Query 017640
Match_columns 368
No_of_seqs 204 out of 2469
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 17:42:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017640.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017640hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kmj_A Selenocysteine lyase; p 100.0 3.5E-40 1.2E-44 313.3 30.3 317 49-366 6-323 (406)
2 1t3i_A Probable cysteine desul 100.0 1.6E-39 5.4E-44 310.3 32.1 324 42-366 4-327 (420)
3 1elu_A L-cysteine/L-cystine C- 100.0 1.1E-36 3.6E-41 287.9 33.1 305 49-366 5-319 (390)
4 3cai_A Possible aminotransfera 100.0 3E-37 1E-41 293.6 28.8 297 48-366 13-325 (406)
5 3lvm_A Cysteine desulfurase; s 100.0 1.2E-36 4.2E-41 290.8 29.4 285 65-366 20-306 (423)
6 3e9k_A Kynureninase; kynurenin 100.0 6.4E-37 2.2E-41 296.8 24.1 312 49-363 40-375 (465)
7 4hvk_A Probable cysteine desul 100.0 3.6E-36 1.2E-40 283.0 26.6 278 68-366 1-278 (382)
8 4eb5_A Probable cysteine desul 100.0 6.6E-36 2.3E-40 281.6 26.1 273 69-366 2-278 (382)
9 3vax_A Putative uncharacterize 100.0 2.6E-35 8.9E-40 279.5 29.3 278 65-366 18-305 (400)
10 1eg5_A Aminotransferase; PLP-d 100.0 1.4E-34 4.8E-39 272.6 33.1 277 69-366 3-281 (384)
11 3a9z_A Selenocysteine lyase; P 100.0 5E-35 1.7E-39 280.6 28.9 289 52-365 10-327 (432)
12 2z9v_A Aspartate aminotransfer 100.0 2.3E-34 7.7E-39 272.3 27.4 286 54-367 2-292 (392)
13 1qz9_A Kynureninase; kynurenin 100.0 3.7E-34 1.3E-38 273.1 27.3 300 46-363 14-324 (416)
14 2dr1_A PH1308 protein, 386AA l 100.0 7.2E-34 2.5E-38 268.1 25.9 294 45-367 4-303 (386)
15 1vjo_A Alanine--glyoxylate ami 100.0 2.8E-33 9.7E-38 265.0 26.4 297 44-367 16-317 (393)
16 2huf_A Alanine glyoxylate amin 100.0 5.5E-33 1.9E-37 262.9 26.7 284 66-367 17-305 (393)
17 3e77_A Phosphoserine aminotran 100.0 2E-34 6.8E-39 269.5 16.3 279 67-367 12-296 (377)
18 3qm2_A Phosphoserine aminotran 100.0 2.7E-34 9.4E-39 270.0 11.3 273 68-363 27-307 (386)
19 3nnk_A Ureidoglycine-glyoxylat 100.0 4.5E-32 1.6E-36 258.0 26.7 282 69-367 14-312 (411)
20 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.4E-32 4.9E-37 257.9 21.7 271 66-366 7-290 (371)
21 3isl_A Purine catabolism prote 100.0 4.7E-32 1.6E-36 258.3 24.4 276 74-367 17-312 (416)
22 1iug_A Putative aspartate amin 100.0 1E-31 3.5E-36 250.2 24.8 268 70-366 3-273 (352)
23 2ch1_A 3-hydroxykynurenine tra 100.0 1.9E-31 6.4E-36 252.6 25.8 280 66-367 16-304 (396)
24 3kgw_A Alanine-glyoxylate amin 100.0 1.5E-31 5E-36 252.7 25.0 281 70-367 25-309 (393)
25 3zrp_A Serine-pyruvate aminotr 100.0 2.3E-31 7.9E-36 250.6 24.7 273 72-367 6-288 (384)
26 2yrr_A Aminotransferase, class 100.0 1.2E-31 4.2E-36 249.5 22.3 271 71-366 3-276 (353)
27 3ffr_A Phosphoserine aminotran 100.0 5.8E-32 2E-36 252.7 19.5 281 70-367 6-289 (362)
28 3m5u_A Phosphoserine aminotran 100.0 4.4E-31 1.5E-35 246.1 18.2 271 69-366 6-283 (361)
29 3f0h_A Aminotransferase; RER07 100.0 5.6E-30 1.9E-34 240.8 23.4 272 72-363 23-297 (376)
30 1m32_A 2-aminoethylphosphonate 100.0 3.7E-29 1.3E-33 233.8 26.3 277 68-367 5-288 (366)
31 2bkw_A Alanine-glyoxylate amin 100.0 2.3E-29 7.8E-34 237.1 24.7 281 70-366 7-303 (385)
32 2c0r_A PSAT, phosphoserine ami 100.0 1E-29 3.5E-34 238.0 21.0 271 67-364 3-283 (362)
33 1w23_A Phosphoserine aminotran 100.0 3.8E-30 1.3E-34 240.5 17.7 273 69-365 4-283 (360)
34 3f9t_A TDC, L-tyrosine decarbo 100.0 9.3E-29 3.2E-33 233.5 27.2 270 69-367 33-331 (397)
35 3ly1_A Putative histidinol-pho 100.0 8.2E-29 2.8E-33 231.0 24.8 256 65-366 15-285 (354)
36 3ffh_A Histidinol-phosphate am 100.0 6.6E-29 2.3E-33 232.5 23.3 256 66-366 32-298 (363)
37 1b5p_A Protein (aspartate amin 100.0 1.8E-28 6.2E-33 231.6 25.6 261 66-367 31-313 (385)
38 1gd9_A Aspartate aminotransfer 100.0 1.7E-28 5.9E-33 231.8 25.3 262 67-367 27-311 (389)
39 3euc_A Histidinol-phosphate am 100.0 1.2E-28 4E-33 231.2 23.9 256 66-366 30-299 (367)
40 3dyd_A Tyrosine aminotransfera 100.0 8.3E-29 2.8E-33 237.2 22.3 277 51-366 39-346 (427)
41 1v2d_A Glutamine aminotransfer 100.0 6.1E-29 2.1E-33 234.4 20.5 260 67-367 26-300 (381)
42 3get_A Histidinol-phosphate am 100.0 9.8E-29 3.4E-33 231.5 21.5 254 66-366 30-299 (365)
43 2z61_A Probable aspartate amin 100.0 2E-28 7E-33 229.9 22.3 253 66-366 29-298 (370)
44 1o4s_A Aspartate aminotransfer 100.0 1.9E-28 6.4E-33 231.8 20.8 260 65-367 40-319 (389)
45 1j32_A Aspartate aminotransfer 100.0 5.4E-28 1.9E-32 228.3 23.5 267 66-367 30-314 (388)
46 4dq6_A Putative pyridoxal phos 100.0 3.5E-28 1.2E-32 229.6 21.4 263 66-366 32-317 (391)
47 3p1t_A Putative histidinol-pho 100.0 1.4E-27 4.6E-32 221.1 24.4 251 66-367 16-271 (337)
48 1u08_A Hypothetical aminotrans 100.0 4.5E-28 1.6E-32 228.8 21.4 259 66-363 30-309 (386)
49 3dzz_A Putative pyridoxal 5'-p 100.0 3.5E-28 1.2E-32 229.6 20.4 266 65-366 26-313 (391)
50 3g0t_A Putative aminotransfera 100.0 8.5E-28 2.9E-32 230.6 21.9 273 65-363 43-354 (437)
51 3fdb_A Beta C-S lyase, putativ 100.0 7.7E-28 2.6E-32 226.2 20.8 257 65-366 22-301 (377)
52 2z67_A O-phosphoseryl-tRNA(SEC 100.0 8.4E-29 2.9E-33 239.1 14.5 277 49-364 69-370 (456)
53 3kax_A Aminotransferase, class 100.0 3.5E-28 1.2E-32 229.0 18.4 263 66-366 24-309 (383)
54 3nra_A Aspartate aminotransfer 100.0 2.8E-28 9.6E-33 231.6 17.8 267 67-367 40-330 (407)
55 3mad_A Sphingosine-1-phosphate 100.0 6.4E-27 2.2E-31 229.3 27.9 265 79-367 108-400 (514)
56 1svv_A Threonine aldolase; str 100.0 4.4E-28 1.5E-32 226.0 18.6 261 66-367 13-290 (359)
57 3a2b_A Serine palmitoyltransfe 100.0 1.7E-27 5.7E-32 225.8 22.8 261 66-367 43-317 (398)
58 2jis_A Cysteine sulfinic acid 100.0 4E-27 1.4E-31 230.7 26.3 282 69-367 110-424 (515)
59 3hdo_A Histidinol-phosphate am 100.0 2E-27 7E-32 222.3 22.8 250 65-363 25-284 (360)
60 2o1b_A Aminotransferase, class 100.0 1.2E-27 4.2E-32 227.4 21.6 260 66-366 47-328 (404)
61 2w8t_A SPT, serine palmitoyltr 100.0 6.4E-27 2.2E-31 224.1 26.2 257 66-363 64-335 (427)
62 2o0r_A RV0858C (N-succinyldiam 100.0 7.1E-28 2.4E-32 229.4 19.3 259 66-363 25-306 (411)
63 3ke3_A Putative serine-pyruvat 100.0 2.4E-27 8.3E-32 223.5 22.2 252 104-367 28-297 (379)
64 3mc6_A Sphingosine-1-phosphate 100.0 4.2E-27 1.4E-31 229.7 24.5 269 79-367 76-369 (497)
65 3b46_A Aminotransferase BNA3; 100.0 1.9E-27 6.3E-32 229.2 21.6 263 66-366 57-352 (447)
66 1xi9_A Putative transaminase; 100.0 8.4E-28 2.9E-32 228.6 18.9 260 66-366 38-326 (406)
67 2x5d_A Probable aminotransfera 100.0 1.9E-27 6.5E-32 226.6 21.1 264 65-367 36-321 (412)
68 3h14_A Aminotransferase, class 100.0 2.4E-27 8.1E-32 224.2 21.6 255 65-363 30-302 (391)
69 3cq5_A Histidinol-phosphate am 100.0 1.4E-26 4.9E-31 217.3 26.5 254 69-363 33-301 (369)
70 1bs0_A Protein (8-amino-7-oxon 100.0 4.8E-27 1.6E-31 221.5 22.9 259 67-363 40-309 (384)
71 3e2y_A Kynurenine-oxoglutarate 100.0 1.9E-27 6.3E-32 226.2 20.0 259 66-363 23-320 (410)
72 3ftb_A Histidinol-phosphate am 100.0 6.3E-27 2.1E-31 218.7 23.1 252 65-366 25-289 (361)
73 1yiz_A Kynurenine aminotransfe 100.0 4.2E-27 1.5E-31 225.3 22.2 263 66-363 37-335 (429)
74 2dou_A Probable N-succinyldiam 100.0 1.3E-27 4.3E-32 225.0 18.2 261 65-363 24-303 (376)
75 3fvs_A Kynurenine--oxoglutarat 100.0 2.5E-27 8.5E-32 226.3 20.5 266 66-363 28-327 (422)
76 1bw0_A TAT, protein (tyrosine 100.0 1.4E-27 4.9E-32 227.6 18.7 266 66-366 33-335 (416)
77 2bwn_A 5-aminolevulinate synth 100.0 1.5E-27 5E-32 226.4 18.6 282 49-367 27-324 (401)
78 3l8a_A METC, putative aminotra 100.0 3.3E-27 1.1E-31 225.6 20.9 265 66-366 61-346 (421)
79 1c7n_A Cystalysin; transferase 100.0 4E-27 1.4E-31 223.2 21.2 261 66-367 31-318 (399)
80 3tqx_A 2-amino-3-ketobutyrate 100.0 8.1E-27 2.8E-31 220.8 22.6 261 66-366 43-320 (399)
81 1d2f_A MALY protein; aminotran 100.0 1.5E-26 5E-31 218.7 23.9 261 66-367 28-314 (390)
82 1wyu_B Glycine dehydrogenase s 100.0 2.1E-26 7.1E-31 223.4 25.0 286 66-367 66-366 (474)
83 3jtx_A Aminotransferase; NP_28 99.9 8.7E-27 3E-31 220.6 21.4 262 65-363 29-317 (396)
84 1lc5_A COBD, L-threonine-O-3-p 99.9 6.7E-27 2.3E-31 219.1 20.1 254 66-366 24-290 (364)
85 2dgk_A GAD-beta, GADB, glutama 99.9 3.8E-26 1.3E-30 220.3 26.0 266 77-367 52-350 (452)
86 2okj_A Glutamate decarboxylase 99.9 6.9E-26 2.4E-30 221.4 27.5 283 69-367 94-409 (504)
87 1fg7_A Histidinol phosphate am 99.9 6.9E-27 2.3E-31 218.5 19.5 217 114-364 61-287 (356)
88 1fc4_A 2-amino-3-ketobutyrate 99.9 3.1E-26 1E-30 217.2 23.9 260 66-367 45-322 (401)
89 2zyj_A Alpha-aminodipate amino 99.9 2.7E-27 9.2E-32 224.4 15.4 260 66-363 32-311 (397)
90 1wyu_A Glycine dehydrogenase ( 99.9 8.7E-27 3E-31 223.9 18.9 252 105-367 102-367 (438)
91 2zc0_A Alanine glyoxylate tran 99.9 4E-26 1.4E-30 216.8 22.9 263 66-366 34-326 (407)
92 2gb3_A Aspartate aminotransfer 99.9 1.2E-26 4E-31 221.0 19.0 260 65-367 42-320 (409)
93 2fnu_A Aminotransferase; prote 99.9 1.4E-26 4.8E-31 217.4 19.1 256 76-366 8-270 (375)
94 1rv3_A Serine hydroxymethyltra 99.9 2.4E-27 8.2E-32 230.4 14.3 286 67-367 45-347 (483)
95 3ezs_A Aminotransferase ASPB; 99.9 1E-26 3.4E-31 218.6 18.0 257 67-361 24-301 (376)
96 3ele_A Amino transferase; RER0 99.9 4.1E-26 1.4E-30 216.2 21.9 209 66-288 35-268 (398)
97 3aow_A Putative uncharacterize 99.9 4.2E-26 1.5E-30 219.7 22.2 261 66-363 76-363 (448)
98 3hbx_A GAD 1, glutamate decarb 99.9 8.5E-26 2.9E-30 220.4 24.2 275 69-367 58-365 (502)
99 2qma_A Diaminobutyrate-pyruvat 99.9 6.5E-26 2.2E-30 221.2 22.4 284 69-367 102-417 (497)
100 1vp4_A Aminotransferase, putat 99.9 2.7E-26 9.3E-31 219.5 18.8 261 66-363 43-334 (425)
101 3op7_A Aminotransferase class 99.9 5.5E-26 1.9E-30 213.6 19.7 222 114-366 66-298 (375)
102 3kki_A CAI-1 autoinducer synth 99.9 1.5E-25 5.3E-30 213.1 22.9 257 66-363 59-327 (409)
103 1uu1_A Histidinol-phosphate am 99.9 1.7E-25 5.8E-30 207.2 22.3 245 66-366 19-274 (335)
104 1iay_A ACC synthase 2, 1-amino 99.9 5.3E-26 1.8E-30 217.7 19.2 259 66-366 36-345 (428)
105 1e5e_A MGL, methionine gamma-l 99.9 1.2E-25 4.3E-30 213.5 20.8 216 110-363 61-281 (404)
106 3vp6_A Glutamate decarboxylase 99.9 5.3E-25 1.8E-29 215.2 25.3 282 70-367 98-412 (511)
107 2rfv_A Methionine gamma-lyase; 99.9 1.8E-25 6.2E-30 212.0 20.7 252 67-362 26-281 (398)
108 2fq6_A Cystathionine beta-lyas 99.9 1.6E-25 5.4E-30 213.1 19.8 170 109-291 80-254 (415)
109 3piu_A 1-aminocyclopropane-1-c 99.9 1.1E-25 3.8E-30 215.9 19.0 267 66-363 38-348 (435)
110 3qgu_A LL-diaminopimelate amin 99.9 1.8E-25 6.3E-30 215.2 20.6 268 65-366 68-366 (449)
111 2fyf_A PSAT, phosphoserine ami 99.9 7.2E-26 2.5E-30 214.7 17.3 265 69-366 41-320 (398)
112 1js3_A DDC;, DOPA decarboxylas 99.9 6.5E-25 2.2E-29 213.6 23.4 282 70-367 76-399 (486)
113 2vi8_A Serine hydroxymethyltra 99.9 5.9E-26 2E-30 215.4 14.8 266 70-366 26-301 (405)
114 1qgn_A Protein (cystathionine 99.9 3.8E-25 1.3E-29 211.8 19.4 176 104-292 107-286 (445)
115 1pff_A Methionine gamma-lyase; 99.9 9.4E-25 3.2E-29 201.7 21.2 168 115-295 2-174 (331)
116 3qhx_A Cystathionine gamma-syn 99.9 4.8E-25 1.6E-29 208.7 19.5 170 109-291 64-237 (392)
117 3fkd_A L-threonine-O-3-phospha 99.9 3.5E-25 1.2E-29 206.2 18.2 246 66-366 15-270 (350)
118 3ei9_A LL-diaminopimelate amin 99.9 3.2E-25 1.1E-29 212.5 18.2 263 66-366 56-354 (432)
119 1gc0_A Methionine gamma-lyase; 99.9 4.8E-25 1.6E-29 209.1 18.8 251 69-363 29-283 (398)
120 3asa_A LL-diaminopimelate amin 99.9 6.8E-25 2.3E-29 208.1 19.6 265 66-363 33-315 (400)
121 3uwc_A Nucleotide-sugar aminot 99.9 5.3E-25 1.8E-29 206.7 18.4 244 83-365 21-270 (374)
122 2x5f_A Aspartate_tyrosine_phen 99.9 4.9E-26 1.7E-30 218.0 11.1 258 66-361 47-352 (430)
123 2r2n_A Kynurenine/alpha-aminoa 99.9 1.5E-24 5.2E-29 207.4 21.3 225 110-365 81-343 (425)
124 3tcm_A Alanine aminotransferas 99.9 7.8E-25 2.7E-29 213.6 19.2 252 79-367 107-407 (500)
125 3n0l_A Serine hydroxymethyltra 99.9 4.5E-25 1.5E-29 210.1 16.9 266 68-366 27-303 (417)
126 3ndn_A O-succinylhomoserine su 99.9 5.5E-25 1.9E-29 209.5 17.4 167 109-288 79-248 (414)
127 3t18_A Aminotransferase class 99.9 1.2E-24 4.1E-29 207.2 19.4 266 66-367 37-349 (413)
128 1v72_A Aldolase; PLP-dependent 99.9 1.4E-25 4.7E-30 209.0 12.6 260 66-366 7-286 (356)
129 3frk_A QDTB; aminotransferase, 99.9 1.5E-24 5.2E-29 203.7 19.7 246 79-363 15-267 (373)
130 3fsl_A Aromatic-amino-acid ami 99.9 1.1E-24 3.9E-29 206.1 18.1 268 66-364 26-334 (397)
131 1o69_A Aminotransferase; struc 99.9 6E-24 2E-28 201.3 23.1 250 79-363 10-266 (394)
132 1cs1_A CGS, protein (cystathio 99.9 8.6E-25 2.9E-29 206.5 17.2 215 110-363 51-269 (386)
133 3k40_A Aromatic-L-amino-acid d 99.9 2.2E-24 7.5E-29 209.0 20.1 279 70-367 76-396 (475)
134 3rq1_A Aminotransferase class 99.9 2.3E-24 8E-29 205.5 19.7 265 66-367 38-351 (418)
135 2cb1_A O-acetyl homoserine sul 99.9 3.5E-24 1.2E-28 204.1 20.8 162 110-284 55-218 (412)
136 3jzl_A Putative cystathionine 99.9 1.4E-24 4.9E-29 205.7 17.9 174 113-292 61-252 (409)
137 2x3l_A ORN/Lys/Arg decarboxyla 99.9 4E-25 1.4E-29 212.6 14.2 215 111-359 57-283 (446)
138 4f4e_A Aromatic-amino-acid ami 99.9 3.5E-24 1.2E-28 204.6 20.6 265 66-363 49-355 (420)
139 3if2_A Aminotransferase; YP_26 99.9 2.2E-25 7.7E-30 214.2 12.3 221 66-293 31-300 (444)
140 2oga_A Transaminase; PLP-depen 99.9 1.6E-23 5.5E-28 198.6 24.7 250 79-367 42-298 (399)
141 4e1o_A HDC, histidine decarbox 99.9 1.1E-23 3.6E-28 204.7 23.9 281 70-368 81-404 (481)
142 3acz_A Methionine gamma-lyase; 99.9 4E-24 1.4E-28 202.1 20.0 170 110-294 58-233 (389)
143 3nyt_A Aminotransferase WBPE; 99.9 9E-24 3.1E-28 198.1 21.5 247 78-363 13-266 (367)
144 7aat_A Aspartate aminotransfer 99.9 4.6E-24 1.6E-28 202.3 19.3 263 67-363 29-336 (401)
145 2dkj_A Serine hydroxymethyltra 99.9 4.4E-25 1.5E-29 209.5 12.2 282 45-366 9-302 (407)
146 1vef_A Acetylornithine/acetyl- 99.9 6.6E-24 2.3E-28 200.8 20.1 252 68-363 45-324 (395)
147 3i16_A Aluminum resistance pro 99.9 2.6E-24 9E-29 204.6 17.3 174 113-292 75-269 (427)
148 1n8p_A Cystathionine gamma-lya 99.9 8.6E-25 2.9E-29 207.0 13.8 168 110-292 54-229 (393)
149 2ay1_A Aroat, aromatic amino a 99.9 3E-24 1E-28 203.0 17.1 267 66-364 26-330 (394)
150 1yaa_A Aspartate aminotransfer 99.9 1.8E-24 6.2E-29 205.9 15.6 263 66-364 29-345 (412)
151 3g7q_A Valine-pyruvate aminotr 99.9 3.4E-25 1.2E-29 211.0 10.4 268 66-363 31-325 (417)
152 2eh6_A Acoat, acetylornithine 99.9 5E-23 1.7E-27 193.3 25.0 254 67-363 27-309 (375)
153 3cog_A Cystathionine gamma-lya 99.9 6.4E-24 2.2E-28 201.6 18.9 170 111-294 67-241 (403)
154 3ihj_A Alanine aminotransferas 99.9 1.1E-23 3.9E-28 205.2 21.0 251 80-367 103-406 (498)
155 3meb_A Aspartate aminotransfer 99.9 1.2E-23 4.2E-28 202.5 20.2 226 113-363 96-371 (448)
156 2c81_A Glutamine-2-deoxy-scyll 99.9 1.2E-23 4.2E-28 200.6 20.0 267 76-366 11-289 (418)
157 1mdo_A ARNB aminotransferase; 99.9 1.6E-23 5.4E-28 197.9 20.5 254 79-363 18-280 (393)
158 3dr4_A Putative perosamine syn 99.9 2E-23 6.7E-28 197.4 21.0 264 66-367 22-291 (391)
159 1ajs_A Aspartate aminotransfer 99.9 1.1E-23 3.9E-28 200.3 19.2 264 66-364 30-345 (412)
160 3ruy_A Ornithine aminotransfer 99.9 8.8E-23 3E-27 192.9 25.0 254 69-363 37-322 (392)
161 2aeu_A Hypothetical protein MJ 99.9 4.1E-24 1.4E-28 201.1 15.5 219 67-337 29-254 (374)
162 1b9h_A AHBA synthase, protein 99.9 3.4E-23 1.2E-27 195.4 21.7 251 79-366 15-276 (388)
163 3ri6_A O-acetylhomoserine sulf 99.9 2E-23 6.7E-28 199.4 19.5 162 110-284 81-245 (430)
164 2q7w_A Aspartate aminotransfer 99.9 1E-23 3.5E-28 199.4 17.1 264 66-364 26-333 (396)
165 2po3_A 4-dehydrase; external a 99.9 7E-23 2.4E-27 195.8 23.0 256 71-366 21-283 (424)
166 3hvy_A Cystathionine beta-lyas 99.9 1.2E-23 4.1E-28 200.0 16.8 173 113-292 76-269 (427)
167 3gbx_A Serine hydroxymethyltra 99.9 5E-24 1.7E-28 203.0 14.3 255 77-362 40-307 (420)
168 2ctz_A O-acetyl-L-homoserine s 99.9 4.2E-23 1.4E-27 197.2 20.1 161 110-283 57-221 (421)
169 1jg8_A L-ALLO-threonine aldola 99.9 8.1E-24 2.8E-28 196.6 14.7 206 66-291 3-224 (347)
170 3b8x_A WBDK, pyridoxamine 5-ph 99.9 3.5E-22 1.2E-26 188.7 25.7 262 76-366 10-292 (390)
171 1ibj_A CBL, cystathionine beta 99.9 6.2E-23 2.1E-27 197.9 18.7 166 111-292 133-304 (464)
172 2a7v_A Serine hydroxymethyltra 99.9 3.9E-23 1.3E-27 199.6 17.2 261 75-366 62-356 (490)
173 3b1d_A Betac-S lyase; HET: PLP 99.8 1.4E-25 4.8E-30 212.2 0.0 259 67-366 32-317 (392)
174 3f6t_A Aspartate aminotransfer 99.9 1.9E-23 6.5E-28 205.2 14.8 210 67-291 104-341 (533)
175 2ord_A Acoat, acetylornithine 99.9 5.7E-22 2E-26 187.7 24.3 246 69-363 41-321 (397)
176 3d6k_A Putative aminotransfera 99.9 5.9E-24 2E-28 203.1 10.3 259 67-362 33-332 (422)
177 3bwn_A AT1G70560, L-tryptophan 99.9 2.2E-24 7.4E-29 204.1 6.8 270 53-366 11-304 (391)
178 1s0a_A Adenosylmethionine-8-am 99.9 4.9E-22 1.7E-26 190.2 23.0 268 67-363 42-350 (429)
179 3ju7_A Putative PLP-dependent 99.9 6.1E-22 2.1E-26 186.3 23.0 250 78-365 13-273 (377)
180 3nmy_A Xometc, cystathionine g 99.9 5.8E-23 2E-27 194.6 16.1 216 110-365 66-287 (400)
181 1c4k_A Protein (ornithine deca 99.9 3E-23 1E-27 208.9 14.5 235 112-367 174-443 (730)
182 1sff_A 4-aminobutyrate aminotr 99.9 4.7E-22 1.6E-26 189.9 21.9 246 76-363 55-338 (426)
183 4adb_A Succinylornithine trans 99.9 4.6E-22 1.6E-26 188.7 21.4 248 69-363 40-322 (406)
184 3ppl_A Aspartate aminotransfer 99.9 3.7E-23 1.3E-27 197.8 13.5 172 112-293 79-284 (427)
185 3h7f_A Serine hydroxymethyltra 99.9 1.3E-22 4.6E-27 195.2 16.2 265 67-363 46-321 (447)
186 2vyc_A Biodegradative arginine 99.9 2.8E-22 9.7E-27 203.4 18.9 226 111-365 205-466 (755)
187 4eu1_A Mitochondrial aspartate 99.9 1.3E-22 4.5E-27 192.8 15.3 263 66-363 41-344 (409)
188 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.7E-21 5.7E-26 187.0 22.9 199 66-289 31-239 (437)
189 3ez1_A Aminotransferase MOCR f 99.9 3.1E-22 1E-26 191.1 17.0 211 66-293 25-277 (423)
190 3ecd_A Serine hydroxymethyltra 99.9 3.6E-22 1.2E-26 190.4 17.5 265 69-363 35-309 (425)
191 3ht4_A Aluminum resistance pro 99.9 1.4E-22 4.7E-27 193.6 14.5 175 112-292 66-258 (431)
192 3nx3_A Acoat, acetylornithine 99.9 1.3E-21 4.5E-26 185.0 20.3 252 68-362 36-318 (395)
193 2pb2_A Acetylornithine/succiny 99.9 1.4E-21 4.6E-26 186.7 20.4 248 67-363 56-340 (420)
194 2eo5_A 419AA long hypothetical 99.9 5.6E-21 1.9E-25 182.3 23.7 258 67-363 41-348 (419)
195 1z7d_A Ornithine aminotransfer 99.9 1.2E-20 4.3E-25 180.7 26.1 256 67-363 64-352 (433)
196 3k7y_A Aspartate aminotransfer 99.9 1.4E-20 4.9E-25 178.3 25.2 261 66-361 29-333 (405)
197 3a8u_X Omega-amino acid--pyruv 99.9 2.6E-21 8.9E-26 186.2 20.4 272 67-363 49-368 (449)
198 2oat_A Ornithine aminotransfer 99.9 1.5E-20 5E-25 180.5 25.0 253 67-363 75-363 (439)
199 2ez2_A Beta-tyrosinase, tyrosi 99.9 7.7E-21 2.6E-25 183.2 20.5 252 67-363 41-332 (456)
200 3dxv_A Alpha-amino-epsilon-cap 99.9 1.9E-20 6.4E-25 179.7 22.7 259 69-363 44-339 (439)
201 1ax4_A Tryptophanase; tryptoph 99.9 1.7E-21 6E-26 188.3 14.1 254 67-362 42-341 (467)
202 2zy4_A L-aspartate beta-decarb 99.9 9.6E-21 3.3E-25 186.2 17.0 210 68-290 106-338 (546)
203 3l44_A Glutamate-1-semialdehyd 99.9 2.9E-20 9.8E-25 178.1 19.8 256 67-363 54-343 (434)
204 3n75_A LDC, lysine decarboxyla 99.9 8.9E-21 3E-25 189.5 16.5 221 112-365 196-444 (715)
205 3i4j_A Aminotransferase, class 99.8 1.9E-20 6.7E-25 179.1 18.1 265 68-362 29-335 (430)
206 1zod_A DGD, 2,2-dialkylglycine 99.8 2.1E-20 7.1E-25 179.0 17.6 263 67-363 42-344 (433)
207 2cy8_A D-phgat, D-phenylglycin 99.8 6.4E-20 2.2E-24 176.7 20.9 246 77-363 72-344 (453)
208 3pj0_A LMO0305 protein; struct 99.8 6.1E-21 2.1E-25 178.0 12.6 192 79-292 27-230 (359)
209 2cjg_A L-lysine-epsilon aminot 99.8 3.4E-20 1.1E-24 178.5 17.9 265 67-363 53-371 (449)
210 2epj_A Glutamate-1-semialdehyd 99.8 3E-20 1E-24 178.0 17.3 245 77-363 71-344 (434)
211 3dod_A Adenosylmethionine-8-am 99.8 2.1E-19 7.3E-24 172.9 23.3 270 67-362 43-357 (448)
212 3n5m_A Adenosylmethionine-8-am 99.8 8.4E-19 2.9E-23 168.9 26.7 267 67-363 48-361 (452)
213 3tfu_A Adenosylmethionine-8-am 99.8 3.5E-20 1.2E-24 178.6 17.0 262 69-363 76-379 (457)
214 3gju_A Putative aminotransfera 99.8 3E-19 1E-23 172.4 23.4 267 67-362 50-371 (460)
215 3lws_A Aromatic amino acid bet 99.8 5.4E-21 1.8E-25 178.2 10.1 169 111-292 47-228 (357)
216 2hox_A ALLIIN lyase 1; cystein 99.8 3.9E-21 1.3E-25 183.8 9.1 258 66-366 56-339 (427)
217 4ffc_A 4-aminobutyrate aminotr 99.8 1.2E-18 4.2E-23 167.8 25.8 262 67-362 63-363 (453)
218 3oks_A 4-aminobutyrate transam 99.8 4.5E-19 1.5E-23 170.7 22.2 263 66-362 59-365 (451)
219 3hmu_A Aminotransferase, class 99.8 7.6E-19 2.6E-23 170.0 23.8 264 66-363 53-366 (472)
220 2e7u_A Glutamate-1-semialdehyd 99.8 1.5E-19 5.1E-24 172.6 17.9 245 77-363 67-340 (424)
221 3k28_A Glutamate-1-semialdehyd 99.8 1.3E-19 4.3E-24 173.5 17.4 252 67-363 52-340 (429)
222 3fq8_A Glutamate-1-semialdehyd 99.8 3.1E-19 1.1E-23 170.6 19.7 254 68-363 52-340 (427)
