE~aa~vG~yl~~~l~~l~ 353 (442)
T KOG1404|consen 332 ---ENLQENAAEVGSYLLEKLAALK 353 (442)
T ss_pred ---HhHHHHHHHHHHHHHHHHHHHh
Confidence 8889999999999999887653
No 384
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.10 E-value=4.1e-09 Score=97.11 Aligned_cols=177 Identities=16% Similarity=0.107 Sum_probs=124.7
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCC--------CCcEEEeCCHHHHHHHHHHHccCCC---CCCC-----------C-EEE
Q 017640 105 LSAKATDEYELARKKVAAFINASD--------SGEIVFTKNATEAINLVAYSWGLSN---LKSG-----------D-EVI 161 (368)
Q Consensus 105 ~~~~~~~~~~~~r~~la~~~~~~~--------~~~v~~t~g~t~a~~~~~~~~~~~~---~~~g-----------d-~vl 161 (368)
.++..+++..-+-++++++++.|. +..-++..+++++...++.+.+... ++.+ + .+.
T Consensus 107 ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y 186 (511)
T KOG0628|consen 107 SSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAY 186 (511)
T ss_pred cCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEE
Confidence 345567777778899999998871 1244666677777777766542110 1222 2 344
Q ss_pred EcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC------ceEEEEcccccccccccCHHHHHHHHH
Q 017640 162 LTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK------TKLVVIHHISNMLASILPIEEIVHWSH 235 (368)
Q Consensus 162 ~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~n~tG~~~~l~~i~~l~~ 235 (368)
.++..|.+ ++..|-..|.+++.++.+.++.++.+.|+++|.++ |-+++.+-.++.+-...++.+|..+|+
T Consensus 187 ~SDqahss----veka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~ 262 (511)
T KOG0628|consen 187 CSDQAHSS----VEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCR 262 (511)
T ss_pred ecCcccch----HHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhh
Confidence 55666655 56667777899999999999999999999999764 345556666555556667999999999
Q ss_pred hcCCEEEEecCCcCCcccc-cCCC-----CCccEEEecCcCcCC-CCcceEEEEccc
Q 017640 236 DVGAKVLVDACQSVPHMVV-DVQG-----LDADFLVASSHKMCG-PTGIGFLFGKSD 285 (368)
Q Consensus 236 ~~g~~li~D~a~~~~~~~~-~~~~-----~~~d~~~~s~~K~~g-~~G~G~l~~~~~ 285 (368)
++|+|+++|++|+-...-. ++.. ...|.+.+..||++- --.|.-+|+++.
T Consensus 263 ~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~ 319 (511)
T KOG0628|consen 263 EEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDG 319 (511)
T ss_pred hcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecC
Confidence 9999999999999444311 1111 147899999999643 334888888886
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.95 E-value=2.3e-08 Score=95.55 Aligned_cols=237 Identities=16% Similarity=0.172 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC-HHH---HHHHHHHHccCCCCCCC----CEEEEcCCCCcccHHHHHHHH
Q 017640 107 AKATDEYELARKKVAAFINASDSGEIVFTKN-ATE---AINLVAYSWGLSNLKSG----DEVILTVAEHHSAIVPWQLVA 178 (368)
Q Consensus 107 ~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g-~t~---a~~~~~~~~~~~~~~~g----d~vl~~~~~~~s~~~~~~~~~ 178 (368)
.+..+++.++++.|.+..|.+ .+.|.++ +.+ +=..+++++ ...+| ...+++-..|..+... +
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D---~~s~QPNsGA~GEYaGL~~IRaY---~~~kge~hRnvClIPvSAHGTNPAS----A 647 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFD---SFSLQPNSGAQGEYAGLRVIRAY---LESKGEGHRNVCLIPVSAHGTNPAS----A 647 (1001)
T ss_pred hhHHHHHHHHHHHhheeeccc---ceeecCCCCcccchhhHHHHHHH---HHhccCCcceeEEEeecccCCChhh----H
Confidence 345788889999999999986 5666642 222 334455555 23333 3578888788776533 3
Q ss_pred HHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccccccccC-HHHHHHHHHhcCCEEEEecCCcCCcccc
Q 017640 179 QKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQSVPHMVV 254 (368)
Q Consensus 179 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~g~~li~D~a~~~~~~~~ 254 (368)
...|.+++.|.++.+|.+|..+|+++.++ +-.+++++.|++. |+.-+ +++++++.|+||-.|..|++..-..+-+
T Consensus 648 ~MagmkvvpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGl 726 (1001)
T KOG2040|consen 648 AMAGMKVVPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGL 726 (1001)
T ss_pred HhcCCEEEEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhcCCEEEecCCCccceecc
Confidence 45699999999999999999999988765 3478889888775 55555 9999999999999999999987554433
Q ss_pred -cCCCCCccEEEecCcCcC------CCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCC-CCCCCHHH
Q 017640 255 -DVQGLDADFLVASSHKMC------GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFE-AGTPAIGE 326 (368)
Q Consensus 255 -~~~~~~~d~~~~s~~K~~------g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~gt~~~~~ 326 (368)
...+.+.|+.-..+||.| |++|+|=+-+++.+...+. +...+.-... .....+. ....++.+
T Consensus 727 c~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP----~HpVvs~~~~------~~~~~~gsVsaaP~Gs 796 (1001)
T KOG2040|consen 727 CRPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLP----SHPVVSPGRP------EDTSPVGSVSAAPWGS 796 (1001)
T ss_pred cCCccccccceeecccceeeecCCCCCCCCCccchhhhccccCC----CCCccCCCCC------CCCCCccceeccCCCc
Confidence 456678999999999965 2445777778877765554 2111100000 0000000 00111111
Q ss_pred HHHH---HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 327 AIGL---GAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 327 ~~a~---~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
..-+ .+.++++...|++...+-..-+++|+.++|+.+.
T Consensus 797 a~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hY 837 (1001)
T KOG2040|consen 797 ALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHY 837 (1001)
T ss_pred ceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhcc
Confidence 1112 2334445555777777777788899999988653
No 386
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.88 E-value=2.2e-09 Score=98.49 Aligned_cols=178 Identities=15% Similarity=0.106 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHH-HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNAT-EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t-~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+-..+..-+.+..|.+.....++++-+| .++.+.+.+++ .-..++.|+.+..+|.+.+.+. ...|.+++.|+.
T Consensus 57 ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~--~r~~a~~Viw~ridqkSc~kai----~~AGl~~~vV~~ 130 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALR--MRPKAKYVIWPRIDQKSCFKAI----ERAGLEPVVVEN 130 (389)
T ss_dssp HHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHH--HHCT--EEEEEEEETHHHHHHH----HHTT-EEEEE-E
T ss_pred HHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHh--cccCCceEEEeeccccchHHHH----HhcCCeEEEeec
Confidence 3334555566678887544566776665 24445555552 1246789999999998865544 445999999986
Q ss_pred C--CC-CCCCHHHHHHhccc---CceEEEEcccccccccccC-HHHHHHHHHhcCCEEEEecCCcCCcccc----c--CC
Q 017640 191 N--DD-ESPDLDKLKEMLSR---KTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQSVPHMVV----D--VQ 257 (368)
Q Consensus 191 ~--~~-~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~g~~li~D~a~~~~~~~~----~--~~ 257 (368)
. +| -..|++.+|+.+++ +..+.++++.+-.-|...| +++|+++|++||+..++-.||+...... + ..
T Consensus 131 ~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~ 210 (389)
T PF05889_consen 131 VLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWR 210 (389)
T ss_dssp EEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHH
T ss_pred cCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHh
Confidence 4 23 23367888887753 5578888888888888888 9999999999999999999999843311 0 01
Q ss_pred CCCccEEEecCcC-cCCCCcceEEEEcc-cccccCCCccc
Q 017640 258 GLDADFLVASSHK-MCGPTGIGFLFGKS-DLLSAMPPFLG 295 (368)
Q Consensus 258 ~~~~d~~~~s~~K-~~g~~G~G~l~~~~-~li~~l~~~~~ 295 (368)
.-..|+++-|.-| ++-|-|.++++... ..+..+...+.
T Consensus 211 ~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~Yp 250 (389)
T PF05889_consen 211 VGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKEYP 250 (389)
T ss_dssp HSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHTSH
T ss_pred cCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHHhh
Confidence 1146777777778 55566766666544 45555444443
No 387
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.64 E-value=5.6e-07 Score=79.23 Aligned_cols=227 Identities=12% Similarity=0.086 Sum_probs=133.5
Q ss_pred HHHHHHHHHH-cCCCCC----CcE--EEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC-EE
Q 017640 114 ELARKKVAAF-INASDS----GEI--VFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-NL 185 (368)
Q Consensus 114 ~~~r~~la~~-~~~~~~----~~v--~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-~v 185 (368)
..++...+++ +|.+++ +.+ +-+-|+|.|+...+.-+.. +-+...|.+++|.+... ..+++..|. ++
T Consensus 77 ~~F~~~A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~--~~~~~~VY~SnPTW~nH----~~if~~aGf~tv 150 (410)
T KOG1412|consen 77 PTFTKAATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLAT--FYNKNTVYVSNPTWENH----HAIFEKAGFTTV 150 (410)
T ss_pred hhhhhhhHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHH--hcccceeEecCCchhHH----HHHHHHcCCcee
Confidence 3455545544 455421 232 4455778889888876632 34566899999966664 444455583 44
Q ss_pred EEEeCC--CCCCCCHHHHHHhcccCc--eEEEEccc-ccccccccC---HHHHHHHHHhcCCEEEEecCCc-CCcccccC
Q 017640 186 KFLNLN--DDESPDLDKLKEMLSRKT--KLVVIHHI-SNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHMVVDV 256 (368)
Q Consensus 186 ~~v~~~--~~~~~d~~~l~~~l~~~~--~~v~~~~~-~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~~~~~ 256 (368)
...+.= ++-.+|++.+...|+..| .++++..| +||||.-.. +.+|++..++++.+.++|-+|- +..-.++-
T Consensus 151 ~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~ 230 (410)
T KOG1412|consen 151 ATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDA 230 (410)
T ss_pred eeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccc
Confidence 444432 345679998888886544 56666766 999998876 5677777888999999999954 33333333
Q ss_pred CCC--------Cc-cEEEecCcCcCCCCc--ceEEE---EcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCC
Q 017640 257 QGL--------DA-DFLVASSHKMCGPTG--IGFLF---GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTP 322 (368)
Q Consensus 257 ~~~--------~~-d~~~~s~~K~~g~~G--~G~l~---~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~ 322 (368)
+.+ +. -|++-||.|.||..+ +|-+- -++..+..+...+.= ..|.+...|
T Consensus 231 DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~l-----------------viR~~~SNP 293 (410)
T KOG1412|consen 231 DAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTL-----------------VIRSNWSNP 293 (410)
T ss_pred cHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHH-----------------HHhhccCCC
Confidence 222 33 356669999988776 55543 244444443322210 011111122
Q ss_pred CHHHHHHHHHHHH---HHHHh--CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 323 AIGEAIGLGAAID---YLSTI--GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 323 ~~~~~~a~~~al~---~~~~~--g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+..+.--.+..|. +.+++ .++.+.-|+.+++..+++.|..+
T Consensus 294 PAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL 339 (410)
T KOG1412|consen 294 PAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVAL 339 (410)
T ss_pred cchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2221111221111 12221 47888899999999999988765
No 388
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.56 E-value=3.9e-07 Score=87.32 Aligned_cols=278 Identities=14% Similarity=0.134 Sum_probs=168.9
Q ss_pred EeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 70 YLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 70 ~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
|++-+.+. ..|+.+..-+.+.-..+..+... ....+++-.+.+-..+..++++.|.+-. +--+..-+|.|-+.+..+
T Consensus 122 fIGmGYyn~~vP~~I~RNilenp~W~TqYTPY-Q~EIsQGRLEsllNyQTmi~dlTGL~~a-NASLLDEgTAaaEAm~l~ 199 (1001)
T KOG2040|consen 122 FIGMGYYNTHVPAVILRNILENPGWYTQYTPY-QAEISQGRLESLLNYQTMITDLTGLPMA-NASLLDEGTAAAEAMALC 199 (1001)
T ss_pred hhccccccccCcHHHHHHhhhCCcceeccCCC-chhhhhhhHHHHhhhHHhhhhccCCccc-chhhhccchhHHHHHHHH
Confidence 34444444 55666655554433322222111 1223444556666788899999999854 444444445555555555
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
. ...++.++++...+|+.+..-.+.-++..|++++..+ +.+.. ...++...+.+..|.+ -|.+.+..
T Consensus 200 ~---~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~--------~~~~~-~s~~~v~gvlvQYP~t-~G~i~d~~ 266 (1001)
T KOG2040|consen 200 N---RINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSD--------IKEAD-YSSKDVSGVLVQYPDT-EGSVLDFD 266 (1001)
T ss_pred H---hhcccceEEecCCCCcchhhhhhccccccceeEEecC--------HHHhh-ccccceeEEEEEcCCC-CCcccCHH
Confidence 5 3667778999999999987766666665666644333 22211 1123456677777654 68999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc---CCCCc--ceEEEEcccccccCCCcccCCcceeec
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM---CGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDV 303 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~---~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~ 303 (368)
++++.+++.|.++++-.---.-.+.-...+++.|+.++|.+.+ +|..| .||+.+++++.+.+...+.|.+-...-
T Consensus 267 el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~g 346 (1001)
T KOG2040|consen 267 ELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALG 346 (1001)
T ss_pred HHHHHhhccCceEEEeehhhHHHccCChhhcCceeeeccccccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccc
Confidence 9999999999876642111111111134567999999999985 23333 899999999988887776654321100
Q ss_pred ccCC---CCCCCCCCCCCCCCCCHHHHHHHHHHHH-----HHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 304 FLDH---STFADPPSRFEAGTPAIGEAIGLGAAID-----YLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 304 ~~~~---~~~~~~~~~~~~gt~~~~~~~a~~~al~-----~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
...+ ..-.+.+-|.+-.|.|+...-|+.+-+. ++...|++.|.+|+..+...+...|++
T Consensus 347 k~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ 413 (1001)
T KOG2040|consen 347 KEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKN 413 (1001)
T ss_pred cHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0000 0001233456667888876555443332 233448999999999999999988874
No 389
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.50 E-value=1e-05 Score=72.85 Aligned_cols=200 Identities=18% Similarity=0.169 Sum_probs=128.4
Q ss_pred CCeEEecc---CCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDN---AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.+-+++|- .+++.++..+..++-+--+.+.++ .....+++++.+.||.. .++.|.-+..|=
T Consensus 44 Sedv~IDLLTDSGTgams~~qwaamm~GDEAYags-------------rs~~~L~~avkdifGfq---~~iPthQGRgAE 107 (471)
T COG3033 44 SEDVFIDLLTDSGTGAMTDKQWAAMMRGDEAYAGS-------------RSYYALADAVKDIFGFQ---YTIPTHQGRGAE 107 (471)
T ss_pred ccceEEEeeccCCcccccHHHHHHHhccchhhccc-------------ccHHHHHHHHHHhcCce---eeeeccCCccHH
Confidence 33455554 455678888777776544443222 12227888888999974 667776555555
Q ss_pred HHHHHHcc-CCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC----------CCCCCHHHHHHhccc----
Q 017640 143 NLVAYSWG-LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----------DESPDLDKLKEMLSR---- 207 (368)
Q Consensus 143 ~~~~~~~~-~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~----------~~~~d~~~l~~~l~~---- 207 (368)
+.++..+. .....||.+.++++..|+.+. +...+..|+.++-++.++ .|.+|++.|++.|++
T Consensus 108 ~Il~~i~ik~~~~~pg~~~~~~sN~~FdTT---r~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~ 184 (471)
T COG3033 108 NILIPILIKKGEQEPGSKMVAFSNYHFDTT---RGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGAD 184 (471)
T ss_pred HHHHHHHhhhccccCCccccccccceecch---hHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcc
Confidence 55544441 112345667777777777654 444556788888777663 268899999999975
Q ss_pred CceEEEEcccc-cccccccC---HHHHHHHHHhcCCEEEEecCCc------C-----CcccccCCC------CCccEEEe
Q 017640 208 KTKLVVIHHIS-NMLASILP---IEEIVHWSHDVGAKVLVDACQS------V-----PHMVVDVQG------LDADFLVA 266 (368)
Q Consensus 208 ~~~~v~~~~~~-n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~------~-----~~~~~~~~~------~~~d~~~~ 266 (368)
+...|+++-.+ +-.|+-.+ ++++.++|++|++.++.|.+-- + +...+.+.+ ..+|-.+.
T Consensus 185 nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~m 264 (471)
T COG3033 185 NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTM 264 (471)
T ss_pred cCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhhee
Confidence 44555544443 44555555 7899999999999999999832 1 111111111 24788999
Q ss_pred cCcC-cCCCCcceEEEEccc
Q 017640 267 SSHK-MCGPTGIGFLFGKSD 285 (368)
Q Consensus 267 s~~K-~~g~~G~G~l~~~~~ 285 (368)
|..| .+..-| |++..+++
T Consensus 265 S~KKD~lvnmG-Gfl~~~D~ 283 (471)
T COG3033 265 SAKKDGLVNMG-GFLCFKDD 283 (471)
T ss_pred eccccceeccc-cEEEecCc
Confidence 9999 566665 89998887
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.48 E-value=1.8e-06 Score=75.71 Aligned_cols=261 Identities=13% Similarity=0.125 Sum_probs=151.6
Q ss_pred CeEEeccCC----CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 67 KLVYLDNAA----TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 67 ~~i~l~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+--|||.-. .+.+.|+|.++....+.....|.- .. ..++.+-.+...+.+=+++ .++|++++++|+
T Consensus 46 g~~yLDCInNVaHvghchp~VV~A~~kQmat~~tN~R-Fl------hd~lv~cA~~l~stlPeLs---vc~F~NSGSEAN 115 (452)
T KOG1403|consen 46 GTRYLDCINNVAHVGHCHPEVVRAGAKQMATISTNNR-FL------HDELVQCARTLTSTLPELS---VCFFVNSGSEAN 115 (452)
T ss_pred cccHHHHhhhhhhcccCCHHHHHHHHHHHhHhcccch-hh------HHHHHHHHHHHhhcCCCce---EEEEecCCchhh
Confidence 334555422 457899999999888877655431 11 1344444555555444443 678999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-----cC-CEEEEEeC--CCC---CC--------CC-----H
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-----TG-ANLKFLNL--NDD---ES--------PD-----L 198 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-----~g-~~v~~v~~--~~~---~~--------~d-----~ 198 (368)
.++++..+ ...+.+-+++.+..|++.......+... .+ .++.+|-+ -+| |. -| .
T Consensus 116 DLALRLAR--~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Ya 193 (452)
T KOG1403|consen 116 DLALRLAR--NFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYA 193 (452)
T ss_pred HHHHHHHH--hhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhh
Confidence 99999653 2445555677777888765443332110 11 12222221 121 10 01 1
Q ss_pred HHHHHhccc------CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc-----cccCCCCCcc
Q 017640 199 DKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM-----VVDVQGLDAD 262 (368)
Q Consensus 199 ~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~-----~~~~~~~~~d 262 (368)
+.+++.+.+ ...+++.++-++-.|+++| .+++++..|.+|-+.|.|++|. +|.+ .+....+-+|
T Consensus 194 d~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPD 273 (452)
T KOG1403|consen 194 DPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPD 273 (452)
T ss_pred hHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccc
Confidence 233333322 3456677777788999998 7899999999999999999986 3332 1122234577
Q ss_pred EEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 263 FLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 263 ~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
+++.. |-.| +..++.++..+++.+.+...-. .-|.....|.. +.+.++..++...
T Consensus 274 IVtmg--KpmGNGhPVa~VattkeIA~Af~atgv-------------------~YFNTyGGnPV---sCAv~laVm~v~e 329 (452)
T KOG1403|consen 274 IVTMG--KPMGNGHPVAAVATTKEIAQAFHATGV-------------------EYFNTYGGNPV---SCAVGLAVMRVCE 329 (452)
T ss_pred hheec--ccCCCCCeeeEEeccHHHHHHhccccc-------------------eehhccCCCch---hHHHHHHHHHHHh
Confidence 77765 8544 5558999999988765542211 11221112222 2333334344434
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 017640 342 MQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
-+.+.++..+.-.++...|++.