223 4e77_A Glutamate-1-semialdehyd 99.8 5E-19 1.7E-23 169.2 21.0 256 66-363 51-341 (429)
224 4a6r_A Omega transaminase; tra 99.8 5.7E-19 2E-23 170.4 20.8 260 67-360 49-360 (459)
225 2oqx_A Tryptophanase; lyase, p 99.8 5.7E-20 1.9E-24 177.6 11.8 258 67-366 40-346 (467)
226 3i5t_A Aminotransferase; pyrid 99.8 2.8E-18 9.7E-23 166.2 22.6 271 67-363 53-369 (476)
227 4h51_A Aspartate aminotransfer 99.8 6.3E-19 2.2E-23 167.3 16.1 269 68-363 46-351 (420)
228 3bc8_A O-phosphoseryl-tRNA(SEC 99.8 9.1E-19 3.1E-23 165.6 15.9 231 106-364 93-338 (450)
229 1ohv_A 4-aminobutyrate aminotr 99.8 5E-17 1.7E-21 157.2 22.8 264 66-363 61-394 (472)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 5.3E-18 1.8E-22 158.5 14.8 215 117-364 123-356 (501)
231 2yky_A Beta-transaminase; tran 99.6 7E-20 2.4E-24 175.8 0.0 246 77-363 115-375 (465)
232 4ao9_A Beta-phenylalanine amin 99.7 4.3E-16 1.5E-20 148.6 15.3 255 66-363 85-361 (454)
233 4atq_A 4-aminobutyrate transam 99.7 1.8E-14 6.1E-19 137.9 24.5 263 66-362 62-364 (456)
234 3ou5_A Serine hydroxymethyltra 99.7 4E-15 1.4E-19 138.6 18.8 279 69-363 57-354 (490)
235 4e3q_A Pyruvate transaminase; 99.6 9.9E-14 3.4E-18 133.3 18.7 266 66-363 65-383 (473)
236 4a0g_A Adenosylmethionine-8-am 99.3 1.4E-10 5E-15 118.6 19.2 249 69-340 381-721 (831)
237 1tks_A 3,4-dihydroxy-2-butanon 61.0 13 0.00044 30.6 5.2 35 208-242 159-193 (204)
238 2orv_A Thymidine kinase; TP4A 52.4 41 0.0014 28.3 7.1 92 139-247 34-125 (234)
239 3kts_A Glycerol uptake operon 49.0 17 0.00058 29.7 4.0 66 197-267 18-89 (192)
240 3sho_A Transcriptional regulat 48.6 59 0.002 25.7 7.4 35 204-242 84-118 (187)
241 3mio_A DHBP synthase, 3,4-dihy 43.9 44 0.0015 27.5 5.7 35 208-242 158-193 (206)
242 3ecs_A Translation initiation 42.5 1.8E+02 0.0061 25.6 11.2 102 130-243 122-228 (315)
243 3dm5_A SRP54, signal recogniti 41.2 1.8E+02 0.0061 27.0 10.2 127 110-248 73-225 (443)
244 3qr3_A Endoglucanase EG-II; TI 40.8 83 0.0028 28.0 7.7 65 169-248 43-107 (340)
245 1g57_A DHBP synthase, 3,4-dihy 40.1 55 0.0019 27.2 5.8 34 208-242 167-200 (217)
246 4gqr_A Pancreatic alpha-amylas 39.1 17 0.00058 34.0 3.0 31 217-247 69-99 (496)
247 3rjz_A N-type ATP pyrophosphat 38.6 1.4E+02 0.0049 25.0 8.4 101 131-243 7-121 (237)
248 4fgs_A Probable dehydrogenase 38.3 85 0.0029 27.0 7.1 83 131-224 30-119 (273)
249 1snn_A DHBP synthase, 3,4-dihy 38.2 49 0.0017 27.6 5.2 34 208-242 178-211 (227)
250 3m9w_A D-xylose-binding peripl 37.8 57 0.0019 28.1 6.1 76 165-245 15-91 (313)
251 1x92_A APC5045, phosphoheptose 37.7 95 0.0032 24.7 7.1 39 200-242 106-144 (199)
252 3jug_A Beta-mannanase; TIM-bar 37.0 58 0.002 29.1 6.0 17 177-193 62-78 (345)
253 4f6o_A Metacaspase-1; rossmann 36.6 85 0.0029 28.1 7.0 55 114-170 78-141 (350)
254 2yva_A DNAA initiator-associat 36.2 1E+02 0.0036 24.4 7.1 37 202-242 104-140 (196)
255 3ghf_A Septum site-determining 35.3 1.1E+02 0.0038 22.5 6.4 18 225-242 61-78 (120)
256 3ff4_A Uncharacterized protein 34.5 45 0.0015 24.8 4.1 38 199-243 73-110 (122)
257 1v77_A PH1877P, hypothetical p 33.7 25 0.00084 29.1 2.8 73 170-244 85-166 (212)
258 3bbl_A Regulatory protein of L 33.1 1.7E+02 0.0057 24.6 8.4 47 170-216 26-72 (287)
259 1g94_A Alpha-amylase; beta-alp 32.5 24 0.00081 32.9 2.8 31 217-247 57-87 (448)
260 3uug_A Multiple sugar-binding 32.4 61 0.0021 28.0 5.4 73 168-245 19-92 (330)
261 3kbq_A Protein TA0487; structu 32.3 72 0.0025 25.3 5.2 62 170-234 24-88 (172)
262 3bzy_B ESCU; auto cleavage pro 32.1 27 0.00093 24.1 2.3 20 227-246 29-48 (83)
263 3i6i_A Putative leucoanthocyan 32.0 1.7E+02 0.0059 25.4 8.5 55 180-243 59-116 (346)
264 3guv_A Site-specific recombina 31.8 1.3E+02 0.0045 23.2 6.8 71 173-243 30-110 (167)
265 1y5e_A Molybdenum cofactor bio 31.6 63 0.0022 25.4 4.8 51 168-221 30-85 (169)
266 3qtp_A Enolase 1; glycolysis, 30.8 1.5E+02 0.0052 27.4 7.8 97 138-244 281-379 (441)
267 4h1h_A LMO1638 protein; MCCF-l 30.5 1.5E+02 0.0052 26.1 7.7 74 153-226 8-96 (327)
268 3jy6_A Transcriptional regulat 30.3 50 0.0017 27.8 4.3 63 171-241 26-88 (276)
269 2j9r_A Thymidine kinase; TK1, 30.1 1.1E+02 0.0038 25.2 6.2 94 139-246 43-136 (214)
270 3e2i_A Thymidine kinase; Zn-bi 30.0 65 0.0022 26.8 4.7 94 139-246 43-136 (219)
271 3bh4_A Alpha-amylase; calcium, 29.7 30 0.001 32.5 3.0 31 217-247 71-101 (483)
272 1mxg_A Alpha amylase; hyperthe 29.2 32 0.0011 31.9 3.1 30 218-247 80-109 (435)
273 1wpc_A Glucan 1,4-alpha-maltoh 28.9 32 0.0011 32.4 3.0 30 218-247 76-105 (485)
274 3bgw_A DNAB-like replicative h 28.9 2.3E+02 0.0077 26.2 8.9 48 196-243 291-355 (444)
275 3gi1_A LBP, laminin-binding pr 28.8 1.9E+02 0.0065 24.8 7.9 73 156-242 178-255 (286)
276 3tla_A MCCF; serine protease, 28.4 2E+02 0.0067 26.0 8.1 74 153-226 39-127 (371)
277 1ud2_A Amylase, alpha-amylase; 28.3 33 0.0011 32.2 3.0 30 219-248 75-104 (480)
278 1hvx_A Alpha-amylase; hydrolas 28.3 33 0.0011 32.6 3.0 30 218-247 75-104 (515)
279 3l6u_A ABC-type sugar transpor 28.1 59 0.002 27.5 4.5 72 170-246 26-98 (293)
280 2al1_A Enolase 1, 2-phospho-D- 27.6 1.8E+02 0.006 26.9 7.8 96 138-243 275-371 (436)
281 3o63_A Probable thiamine-phosp 27.5 54 0.0019 27.7 4.0 48 198-245 46-103 (243)
282 4h1z_A Enolase Q92ZS5; dehydra 27.4 2.6E+02 0.0088 25.5 8.9 85 155-245 256-340 (412)
283 3tb6_A Arabinose metabolism tr 27.2 99 0.0034 26.0 5.8 75 169-245 32-107 (298)
284 4gs5_A Acyl-COA synthetase (AM 27.1 2.3E+02 0.008 24.9 8.5 68 118-189 29-110 (358)
285 1ry2_A Acetyl-coenzyme A synth 27.1 3.2E+02 0.011 26.5 10.1 74 153-231 135-209 (663)
286 3dhu_A Alpha-amylase; structur 27.0 34 0.0012 31.7 2.8 28 220-247 79-106 (449)
287 1lwj_A 4-alpha-glucanotransfer 26.9 34 0.0012 31.7 2.8 29 219-247 64-92 (441)
288 1k4i_A 3,4-dihydroxy-2-butanon 26.7 97 0.0033 25.9 5.2 22 221-242 190-211 (233)
289 3mfq_A TROA, high-affinity zin 26.6 74 0.0025 27.5 4.8 64 175-242 174-242 (282)
290 1q57_A DNA primase/helicase; d 26.4 3.3E+02 0.011 25.4 9.7 48 196-243 337-399 (503)
291 2akz_A Gamma enolase, neural; 26.3 2.1E+02 0.0072 26.4 8.0 95 139-243 273-368 (439)
292 1ht6_A AMY1, alpha-amylase iso 26.2 37 0.0013 31.1 2.9 29 220-248 64-92 (405)
293 3nl6_A Thiamine biosynthetic b 25.9 55 0.0019 31.3 4.1 47 199-245 29-76 (540)
294 2o1e_A YCDH; alpha-beta protei 25.8 2E+02 0.007 25.0 7.6 73 156-242 189-266 (312)
295 1gcy_A Glucan 1,4-alpha-maltot 25.7 41 0.0014 32.1 3.2 30 219-248 87-116 (527)
296 1qyd_A Pinoresinol-lariciresin 25.7 3E+02 0.01 23.2 8.8 54 181-240 55-110 (313)
297 3t7y_A YOP proteins translocat 25.6 36 0.0012 24.3 2.1 20 227-246 44-63 (97)
298 2vt1_B Surface presentation of 25.5 41 0.0014 23.8 2.3 20 227-246 29-48 (93)
299 2dh2_A 4F2 cell-surface antige 25.4 40 0.0014 31.1 3.0 31 217-247 74-104 (424)
300 2g0t_A Conserved hypothetical 25.2 2.9E+02 0.0099 24.6 8.5 106 131-243 92-203 (350)
301 3krb_A Aldose reductase; ssgci 25.1 3.5E+02 0.012 23.7 12.8 72 171-250 158-230 (334)
302 4e5s_A MCCFLIKE protein (BA_56 25.0 2.5E+02 0.0087 24.7 8.1 74 153-226 8-96 (331)
303 2guy_A Alpha-amylase A; (beta- 25.0 37 0.0013 31.8 2.7 31 218-248 91-121 (478)
304 2fym_A Enolase; RNA degradosom 24.8 1.9E+02 0.0063 26.6 7.4 84 158-244 284-368 (431)
305 3pzt_A Endoglucanase; alpha/be 24.8 1E+02 0.0035 27.1 5.5 18 174-191 74-91 (327)
306 1jae_A Alpha-amylase; glycosid 24.4 33 0.0011 32.2 2.2 31 217-247 67-97 (471)
307 3dbi_A Sugar-binding transcrip 24.3 1E+02 0.0034 26.8 5.4 71 169-245 80-151 (338)
308 4aie_A Glucan 1,6-alpha-glucos 24.1 42 0.0014 31.9 2.9 28 220-247 75-102 (549)
309 3c01_E Surface presentation of 24.0 40 0.0014 24.1 2.1 20 227-246 29-48 (98)
310 3h5o_A Transcriptional regulat 23.8 1.3E+02 0.0045 26.1 6.1 50 167-216 77-126 (339)
311 1wzu_A Quinolinate synthetase 23.8 3.6E+02 0.012 23.4 8.5 94 131-238 121-224 (300)
312 3qn3_A Enolase; structural gen 23.5 3.8E+02 0.013 24.5 9.2 99 138-244 263-362 (417)
313 1wza_A Alpha-amylase A; hydrol 23.3 43 0.0015 31.5 2.8 27 221-247 78-104 (488)
314 3k9c_A Transcriptional regulat 23.2 1.2E+02 0.0041 25.6 5.6 47 170-217 29-75 (289)
315 2e8y_A AMYX protein, pullulana 23.2 31 0.001 34.4 1.8 27 222-248 313-339 (718)
316 3sr3_A Microcin immunity prote 23.1 2.5E+02 0.0084 24.9 7.6 74 153-226 9-97 (336)
317 2ioj_A Hypothetical protein AF 23.1 2.3E+02 0.008 21.0 9.3 49 184-243 54-103 (139)
318 2xhz_A KDSD, YRBH, arabinose 5 23.0 2E+02 0.0067 22.3 6.5 32 206-241 95-126 (183)
319 3ayr_A Endoglucanase; TIM barr 23.0 1.3E+02 0.0045 26.9 6.0 21 227-247 105-125 (376)
320 2z1k_A (NEO)pullulanase; hydro 22.9 42 0.0014 31.3 2.7 30 218-247 90-119 (475)
321 1zco_A 2-dehydro-3-deoxyphosph 22.9 1.4E+02 0.0047 25.5 5.7 124 110-252 73-206 (262)
322 3enk_A UDP-glucose 4-epimerase 22.8 2.8E+02 0.0095 23.8 8.1 83 154-239 26-121 (341)
323 4exb_A Putative uncharacterize 22.8 2.4E+02 0.0083 24.2 7.4 83 155-247 149-238 (292)
324 3keo_A Redox-sensing transcrip 22.7 88 0.003 25.8 4.2 112 113-248 68-182 (212)
325 3ik4_A Mandelate racemase/muco 22.7 1.9E+02 0.0066 25.8 7.0 85 155-246 213-298 (365)
326 1iv0_A Hypothetical protein; r 22.6 1.6E+02 0.0054 20.8 5.1 53 196-248 38-96 (98)
327 2pa6_A Enolase; glycolysis, ly 22.5 2.5E+02 0.0085 25.7 7.8 96 138-243 269-365 (427)
328 3h75_A Periplasmic sugar-bindi 22.4 80 0.0027 27.7 4.3 72 169-246 21-95 (350)
329 3tsm_A IGPS, indole-3-glycerol 22.0 3.4E+02 0.012 23.1 8.0 73 167-246 105-177 (272)
330 2ya0_A Putative alkaline amylo 22.0 39 0.0013 33.6 2.3 26 223-248 253-278 (714)
331 3nbm_A PTS system, lactose-spe 21.7 1.1E+02 0.0038 22.1 4.1 58 207-269 5-62 (108)
332 2d59_A Hypothetical protein PH 21.6 1.1E+02 0.0039 23.1 4.5 42 200-248 93-134 (144)
333 2aaa_A Alpha-amylase; glycosid 21.5 45 0.0015 31.3 2.5 32 217-248 90-121 (484)
334 3s5s_A Mandelate racemase/muco 21.5 1.9E+02 0.0065 26.2 6.7 86 155-246 214-299 (389)
335 3g1w_A Sugar ABC transporter; 21.5 97 0.0033 26.3 4.6 73 169-246 21-95 (305)
336 2rgy_A Transcriptional regulat 21.5 1.7E+02 0.0059 24.5 6.2 17 173-189 29-45 (290)
337 1tjy_A Sugar transport protein 21.4 1.2E+02 0.004 26.2 5.1 71 170-245 21-93 (316)
338 3rot_A ABC sugar transporter, 21.3 1.1E+02 0.0037 26.0 4.9 73 169-246 20-95 (297)
339 3bc9_A AMYB, alpha amylase, ca 21.3 52 0.0018 32.0 3.0 29 219-247 203-231 (599)
340 2wc7_A Alpha amylase, catalyti 21.2 41 0.0014 31.6 2.2 28 220-247 98-125 (488)
341 2pjk_A 178AA long hypothetical 21.1 1.3E+02 0.0046 23.8 5.0 60 170-232 41-105 (178)
342 3kl4_A SRP54, signal recogniti 21.1 3.8E+02 0.013 24.6 8.7 131 110-248 69-224 (433)
343 3l77_A Short-chain alcohol deh 21.1 3.3E+02 0.011 21.9 9.5 66 154-222 23-94 (235)
344 2r6j_A Eugenol synthase 1; phe 20.9 3.8E+02 0.013 22.7 8.7 54 181-243 58-112 (318)
345 3tqp_A Enolase; energy metabol 20.9 2.7E+02 0.0092 25.6 7.6 99 138-244 265-364 (428)
346 1m53_A Isomaltulose synthase; 20.9 49 0.0017 31.9 2.7 28 220-247 88-115 (570)
347 3tqq_A Methionyl-tRNA formyltr 20.8 1.8E+02 0.0063 25.4 6.2 94 198-291 15-117 (314)
348 1vhx_A Putative holliday junct 20.5 1.6E+02 0.0054 22.7 5.1 55 194-248 40-101 (150)
349 3uj2_A Enolase 1; enzyme funct 20.5 5.1E+02 0.017 23.9 10.3 99 138-244 291-390 (449)
350 1zja_A Trehalulose synthase; s 20.4 53 0.0018 31.5 2.8 29 219-247 74-102 (557)
351 3o74_A Fructose transport syst 20.4 74 0.0025 26.4 3.5 70 170-245 20-90 (272)
352 3bh0_A DNAB-like replicative h 20.4 3.4E+02 0.012 23.4 8.0 48 196-243 162-226 (315)
353 3l49_A ABC sugar (ribose) tran 20.3 68 0.0023 27.0 3.3 72 170-246 23-95 (291)
354 3guy_A Short-chain dehydrogena 20.2 2.5E+02 0.0084 22.7 6.7 60 154-220 22-84 (230)
355 1ua7_A Alpha-amylase; beta-alp 20.2 42 0.0014 30.9 1.9 29 220-248 70-98 (422)
356 8abp_A L-arabinose-binding pro 20.2 1E+02 0.0034 26.2 4.4 70 169-244 19-89 (306)
357 4a1f_A DNAB helicase, replicat 20.1 1.3E+02 0.0045 26.7 5.2 49 195-243 137-201 (338)
358 1j0h_A Neopullulanase; beta-al 20.1 52 0.0018 31.8 2.7 29 220-248 218-246 (588)
359 1vp5_A 2,5-diketo-D-gluconic a 20.0 4.2E+02 0.014 22.8 12.6 158 71-246 29-202 (298)
No 1
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=3.5e-40 Score=313.26 Aligned_cols=317 Identities=46% Similarity=0.779 Sum_probs=266.5
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD 128 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~ 128 (368)
+.+|++||......+ +++++|||+++.++.|+.+.+++.+.+.....+++.+.+..++...+...++|+.+++++|.++
T Consensus 6 ~~~r~~f~~~~~~~~-g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~ 84 (406)
T 1kmj_A 6 DKVRADFPVLSREVN-GLPLAYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARS 84 (406)
T ss_dssp HHHHHTCGGGGCEET-TEECEECCTTTCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHhCcccccccC-CCceEEecCCccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 568999998743211 2468999999999999999999999998876677655555556667888899999999999832
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK 208 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~ 208 (368)
+++|++|+|+|+|+..++.++.+..+++||+|++.+++|++....+...++..|++++.++.++++.+|+++|+++++++
T Consensus 85 ~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~ 164 (406)
T 1kmj_A 85 AEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPTLFDEK 164 (406)
T ss_dssp GGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCTTSCBCGGGHHHHCCTT
T ss_pred CCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHhccC
Confidence 34999999999999999998721015789999999999999988888888888999999999888889999999999999
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
+++|++++++||||.++|+++|.++|++||+++|+|++|+.+..++++...++|++++|+||.+|++|+|++++++++++
T Consensus 165 ~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~ 244 (406)
T 1kmj_A 165 TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQ 244 (406)
T ss_dssp EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHH
T ss_pred CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHh
Confidence 99999999999999999999999999999999999999998877666555679999999999989999999999999999
Q ss_pred cCCCcccCCcceeecccC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 289 AMPPFLGGGEMISDVFLD-HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+++...||+........ ...+.....+++.|++++.+.+++..+++++.+.+++.+.++..++.+++.+.|.+++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 323 (406)
T 1kmj_A 245 EMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDL 323 (406)
T ss_dssp HCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred hcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 998887777654332111 112233446778889999999999899999987789999999999999999999887664
No 2
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.6e-39 Score=310.29 Aligned_cols=324 Identities=61% Similarity=0.948 Sum_probs=267.2
Q ss_pred CCccchhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHH
Q 017640 42 TDSVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVA 121 (368)
Q Consensus 42 ~~~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la 121 (368)
.....++..+|++|+....... +++++||+++.+++.|+.+.+++.+.+..+..+++.+.+.++....+...++++.++
T Consensus 4 ~~~~~~~~~~r~~f~~~~~~~~-g~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la 82 (420)
T 1t3i_A 4 LQIPSLAATVRQDFPILNQEIN-GHPLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVA 82 (420)
T ss_dssp ---CCHHHHHGGGCGGGSCEET-TEECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHhCCccccccC-CCceEEecCCccCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHH
Confidence 3456789999999998843211 245899999999999999999999999887666654444444444677889999999
Q ss_pred HHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHH
Q 017640 122 AFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKL 201 (368)
Q Consensus 122 ~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l 201 (368)
+++|.+++++|++|+|+|+|+.+++.++....+++||+|++++++|++....+...++..|++++.++.++++.+|+++|
T Consensus 83 ~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l 162 (420)
T 1t3i_A 83 KFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLDEQESFDLEHF 162 (420)
T ss_dssp HHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBCTTSSBCHHHH
T ss_pred HHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccCCCCCcCHHHH
Confidence 99999323499999999999999999872101678999999999999987777777778899999999988888999999
Q ss_pred HHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEE
Q 017640 202 KEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLF 281 (368)
Q Consensus 202 ~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~ 281 (368)
++++++++++|++++++||||.++|+++|.++|++||+++|+|++|+.+..+++....++|++++|+||.+|+.|+|+++
T Consensus 163 ~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~G~~~ 242 (420)
T 1t3i_A 163 KTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAPTGIGFLY 242 (420)
T ss_dssp HHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEE
T ss_pred HHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCCCceEEEE
Confidence 99999999999999999999999999999999999999999999999887765665567999999999999998999999
Q ss_pred EcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 017640 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 282 ~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+++++++.+++...+|+...........+.....++..|++++.+.+++..+++++.+.+++.+.++..++.+++.+.|.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~ 322 (420)
T 1t3i_A 243 GKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLG 322 (420)
T ss_dssp ECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred EchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888777666543332222233344567778899999999998899999888899999999999999999999
Q ss_pred hhcCC
Q 017640 362 ERHNT 366 (368)
Q Consensus 362 ~~~g~ 366 (368)
+++|+
T Consensus 323 ~~~g~ 327 (420)
T 1t3i_A 323 QIPQL 327 (420)
T ss_dssp TCTTE
T ss_pred hCCCe
Confidence 87664
No 3
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=1.1e-36 Score=287.86 Aligned_cols=305 Identities=23% Similarity=0.319 Sum_probs=250.2
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhh-ccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYN-SNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~ 127 (368)
+.+|++|+.. ++.+|||.+..++.|+.+.+++.+.+.... .+++ .+.......+...++++.+++++|.+
T Consensus 5 ~~~r~~f~~~-------~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~y~~~~~~~~~l~~~la~~~g~~ 75 (390)
T 1elu_A 5 TPSLHQFPGL-------ANKTYFNFGGQGILPTVALEAITAMYGYLQENGPF--SIAANQHIQQLIAQLRQALAETFNVD 75 (390)
T ss_dssp -----CCGGG-------TTSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSS--SHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHhcCCC-------CCeEEecCCccCCCCHHHHHHHHHHHHHHhccCCc--chhhHHHHHHHHHHHHHHHHHHcCCC
Confidence 4678999977 578999999999999999999999887642 1221 11111122467889999999999987
Q ss_pred CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhc
Q 017640 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEML 205 (368)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l 205 (368)
++ +|++|+|+++++..++.++ .+++||+|++.+++|++....+..+++..|++++.++.+ .++.+|+++|++++
T Consensus 76 ~~-~v~~~~g~t~a~~~~~~~~---~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 151 (390)
T 1elu_A 76 PN-TITITDNVTTGCDIVLWGL---DWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHL 151 (390)
T ss_dssp GG-GEEEESSHHHHHHHHHHHS---CCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTC
T ss_pred HH-HEEEeCChHHHHHHHHhCC---CCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhc
Confidence 64 8999999999999999987 368999999999999998877777777789999999987 57888999999999
Q ss_pred ccCceEEEEcccccccccccCHHHHHHHHH----hcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEE
Q 017640 206 SRKTKLVVIHHISNMLASILPIEEIVHWSH----DVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFL 280 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~----~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l 280 (368)
++++++|++++++||||.++|+++|.++|+ +||+++|+|++|+.|..++++...++|++++|+|| .+|+.|+|++
T Consensus 152 ~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~ 231 (390)
T 1elu_A 152 GPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGL 231 (390)
T ss_dssp CTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEE
T ss_pred CCCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEE
Confidence 989999999999999999999999999999 99999999999999888777767789999999999 7888889999
Q ss_pred EEcccccccCCCcccCCcceeeccc-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHH
Q 017640 281 FGKSDLLSAMPPFLGGGEMISDVFL-DHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSII 358 (368)
Q Consensus 281 ~~~~~li~~l~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~ 358 (368)
++++++++.+.+...||......+. ....+.+...++..||++...++++..+++.+.+.+ ++.+.++.+++.+++.+
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~ 311 (390)
T 1elu_A 232 YIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWR 311 (390)
T ss_dssp EECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred EECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9999999999887777665432221 011112223466778999999999999999988877 89999999999999999
Q ss_pred HHHhhcCC
Q 017640 359 VIQERHNT 366 (368)
Q Consensus 359 ~l~~~~g~ 366 (368)
.|.+++|+
T Consensus 312 ~L~~~~g~ 319 (390)
T 1elu_A 312 GLNQLPHV 319 (390)
T ss_dssp HHHHSTTE
T ss_pred HHHhcCCc
Confidence 99987664
No 4
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-37 Score=293.57 Aligned_cols=297 Identities=23% Similarity=0.368 Sum_probs=250.5
Q ss_pred hhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC
Q 017640 48 GHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS 127 (368)
Q Consensus 48 ~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~ 127 (368)
...+|++||.+. ++.+|||+++.+++++.+.+++.+.+.....++. +.+..+....+..+++++.+++++|.+
T Consensus 13 ~~~~r~~fp~~~------~~~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~ 85 (406)
T 3cai_A 13 VARVRGLHPSLG------DGWVHFDAPAGMLIPDSVATTVSTAFRRSGASTV-GAHPSARRSAAVLDAAREAVADLVNAD 85 (406)
T ss_dssp HHHHHHTCTTTT------SSCEECBGGGCCCCCHHHHHHHHHHHHHCCSSSC-SSSHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhhhhcC------CCeEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCC-CccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457899999982 4589999999999999999999999887655553 344455556788889999999999996
Q ss_pred CCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhcc
Q 017640 128 DSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DDESPDLDKLKEMLS 206 (368)
Q Consensus 128 ~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~ 206 (368)
++ +|++|+|+|+++..++.++.. .+++||+|++++++|+++...+..+++..|++++.++++ +++.+|+++|+++++
T Consensus 86 ~~-~v~~~~g~t~al~~~~~~l~~-~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~l~ 163 (406)
T 3cai_A 86 PG-GVVLGADRAVLLSLLAEASSS-RAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIETGELPTWQWESLIS 163 (406)
T ss_dssp GG-GEEEESCHHHHHHHHHHHTGG-GGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTTTCCCCGGGHHHHCC
T ss_pred CC-eEEEeCChHHHHHHHHHHHhh-ccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcccCCcCHHHHHHHhC
Confidence 54 999999999999999987621 157899999999999998888887777679999999998 678899999999999
Q ss_pred cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcce-EEEEccc
Q 017640 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIG-FLFGKSD 285 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G-~l~~~~~ 285 (368)
+++++|++++++||||.++|+++|.++|+++|+++|+|++|+.|..++++...++|++++|+||++||. +| +++++++
T Consensus 164 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~ 242 (406)
T 3cai_A 164 KSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPS 242 (406)
T ss_dssp TTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHH
T ss_pred CCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehH
Confidence 999999999999999999999999999999999999999999887766665668999999999998875 78 9999999
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC--------------HHHHHHHHHH
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG--------------MQKIHAYEVK 351 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g--------------~~~i~~~~~~ 351 (368)
+++.+++....++. ....++..||++..+++++..+++++...| ++.+.++..+
T Consensus 243 ~~~~l~~~~~~~~~------------~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 310 (406)
T 3cai_A 243 VMNSFGSVSTNPYA------------TGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNR 310 (406)
T ss_dssp HHHTSCCCCSCTTC------------CGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCcccCCCC------------CccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHH
Confidence 88887765321110 012456788999999999999999888755 6889999999
Q ss_pred HHHHHHHHHHhhcCC
Q 017640 352 WIICSIIVIQERHNT 366 (368)
Q Consensus 352 l~~~l~~~l~~~~g~ 366 (368)
+++++.+.|.+++|+
T Consensus 311 ~~~~l~~~L~~~~~~ 325 (406)
T 3cai_A 311 VFDYLMVSLRSLPLV 325 (406)
T ss_dssp HHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHhcCCCe
Confidence 999999999887664
No 5
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.2e-36 Score=290.85 Aligned_cols=285 Identities=25% Similarity=0.318 Sum_probs=247.8
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHH--HhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAATSQKPIAVLKALQNYYE--AYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+++.+|||+++.+++++.+.+++.+.+. ..+.+++.+.+..++...+..+++++.+++++|.+++ +|++|+|+++|+
T Consensus 20 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~ggt~a~ 98 (423)
T 3lvm_A 20 MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFTSGATESD 98 (423)
T ss_dssp CCSSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEESSHHHHH
T ss_pred cCCCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-eEEEeCChHHHH
Confidence 4788999999999999999999998887 5556665435566677788899999999999999764 999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
.+++.++.....++||+|++++++|++....+..+ +..|++++.++.++++.+|+++|++++++++++|++++++||||
T Consensus 99 ~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG 177 (423)
T 3lvm_A 99 NLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIG 177 (423)
T ss_dssp HHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-HHTTCEEEEECCCTTSCCCHHHHHHHCCTTEEEEECCSBCTTTC
T ss_pred HHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-HHcCCEEEEeccCCCCccCHHHHHHhcCCCcEEEEEeCCCCCCc
Confidence 99999872111247999999999999987766554 66799999999999999999999999999999999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceee
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~ 302 (368)
.++|+++|.++|++||+++|+|++|+.+..+++....++|++++|+||++|+.|+|+++++++.++.+.+...+++.
T Consensus 178 ~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~~~~~--- 254 (423)
T 3lvm_A 178 VVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMHGGGH--- 254 (423)
T ss_dssp BBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSCSSCT---
T ss_pred cccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCccccCCcc---
Confidence 99999999999999999999999999988877777788999999999999999999999999998888877765543
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..++++...++++..+++.+... ++.+.++..++.+++.+.|.+++|+
T Consensus 255 -----------~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~ 306 (423)
T 3lvm_A 255 -----------ERGMRSGTLPVHQIVGMGEAYRIAKEE-MATEMERLRGLRNRLWNGIKDIEEV 306 (423)
T ss_dssp -----------TTTTCCSCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred -----------cccccCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 134667899999999999999988775 8899999999999999999887664
No 6
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=100.00 E-value=6.4e-37 Score=296.76 Aligned_cols=312 Identities=15% Similarity=0.134 Sum_probs=252.1
Q ss_pred hhhcCCCCcccccc---------cCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhh-HHHHHHHHHHHH
Q 017640 49 HITRPDFPILHQEV---------YGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLS-AKATDEYELARK 118 (368)
Q Consensus 49 ~~~r~~f~~~~~~~---------~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~ 118 (368)
..+|++|+...... +.+++.+|||+++.++.|+.+.+++.+.+..+...... .+..+ ..+.+..+++++
T Consensus 40 ~~~r~~f~~~~~~~~~~~~~~~~~~~~~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 118 (465)
T 3e9k_A 40 RHFRECFYIPKIQDLPPVDLSLVNKDENAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAY-GHEVGKRPWITGDESIVG 118 (465)
T ss_dssp GGGGGGEECCBGGGSTTCCGGGSCTTCBCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGG-GGTSSSSCGGGTTHHHHG
T ss_pred HHHHHhcCCCCcccccccccccccCCCCeEEecCCccCCChHHHHHHHHHHHHHHHhhCCc-ccccCCccHHHhHHHHHH
Confidence 45788888654211 10247899999999999999988888877654322111 11111 123345567899
Q ss_pred HHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEE-----EEEeCCCC
Q 017640 119 KVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANL-----KFLNLNDD 193 (368)
Q Consensus 119 ~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v-----~~v~~~~~ 193 (368)
++++++|++++ +|++|+|+|+++.+++.++.. +.++|++|++.+++|++....+...++..|+++ ..++.+.+
T Consensus 119 ~la~~~g~~~~-~v~~t~g~t~al~~~~~~~~~-~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~ 196 (465)
T 3e9k_A 119 LMKDIVGANEK-EIALMNALTVNLHLLMLSFFK-PTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGE 196 (465)
T ss_dssp GGHHHHTCCGG-GEEECSCHHHHHHHHHHHHCC-CCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTC
T ss_pred HHHHHcCCCcC-CEEEECCHHHHHHHHHHHhcc-ccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCC
Confidence 99999999864 999999999999999999821 123455699999999999888888888889874 34466667
Q ss_pred CCCCHHHHHHhcc---cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC
Q 017640 194 ESPDLDKLKEMLS---RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK 270 (368)
Q Consensus 194 ~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K 270 (368)
+.+|+++|+++++ +++++|++++++||||.+.|+++|.++|++||+++++|++|+.|..++++..+++|++++|+||
T Consensus 197 ~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K 276 (465)
T 3e9k_A 197 ETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYK 276 (465)
T ss_dssp SSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSS
T ss_pred CccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECccc
Confidence 8899999999996 6789999999999999999999999999999999999999999999888888899999999999
Q ss_pred cC--CCCcceEEEEcccccccCCCcccCCccee--ecc--cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 017640 271 MC--GPTGIGFLFGKSDLLSAMPPFLGGGEMIS--DVF--LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (368)
Q Consensus 271 ~~--g~~G~G~l~~~~~li~~l~~~~~g~~~~~--~~~--~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~ 344 (368)
++ ||.|+|++++++++++.+.+...||.... ..+ .....+.....+|+.||+++.+++++.++++.+.+.|++.
T Consensus 277 ~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~ 356 (465)
T 3e9k_A 277 YLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKA 356 (465)
T ss_dssp TTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred ccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHH
Confidence 77 56669999999999999988887765432 111 1224455667899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 017640 345 IHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~ 363 (368)
++++..++.+++.+.|.++
T Consensus 357 ~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 357 LRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999886
No 7
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=3.6e-36 Score=282.98 Aligned_cols=278 Identities=26% Similarity=0.412 Sum_probs=239.4
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
+||||+++.+++++.+.+++.+.+.....+++. .+..+....+..+++++++++++|.+++ +|++|+|+++++.+++.
T Consensus 1 ~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~~g~~~a~~~~~~ 78 (382)
T 4hvk_A 1 MAYFDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFTSGATEANNLAII 78 (382)
T ss_dssp -CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHTTCTTE-EEEEESSHHHHHHHHHH
T ss_pred CEeecCCCcCCCCHHHHHHHHHHHHhhcCCCcc-cchHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEECCchHHHHHHHH
Confidence 379999999999999999999999887677764 4556667788899999999999999764 89999999999999999
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCH
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (368)
++.....++||+|++++++|++....+..+ +..|++++.++.++++.+|+++|++++++++++|++++++||||.+.|+
T Consensus 79 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~ 157 (382)
T 4hvk_A 79 GYAMRNARKGKHILVSAVEHMSVINPAKFL-QKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPV 157 (382)
T ss_dssp HHHHHHGGGCCEEEEETTCCHHHHHHHHHH-HHTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCH
T ss_pred HhhhhhcCCCCEEEECCCCcHHHHHHHHHH-HhcCCEEEEeccCCCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCH
Confidence 881000189999999999999987766554 5679999999999889999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
++|.++|++||+ +|+|++|+.+..+++....+.|++++|+||++|+.|+|+++++++. .+.+...++..
T Consensus 158 ~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~~~~~~~~~-------- 226 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQ-------- 226 (382)
T ss_dssp HHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCCCSSCSSCT--------
T ss_pred HHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcCcccccCCC--------
Confidence 999999999999 9999999988877776666899999999999999999999998876 55666555433
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..++++...+.++..++++..+ +++.+.++..++++++.+.|.+++|+
T Consensus 227 ------~~~~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~ 278 (382)
T 4hvk_A 227 ------ENGLRSGSENVPSIVGFGKAAEITAM-EWREEAERLRRLRDRIIDNVLKIEES 278 (382)
T ss_dssp ------GGGTSCSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred ------cCccccCCcCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 24567889999999999999987664 68899999999999999999987664
No 8
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=6.6e-36 Score=281.64 Aligned_cols=273 Identities=26% Similarity=0.399 Sum_probs=231.2
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
+|||+++.+++++.+++++.+.+.....+++. .+..+....+...++++++++++|.+++ +|++|+|+++|+.+++.+
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~ 79 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS-VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFTSGATEANNLAIIG 79 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTCTTE-EEEEESSHHHHHHHHHHH
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCC-CcHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEcCchHHHHHHHHHH
Confidence 79999999999999999999998875555543 3444555678889999999999999754 899999999999999998
Q ss_pred ccCCCC----CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 149 WGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 149 ~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
+ . ++||+|++++++|++....+.. ++..|++++.+++++++.+|+++|++++++++++|++++++||||.+
T Consensus 80 l----~~~~~~~gd~Vl~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 154 (382)
T 4eb5_A 80 Y----AMRNARKGKHILVSAVEHMSVINPAKF-LQKQGFEVEYIPVGKYGEVDVSFIDQKLRDDTILVSVQHANNEIGTI 154 (382)
T ss_dssp H----HHHHGGGCCEEEEETTCCHHHHHHHHH-HTTTTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBB
T ss_pred H----HhhccCCCCEEEECCCcchHHHHHHHH-HHhCCcEEEEeccCCCCccCHHHHHHHhcCCCeEEEEeccCCCcccc
Confidence 8 5 7899999999999987665543 34469999999998888899999999999899999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVF 304 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~ 304 (368)
+|+++|.++|++||++ |+|++|+.+..++++...+.|++++|+||++|+.|+|+++++++. .+++...+++.
T Consensus 155 ~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~~~~~~~~~----- 226 (382)
T 4eb5_A 155 QPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQPVILGGGQ----- 226 (382)
T ss_dssp CCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCCCSSCSSCT-----
T ss_pred CCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccCceecCCCc-----
Confidence 9999999999999999 999999988766665555789999999999999899999998874 34444443321
Q ss_pred cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 305 LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..++++...+.++..+++.+.+ +++.+.++..++++++.+.|.+++|+
T Consensus 227 ---------~~~~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~ 278 (382)
T 4eb5_A 227 ---------ENGLRSGSENVPSIVGFGKAAEITAM-EWREEAERLRRLRDRIIDNVLKIEES 278 (382)
T ss_dssp ---------GGGTSCSCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred ---------cccccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 13456779999999999999998776 58899999999999999999887654
No 9
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=2.6e-35 Score=279.50 Aligned_cols=278 Identities=22% Similarity=0.321 Sum_probs=237.3
Q ss_pred CCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 65 SKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 65 ~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.++.+|||+++.+++++.+.+++.+.+.....+++. .+..+....+..+++++++++++|++++ +|++|+|+++|+.+
T Consensus 18 ~~~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~g~t~al~~ 95 (400)
T 3vax_A 18 GSHMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGS-RHEYGIRAKRGVERAREYLASTVSAEPD-ELIFTSGATESNNI 95 (400)
T ss_dssp ----CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSC-HHHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEESCHHHHHHH
T ss_pred cCCcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcc-cchhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEeCCHHHHHHH
Confidence 367899999999999999999999999887677653 4555566678889999999999999754 99999999999999
Q ss_pred HHHHccCCCC----CCCC-EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc
Q 017640 145 VAYSWGLSNL----KSGD-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 145 ~~~~~~~~~~----~~gd-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
++.++ . ++|| +|++++++|+++...+..+ +..|++++.++.++++.+|+++|++++++++++|++++++|
T Consensus 96 ~~~~l----~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n 170 (400)
T 3vax_A 96 ALLGL----APYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGFEVDFLTPGPSGRISVEGVMERLRPDTLLVSLMHVNN 170 (400)
T ss_dssp HHHTT----HHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTCEEEEECCCTTCCCCHHHHHTTCCTTEEEEECCSBCT
T ss_pred HHHHH----HHhhccCCCCEEEECccccHhHHHHHHHH-HhcCCeEEEEccCCCCCcCHHHHHHhcCCCceEEEEECCCC
Confidence 99987 5 7899 9999999999988777665 56799999999998999999999999999999999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEE-Eccccc----ccCCCcc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLF-GKSDLL----SAMPPFL 294 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~-~~~~li----~~l~~~~ 294 (368)
|||.+.|+++|.++|++||+++|+|++|+.+..++++... +|++++|+||++|+.|+|+++ ++++.+ ..+.+..
T Consensus 171 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~ 249 (400)
T 3vax_A 171 ETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIM 249 (400)
T ss_dssp TTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSS
T ss_pred CceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHHhCCCCceEEEEEecchhccccccccCcee
Confidence 9999999999999999999999999999998887777766 999999999999998999999 888322 2444554
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++.. ..++..++++...++++..+++.+.+ +++.+.++..++++++.+.|. .+|+
T Consensus 250 ~~~~~--------------~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~-~~~~ 305 (400)
T 3vax_A 250 FGGGQ--------------ERKLRPGTLPVPLIMGLAEAAKIFEA-EHAQWQVAAQDLRSRLLAGLA-STSF 305 (400)
T ss_dssp CSSCT--------------GGGTSCSCCCHHHHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHHHHT-TTTC
T ss_pred cCCCc--------------eeeeecCCCCHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHhhC-CCCE
Confidence 43332 24566889999999999999998776 789999999999999999998 6664
No 10
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=1.4e-34 Score=272.63 Aligned_cols=277 Identities=25% Similarity=0.364 Sum_probs=231.5
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
+|||+++.+++++.+.+++.+.+...+.+++. .+..++...+...++++.+++++|.+++ +|++|+|+++|+..++.+
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~~g~t~a~~~~~~~ 80 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFTSCATESINWILKT 80 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC-SSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEESCHHHHHHHHHHH
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCcc-ccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEECCHHHHHHHHHHh
Confidence 79999999999999999999998865555543 3455666778889999999999998764 999999999999999999
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
+.....++||+|++++++|++....+.. ++..|++++.++.++++.+|+++|++++++++++|++++++||||.++|++
T Consensus 81 ~~~~~~~~gd~vl~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~ 159 (384)
T 1eg5_A 81 VAETFEKRKRTIITTPIEHKAVLETMKY-LSMKGFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVE 159 (384)
T ss_dssp HHHHTTTTCCEEEECTTSCHHHHHHHHH-HHHTTCEEEECCBCTTSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHH
T ss_pred hhhhccCCCCEEEECCCCchHHHHHHHH-HHhcCCEEEEEccCCCCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHH
Confidence 8210127899999999999987665543 356799999999988898999999999998999999999999999999999
Q ss_pred HHHHHHHhcC--CEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccC
Q 017640 229 EIVHWSHDVG--AKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 229 ~i~~l~~~~g--~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
+|.++|++|| +++|+|++|+++..++++...+.|++++|+||++|++|+|++++++++ .+.+.+.++..