T Consensus 330 ~E~Lq~ha~~vG~~L~~lL~~~ 351 (452)
T KOG1403|consen 330 DENLQEHAQQVGEKLEVLLRRL 351 (452)
T ss_pred hhhHHHHHHHHHHHHHHHHHHH
Confidence 4677778777777777777654
No 391
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=98.21 E-value=1.9e-05 Score=64.41 Aligned_cols=94 Identities=11% Similarity=0.085 Sum_probs=60.1
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHH--------------HHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC--CC-C
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNY--------------YEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN--AS-D 128 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~-~ 128 (368)
.++|.|+-+.+.+..+.+...+.+. ......+. ...+..+..+.+.+.+.+.+| .+ .
T Consensus 43 ~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~a~Y~------~~~G~~~lR~AiA~~l~~~~g~~v~~~ 116 (153)
T PLN02994 43 QGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDIALFQ------DYHGLANFRKAIANFMAEARGGRVKFD 116 (153)
T ss_pred CceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHHhcCC------CCCCcHHHHHHHHHHHHHHhCCCCccc
Confidence 7899999998766555444444331 11110010 011123344444444545545 22 2
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcc
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHS 169 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s 169 (368)
+++|++|+|+++++..++.++ +++||.|++.+|.|++
T Consensus 117 pd~Ivvt~Ga~~al~~l~~~l----~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 117 ADMIVLSAGATAANEIIMFCI----ADPGDAFLVPTPYYAA 153 (153)
T ss_pred hhheEEcCCHHHHHHHHHHHH----cCCCCEEEEeCCCCCC
Confidence 349999999999999999998 8999999999998864
No 392
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.19 E-value=2.5e-05 Score=69.97 Aligned_cols=201 Identities=16% Similarity=0.099 Sum_probs=122.9
Q ss_pred CCeEEeccCCCC------CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CCCC----CCcEE-
Q 017640 66 KKLVYLDNAATS------QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NASD----SGEIV- 133 (368)
Q Consensus 66 ~~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~~----~~~v~- 133 (368)
+..++|+.+++- ...+.|++|-++.+.. +... .+.....+.++.+.-+++. |... +..|+
T Consensus 52 ~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~---~ldK-----EYlpI~Gl~eF~k~sakLa~G~~s~~ik~~Ri~t 123 (427)
T KOG1411|consen 52 PKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASL---SLDK-----EYLPITGLAEFNKLSAKLALGDNSPVIKEKRIVT 123 (427)
T ss_pred cceeeecccceecCCCCeeeeHHHHHHHHHHhhh---cccc-----hhccccchHHHHHHHHHHhhcCCchhhhccceeE
Confidence 455777766532 3566777776555441 1110 1111223345555555554 4432 22443
Q ss_pred -EeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcccCc-
Q 017640 134 -FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSRKT- 209 (368)
Q Consensus 134 -~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~- 209 (368)
-+-++|.|+......+. ..-++..|.+++|.+....+.+.. .|..+..+..- ....+|.+.+.+.+...+
T Consensus 124 vQ~lSGTGaLriga~Fl~--~f~~~~~I~ip~PTWgNh~~if~~----ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~ 197 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLA--RFYPSRDIYIPDPTWGNHKNIFKD----AGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPE 197 (427)
T ss_pred EEeccCcchhhHHHHHHH--hhccccceeecCCcccccCccccc----cCcceeeeeeccccccccchHHHHHHHhcCCC
Confidence 33577888888887664 356788999999987775554444 47777555543 345668887777665533
Q ss_pred --eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCc-CCcccccCCC--------CCcc-EEEecCcCcCCC
Q 017640 210 --KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHMVVDVQG--------LDAD-FLVASSHKMCGP 274 (368)
Q Consensus 210 --~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~~~~~~~--------~~~d-~~~~s~~K~~g~ 274 (368)
.+++-...|||||+-.. +++|.++.++.+.+-++|.+|- +..-.++.+. .+.. +++-|+.|.+|.
T Consensus 198 gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGL 277 (427)
T KOG1411|consen 198 GSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGL 277 (427)
T ss_pred CcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcch
Confidence 44445556999998766 6788888999999999999965 2222222221 1333 556699998888
Q ss_pred Cc--ceEE
Q 017640 275 TG--IGFL 280 (368)
Q Consensus 275 ~G--~G~l 280 (368)
.| +|.+
T Consensus 278 YgERvGa~ 285 (427)
T KOG1411|consen 278 YGERVGAL 285 (427)
T ss_pred hhhcccee
Confidence 77 5554
No 393
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.77 E-value=2.8e-05 Score=70.12 Aligned_cols=142 Identities=18% Similarity=0.230 Sum_probs=75.2
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCC--CEEEEcCCCCcccHHHHHHHHHHcC-CEEEEEeCCCCCCCCHHHHHHhc
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSG--DEVILTVAEHHSAIVPWQLVAQKTG-ANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~g--d~vl~~~~~~~s~~~~~~~~~~~~g-~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
+..|+|++|+|+.++.++-++.-.....+ -.|+...|.|++ ++....... ...++-- |...+.+.-
T Consensus 66 gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~----Y~~qt~~f~s~~y~w~G-------da~~~~~~~ 134 (363)
T PF04864_consen 66 GRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSS----YPEQTDFFDSRLYKWAG-------DASNFKNSD 134 (363)
T ss_dssp TSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CH----HHHHCCCT-BTTEEEEE-------ECCCGTT-S
T ss_pred CcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccc----hHHHHHhccccCccccc-------cHHhhccCC
Confidence 34899999999999999999842201122 257777776555 333222111 1112111 111111111
Q ss_pred ccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-cccCCCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 206 SRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-VVDVQGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
.+.+-+=+++.|+||.|.+ -+.+ ++.-+..+|.|-+|..++. |+.- ..+-|++.+++||.=|=.| +||.++
T Consensus 135 ~~~~~IElVTSPNNPDG~l--r~~V---~~g~~~k~I~D~AYYWPhyTpI~~-~aD~DiMLFT~SK~TGHAGSR~GWAlV 208 (363)
T PF04864_consen 135 NPSPYIELVTSPNNPDGQL--REAV---LNGSSGKVIHDLAYYWPHYTPITA-PADHDIMLFTLSKLTGHAGSRFGWALV 208 (363)
T ss_dssp -CCGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-STTTS---S--B--SEEEEEHHHHCS-GGG-EEEEEE
T ss_pred CCCCeEEEEeCCCCCcccc--cchh---cCCCCcceeeeeeeecccccccCC-CCCCceEEEEEecccCccccccceeee
Confidence 1233455899999999987 2222 2445567899999998876 4433 3578999999999766555 999999
Q ss_pred ccccc
Q 017640 283 KSDLL 287 (368)
Q Consensus 283 ~~~li 287 (368)
+++-+
T Consensus 209 KD~~V 213 (363)
T PF04864_consen 209 KDEEV 213 (363)
T ss_dssp S-HHH
T ss_pred cCHHH
Confidence 98644
No 394
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=97.55 E-value=4.3e-05 Score=73.73 Aligned_cols=279 Identities=18% Similarity=0.141 Sum_probs=171.7
Q ss_pred EeccCCCCCCcHHHHHHHHH-HHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC-CCcEEEeCCHHHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQN-YYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~a~~~~~~ 147 (368)
|+|++......+...+.... .-.....|||. ....+..........|-++..+++-.. ++.++++. .++|+..++.
T Consensus 23 yldhag~tl~sesq~~g~~~~sq~~e~~nphs-~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae 100 (728)
T KOG2142|consen 23 YLDHAGRTLFSESQLEGVAFQSQSSENANPHS-HLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAE 100 (728)
T ss_pred HHHhhhhhhhhhcccchhhhhhhccccCCCcc-cccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHH
Confidence 99999888877777766432 22234456663 344444556667777777888887653 34788888 9999999999
Q ss_pred HccCCCCCCCCEEEEc---CCCCcccHHHHHHHHHHc-CCEEEE-EeCCC---CCCCCHHHHHHhcccCceEEEEccccc
Q 017640 148 SWGLSNLKSGDEVILT---VAEHHSAIVPWQLVAQKT-GANLKF-LNLND---DESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~---~~~~~s~~~~~~~~~~~~-g~~v~~-v~~~~---~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
++.+ ...+.+|--. ...|.+.. ...++..+ |+-+.. +...+ ....++.+...-+ ....+.+.....|
T Consensus 101 ~fp~--~s~tekid~lrs~~y~hls~s--~~~~~~~~~~~gl~sy~q~~~i~~~~~~sls~~~~~l-s~~~L~~g~a~~n 175 (728)
T KOG2142|consen 101 AFPF--YSQTEKIDNLRSDEYGHLSSS--GHLMRLDYSGIGLFSYSQTNEISDSEEFSLSESEANL-SEHSLFGGAAQSN 175 (728)
T ss_pred hCcc--ccccccccchhhhhhcccccc--cceeeeeeeccceEEeeeeeeccccccccccccccCc-ccchhcccchhcc
Confidence 9953 3344333322 22222221 00111111 222221 12221 1111111111111 1346677777778
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
..|..+-.+.+-.+.-..+.++++|.+.-..+.+++.+.+.+|+... +.|+||-+. |.+.+..+..+.. |++.
T Consensus 176 feg~kik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~-lltiFgyet-gAvlv~~r~A~~~-----Ggkt 248 (728)
T KOG2142|consen 176 FEGDKIKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPK-LLTIFGYET-GAVLVMNRSAELK-----GGKT 248 (728)
T ss_pred cccceeeeeeecccccCCceEEEEEeecccccccchHhhCCCcccch-heeecCCCc-hhhHHHhhhhHhh-----cCcc
Confidence 88876443333333335678999999999999999999999999999 999999665 5555544433222 5555
Q ss_pred eeecccCCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHh
Q 017640 300 ISDVFLDHSTF---ADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 300 ~~~~~~~~~~~---~~~~~~~~~gt~~~~~~~a~~~al~~~~~~--g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
..+.+.-..-+ .....||+.|+.+...++++...+...... ++..+..+...++++.+..|..
T Consensus 249 ~sa~f~wp~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda 316 (728)
T KOG2142|consen 249 ASAEFSWPMLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDA 316 (728)
T ss_pred ceeecccchHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhh
Confidence 44433221111 235578999999999999988888877765 6788888888888888888764
No 395
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.01 E-value=0.0024 Score=55.57 Aligned_cols=181 Identities=14% Similarity=0.128 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHH-HHHHHHHHHccCCCCCCCC-EEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNAT-EAINLVAYSWGLSNLKSGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t-~a~~~~~~~~~~~~~~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
...++...+..+.|...-.+.++++=+| .++.+.+.+++. -+|.- .|+-...+..|.+..+.. .|.+++.+.
T Consensus 58 isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~--krpkakyiiw~ridqks~~ksi~~----agfepiiie 131 (432)
T KOG3843|consen 58 ISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRH--KRPKAKYIIWLRIDQKSCFKSIIH----AGFEPIIIE 131 (432)
T ss_pred HHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhh--cCCcccEEEEEecchHHHHHHHHh----cCCCceeee
Confidence 3345555566677766322333332221 356666666642 34443 455555555554433333 388877776
Q ss_pred CCCCC---CCCHHHHHHhccc-Cce-EEEEcccccccccccC--HHHHHHHHHhcCCEEEEecCCcCCcccc------cC
Q 017640 190 LNDDE---SPDLDKLKEMLSR-KTK-LVVIHHISNMLASILP--IEEIVHWSHDVGAKVLVDACQSVPHMVV------DV 256 (368)
Q Consensus 190 ~~~~~---~~d~~~l~~~l~~-~~~-~v~~~~~~n~tG~~~~--l~~i~~l~~~~g~~li~D~a~~~~~~~~------~~ 256 (368)
.-.++ .-|++.+++.+++ ... ++|+...++-..-..| +++|+.+|..|+++-++..+|++..... ..
T Consensus 132 ~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~iaa~~ 211 (432)
T KOG3843|consen 132 NILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHKIAAAA 211 (432)
T ss_pred ccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHHHHHHh
Confidence 54332 3378888888765 233 3344333322222333 9999999999999999999999765411 01
Q ss_pred CCCCccEEEecCcCcC-CCCcceEEE-EcccccccCCCcccCCc
Q 017640 257 QGLDADFLVASSHKMC-GPTGIGFLF-GKSDLLSAMPPFLGGGE 298 (368)
Q Consensus 257 ~~~~~d~~~~s~~K~~-g~~G~G~l~-~~~~li~~l~~~~~g~~ 298 (368)
+--..|.++-|+-|.| -|-|.+++. .++.+|..+.+.++|..
T Consensus 212 ~~grida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypgra 255 (432)
T KOG3843|consen 212 ECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPGRA 255 (432)
T ss_pred hhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHHhCCCcc
Confidence 1124788999999955 466645443 46777777777666533
No 396
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.99 E-value=0.067 Score=48.79 Aligned_cols=85 Identities=13% Similarity=0.214 Sum_probs=57.7
Q ss_pred CHHHHHHhccc------CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcc--------cccCCC
Q 017640 197 DLDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM--------VVDVQG 258 (368)
Q Consensus 197 d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~--------~~~~~~ 258 (368)
.++++|+.|.+ ...+++++.+++..|--.- ++.|.++|++||+.+|+|++|.-|.. .++++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~- 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD- 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC-
Confidence 35566666643 2478899999999887654 88999999999999999999874321 23333
Q ss_pred CCccEEEecCcCcCCCCcceEEEEccccc
Q 017640 259 LDADFLVASSHKMCGPTGIGFLFGKSDLL 287 (368)
Q Consensus 259 ~~~d~~~~s~~K~~g~~G~G~l~~~~~li 287 (368)
..+|++++| |-|-..| .+-+++++
T Consensus 333 ~PpD~vTFS--KK~q~gG---ffh~~~fr 356 (484)
T KOG1405|consen 333 SPPDVVTFS--KKFQTGG---FFHDEEFR 356 (484)
T ss_pred CCccceehh--hhhhcCc---cccCcccC
Confidence 247888776 7444333 34455543
No 397
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=90.97 E-value=0.13 Score=50.55 Aligned_cols=170 Identities=19% Similarity=0.168 Sum_probs=112.8
Q ss_pred HHHHHHHHcCCCCCC-cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcc-cHHHHHHHHHHcCCEEEEEeCC-C
Q 017640 116 ARKKVAAFINASDSG-EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHS-AIVPWQLVAQKTGANLKFLNLN-D 192 (368)
Q Consensus 116 ~r~~la~~~~~~~~~-~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s-~~~~~~~~~~~~g~~v~~v~~~-~ 192 (368)
++..+..+++.+..+ -+++|.+-..+..+.+.+.+ .+-... ++.--+|++ ...-....++..|+++.-.-.. +
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~---f~~~~~-lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp 256 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYP---FDFNPK-LLTIFGYETGAVLVMNRSAELKGGKTASAEFSWP 256 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCC---Ccccch-heeecCCCchhhHHHhhhhHhhcCccceeecccc
Confidence 777888888887554 55888888889999998873 332222 433334443 2222344555567665443333 2
Q ss_pred CCCCCHHHHHHhcccCc--------eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc---cCCCCCc
Q 017640 193 DESPDLDKLKEMLSRKT--------KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV---DVQGLDA 261 (368)
Q Consensus 193 ~~~~d~~~l~~~l~~~~--------~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~---~~~~~~~ 261 (368)
...+--++|++.+...+ .+.+++...-.||..+++.++ .++.+.+++++.|.-+- |...+ ....+.+
T Consensus 257 ~~~l~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wm-t~al~~~whvlLda~~l-G~kdmd~yglS~f~P 334 (728)
T KOG2142|consen 257 MLYLLSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWM-TLALANNWHVLLDALAL-GPKDMDSYGLSLFQP 334 (728)
T ss_pred hHHHHHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHH-HHHHhhhHHHHHhhhcc-CcchHhhhhhhccCc
Confidence 23333456666665422 356788888889999999877 67888889999998765 33222 2334569
Q ss_pred cEEEecCcCcCC---CCcceEEEEcccccccCC
Q 017640 262 DFLVASSHKMCG---PTGIGFLFGKSDLLSAMP 291 (368)
Q Consensus 262 d~~~~s~~K~~g---~~G~G~l~~~~~li~~l~ 291 (368)
|+...++.+.|| |.|.|++.+++..+-.+.
T Consensus 335 dfqg~sf~fv~g~d~psgfGcl~VkKs~i~~l~ 367 (728)
T KOG2142|consen 335 DFQGPSFYFVFGRDDPSGFGCLEVKKSAISGLE 367 (728)
T ss_pred cceeeeEEEEeccCCCCceeeeeeehhhhhcee
Confidence 999999999887 556999999987766554
No 398
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=82.71 E-value=21 Score=33.33 Aligned_cols=122 Identities=7% Similarity=0.018 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHcCCCC--CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEE-EEcCCCCcccHH--HHHHHHHHcCCEEEE
Q 017640 113 YELARKKVAAFINASD--SGEIVFTKNATEAINLVAYSWGLSNLKSGDEV-ILTVAEHHSAIV--PWQLVAQKTGANLKF 187 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~--~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~v-l~~~~~~~s~~~--~~~~~~~~~g~~v~~ 187 (368)
.+++++.+.++-+... -+.|+-.+||-.+..++..... ..+ -+.+ +..++.+.+-.. ....+++..|++...
T Consensus 42 ~~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~--~~g-l~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~ 118 (343)
T TIGR03573 42 EKELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKK--KLG-LNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHT 118 (343)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHH--HhC-CceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 3345555554443322 2355666888776666533210 011 1223 455665553222 567778888999888
Q ss_pred EeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc--cCHHHHHHHHHhcCCEEEEecCCc
Q 017640 188 LNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI--LPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 188 v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~--~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
+.++ .+.+........+ +..+|...+ .....+.++|+++|+.+|+.+.++
T Consensus 119 i~~d------~~~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 119 ITIN------PETFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred EeCC------HHHHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 8764 3333322211111 111221111 125678899999999999998865
No 399
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=79.93 E-value=7 Score=35.96 Aligned_cols=144 Identities=17% Similarity=0.190 Sum_probs=84.3
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCc--ccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEE
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHH--SAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~--s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~ 213 (368)
|=|..+--+..-+ .+.|..|++...+-+ +....++.++++.|+.++.-+...| -.+-.++++.+...+..+|+
T Consensus 151 GKTTTIaKLA~~l----~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~Dvvl 226 (340)
T COG0552 151 GKTTTIAKLAKYL----KQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVL 226 (340)
T ss_pred chHhHHHHHHHHH----HHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEE
Confidence 3366666666656 677877777765433 4455677888999988876542111 12334667778778888888
Q ss_pred Eccc---ccccccccCHHHHHHHHHhcC------CEEEEecCCcCCcc---cccCCCCCccEEEecCcCcCC-CCcceEE
Q 017640 214 IHHI---SNMLASILPIEEIVHWSHDVG------AKVLVDACQSVPHM---VVDVQGLDADFLVASSHKMCG-PTGIGFL 280 (368)
Q Consensus 214 ~~~~---~n~tG~~~~l~~i~~l~~~~g------~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~g-~~G~G~l 280 (368)
+... ||-+..+-.+++|.+++++.. ++++.|++.+--.+ ..=-+..+.|-++.+ |+=| ..|.-++
T Consensus 227 iDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiIlT--KlDgtAKGG~il 304 (340)
T COG0552 227 IDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGIILT--KLDGTAKGGIIL 304 (340)
T ss_pred EeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEEEE--ecccCCCcceee
Confidence 8765 333333333677777777643 77788999763222 110112345555555 7434 5553334
Q ss_pred EEcccc
Q 017640 281 FGKSDL 286 (368)
Q Consensus 281 ~~~~~l 286 (368)
.+..++
T Consensus 305 ~I~~~l 310 (340)
T COG0552 305 SIAYEL 310 (340)
T ss_pred eHHHHh
Confidence 444444
No 400
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=79.29 E-value=43 Score=31.97 Aligned_cols=139 Identities=21% Similarity=0.309 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHH 216 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~ 216 (368)
=+..+..+...+ .+.+ .|++.+.+-... .++.-++++|+....+.+-. ..+++++.+.+.+ ++.++++.+
T Consensus 106 KSTLLLQva~~l----A~~~-~vLYVsGEES~~--QiklRA~RL~~~~~~l~l~a--Et~~e~I~~~l~~~~p~lvVIDS 176 (456)
T COG1066 106 KSTLLLQVAARL----AKRG-KVLYVSGEESLQ--QIKLRADRLGLPTNNLYLLA--ETNLEDIIAELEQEKPDLVVIDS 176 (456)
T ss_pred HHHHHHHHHHHH----HhcC-cEEEEeCCcCHH--HHHHHHHHhCCCccceEEeh--hcCHHHHHHHHHhcCCCEEEEec
Confidence 344455555555 4455 555555444332 46666778885332111111 1278888887765 788988888
Q ss_pred ccccc--------ccccC----HHHHHHHHHhcCCEEEE------ecCCcCCcc---ccc----CC-CCCccEEEecCcC
Q 017640 217 ISNML--------ASILP----IEEIVHWSHDVGAKVLV------DACQSVPHM---VVD----VQ-GLDADFLVASSHK 270 (368)
Q Consensus 217 ~~n~t--------G~~~~----l~~i~~l~~~~g~~li~------D~a~~~~~~---~~~----~~-~~~~d~~~~s~~K 270 (368)
+++.. |.+-- -.+|.++||+.|+.+++ |+.-+-+.. -+| ++ +.+..+-..-..|
T Consensus 177 IQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvLEHmVDtVlyFEGd~~~~~RiLR~vK 256 (456)
T COG1066 177 IQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVLEHMVDTVLYFEGDRHSRYRILRSVK 256 (456)
T ss_pred cceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchheeeeeeEEEEEeccCCCceeeeehhc
Confidence 87543 32211 35888999999976654 222221111 011 11 1134455566668
Q ss_pred -cCCCCc-ceEEEEccc
Q 017640 271 -MCGPTG-IGFLFGKSD 285 (368)
Q Consensus 271 -~~g~~G-~G~l~~~~~ 285 (368)
-||+.. +|++-+.++
T Consensus 257 NRFG~t~EiGvFeM~~~ 273 (456)
T COG1066 257 NRFGATNELGVFEMTEN 273 (456)
T ss_pred ccCCcccceeEEEEecC
Confidence 689888 888877664
No 401
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=77.64 E-value=40 Score=30.49 Aligned_cols=155 Identities=11% Similarity=0.055 Sum_probs=79.0
Q ss_pred EeccCCCCCCcHH-HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeC----------CH
Q 017640 70 YLDNAATSQKPIA-VLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTK----------NA 138 (368)
Q Consensus 70 ~l~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~----------g~ 138 (368)
.++.|.+...... ..+++..+++..+...+.. . -|+ ..+.+-+++++ -|.+.+ ++++|+ ..
T Consensus 16 ~iGlGt~~~~~~~~~~~av~~Al~~Gyr~IDTA-~--~Yg---nE~~VG~aI~~-s~v~Re-elFittKvw~~~~~~~~~ 87 (280)
T COG0656 16 AIGLGTWQIGDDEWAVRAVRAALELGYRLIDTA-E--IYG---NEEEVGEAIKE-SGVPRE-ELFITTKVWPSDLGYDET 87 (280)
T ss_pred CcceEeeecCCchhHHHHHHHHHHhCcceEecH-h--Hhc---CHHHHHHHHHh-cCCCHH-HeEEEeecCCccCCcchH
Confidence 3444444433332 7777777776532222211 1 111 33456667777 555543 777764 12
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCC---Cc---ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEE
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAE---HH---SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~---~~---s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v 212 (368)
-.+++..+.-+ .+.-=|-.++..|. +. .+..++..+.+..-++-+.|. | ++++.|+++++...-..
T Consensus 88 ~~a~e~Sl~rL---g~dyvDLyLiHwP~~~~~~~~~etw~alE~l~~~G~ir~IGVS---N--F~~~~L~~l~~~~~~~p 159 (280)
T COG0656 88 LKALEASLKRL---GLDYVDLYLIHWPVPNKYVVIEETWKALEELVDEGLIRAIGVS---N--FGVEHLEELLSLAKVKP 159 (280)
T ss_pred HHHHHHHHHHh---CCCceeEEEECCCCCccCccHHHHHHHHHHHHhcCCccEEEee---C--CCHHHHHHHHHhcCCCC
Confidence 23444444433 24445788888884 33 334444444333333444444 2 26788888776521112
Q ss_pred EEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 213 VIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
++..+. ..-..+-.++.++|++||+.+.
T Consensus 160 ~~NQIe--~hp~~~q~el~~~~~~~gI~v~ 187 (280)
T COG0656 160 AVNQIE--YHPYLRQPELLPFCQRHGIAVE 187 (280)
T ss_pred ceEEEE--eccCCCcHHHHHHHHHcCCEEE
Confidence 222221 1123456679999999998876
No 402
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=71.98 E-value=56 Score=31.83 Aligned_cols=111 Identities=7% Similarity=0.070 Sum_probs=66.6
Q ss_pred HHHHHHHcCCEEEEEeC--CC-----CCCCCHHHHHHhccc------CceEEEEcccccccccccCHHHHHHHHHhcC-C
Q 017640 174 WQLVAQKTGANLKFLNL--ND-----DESPDLDKLKEMLSR------KTKLVVIHHISNMLASILPIEEIVHWSHDVG-A 239 (368)
Q Consensus 174 ~~~~~~~~g~~v~~v~~--~~-----~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g-~ 239 (368)
..-+|+.+|+.-..+.. +. +|.+|...+++.|++ ++-+++-.-..+..|...-+-+|.++|++|. .
T Consensus 245 ~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eahakf 324 (838)
T KOG0630|consen 245 LHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHAKF 324 (838)
T ss_pred HHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhhhe
Confidence 44456777875333322 21 268999999988865 2344444455566787777999999999997 7
Q ss_pred EEEEecCCcCCcccc----cCC---CCCccEEEecCcCcCCCCcceEEEEccc
Q 017640 240 KVLVDACQSVPHMVV----DVQ---GLDADFLVASSHKMCGPTGIGFLFGKSD 285 (368)
Q Consensus 240 ~li~D~a~~~~~~~~----~~~---~~~~d~~~~s~~K~~g~~G~G~l~~~~~ 285 (368)
|++.-+ |++....+ +.. ....|.+.....-|+|.+..-++....-
T Consensus 325 WLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRP 376 (838)
T KOG0630|consen 325 WLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRP 376 (838)
T ss_pred eEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecc
Confidence 776543 33222211 000 0125566666667888777666655443
No 403
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=71.74 E-value=81 Score=28.80 Aligned_cols=100 Identities=15% Similarity=0.219 Sum_probs=57.5
Q ss_pred CcEEEeCCHHHHHHHHHHHccCCCCCCCC--EEEEc--CCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 130 GEIVFTKNATEAINLVAYSWGLSNLKSGD--EVILT--VAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~~~~~~~~~gd--~vl~~--~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
.+++.|.|.+.+...++... .++|. +|++. .|.+.+.. +....+..|+++..+. | .+....+
T Consensus 120 g~~IlTh~~S~~v~~~l~~A----~~~~k~~~V~VtESRP~~eG~~--~ak~L~~~gI~~~~I~-------D-sa~~~~~ 185 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTA----ADRGKRFKVIVTESRPRGEGRI--MAKELRQSGIPVTVIV-------D-SAVGAFM 185 (301)
T ss_pred CCEEEEecCcHHHHHHHHHh----hhcCCceEEEEEcCCCcchHHH--HHHHHHHcCCceEEEe-------c-hHHHHHH
Confidence 48899988777777777765 44554 45554 44444432 3333356688888776 2 2223333
Q ss_pred ccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEE
Q 017640 206 SRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~ 243 (368)
..-.++++=...-.-.|.++. --.|+..||++++++++
T Consensus 186 ~~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 186 SRVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred HhCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 332344443333333455555 45788889999987664
No 404
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=68.18 E-value=96 Score=28.25 Aligned_cols=101 Identities=18% Similarity=0.239 Sum_probs=60.7
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCC--EEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGD--EVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd--~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~ 206 (368)
+|++|.|.+-.+...+... .++|. .|++.+ |...+.. ....++ ..|++...++ | .++-+...
T Consensus 164 EviLT~g~SrTV~~FL~~A----~kk~Rkf~viVaE~~p~~qgH~-~Ak~la-~~giettVI~-------d-aaVfA~Ms 229 (353)
T KOG1465|consen 164 EVILTLGSSRTVENFLKHA----AKKGRKFRVIVAEGAPNNQGHE-LAKPLA-QAGIETTVIP-------D-AAVFAMMS 229 (353)
T ss_pred ceEEecCccHHHHHHHHHH----HhccCceEEEEeecCCcccchH-hhHHHH-HcCCeeEEec-------c-HHHHHHhh
Confidence 8999988887777777765 34433 355543 3333322 223333 4588877776 3 34444554
Q ss_pred cCceEEEEccccccccccc-C--HHHHHHHHHhcCCEEEEec
Q 017640 207 RKTKLVVIHHISNMLASIL-P--IEEIVHWSHDVGAKVLVDA 245 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~-~--l~~i~~l~~~~g~~li~D~ 245 (368)
.-.|+|+-++.--+.|.+. | ...++..||+|-+++++=+
T Consensus 230 rVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 230 RVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred hcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 4446666666555545443 3 6788888888988877643
No 405
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=67.04 E-value=68 Score=27.78 Aligned_cols=126 Identities=17% Similarity=0.234 Sum_probs=75.1
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEE-----EcCCC-----CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHH
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVI-----LTVAE-----HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDK 200 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl-----~~~~~-----~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~ 200 (368)
-+++-+|+..+...+..++ +.|-.|. .++.. |.-+.......++..|..++.........-.+++
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-----~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~ 77 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-----EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEE 77 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-----HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHH
Confidence 4567788888888887765 3443221 11111 1124445566677778888888776533335677
Q ss_pred HHHhccc-CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcccc----cCCCCCccEEEecCcCc
Q 017640 201 LKEMLSR-KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVV----DVQGLDADFLVASSHKM 271 (368)
Q Consensus 201 l~~~l~~-~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~~----~~~~~~~d~~~~s~~K~ 271 (368)
|.+++.. +...|+ +|.+.. ...+..+|++-|+.++.= -++.-+- ++-..+.++++.+.+|.
T Consensus 78 L~~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~P---LWg~d~~ell~e~~~~Gf~~~Iv~Vsa~ 146 (223)
T COG2102 78 LKEALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYAP---LWGRDPEELLEEMVEAGFEAIIVAVSAE 146 (223)
T ss_pred HHHHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEeec---ccCCCHHHHHHHHHHcCCeEEEEEEecc
Confidence 7777754 334554 566776 678889999999876631 1111111 11223677777777773
No 406
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=60.71 E-value=1.3e+02 Score=27.08 Aligned_cols=101 Identities=12% Similarity=0.137 Sum_probs=50.3
Q ss_pred CcEEEeCCHHHHHHHHHHHccCCCCCCC--CEEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 130 GEIVFTKNATEAINLVAYSWGLSNLKSG--DEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~~~~~~~~~g--d~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
.++++|-|-+..+..++... .+.| =+|++.+ |...+ ......+ ...|.++..++.. .+-..+
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a----~~~~~~~~V~v~es~P~~eG-~~~a~~L-~~~gi~v~~i~d~--------~~~~~m 173 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSA----KKKGKKFRVIVLESRPYNEG-RLMAKEL-AEAGIPVTLIPDS--------AVGYVM 173 (282)
T ss_dssp TEEEEEES--SHHHHHHHHH----HHTTEEEEEEEE--TTTTHH-HTHHHHH-HHTT-EEEEE-GG--------GHHHHH
T ss_pred CeEEEEeCCchHHHHHHHHH----HHcCCeEEEEEccCCcchhh-hhHHHHh-hhcceeEEEEech--------HHHHHH
Confidence 47888877777766666654 2333 2455543 32223 2233333 4468999888732 233333
Q ss_pred ccCc-eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEe
Q 017640 206 SRKT-KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 206 ~~~~-~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D 244 (368)
..+. ++++=...-...|.+.. -..++-.|+++++++++=
T Consensus 174 ~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 174 PRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp HCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred HHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 2213 44443333344554444 457777889999877654
No 407
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=59.59 E-value=68 Score=31.71 Aligned_cols=71 Identities=20% Similarity=0.240 Sum_probs=49.1
Q ss_pred HHHHHHcC-CEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhc--CCEEEEecCCcC
Q 017640 175 QLVAQKTG-ANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLVDACQSV 249 (368)
Q Consensus 175 ~~~~~~~g-~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--g~~li~D~a~~~ 249 (368)
....+..| .++..++... ..++.+++.+.+.. ++.+|.++.. |.......++++.+|+. ++.+++=+.|..
T Consensus 29 Aa~L~~~G~~~V~iiD~~~-~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 29 GGALLDAGYHDVTFLDAMT-GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred HHHHHhcCCcceEEecccc-cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 33445668 5888876542 34466777776654 7888888654 33444567888888886 899999988864
No 408
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=57.21 E-value=71 Score=29.32 Aligned_cols=38 Identities=24% Similarity=0.238 Sum_probs=28.1
Q ss_pred eEEEEcccccccccccC-HHHHHHHHHhcCCEEEEecCCc
Q 017640 210 KLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~-l~~i~~l~~~~g~~li~D~a~~ 248 (368)
.+|++ +.+=|.|.-.+ ..+|.++|++.|+.+++|....
T Consensus 131 d~Vvl-sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 131 DIVVL-SGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CEEEE-eCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 34444 34456666555 7899999999999999999843
No 409
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=57.20 E-value=74 Score=30.62 Aligned_cols=15 Identities=20% Similarity=0.368 Sum_probs=7.6
Q ss_pred CCCCEEEEcCCCCcc
Q 017640 155 KSGDEVILTVAEHHS 169 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s 169 (368)
+.|..|++.+.+.+.
T Consensus 221 ~~g~~v~~fSlEm~~ 235 (421)
T TIGR03600 221 REGKPVLFFSLEMSA 235 (421)
T ss_pred hCCCcEEEEECCCCH
Confidence 345555555555444
No 410
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=54.84 E-value=22 Score=31.47 Aligned_cols=27 Identities=22% Similarity=0.430 Sum_probs=22.9
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
|.....+++.++.+++++-+++|++|-
T Consensus 50 ~G~l~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 50 GGFLGAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred cCcCCHHHHHHHHHHcCCCEEEECCCh
Confidence 334557899999999999999999975
No 411
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=54.60 E-value=84 Score=23.08 Aligned_cols=69 Identities=10% Similarity=0.179 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCH--HHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDL--DKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~--~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
....++..++..|.+.+.. ..++.... ..|+..+..---+|+++..-+- --...+.+.|+++|++++.=
T Consensus 11 ~~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH----~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 11 RERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKKADLVIVFTDYVSH----NAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred cHHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCCCCEEEEEeCCcCh----HHHHHHHHHHHHcCCcEEEE
Confidence 4456788888899998888 22222222 3477777543344444444221 12677888999999887753
No 412
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=53.56 E-value=31 Score=30.09 Aligned_cols=69 Identities=10% Similarity=0.276 Sum_probs=46.1
Q ss_pred cHHHHHHHHHHcCCEEEEE-eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 170 AIVPWQLVAQKTGANLKFL-NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v-~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
....+...++..|.++..+ +...+..--.+.++.++..++..|++...... ...++.+-|++.|++++.
T Consensus 16 ~~~g~~~~a~~~g~~~~~~~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 16 VIKGAKAAAKELGYEVEIVFDAQNDPEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHHHHHTCEEEEEEESTTTHHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCCCHHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhcCceEEE
Confidence 4456777888899999886 43333222345567777778888887765332 244666778899998775
No 413
>KOG1577 consensus Aldo/keto reductase family proteins [General function prediction only]
Probab=53.53 E-value=1.8e+02 Score=26.60 Aligned_cols=163 Identities=13% Similarity=0.109 Sum_probs=76.0
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCC----------
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKN---------- 137 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g---------- 137 (368)
+--++-|+....+..+.+++..++...+...+. .+.++. ..+.-+.+++.+++. ++.. +++++|+=
T Consensus 15 mP~iGlGTw~~~~~~~~~aV~~Al~~GYRHIDt-A~~Y~N-E~evG~aik~~i~~~-~v~R-ediFiTSKlw~~~~~~~~ 90 (300)
T KOG1577|consen 15 MPIIGLGTWQSPPGQVAEAVKAAIKAGYRHIDT-AHVYGN-EKEVGEAIKELLAEG-GVKR-EDIFITSKLWPTDHAPEL 90 (300)
T ss_pred cceeeeEecccChhhHHHHHHHHHHhCcceeec-hhhhCC-hHHHHHHHHHHhhhC-Ccch-hhheeeeccCccccChhh
Confidence 334444445555677888888887754322221 111111 122223344444333 5555 37777751
Q ss_pred HHHHHHHHHHHccCC---------C--C------CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHH
Q 017640 138 ATEAINLVAYSWGLS---------N--L------KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDK 200 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~---------~--~------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~ 200 (368)
...|++..+.-+... + . +....+.+....+..+...+..+....-++-+.|.. + ....
T Consensus 91 v~~al~~sLk~L~ldYvDLyLiH~P~~~k~~~~~~~~~~~~~~~~~~~~tW~amE~~~~~Gl~rsIGVSN---F--~~~~ 165 (300)
T KOG1577|consen 91 VEKALEKSLKKLQLDYVDLYLIHWPVAFKDSFPKDENGKVNYDDVDRIETWKAMEKLVDEGLVRSIGVSN---F--NIKQ 165 (300)
T ss_pred HHHHHHHHHHHhChhhhheeeEecccccCCCCCcccccccccccchHHHHHHHHHHHHHcCCceEeeeec---C--CHHH
Confidence 223555555554210 0 0 011233333334444555555543333334444442 2 4566
Q ss_pred HHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 201 LKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 201 l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
|++.+.. +++=.+-.--..| .++-++|.++|+++|+.+-
T Consensus 166 le~ll~~~ki~P~vnQvE~HP---~~~Q~~L~~fCk~~~I~v~ 205 (300)
T KOG1577|consen 166 LEELLNLAKIKPAVNQVECHP---YLQQKKLVEFCKSKGIVVT 205 (300)
T ss_pred HHHHHhcCCCCCccceeeccC---CcChHHHHHHHhhCCcEEE
Confidence 7776643 2111111111122 3557889999999998765
No 414
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=52.80 E-value=99 Score=26.83 Aligned_cols=50 Identities=16% Similarity=0.179 Sum_probs=31.4
Q ss_pred CCCCHHHHHHhccc-----CceEEEEcccccccccc--cC--------HHHHHHHHHhcCCEEEE
Q 017640 194 ESPDLDKLKEMLSR-----KTKLVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 194 ~~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~g~~li~ 243 (368)
..+++++|++.+.. ++++|++.+.+...... .+ ++.|.++|+++|+.+++
T Consensus 104 ~~~~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 104 SSLTVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 34577777766532 67888888876542111 11 45677788889876654
No 415
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=52.16 E-value=29 Score=28.68 Aligned_cols=51 Identities=25% Similarity=0.348 Sum_probs=40.0
Q ss_pred CHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC--CEEEEecCCcCCcc
Q 017640 197 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHM 252 (368)
Q Consensus 197 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g--~~li~D~a~~~~~~ 252 (368)
|..+++++++.+...+++- +|.+..++++.+..+++| +++++|-+.+++.-
T Consensus 12 ~~~~le~~les~~~~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~~~ 64 (181)
T COG1954 12 DNKDLEKALESESQYVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLSND 64 (181)
T ss_pred hHHHHHHHhcCCCeEEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccCCc
Confidence 5677888888777655542 567889999999999987 78889999887644
No 416
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=50.83 E-value=1.6e+02 Score=25.26 Aligned_cols=59 Identities=17% Similarity=0.216 Sum_probs=36.5
Q ss_pred HHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 179 QKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 179 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
+..|++++..+.+ |.+.|.++++.-..++++....++ ....-...+++.|++.|+..++
T Consensus 41 ~~~g~~vv~~d~~-----~~~~l~~al~g~d~v~~~~~~~~~-~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 41 QALGAEVVEADYD-----DPESLVAALKGVDAVFSVTPPSHP-SELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHTTTEEEES-TT------HHHHHHHHTTCSEEEEESSCSCC-CHHHHHHHHHHHHHHHT-SEEE
T ss_pred hcccceEeecccC-----CHHHHHHHHcCCceEEeecCcchh-hhhhhhhhHHHhhhccccceEE
Confidence 4568988877665 899999999765455555444331 1111256788889998875554
No 417
>COG1587 HemD Uroporphyrinogen-III synthase [Coenzyme metabolism]
Probab=50.71 E-value=79 Score=27.88 Aligned_cols=127 Identities=17% Similarity=0.172 Sum_probs=66.4
Q ss_pred CcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc
Q 017640 130 GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT 209 (368)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~ 209 (368)
+.|+||+. .|...+...+ ...+-. .........+-..-...++..|.++..+|.+.+..-.++.+........