T Consensus 160 ~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~~~~~~~~~~------- 230 (384)
T 1eg5_A 160 DVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIRPLIHGGGQ------- 230 (384)
T ss_dssp HHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CCCCSBCSSCT-------
T ss_pred HHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--ccccccccCcc-------
Confidence 9999999999 999999999988776666666899999999999999889999999886 33433332211
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++..++++...+.++..+++.+.+ .++.+.++..++.+++.+.|.+ +|+
T Consensus 231 -------~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~~~~~~~~~l~~~L~~-~g~ 281 (384)
T 1eg5_A 231 -------ERGLRSGTQNVPGIVGAARAMEIAVE-ELSEAAKHMEKLRSKLVSGLMN-LGA 281 (384)
T ss_dssp -------TTTTBCSCCCHHHHHHHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHHT-TTC
T ss_pred -------cccccCCCCChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHhCC-CCe
Confidence 12445678999999999999998654 6889999999999999999987 454
No 11
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=5e-35 Score=280.64 Aligned_cols=289 Identities=26% Similarity=0.300 Sum_probs=232.0
Q ss_pred cCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCc
Q 017640 52 RPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGE 131 (368)
Q Consensus 52 r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~ 131 (368)
+++|+.. ++.+|||+++.+++++.+++++.+.+.....+|+ +.+..+....+..+++|+++++++|.+++ +
T Consensus 10 ~~~~~~~-------~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~ 80 (432)
T 3a9z_A 10 GSVESPP-------NRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPS-SSYVAGRKAKDIINTARASLAKMIGGKPQ-D 80 (432)
T ss_dssp ---------------CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTT-CSSHHHHHHHHHHHHHHHHHHHHHTCCGG-G
T ss_pred ccccCCC-------CCcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCc-cCcHHHHHHHHHHHHHHHHHHHHcCCCcC-e
Confidence 3566665 6789999999999999999999999887655665 34455556678889999999999999754 9
Q ss_pred EEEeCCHHHHHHHHHHHccCCCC----CCCC-------------EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-C
Q 017640 132 IVFTKNATEAINLVAYSWGLSNL----KSGD-------------EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-D 193 (368)
Q Consensus 132 v~~t~g~t~a~~~~~~~~~~~~~----~~gd-------------~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~ 193 (368)
|++|+|+++++.+++.++..... ++|| .|+++..+|+++...+..+++..|++++.+++++ +
T Consensus 81 v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~ 160 (432)
T 3a9z_A 81 IIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVN 160 (432)
T ss_dssp EEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTT
T ss_pred EEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCccc
Confidence 99999999999999988710000 4675 4555555666666677777777899999999986 7
Q ss_pred CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC----------CEEEEecCCcCCcccccCCCCCccE
Q 017640 194 ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG----------AKVLVDACQSVPHMVVDVQGLDADF 263 (368)
Q Consensus 194 ~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g----------~~li~D~a~~~~~~~~~~~~~~~d~ 263 (368)
+.+|+++|++++++++++|++++++||||.++|+++|.++|+++| +++|+|++|+.+..++++...++|+
T Consensus 161 ~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~ 240 (432)
T 3a9z_A 161 GQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDF 240 (432)
T ss_dssp SSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSE
T ss_pred CCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCE
Confidence 889999999999989999999999999999999999999999999 9999999999887766655567999
Q ss_pred EEecCcCcCCCCcceEEEEcccc-cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 264 LVASSHKMCGPTGIGFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 264 ~~~s~~K~~g~~G~G~l~~~~~l-i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
+++|+||++|+. +|+++++++. ...+.+...|++. ..++..||++...++++.++++++.+ ++
T Consensus 241 ~~~s~~K~~g~~-~G~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~a~~aal~~~~~-~~ 304 (432)
T 3a9z_A 241 LTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQ--------------ERNFRPGTENTPMIAGLGKAADLVSE-NC 304 (432)
T ss_dssp EEEEGGGTTCCS-CEEEEETTBTTTBCCCCSCCSSCG--------------GGGTSCSCCCHHHHHHHHHHHHHHHH-HH
T ss_pred EEEehhHhcCCc-ceEEEEccccccCCcCceeecCCc--------------cccccCCCcCHHHHHHHHHHHHHHHh-hH
Confidence 999999999876 9999999886 5566666655543 14566789999999999999998776 68
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC
Q 017640 343 QKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+.+.++..++++++.+.|.+++|
T Consensus 305 ~~~~~~~~~~~~~l~~~L~~~~g 327 (432)
T 3a9z_A 305 ETYEAHMRDIRDYLEERLEAEFG 327 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHHHHHhccC
Confidence 89999999999999999988654
No 12
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=2.3e-34 Score=272.32 Aligned_cols=286 Identities=17% Similarity=0.143 Sum_probs=232.6
Q ss_pred CCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEE
Q 017640 54 DFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIV 133 (368)
Q Consensus 54 ~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~ 133 (368)
+||.+ ++.+|||+++.+++++.+++++.+.+.. + .++...+...++|+.+++++|.++ ++|+
T Consensus 2 ~fp~~-------~~~~yl~~~~~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~-~~v~ 63 (392)
T 2z9v_A 2 RYPEH-------ADPVITLTAGPVNAYPEVLRGLGRTVLY-----D-----YDPAFQLLYEKVVDKAQKAMRLSN-KPVI 63 (392)
T ss_dssp CCCTT-------SCCSEECSSSCCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHTTCSS-CCEE
T ss_pred CcccC-------CCcceeecCCCcCCCHHHHHHHhccccc-----c-----ccHHHHHHHHHHHHHHHHHhCCCC-CEEE
Confidence 57776 5668999999999999999998765421 1 123456778899999999999975 4999
Q ss_pred EeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc--ccCceE
Q 017640 134 FTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML--SRKTKL 211 (368)
Q Consensus 134 ~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l--~~~~~~ 211 (368)
+|+|+|+++.+++.++ +++||+|++++++|++.. +..+++..|++++.++.++++.+|+++|++++ .+++++
T Consensus 64 ~t~g~t~a~~~~~~~~----~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~ 137 (392)
T 2z9v_A 64 LHGEPVLGLEAAAASL----ISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITV 137 (392)
T ss_dssp ESSCTHHHHHHHHHHH----CCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCE
T ss_pred EeCCchHHHHHHHHHh----cCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcE
Confidence 9999999999999998 789999999999998863 45556667999999999888889999999999 457899
Q ss_pred EEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccC
Q 017640 212 VVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAM 290 (368)
Q Consensus 212 v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l 290 (368)
|++++++||||.++|+++|.++|++||+++|+|++|+.+..++++...++|++++|+|| ++|+.|+|++++++++++.+
T Consensus 138 v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l 217 (392)
T 2z9v_A 138 VSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKM 217 (392)
T ss_dssp EEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHH
T ss_pred EEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHh
Confidence 99999999999999999999999999999999999998887767666689999999999 67788999999999988776
Q ss_pred CCcccCCcceeecccCCC-CCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 291 PPFLGGGEMISDVFLDHS-TFAD-PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~-~~~~-~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
++...|.+. ...+.. .+.. ...++..++++...++++..+++.+.+.|++.+.++..++.+++.+.|.++ |++
T Consensus 218 ~~~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~ 292 (392)
T 2z9v_A 218 KANPLAPRA---SMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLS 292 (392)
T ss_dssp HTCTTSCCS---STTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred hhccCCCCc---eeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 543321000 000000 0000 123455789999999999999999988889999999999999999999886 654
No 13
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=100.00 E-value=3.7e-34 Score=273.07 Aligned_cols=300 Identities=19% Similarity=0.243 Sum_probs=236.5
Q ss_pred chhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC
Q 017640 46 SLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN 125 (368)
Q Consensus 46 ~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 125 (368)
+.+..+|++|+.. ++.+|||+++.++.|+.+.+++.+.+.....++... .....+..+...++++.+++++|
T Consensus 14 ~~~~~~r~~f~~~-------~~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~~~-~~~~~~~~~~~~~l~~~la~~~g 85 (416)
T 1qz9_A 14 DSLAPLRQQFALP-------EGVIYLDGNSLGARPVAALARAQAVIAEEWGNGLIR-SWNSAGWRDLSERLGNRLATLIG 85 (416)
T ss_dssp CTTGGGGGGBCCC-------TTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCGGG-HHHHTSGGGHHHHHHHHHHTTTT
T ss_pred chhHHHHHhCCCC-------CCeEeecCCCcCCCcHHHHHHHHHHHHHHHhccCcc-ccchhhHHHHHHHHHHHHHHHcC
Confidence 3567789999977 678999999999999999999999887533332110 01111223667789999999999
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHccCCCC----CCCCE-EEEcCCCCcccHHHHHHHHHHc--CCEEEEEeCCCCCCCCH
Q 017640 126 ASDSGEIVFTKNATEAINLVAYSWGLSNL----KSGDE-VILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDDESPDL 198 (368)
Q Consensus 126 ~~~~~~v~~t~g~t~a~~~~~~~~~~~~~----~~gd~-vl~~~~~~~s~~~~~~~~~~~~--g~~v~~v~~~~~~~~d~ 198 (368)
.+++ +|++|+|+++++..++.++. .+ ++||+ |++..++|+++...+..+++.. |++++.++. +
T Consensus 86 ~~~~-~v~~~~g~t~al~~al~~~~--~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~ 155 (416)
T 1qz9_A 86 ARDG-EVVVTDTTSINLFKVLSAAL--RVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS-------P 155 (416)
T ss_dssp CCTT-SEEECSCHHHHHHHHHHHHH--HHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS-------G
T ss_pred CCcc-cEEEeCChhHHHHHHHHhhc--ccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc-------H
Confidence 9754 89999999999998888761 02 78886 5666678888777766666666 999999986 7
Q ss_pred HHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcC-CCCcc
Q 017640 199 DKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGI 277 (368)
Q Consensus 199 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~G~ 277 (368)
++|++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.|..++++...++|++++|+||++ ++.|+
T Consensus 156 ~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~ 235 (416)
T 1qz9_A 156 EELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGS 235 (416)
T ss_dssp GGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTC
T ss_pred HHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCC
Confidence 88999998899999999999999999999999999999999999999999887766655567999999999964 56777
Q ss_pred -eEEEEcccccccCCCcccCCcceeecc--cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 017640 278 -GFLFGKSDLLSAMPPFLGGGEMISDVF--LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWII 354 (368)
Q Consensus 278 -G~l~~~~~li~~l~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~ 354 (368)
|++++++++++.+++...|+......+ .....+.....++..||++..+++++.++++.+.+.+++.+.++..++.+
T Consensus 236 ~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 315 (416)
T 1qz9_A 236 QAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTD 315 (416)
T ss_dssp CCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 999999999888887665542211100 11112222345677889999999999999998877789999999999999
Q ss_pred HHHHHHHhh
Q 017640 355 CSIIVIQER 363 (368)
Q Consensus 355 ~l~~~l~~~ 363 (368)
++.+.|.++
T Consensus 316 ~l~~~L~~~ 324 (416)
T 1qz9_A 316 LFIELVEQR 324 (416)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999999886
No 14
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.2e-34 Score=268.08 Aligned_cols=294 Identities=14% Similarity=0.156 Sum_probs=237.3
Q ss_pred cchhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc
Q 017640 45 VSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI 124 (368)
Q Consensus 45 ~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 124 (368)
..|+..+|++|+.+ +..+|+|+.+.+++++.+.+++.+.+.. .++....+..+++++.+++++
T Consensus 4 ~~~~~~~r~~f~~~-------~~~~~l~~~~~~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~~ 66 (386)
T 2dr1_A 4 MEFEEAFKEVYEMV-------KPKYKLFTAGPVACFPEVLEIMKVQMFS----------HRSKEYRKVHMDTVERLREFL 66 (386)
T ss_dssp -CCHHHHHHHHHHH-------SCCSEECCSSSCCCCHHHHHHTTSCCCC----------TTSHHHHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHhhc-------CccceeecCCCcCCcHHHHHHHhccccc----------ccCHHHHHHHHHHHHHHHHHh
Confidence 46899999999876 3347999999999999999887665321 112234678889999999999
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHh
Q 017640 125 NASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 125 ~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 204 (368)
|.+..+++++|+|+++|+..++.++ +++||+|++.+++|++.. +...++..|++++.++.++++.+|+++|+++
T Consensus 67 g~~~~~~v~~~~g~t~a~~~~~~~l----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~ 140 (386)
T 2dr1_A 67 EVEKGEVLLVPSSGTGIMEASIRNG----VSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPGKAVKPEDLDDA 140 (386)
T ss_dssp TCSSSEEEEESSCHHHHHHHHHHHH----SCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHH
T ss_pred CCCCCcEEEEeCChHHHHHHHHHHh----hcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCCCCCCHHHHHHH
Confidence 9973347999999999999999998 789999999999888742 5566677899999999988888999999999
Q ss_pred c--ccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCC-CcceEEE
Q 017640 205 L--SRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGP-TGIGFLF 281 (368)
Q Consensus 205 l--~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~-~G~G~l~ 281 (368)
+ .+++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+..++++...++|++++|+||+++. .|+|+++
T Consensus 141 l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~~ 220 (386)
T 2dr1_A 141 LRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIGA 220 (386)
T ss_dssp HHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEEE
T ss_pred HhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEEE
Confidence 9 568899999999999999999999999999999999999999988876677667899999999997764 4799999
Q ss_pred EcccccccCCCcccCCcceeecccCCCCC-CCCC-CCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHH
Q 017640 282 GKSDLLSAMPPFLGGGEMISDVFLDHSTF-ADPP-SRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSII 358 (368)
Q Consensus 282 ~~~~li~~l~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~ 358 (368)
+++++++.+++....+... +...+ .... .++..++++...++++..+++.+.+. +++.+.++.+++.+++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~ 295 (386)
T 2dr1_A 221 FSERFLEIAEKMPERGWYF-----DIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVRE 295 (386)
T ss_dssp ECHHHHHHHTTCTTCCSTT-----CHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ECHHHHHHHhcCCCCceEE-----eHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999887776432111100 00000 0000 13456789999999999999998887 789999999999999999
Q ss_pred HHHhhcCCC
Q 017640 359 VIQERHNTT 367 (368)
Q Consensus 359 ~l~~~~g~t 367 (368)
.|.++ |++
T Consensus 296 ~L~~~-g~~ 303 (386)
T 2dr1_A 296 GVREI-GLD 303 (386)
T ss_dssp HHHHT-TCC
T ss_pred HHHHc-CCe
Confidence 99887 654
No 15
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=2.8e-33 Score=264.96 Aligned_cols=297 Identities=15% Similarity=0.144 Sum_probs=235.9
Q ss_pred ccchhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH
Q 017640 44 SVSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF 123 (368)
Q Consensus 44 ~~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~ 123 (368)
.......+|++|+.+. ...+|+++.+.+++++.+.+++.+.+.. ..+....+..+++++.++++
T Consensus 16 ~~~~~~~~r~~~~~~~------~~~~~l~~~~~~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~ 79 (393)
T 1vjo_A 16 IISINDNQRLQLEPLE------VPSRLLLGPGPSNAHPSVLQAMNVSPVG----------HLDPAFLALMDEIQSLLRYV 79 (393)
T ss_dssp -CCCCCTTCCCCCSCC------CCCCEECSSSCCCCCHHHHHHHSSCCCC----------TTSHHHHHHHHHHHHHHHHH
T ss_pred eeeecchhhhcCCccC------CccceeccCCCCCCCHHHHHHHhccccc----------ccCHHHHHHHHHHHHHHHHH
Confidence 3455677889999763 3347999999999999999998765421 11223567788999999999
Q ss_pred cCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHH
Q 017640 124 INASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 124 ~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~ 203 (368)
+|.+++++|++|+|+++|+..++.++ +++||+|++.+|+|++. .+...++..|++++.++.++++.+|+++|++
T Consensus 80 ~g~~~~~~v~~t~g~t~al~~~~~~~----~~~gd~Vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~ 153 (393)
T 1vjo_A 80 WQTENPLTIAVSGTGTAAMEATIANA----VEPGDVVLIGVAGYFGN--RLVDMAGRYGADVRTISKPWGEVFSLEELRT 153 (393)
T ss_dssp HTCCCSCEEEESSCHHHHHHHHHHHH----CCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHH
T ss_pred hCCCCCcEEEEeCchHHHHHHHHHhc----cCCCCEEEEEcCChhHH--HHHHHHHHcCCceEEEecCCCCCCCHHHHHH
Confidence 99964227999999999999999998 78999999999988873 3556667789999999998888899999999
Q ss_pred hccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEE
Q 017640 204 MLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLF 281 (368)
Q Consensus 204 ~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~ 281 (368)
++++ ++++|++++++||||.+.|+++|.++|++||+++|+|++|++|..++++...++|++++|+||+++ +.|+|+++
T Consensus 154 ~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~ 233 (393)
T 1vjo_A 154 ALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFT 233 (393)
T ss_dssp HHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEE
T ss_pred HHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEE
Confidence 9988 899999999999999999999999999999999999999998887777777789999999999665 55699999
Q ss_pred EcccccccCCCc---ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Q 017640 282 GKSDLLSAMPPF---LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSII 358 (368)
Q Consensus 282 ~~~~li~~l~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~ 358 (368)
+++++++.++.. ..++........ .+ ....++..|+++...++++..+++.+.+.+++.++++..++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 309 (393)
T 1vjo_A 234 MSSRAIEKLQRRRTKVANWYLDMNLLG---KY-WGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWE 309 (393)
T ss_dssp ECHHHHHHHHTCSSCCSCSTTCHHHHH---HH-HSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred ECHHHHHHHhccCCCCCceecCcHhhh---hh-hccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 999887765321 111100000000 00 00124445689999999999999998777899999999999999999
Q ss_pred HHHhhcCCC
Q 017640 359 VIQERHNTT 367 (368)
Q Consensus 359 ~l~~~~g~t 367 (368)
.|.+. |++
T Consensus 310 ~L~~~-g~~ 317 (393)
T 1vjo_A 310 RLEDI-GLS 317 (393)
T ss_dssp HHHHT-TCC
T ss_pred HHHHc-CCc
Confidence 99886 654
No 16
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=5.5e-33 Score=262.87 Aligned_cols=284 Identities=15% Similarity=0.115 Sum_probs=226.9
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
++.+|+++.+..++++.+.+++.+.+.. + ......+...++++.+++++|.+++++|++|+|+|+|+..+
T Consensus 17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~ 86 (393)
T 2huf_A 17 TPNKLLMGPGPSNAPQRVLDAMSRPILG-----H-----LHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEAT 86 (393)
T ss_dssp CCCCEECSSSCCCCCHHHHHHTTSCCCC-----T-----TSHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHH
T ss_pred CCCeEEecCCCCCCCHHHHHHHHhhhcc-----C-----CCHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHH
Confidence 4556777777778899999888665321 1 12234677889999999999997533799999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASI 224 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~ 224 (368)
+.++ +++||+|++++++|++.. +...++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.+
T Consensus 87 ~~~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~ 160 (393)
T 2huf_A 87 LCNL----LEDGDVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQSLSLDEIRDALLIHKPSVLFLTQGDSSTGVL 160 (393)
T ss_dssp HHHH----CCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHH----hCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCCCCCHHHHHHHHhccCCcEEEEEccCCCcccc
Confidence 9998 789999999999998842 4455677899999999988888999999999988 89999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcc---cCCcce
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFL---GGGEMI 300 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~---~g~~~~ 300 (368)
+|+++|.++|++||+++|+|++|+.+..++++...++|++++|+||+ +|++|+|++++++++++.+++.. .++...
T Consensus 161 ~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (393)
T 2huf_A 161 QGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWD 240 (393)
T ss_dssp CCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGC
T ss_pred CCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEc
Confidence 99999999999999999999999988877777667899999999995 67889999999998887654331 110000
Q ss_pred eecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 301 SDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.....++. -.....++..++++..+++++..+++.+.+.+++.+.++..++++++.+.|.++ |++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 305 (393)
T 2huf_A 241 MSLVGDYW-GCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDA-GFE 305 (393)
T ss_dssp HHHHHHHT-TCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred hHHHHhhh-ccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 00000000 001224667789999999999999999887789999999999999999999886 654
No 17
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=2e-34 Score=269.54 Aligned_cols=279 Identities=15% Similarity=0.079 Sum_probs=230.5
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCC--cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCCHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRG--IHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~-t~g~t~a~~ 143 (368)
+.--||.++.+++|++|++++.+.+..++.++... .+..+..+.+.++++|+.+++++|++++++|+| |.|+|++++
T Consensus 12 ~~~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n 91 (377)
T 3e77_A 12 DLGTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFS 91 (377)
T ss_dssp ---CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHH
T ss_pred CcccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHH
Confidence 44568888899999999999999998777665421 144566788999999999999999976558999 589999999
Q ss_pred HHHHHccCCCCC--CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 144 LVAYSWGLSNLK--SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 144 ~~~~~~~~~~~~--~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
+++.++ +. +||++++...++++. .+...+++.|..++.++.++++.++++.++.++++++++|++++..|.|
T Consensus 92 ~a~~~l----~~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~i~~~t~lV~~~h~et~t 165 (377)
T 3e77_A 92 AVPLNL----IGLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKLGSYTKIPDPSTWNLNPDASYVYYCANETVH 165 (377)
T ss_dssp HHHHHH----GGGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCCSSSCSCCCGGGCCCCTTCSCEEEESEETTT
T ss_pred HHHHhc----cCCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccCCCcCCCCChHHhccCCCccEEEEeCccCch
Confidence 999998 44 489999888888774 4677788889888888887666678888888888899999999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCccee
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~ 301 (368)
|.+.|+ +|+++|+++++|++|++|..++|+++++ ++++|.||++||+|+|++++++++++.++|...+.
T Consensus 166 G~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~---- 234 (377)
T 3e77_A 166 GVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSV---- 234 (377)
T ss_dssp TEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGG----
T ss_pred heEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEecccccCCCccEEEEEcHHHHhhccCCCCch----
Confidence 999998 4788999999999999999999998866 58899999999999999999999998887654321
Q ss_pred ecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.++.... ......||||+..++++..+++++.+. |++++++|..++++++++.|.+++|++
T Consensus 235 ---~~~~~~~--~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~ 296 (377)
T 3e77_A 235 ---LEYKVQA--GNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 296 (377)
T ss_dssp ---GCHHHHH--TTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSE
T ss_pred ---hhHHHHh--hcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 1110000 112346899999999999999999999 799999999999999999999987753
No 18
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=2.7e-34 Score=270.03 Aligned_cols=273 Identities=15% Similarity=0.084 Sum_probs=210.5
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCC--cchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCCHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRG--IHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAINL 144 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~-t~g~t~a~~~ 144 (368)
.+||++++++++|+.|++++.+++..++.++... .+..+..+.+.++++|+.+++++|++++++|+| |+|+|+++++
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ 106 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAG 106 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHH
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHH
Confidence 3799999999999999999999888776665421 233455667889999999999999975457988 6899999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCC-CCHHHHHHhcccCceEEEEccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDES-PDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~-~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
++.++ +++||++++...++.+. .|...+++.| ++..++.+ ++|. +++++++.++++++++|++++..|.|
T Consensus 107 ai~~l----~~~gd~v~~~~~~~~~~--~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~et~t 179 (386)
T 3qm2_A 107 VPLNL----LGDKTTADYVDAGYWAA--SAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPNETID 179 (386)
T ss_dssp HHHHH----CTTCCEEEEEESSHHHH--HHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSEETTT
T ss_pred HHHhc----cCCCCeEEEEeCCHHHH--HHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECCcCCc
Confidence 99998 78999988776666664 4667778888 99999987 5664 78888999999999999999999999
Q ss_pred ccc-cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcce
Q 017640 222 ASI-LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMI 300 (368)
Q Consensus 222 G~~-~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~ 300 (368)
|.+ .|+++|. +|+++++|++|++|..++|+++++ ++++|.||++||+|+|++++++++++.+.|.....
T Consensus 180 G~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~~--~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~--- 249 (386)
T 3qm2_A 180 GIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRYG--VIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSI--- 249 (386)
T ss_dssp TEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGCS--EEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGG---
T ss_pred CEecCchhhhc-----CCCEEEEEcccccCCCCCCccccC--EEEEecccccCCCccEEEEECHHHHhhhcccCCcH---
Confidence 996 8899885 899999999999999999998865 67799999999999999999999998887654311
Q ss_pred eecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 301 SDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.++... .+.....||+|+..++++..+++++.+. |++++.++..++++++++.|.++
T Consensus 250 ----~~~~~~--~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~ 307 (386)
T 3qm2_A 250 ----LDYTVL--NDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS 307 (386)
T ss_dssp ----GCHHHH--HHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ----HHHHHH--hhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC
Confidence 000000 0122335799999999999999999999 89999999999999999999876
No 19
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=4.5e-32 Score=257.97 Aligned_cols=282 Identities=14% Similarity=0.115 Sum_probs=227.9
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
.++...++..+++.+.+++.+... ....+...+..+++++++++++|.+.++.+++++|+++|+..++.+
T Consensus 14 ~~~~~pgp~~~~~~v~~a~~~~~~----------~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~ 83 (411)
T 3nnk_A 14 RLLMGPGPINADPRVLRAMSSQLI----------GQYDPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVS 83 (411)
T ss_dssp CEEESSSCCCCCHHHHHHHTSCCC----------CTTCHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHH
T ss_pred ceeecCCCCCCCHHHHHHhhcccc----------ccccHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHH
Confidence 477777777889999888764321 1122344577889999999999998653488999999999999999
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l 227 (368)
+ +++||+|++.+++|++.. +...++..|++++.++.+.++.+|+++|++++++ ++++|++++++||||.+.|+
T Consensus 84 ~----~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l 157 (411)
T 3nnk_A 84 A----IRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPL 157 (411)
T ss_dssp H----CCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCC
T ss_pred h----cCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccH
Confidence 8 899999999999887743 4566677899999999988899999999999986 89999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcc------cCCcce
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFL------GGGEMI 300 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~------~g~~~~ 300 (368)
++|.++|++||+++|+|++|+.+..+++....++|++++|+||+ +|+.|+|++++++++++.+.+.. .|++..
T Consensus 158 ~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 237 (411)
T 3nnk_A 158 AELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHR 237 (411)
T ss_dssp TTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCC
T ss_pred HHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccc
Confidence 99999999999999999999998888888878899999999994 78889999999998876554322 222211
Q ss_pred ee----cccCCCCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 301 SD----VFLDHSTFA-----DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 301 ~~----~~~~~~~~~-----~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.. ....+.... ....++..+|++...++++..+++.+.+.|++.+.++..++.+++.+.|.+. |++
T Consensus 238 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (411)
T 3nnk_A 238 DGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-GLE 312 (411)
T ss_dssp CCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred cccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 00 000000000 0134667889999999999999999998899999999999999999999886 543
No 20
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=1.4e-32 Score=257.94 Aligned_cols=271 Identities=17% Similarity=0.160 Sum_probs=212.4
Q ss_pred CCeEEeccC-CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHH-HHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNA-ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKK-VAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~-~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~-la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
++++|||.+ ..+++++.+.+++.+.+.......+...+..++...+...++++. +++++|.+ +|++|+|+|+|+.