T Consensus 52 d~vvfTS~--~av~~~~~~l----~~~~~~-~~~~~~i~aVG~~Ta~~l~~~G~~~~~~p~~~~~~~l~~~l~~~~~~~~ 124 (248)
T COG1587 52 DWVVFTSP--NAVRFFFEAL----KEQGLD-ALKNKKIAAVGEKTAEALRKLGIKVDFIPEDGDSEGLLEELPELLKGGK 124 (248)
T ss_pred CEEEEECH--HHHHHHHHHH----Hhhccc-ccccCeEEEEcHHHHHHHHHhCCCCCcCCCccchHHHHHHhhhhccCCC
Confidence 37888865 3566666555 222211 2223333333344566677889998888753222112233333322223
Q ss_pred eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-------CCCCCccEEEecCcC
Q 017640 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-------VQGLDADFLVASSHK 270 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-------~~~~~~d~~~~s~~K 270 (368)
+++++-+.. |. +.|.+-...+|+-+..=.+|-.-....+ ....+.|.++++.+.
T Consensus 125 ~vl~~~~~~---~r----~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~~~~~~~~~~~~d~v~ftS~~ 185 (248)
T COG1587 125 RVLILRGNG---GR----EVLEEKLEERGAEVREVEVYRTEPPPLDEATLIELLKLGEVDAVVFTSSS 185 (248)
T ss_pred eEEEEcCCC---ch----HHHHHHHHhCCCEEEEEeeeeecCCCccHHHHHHHHHhCCCCEEEEeCHH
Confidence 555554432 11 5666777888887776556553322223 223367888776655
No 418
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=50.59 E-value=24 Score=27.66 Aligned_cols=38 Identities=13% Similarity=0.271 Sum_probs=24.5
Q ss_pred HHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
.+++.+..++-+++++... .+-+++.++|+++++.++.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 4566666788888888763 4578999999999998874
No 419
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=50.24 E-value=32 Score=32.63 Aligned_cols=84 Identities=17% Similarity=0.294 Sum_probs=49.6
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCC-CHHHHHHhcc---cCceEEEEcccccccccccCHHHHHHH
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESP-DLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHW 233 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~-d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l 233 (368)
+.-++..+.++.+.. .+.+++ .-++..++..+.+.. +.+.|.+.+. ++..+++++.. --|...+.+++.++
T Consensus 92 ~~~l~~~~~r~T~~K-~Rv~s~--nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY--~KG~L~~~q~~I~~ 166 (467)
T COG2870 92 DSDLLRDKNRPTIVK-LRVLSR--NQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALVLSDY--AKGVLTNVQKMIDL 166 (467)
T ss_pred ccceEeecCCCceee-eeeecc--cceEEEecccccCcchhHHHHHHHHHHHhhcCCEEEEecc--ccccchhHHHHHHH
Confidence 344566666665432 222211 224555554433332 3333433333 24567777664 36778889999999
Q ss_pred HHhcCCEEEEecC
Q 017640 234 SHDVGAKVLVDAC 246 (368)
Q Consensus 234 ~~~~g~~li~D~a 246 (368)
||++|+++++|--
T Consensus 167 ar~~~~pVLvDPK 179 (467)
T COG2870 167 AREAGIPVLVDPK 179 (467)
T ss_pred HHHcCCcEEECCC
Confidence 9999999999954
No 420
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=50.08 E-value=7.1 Score=32.52 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=37.4
Q ss_pred CHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC--CEEEEecCCcCCcc
Q 017640 197 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHM 252 (368)
Q Consensus 197 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g--~~li~D~a~~~~~~ 252 (368)
+.++|+.+++.+...|++- +|.+..++++.+.++++| +++++|-+.+++.-
T Consensus 8 ~~~~l~~al~s~~~~vfLl-----~g~I~~l~~~v~~~~~~gK~vfVHiDli~Gl~~D 60 (175)
T PF04309_consen 8 DEEDLEKALESDVEVVFLL-----TGDIGNLKDIVKRLKAAGKKVFVHIDLIEGLSRD 60 (175)
T ss_dssp CCCCCCCCCCSSSSEEEE------SEECCCHHHHHHHHHHTT-EEEEECCGEETB-SS
T ss_pred CHHHHHHHHcCCCCEEEEE-----cCcHHHHHHHHHHHHHcCCEEEEEehhcCCCCCC
Confidence 3455667777666766665 367888999999999998 67788888886654
No 421
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=49.91 E-value=1.2e+02 Score=23.32 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=21.4
Q ss_pred cccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 205 LSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 205 l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
+.++..+|+++. +|....+.++++.|+++|+.++
T Consensus 58 ~~~~~~~i~iS~----~g~~~~~~~~~~~a~~~g~~iv 91 (139)
T cd05013 58 LTPGDVVIAISF----SGETKETVEAAEIAKERGAKVI 91 (139)
T ss_pred CCCCCEEEEEeC----CCCCHHHHHHHHHHHHcCCeEE
Confidence 344555555655 3444557778888999986543
No 422
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=49.88 E-value=1.8e+02 Score=25.59 Aligned_cols=99 Identities=13% Similarity=0.082 Sum_probs=62.9
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe-CC--CC---CCCCHHHHHHhcc----
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN-LN--DD---ESPDLDKLKEMLS---- 206 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~-~~--~~---~~~d~~~l~~~l~---- 206 (368)
....|+..+++.++ =.+|.+.+|.-..+........+..|.++..+. ++ .+ +.++++.+.+++.
T Consensus 106 t~~~A~~~AL~alg------~~RIalvTPY~~~v~~~~~~~l~~~G~eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~ 179 (239)
T TIGR02990 106 TPSSAAVDGLAALG------VRRISLLTPYTPETSRPMAQYFAVRGFEIVNFTCLGLTDDREMARISPDCIVEAALAAFD 179 (239)
T ss_pred CHHHHHHHHHHHcC------CCEEEEECCCcHHHHHHHHHHHHhCCcEEeeeeccCCCCCceeeecCHHHHHHHHHHhcC
Confidence 33457888888762 247888888666677777888888899987662 22 22 4678888877764
Q ss_pred cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
++..+|+++ ++|. -.++-|.++=++.|.+|+ +..+
T Consensus 180 ~~aDAifis-CTnL----rt~~vi~~lE~~lGkPVl-sSNq 214 (239)
T TIGR02990 180 PDADALFLS-CTAL----RAATCAQRIEQAIGKPVV-TSNQ 214 (239)
T ss_pred CCCCEEEEe-CCCc----hhHHHHHHHHHHHCCCEE-EHHH
Confidence 356677766 3332 124444444456788775 4443
No 423
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=48.58 E-value=1e+02 Score=24.19 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=32.1
Q ss_pred cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccc
Q 017640 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNM 220 (368)
Q Consensus 168 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~ 220 (368)
.++...+...++..|.+++...+-+| |.+.+++.+.. +..+|+++....+
T Consensus 17 d~~~~~l~~~l~~~G~~~~~~~~v~D---d~~~I~~~l~~~~~~~dliittGG~g~ 69 (135)
T smart00852 17 DSNGPALAELLTELGIEVTRYVIVPD---DKEAIKEALREALERADLVITTGGTGP 69 (135)
T ss_pred cCcHHHHHHHHHHCCCeEEEEEEeCC---CHHHHHHHHHHHHhCCCEEEEcCCCCC
Confidence 34555677778889998776655443 56666665532 4567777766553
No 424
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=47.54 E-value=58 Score=30.52 Aligned_cols=125 Identities=7% Similarity=0.038 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+.++ +.+.+++-+|.+ ++-+.-....+..+... -|.+.+.+-+-.. +. +...+...| +++.+.
T Consensus 151 ~~gl~-~L~~~~~e~Gl~----~~tev~d~~~v~~~~~~--------~d~lqIga~~~~n-~~-LL~~va~t~-kPVllk 214 (352)
T PRK13396 151 ESALE-LLAAAREATGLG----IITEVMDAADLEKIAEV--------ADVIQVGARNMQN-FS-LLKKVGAQD-KPVLLK 214 (352)
T ss_pred HHHHH-HHHHHHHHcCCc----EEEeeCCHHHHHHHHhh--------CCeEEECcccccC-HH-HHHHHHccC-CeEEEe
Confidence 34443 334566777875 23333334556666542 2556665543332 22 333333333 344444
Q ss_pred CCCCCCCCHHHHHHhccc-----CceEEEEccc----c-cccccccCHHHHHHHHHhcCCEEEEecCCcCCcc
Q 017640 190 LNDDESPDLDKLKEMLSR-----KTKLVVIHHI----S-NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM 252 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~-----~~~~v~~~~~----~-n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~ 252 (368)
. .-..+++++..+++. +..++++... . ..+-...++..|..+-+..++.+|+|.+|+.|..
T Consensus 215 ~--G~~~t~ee~~~A~e~i~~~Gn~~viL~erG~rtf~s~y~~~~~dl~ai~~lk~~~~lPVi~DpsH~~G~s 285 (352)
T PRK13396 215 R--GMAATIDEWLMAAEYILAAGNPNVILCERGIRTFDRQYTRNTLDLSVIPVLRSLTHLPIMIDPSHGTGKS 285 (352)
T ss_pred C--CCCCCHHHHHHHHHHHHHcCCCeEEEEecCCccCcCCCCCCCcCHHHHHHHHHhhCCCEEECCcccCCcH
Confidence 2 223367776665532 3344443331 1 2223556789998887777999999999998754
No 425
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=47.51 E-value=1.7e+02 Score=26.86 Aligned_cols=119 Identities=16% Similarity=0.073 Sum_probs=65.7
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCC--CcccHHHHHHHHHHcCCEEEEEeCCCCC--CCCHHHHHHhcc
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAE--HHSAIVPWQLVAQKTGANLKFLNLNDDE--SPDLDKLKEMLS 206 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~--~~s~~~~~~~~~~~~g~~v~~v~~~~~~--~~d~~~l~~~l~ 206 (368)
+-++|-|+.+++..-.-+.....+.=.-..++..+. |..+ .-....+..|++++.++...+. ....+.+.+-++
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~n--gn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~ 142 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLN--GNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVR 142 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccc--cchhhhhhcCceEEEecCCCChhhchhhHHHHHHHH
Confidence 568888887777665544321112112233333332 1111 1223345669999999876665 334455555444
Q ss_pred c--CceEEEEccccccc---ccccCHHHHHHHHHh-cCCEEEEecCCcCCc
Q 017640 207 R--KTKLVVIHHISNML---ASILPIEEIVHWSHD-VGAKVLVDACQSVPH 251 (368)
Q Consensus 207 ~--~~~~v~~~~~~n~t---G~~~~l~~i~~l~~~-~g~~li~D~a~~~~~ 251 (368)
+ +...++.....||. |.+--..||.+.+++ -.+-.+|.++-+.|+
T Consensus 143 ~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~gT 193 (323)
T COG2515 143 KQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSGGT 193 (323)
T ss_pred hcCCCCcEeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCcch
Confidence 3 33456666667884 444446788888887 345556666655544
No 426
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=47.31 E-value=1.9e+02 Score=27.98 Aligned_cols=128 Identities=14% Similarity=0.200 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHcCCCC---------CCcEEEeCC-----H-HHHHHHHHHHccCCCCCCCCEEEEcCCC-Cc-ccHHH
Q 017640 111 DEYELARKKVAAFINASD---------SGEIVFTKN-----A-TEAINLVAYSWGLSNLKSGDEVILTVAE-HH-SAIVP 173 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~---------~~~v~~t~g-----~-t~a~~~~~~~~~~~~~~~gd~vl~~~~~-~~-s~~~~ 173 (368)
.....+.+.+.++++... + .+++..| = |.+..++.... .+.|..|++.+.+ |- +....
T Consensus 72 ~~~~~v~~eL~~~l~~~~~~~~~~~~~p-~vi~~vG~~GsGKTTtaakLA~~l~----~~~g~kV~lV~~D~~R~~a~~Q 146 (428)
T TIGR00959 72 QFIKIVHEELVAILGGENASLNLAKKPP-TVILMVGLQGSGKTTTCGKLAYYLK----KKQGKKVLLVACDLYRPAAIEQ 146 (428)
T ss_pred HHHHHHHHHHHHHhCCCCcccccCCCCC-EEEEEECCCCCcHHHHHHHHHHHHH----HhCCCeEEEEeccccchHHHHH
Confidence 355567777777776431 2 3443322 2 33444444321 2345555444433 32 33444
Q ss_pred HHHHHHHcCCEEEEEeCCCCCCCCHHHH-----HHhcccCceEEEEccccccc---ccccCHHHHHHHHHhcCCEEEEec
Q 017640 174 WQLVAQKTGANLKFLNLNDDESPDLDKL-----KEMLSRKTKLVVIHHISNML---ASILPIEEIVHWSHDVGAKVLVDA 245 (368)
Q Consensus 174 ~~~~~~~~g~~v~~v~~~~~~~~d~~~l-----~~~l~~~~~~v~~~~~~n~t---G~~~~l~~i~~l~~~~g~~li~D~ 245 (368)
+..+++..|..+...+.. .++..+ +.+...+..+|++..+.... .....+.++.+.++..++++++|+
T Consensus 147 L~~~a~~~gvp~~~~~~~----~~P~~i~~~al~~~~~~~~DvVIIDTaGr~~~d~~l~~eL~~i~~~~~p~e~lLVvda 222 (428)
T TIGR00959 147 LKVLGQQVGVPVFALGKG----QSPVEIARRALEYAKENGFDVVIVDTAGRLQIDEELMEELAAIKEILNPDEILLVVDA 222 (428)
T ss_pred HHHHHHhcCCceEecCCC----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccccCHHHHHHHHHHHHhhCCceEEEEEec
Confidence 556666667665543321 144333 33333455678887764221 011113344444446688999997
Q ss_pred CC
Q 017640 246 CQ 247 (368)
Q Consensus 246 a~ 247 (368)
..
T Consensus 223 ~t 224 (428)
T TIGR00959 223 MT 224 (428)
T ss_pred cc
Confidence 64
No 427
>PF05378 Hydant_A_N: Hydantoinase/oxoprolinase N-terminal region; InterPro: IPR008040 This domain is found at the N terminus of the hydantoinase/oxoprolinase IPR002821 from INTERPRO family.
Probab=46.02 E-value=1.7e+02 Score=24.27 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=26.6
Q ss_pred CCCHHHHHHhccc----CceEEEEcccccccccccC--HHHHHHHHHhcC
Q 017640 195 SPDLDKLKEMLSR----KTKLVVIHHISNMLASILP--IEEIVHWSHDVG 238 (368)
Q Consensus 195 ~~d~~~l~~~l~~----~~~~v~~~~~~n~tG~~~~--l~~i~~l~~~~g 238 (368)
.+|.+++++.+.. ....|+++..+++ ..| =+++.+++++.|
T Consensus 130 ~ld~~~v~~~~~~l~~~gv~avAV~~~fS~---~np~hE~~v~eii~e~g 176 (176)
T PF05378_consen 130 PLDEDEVREALRELKDKGVEAVAVSLLFSY---RNPEHEQRVAEIIREEG 176 (176)
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEEECccCC---CCHHHHHHHHHHHHhcC
Confidence 4577888777643 4677777777555 345 346677777765
No 428
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=45.91 E-value=88 Score=24.38 Aligned_cols=56 Identities=9% Similarity=0.164 Sum_probs=37.2
Q ss_pred CEEEEEeCCCCCCCCHHHHHHhcccCceEEEE--c---ccccccccccC---HHHHHHHHHhcC
Q 017640 183 ANLKFLNLNDDESPDLDKLKEMLSRKTKLVVI--H---HISNMLASILP---IEEIVHWSHDVG 238 (368)
Q Consensus 183 ~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~--~---~~~n~tG~~~~---l~~i~~l~~~~g 238 (368)
..++.|++.-.|.+|+..+..++......|++ | .++...|...- ++.+.++.++.|
T Consensus 27 ~~vriIrvpC~Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 27 PNVRIIRVPCSGRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred CCeEEEEccCCCccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 34666666678999999999999887666655 2 33456666655 445555555555
No 429
>PTZ00081 enolase; Provisional
Probab=45.45 E-value=1.9e+02 Score=28.12 Aligned_cols=101 Identities=13% Similarity=0.143 Sum_probs=65.7
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++.+.+......+ ++=+.+++.+|-+...+..|..+.+..|-++. +-.++...-++..++..++.+..=++..-
T Consensus 282 s~~eli~~~~~~l-----~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~-IvgDE~~~tn~~~l~~~I~~~aad~i~iK 355 (439)
T PTZ00081 282 TGEELVELYLDLV-----KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQ-IVGDDLLVTNPTRIKKAIEKKACNALLLK 355 (439)
T ss_pred CHHHHHHHHHHHH-----hcCCcEEEEcCCCcccHHHHHHHHHhhCCCce-EEcCCcccCCHHHHHHHHHhCCCCEEEec
Confidence 4455555555543 33346788899888888889998887753432 22333333468888888876543223222
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
+ |..|.+....+++++|+++|+.+++=
T Consensus 356 v-nqiGGITe~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 356 V-NQIGTVTEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred c-ccccCHHHHHHHHHHHHHcCCcEEEe
Confidence 2 34566777888999999999887763
No 430
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=45.10 E-value=1e+02 Score=22.89 Aligned_cols=50 Identities=14% Similarity=0.251 Sum_probs=33.7
Q ss_pred CEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 183 ANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 183 ~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
..++.++.+ ..+.+..++....++++++. ...|-+++.++|+++++.++.
T Consensus 41 ~~lvIt~gd-----R~di~~~a~~~~i~~iIltg------~~~~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 41 GDLVITPGD-----REDIQLAAIEAGIACIILTG------GLEPSEEVLELAKELGIPVIS 90 (105)
T ss_dssp TEEEEEETT------HHHHHHHCCTTECEEEEET------T----HHHHHHHHHHT-EEEE
T ss_pred CeEEEEeCC-----cHHHHHHHHHhCCCEEEEeC------CCCCCHHHHHHHHHCCCEEEE
Confidence 456666655 56777788888888888764 456678999999999988874
No 431
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=44.76 E-value=1.7e+02 Score=27.28 Aligned_cols=72 Identities=15% Similarity=0.259 Sum_probs=40.3
Q ss_pred CCCHHHHHHhcccCceEEEEc-------ccccccccccC----HHHHHHHHHhcCCEEEEecCCcCC-cccccCCCCCcc
Q 017640 195 SPDLDKLKEMLSRKTKLVVIH-------HISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVP-HMVVDVQGLDAD 262 (368)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~-------~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~-~~~~~~~~~~~d 262 (368)
-.+.+..++++......|.+. ...-.+|.-.| +.++++.++++++.+|.|+---.+ .+--.+ ..+.|
T Consensus 158 V~T~e~a~~Li~aGAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KAL-A~GAd 236 (343)
T TIGR01305 158 VVTGEMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAF-GAGAD 236 (343)
T ss_pred ccCHHHHHHHHHcCCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHH-HcCCC
Confidence 346777777776655444433 22234455545 456666666778999999864322 111111 24666
Q ss_pred EEEec
Q 017640 263 FLVAS 267 (368)
Q Consensus 263 ~~~~s 267 (368)
++..+
T Consensus 237 ~VMlG 241 (343)
T TIGR01305 237 FVMLG 241 (343)
T ss_pred EEEEC
Confidence 66655
No 432
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=44.68 E-value=2.2e+02 Score=25.33 Aligned_cols=78 Identities=23% Similarity=0.322 Sum_probs=41.6
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCE-------EEEEeCCCCCCCCHHHHHHhcc--------cCceEEEEccccccccc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGAN-------LKFLNLNDDESPDLDKLKEMLS--------RKTKLVVIHHISNMLAS 223 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~-------v~~v~~~~~~~~d~~~l~~~l~--------~~~~~v~~~~~~n~tG~ 223 (368)
.|++.+....+ ..-+..++++.+.+ +...... +.+++.+.+. .+.++|++.+...+.-.
T Consensus 75 vvyidTe~~f~-~~Rl~~i~~~~~~~~~~~l~~I~v~~~~-----~~~~l~~~L~~l~~~l~~~~ikLIVIDSIaalfr~ 148 (256)
T PF08423_consen 75 VVYIDTEGTFS-PERLQQIAERFGLDPEEILDNIFVIRVF-----DLEELLELLEQLPKLLSESKIKLIVIDSIAALFRS 148 (256)
T ss_dssp EEEEESSSSS--HHHHHHHHHHTTS-HHHHHHTEEEEE-S-----SHHHHHHHHHHHHHHHHHSCEEEEEEETSSHHHHH
T ss_pred eEEEeCCCCCC-HHHHHHHhhccccccchhhhceeeeecC-----CHHHHHHHHHHHHhhccccceEEEEecchHHHHHH
Confidence 44444444333 33466666665532 2333322 5555544442 36899999999876422
Q ss_pred cc----C-----------HHHHHHHHHhcCCEEE
Q 017640 224 IL----P-----------IEEIVHWSHDVGAKVL 242 (368)
Q Consensus 224 ~~----~-----------l~~i~~l~~~~g~~li 242 (368)
.+ + +..|..+|++|++.|+
T Consensus 149 e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVv 182 (256)
T PF08423_consen 149 EFSGRGDLAERQRMLARLARILKRLARKYNIAVV 182 (256)
T ss_dssp HSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEE
T ss_pred HHccchhhHHHHHHHHHHHHHHHHHHHhCCceEE
Confidence 11 1 2357778889997655
No 433
>smart00642 Aamy Alpha-amylase domain.
Probab=44.57 E-value=22 Score=29.35 Aligned_cols=29 Identities=24% Similarity=0.412 Sum_probs=24.7
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
..|..-+++++++.||++|+.|++|-+..
T Consensus 65 ~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 65 RFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 45777779999999999999999998843
No 434
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=44.37 E-value=90 Score=24.47 Aligned_cols=51 Identities=14% Similarity=0.211 Sum_probs=33.5
Q ss_pred cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEccccccc
Q 017640 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNML 221 (368)
Q Consensus 168 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~t 221 (368)
.++...+....+..|.++....+-+| |.+.+++++.. +..+|+++....++
T Consensus 18 d~n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~i~~~~~~~DlvittGG~g~g 71 (133)
T cd00758 18 DTNGPALEALLEDLGCEVIYAGVVPD---DADSIRAALIEASREADLVLTTGGTGVG 71 (133)
T ss_pred EchHHHHHHHHHHCCCEEEEeeecCC---CHHHHHHHHHHHHhcCCEEEECCCCCCC
Confidence 34555677778888999888766555 55666655532 36778877765544
No 435
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=44.22 E-value=1.4e+02 Score=27.06 Aligned_cols=81 Identities=21% Similarity=0.306 Sum_probs=50.7
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG 238 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g 238 (368)
..+..-| +++..+.+.+..+++...+-+.+-+ -.+++.++++...++|++-.-+-| +.|.-++.+.+++.|
T Consensus 46 ~~~~g~P----Vf~tV~EA~~~~~a~~svI~Vp~~~--aadai~EAida~i~liv~ITEgIP---~~D~~~~~~~a~~~g 116 (293)
T COG0074 46 QTILGLP----VFNTVEEAVKETGANASVIFVPPPF--AADAILEAIDAGIKLVVIITEGIP---VLDMLELKRYAREKG 116 (293)
T ss_pred eEEcCcc----HHHHHHHHHHhhCCCEEEEecCcHH--HHHHHHHHHhCCCcEEEEEeCCCC---HHHHHHHHHHHHhcC
Confidence 4555566 7777888888877765444433333 356677777776665554443333 245667778888899
Q ss_pred CEEEEecCCc
Q 017640 239 AKVLVDACQS 248 (368)
Q Consensus 239 ~~li~D~a~~ 248 (368)
..++==.+.+
T Consensus 117 ~~iiGPncpG 126 (293)
T COG0074 117 TRLIGPNCPG 126 (293)
T ss_pred CEEECCCCCc
Confidence 8887555543
No 436
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=43.48 E-value=27 Score=29.64 Aligned_cols=32 Identities=22% Similarity=0.293 Sum_probs=26.8
Q ss_pred EEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 211 LVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
+.++|-..|..|.....+++.++|++||+.++
T Consensus 158 a~VicEi~~~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 158 AGVICEIMNDDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred cEEEEEEeCCCccccChHHHHHHHHHcCCcEE
Confidence 44555566779999999999999999998876
No 437
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=43.42 E-value=65 Score=28.53 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=28.5
Q ss_pred CCHHHHHHhcc------cCceEEEEcccccccccc--cC--------HHHHHHHHHhcCCEEEE
Q 017640 196 PDLDKLKEMLS------RKTKLVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 196 ~d~~~l~~~l~------~~~~~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~g~~li~ 243 (368)
.++++|++.+. .+..+|++.+.+-..... .+ .++|.++|+++++.|++
T Consensus 112 ~~~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 112 LTIDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp -BHHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred CCHHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 46677766553 245677777766443321 11 34677777888887775
No 438
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=43.35 E-value=2.6e+02 Score=25.56 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=50.5
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
++++|.|.+.....++.... .-++.-.|++.+ |...+ ....+.+ ...|+++..++.. .+-..+.+-
T Consensus 117 ~~ILT~~~S~tv~~~l~~a~--~~~~~f~V~v~EsrP~~~G-~~~a~~L-~~~gI~vtlI~Ds--------a~~~~m~~v 184 (301)
T TIGR00511 117 DVVMTHCNSEAALSVIKTAF--EQGKDIEVIATETRPRKQG-HITAKEL-RDYGIPVTLIVDS--------AVRYFMKEV 184 (301)
T ss_pred CEEEEECCcHHHHHHHHHHH--HcCCcEEEEEecCCCcchH-HHHHHHH-HHCCCCEEEEehh--------HHHHHHHhC
Confidence 67888655444444444331 112223455553 33333 3333333 4568888888732 222223222
Q ss_pred ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEE
Q 017640 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~ 243 (368)
.++++=...-...|.+.. --.++-.|+.|++++++
T Consensus 185 d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 185 DHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 233332222333454444 45777888999987775
No 439
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=43.10 E-value=86 Score=27.83 Aligned_cols=124 Identities=9% Similarity=0.051 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+.++.+++ .++-+|.+ ++-+.-..+.+..+.... |.+.+.+-+-.. +. +...+...| +++.+..
T Consensus 66 ~gl~~L~~-~~~~~Gl~----~~Tev~d~~~v~~~~e~v--------dilqIgs~~~~n-~~-LL~~va~tg-kPVilk~ 129 (250)
T PRK13397 66 QGIRYLHE-VCQEFGLL----SVSEIMSERQLEEAYDYL--------DVIQVGARNMQN-FE-FLKTLSHID-KPILFKR 129 (250)
T ss_pred HHHHHHHH-HHHHcCCC----EEEeeCCHHHHHHHHhcC--------CEEEECcccccC-HH-HHHHHHccC-CeEEEeC
Confidence 45544443 46777875 222233344556655422 344554432222 22 333333333 3444432
Q ss_pred CCCCCCCHHHHHHhccc-----CceEEEEccc----ccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc
Q 017640 191 NDDESPDLDKLKEMLSR-----KTKLVVIHHI----SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM 252 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~-----~~~~v~~~~~----~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~ 252 (368)
.-..++++++.+++. +..++++..+ .+++-...++..|..+-++.++.|++|-.|+.|..
T Consensus 130 --G~~~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~r 198 (250)
T PRK13397 130 --GLMATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGRR 198 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCccc
Confidence 214467777666532 3355554412 23333356788888777778999999999997753
No 440
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=42.56 E-value=1.4e+02 Score=26.84 Aligned_cols=84 Identities=15% Similarity=0.207 Sum_probs=47.0
Q ss_pred EEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHH----HHcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 132 IVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVA----QKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 132 v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~----~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
.++.+|+|.+|-..+.-- ..++|..+++..- ..+.+..++ ...|.++..++.|-...-+++.+...+..
T Consensus 8 ~~lITGASsGIG~~~A~~---lA~~g~~liLvaR----~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 8 TALITGASSGIGAELAKQ---LARRGYNLILVAR----REDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred EEEEECCCchHHHHHHHH---HHHCCCEEEEEeC----cHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence 345556666776554322 2567776666555 444344433 44567777888774433355666655544
Q ss_pred C---ceEEEEcccccccc
Q 017640 208 K---TKLVVIHHISNMLA 222 (368)
Q Consensus 208 ~---~~~v~~~~~~n~tG 222 (368)
+ +.+++=+....-.|
T Consensus 81 ~~~~IdvLVNNAG~g~~g 98 (265)
T COG0300 81 RGGPIDVLVNNAGFGTFG 98 (265)
T ss_pred cCCcccEEEECCCcCCcc
Confidence 3 56666666655556
No 441
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=42.48 E-value=2.1e+02 Score=24.27 Aligned_cols=39 Identities=10% Similarity=0.066 Sum_probs=27.7
Q ss_pred HHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 201 LKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 201 l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
++...+++--+++++. +|..-.+.++++.+|++|+.+|.
T Consensus 103 l~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~ 141 (196)
T PRK10886 103 VRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_pred HHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 4444455545566665 56667788999999999988774
No 442
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=42.15 E-value=2.8e+02 Score=25.51 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=51.6
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
++++|.|.+.....++.... .-++.-.|++.+ |...+ ......+ ...|+++..++.. .+-..+..-
T Consensus 122 ~~ILT~~~S~tv~~~l~~A~--~~~k~~~V~v~EsrP~~~G-~~~a~~L-~~~GI~vtlI~Ds--------av~~~m~~v 189 (310)
T PRK08535 122 DVIMTHCNSSAALSVIKTAH--EQGKDIEVIATETRPRNQG-HITAKEL-AEYGIPVTLIVDS--------AVRYFMKDV 189 (310)
T ss_pred CEEEEeCCcHHHHHHHHHHH--HCCCeEEEEEecCCchhhH-HHHHHHH-HHCCCCEEEEehh--------HHHHHHHhC
Confidence 67888665544444444431 112233555553 32233 2233333 4558888888732 222223221
Q ss_pred ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEE
Q 017640 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~ 243 (368)
.++++=...-...|.+.. --.++-+|+.|++++++
T Consensus 190 d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 190 DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 233332333344555555 45777888999987775
No 443
>COG0157 NadC Nicotinate-nucleotide pyrophosphorylase [Coenzyme metabolism]
Probab=41.50 E-value=1.8e+02 Score=26.25 Aligned_cols=138 Identities=14% Similarity=0.187 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccC----C--CCCCCCEEEEcCCCCcccHHHHHHHHHH----cCC-E
Q 017640 116 ARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGL----S--NLKSGDEVILTVAEHHSAIVPWQLVAQK----TGA-N 184 (368)
Q Consensus 116 ~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~----~--~~~~gd~vl~~~~~~~s~~~~~~~~~~~----~g~-~ 184 (368)
.++.+.+.=+.. -.|+-|.=++-++..+-.-..+ . ++.=.|.|++-+ +|-...-.+..+.++ .+. .
T Consensus 113 T~~~V~~~~~~~--~~i~~TRKT~PglR~leKyAV~~GGG~nHR~gLsDavliKD-NHia~~g~i~~Av~~aR~~~~~~~ 189 (280)
T COG0157 113 TARMVEALRGTN--VRIADTRKTTPGLRLLEKYAVRAGGGDNHRFGLSDAVLIKD-NHIAAAGSITEAVRRARAAAPFTK 189 (280)
T ss_pred HHHHHHHhhccC--cEEEeccCCCccHHHHHHHHHHhcCCccccCCCcceEEehh-hHHHHhccHHHHHHHHHHhCCCCc
Confidence 444444444444 2566654444444444322110 0 012236677665 343322223333322 232 2
Q ss_pred EEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-cCCCCCccE
Q 017640 185 LKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQGLDADF 263 (368)
Q Consensus 185 v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~~~~~~d~ 263 (368)
.++|.++ +++++++++...+.+|++.+-.- ..+++..++++.++ .+++-..-+.....+ .+...++|+
T Consensus 190 kIEVEve-----sle~~~eAl~agaDiImLDNm~~-----e~~~~av~~l~~~~-~~~lEaSGgIt~~ni~~yA~tGVD~ 258 (280)
T COG0157 190 KIEVEVE-----SLEEAEEALEAGADIIMLDNMSP-----EELKEAVKLLGLAG-RALLEASGGITLENIREYAETGVDV 258 (280)
T ss_pred eEEEEcC-----CHHHHHHHHHcCCCEEEecCCCH-----HHHHHHHHHhccCC-ceEEEEeCCCCHHHHHHHhhcCCCE
Confidence 3677776 89999999999999999988511 12455555543333 333333322211111 234457887
Q ss_pred EEec
Q 017640 264 LVAS 267 (368)
Q Consensus 264 ~~~s 267 (368)
++.|
T Consensus 259 IS~g 262 (280)
T COG0157 259 ISVG 262 (280)
T ss_pred EEeC
Confidence 7664
No 444
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=41.42 E-value=1.3e+02 Score=26.77 Aligned_cols=65 Identities=18% Similarity=0.276 Sum_probs=38.5
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
........++..|++...++.+.- +++ +.. .+..++.++- ..=.+.|.+.++++|..+++|++.+
T Consensus 59 e~e~A~~~A~~iGi~H~~i~~~~~---~~~-~~~--n~~~rCY~CK--------~~v~~~l~~~a~~~Gyd~V~dGtNa 123 (269)
T COG1606 59 EIEEAKNIAKEIGIRHEFIKMNRM---DPE-FKE--NPENRCYLCK--------RAVYSTLVEEAEKRGYDVVADGTNA 123 (269)
T ss_pred hhhHHHHHHHHhCCcceeeehhhc---chh-hcc--CCCCcchHHH--------HHHHHHHHHHHHHcCCCEEEeCCcH
Confidence 334556677888999888887521 111 110 0111111100 0116788899999999999999966
No 445
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=40.95 E-value=42 Score=28.97 Aligned_cols=49 Identities=12% Similarity=0.161 Sum_probs=33.5
Q ss_pred HHHHHHhcccCceEEEEcccccccccccC-HHHHHHHHHhcCCEEEEecC
Q 017640 198 LDKLKEMLSRKTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 198 ~~~l~~~l~~~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~g~~li~D~a 246 (368)
++.+++++.....++-+=.-+..+-..+. .+++.++|++|++.+++++-
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCc
Confidence 67777777766666655554444433333 57899999999998888765
No 446
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=40.78 E-value=3.8e+02 Score=27.12 Aligned_cols=104 Identities=15% Similarity=0.197 Sum_probs=65.5
Q ss_pred EeCCHHHHHHHHHHHccCCCCCCCCE-EEEcCCCCcccHHH--HHHHHHHcCC-EE-EEEeC--CCCCCCCHHHHHHhcc
Q 017640 134 FTKNATEAINLVAYSWGLSNLKSGDE-VILTVAEHHSAIVP--WQLVAQKTGA-NL-KFLNL--NDDESPDLDKLKEMLS 206 (368)
Q Consensus 134 ~t~g~t~a~~~~~~~~~~~~~~~gd~-vl~~~~~~~s~~~~--~~~~~~~~g~-~v-~~v~~--~~~~~~d~~~l~~~l~ 206 (368)
...+-..|...+..++ ..+.+ +++.+.+--++... +....+..|+ .+ .++|. .+.+.++.+.+++...
T Consensus 51 ~l~~m~~a~~ri~~ai-----~~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~ 125 (575)
T PRK11070 51 QLSGIEKAVELLYNAL-----REGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHA 125 (575)
T ss_pred HhhCHHHHHHHHHHHH-----HCCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHh
Confidence 3467888899888876 34444 44555544443322 3344466677 44 45664 3557789999998877
Q ss_pred cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
..+.+|+++.+.. . .++++ +.|+++|+-+|+=+-|-
T Consensus 126 ~~~~LiItvD~Gi----~-~~e~i-~~a~~~gidvIVtDHH~ 161 (575)
T PRK11070 126 RGAQLIVTVDNGI----S-SHAGV-AHAHALGIPVLVTDHHL 161 (575)
T ss_pred cCCCEEEEEcCCc----C-CHHHH-HHHHHCCCCEEEECCCC
Confidence 6777777666522 1 45655 66899998766655553
No 447
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=40.30 E-value=81 Score=27.40 Aligned_cols=69 Identities=10% Similarity=0.106 Sum_probs=32.8
Q ss_pred CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEE
Q 017640 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKV 241 (368)
Q Consensus 167 ~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~l 241 (368)
|......+...++..|.++.......+..-..+.++..+..++..+++...+ +. .. +..+.+++.|+.+
T Consensus 14 ~~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~-~~----~~-~~~~~~~~~~ipv 82 (266)
T cd06282 14 FAECVQGIQEEARAAGYSLLLATTDYDAEREADAVETLLRQRVDGLILTVAD-AA----TS-PALDLLDAERVPY 82 (266)
T ss_pred HHHHHHHHHHHHHHCCCEEEEeeCCCCHHHHHHHHHHHHhcCCCEEEEecCC-CC----ch-HHHHHHhhCCCCE
Confidence 3344455666667777777665543221111233344444456666654332 11 11 2445566667654
No 448
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=40.29 E-value=1.6e+02 Score=22.18 Aligned_cols=76 Identities=14% Similarity=0.190 Sum_probs=49.9
Q ss_pred CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-cCceEEEEcccccccccccCHHHHHHHHHhc--CCEEEE
Q 017640 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLASILPIEEIVHWSHDV--GAKVLV 243 (368)
Q Consensus 167 ~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~--g~~li~ 243 (368)
|+-....+..+.+..|.++..+..+. +.+++.+.+. .++.+|.++... +.......++++..|+. ++.+++
T Consensus 13 ~~lGl~~la~~l~~~G~~v~~~d~~~----~~~~l~~~~~~~~pd~V~iS~~~--~~~~~~~~~l~~~~k~~~p~~~iv~ 86 (121)
T PF02310_consen 13 HPLGLLYLAAYLRKAGHEVDILDANV----PPEELVEALRAERPDVVGISVSM--TPNLPEAKRLARAIKERNPNIPIVV 86 (121)
T ss_dssp TSHHHHHHHHHHHHTTBEEEEEESSB-----HHHHHHHHHHTTCSEEEEEESS--STHHHHHHHHHHHHHTTCTTSEEEE
T ss_pred hhHHHHHHHHHHHHCCCeEEEECCCC----CHHHHHHHHhcCCCcEEEEEccC--cCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 33334456667777899998886542 3466766553 478888887642 22334467777777776 789998
Q ss_pred ecCCc
Q 017640 244 DACQS 248 (368)
Q Consensus 244 D~a~~ 248 (368)
=+.+.