T Consensus 7 ~~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~---~v~~~~g~t~a~~ 83 (371)
T 2e7j_A 7 KDFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVTNGAREAKF 83 (371)
T ss_dssp -CCEECCHHHHTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS---EEEEESSHHHHHH
T ss_pred CCcEEecccccCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC---EEEEeCChHHHHH
Confidence 578999994 466889999999998876532111100122233345667789999 99999986 8999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe--CCCCCCCCHHHHHHhcc-----cCceEEEEcc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN--LNDDESPDLDKLKEMLS-----RKTKLVVIHH 216 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~--~~~~~~~d~~~l~~~l~-----~~~~~v~~~~ 216 (368)
.++.++ +++||+|++++++|++.... ++..|++++.++ .++++.+|+++|+++++ +++++|++++
T Consensus 84 ~~~~~~----~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 84 AVMHSL----AKKDAWVVMDENCHYSSYVA----AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp HHHHHH----CCTTCEEEEETTCCHHHHHH----HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred HHHHHH----hCCCCEEEEccCcchHHHHH----HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 999998 78999999999999986654 456799999999 77788999999999998 6899999999
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcC-CCCcceEEEEccccccc-CCCcc
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSA-MPPFL 294 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~-l~~~~ 294 (368)
++||||.++|+++|.++|++||+++|+|++|+.+..++++...++|++++|+||++ ++.++|++++++++++. +++..
T Consensus 156 ~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~ 235 (371)
T 2e7j_A 156 PDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSE 235 (371)
T ss_dssp SCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCS
T ss_pred CCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccc
Confidence 99999999999999999999999999999999887766655567899999999955 45569999999998887 77654
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH--HHHHHHHHHHHHhhcCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE--VKWIICSIIVIQERHNT 366 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~--~~l~~~l~~~l~~~~g~ 366 (368)
.++.. ...++.++++..+++++..+++++.. .+.++. .++++++.+.|.+. |+
T Consensus 236 ~~~~~--------------~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~ 290 (371)
T 2e7j_A 236 KYKNK--------------EVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GI 290 (371)
T ss_dssp SCTTS--------------BGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TC
T ss_pred cCccc--------------ccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-Cc
Confidence 42211 01244678999999888889988765 567777 88889999988876 54
No 21
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=4.7e-32 Score=258.26 Aligned_cols=276 Identities=14% Similarity=0.155 Sum_probs=221.1
Q ss_pred CCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcE-EEeCCHHHHHHHHHHHccCC
Q 017640 74 AATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEI-VFTKNATEAINLVAYSWGLS 152 (368)
Q Consensus 74 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v-~~t~g~t~a~~~~~~~~~~~ 152 (368)
..+...++.+.+++.+.. .........+..+++++.+++++|.+++ .+ ++++|+|+++..++.++
T Consensus 17 p~p~~~~~~v~~a~~~~~----------~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~~~~~~s~t~al~~~~~~l--- 82 (416)
T 3isl_A 17 PGPVEVDPRVLRVMSTPV----------VGQFDPAFTGIMNETMEMLRELFQTKNR-WAYPIDGTSRAGIEAVLASV--- 82 (416)
T ss_dssp SSSCCCCHHHHHHTTSCC----------CCTTSHHHHHHHHHHHHHHHHHTTCCCS-EEEEEESCHHHHHHHHHHHH---
T ss_pred CCCcCcCHHHHHHhcccC----------CCCccHHHHHHHHHHHHHHHHHhCCCCC-cEEEecCcHHHHHHHHHHHh---
Confidence 344466777777664411 1122234577888999999999999865 55 48899999999999998
Q ss_pred CCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc-cCceEEEEcccccccccccCHHHHH
Q 017640 153 NLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLASILPIEEIV 231 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~l~~i~ 231 (368)
+++||+|++.+++|++.. +...++..|++++.++.++++.+|+++|+++++ +++++|++++++||||.+.|+++|.
T Consensus 83 -~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~ 159 (416)
T 3isl_A 83 -IEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIG 159 (416)
T ss_dssp -CCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHH
T ss_pred -cCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHH
Confidence 899999999999888743 566677889999999999889999999999998 5899999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCcc---cCCcce-------
Q 017640 232 HWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFL---GGGEMI------- 300 (368)
Q Consensus 232 ~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~---~g~~~~------- 300 (368)
++|++||+++|+|++|+.+..+++....++|++++|+|| ++|+.|+|++++++++++.+.+.. .||..+
T Consensus 160 ~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~ 239 (416)
T 3isl_A 160 EACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALS 239 (416)
T ss_dssp HHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC-----------------
T ss_pred HHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhcc
Confidence 999999999999999999988888887889999999999 588999999999999887766432 333221
Q ss_pred -----eecccCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 301 -----SDVFLDHSTFA--DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 301 -----~~~~~~~~~~~--~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.....+...+. ....++..||++...++++.++++.+...|++.+.++..++++++.+.|.+. |++
T Consensus 240 gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~ 312 (416)
T 3isl_A 240 GNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM-GLR 312 (416)
T ss_dssp -CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred CCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 11111100000 0235677889999999999999999999899999999999999999999985 654
No 22
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1e-31 Score=250.19 Aligned_cols=268 Identities=16% Similarity=0.171 Sum_probs=217.8
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
|+.++++.++++.+++++.+.+.. ..++...+...++|+++++++|.++ +++++|+|+++|+..++.++
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~l~~~la~~~g~~~-~~i~~~~g~t~a~~~~~~~~ 71 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQLH----------HRTEAAREVFLKARGLLREAFRTEG-EVLILTGSGTLAMEALVKNL 71 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCCCC----------TTSHHHHHHHHHHHHHHHHHHTCSS-EEEEEESCHHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHhccCCCC----------ccCHHHHHHHHHHHHHHHHHhCCCC-ceEEEcCchHHHHHHHHHhc
Confidence 667777788899999998766421 1233456778899999999999975 48999999999999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEE 229 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~ 229 (368)
+++||+|++.+++|++.. +...++..|++++.++.++++.+|+++|++ +++++|++++++||||.++|+++
T Consensus 72 ----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~ 142 (352)
T 1iug_A 72 ----FAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDTPRPEDVAK---EGYAGLLLVHSETSTGALADLPA 142 (352)
T ss_dssp ----CCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCCCTTTSCC---SSCSEEEEESEETTTTEECCHHH
T ss_pred ----cCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHhc---cCCcEEEEEEecCCcceecCHHH
Confidence 789999999999999865 445566779999999998888889988877 67899999999999999999999
Q ss_pred HHHHHHhc--CCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCcccCCcceeecccC
Q 017640 230 IVHWSHDV--GAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 230 i~~l~~~~--g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~ 306 (368)
|.++|++| |+++|+|++|+.+..++++...+.|++++|+|| ++|+.|+|++++++++++.+++ .++.. ... .
T Consensus 143 i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~--~~~~~--~~~-~ 217 (352)
T 1iug_A 143 LARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP--RGYYL--DLA-R 217 (352)
T ss_dssp HHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC--CSSTT--CHH-H
T ss_pred HHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhC--CCcee--eHH-H
Confidence 99999999 999999999998877777666679999999999 7788899999999998877665 11110 000 0
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
. +.....++..++++...+.++..+++.+.+. ++.++++..++++++.+.|+++ |+
T Consensus 218 ~--~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~ 273 (352)
T 1iug_A 218 E--LKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GL 273 (352)
T ss_dssp H--HHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred H--HhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 0 0000123446799999999999999988776 8899999999999999999886 54
No 23
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=1.9e-31 Score=252.61 Aligned_cols=280 Identities=13% Similarity=0.135 Sum_probs=221.3
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
++.+++.+.+..++++.+.+++.+.+.. ..+........++|+.+++++|.+++++|++|+|+++++..+
T Consensus 16 ~~~~~~~~~~p~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~ 85 (396)
T 2ch1_A 16 IPEKIMMGPGPSNCSKRVLTAMTNTVLS----------NFHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAM 85 (396)
T ss_dssp CCCCBCCSSSSCCCCHHHHHHTTSCCCC----------TTCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHH
T ss_pred CCcceeecCCCCCCCHHHHHHhcccccc----------CCChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHH
Confidence 3344666666667888888887654310 112233456789999999999997533799999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASI 224 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~ 224 (368)
+.++ +++||+|++.+++|++.. +...++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.+
T Consensus 86 ~~~~----~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 159 (396)
T 2ch1_A 86 LSNL----LEEGDRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLTHGDSSSGLL 159 (396)
T ss_dssp HHHH----CCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESEETTTTEE
T ss_pred HHHh----cCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCcee
Confidence 9998 789999999999998842 3445677899999999988888999999999987 89999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCc-------ccC
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPF-------LGG 296 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~-------~~g 296 (368)
+|+++|.++|++||+++|+|++|+++..++++..+++|+++.|+|| ++++.|+|++++++++++.+... ..+
T Consensus 160 ~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (396)
T 2ch1_A 160 QPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWD 239 (396)
T ss_dssp CCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGC
T ss_pred cCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEec
Confidence 9999999999999999999999998887777777788999999999 56688899999999887765432 111
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
....... +. .....++..+|++...++++..+++.+.+.+++.+.++..++++++.+.|.++ |++
T Consensus 240 ~~~~~~~---~~--~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 304 (396)
T 2ch1_A 240 LLLLGNY---WG--CYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD 304 (396)
T ss_dssp HHHHHHH---TT--CSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred hHHHHHh---hh--hhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 0000000 00 01123556789999999999999998877789999999999999999999887 654
No 24
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=1.5e-31 Score=252.69 Aligned_cols=281 Identities=15% Similarity=0.140 Sum_probs=226.3
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
++...++..+++.+.+++.+... . .......+...+++++++++++.+.+++|++|+|+++++..++.++
T Consensus 25 ~~~~p~p~~~~~~v~~a~~~~~~--------~--~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~ 94 (393)
T 3kgw_A 25 LLLGPGPSNLAPRVLAAGSLRMI--------G--HMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNL 94 (393)
T ss_dssp EECSSSCCCCCHHHHHHTTCCCC--------C--TTSHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHH
T ss_pred eeccCCCCCCCHHHHHHhccccc--------C--cccHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhc
Confidence 66666677889999888765321 0 1123345777899999999999986546999999999999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~ 228 (368)
+++||+|++..+.|++. .+...++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|++
T Consensus 95 ----~~~gd~vl~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~ 168 (393)
T 3kgw_A 95 ----LEPGDSFLTGTNGIWGM--RAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLD 168 (393)
T ss_dssp ----CCTTCEEEEEESSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCT
T ss_pred ----CCCCCEEEEEeCCchhH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHH
Confidence 89999999998877643 24566778899999999988888999999999988 899999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
+|.++|++||+++|+|++|+.+..+++....+.|++++|+|| ++|+.|+|++++++++++.+.+...++..........
T Consensus 169 ~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (393)
T 3kgw_A 169 GFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYL 248 (393)
T ss_dssp THHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHH
T ss_pred HHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHH
Confidence 999999999999999999998888777777789999999999 5578889999999998887765443322110000000
Q ss_pred -CCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 308 -STF-ADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 308 -~~~-~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..+ .....++..++++...++++..+++.+.+.+++.+.++..++.+++.+.|+++ |++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 309 (393)
T 3kgw_A 249 AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLK 309 (393)
T ss_dssp HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 000 01223667889999999999999999998899999999999999999999987 543
No 25
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=2.3e-31 Score=250.57 Aligned_cols=273 Identities=16% Similarity=0.202 Sum_probs=220.3
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC-CcEEEeCCHHHHHHHHHHHcc
Q 017640 72 DNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS-GEIVFTKNATEAINLVAYSWG 150 (368)
Q Consensus 72 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~~v~~t~g~t~a~~~~~~~~~ 150 (368)
...++.++++.+.+++.+.+.. ..+....+..+++++++++++|.+.+ ++|++|+|+++++. ++.++
T Consensus 6 ~~~gp~~~~~~v~~a~~~~~~~----------~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~- 73 (384)
T 3zrp_A 6 LHVGPTTIKEDVLVAGLENNVG----------FTSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL- 73 (384)
T ss_dssp CCSSCSCCCHHHHHHTTCCSCC----------TTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG-
T ss_pred ccCCCCCCCHHHHHHhhccccc----------cccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh-
Confidence 3445567888888887655321 12334577888999999999999862 48999999999999 88877
Q ss_pred CCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHH
Q 017640 151 LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEE 229 (368)
Q Consensus 151 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~ 229 (368)
+++||+|++.+++|++. .+..+++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|+++
T Consensus 74 ---~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~ 148 (384)
T 3zrp_A 74 ---LKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKD 148 (384)
T ss_dssp ---CCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHH
T ss_pred ---cCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHH
Confidence 89999999999988773 36666778899999999998899999999999988 8999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcC-CCCcceEEEEcccccccC-CCcccCCcceeecccCC
Q 017640 230 IVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAM-PPFLGGGEMISDVFLDH 307 (368)
Q Consensus 230 i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l-~~~~~g~~~~~~~~~~~ 307 (368)
|.++|++||+++|+|++|+.+..+++....++|++++|+||++ |+.|+|++++++++++.+ ++....... .+.
T Consensus 149 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~-----~~~ 223 (384)
T 3zrp_A 149 VINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYY-----LDL 223 (384)
T ss_dssp HHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCST-----TCH
T ss_pred HHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCccc-----ccH
Confidence 9999999999999999999998887787778999999999965 688899999999988776 332111000 000
Q ss_pred CCCCCCC------CCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 308 STFADPP------SRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 308 ~~~~~~~------~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..+.... ..+..|+++...++++..+++.+...+++.+.++..++.+++.+.|.++ |++
T Consensus 224 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 288 (384)
T 3zrp_A 224 RNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE 288 (384)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 0000000 1222369999999999999999998899999999999999999999987 654
No 26
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.2e-31 Score=249.47 Aligned_cols=271 Identities=15% Similarity=0.159 Sum_probs=216.1
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHHHHHHHc
Q 017640 71 LDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 71 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
+.+.++.++++.+.+++.+.+.. + .++...+...++|+++++++|.+ +++++++|+|+++|+..++.++
T Consensus 3 ~~~~gp~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~ 72 (353)
T 2yrr_A 3 LLTPGPTPIPERVQKALLRPMRG-----H-----LDPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANL 72 (353)
T ss_dssp ECSSSSCCCCHHHHGGGGSCCCC-----T-----TCHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTC
T ss_pred cCCCCCCCCCHHHHHHHhccccc-----c-----cCHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHh
Confidence 34445567889999888765431 1 12344677889999999999986 3348999999999999999887
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~ 228 (368)
.+ |+|++++++|++. .+...++..|++++.++.++++.+|+++|++++++ ++++|++++++||||.++|++
T Consensus 73 ----~~--d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 144 (353)
T 2yrr_A 73 ----DR--GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEPVDPEAVARALKRRRYRMVALVHGETSTGVLNPAE 144 (353)
T ss_dssp ----SC--CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHH
T ss_pred ----cC--CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecCHH
Confidence 44 8899999999886 35666678899999999988888999999999988 899999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
+|.++|++||+++|+|++|+.+..++++...+.|++++|+|| ++|++|+|++++++++++.++. ..++.......
T Consensus 145 ~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~~--- 220 (353)
T 2yrr_A 145 AIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRGWYLDLARV--- 220 (353)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSCSTTCHHHH---
T ss_pred HHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCCccccHHHH---
Confidence 999999999999999999998877666555678999999999 5678889999999998887763 11110000000
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
... ....+..++++...+.++..+++.+.+.|++.+.++..++++++.+.|++. |+
T Consensus 221 ~~~--~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 276 (353)
T 2yrr_A 221 AEH--WERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GF 276 (353)
T ss_dssp HHH--HTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hhh--hhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 000 002334668999999999999999988889999999999999999999886 54
No 27
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=5.8e-32 Score=252.67 Aligned_cols=281 Identities=15% Similarity=0.149 Sum_probs=221.6
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
++.+.++..+|+.+.+++.+.+.... .+.......+.+..+++++.+++++|.+.+++|++|+|+|+|+.+++.++
T Consensus 6 ~~~~p~p~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l 81 (362)
T 3ffr_A 6 IYFTPGPSELYPTVRQHMITALDEKI----GVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNC 81 (362)
T ss_dssp EEECSSSCCCCTTHHHHHHHHHHTTT----TTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHH
T ss_pred eeccCCCcCCCHHHHHHHHHHhcCCc----cCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhc
Confidence 44555667788999988888776421 01122345567888999999999999975558999999999999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEE 229 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~ 229 (368)
.++ .+++..+.|++. .+...++..|++++.++.++++.+|+++|+ +++++++|++++++||||.++|+++
T Consensus 82 ----~~~--~~i~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~ 151 (362)
T 3ffr_A 82 ----VEK--KSFHCVNGSFSK--RFYEFAGELGREAYKEEAAFGKGFYPADIT--VPADAEIICLTHNETSSGVSMPVED 151 (362)
T ss_dssp ----CSS--EEEEEECSHHHH--HHHHHHHHTTCEEEEEECCTTCCCCGGGCC--CCTTCCEEEEESEETTTTEECCHHH
T ss_pred ----cCC--cEEEEcCcHHHH--HHHHHHHHhCCCeEEEecCCCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHH
Confidence 566 555555444442 345567788999999999888899999998 7789999999999999999999999
Q ss_pred HHHHHHhc-CCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCC
Q 017640 230 IVHWSHDV-GAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 230 i~~l~~~~-g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
|.++|++| |+++|+|++|+.+..+++... .|++++|+||+++ ++|+|++++++++++.+.+...||+...... +.
T Consensus 152 i~~la~~~p~~~li~D~a~~~~~~~~~~~~--~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~-~~ 228 (362)
T 3ffr_A 152 INTFRDKNKDALIFVDAVSSLPYPKFDWTK--IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYH-TI 228 (362)
T ss_dssp HTTSGGGSTTSEEEEECTTTTTSSCCCTTS--CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTT-SH
T ss_pred HHHHHHhCCCCEEEEecccccCCcccChhH--CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccc-cH
Confidence 99999999 999999999999887776654 8999999999887 8999999999999888876665554322111 10
Q ss_pred CCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 308 STFAD-PPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 308 ~~~~~-~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..+.. .......++++...++++..+++++...|++.+.++..++++++.+.|.+++|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 289 (362)
T 3ffr_A 229 PSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS 289 (362)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence 00000 0112336799999999999999998888899999999999999999999887753
No 28
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=4.4e-31 Score=246.05 Aligned_cols=271 Identities=16% Similarity=0.138 Sum_probs=215.0
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcc---hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCCHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIH---FLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAINL 144 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~-t~g~t~a~~~ 144 (368)
+|+-+++++++|+.|++++.+.+..++.++. +.+ ..+..+.+.++++|+.+++++|++++++|+| |+|+|+++++
T Consensus 6 ~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~-s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~ 84 (361)
T 3m5u_A 6 KINFSAGPSTLPLEILEQAQKELCDYQGRGY-SIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAM 84 (361)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSGGGSSS-CGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred eEeecCCCCCCcHHHHHHHHHHHHhcccCCc-eeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHH
Confidence 5666777889999999999998887766653 332 3355678999999999999999975558888 9999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCC--CCHHHHHHhcccCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDES--PDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~--~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
++..+ + +||++++....+.+. .+...+++.|++++.++.++++. ++++. + |++++++|++++..|.||
T Consensus 85 ~~~~~----~-~~~~~~~i~~~~~~~--~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~~~e~~tG 154 (361)
T 3m5u_A 85 IPMNL----A-LNGVCEYANTGVWTK--KAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYICSNNTIYG 154 (361)
T ss_dssp HHHHH----C-CSSCEEEEECSHHHH--HHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEESEETTTT
T ss_pred HHHhc----C-CCCeEEEEeCCHHHH--HHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEeCCCCCcc
Confidence 99998 5 677653332233333 46666788899999999988774 56666 4 888999999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceee
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~ 302 (368)
.+.|. +++ +|+++++|++|++|..++|+++ .|++++|.||++||+|+|++++++++++.+.|...+. .
T Consensus 155 ~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~~--~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~-~--- 222 (361)
T 3m5u_A 155 TQYQN-----YPK-TKTPLIVDASSDFFSRKVDFSN--IALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPS-M--- 222 (361)
T ss_dssp EECSS-----CCC-CSSCEEEECGGGTTSSCCCCTT--EEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCG-G---
T ss_pred eeCCc-----ccc-cCCEEEEEcccccCCCCCCccc--CCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCc-e---
Confidence 99772 344 4999999999999999999985 7999999999999999999999999987766521110 0
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++.... ......||||+..++++..+++++.+. |++++.+|..++.+++++.|.++.|+
T Consensus 223 --~~~~~~~--~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~ 283 (361)
T 3m5u_A 223 --LNYLTHA--ENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGF 283 (361)
T ss_dssp --GCHHHHH--HTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred --eehHHHh--hcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 0000000 112334799999999999999999999 89999999999999999999987654
No 29
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=5.6e-30 Score=240.77 Aligned_cols=272 Identities=11% Similarity=0.057 Sum_probs=213.4
Q ss_pred ccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEE-EeCCHHHHHHHHHHHcc
Q 017640 72 DNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIV-FTKNATEAINLVAYSWG 150 (368)
Q Consensus 72 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~-~t~g~t~a~~~~~~~~~ 150 (368)
-..++.++|+.+.+++.+.+. .+ ......+..+++++.+++++|.+.+.+++ +|+|+++++..++.++
T Consensus 23 ~~pgp~~~~~~v~~a~~~~~~-----~~-----~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~- 91 (376)
T 3f0h_A 23 FTVGPVMSSEEVRAIGAEQVP-----YF-----RTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNC- 91 (376)
T ss_dssp CSSSSCCCCHHHHHHHTSCCC-----CC-----SSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHH-
T ss_pred ecCCCCCCcHHHHHHhcCCCC-----CC-----CCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhc-
Confidence 334456788899888865431 11 12344577889999999999997543554 5899999999999998
Q ss_pred CCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHH
Q 017640 151 LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEI 230 (368)
Q Consensus 151 ~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i 230 (368)
+++||+|++.++.|++.. +...++..|++++.++.+.++.+|+++|++++++++++|++++++||||.++|+++|
T Consensus 92 ---~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 166 (376)
T 3f0h_A 92 ---FTKKDKVLVIDGGSFGHR--FVQLCEIHEIPYVALKLEHGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMI 166 (376)
T ss_dssp ---CCTTCCEEEEESSHHHHH--HHHHHHHTTCCEEEEECCTTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHH
T ss_pred ---cCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCCCCCHHHHHHhhccCceEEEEecccCCcceecCHHHH
Confidence 789999999998777743 345567789999999998888999999999998899999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCC
Q 017640 231 VHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHST 309 (368)
Q Consensus 231 ~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~ 309 (368)
.++|++||+++|+|++|+.+..+++....++|++++|+||+++ ++|+|++++++++++.+.+...++..... .. .
T Consensus 167 ~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-- 242 (376)
T 3f0h_A 167 GEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDL-KD-A-- 242 (376)
T ss_dssp HHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCH-HH-H--
T ss_pred HHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecH-HH-H--
Confidence 9999999999999999998887777666779999999999877 88999999999988776543221110000 00 0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 310 FADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 310 ~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...........+++...++++.++++.+.+. +++.+.++..++++++.+.|.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (376)
T 3f0h_A 243 LKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL 297 (376)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred HhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 0000011223478888889999999999887 68999999999999999998765
No 30
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.97 E-value=3.7e-29 Score=233.82 Aligned_cols=277 Identities=16% Similarity=0.201 Sum_probs=210.5
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHH-HHHHHHHHHHHHHcCCCC-CCcEEEeCCHHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKAT-DEYELARKKVAAFINASD-SGEIVFTKNATEAINLV 145 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~a~~~~ 145 (368)
++.++.+ +...++.+.+++.+.+ . + . ..... +...++|+++++++|.+. .+++++|+|+++|+..+
T Consensus 5 ~~~~~~g-p~~~~~~v~~a~~~~~----~--~----~-~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~ 72 (366)
T 1m32_A 5 YLLLTPG-PLTTSRTVKEAMLFDS----C--T----W-DDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAV 72 (366)
T ss_dssp CEECSSS-SCCCCHHHHHTTCCCC----C--T----T-SHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHH
T ss_pred cccccCC-CcCCCHHHHHHHhhhh----c--C----C-CHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHH
Confidence 3455555 4468889998886631 0 1 1 11123 567789999999999431 13799999999999999
Q ss_pred HHHccCCCCCCCCEEEEcC-CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--CceEEEEcccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTV-AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--KTKLVVIHHISNMLA 222 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--~~~~v~~~~~~n~tG 222 (368)
+.++ .++||+|++.+ +.|++. +...++..|++++.++.++++.+|+++|++++++ ++++|++++++||||
T Consensus 73 ~~~~----~~~gd~vi~~~~~~~~~~---~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG 145 (366)
T 1m32_A 73 LGSA----LGPQDKVLIVSNGAYGAR---MVEMAGLMGIAHHAYDCGEVARPDVQAIDAILNADPTISHIAMVHSETTTG 145 (366)
T ss_dssp HHHS----CCTTCCEEEEESSHHHHH---HHHHHHHHTCCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEESEETTTT
T ss_pred HHHh----cCCCCeEEEEeCCCccHH---HHHHHHHhCCceEEEeCCCCCCCCHHHHHHHHhcCCCeEEEEEecccCCcc
Confidence 9998 68899887775 544442 3445566799999999988888999999999976 478999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcccCCccee
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFLGGGEMIS 301 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~~g~~~~~ 301 (368)
.++|+++|.++|++||+++|+|++|+.+..++++...++|++++|+||+ +|+.|+|++++++++++.+.+...+....