T Consensus 87 GG~~~ 91 (121)
T PF02310_consen 87 GGPHA 91 (121)
T ss_dssp EESSS
T ss_pred ECCch
Confidence 88775
No 449
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. In Gram-negative bacteria, this is the first step in the biosynthesis of 3-deoxy-D-manno-octulosonate, part of the oligosaccharide core of lipopolysaccharide.
Probab=40.24 E-value=88 Score=27.82 Aligned_cols=119 Identities=15% Similarity=0.213 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEe--CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEE
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFT--KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKF 187 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t--~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 187 (368)
.+.+ ++-+.+.+-+|.+ ++| .... =+..+... -|.+.+..-.-. .+. +...+.+.| +.
T Consensus 59 eeGL-~iL~~vk~~~glp-----vvTeV~~~~-~~~~vae~--------vDilQIgArn~r-n~~-LL~a~g~t~---kp 118 (258)
T TIGR01362 59 EEGL-KILQKVKEEFGVP-----ILTDVHESS-QCEPVAEV--------VDIIQIPAFLCR-QTD-LLVAAAKTG---RI 118 (258)
T ss_pred HHHH-HHHHHHHHHhCCc-----eEEEeCCHH-HHHHHHhh--------CcEEEeCchhcc-hHH-HHHHHhccC---Ce
Confidence 3444 3455677788887 333 1222 23333332 356666653111 122 222222222 33
Q ss_pred EeCCCCCCCCHHHHHHhcc-----cCceEEEEccccccccc---ccCHHHHHHHHHhcCCEEEEecCCcCC
Q 017640 188 LNLNDDESPDLDKLKEMLS-----RKTKLVVIHHISNMLAS---ILPIEEIVHWSHDVGAKVLVDACQSVP 250 (368)
Q Consensus 188 v~~~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~---~~~l~~i~~l~~~~g~~li~D~a~~~~ 250 (368)
|-+.......++++..+.+ .+.++++++-..+. |. +.|+..+.-+ ++.+.+||+|.+|+..
T Consensus 119 V~lKrG~~~t~~e~l~aaeyi~~~Gn~~viLcERG~tf-~y~r~~~D~~~ip~~-k~~~~PVi~DpSHsvq 187 (258)
T TIGR01362 119 VNVKKGQFLSPWDMKNVVEKVLSTGNKNILLCERGTSF-GYNNLVVDMRSLPIM-RELGCPVIFDATHSVQ 187 (258)
T ss_pred EEecCCCcCCHHHHHHHHHHHHHcCCCcEEEEeCCCCc-CCCCcccchhhhHHH-HhcCCCEEEeCCcccc
Confidence 3343443446666544432 25677777766543 44 5567777554 4458999999999843
No 450
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=39.88 E-value=27 Score=35.34 Aligned_cols=38 Identities=13% Similarity=0.093 Sum_probs=33.0
Q ss_pred EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 211 LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
.+..=.+++..|...+++++++-||++|+-||+|-+++
T Consensus 200 ~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 200 GTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 44555677888999999999999999999999999976
No 451
>PRK14974 cell division protein FtsY; Provisional
Probab=39.81 E-value=3.2e+02 Score=25.50 Aligned_cols=129 Identities=18% Similarity=0.196 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHcCCCC-------------CCcEEEe----CCHHHHHHHHHHHccCCCCCCCCEEEEcCC-CC-cccHH
Q 017640 112 EYELARKKVAAFINASD-------------SGEIVFT----KNATEAINLVAYSWGLSNLKSGDEVILTVA-EH-HSAIV 172 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~-------------~~~v~~t----~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~-~~-~s~~~ 172 (368)
..+.+++.+.+.++... +.-++|+ .|=|..+..++..+ .+.|-.|++.+. .| .+...
T Consensus 110 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~vi~~~G~~GvGKTTtiakLA~~l----~~~g~~V~li~~Dt~R~~a~e 185 (336)
T PRK14974 110 VKNALKEALLEVLSVGDLFDLIEEIKSKGKPVVIVFVGVNGTGKTTTIAKLAYYL----KKNGFSVVIAAGDTFRAGAIE 185 (336)
T ss_pred HHHHHHHHHHHHhCCCcchhhhhhhhccCCCeEEEEEcCCCCCHHHHHHHHHHHH----HHcCCeEEEecCCcCcHHHHH
Confidence 45567777777775321 2234444 23355566565555 344555544433 23 24445
Q ss_pred HHHHHHHHcCCEEEEEeCCCCCCCCHHH-----HHHhcccCceEEEEcccccccccccCHHHHHHH---HHhcCCEEEEe
Q 017640 173 PWQLVAQKTGANLKFLNLNDDESPDLDK-----LKEMLSRKTKLVVIHHISNMLASILPIEEIVHW---SHDVGAKVLVD 244 (368)
Q Consensus 173 ~~~~~~~~~g~~v~~v~~~~~~~~d~~~-----l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l---~~~~g~~li~D 244 (368)
.+...++..|+.+..... + .|+.. ++.+...+..+|++..+........-+++|..+ ++...+++++|
T Consensus 186 qL~~~a~~lgv~v~~~~~---g-~dp~~v~~~ai~~~~~~~~DvVLIDTaGr~~~~~~lm~eL~~i~~~~~pd~~iLVl~ 261 (336)
T PRK14974 186 QLEEHAERLGVKVIKHKY---G-ADPAAVAYDAIEHAKARGIDVVLIDTAGRMHTDANLMDELKKIVRVTKPDLVIFVGD 261 (336)
T ss_pred HHHHHHHHcCCceecccC---C-CCHHHHHHHHHHHHHhCCCCEEEEECCCccCCcHHHHHHHHHHHHhhCCceEEEeec
Confidence 566777777776543221 1 13332 232222344678888764432111114444444 44556778888
Q ss_pred cCCc
Q 017640 245 ACQS 248 (368)
Q Consensus 245 ~a~~ 248 (368)
+..+
T Consensus 262 a~~g 265 (336)
T PRK14974 262 ALAG 265 (336)
T ss_pred cccc
Confidence 7654
No 452
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=39.73 E-value=33 Score=30.49 Aligned_cols=23 Identities=17% Similarity=0.361 Sum_probs=17.0
Q ss_pred CHHHHHHHHHhcCCEEEEecCCc
Q 017640 226 PIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 226 ~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
+.+++.++|+++++-+++|++|-
T Consensus 54 ~~~~l~~~l~~~~i~~vIDATHP 76 (249)
T PF02571_consen 54 DEEGLAEFLRENGIDAVIDATHP 76 (249)
T ss_pred CHHHHHHHHHhCCCcEEEECCCc
Confidence 56777777777777777777764
No 453
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=39.20 E-value=1.5e+02 Score=23.78 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=39.0
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-----CceEEEEcccccccccccCHHHHHHHH
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-----KTKLVVIHHISNMLASILPIEEIVHWS 234 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG~~~~l~~i~~l~ 234 (368)
+...+....+..|+++.....-+| |.+.+++.+.. +..+|+++....++-.-+..+.+.++.
T Consensus 21 n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~~~~DlVittGG~s~g~~D~t~~al~~~~ 87 (152)
T cd00886 21 SGPALVELLEEAGHEVVAYEIVPD---DKDEIREALIEWADEDGVDLILTTGGTGLAPRDVTPEATRPLL 87 (152)
T ss_pred hHHHHHHHHHHcCCeeeeEEEcCC---CHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCcCcHHHHHHHh
Confidence 444567778888999888776655 56666665542 467777776655543333345555544
No 454
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=39.05 E-value=1.3e+02 Score=23.90 Aligned_cols=49 Identities=16% Similarity=0.219 Sum_probs=32.6
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEccccccc
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISNML 221 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n~t 221 (368)
+...+....+..|.++....+-+| |.+.|.+++. .+..+|+++....++
T Consensus 28 n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~~DliIttGG~g~g 79 (144)
T TIGR00177 28 NGPLLAALLEEAGFNVSRLGIVPD---DPEEIREILRKAVDEADVVLTTGGTGVG 79 (144)
T ss_pred cHHHHHHHHHHCCCeEEEEeecCC---CHHHHHHHHHHHHhCCCEEEECCCCCCC
Confidence 444567777888999988776655 5566665554 256777877665543
No 455
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=38.32 E-value=2.1e+02 Score=24.66 Aligned_cols=91 Identities=16% Similarity=0.214 Sum_probs=47.7
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-------CceEE
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-------KTKLV 212 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-------~~~~v 212 (368)
.++..++..+ +...-.++.+...+... ....++..|.......+--|...|.+.+++.+.. +-.+|
T Consensus 106 ~~m~~vl~~l-----~~~gl~FvDS~T~~~s~--a~~~A~~~gvp~~~rdvfLD~~~~~~~I~~ql~~~~~~A~~~G~aI 178 (213)
T PF04748_consen 106 EAMRWVLEVL-----KERGLFFVDSRTTPRSV--APQVAKELGVPAARRDVFLDNDQDEAAIRRQLDQAARIARKQGSAI 178 (213)
T ss_dssp HHHHHHHHHH-----HHTT-EEEE-S--TT-S--HHHHHHHCT--EEE-SEETTST-SHHHHHHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHHHH-----HHcCCEEEeCCCCcccH--HHHHHHHcCCCEEeeceecCCCCCHHHHHHHHHHHHHhhhhcCcEE
Confidence 4677777665 33445566444433322 4566777887765544433444688888887753 45788
Q ss_pred EEcccccccccccCHHHHHHH---HHhcCCEEE
Q 017640 213 VIHHISNMLASILPIEEIVHW---SHDVGAKVL 242 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~~i~~l---~~~~g~~li 242 (368)
.+.|++..| ++.|.++ .++.|+-++
T Consensus 179 ~Igh~~p~T-----l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 179 AIGHPRPET-----LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp EEEE-SCCH-----HHHHHHHHHHHHHCTEEE-
T ss_pred EEEcCCHHH-----HHHHHHHHhHHhhCCEEEE
Confidence 888886553 4444444 446676553
No 456
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=38.15 E-value=2.7e+02 Score=24.97 Aligned_cols=77 Identities=14% Similarity=0.160 Sum_probs=46.1
Q ss_pred CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC----HHHHHH
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP----IEEIVH 232 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----l~~i~~ 232 (368)
-|.+++++--.--. ..+...++.+|++.+++-.... +.+.+++........+++.+.+..||...+ +.++.+
T Consensus 123 vdGlivpDLP~ee~-~~~~~~~~~~gi~~I~lvaPtt---~~~rl~~i~~~a~GFiY~vs~~GvTG~~~~~~~~~~~~v~ 198 (265)
T COG0159 123 VDGLLVPDLPPEES-DELLKAAEKHGIDPIFLVAPTT---PDERLKKIAEAASGFIYYVSRMGVTGARNPVSADVKELVK 198 (265)
T ss_pred CCEEEeCCCChHHH-HHHHHHHHHcCCcEEEEeCCCC---CHHHHHHHHHhCCCcEEEEecccccCCCcccchhHHHHHH
Confidence 36777775433222 2467777888887665433211 334555554444467777777778898877 456666
Q ss_pred HHHhc
Q 017640 233 WSHDV 237 (368)
Q Consensus 233 l~~~~ 237 (368)
..|++
T Consensus 199 ~vr~~ 203 (265)
T COG0159 199 RVRKY 203 (265)
T ss_pred HHHHh
Confidence 66654
No 457
>PRK00077 eno enolase; Provisional
Probab=37.95 E-value=2.8e+02 Score=26.80 Aligned_cols=86 Identities=15% Similarity=0.244 Sum_probs=56.9
Q ss_pred CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcccccccccccCHHHHHHH
Q 017640 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHW 233 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l 233 (368)
++=+.+++.+|-.+..+..+..+.+..|.++ .+-.++...-++..+++.+..+. .++.+ -+ +..|.+....+++++
T Consensus 275 e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~i-pI~gdE~~~t~~~~~~~~i~~~a~d~v~i-k~-~~~GGitea~~ia~l 351 (425)
T PRK00077 275 DKYPIVSIEDGLDENDWEGWKLLTEKLGDKV-QLVGDDLFVTNTKRLKKGIEKGAANSILI-KV-NQIGTLTETLDAIEL 351 (425)
T ss_pred hhCCcEEEEcCCCCccHHHHHHHHHhcCCCC-eEEcCCCccCCHHHHHHHHHhCCCCEEEe-Cc-cccCCHHHHHHHHHH
Confidence 3344678889988888888888877664222 23333333336888888887654 33333 22 345777788899999
Q ss_pred HHhcCCEEEE
Q 017640 234 SHDVGAKVLV 243 (368)
Q Consensus 234 ~~~~g~~li~ 243 (368)
|+++|+.+++
T Consensus 352 A~~~gi~~~v 361 (425)
T PRK00077 352 AKRAGYTAVV 361 (425)
T ss_pred HHHcCCeEEE
Confidence 9999986653
No 458
>PLN02672 methionine S-methyltransferase
Probab=37.67 E-value=3.6e+02 Score=29.68 Aligned_cols=119 Identities=14% Similarity=0.175 Sum_probs=62.6
Q ss_pred HHHHHHHHH----cCCC-CCCcEEEeCCHHHHHHHHHHHccCC--CCCCCCEEEEcCCCCcccHHHHHHHHHHcC-----
Q 017640 115 LARKKVAAF----INAS-DSGEIVFTKNATEAINLVAYSWGLS--NLKSGDEVILTVAEHHSAIVPWQLVAQKTG----- 182 (368)
Q Consensus 115 ~~r~~la~~----~~~~-~~~~v~~t~g~t~a~~~~~~~~~~~--~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g----- 182 (368)
.+|+.+|.+ ++.+ .+++|++.++-..|++.+++.+... -+..+.+-.++. .|......-|
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 501 (1082)
T PLN02672 430 RFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPK--------KWLTSLAIENATSDS 501 (1082)
T ss_pred HHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCH--------HHHhHhhhhcccccC
Confidence 455555554 4555 3459999999999999998876210 012221122211 1211111111
Q ss_pred ---C--EEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 183 ---A--NLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 183 ---~--~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
. +|+.-|.. .+.+.+.+++ ++.+|+.......--..-.++.|...+++.|+.++.|..-
T Consensus 502 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 502 KSDDVITVIEAPRQ------SDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred ccCCeEEEEeCCCc------chHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhh
Confidence 2 22222222 1223333333 5677776555332111122788999999999999999883
No 459
>PRK12723 flagellar biosynthesis regulator FlhF; Provisional
Probab=37.56 E-value=2.5e+02 Score=26.75 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=49.9
Q ss_pred CCCEEEEc--CCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc--cCceEEEEcccccccccccCHHHHH
Q 017640 156 SGDEVILT--VAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS--RKTKLVVIHHISNMLASILPIEEIV 231 (368)
Q Consensus 156 ~gd~vl~~--~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~l~~i~ 231 (368)
.|..|.+. ++.-.+....+..+++..|..+..+. +.+++.+.+. .+..+|++..+.-.......++++.
T Consensus 205 ~g~~V~lit~Dt~R~aa~eQL~~~a~~lgvpv~~~~-------~~~~l~~~L~~~~~~DlVLIDTaGr~~~~~~~l~el~ 277 (388)
T PRK12723 205 KSLNIKIITIDNYRIGAKKQIQTYGDIMGIPVKAIE-------SFKDLKEEITQSKDFDLVLVDTIGKSPKDFMKLAEMK 277 (388)
T ss_pred CCCeEEEEeccCccHHHHHHHHHHhhcCCcceEeeC-------cHHHHHHHHHHhCCCCEEEEcCCCCCccCHHHHHHHH
Confidence 34444433 33233455556777776776554333 4556665443 3557888888755443333366777
Q ss_pred HHHHhc----CCEEEEecCCc
Q 017640 232 HWSHDV----GAKVLVDACQS 248 (368)
Q Consensus 232 ~l~~~~----g~~li~D~a~~ 248 (368)
++.+.. ..++++|++..
T Consensus 278 ~~l~~~~~~~e~~LVlsat~~ 298 (388)
T PRK12723 278 ELLNACGRDAEFHLAVSSTTK 298 (388)
T ss_pred HHHHhcCCCCeEEEEEcCCCC
Confidence 776643 57889998876
No 460
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=37.11 E-value=2.9e+02 Score=26.15 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=44.9
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCce
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~ 210 (368)
.|+-.+++..++-++..+-. ..=.-.|++++. .+ ..-....+.+|++++.++...+..-..+..++.+++++.
T Consensus 113 ~vV~aSsGN~G~alA~~a~~---~G~~~~ivvp~~--~~--~~k~~~lr~~GA~Vi~~~~~~~~~~~~~~a~~l~~~~~~ 185 (368)
T PLN02556 113 TLIEPTSGNMGISLAFMAAM---KGYKMILTMPSY--TS--LERRVTMRAFGAELVLTDPTKGMGGTVKKAYELLESTPD 185 (368)
T ss_pred EEEEeCCchHHHHHHHHHHH---cCCCEEEEECCC--CC--HHHHHHHHHcCCEEEEECCCCCccHHHHHHHHHHHhcCC
Confidence 56666777778777776641 222234555443 22 223455677899999887432211123333444444445
Q ss_pred EEEEcccccccc
Q 017640 211 LVVIHHISNMLA 222 (368)
Q Consensus 211 ~v~~~~~~n~tG 222 (368)
.+.+...+||.+
T Consensus 186 ~~~~~q~~np~~ 197 (368)
T PLN02556 186 AFMLQQFSNPAN 197 (368)
T ss_pred CCccCCCCCHHH
Confidence 555555556543
No 461
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=37.07 E-value=2.5e+02 Score=25.95 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHH--------HHHHHHHHHccCCCCCCCCEEEEcCCCCcc
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNAT--------EAINLVAYSWGLSNLKSGDEVILTVAEHHS 169 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t--------~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s 169 (368)
-...+++.|-+.||.+.++-+++|.--+ .-|..++.-+.. ..++||.+++.-..|.+
T Consensus 86 Dv~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~-~aq~gD~LvfHYSGHGt 150 (362)
T KOG1546|consen 86 DVHRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVE-SAQPGDSLVFHYSGHGT 150 (362)
T ss_pred HHHHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHh-cCCCCCEEEEEecCCCC
Confidence 3446888899999998653334442111 123344433321 46899988887766665
No 462
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=36.17 E-value=3.1e+02 Score=25.98 Aligned_cols=84 Identities=20% Similarity=0.329 Sum_probs=45.6
Q ss_pred CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccc--------c
Q 017640 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASI--------L 225 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~--------~ 225 (368)
+.|..+++.+.+.. ...+...+++.|.....+.+.. ..+++.+.+.+.. ++++|++...++..... .
T Consensus 108 ~~g~~VlYvs~EEs--~~qi~~Ra~rlg~~~~~l~l~~--e~~le~I~~~i~~~~~~lVVIDSIq~l~~~~~~~~~g~~~ 183 (372)
T cd01121 108 KRGGKVLYVSGEES--PEQIKLRADRLGISTENLYLLA--ETNLEDILASIEELKPDLVIIDSIQTVYSSELTSAPGSVS 183 (372)
T ss_pred hcCCeEEEEECCcC--HHHHHHHHHHcCCCcccEEEEc--cCcHHHHHHHHHhcCCcEEEEcchHHhhccccccCCCCHH
Confidence 44456655443322 2234444455564322221111 1267777777754 78999999987653211 1
Q ss_pred C----HHHHHHHHHhcCCEEE
Q 017640 226 P----IEEIVHWSHDVGAKVL 242 (368)
Q Consensus 226 ~----l~~i~~l~~~~g~~li 242 (368)
- +.+|.++++++|+.++
T Consensus 184 qvr~~~~~L~~lak~~~itvi 204 (372)
T cd01121 184 QVRECTAELMRFAKERNIPIF 204 (372)
T ss_pred HHHHHHHHHHHHHHHcCCeEE
Confidence 1 3457788999997553
No 463
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=35.99 E-value=3.2e+02 Score=24.45 Aligned_cols=83 Identities=5% Similarity=0.057 Sum_probs=49.7
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC----HHHHHHH
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP----IEEIVHW 233 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~----l~~i~~l 233 (368)
|.|++++-.+. -...+...++..|...+.+=.... ..+.++...+.....|++.+....||.... ++++.+.