T Consensus 146 ~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~- 224 (366)
T 1m32_A 146 MLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLD- 224 (366)
T ss_dssp EECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTC-
T ss_pred eecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCcccc-
Confidence 9999999999999999999999999988877777666799999999995 57888999999999888776532111000
Q ss_pred ecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
....+..+ ........++++...++++..+++.+.+.| ++.+.++.+++.+++.+.|.+. |++
T Consensus 225 -~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~ 288 (366)
T 1m32_A 225 -LYAQWRCM-EDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFN 288 (366)
T ss_dssp -HHHHHHHH-HHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred -HHHHHhhh-cccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCe
Confidence 00000000 000011235899999999999999988877 8999999999999999999876 543
No 31
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.97 E-value=2.3e-29 Score=237.13 Aligned_cols=281 Identities=17% Similarity=0.127 Sum_probs=209.7
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC---CCcEEEeCCHHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD---SGEIVFTKNATEAINLVA 146 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~---~~~v~~t~g~t~a~~~~~ 146 (368)
++...++..+++.+.+++.+.... + ......+...++++.++++++... +++|++|+|+|+++..++
T Consensus 7 ~~~~p~p~~~~~~v~~a~~~~~~~-----~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~ 76 (385)
T 2bkw_A 7 TLLIPGPIILSGAVQKALDVPSLG-----H-----TSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFA 76 (385)
T ss_dssp EECSSSSCCCCHHHHHTTSCCCCC-----T-----TSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHH
T ss_pred eeecCCCcCchHHHHHHHhccccc-----c-----CCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHH
Confidence 444555667788888887654221 1 122234456678889999988751 248999999999999999
Q ss_pred HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CCCCCCCHHHHHHhccc-CceEEEEcccccccccc
Q 017640 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-NDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASI 224 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~ 224 (368)
.++.. ..++||+|++.++.++... +...++..|++++.++. ++++.+|+++|++++++ ++++|++++++||||.+
T Consensus 77 ~~~~~-~~~~gd~vlv~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~ 153 (385)
T 2bkw_A 77 SNFIL-SKAPNKNVLVVSTGTFSDR--FADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVL 153 (385)
T ss_dssp HHHSC-TTCSCCEEEEECSSHHHHH--HHHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEE
T ss_pred HHHhc-cCCCCCeEEEEcCCcchHH--HHHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeE
Confidence 99821 0289999988855433322 23455677999999999 78888999999999987 89999999999999999
Q ss_pred cCHHHHHHHHHhc--CCEEEEecCCcCCcccccCCCCCccEEEecCcC-cCCCCcceEEEEcccccc-cCCC------cc
Q 017640 225 LPIEEIVHWSHDV--GAKVLVDACQSVPHMVVDVQGLDADFLVASSHK-MCGPTGIGFLFGKSDLLS-AMPP------FL 294 (368)
Q Consensus 225 ~~l~~i~~l~~~~--g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K-~~g~~G~G~l~~~~~li~-~l~~------~~ 294 (368)
+|+++|.++|++| |+++|+|++|+.+..++++...++|++++|+|| ++|++|+|++++++++++ .+++ ..
T Consensus 154 ~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~ 233 (385)
T 2bkw_A 154 SDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHG 233 (385)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSC
T ss_pred cCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCc
Confidence 9999999999999 999999999998887777777789999999999 556889999999998877 6542 11
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH-HhhcCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI-QERHNT 366 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l-~~~~g~ 366 (368)
.++.... .......+.. ...+..++++..+++++..+++++.+.+++.+.++.+++++++.+.| .++ |+
T Consensus 234 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~ 303 (385)
T 2bkw_A 234 YFSSLRR-WTPIMENYEA-GKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGL-QL 303 (385)
T ss_dssp STTCHHH-HHHHHHHHHT-TCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTT-CC
T ss_pred eeecHHH-HhhHHHhhhc-cCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhc-Cc
Confidence 1111000 0000000000 01222468999999999999999888789999999999999999999 765 53
No 32
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=1e-29 Score=237.99 Aligned_cols=271 Identities=14% Similarity=0.194 Sum_probs=207.4
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCC---cchhhHHHHHHHHHHHHHHHHHcCCCCCCc-EEEeCCHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRG---IHFLSAKATDEYELARKKVAAFINASDSGE-IVFTKNATEAI 142 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~la~~~~~~~~~~-v~~t~g~t~a~ 142 (368)
+.+|+++.+..++|+.+++++.+.+..+.. +..+ ....+....+..+++++.+++++|++++++ +++|+|+|+++
T Consensus 3 ~~~~l~~~~~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~ 81 (362)
T 2c0r_A 3 ERAYNFNAGPAALPLEVLERAQAEFVDYQH-TGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQF 81 (362)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSSTT-SSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHH
T ss_pred cceeeccCCCCCCCHHHHHHHHHHHhhhhh-cCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHH
Confidence 347999999999999999999988765422 1111 112234456778899999999999975325 57889999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--C--CCCCHHHHHHhcccCceEEEEcccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--D--ESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~--~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
..++.++ +++||+|++.++.|++.. +...++..| +++.++.++ + ..+|.++++ +++++++|++++++
T Consensus 82 ~~~~~~l----~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~~~ 152 (362)
T 2c0r_A 82 AMIPMNF----LKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTSNE 152 (362)
T ss_dssp HHHHHHH----CCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEESEE
T ss_pred HHHHHhc----CCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeCCc
Confidence 9999998 789999998877655532 335556679 999999862 2 235666654 67889999999999
Q ss_pred cccccc-cCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCC
Q 017640 219 NMLASI-LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGG 297 (368)
Q Consensus 219 n~tG~~-~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~ 297 (368)
||||.+ .|+++| ||+++++|++|+.+..++++.+ .|++++|+||++|++|+|++++++++++.+.+.....
T Consensus 153 n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~~--~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~ 224 (362)
T 2c0r_A 153 TIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLNQ--FGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTM 224 (362)
T ss_dssp TTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGGG--CSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGG
T ss_pred Cccceeccccccc------CCCEEEEEChhhccCCccchhH--CcEEEEeccccccCcCcEEEEEcHHHHhhccccCchH
Confidence 999996 567776 8999999999999988776655 4899999999999999999999999988776532100
Q ss_pred cceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 298 EMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.++... .......+|++...++++..+++.+.+. +++.++++..++++++.+.|.++.
T Consensus 225 -------~~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 225 -------LRYDTY--VKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp -------GCHHHH--HHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred -------HhHHHH--hhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000000 0012235699999999999999998886 689999999999999999998764
No 33
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=3.8e-30 Score=240.48 Aligned_cols=273 Identities=15% Similarity=0.162 Sum_probs=209.6
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchh---hHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCH-HHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFL---SAKATDEYELARKKVAAFINASDSGEIVFTKNA-TEAINL 144 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~-t~a~~~ 144 (368)
+|+++.+..++|+.+++++.+.+..+ .+++.+.+.. .+...+..+++++.+++++|.+++++|++|+|+ |+|+..
T Consensus 4 ~~~~~~g~~~~p~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~ 82 (360)
T 1w23_A 4 VFNFNAGPSALPKPALERAQKELLNF-NDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTM 82 (360)
T ss_dssp CEECCSSSCCCCHHHHHHHHHTSSSS-TTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred eEeecCCCcCCCHHHHHHHHHHhhhh-ccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHH
Confidence 45666666689999999999887654 3443333222 455677888999999999999744589999999 999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHH-hcccCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKE-MLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~-~l~~~~~~v~~~~~~n~tG 222 (368)
++.++.. ..++||.|+++.++|++ ...++..| +++.+++++ ++.+|+++|++ ++++++++|++++++||||
T Consensus 83 ~~~~l~~-~~~~g~~vi~~~~~~~~-----~~~~~~~g-~~~~v~~~~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG 155 (360)
T 1w23_A 83 LPMNLLT-KGTIGNYVLTGSWSEKA-----LKEAKLLG-ETHIAASTKANSYQSIPDFSEFQLNENDAYLHITSNNTIYG 155 (360)
T ss_dssp HHHHHCC-TTCEEEEEECSHHHHHH-----HHHHHTTS-EEEEEEECGGGTSCSCCCGGGCCCCTTEEEEEEESEETTTT
T ss_pred HHHHhcC-CCCcccEEEecchhHHH-----HHHHHHhC-CeEEeecccccCcCCccchHhhccCCCCCEEEEeCCCCCcc
Confidence 9988821 01346677777665544 22346679 999999875 56689999999 8988999999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceee
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISD 302 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~ 302 (368)
.++| +| +++||+++|+|++|+.+..++++..+ |++++|+||.+|++|+|++++++++++.+++.. ++.. ..
T Consensus 156 ~~~~--~i---~~~~~~~li~D~a~~~~~~~~~~~~~--di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~-~~~~-~~ 226 (360)
T 1w23_A 156 TQYQ--NF---PEINHAPLIADMSSDILSRPLKVNQF--GMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQV-PTML-QY 226 (360)
T ss_dssp EECS--SC---CCCCSSCEEEECTTTTTSSCCCGGGC--SEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTC-CGGG-CH
T ss_pred eecc--cc---cccCCceEEEechhhcCCCCcCcccC--CEEEEEcccccCCCCcEEEEEcHHHHhhcccCC-cchh-hh
Confidence 9988 33 34899999999999988877666543 899999999999889999999999988877654 2111 00
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
... ...++..++++...++++..+++++.+. +++.+.++.+++++++.+.|.++++
T Consensus 227 ~~~-------~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 283 (360)
T 1w23_A 227 ATH-------IKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNG 283 (360)
T ss_dssp HHH-------HHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred hhh-------hhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccC
Confidence 000 0023456799999999999999988876 6889999999999999999988754
No 34
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.97 E-value=9.3e-29 Score=233.52 Aligned_cols=270 Identities=17% Similarity=0.089 Sum_probs=209.8
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
.|+++.. +++++.+.+++.+.+.....++. ......+..+++++.+++++|.+++ +|++|+|+++|+..++.+
T Consensus 33 ~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~la~~~~~~~~-~i~~~~ggt~a~~~~~~~ 105 (397)
T 3f9t_A 33 NIFGSMC-SNVLPITRKIVDIFLETNLGDPG-----LFKGTKLLEEKAVALLGSLLNNKDA-YGHIVSGGTEANLMALRC 105 (397)
T ss_dssp CBCSCSC-CCCCTHHHHHHHHHTTCCTTSGG-----GBHHHHHHHHHHHHHHHHHTTCTTC-EEEEESCHHHHHHHHHHH
T ss_pred CeEEEec-CCCcHHHHHHHHHHHhhcCCCcc-----cChhHHHHHHHHHHHHHHHhCCCCC-CEEEecCcHHHHHHHHHH
Confidence 4677764 45567888888887754322221 1124577788999999999999865 999999999999999998
Q ss_pred ccCC---------CCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccc
Q 017640 149 WGLS---------NLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHIS 218 (368)
Q Consensus 149 ~~~~---------~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~ 218 (368)
+... ...+||+|++.+++|++... .++..|++++.++.++++.+|+++|++++++ ++++|++++++
T Consensus 106 ~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 181 (397)
T 3f9t_A 106 IKNIWREKRRKGLSKNEHPKIIVPITAHFSFEK----GREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGT 181 (397)
T ss_dssp HHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHH----HHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSC
T ss_pred HHHHHHhhhhhcccCCCCeEEEECCcchhHHHH----HHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCC
Confidence 7211 11249999999999999544 4455699999999998999999999999998 89999999999
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCCcCCcc--------------cccCCCCCccEEEecCcCcC-CCCcceEEEEc
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM--------------VVDVQGLDADFLVASSHKMC-GPTGIGFLFGK 283 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~--------------~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~ 283 (368)
||||.+.|+++|.++|++||+++|+|++|+.+.. ++++.. +.|++++|+||++ ++.++|+++++
T Consensus 182 nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~ 260 (397)
T 3f9t_A 182 TELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFK 260 (397)
T ss_dssp TTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEES
T ss_pred CCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEccccccCCCCCceEEEEe
Confidence 9999999999999999999999999999985433 334444 7899999999976 45568999887
Q ss_pred cc-ccccCC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 017640 284 SD-LLSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 284 ~~-li~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 359 (368)
++ +++.++ ++..++. .....|+++.....++.++++.+...+.+.+.++..++.+++.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~ 324 (397)
T 3f9t_A 261 DIGYKRYLDVDAPYLTETR----------------QATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKK 324 (397)
T ss_dssp SGGGGGGTCEECTTSSSSE----------------ECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHhhccCCccccCCC----------------ccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 65 444442 3322211 112235666667888888888888778889999999999999999
Q ss_pred HHhhcCCC
Q 017640 360 IQERHNTT 367 (368)
Q Consensus 360 l~~~~g~t 367 (368)
|.++ |++
T Consensus 325 L~~~-g~~ 331 (397)
T 3f9t_A 325 LKEN-NFK 331 (397)
T ss_dssp HHHT-TCC
T ss_pred HHHC-CCE
Confidence 9987 654
No 35
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.97 E-value=8.2e-29 Score=231.00 Aligned_cols=256 Identities=12% Similarity=0.130 Sum_probs=207.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
++++++|+.+... ++++.+.+++.+.+.....++ .....++|+++++++|.+++ +|++|+|+++++.
T Consensus 15 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-----------~~~~~~l~~~la~~~~~~~~-~i~~~~g~~~a~~ 82 (354)
T 3ly1_A 15 TDNPIRINFNENPLGMSPKAQAAARDAVVKANRYA-----------KNEILMLGNKLAAHHQVEAP-SILLTAGSSEGIR 82 (354)
T ss_dssp SSSCEECSSCCCSSCCCHHHHHHHHHTGGGTTSCC-----------HHHHHHHHHHHHHHTTSCGG-GEEEESHHHHHHH
T ss_pred CCceEEccCCCCCCCCCHHHHHHHHHHHhhCcCCC-----------CCchHHHHHHHHHHhCCChH-HEEEeCChHHHHH
Confidence 3678999998876 688999999988776432221 23456899999999998764 9999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc--cCceEEEEccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS--RKTKLVVIHHISNML 221 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~n~t 221 (368)
.++.++ +++||+|++.+|+|++. ...++..|++++.++.++++.+|+++|+++++ +++++|++++++|||
T Consensus 83 ~~~~~l----~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l~~p~npt 154 (354)
T 3ly1_A 83 AAIEAY----ASLEAQLVIPELTYGDG----EHFAKIAGMKVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYLVNPNNPT 154 (354)
T ss_dssp HHHHHH----CCTTCEEEEESSSCTHH----HHHHHHTTCEEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEEESSCTTT
T ss_pred HHHHHH----hCCCCeEEECCCCchHH----HHHHHHcCCEEEEecCCCCCCCCHHHHHHHhccCCCCCEEEEeCCCCCc
Confidence 999998 78999999999999884 44456679999999998889999999999998 789999999999999
Q ss_pred ccccCHHHHHHHHHh--cCCEEEEecCCcCCccc------cc-CCCC-CccEEEecCcCcCCCCc--ceEEEEccccccc
Q 017640 222 ASILPIEEIVHWSHD--VGAKVLVDACQSVPHMV------VD-VQGL-DADFLVASSHKMCGPTG--IGFLFGKSDLLSA 289 (368)
Q Consensus 222 G~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~~------~~-~~~~-~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~ 289 (368)
|.++|.+++.++++. ||+++|+|++|+..... +. .... +.+++++|+||.+|++| +|++++++++++.
T Consensus 155 G~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 234 (354)
T 3ly1_A 155 GTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIAL 234 (354)
T ss_dssp CCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHH
T ss_pred CCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHH
Confidence 999998888888877 99999999999833221 11 1223 57799999999998777 8999999988877
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+..... .++++.....++..+++.. ..++.++++..++.+++.+.|.+. |+
T Consensus 235 ~~~~~~-----------------------~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~-~~ 285 (354)
T 3ly1_A 235 MGRYVA-----------------------GEKINFSGVDAALASMNDS--AFITYSKKSNDVSRQILLKALEDL-KL 285 (354)
T ss_dssp HGGGTT-----------------------CSCCCHHHHHHHHHHTTCH--HHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred HHHhcC-----------------------CCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 664432 1377888888888887744 236788889999999999999876 54
No 36
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=6.6e-29 Score=232.50 Aligned_cols=256 Identities=15% Similarity=0.125 Sum_probs=204.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+++++|+.+.+. ++++.+.+++.+.+.....++ .....++|+++++++|.+++ +|++|+|+++++..
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-----------~~~~~~lr~~la~~~~~~~~-~v~~~~g~t~a~~~ 99 (363)
T 3ffh_A 32 TKITKLSSNENPLGTSKKVAAIQANSSVETEIYP-----------DGWASSLRKEVADFYQLEEE-ELIFTAGVDELIEL 99 (363)
T ss_dssp SCCEECSSCSCTTCCCHHHHHHHHTCBSCCCBC---------------CHHHHHHHHHHHTCCGG-GEEEESSHHHHHHH
T ss_pred CceEEccCCCCCCCCCHHHHHHHHHHHHHhhcCC-----------CcchHHHHHHHHHHhCCChh-hEEEeCCHHHHHHH
Confidence 568999998776 578899999887654322222 22345899999999998764 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +++||+|++.+|+|++. ...++..|++++.++.++++.+|++++++++++++++|++++++||||.+
T Consensus 100 ~~~~~----~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~ 171 (363)
T 3ffh_A 100 LTRVL----LDTTTNTVMATPTFVQY----RQNALIEGAEVREIPLLQDGEHDLEGMLNAIDEKTTIVWICNPNNPTGNY 171 (363)
T ss_dssp HHHHH----CSTTCEEEEEESSCHHH----HHHHHHHTCEEEEEECCTTSCCCHHHHHHHCCTTEEEEEEESSCTTTCCC
T ss_pred HHHHH----ccCCCEEEEcCCChHHH----HHHHHHcCCEEEEecCCCCCCcCHHHHHHhcccCCCEEEEeCCCCCcCCC
Confidence 99998 88999999999988874 44556679999999998889999999999999999999999999999999
Q ss_pred cCHHHHHHHHHhc--CCEEEEecCCcCCcc-----ccc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcc
Q 017640 225 LPIEEIVHWSHDV--GAKVLVDACQSVPHM-----VVD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 225 ~~l~~i~~l~~~~--g~~li~D~a~~~~~~-----~~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~ 294 (368)
+|+++|.++++.+ |+++|+|++|+.... ... ....+.++++.|++|.+|++| +|++++++++++.+++..
T Consensus 172 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~ 251 (363)
T 3ffh_A 172 IELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVR 251 (363)
T ss_dssp CCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTC
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHhC
Confidence 9999999999887 999999999982211 111 122356688999999999888 599999998887765432
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
. .++.+.....++..+++.. ..++.++++..++.+++.+.|.+++|+
T Consensus 252 ~-----------------------~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~~g~ 298 (363)
T 3ffh_A 252 P-----------------------PFNTTSIGQKLAIEAIKDQ--AFIGECRTSNANGIKQYEAFAKRFEKV 298 (363)
T ss_dssp C-----------------------SCCCBHHHHHHHHHHHHCH--HHHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred C-----------------------CCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 1 2367778888888887633 246788899999999999999886664
No 37
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.97 E-value=1.8e-28 Score=231.63 Aligned_cols=261 Identities=16% Similarity=0.138 Sum_probs=196.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t 139 (368)
++.++|+.+.+. +.++.+.+++.+.+.... . .+... ....++|+.+++++ |.+ ++++|++|+|++
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~----~y~~~----~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~ 101 (385)
T 1b5p_A 31 VDLVALTAGEPDFDTPEHVKEAARRALAQGK-T----KYAPP----AGIPELREALAEKFRRENGLSVTPEETIVTVGGS 101 (385)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-C----SCCCT----TCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhcCC-C----CCCCC----CCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChH
Confidence 567899888776 567889999888775411 1 11111 11225666666665 432 234999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++.+++.++ +++||+|++++|+|++ +...++..|++++.++.++ ++.+|+++|++++++++++|+++++
T Consensus 102 ~al~~~~~~l----~~~gd~Vlv~~p~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 173 (385)
T 1b5p_A 102 QALFNLFQAI----LDPGDEVIVLSPYWVS----YPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSP 173 (385)
T ss_dssp HHHHHHHHHH----CCTTCEEEEEESCCTH----HHHHHHHTTCEEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHHHHh----cCCCCEEEEcCCCchh----HHHHHHHcCCEEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCC
Confidence 9999999998 8899999999999887 4455567799999999974 4678999999999888999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----c-ccCCCCCccEEEecCcCcCCCCc--ceEEEEcccc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----V-VDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~-~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
+||||.++| +++|.++|++||+++|+|++|+.... + .++.. +.+++++|+||.+|++| +|++++++++
T Consensus 174 ~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~~~~G~RiG~~~~~~~~ 252 (385)
T 1b5p_A 174 NNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAP-EHTLTVNGAAKAFAMTGWRIGYACGPKEV 252 (385)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCT-TTEEEEEESTTTTTCGGGCCEEEECCHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCC-CCEEEEEechhhcCCcccceEEEEeCHHH
Confidence 999999998 88999999999999999999985322 1 12222 67899999999999888 9999999988
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH---HHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY---LSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~---~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++.+.+....+ ..+.+.....++..+++. ..+ .++.++++..+..+++.+.|.++
T Consensus 253 ~~~l~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 253 IKAMASVSRQS---------------------TTSPDTIAQWATLEALTNQEASRA-FVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp HHHHHHHHHTT---------------------TCSCCHHHHHHHHHHHHCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhc---------------------cCCCCHHHHHHHHHHHhCCCcchH-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 77765433211 114556666666666653 222 26778888888999999999876
Q ss_pred cCCC
Q 017640 364 HNTT 367 (368)
Q Consensus 364 ~g~t 367 (368)
|++
T Consensus 311 -g~~ 313 (385)
T 1b5p_A 311 -GLK 313 (385)
T ss_dssp -TCC
T ss_pred -CCe
Confidence 643
No 38
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.96 E-value=1.7e-28 Score=231.83 Aligned_cols=262 Identities=16% Similarity=0.145 Sum_probs=200.5
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCc-EEEeCCHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGE-IVFTKNAT 139 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~-v~~t~g~t 139 (368)
++++|+.+... +.++.+.+++.+.+.... . .+.. .....++|+.+++++ |.+ ++++ |++|+|++
T Consensus 27 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~----~y~~----~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~ 97 (389)
T 1gd9_A 27 DVISLGIGEPDFDTPQHIKEYAKEALDKGL-T----HYGP----NIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGAN 97 (389)
T ss_dssp SCEECCCCSCSSCCCHHHHHHHHHHHHTTC-C----SCCC----TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTT
T ss_pred CeEecCCCCCCCCCCHHHHHHHHHHHhCCC-C----CCCC----CCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChH
Confidence 56899888776 568899999988876421 1 1111 111235666666666 853 2247 99999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++..++.++ +++||+|++.+|+|++... .++..|++++.++.++ ++.+|+++|++++++++++|+++++
T Consensus 98 ~a~~~~~~~~----~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 169 (389)
T 1gd9_A 98 QAFLMGLSAF----LKDGEEVLIPTPAFVSYAP----AVILAGGKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSP 169 (389)
T ss_dssp HHHHHHHTTT----CCTTCEEEEEESCCTTHHH----HHHHHTCEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHHHHHh----CCCCCEEEEcCCCchhHHH----HHHHCCCEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECC
Confidence 9999999987 7899999999999999543 3455699999999875 4678999999999888999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cc---cCCC-CCccEEEecCcCcCCCCc--ceEEEEcc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VV---DVQG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~---~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~ 284 (368)
+||||.++| +++|.++|++||+++|+|++|+.+.. .. ++.. .+.|++++|+||.+|++| +|++++++
T Consensus 170 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 249 (389)
T 1gd9_A 170 CNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS 249 (389)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH
Confidence 999999997 88999999999999999999986543 11 2221 357899999999999888 79999999
Q ss_pred cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 285 ~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++++.+.+...++ .++.+.....++..+++..... .++.++++..++.+++.+.|.+.
T Consensus 250 ~~~~~l~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 250 WIIERMVKFQMYN---------------------ATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp HHHHHHHHHHTTT---------------------TCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhh---------------------ccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8887766443221 1256777777777777654331 46788888999999999999886
Q ss_pred cCCC
Q 017640 364 HNTT 367 (368)
Q Consensus 364 ~g~t 367 (368)
|++
T Consensus 309 -g~~ 311 (389)
T 1gd9_A 309 -GLP 311 (389)
T ss_dssp -TCC
T ss_pred -CCe
Confidence 544
No 39
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.96 E-value=1.2e-28 Score=231.19 Aligned_cols=256 Identities=16% Similarity=0.153 Sum_probs=206.1
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+++++|+.+... ++++.+.+++.+.+.. ...++. ....++|+++++++|.+++++|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----------~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~ 98 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNRYPV-----------PSSEALRAKLKEVMQVPAGMEVLLGNGSDEII 98 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTCSCC-----------CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHH
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-----------CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHH
Confidence 678999998876 6789999999988874 222221 12348999999999994335999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEccccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNML 221 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t 221 (368)
..++.++ +++||+|++.+++|++.... ++..|++++.++.++++.+|+++|++++++ ++++|++++++|||
T Consensus 99 ~~~~~~~----~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 170 (367)
T 3euc_A 99 SMLALAA----ARPGAKVMAPVPGFVMYAMS----AQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLAYPNNPT 170 (367)
T ss_dssp HHHHHHT----CCTTCEEEEEESCSCCSCHH----HHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEESSCTTT
T ss_pred HHHHHHH----cCCCCEEEEcCCCHHHHHHH----HHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEcCCCCCC
Confidence 9999988 88999999999999986543 456699999999998889999999999988 89999999999999
Q ss_pred ccccC---HHHHHHHHHhc--CCEEEEecCCcCCcc---cccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCC
Q 017640 222 ASILP---IEEIVHWSHDV--GAKVLVDACQSVPHM---VVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMP 291 (368)
Q Consensus 222 G~~~~---l~~i~~l~~~~--g~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~ 291 (368)
|.++| +++|.++|++| |+++|+|++|+.... .......+.++++.|+||. +++| +|++++++++++.+.
T Consensus 171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~ 249 (367)
T 3euc_A 171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLD 249 (367)
T ss_dssp CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHG
T ss_pred CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHH
Confidence 99987 67788889999 999999999883211 1123344677999999998 7666 899999998887765
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.... ..+.+.....++..+++. ...++..+++..++.+++.+.|.+++|+
T Consensus 250 ~~~~-----------------------~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~ 299 (367)
T 3euc_A 250 KVRP-----------------------PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGV 299 (367)
T ss_dssp GGCC-----------------------SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HhCC-----------------------CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 4331 125777888888888876 2236788899999999999999887665
No 40
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.96 E-value=8.3e-29 Score=237.20 Aligned_cols=277 Identities=13% Similarity=0.129 Sum_probs=204.1
Q ss_pred hcCCCCcccccccCCCCeEEeccCCCC-----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC
Q 017640 51 TRPDFPILHQEVYGSKKLVYLDNAATS-----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN 125 (368)
Q Consensus 51 ~r~~f~~~~~~~~~~~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~ 125 (368)
+|..+..+.....+++++|+|+.+... ++++.+.+++.+.+.....+.+. ......++|++++++++
T Consensus 39 i~~~~~~~~~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~lr~~la~~~~ 110 (427)
T 3dyd_A 39 IRAIVDNMKVKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYA--------PSIGFLSSREEIASYYH 110 (427)
T ss_dssp --------CCCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCC--------CTTCCHHHHHHHHHHHC
T ss_pred HHHHHHHHhhcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCC--------CCCCcHHHHHHHHHHHh
Confidence 566655443333324678999998854 68999999999988763211110 01223489999999998
Q ss_pred -----CCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCH
Q 017640 126 -----ASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDL 198 (368)
Q Consensus 126 -----~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~ 198 (368)
.++ ++|++|+|+++|+.+++.++ .++||+|++.+|+|++. ...++..|++++.++.++ ++.+|+
T Consensus 111 ~~~~~~~~-~~v~~t~g~t~al~~~~~~l----~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~ 181 (427)
T 3dyd_A 111 CPEAPLEA-KDVILTSGCSQAIDLCLAVL----ANPGQNILVPRPGFSLY----KTLAESMGIEVKLYNLLPEKSWEIDL 181 (427)
T ss_dssp BTTBCCCG-GGEEEESSHHHHHHHHHHHH----CCTTCEEEEEESCCTHH----HHHHHHTTCEEEEEEEEGGGTTEECH
T ss_pred hcCCCCCh-HHEEEecCcHHHHHHHHHHh----cCCCCEEEEcCCCchhH----HHHHHHcCCEEEEEecccccCCCCCH
Confidence 444 49999999999999999998 78999999999988874 455667799999999863 467899
Q ss_pred HHHHHhcccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccccCCCCC---ccEEEecC
Q 017640 199 DKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDVQGLD---ADFLVASS 268 (368)
Q Consensus 199 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~ 268 (368)
++|++++++++++|++++++||||.++| +++|+++|++||+++|+|++|+... ....+...+ ..++++|+
T Consensus 182 ~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~ 261 (427)
T 3dyd_A 182 KQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGL 261 (427)
T ss_dssp HHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEES
T ss_pred HHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeec
Confidence 9999999989999999999999999999 9999999999999999999998422 111222222 34778899
Q ss_pred cCcCCCCc--ceEEEEcc-------cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 269 HKMCGPTG--IGFLFGKS-------DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 269 ~K~~g~~G--~G~l~~~~-------~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
||.||++| +|++++++ ++++.+..... ...+++.....++..+++....
T Consensus 262 sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~----------------------~~~~~~~~~~~a~~~~L~~~~~ 319 (427)
T 3dyd_A 262 AKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQ----------------------RILGPCTIVQGALKSILCRTPG 319 (427)
T ss_dssp TTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHH----------------------HHCCSCHHHHHHHHHHHHHSCH
T ss_pred cccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHh----------------------ccCCCCHHHHHHHHHHHHhcCH
Confidence 99998888 89999885 33333322110 0126778888888887775333
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..++.+.++..++++++.+.|++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~l~~~L~~~~g~ 346 (427)
T 3dyd_A 320 EFYHNTLSFLKSNADLCYGALAAIPGL 346 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 446788888999999999999887664
No 41
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.96 E-value=6.1e-29 Score=234.35 Aligned_cols=260 Identities=16% Similarity=0.165 Sum_probs=205.7
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
++++|+.+.+. +.++.+.+++.+.+... +.+ .. .....++|+.++++++.+++ +|++|+|+++++..+
T Consensus 26 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~--~~y----~~----~~~~~~l~~~la~~~~~~~~-~v~~~~g~~~a~~~~ 94 (381)
T 1v2d_A 26 GAVNLGQGFPSNPPPPFLLEAVRRALGRQ--DQY----AP----PAGLPALREALAEEFAVEPE-SVVVTSGATEALYVL 94 (381)
T ss_dssp TCEECCCCSCSSCCCHHHHHHHHHHTTTS--CSC----CC----TTCCHHHHHHHHHHHTSCGG-GEEEESSHHHHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHh--cCC----CC----CCCCHHHHHHHHHhcCCChh-hEEEcCChHHHHHHH
Confidence 56788887766 57889999998887541 111 10 11234899999999998765 899999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC---CCCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN---DDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~---~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
+.++ +++||+|++.+++|++.. ..++..|++++.++.+ +++.+|+++|++++++++++|++++++||||
T Consensus 95 ~~~~----~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG 166 (381)
T 1v2d_A 95 LQSL----VGPGDEVVVLEPFFDVYL----PDAFLAGAKARLVRLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTG 166 (381)
T ss_dssp HHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTC
T ss_pred HHHh----CCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEeCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCC
Confidence 9998 789999999999999854 3456679999999986 5578899999999988999999999999999
Q ss_pred cccC---HHHHHHHHHhcCCEEEEecCCcCCc---ccccCC--CCCccEEEecCcCcCCCCc--ceEEEEcccccccCCC
Q 017640 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPH---MVVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 223 ~~~~---l~~i~~l~~~~g~~li~D~a~~~~~---~~~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~ 292 (368)
.++| +++|.++|++||+++|+|++|+... ...++. ..+.|++++|+||.+|++| +|++++++++++.+..
T Consensus 167 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 246 (381)
T 1v2d_A 167 LVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAG 246 (381)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHH
Confidence 9998 8899999999999999999998532 112222 3478999999999999888 9999999988876653
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-TIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
... +...+.+.....++..+++... ...++.++++..++.+++.+.|.+. |++
T Consensus 247 ~~~---------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 300 (381)
T 1v2d_A 247 MRQ---------------------WTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLR 300 (381)
T ss_dssp HHH---------------------HHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHh---------------------hcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 221 1123667777778888887653 3347888999999999999999874 543
No 42
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=9.8e-29 Score=231.52 Aligned_cols=254 Identities=15% Similarity=0.135 Sum_probs=203.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+++++|+.+.+. ++++.+.+++.+.+.....++... . .++|+++++++|.+++ +|++|+|+++++..
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~----------~-~~lr~~la~~~~~~~~-~v~~~~g~~~a~~~ 97 (365)
T 3get_A 30 KEVIKLASNENPFGTPPKAIECLRQNANKAHLYPDDS----------M-IELKSTLAQKYKVQNE-NIIIGAGSDQVIEF 97 (365)
T ss_dssp SCCEECSSCCCTTCSCHHHHHHHHHHGGGTTSCCCTT----------C-HHHHHHHHHHHTCCGG-GEEEESSHHHHHHH
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHhhccCCCCC----------h-HHHHHHHHHHhCCCcc-eEEECCCHHHHHHH
Confidence 467999988766 678999999998876544443211 1 2799999999998654 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CCCCCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-NDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
++.++ +++||+|++.+|+|++.. ..++..|++++.+++ ++++ +|+++|++++++++++|++++++||||.
T Consensus 98 ~~~~l----~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~ 168 (365)
T 3get_A 98 AIHSK----LNSKNAFLQAGVTFAMYE----IYAKQCGAKCYKTQSITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGE 168 (365)
T ss_dssp HHHHH----CCTTCEEEECSSCCTHHH----HHHHHHTCEEEECSSSSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCC
T ss_pred HHHHH----hCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEecCCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCC
Confidence 99998 899999999999998744 445566999999998 5678 9999999999999999999999999999
Q ss_pred ccCHHHHHHHHH--hcCCEEEEecCCc------CCcccccC----CCCCccEEEecCcCcCCCCc--ceEEEEccccccc
Q 017640 224 ILPIEEIVHWSH--DVGAKVLVDACQS------VPHMVVDV----QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSA 289 (368)
Q Consensus 224 ~~~l~~i~~l~~--~~g~~li~D~a~~------~~~~~~~~----~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~ 289 (368)
++|++++.++++ ++|+++|+|++|+ .+..+.+. ...+.+++++|+||.+|++| +|++++++++++.
T Consensus 169 ~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 248 (365)
T 3get_A 169 CLDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISA 248 (365)
T ss_dssp CCCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHH
T ss_pred CcCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHH
Confidence 999888888888 7799999999998 32221211 22357799999999998777 8999999888876
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+..... ..+++.....++..+++.. ..++.++++..++.+++.+.|.++ |+
T Consensus 249 ~~~~~~-----------------------~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~~-g~ 299 (365)
T 3get_A 249 FYKLRA-----------------------PFNVSNLALKAAVAAMDDD--EFTEKTLENNFSQMELYKEFAKKH-NI 299 (365)
T ss_dssp HHHHSC-----------------------TTCSCHHHHHHHHHHHTCH--HHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHhcC-----------------------CCCcCHHHHHHHHHHhCCH--HHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 653321 1257778888888887743 347788889999999999999876 54
No 43
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.96 E-value=2e-28 Score=229.86 Aligned_cols=253 Identities=15% Similarity=0.158 Sum_probs=196.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHh-hccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEeCC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAY-NSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g 137 (368)
+++++|+.+.++ ..++.+.+++.+.+... ..++. .....++|+.++++++ .++ ++|++|+|
T Consensus 29 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~----------~~~~~~l~~~la~~~~~~~g~~~~~-~~v~~~~g 97 (370)
T 2z61_A 29 KKVIHLEIGEPDFNTPKPIVDEGIKSLKEGKTHYTD----------SRGILELREKISELYKDKYKADIIP-DNIIITGG 97 (370)
T ss_dssp CCCEECCCCSCSSCCCHHHHHHHHHHHHTTCCSCCC----------TTCCHHHHHHHHHHHHHHSSCCCCG-GGEEEESS
T ss_pred CCEEEccCCCCCCCCCHHHHHHHHHHHHcCccCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCh-hhEEECCC
Confidence 578999998876 35889999998887642 11111 1112357777777764 333 48999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++++..++.++ +++||+|++.+|+|++... .++..|++++.++ +|+++|++++++++++|+++++
T Consensus 98 ~~~a~~~~~~~~----~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~v~------~d~~~l~~~l~~~~~~v~~~~p 163 (370)
T 2z61_A 98 SSLGLFFALSSI----IDDGDEVLIQNPCYPCYKN----FIRFLGAKPVFCD------FTVESLEEALSDKTKAIIINSP 163 (370)
T ss_dssp HHHHHHHHHHHH----CCTTCEEEEESSCCTHHHH----HHHHTTCEEEEEC------SSHHHHHHHCCSSEEEEEEESS
T ss_pred hHHHHHHHHHHh----cCCCCEEEEeCCCchhHHH----HHHHcCCEEEEeC------CCHHHHHHhcccCceEEEEcCC
Confidence 999999999998 7899999999999998543 3556799999988 5899999999888999999999
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc---cccCC----CCCccEEEecCcCcCCCCc--ceEEEEcccccc
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQ----GLDADFLVASSHKMCGPTG--IGFLFGKSDLLS 288 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~----~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~ 288 (368)
+||||.++|.+ |.++|++||+++|+|++|+.+.. +.++. ..+.|++++|+||.+|++| +|++++++++++
T Consensus 164 ~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 242 (370)
T 2z61_A 164 SNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDEIIE 242 (370)
T ss_dssp CTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHH
T ss_pred CCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHHHHH
Confidence 99999999999 99999999999999999986433 12221 2367899999999999888 999999998887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+++...++ .++.+.....++..+++.+....++.++++..++.+++.+.|.+. |+
T Consensus 243 ~~~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 298 (370)
T 2z61_A 243 AILKLQQNL---------------------FISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GW 298 (370)
T ss_dssp HHHHHHHHH---------------------TSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHhhc---------------------ccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 766443211 126677777777777765223346788888999999999999876 54
No 44
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.96 E-value=1.9e-28 Score=231.82 Aligned_cols=260 Identities=16% Similarity=0.155 Sum_probs=197.1
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNA 138 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~ 138 (368)
++++++|+.+.+. +.++.+.+++.+.+.... . .+.. .....++|+.+++++ |.+ ++++|++|+|+
T Consensus 40 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~----~y~~----~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~ 110 (389)
T 1o4s_A 40 GEDVINLTAGEPDFPTPEPVVEEAVRFLQKGE-V----KYTD----PRGIYELREGIAKRIGERYKKDISPDQVVVTNGA 110 (389)
T ss_dssp TCCCEECCCSSCSSCCCHHHHHHHHHHHTTCC-C----CCCC----TTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHH
T ss_pred CCCEEEccCCCCCCCCCHHHHHHHHHHHhcCC-C----CCCC----CCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCH
Confidence 3678899988776 567889999888775421 1 1111 111235666677666 763 33599999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++ ++.+|+++|++++++++++|++++
T Consensus 111 t~al~~~~~~l----~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 182 (389)
T 1o4s_A 111 KQALFNAFMAL----LDPGDEVIVFSPVWVSYI----PQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINS 182 (389)
T ss_dssp HHHHHHHHHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEES
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCchhHH----HHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccCceEEEEcC
Confidence 99999999998 789999999999999854 34456799999999875 467899999999988999999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc---c---cCCC-CCccEEEecCcCcCCCCc--ceEEEEcc
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV---V---DVQG-LDADFLVASSHKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~---~---~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~ 284 (368)
++||||.++| +++|.++|++||+++|+|++|+.+... . .+.. .+.|++++|+||.+|++| +|++++++
T Consensus 183 p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~ 262 (389)
T 1o4s_A 183 PNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSE 262 (389)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCCcccceEEEEeCH
Confidence 9999999998 899999999999999999999865431 1 2222 468999999999999888 89999999
Q ss_pred cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 285 ~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
++++.+.+...++. .+.+.....++..++ +. +++.++++..++.+++.+.|.+.
T Consensus 263 ~~~~~l~~~~~~~~---------------------~~~~~~~~~a~~~~l---~~-~~~~~~~~~~~~~~~l~~~L~~~- 316 (389)
T 1o4s_A 263 KVATAVSKIQSHTT---------------------SCINTVAQYAALKAL---EV-DNSYMVQTFKERKNFVVERLKKM- 316 (389)
T ss_dssp HHHHHHHHHHHHHT---------------------CSCCHHHHHHHHHHT---TC-CCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhhhcc---------------------cCCCHHHHHHHHHHH---hc-cHHHHHHHHHHHHHHHHHHHHhc-
Confidence 88877664432111 133444444444443 33 47888999999999999999886
Q ss_pred CCC
Q 017640 365 NTT 367 (368)
Q Consensus 365 g~t 367 (368)
|++
T Consensus 317 g~~ 319 (389)
T 1o4s_A 317 GVK 319 (389)
T ss_dssp TCC
T ss_pred CCe
Confidence 543
No 45
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.96 E-value=5.4e-28 Score=228.33 Aligned_cols=267 Identities=16% Similarity=0.123 Sum_probs=195.7
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~ 143 (368)
+++++|+.+... +.++.+.+++.+.+.... . .+....+..+..+.+.+.+.+.+|.+ .+++|++|+|+++|+.
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-~----~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~ 104 (388)
T 1j32_A 30 IDVCSFSAGEPDFNTPKHIVEAAKAALEQGK-T----RYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIF 104 (388)
T ss_dssp CCCEECCCSSCSSCCCHHHHHHHHHHHHTTC-C----SCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHhcCC-C----CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHH
Confidence 567899888766 568889999988875421 0 11111112333334444444444643 2348999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHISNML 221 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~t 221 (368)
.++.++ +++||+|++.+|+|++.. ..++..|++++.++.++ ++.+|+++|++++++++++|++++++|||
T Consensus 105 ~~~~~~----~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~npt 176 (388)
T 1j32_A 105 NLMLAM----IEPGDEVIIPAPFWVSYP----EMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPT 176 (388)
T ss_dssp HHHHHH----CCTTCEEEEESSCCTHHH----HHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTT
T ss_pred HHHHHh----cCCCCEEEEcCCCChhHH----HHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCC
Confidence 999998 789999999999998844 44566799999999875 57789999999999899999999999999
Q ss_pred ccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------c-ccCCC--CCccEEEecCcCcCCCCc--ceEEEEccccc
Q 017640 222 ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------V-VDVQG--LDADFLVASSHKMCGPTG--IGFLFGKSDLL 287 (368)
Q Consensus 222 G~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~-~~~~~--~~~d~~~~s~~K~~g~~G--~G~l~~~~~li 287 (368)
|.++| +++|.++|++||+++|+|++|+.... + ..+.. .+.|+++.|+||.+|++| +|+++++++++
T Consensus 177 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~ 256 (388)
T 1j32_A 177 GMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLV 256 (388)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHH
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHHHH
Confidence 99987 88999999999999999999985322 1 11211 357899999999999888 99999999887
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+.+.+...++. .+.+.....++..+++... ..++.++++..++.+++.+.|++.+|++
T Consensus 257 ~~l~~~~~~~~---------------------~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 314 (388)
T 1j32_A 257 KAATKIQGHST---------------------SNVCTFAQYGAIAAYENSQ-DCVQEMLAAFAERRRYMLDALNAMPGLE 314 (388)
T ss_dssp HHHHHHHHTTT---------------------CSCCHHHHHHHHHHHHSCS-HHHHHHHHHHHHHHHHHHHHHHTCTTCB
T ss_pred HHHHHHHhhcc---------------------cCCCHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 77654432111 1344445555555554221 1356788889999999999998876654
No 46
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.96 E-value=3.5e-28 Score=229.63 Aligned_cols=263 Identities=11% Similarity=0.101 Sum_probs=203.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN--ASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~~~~~v~~t~g~t~a~ 142 (368)
+++++|..+..+ ++++.+.+++.+.+.... +.++....+..+++++.+++.+| .++ ++|++|+|+++++
T Consensus 32 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~-------~~y~~~~~~~~~~l~~~l~~~~g~~~~~-~~v~~~~g~~~a~ 103 (391)
T 4dq6_A 32 NDLLPMWVADMDFKAAPCIIDSLKNRLEQEI-------YGYTTRPDSYNESIVNWLYRRHNWKIKS-EWLIYSPGVIPAI 103 (391)
T ss_dssp SCSEECCSSSCSSCCCHHHHHHHHHHHTTCC-------CCCBCCCHHHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHHH
T ss_pred CCceeccccCCCCCCCHHHHHHHHHHHhCCC-------CCCCCCCHHHHHHHHHHHHHHhCCCCcH-HHeEEcCChHHHH
Confidence 567899988776 678999999988875411 11111236677789999999999 444 4999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CC--CCCCHHHHHHhcccCceEEEEcccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DD--ESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~--~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
..++.++ +++||+|++.+|+|++.. ..++..|++++.++.+ .+ +.+|+++|++++++ +++|++++++
T Consensus 104 ~~~~~~~----~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~ 174 (391)
T 4dq6_A 104 SLLINEL----TKANDKIMIQEPVYSPFN----SVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPH 174 (391)
T ss_dssp HHHHHHH----SCTTCEEEECSSCCTHHH----HHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSB
T ss_pred HHHHHHh----CCCCCEEEEcCCCCHHHH----HHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCC
Confidence 9999998 889999999999999854 3455679999999987 23 45899999999988 9999999999
Q ss_pred cccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccccCCCC-----CccEEEecCcCcCCCCc--ceEEEEcc
Q 017640 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDVQGL-----DADFLVASSHKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~~~~~~-----~~d~~~~s~~K~~g~~G--~G~l~~~~ 284 (368)
||||.++| +++|.++|++||+++|+|++|+... ...++... +.++++.|+||.+|++| +|++++++
T Consensus 175 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 254 (391)
T 4dq6_A 175 NPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD 254 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC
Confidence 99999977 7888999999999999999998532 11222222 34488999999888666 89999886
Q ss_pred -cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-
Q 017640 285 -DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE- 362 (368)
Q Consensus 285 -~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~- 362 (368)
++++.+...... +..++++.....++..+++...+ .++.++++.+++.+++.+.|.+
T Consensus 255 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 313 (391)
T 4dq6_A 255 EKDYKLLDDAFTR--------------------IDIKRNNCFSLVATEASYNNGES-WLESFLEYLESNIDFAIKYINEN 313 (391)
T ss_dssp HHHHHHHHHHHHH--------------------TTCCCCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh--------------------hcCCCCCHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 777666543211 12347788888888888775333 2678888999999999999987
Q ss_pred hcCC
Q 017640 363 RHNT 366 (368)
Q Consensus 363 ~~g~ 366 (368)
++|+
T Consensus 314 ~~~~ 317 (391)
T 4dq6_A 314 MPKL 317 (391)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 4564
No 47
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=1.4e-27 Score=221.12 Aligned_cols=251 Identities=17% Similarity=0.137 Sum_probs=195.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
++.|+|+.+.+. ++++.+.+++.+.......++ .....++|+++++++|++++ +|++|+|+++++..
T Consensus 16 ~~~i~l~~n~~~~~~~~~v~~a~~~~~~~~~~y~-----------~~~~~~lr~~la~~~~~~~~-~i~~t~G~~~~l~~ 83 (337)
T 3p1t_A 16 AQAVCLAFNENPEAVEPRVQAAIAAAAARINRYP-----------FDAEPRVMRKLAEHFSCPED-NLMLVRGIDECFDR 83 (337)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHGGGTTSCC-----------TTHHHHHHHHHHHHHTSCGG-GEEEESHHHHHHHH
T ss_pred CCceEeeCCCCCCCCCHHHHHHHHHhhhhhccCC-----------CCchHHHHHHHHHHhCcCHH-HEEEeCCHHHHHHH
Confidence 678999999766 688999999988765433222 13455899999999999764 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
++.++ +||+|++.+|+|++. ...++..|++++.++.++++.+|+++|+++ .+++++++++++||||.+
T Consensus 84 ~~~~~------~gd~vl~~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~ 151 (337)
T 3p1t_A 84 ISAEF------SSMRFVTAWPGFDGY----RARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQA 151 (337)
T ss_dssp HHHHS------TTSEEEEESSSCSHH----HHHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCC
T ss_pred HHHhc------CCCeEEEeCCCcHHH----HHHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCC
Confidence 99864 899999999999884 445567799999999988889999999886 468999999999999999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcC--CcccccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCCcce
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSV--PHMVVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMI 300 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~--~~~~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~ 300 (368)
+|++++.++|+++++ +++|++|+. +.........+.+++++|+||.+|++| +|++++++++++.+....
T Consensus 152 ~~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~------ 224 (337)
T 3p1t_A 152 LSAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKRKQ------ 224 (337)
T ss_dssp CCHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHTTS------
T ss_pred CCHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHhhc------
Confidence 999999999999997 566999872 211222233467899999999998777 799999998887665432
Q ss_pred eecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 301 SDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
..++++..++.++..+++.... .....++..++.+++.+.|.+. |++
T Consensus 225 -----------------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~ 271 (337)
T 3p1t_A 225 -----------------WFCNVGTLDLHALEAALDNDRA--REAHIAKTLAQRRRVADALRGL-GYR 271 (337)
T ss_dssp -----------------CTTCSCHHHHHHHHHHHTCHHH--HHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred -----------------CCCCCCHHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHHHHHHC-cCE
Confidence 1236677777777777664322 4555666777788888888776 543
No 48
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.96 E-value=4.5e-28 Score=228.78 Aligned_cols=259 Identities=16% Similarity=0.113 Sum_probs=196.8
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH----cCCC-CCC-cEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF----INAS-DSG-EIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~~~~-~~~-~v~~t~g~ 138 (368)
+++++|+.+... .+++.+.+++.+.+... .. .+....+.. ++|+.++++ +|.+ .++ +|++|+|+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~----~y~~~~g~~----~l~~~la~~l~~~~g~~~~~~~~v~~~~g~ 100 (386)
T 1u08_A 30 HQAINLSQGFPDFDGPRYLQERLAHHVAQG-AN----QYAPMTGVQ----ALREAIAQKTERLYGYQPDADSDITVTAGA 100 (386)
T ss_dssp TTCEECCCSSCSSCCCHHHHHHHHHHHHTT-CC----SCCCTTCCH----HHHHHHHHHHHHHHSCCCCTTTTEEEESSH
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHHhh-cc----CCCCCCCCH----HHHHHHHHHHHHHhCCCCCCCCCEEEcCCh
Confidence 457899998776 57889999998887641 01 111111123 455555555 5754 345 89999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
++++..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++ ++.+|+++|++++++++++|+++++
T Consensus 101 ~~a~~~~~~~~----~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 172 (386)
T 1u08_A 101 TEALYAAITAL----VRNGDEVICFDPSYDSYA----PAIALSGGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTP 172 (386)
T ss_dssp HHHHHHHHHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHHHHHHh----CCCCCEEEEeCCCchhHH----HHHHHcCCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCC
Confidence 99999999998 789999999999999854 34566799999999875 5788999999999889999999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCC-CCCccEEEecCcCcCCCCc--ceEEEEcc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQ-GLDADFLVASSHKMCGPTG--IGFLFGKS 284 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~-~~~~d~~~~s~~K~~g~~G--~G~l~~~~ 284 (368)
+||||.++| +++|.++|++||+++|+|++|+... .++ .+. ..+.|++++|+||.+|++| +|++++++
T Consensus 173 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 252 (386)
T 1u08_A 173 HNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA 252 (386)
T ss_dssp CTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH
Confidence 999999998 6899999999999999999998521 122 221 2468999999999999888 99999999
Q ss_pred cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 285 ~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++++.+++.... ...+.+.....++..+++.. ...++.++++..++.+++.+.|.+.