T Consensus 121 dgviipDLP~e-e~~~~~~~~~~~gi~~I~lv~PtT---~~eri~~i~~~a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ 196 (263)
T CHL00200 121 KGLIIPDLPYE-ESDYLISVCNLYNIELILLIAPTS---SKSRIQKIARAAPGCIYLVSTTGVTGLKTELDKKLKKLIET 196 (263)
T ss_pred eEEEecCCCHH-HHHHHHHHHHHcCCCEEEEECCCC---CHHHHHHHHHhCCCcEEEEcCCCCCCCCccccHHHHHHHHH
Confidence 67777765443 234566777888887655432211 345555555444446665557788898533 5666666
Q ss_pred HHhc-CCEEEEe
Q 017640 234 SHDV-GAKVLVD 244 (368)
Q Consensus 234 ~~~~-g~~li~D 244 (368)
.|++ +.++.+|
T Consensus 197 ir~~t~~Pi~vG 208 (263)
T CHL00200 197 IKKMTNKPIILG 208 (263)
T ss_pred HHHhcCCCEEEE
Confidence 6665 6667665
No 464
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=35.70 E-value=2.8e+02 Score=26.61 Aligned_cols=98 Identities=16% Similarity=0.179 Sum_probs=62.2
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
.+++......+ ++=+.+++.+|-.......|..+.+..|..+ .+-.++...-++..+++.+..+..=++..-+
T Consensus 264 ~eai~~~~~l~-----e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~i-pi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~- 336 (408)
T cd03313 264 EELIDYYKELV-----KKYPIVSIEDPFDEDDWEGWAKLTAKLGDKI-QIVGDDLFVTNPERLKKGIEKKAANALLIKV- 336 (408)
T ss_pred HHHHHHHHHHH-----HhCCcEEEEeCCCCcCHHHHHHHHHhcCCCC-eEEcCCcccCCHHHHHHHHHhCCCCEEEEcc-
Confidence 45555554432 3334678889988888888888877764333 2222332333788888888765422332222
Q ss_pred cccccccCHHHHHHHHHhcCCEEEE
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
+..|.+....+++++|+++|+.+++
T Consensus 337 ~~iGGite~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 337 NQIGTLTETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEc
Confidence 3356677788899999999988763
No 465
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=35.58 E-value=1.1e+02 Score=26.80 Aligned_cols=74 Identities=18% Similarity=0.308 Sum_probs=41.2
Q ss_pred cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCE-EEEecC
Q 017640 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK-VLVDAC 246 (368)
Q Consensus 168 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~-li~D~a 246 (368)
......+...++..|.++..+....+-.-..+.++..+..++..+++..+... ...++.+.+++.|+. +.+|..
T Consensus 15 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~vdgii~~~~~~~-----~~~~~i~~~~~~~ipvV~~~~~ 89 (273)
T cd06305 15 QAYLAGTKAEAEALGGDLRVYDAGGDDAKQADQIDQAIAQKVDAIIIQHGRAE-----VLKPWVKRALDAGIPVVAFDVD 89 (273)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChh-----hhHHHHHHHHHcCCCEEEecCC
Confidence 34555677778888988877653322111124455556667777777654211 123444556777864 445543
No 466
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=35.51 E-value=1.4e+02 Score=26.18 Aligned_cols=80 Identities=14% Similarity=0.069 Sum_probs=40.0
Q ss_pred CCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEE-E
Q 017640 164 VAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKV-L 242 (368)
Q Consensus 164 ~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~l-i 242 (368)
++.|......+...++..|.++.......+..-..+.++..+..++..+++....+.. ........+.+.+.|+.+ +
T Consensus 11 ~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~--~~~~~~~i~~~~~~~ipvV~ 88 (273)
T cd06292 11 NPIFPAFAEAIEAALAQYGYTVLLCNTYRGGVSEADYVEDLLARGVRGVVFISSLHAD--THADHSHYERLAERGLPVVL 88 (273)
T ss_pred CchHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHcCCCEEEEeCCCCCc--ccchhHHHHHHHhCCCCEEE
Confidence 3334445566777778888887666544322212234555555677766665432211 111222233345667643 4
Q ss_pred Eec
Q 017640 243 VDA 245 (368)
Q Consensus 243 ~D~ 245 (368)
+|.
T Consensus 89 i~~ 91 (273)
T cd06292 89 VNG 91 (273)
T ss_pred EcC
Confidence 543
No 467
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=35.46 E-value=1e+02 Score=27.80 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=42.6
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 165 AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 165 ~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
+-+......+...++..|.++...+...+.....+.++..+..++..|++...... .+.+..+.++++|++++
T Consensus 11 ~~~~~~~~~i~~~a~~~g~~v~~~~~~~~~~~q~~~i~~l~~~~vDgIIi~~~~~~-----~~~~~l~~~~~~~iPvV 83 (302)
T TIGR02634 11 ERWQKDRDIFVAAAESLGAKVFVQSANGNEAKQISQIENLIARGVDVLVIIPQNGQ-----VLSNAVQEAKDEGIKVV 83 (302)
T ss_pred hhHHHHHHHHHHHHHhcCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----HHHHHHHHHHHCCCeEE
Confidence 33344556677778888888877654433221234556666667777777543211 13455566778887664
No 468
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=35.40 E-value=4.2e+02 Score=25.57 Aligned_cols=87 Identities=20% Similarity=0.186 Sum_probs=49.6
Q ss_pred HHHHHHHHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccc
Q 017640 140 EAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
+...+++..+ ...| ..|.+.+- ++.....+++..|+++. .++++.+.+.+---+|.-++..
T Consensus 188 em~~lva~~L----~~~g~~~i~IaNR----T~erA~~La~~~~~~~~----------~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 188 EMGELVAKHL----AEKGVKKITIANR----TLERAEELAKKLGAEAV----------ALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred HHHHHHHHHH----HhCCCCEEEEEcC----CHHHHHHHHHHhCCeee----------cHHHHHHhhhhCCEEEEecCCC
Confidence 5677777766 5555 67777777 66667788888885443 3455666664432222222222
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
.| +.+...+....+.+.-++++|-+-
T Consensus 250 ~~---ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 250 HP---IITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred cc---ccCHHHHHHHHhcccCeEEEEecC
Confidence 22 344555555544332289999553
No 469
>cd06319 PBP1_ABC_sugar_binding_like_10 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=35.20 E-value=74 Score=27.92 Aligned_cols=72 Identities=11% Similarity=0.144 Sum_probs=41.5
Q ss_pred cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Ee
Q 017640 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VD 244 (368)
Q Consensus 168 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D 244 (368)
......+...++..|.++..+....+..-..+.++..+..++..+++.....+ ...++.+.+++.|++++ +|
T Consensus 15 ~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~dgiii~~~~~~-----~~~~~l~~~~~~~ipvV~~~ 87 (277)
T cd06319 15 QIMGRGVKSKAKALGYDAVELSAENSAKKELENLRTAIDKGVSGIIISPTNSS-----AAVTLLKLAAQAKIPVVIAD 87 (277)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCchh-----hhHHHHHHHHHCCCCEEEEe
Confidence 34455666777788888877654322211234455566667777776543211 13455677778887555 44
No 470
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=35.13 E-value=89 Score=26.57 Aligned_cols=34 Identities=12% Similarity=0.201 Sum_probs=25.2
Q ss_pred CceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+..+++. .-|..|...+.+++.+++++||+.++
T Consensus 152 ~p~avi~e-il~~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 152 SPVAVICE-ILDDDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp -SBEEEEE-BBETTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCcEEEEE-EeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 34444444 44669999999999999999999876
No 471
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=34.82 E-value=3.1e+02 Score=24.22 Aligned_cols=48 Identities=13% Similarity=0.261 Sum_probs=28.6
Q ss_pred CCCHHHHHHhcc-----cCceEEEEcccccccccc---cC--------HHHHHHHHHhcCCEEE
Q 017640 195 SPDLDKLKEMLS-----RKTKLVVIHHISNMLASI---LP--------IEEIVHWSHDVGAKVL 242 (368)
Q Consensus 195 ~~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~---~~--------l~~i~~l~~~~g~~li 242 (368)
..+++.+.+.+. .++++|++.+.+...... .+ +..|..+++++|+.++
T Consensus 122 ~~~~~~i~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~~L~~la~~~~vtvl 185 (271)
T cd01122 122 EYSMDSVLEKVRYMAVSHGIQHIIIDNLSIMVSDERASGDERKALDEIMTKLRGFATEHGIHIT 185 (271)
T ss_pred ccCHHHHHHHHHHHHhcCCceEEEECCHHHHhccCCCchhHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 345666655543 257888888876544321 11 3457777888887544
No 472
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=34.80 E-value=1.1e+02 Score=26.54 Aligned_cols=46 Identities=11% Similarity=0.176 Sum_probs=20.6
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEc
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
....+...++..|.++.......+..-..+.+++.+..+...+++.
T Consensus 17 ~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~~dgii~~ 62 (259)
T cd01542 17 TVKGILAALYENGYQMLLMNTNFSIEKEIEALELLARQKVDGIILL 62 (259)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEe
Confidence 3444555555566666554433221111233444444455555554
No 473
>cd00885 cinA Competence-damaged protein. CinA is the first gene in the competence- inducible (cin) operon and is thought to be specifically required at some stage in the process of transformation. This domain is closely related to a domain, found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, where the domain is presumed to bind molybdopterin.
Probab=34.73 E-value=1.3e+02 Score=24.88 Aligned_cols=71 Identities=17% Similarity=0.160 Sum_probs=41.6
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
+...+....+..|.++..+.+-+| |.+.|.+++. ++..+|+++....+|..-...+.+.+. .|..+..|+.
T Consensus 20 n~~~l~~~L~~~G~~v~~~~~v~D---d~~~I~~~l~~~~~~~dlVIttGG~G~t~~D~t~ea~~~~---~~~~l~~~~e 93 (170)
T cd00885 20 NAAFLAKELAELGIEVYRVTVVGD---DEDRIAEALRRASERADLVITTGGLGPTHDDLTREAVAKA---FGRPLVLDEE 93 (170)
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCC---CHHHHHHHHHHHHhCCCEEEECCCCCCCCCChHHHHHHHH---hCCCcccCHH
Confidence 344466667778998877665544 4555555553 256788888776665443334555443 3444554444
No 474
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=34.49 E-value=28 Score=31.29 Aligned_cols=32 Identities=22% Similarity=0.427 Sum_probs=26.7
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
+....|..-+++++++.||++|+.||+|.+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 44456777789999999999999999999843
No 475
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=34.44 E-value=3.4e+02 Score=24.21 Aligned_cols=97 Identities=10% Similarity=0.068 Sum_probs=55.1
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
++++|-|.+..+..++... +++.+|++.+ |.+.+ ....+.+ ...|+++..++.. .+-..+ ++
T Consensus 88 dvILT~s~S~~v~~~l~~~-----~~~~~V~v~ESrP~~eG-~~~a~~L-~~~GI~vtli~Ds--------a~~~~m-~~ 151 (253)
T PRK06372 88 SVIGTISSSQVLKAFISSS-----EKIKSVYILESRPMLEG-IDMAKLL-VKSGIDVVLLTDA--------SMCEAV-LN 151 (253)
T ss_pred CEEEEeCCcHHHHHHHHhc-----CCCCEEEEecCCCchHH-HHHHHHH-HHCCCCEEEEehh--------HHHHHH-Hh
Confidence 6888888777777777543 3334666654 44444 2233333 3458888877622 222222 23
Q ss_pred ceEEEE-cccccccccccC---HHHHHHHHHhcCCEEEE
Q 017640 209 TKLVVI-HHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 209 ~~~v~~-~~~~n~tG~~~~---l~~i~~l~~~~g~~li~ 243 (368)
...|++ ...-...|.++. -..++-.|+++++++++
T Consensus 152 vd~VlvGAd~V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 152 VDAVIVGSDSVLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred CCEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 333333 222234555555 45677788999998887
No 476
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=34.42 E-value=35 Score=33.55 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=26.0
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
....|...+++++++.||++|+.||+|.+
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 44578888899999999999999999999
No 477
>PRK05595 replicative DNA helicase; Provisional
Probab=34.33 E-value=1.7e+02 Score=28.34 Aligned_cols=48 Identities=8% Similarity=0.142 Sum_probs=26.9
Q ss_pred CCHHHHHHhcc-----cCceEEEEcccccccccc--cC--------HHHHHHHHHhcCCEEEE
Q 017640 196 PDLDKLKEMLS-----RKTKLVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 196 ~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~g~~li~ 243 (368)
++++.++..+. .++++|++.+.+-..+.. .. .+.|..+|+++++++++
T Consensus 294 ~t~~~i~~~~r~~~~~~~~~~vvIDylql~~~~~~~~~r~~~v~~is~~LK~lAke~~i~vi~ 356 (444)
T PRK05595 294 VSVMEMRSKCRRLKIEHGIDMILIDYLQLMSGGKGSESRQQEVSEISRSIKALAKEMECPVIA 356 (444)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeHHHhccCCCCCccHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 45555554442 246778877766544221 11 23566677788877664
No 478
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=34.10 E-value=3.2e+02 Score=26.40 Aligned_cols=82 Identities=12% Similarity=0.167 Sum_probs=55.2
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcccccccccccCHHHHHHHHHh
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHWSHD 236 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l~~~ 236 (368)
+.+++.+|-.......+..+.+..|-++ .+-.++...-++..++..+..+. .++.+.. +..|.+....+++++|++
T Consensus 279 ~i~~iEdPl~~~D~~~~~~L~~~~~~~i-pI~gDE~~~t~~~~~~~~i~~~a~d~v~ik~--~~iGGItea~~ia~lA~~ 355 (425)
T TIGR01060 279 PIVSIEDGLSEEDWEGWAELTKELGDKV-QIVGDDLFVTNTEILREGIEMGVANSILIKP--NQIGTLTETLDAVELAKK 355 (425)
T ss_pred CcEEEEcCCCcccHHHHHHHHHhcCCCC-eEEeCCCcccCHHHHHHHHHhCCCCEEEecc--cccCCHHHHHHHHHHHHH
Confidence 4668888988877888888876653222 22333333336888888887654 3333332 456778888899999999
Q ss_pred cCCEEE
Q 017640 237 VGAKVL 242 (368)
Q Consensus 237 ~g~~li 242 (368)
+|+.++
T Consensus 356 ~Gi~~v 361 (425)
T TIGR01060 356 AGYTAV 361 (425)
T ss_pred cCCcEE
Confidence 998755
No 479
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=34.10 E-value=1.1e+02 Score=26.00 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=26.5
Q ss_pred eEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
.+|+++-.+|..|.+.|.+.-+++++++|+.+..
T Consensus 114 vvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iyt 147 (191)
T cd01455 114 IVIVLSDANLERYGIQPKKLADALAREPNVNAFV 147 (191)
T ss_pred EEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEE
Confidence 5667888888888888877667889999987653
No 480
>cd06318 PBP1_ABC_sugar_binding_like_9 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=34.09 E-value=87 Score=27.61 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=40.9
Q ss_pred CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 167 ~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
+......+...++..|.++.......+..-..+.++..+..++..|++.... +. .+.++.+.+++.|+.++ +|.
T Consensus 14 ~~~~~~~i~~~~~~~g~~v~~~~~~~~~~~~~~~i~~~~~~~~Dgiii~~~~-~~----~~~~~i~~~~~~~iPvV~~~~ 88 (282)
T cd06318 14 FAALTEAAKAHAKALGYELISTDAQGDLTKQIADVEDLLTRGVNVLIINPVD-PE----GLVPAVAAAKAAGVPVVVVDS 88 (282)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCC-cc----chHHHHHHHHHCCCCEEEecC
Confidence 3344456667778888888766543221111234566666677777775432 11 12344556677887544 554
No 481
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=33.82 E-value=2.3e+02 Score=26.71 Aligned_cols=122 Identities=10% Similarity=0.101 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+.+..+ ...++-+|.+ ++-+.-....+..+.... |.+.+.+..-.. + .+...+...|. ++.+.
T Consensus 169 e~l~~L-~~~~~~~Gl~----~~t~v~d~~~~~~l~~~v--------d~lkI~s~~~~n-~-~LL~~~a~~gk-PVilk- 231 (360)
T PRK12595 169 EGLKIL-KQVADEYGLA----VISEIVNPADVEVALDYV--------DVIQIGARNMQN-F-ELLKAAGRVNK-PVLLK- 231 (360)
T ss_pred HHHHHH-HHHHHHcCCC----EEEeeCCHHHHHHHHHhC--------CeEEECcccccC-H-HHHHHHHccCC-cEEEe-
Confidence 444444 3346777775 233333445566665432 344444432222 2 23333333343 33443
Q ss_pred CCCCC-CCHHHHHHhccc-----CceEEEEccccc--c--cccccCHHHHHHHHHhcCCEEEEecCCcCCc
Q 017640 191 NDDES-PDLDKLKEMLSR-----KTKLVVIHHISN--M--LASILPIEEIVHWSHDVGAKVLVDACQSVPH 251 (368)
Q Consensus 191 ~~~~~-~d~~~l~~~l~~-----~~~~v~~~~~~n--~--tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~ 251 (368)
.|. .++++++.+++. +..++++..+.+ | +=...++..|..+-++.++.|++|..|+.|.
T Consensus 232 --~G~~~t~~e~~~Ave~i~~~Gn~~i~L~erg~s~yp~~~~~~ldl~~i~~lk~~~~~PV~~d~~Hs~G~ 300 (360)
T PRK12595 232 --RGLSATIEEFIYAAEYIMSQGNGQIILCERGIRTYEKATRNTLDISAVPILKQETHLPVMVDVTHSTGR 300 (360)
T ss_pred --CCCCCCHHHHHHHHHHHHHCCCCCEEEECCccCCCCCCCCCCcCHHHHHHHHHHhCCCEEEeCCCCCcc
Confidence 233 477777776642 345555542332 2 2233578999888888999999999999773
No 482
>PLN03013 cysteine synthase
Probab=33.26 E-value=1.8e+02 Score=28.17 Aligned_cols=83 Identities=12% Similarity=0.132 Sum_probs=44.0
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCce
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~ 210 (368)
.|+-.+++..++-++..+-. ..-.-.|++++.. -..-....+.+|++++.++...+..-..+..++...+...
T Consensus 177 ~VVeaSSGN~G~ALA~~a~~---~G~~~~VvvP~~~----s~~K~~~ira~GAeVi~v~~~~~~~~a~~~A~ela~~~~g 249 (429)
T PLN03013 177 VLVEPTSGNTGIGLAFIAAS---RGYRLILTMPASM----SMERRVLLKAFGAELVLTDPAKGMTGAVQKAEEILKNTPD 249 (429)
T ss_pred EEEEECCcHHHHHHHHHHHH---cCCCEEEEECCCC----cHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhhcCC
Confidence 46666777788877776541 2223345555542 2234556677899999886432211012233333333334
Q ss_pred EEEEcccccc
Q 017640 211 LVVIHHISNM 220 (368)
Q Consensus 211 ~v~~~~~~n~ 220 (368)
.+++....||
T Consensus 250 ~~~~~qy~Np 259 (429)
T PLN03013 250 AYMLQQFDNP 259 (429)
T ss_pred eEeCCCCCCH
Confidence 5555554555
No 483
>PRK03673 hypothetical protein; Provisional
Probab=33.16 E-value=1.2e+02 Score=28.94 Aligned_cols=71 Identities=14% Similarity=0.100 Sum_probs=47.0
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
+...+...+...|+++....+-+| |.+.|.+.+.. +..+|+++....||-.-+..+.+ |+..|..++.|+.
T Consensus 22 N~~~la~~L~~~G~~v~~~~~v~D---~~~~i~~~l~~a~~~~DlVI~tGGlGpt~dD~t~~av---A~a~g~~L~~d~e 95 (396)
T PRK03673 22 NAAWLADFFFHQGLPLSRRNTVGD---NLDALVAILRERSQHADVLIVNGGLGPTSDDLSALAA---ATAAGEGLVLHEE 95 (396)
T ss_pred HHHHHHHHHHHCCCEEEEEEEcCC---CHHHHHHHHHHHhccCCEEEEcCCCCCCCcccHHHHH---HHHcCCCceeCHH
Confidence 444566667788999887776555 56667666543 56789998887776544444444 4456677777766
No 484
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=32.97 E-value=2.3e+02 Score=23.19 Aligned_cols=65 Identities=11% Similarity=0.078 Sum_probs=40.5
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-----cCceEEEEcccccccccccCHHHHHHHHHh
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-----RKTKLVVIHHISNMLASILPIEEIVHWSHD 236 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~ 236 (368)
++...+....+..|+++..+.+-+| |.+.+++++. .+..+|+++.....+-.-+..+.+.++.++
T Consensus 22 ~n~~~l~~~L~~~G~~v~~~~iv~D---d~~~i~~~l~~~~~~~~~DlVIttGGtg~g~~D~t~eal~~l~~~ 91 (163)
T TIGR02667 22 TSGQYLVERLTEAGHRLADRAIVKD---DIYQIRAQVSAWIADPDVQVILITGGTGFTGRDVTPEALEPLFDK 91 (163)
T ss_pred CcHHHHHHHHHHCCCeEEEEEEcCC---CHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCcHHHHHHHHCC
Confidence 3455567777888999887776555 5555555542 346788887765554333345666666544
No 485
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=32.93 E-value=2.7e+02 Score=25.03 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=46.3
Q ss_pred CCCCEEEEcCCC-Cc-ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHH-----HHHHhcccCceEEEEccccccccccc--
Q 017640 155 KSGDEVILTVAE-HH-SAIVPWQLVAQKTGANLKFLNLNDDESPDLD-----KLKEMLSRKTKLVVIHHISNMLASIL-- 225 (368)
Q Consensus 155 ~~gd~vl~~~~~-~~-s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~-----~l~~~l~~~~~~v~~~~~~n~tG~~~-- 225 (368)
+.|..|++.+.+ |. +....+..+++..|..+...... .|+. .++.+...+-.+|++..+....-...
T Consensus 98 ~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~~~----~dp~~~~~~~l~~~~~~~~D~ViIDT~G~~~~d~~~~ 173 (272)
T TIGR00064 98 KQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQKEG----ADPAAVAFDAIQKAKARNIDVVLIDTAGRLQNKVNLM 173 (272)
T ss_pred hcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCCCC----CCHHHHHHHHHHHHHHCCCCEEEEeCCCCCcchHHHH
Confidence 455555544433 32 23445666677777554433221 1332 23333344567888887743221111
Q ss_pred -CHHHHHHHHH------hcCCEEEEecCC
Q 017640 226 -PIEEIVHWSH------DVGAKVLVDACQ 247 (368)
Q Consensus 226 -~l~~i~~l~~------~~g~~li~D~a~ 247 (368)
.++++.+.++ .+++++++|+..
T Consensus 174 ~el~~~~~~~~~~~~~~~~~~~LVl~a~~ 202 (272)
T TIGR00064 174 DELKKIKRVIKKVDKDAPDEVLLVLDATT 202 (272)
T ss_pred HHHHHHHHHHhcccCCCCceEEEEEECCC
Confidence 1445555565 567899999864
No 486
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=32.81 E-value=47 Score=29.47 Aligned_cols=29 Identities=21% Similarity=0.365 Sum_probs=17.2
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV 164 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~ 164 (368)
.|.+-.|++++-.++-. + .+.|..++++-
T Consensus 4 ~IlvlgGT~egr~la~~-L----~~~g~~v~~Sv 32 (248)
T PRK08057 4 RILLLGGTSEARALARA-L----AAAGVDIVLSL 32 (248)
T ss_pred eEEEEechHHHHHHHHH-H----HhCCCeEEEEE
Confidence 56677777787776653 2 23455555543
No 487
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=32.45 E-value=1.2e+02 Score=27.06 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=36.3
Q ss_pred HHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC-----HHHHHHHHHhcCCEEEEecC
Q 017640 179 QKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP-----IEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 179 ~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~-----l~~i~~l~~~~g~~li~D~a 246 (368)
+.+.-+.+.-|...... +.+.++..+ ++.-++++-.. .|. .| +++|.+.+++.++++++|+-
T Consensus 74 KsYsPdLIVHP~l~~~~-av~~i~k~L-~RlhavVIGPG---LGR-dp~~~k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 74 KSYSPDLIVHPVLDQEN-AVDIIEKLL-QRLHAVVIGPG---LGR-DPAILKEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred hhcCCceeecccccCCc-hHhHHHHHH-hheeEEEECCC---CCC-CHHHHHHHHHHHHHHhcCCCcEEEcCC
Confidence 34455555545432111 344455444 34445555444 344 33 78899999999999999976
No 488
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=31.94 E-value=3.5e+02 Score=23.71 Aligned_cols=84 Identities=10% Similarity=0.125 Sum_probs=44.1
Q ss_pred CEEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC--HHHHHHH
Q 017640 158 DEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP--IEEIVHW 233 (368)
Q Consensus 158 d~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~--l~~i~~l 233 (368)
|.|++.+ .+.......+...++..|.++...=. +.- +.+.++..+.....++++ ..++-||..++ +.+..+.
T Consensus 103 dgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~v~-p~T--~~e~l~~~~~~~~~~l~m-sv~~~~g~~~~~~~~~~i~~ 178 (244)
T PRK13125 103 DGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFFTS-PKF--PDLLIHRLSKLSPLFIYY-GLRPATGVPLPVSVERNIKR 178 (244)
T ss_pred CEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEEEC-CCC--CHHHHHHHHHhCCCEEEE-EeCCCCCCCchHHHHHHHHH
Confidence 5677664 22122333466677888887644322 211 466777776655555555 56666777555 3323333
Q ss_pred HHhc--CCEEEEec
Q 017640 234 SHDV--GAKVLVDA 245 (368)
Q Consensus 234 ~~~~--g~~li~D~ 245 (368)
+++. +..+++|.
T Consensus 179 lr~~~~~~~i~v~g 192 (244)
T PRK13125 179 VRNLVGNKYLVVGF 192 (244)
T ss_pred HHHhcCCCCEEEeC
Confidence 3332 34455554
No 489
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=31.72 E-value=1.2e+02 Score=23.16 Aligned_cols=47 Identities=13% Similarity=0.102 Sum_probs=24.2
Q ss_pred CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCE
Q 017640 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK 240 (368)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~ 240 (368)
++++++++++.-+...+.|+-..+.+........+++.+.|++.|+-
T Consensus 13 ~Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~ 59 (110)
T PF04273_consen 13 GQPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQ 59 (110)
T ss_dssp CS--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-E
T ss_pred CCCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCe
Confidence 56677777766555666666666655443333466777777777754
No 490
>TIGR00268 conserved hypothetical protein TIGR00268. The N-terminal region of the model shows similarity to Argininosuccinate synthase proteins using PSI-blast and using the recognize protein identification server.
Probab=31.67 E-value=3.3e+02 Score=23.98 Aligned_cols=98 Identities=14% Similarity=0.217 Sum_probs=53.9
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCc----ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHH----SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS 206 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~----s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~ 206 (368)
-++..+||..+..++..+.. . |..|+...-.++ ........+++..|++...++.++ +...+.
T Consensus 15 vlVa~SGGvDSs~ll~la~~---~--g~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~ii~~~~--------~~~~~~ 81 (252)
T TIGR00268 15 VLIAYSGGVDSSLLAAVCSD---A--GTEVLAITVVSPSISPRELEDAIIIAKEIGVNHEFVKIDK--------MINPFR 81 (252)
T ss_pred EEEEecCcHHHHHHHHHHHH---h--CCCEEEEEecCCCCCHHHHHHHHHHHHHcCCCEEEEEcHH--------HHHHHH
Confidence 45666887777766665541 2 443332222222 123445678888999888777641 111121
Q ss_pred cCce-EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 207 RKTK-LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 207 ~~~~-~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
.++. ...+|. ..-...+.++|+++|+..|+|+.+.
T Consensus 82 ~n~~~~c~~ck-------~~~~~~l~~~A~~~g~~~I~~G~n~ 117 (252)
T TIGR00268 82 ANVEERCYFCK-------KMVLSILVKEAEKRGYDVVVDGTNA 117 (252)
T ss_pred hCCCcccchhh-------HHHHHHHHHHHHHcCCCEEEECCCC
Confidence 1110 000000 0115678889999999999999876
No 491
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=31.58 E-value=4.9e+02 Score=25.28 Aligned_cols=130 Identities=18% Similarity=0.153 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHHHcCCC--------CCCcEEEe----CCHHHHHHHHHHHccCCCCCCCCEEEEcCC-CC-cccHHHHHH
Q 017640 111 DEYELARKKVAAFINAS--------DSGEIVFT----KNATEAINLVAYSWGLSNLKSGDEVILTVA-EH-HSAIVPWQL 176 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~--------~~~~v~~t----~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~-~~-~s~~~~~~~ 176 (368)
..++.+.+.+.+.++.. .+..|+++ +|=|.....++..+ .+.|..|.+.+. .| ++....+..
T Consensus 69 ~~~~~v~~~L~~~l~~~~~~~~~~~~p~vI~lvG~~GsGKTTtaakLA~~L----~~~g~kV~lV~~D~~R~aa~eQL~~ 144 (437)
T PRK00771 69 HVIKIVYEELVKLLGEETEPLVLPLKPQTIMLVGLQGSGKTTTAAKLARYF----KKKGLKVGLVAADTYRPAAYDQLKQ 144 (437)
T ss_pred HHHHHHHHHHHHHhCCCccccccCCCCeEEEEECCCCCcHHHHHHHHHHHH----HHcCCeEEEecCCCCCHHHHHHHHH
Confidence 44566777777877753 12234433 23244443344444 344545444433 33 233455666
Q ss_pred HHHHcCCEEEEEeCCCCCCCCHHH-HHHhccc--CceEEEEcccccccccccCHH---HHHHHHHhcCCEEEEecCCc
Q 017640 177 VAQKTGANLKFLNLNDDESPDLDK-LKEMLSR--KTKLVVIHHISNMLASILPIE---EIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 177 ~~~~~g~~v~~v~~~~~~~~d~~~-l~~~l~~--~~~~v~~~~~~n~tG~~~~l~---~i~~l~~~~g~~li~D~a~~ 248 (368)
+++..|+.+...+.. .|+.. +.+++.. ...+|++..+....-...-++ .+.+++....+++++|+..+
T Consensus 145 la~~~gvp~~~~~~~----~d~~~i~~~al~~~~~~DvVIIDTAGr~~~d~~lm~El~~l~~~~~pdevlLVvda~~g 218 (437)
T PRK00771 145 LAEKIGVPFYGDPDN----KDAVEIAKEGLEKFKKADVIIVDTAGRHALEEDLIEEMKEIKEAVKPDEVLLVIDATIG 218 (437)
T ss_pred HHHHcCCcEEecCCc----cCHHHHHHHHHHHhhcCCEEEEECCCcccchHHHHHHHHHHHHHhcccceeEEEecccc
Confidence 777777655432211 13322 3333321 236777777622210000133 44445556789999997654
No 492
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=31.42 E-value=77 Score=26.31 Aligned_cols=45 Identities=22% Similarity=0.390 Sum_probs=25.6
Q ss_pred HHHHHHhccc--CceEEEEcccccccccccC--------HHHHHHHHHhcCCEEE
Q 017640 198 LDKLKEMLSR--KTKLVVIHHISNMLASILP--------IEEIVHWSHDVGAKVL 242 (368)
Q Consensus 198 ~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~--------l~~i~~l~~~~g~~li 242 (368)
++.+++.+.. ++.+|++.+..+..+.-.. +..+.++|+++|+.++
T Consensus 129 ~~~l~~~~~~~~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi 183 (193)
T PF13481_consen 129 LEELEAALKELYGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVI 183 (193)
T ss_dssp HHHHHHHHTT----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEE
T ss_pred HHHHHHHHhhcCCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEE
Confidence 4556666654 5789999988777664111 5677888889987655
No 493
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=31.33 E-value=1.4e+02 Score=29.30 Aligned_cols=80 Identities=16% Similarity=0.264 Sum_probs=47.7
Q ss_pred cEEEeCCHHHH---HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc--CCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 131 EIVFTKNATEA---INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 131 ~v~~t~g~t~a---~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~--g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
.|+|+.-.+-= ....+..+ ...|...|++.+|+++.- ..++-.. -.+..++| -+..++...+.+.+
T Consensus 392 cvvf~~H~SlRfgdv~h~~e~~---g~sp~NsvI~tdpD~~~~----~vl~PfrpLamK~i~cp--idtrlnfqql~kLl 462 (653)
T KOG1138|consen 392 CVVFMGHPSLRFGDVVHFLECW---GLSPKNSVIFTDPDFSYL----LVLAPFRPLAMKIIYCP--IDTRLNFQQLPKLL 462 (653)
T ss_pred eeEecCCcchhhhHHHHHHHHh---cCCCCCceEEeCCCCchh----hhhcCCccccceeEecc--ccccccHHHHHHHH
Confidence 67777654322 22334444 366778899999987763 2222222 33444554 45667888888877
Q ss_pred cc-CceEEEEccccc
Q 017640 206 SR-KTKLVVIHHISN 219 (368)
Q Consensus 206 ~~-~~~~v~~~~~~n 219 (368)
.. +++.++++...|
T Consensus 463 kelqPk~vlcpeayt 477 (653)
T KOG1138|consen 463 KELQPKIVLCPEAYT 477 (653)
T ss_pred HHhCCCEEEChhhhc
Confidence 65 677777666544
No 494
>cd01575 PBP1_GntR Ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding,
Probab=30.81 E-value=1.7e+02 Score=25.27 Aligned_cols=47 Identities=17% Similarity=0.194 Sum_probs=21.2
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
....+...++..|.++.....+.+..-..+.++..+..+...|++..
T Consensus 17 ~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~ 63 (268)
T cd01575 17 VLQGISDVLEAAGYQLLLGNTGYSPEREEELLRTLLSRRPAGLILTG 63 (268)
T ss_pred HHHHHHHHHHHcCCEEEEecCCCCchhHHHHHHHHHHcCCCEEEEeC
Confidence 33445555566666665544332211112233444444555555543
No 495
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=30.77 E-value=5.3e+02 Score=25.37 Aligned_cols=104 Identities=13% Similarity=0.161 Sum_probs=60.7
Q ss_pred CcEEEeCCHHHHHHHHHHHccCCCCCCCCE-EEEc-CCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 130 GEIVFTKNATEAINLVAYSWGLSNLKSGDE-VILT-VAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~-vl~~-~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
.++++|-|++..++.++.-. + ...+.=. |++. .|.+-+- ..++.+ ...|.+..++-++ -++.+- .+
T Consensus 360 gdviltyg~s~vV~~ill~A-~-~~~k~frVvVVDSRP~~EG~-~~lr~L-v~~GinctYv~I~-----a~syim---~e 427 (556)
T KOG1467|consen 360 GDVLLTYGSSSVVNMILLEA-K-ELGKKFRVVVVDSRPNLEGR-KLLRRL-VDRGINCTYVLIN-----AASYIM---LE 427 (556)
T ss_pred CCEEEEecchHHHHHHHHHH-H-HhCcceEEEEEeCCCCcchH-HHHHHH-HHcCCCeEEEEeh-----hHHHHH---Hh
Confidence 48888887777777766543 1 1223323 3333 4444442 334444 3458888777765 222222 23
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEec
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDA 245 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~ 245 (368)
-++++.=.|.--.-|.++. -..|+=.+++|+++||+=+
T Consensus 428 vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCC 468 (556)
T KOG1467|consen 428 VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCC 468 (556)
T ss_pred cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEe
Confidence 4566666666666788888 4566667788999877543
No 496
>cd06299 PBP1_LacI_like_13 Ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia. This group includes the ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia. This regulatory protein is a member of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial trans
Probab=30.60 E-value=1.7e+02 Score=25.44 Aligned_cols=48 Identities=17% Similarity=0.180 Sum_probs=21.0
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
.....+...++..|.++..+....+..-..+.++..+..+...|++..
T Consensus 16 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 63 (265)
T cd06299 16 SLATAIQDAASAAGYSTIIGNSDENPETENRYLDNLLSQRVDGIIVVP 63 (265)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 344455555566666665554322111111223333444555555543
No 497
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=30.50 E-value=2.7e+02 Score=23.78 Aligned_cols=41 Identities=10% Similarity=0.195 Sum_probs=28.9
Q ss_pred CCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 195 SPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
-+|.+.++++++.....++.++. -+++.+.|+++|++.+--
T Consensus 63 Vl~~e~a~~ai~aGA~FivSP~~---------~~~vi~~a~~~~i~~iPG 103 (201)
T PRK06015 63 ILNAKQFEDAAKAGSRFIVSPGT---------TQELLAAANDSDVPLLPG 103 (201)
T ss_pred CcCHHHHHHHHHcCCCEEECCCC---------CHHHHHHHHHcCCCEeCC
Confidence 34777777777766666664443 468889999999877643
No 498
>cd06324 PBP1_ABC_sugar_binding_like_13 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=30.32 E-value=1.4e+02 Score=26.82 Aligned_cols=72 Identities=21% Similarity=0.277 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
.....++..++..|.++..+..+.+..-..+.++..+.. ++..|++.... + ..+++.+.+++.|++++ +|.
T Consensus 17 ~~~~gi~~~~~~~g~~v~~~~~~~~~~~~~~~i~~~~~~~~~vdgiIi~~~~-~-----~~~~~~~~~~~~giPvV~~~~ 90 (305)
T cd06324 17 SVARFMQAAADDLGIELEVLYAERDRFLMLQQARTILQRPDKPDALIFTNEK-S-----VAPELLRLAEGAGVKLFLVNS 90 (305)
T ss_pred HHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHhccCCCEEEEcCCc-c-----chHHHHHHHHhCCCeEEEEec
Confidence 344566777778888887775443221123445666666 78887774321 1 24455566778887554 664
Q ss_pred C
Q 017640 246 C 246 (368)
Q Consensus 246 a 246 (368)
.
T Consensus 91 ~ 91 (305)
T cd06324 91 G 91 (305)
T ss_pred C
Confidence 3
No 499
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=30.29 E-value=3e+02 Score=25.68 Aligned_cols=51 Identities=14% Similarity=0.214 Sum_probs=33.1
Q ss_pred CHHHHHHhcccCceEE-------EEcccccccccccC----HHHHHHHHHhcCCEEEEecCC
Q 017640 197 DLDKLKEMLSRKTKLV-------VIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 197 d~~~l~~~l~~~~~~v-------~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~ 247 (368)
+.+..++++.....+| .+|...-.+|.-.| +.+.++.++++|+.+|.|+--
T Consensus 161 T~e~a~~Li~aGAD~vKVGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi 222 (346)
T PRK05096 161 TGEMVEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGC 222 (346)
T ss_pred CHHHHHHHHHcCCCEEEEcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCc
Confidence 5666666665432222 13333456777777 567777888899999999863
No 500
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=30.17 E-value=4e+02 Score=23.83 Aligned_cols=64 Identities=16% Similarity=0.196 Sum_probs=37.1
Q ss_pred HHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcC-CEEEEecC
Q 017640 176 LVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVG-AKVLVDAC 246 (368)
Q Consensus 176 ~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g-~~li~D~a 246 (368)
...+..|.++..++-..++.-|.+++.+.+.. ++.++++.+.. .+-+. .+..++.+ .++++|+-
T Consensus 47 ~~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~------~~~~~-~~~~k~~~~~l~~iDD~ 112 (279)
T TIGR03590 47 DLLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYG------LDADW-EKLIKEFGRKILVIDDL 112 (279)
T ss_pred HHHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCC------CCHHH-HHHHHHhCCeEEEEecC
Confidence 33455577776666443344467777777765 67899998872 23232 23344445 45666654
Done!