T Consensus 253 ~~~~~l~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 253 PISAEIRKVHQY---------------------LTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp HHHHHHHHHHHH---------------------HTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHh---------------------hccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 888766543210 11245666666777777654 2246778888999999999988765
No 49
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.96 E-value=3.5e-28 Score=229.56 Aligned_cols=266 Identities=11% Similarity=0.056 Sum_probs=200.8
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAI 142 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~ 142 (368)
++++++|..+... ++++.+.+++.+.+.... . .++....+..+++++.+++.+|.+ .+++|++|+|+++++
T Consensus 26 g~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~------~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~ 98 (391)
T 3dzz_A 26 KEKELPMWIAEMDFKIAPEIMASMEEKLKVAA-F------GYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI 98 (391)
T ss_dssp CTTCEECCSSCCSSCCCHHHHHHHHHHHTTCC-C------CCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCCCCCCCHHHHHHHHHHHhcCc-C------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence 3578889888766 678999999988876421 0 011113566677888888888843 224999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-C--CCCCHHHHHHhcc-cCceEEEEcccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-D--ESPDLDKLKEMLS-RKTKLVVIHHIS 218 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~--~~~d~~~l~~~l~-~~~~~v~~~~~~ 218 (368)
..++.++ +++||+|++.+++|++.. ..++..|++++.++.++ + +.+|+++|+++++ +++++|++++++
T Consensus 99 ~~~~~~l----~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~ 170 (391)
T 3dzz_A 99 SAMVRQF----TSPGDQILVQEPVYNMFY----SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPH 170 (391)
T ss_dssp HHHHHHH----SCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSB
T ss_pred HHHHHHh----CCCCCeEEECCCCcHHHH----HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCC
Confidence 9999998 889999999999998844 44566799999999852 2 3489999999998 689999999999
Q ss_pred cccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccccCCCCC---cc--EEEecCcCcCCCCc--ceEEEEc-
Q 017640 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDVQGLD---AD--FLVASSHKMCGPTG--IGFLFGK- 283 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~~~~~~~---~d--~~~~s~~K~~g~~G--~G~l~~~- 283 (368)
||||.++| +++|.++|++||+++|+|++|+... ...++.... .| +++.|+||.+|++| +|+++++
T Consensus 171 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~ 250 (391)
T 3dzz_A 171 NPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN 250 (391)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS
T ss_pred CCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC
Confidence 99999966 8899999999999999999998432 122222222 45 99999999888666 9999997
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE- 362 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~- 362 (368)
+++++.+..... .+...+++.....++..+++.... .++.++++..++.+++.+.|.+
T Consensus 251 ~~~~~~~~~~~~--------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 309 (391)
T 3dzz_A 251 PDLRARAEESFF--------------------LAGIGEPNLLAIPAAIAAYEEGHD-WLRELKQVLRDNFAYAREFLAKE 309 (391)
T ss_dssp HHHHHHHHHHHH--------------------HHTCSSCCTTHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--------------------hhccCCCCHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 777776653321 011225666677777777765333 3678889999999999999988
Q ss_pred hcCC
Q 017640 363 RHNT 366 (368)
Q Consensus 363 ~~g~ 366 (368)
++|+
T Consensus 310 ~~~~ 313 (391)
T 3dzz_A 310 VPEV 313 (391)
T ss_dssp CTTS
T ss_pred CCCc
Confidence 5664
No 50
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.96 E-value=8.5e-28 Score=230.55 Aligned_cols=273 Identities=11% Similarity=0.039 Sum_probs=200.9
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHh--hccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEe
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAY--NSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFT 135 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t 135 (368)
++++++|+.+.+. ++++.+.+++.+.+... ..++. .....++|+.++++++ +++ ++|++|
T Consensus 43 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~la~~~~~~~g~~~~~-~~i~~t 111 (437)
T 3g0t_A 43 GTKFCRMEMGVPGLPAPQIGIETEIQKLREGVASIYPN----------LDGLPELKQEASRFAKLFVNIDIPA-RACVPT 111 (437)
T ss_dssp TCCCEECCCCSCCSCCCHHHHHHHHHHHHHTGGGSCCC----------TTCCHHHHHHHHHHHHHHHCCCCCG-GGEEEE
T ss_pred CCCEEeccCcCCCCCCCHHHHHHHHHHHhCCcCcCCCC----------CCChHHHHHHHHHHHHHhhCCCCCc-ccEEEe
Confidence 3678999998877 57899999999888741 11111 1112367777777776 334 499999
Q ss_pred CCHHHHHHHHHHHccCCCC--CCCC--EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhc-ccCc
Q 017640 136 KNATEAINLVAYSWGLSNL--KSGD--EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEML-SRKT 209 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~--~~gd--~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l-~~~~ 209 (368)
+|+++++.+++.++ . ++|| +|++.+|+|++.. ..++..|++++.+++++ ++.+|+++|++++ ++++
T Consensus 112 ~g~t~al~~~~~~l----~~~~~gd~~~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~ 183 (437)
T 3g0t_A 112 VGSMQGCFVSFLVA----NRTHKNREYGTLFIDPGFNLNK----LQCRILGQKFESFDLFEYRGEKLREKLESYLQTGQF 183 (437)
T ss_dssp SHHHHHHHHHHHHH----TTSCTTCSCCEEEEESCCHHHH----HHHHHHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCC
T ss_pred CCHHHHHHHHHHHH----hcCCCCCccEEEEeCCCcHhHH----HHHHHcCCEEEEEeecCCCCccCHHHHHHHHhcCCc
Confidence 99999999999998 6 8999 9999999888844 44556699999999864 4578999999999 7789
Q ss_pred eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccc--------cCCC-CCccEEEecCcCcCC
Q 017640 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVV--------DVQG-LDADFLVASSHKMCG 273 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~--------~~~~-~~~d~~~~s~~K~~g 273 (368)
++|++++++||||.++| +++|+++|++||+++|+|++|+... .++ ++.. .+.+++++|+||.+|
T Consensus 184 ~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 263 (437)
T 3g0t_A 184 CSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFS 263 (437)
T ss_dssp CEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTS
T ss_pred eEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCC
Confidence 99999999999999998 6778999999999999999998422 121 2322 567799999999999
Q ss_pred CCc--ceEEEEcccccc-cCCCccc---CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh--CHHHH
Q 017640 274 PTG--IGFLFGKSDLLS-AMPPFLG---GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI--GMQKI 345 (368)
Q Consensus 274 ~~G--~G~l~~~~~li~-~l~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~--g~~~i 345 (368)
++| +|++++++++++ .+..... ++... .... ....+....+.+.....++..+++..... .++.+
T Consensus 264 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 336 (437)
T 3g0t_A 264 YAGQRIGVLMISGKLYEREYPDLEESFGRLRFG-EALS------SSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDS 336 (437)
T ss_dssp CGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHH-HHHH------TTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHH
T ss_pred CccceeEEEEECHHHhhhhhhcccccccccchh-HHHH------HHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHH
Confidence 777 999999998887 6211110 00000 0000 00001113367888888888888765432 17889
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 017640 346 HAYEVKWIICSIIVIQER 363 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~ 363 (368)
+++..++.+++.+.|.++
T Consensus 337 ~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 337 VIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999999876
No 51
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.96 E-value=7.7e-28 Score=226.21 Aligned_cols=257 Identities=14% Similarity=0.085 Sum_probs=196.3
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHH-hhccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEeC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTK 136 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~ 136 (368)
+++++.|..+... +.++.+.+++.+.+.. ...++. .+ .++|+.++++++ .++ ++|++|+
T Consensus 22 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~-----~~-------~~lr~~la~~~~~~~~~~~~~-~~i~~t~ 88 (377)
T 3fdb_A 22 GQGVLPLWVAESDFSTCPAVLQAITDAVQREAFGYQP-----DG-------SLLSQATAEFYADRYGYQARP-EWIFPIP 88 (377)
T ss_dssp CTTSEECCSSCCCSCCCHHHHHHHHHHHHTTCCSSCC-----SS-------CCHHHHHHHHHHHHHCCCCCG-GGEEEES
T ss_pred CCCeeeecccCCCCCCCHHHHHHHHHHHHcCCCCCCC-----CC-------HHHHHHHHHHHHHHhCCCCCH-HHEEEeC
Confidence 3678899888766 6789999999988875 211111 00 256777777766 444 4999999
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
|+++++..++.++ +++||+|++..|+|++.. ..++..|++++.++.+++ +|+++|+++++++++++++++
T Consensus 89 g~~~a~~~~~~~~----~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~--~d~~~l~~~l~~~~~~v~i~~ 158 (377)
T 3fdb_A 89 DVVRGLYIAIDHF----TPAQSKVIVPTPAYPPFF----HLLSATQREGIFIDATGG--INLHDVEKGFQAGARSILLCN 158 (377)
T ss_dssp CHHHHHHHHHHHH----SCTTCCEEEEESCCTHHH----HHHHHHTCCEEEEECTTS--CCHHHHHHHHHTTCCEEEEES
T ss_pred ChHHHHHHHHHHh----cCCCCEEEEcCCCcHhHH----HHHHHcCCEEEEccCCCC--CCHHHHHHHhccCCCEEEEeC
Confidence 9999999999998 889999999999999854 345556999999999876 899999999998899999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc-----ccccCC---CCCccEEEecCcCcCCCCc--ceEEEE-
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH-----MVVDVQ---GLDADFLVASSHKMCGPTG--IGFLFG- 282 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~-----~~~~~~---~~~~d~~~~s~~K~~g~~G--~G~l~~- 282 (368)
++||||.++| +++|.++|++||+++|+|++|+... ...++. ..+.++++.|+||.+|++| +|++++
T Consensus 159 p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 238 (377)
T 3fdb_A 159 PYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFS 238 (377)
T ss_dssp SBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeC
Confidence 9999999998 6677778999999999999998521 111222 2345689999999998777 898776
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+..... ...++++.....++..+++...+ .++.++++..++.+++.+.|++
T Consensus 239 ~~~~~~~~~~~~~---------------------~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 296 (377)
T 3fdb_A 239 NPSDAEHWQQLSP---------------------VIKDGASTLGLIAAEAAYRYGTD-FLNQEVAYLKNNHDFLLHEIPK 296 (377)
T ss_dssp SHHHHHHHHHSCH---------------------HHHCCCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH---------------------hhcCCCCHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 6677665543221 11236777777777777775332 3678889999999999999987
Q ss_pred -hcCC
Q 017640 363 -RHNT 366 (368)
Q Consensus 363 -~~g~ 366 (368)
++|+
T Consensus 297 ~~~~~ 301 (377)
T 3fdb_A 297 RIPGA 301 (377)
T ss_dssp HSTTC
T ss_pred hCCCc
Confidence 5554
No 52
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.96 E-value=8.4e-29 Score=239.07 Aligned_cols=277 Identities=9% Similarity=0.032 Sum_probs=207.4
Q ss_pred hhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCC-C--------cchhhHHHHHHHHHHHHH
Q 017640 49 HITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHR-G--------IHFLSAKATDEYELARKK 119 (368)
Q Consensus 49 ~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~r~~ 119 (368)
..++++|+.+ +..+|||+++.++.++.|.+++.+.....+.++.. . ....+....+..++++++
T Consensus 69 ~~~~~~~~~~-------~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (456)
T 2z67_A 69 KLFLKFLSMM-------DTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILES 141 (456)
T ss_dssp HHHHHHHHTT-------BGGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-------cccccccccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHHHHHHH
Confidence 4467778776 45689999999999999998877643111111100 0 011222466788899999
Q ss_pred HHHHcCCCCCCcEEEeCCHH-HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC---CCCCC
Q 017640 120 VAAFINASDSGEIVFTKNAT-EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL---NDDES 195 (368)
Q Consensus 120 la~~~~~~~~~~v~~t~g~t-~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~---~~~~~ 195 (368)
+++++|+++. +++|+|+| .++..++.++.. ..+|+.|++++++|++. ...++..|++++.++. ++++.
T Consensus 142 la~~~g~~~~--~~~t~g~te~a~~~al~~~~~--~~~~~~vi~~~~~h~s~----~~~~~~~G~~~~~v~~~~~~~~~~ 213 (456)
T 2z67_A 142 FFKQLGLNVH--AIATPISTGMSISLCLSAARK--KYGSNVVIYPYASHKSP----IKAVSFVGMNMRLVETVLDGDRVY 213 (456)
T ss_dssp HHHHTTCCCE--EEEESSCHHHHHHHHHHHHHH--HHCCCEEEEECCCCHHH----HHHHHHTTCEEEEECCEEETTEEE
T ss_pred HHHHcCCCCC--EEEeCcHHHHHHHHHHHHHHH--hcCCCEEEEECCCcHHH----HHHHHHcCCCceEEEEeccCCCCC
Confidence 9999999753 99999999 456556655411 12678899999999984 3445667999999987 56689
Q ss_pred CCHHHHHHhc-c----cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc---cccCCCC--CccEEE
Q 017640 196 PDLDKLKEML-S----RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQGL--DADFLV 265 (368)
Q Consensus 196 ~d~~~l~~~l-~----~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~~~--~~d~~~ 265 (368)
+|+++|++++ + .++.+|++++++|+||.+.|+++|.++|+++|+++++|++|+.... +.+.... ++|+++
T Consensus 214 ~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~ 293 (456)
T 2z67_A 214 VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVV 293 (456)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEE
T ss_pred cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEE
Confidence 9999999999 4 3677888999999999999999999999999999999999875433 3333222 799999
Q ss_pred ecCcCc-CCCCcceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 266 ASSHKM-CGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 266 ~s~~K~-~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
+|+||+ ++|.|+|+++++ +++++.+.+...|+. +....+++..++..+...+++
T Consensus 294 ~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~~~g~~------------------------~~~~~~~~~aal~~l~~~~~~ 349 (456)
T 2z67_A 294 SSSDKNLLTPIGGGLVYSTDAEFIKEISLSYPGRA------------------------SATPVVNTLVSLLSMGSKNYL 349 (456)
T ss_dssp EEHHHHHCCCSSCEEEEESCHHHHHHHHTTSCSCB------------------------CSHHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCcCCCCCeEEEEEcCHHHHhhcCcCCCCCC------------------------CCCHHHHHHHHHHHHHHHHHH
Confidence 999995 678899999995 567766654443321 112356677777777777899
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 017640 344 KIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.+.++..++++++.+.|.+++
T Consensus 350 ~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 350 ELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999886
No 53
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.96 E-value=3.5e-28 Score=228.95 Aligned_cols=263 Identities=12% Similarity=0.071 Sum_probs=201.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH-hhccCCCCcchhhHHHHHHHHHHHHHHHHHcC--CCCCCcEEEeCCHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFIN--ASDSGEIVFTKNATEA 141 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~--~~~~~~v~~t~g~t~a 141 (368)
++++.|..+... ++++.+.+++.+.+.. ...++. ...+..+++++.+++.+| .++ ++|++|+|++++
T Consensus 24 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~--------~~~~~~~~l~~~l~~~~g~~~~~-~~v~~~~g~~~a 94 (383)
T 3kax_A 24 EELIHAWIADMDFEVPQPIQTALKKRIEHPIFGYTL--------PPENIGDIICNWTKKQYNWDIQK-EWIVFSAGIVPA 94 (383)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCCCCCCC--------CCTTHHHHHHHHHHHHHCCCCCG-GGEEEESCHHHH
T ss_pred CCeeecccccCCCCCCHHHHHHHHHHHhcCCCCCCC--------CCHHHHHHHHHHHHHHhCCCCCh-hhEEEcCCHHHH
Confidence 578899888766 6789999999988864 111111 124566678888888888 444 499999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC---CCCCHHHHHHhcccCceEEEEcccc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
+..++.++ +++||+|++.+|+|++.. ..++..|++++.++++++ +.+|+++|++++++++++|++++++
T Consensus 95 ~~~~~~~l----~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~ 166 (383)
T 3kax_A 95 LSTSIQAF----TKENESVLVQPPIYPPFF----EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPH 166 (383)
T ss_dssp HHHHHHHH----CCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSB
T ss_pred HHHHHHHh----CCCCCEEEEcCCCcHHHH----HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCC
Confidence 99999998 889999999999988854 445667999999998643 3489999999998899999999999
Q ss_pred cccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccCCC-----CCccEEEecCcCcCCCCc--ceEEEE-c
Q 017640 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQG-----LDADFLVASSHKMCGPTG--IGFLFG-K 283 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~~-----~~~d~~~~s~~K~~g~~G--~G~l~~-~ 283 (368)
||||.++| +++|.++|++||+++|+|++|+.... ..++.. .+.++++.|+||.+|++| +|++++ +
T Consensus 167 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 246 (383)
T 3kax_A 167 NPIGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN 246 (383)
T ss_dssp TTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC
T ss_pred CCCCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC
Confidence 99999999 56667779999999999999985321 112211 256699999999988777 899988 5
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE- 362 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~- 362 (368)
+++++.++..... +..++++.....++..+++...+ .++.++++..++.+++.+.|++
T Consensus 247 ~~~~~~~~~~~~~--------------------~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 305 (383)
T 3kax_A 247 EKLRQAFTSIQYR--------------------QGFHGLNIFAYTAMQSAYTECND-WLNEIRFYIEDNAKFACEYIKDH 305 (383)
T ss_dssp HHHHHHHHHHHHH--------------------TTCCCCCHHHHHHHHHHTTTCHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh--------------------cccCCCCHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 6777666543221 11237788888888777765333 3678888899999999999987
Q ss_pred hcCC
Q 017640 363 RHNT 366 (368)
Q Consensus 363 ~~g~ 366 (368)
++|+
T Consensus 306 ~~~~ 309 (383)
T 3kax_A 306 IPTL 309 (383)
T ss_dssp CTTC
T ss_pred CCCc
Confidence 4554
No 54
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.96 E-value=2.8e-28 Score=231.59 Aligned_cols=267 Identities=14% Similarity=0.106 Sum_probs=201.1
Q ss_pred CeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCCHHHHH
Q 017640 67 KLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAI 142 (368)
Q Consensus 67 ~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~t~g~t~a~ 142 (368)
.+++|..+.+. ++++.+++++.+.+....... +....+..+..+++++.+++++|.+ ++++|++|+|+++++
T Consensus 40 ~~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~----y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~ 115 (407)
T 3nra_A 40 RPVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQA----YTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGAL 115 (407)
T ss_dssp CCEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHH----SCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHH
T ss_pred ceeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCC----cCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHH
Confidence 57888887655 578899999998887532111 1111223567778888999999985 224899999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC------CCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL------NDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~------~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
..++.++ +++||+|++..|+|++. ...++..|++++.++. +.++.+|+++|++++++++++|++++
T Consensus 116 ~~~~~~l----~~~gd~vl~~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 187 (407)
T 3nra_A 116 FLAVAAT----VARGDKVAIVQPDYFAN----RKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSN 187 (407)
T ss_dssp HHHHHTT----CCTTCEEEEEESCCTHH----HHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEES
T ss_pred HHHHHHh----CCCCCEEEEcCCcccch----HHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcC
Confidence 9999988 88999999999999874 4455667999999998 36688899999999988999999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cC--CCCCccEEEecCcCcCCCCc--ceEEEE
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DV--QGLDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~--~~~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
++||||.++| +++|.++|++||+++|+|++|+.+.. ++ .+ ...+.+++++|+||.+|++| +|++++
T Consensus 188 p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~ 267 (407)
T 3nra_A 188 PNNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFG 267 (407)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEE
T ss_pred CCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEc
Confidence 9999999999 89999999999999999999985321 11 11 22456799999999999777 899999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+......+ ..+.+.....++..+++... ..++...++.+++.+++.+.|.+
T Consensus 268 ~~~~~~~l~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~ 325 (407)
T 3nra_A 268 SRAIIARMEKLQAIV---------------------SLRAAGYSQAVLRGWFDEAP-GWMEDRIARHQAIRDELLHVLRG 325 (407)
T ss_dssp CHHHHHHHHHHHHHH---------------------TSSSCHHHHGGGGGTTCCCT-THHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhhh---------------------ccCCChHHHHHHHHHHhccc-hHHHHHHHHHHHHHHHHHHHHhc
Confidence 998887765433211 11344444444444443111 12567778888899999999988
Q ss_pred hcCCC
Q 017640 363 RHNTT 367 (368)
Q Consensus 363 ~~g~t 367 (368)
+++++
T Consensus 326 ~~~~~ 330 (407)
T 3nra_A 326 CEGVF 330 (407)
T ss_dssp STTCB
T ss_pred CCCce
Confidence 76654
No 55
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.96 E-value=6.4e-27 Score=229.34 Aligned_cols=265 Identities=19% Similarity=0.134 Sum_probs=207.1
Q ss_pred CcHHHHHHHHHHHHHhh-ccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC-CCcE--EEeCCHHHHHHHHHHHccCCCC
Q 017640 79 KPIAVLKALQNYYEAYN-SNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEI--VFTKNATEAINLVAYSWGLSNL 154 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~v--~~t~g~t~a~~~~~~~~~~~~~ 154 (368)
..+.+.+.+.+.+.... .++. .+...+...+...++++++++++|.+. ++++ ++|+|+++|+..++.++ .
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~----~ 181 (514)
T 3mad_A 108 GDEHHIAFLNEVYALQSQSNPL--HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTY----R 181 (514)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTT--CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHH----H
T ss_pred CCCCHHHHHHHHHHHHhhcCCc--ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHH----H
Confidence 34555566655554422 2222 222334456777789999999999873 1266 99999999999999988 4
Q ss_pred CCC--------CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC
Q 017640 155 KSG--------DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 155 ~~g--------d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (368)
++| |+|+++.+.|++. ...++..|++++.|++++++.+|+++|++++++++++|++++++||||.+.|
T Consensus 182 ~~g~~~~g~~~d~Vi~~~~~~~~~----~~~~~~~G~~v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~ 257 (514)
T 3mad_A 182 DWARATKGITAPEAVVPVSAHAAF----DKAAQYFGIKLVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP 257 (514)
T ss_dssp HHHHHHHCCSSCEEEEETTSCTHH----HHHHHHHTCEEEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC
T ss_pred HHhhhhcCCCCCeEEEeCccchHH----HHHHHHcCCeeEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC
Confidence 444 8999999999984 4455566999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCcCCcc-----------cccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcc
Q 017640 227 IEEIVHWSHDVGAKVLVDACQSVPHM-----------VVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~~~~~~-----------~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~ 294 (368)
+++|.++|++||+++|+|++|+.+.. +++....+.|++++|+||+ +++.|+|+++++++.+.......
T Consensus 258 l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~ 337 (514)
T 3mad_A 258 IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFI 337 (514)
T ss_dssp HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEE
T ss_pred HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhcccccc
Confidence 99999999999999999999985433 3444556899999999996 77888999999987665433221
Q ss_pred c----CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 295 G----GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 295 ~----g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
. ++.. ......|+++....+++.++++.+...+++.+.++..++++++.+.|.+++|++
T Consensus 338 ~~~~~~~~~--------------~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 400 (514)
T 3mad_A 338 AADWPGGLY--------------FSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLK 400 (514)
T ss_dssp ESSCTTCSE--------------EESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred ccccCCCcc--------------cCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 1 1110 011235688888889999999999888899999999999999999999877753
No 56
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.96 E-value=4.4e-28 Score=226.03 Aligned_cols=261 Identities=14% Similarity=0.098 Sum_probs=198.3
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
+.++||+++..+++++.+.+++.+.+..+. .+.+..+..+++++.+++++|.+++ +|++|+|+++|+..+
T Consensus 13 p~~i~l~~~~~~~~~~~v~~a~~~~~~~~~---------~~~g~~~~~~~~~~~l~~~~g~~~~-~v~~~~g~t~a~~~~ 82 (359)
T 1svv_A 13 PKPYSFVNDYSVGMHPKILDLMARDNMTQH---------AGYGQDSHCAKAARLIGELLERPDA-DVHFISGGTQTNLIA 82 (359)
T ss_dssp --CEECSCSCSSCCCHHHHHHHHHHTTCCC---------CSTTCSHHHHHHHHHHHHHHTCTTS-EEEEESCHHHHHHHH
T ss_pred CeeEEecCCCcCCCCHHHHHHHHHHHhhcc---------ccccccHHHHHHHHHHHHHhCCCCc-cEEEeCCchHHHHHH
Confidence 567999999888999999999988875321 1112256677899999999997654 899999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC-------ceEEEEcccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK-------TKLVVIHHIS 218 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~-------~~~v~~~~~~ 218 (368)
+.++ .++||+|++.+++|++.... ..++..|.+++.++.+ ++.+|+++|+++++++ +++|+++++
T Consensus 83 ~~~~----~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~~v~~~-~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~- 154 (359)
T 1svv_A 83 CSLA----LRPWEAVIATQLGHISTHET--GAIEATGHKVVTAPCP-DGKLRVADIESALHENRSEHMVIPKLVYISNT- 154 (359)
T ss_dssp HHHH----CCTTEEEEEETTSHHHHSST--THHHHTTCCEEEECCT-TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-
T ss_pred HHHH----hCCCCEEEEcccchHHHHHH--HHHhcCCCeeEEEeCC-CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-
Confidence 9998 78999999999999886542 1345679999999985 7889999999999776 899999999
Q ss_pred cccccccC---HHHHHHHHHhcCCEEEEecCC---cCCcccccCCC----CCccEEEecCcCcCCCCcceEEEEcccccc
Q 017640 219 NMLASILP---IEEIVHWSHDVGAKVLVDACQ---SVPHMVVDVQG----LDADFLVASSHKMCGPTGIGFLFGKSDLLS 288 (368)
Q Consensus 219 n~tG~~~~---l~~i~~l~~~~g~~li~D~a~---~~~~~~~~~~~----~~~d~~~~s~~K~~g~~G~G~l~~~~~li~ 288 (368)
||||.++| +++|.++|++||+++|+|++| +.+..+.+... ...|++++|++|+.++.|+|++++++++++
T Consensus 155 ~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~ 234 (359)
T 1svv_A 155 TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKP 234 (359)
T ss_dssp CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCT
T ss_pred CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHH
Confidence 79999999 889999999999999999999 54554443322 357899999999878888999999999887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+++....++. .+ ..+.....++. ..+.+.+.+.+.++..++.+++.+.| +.+|++
T Consensus 235 ~~~~~~~~~~~----------------~~---~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~ 290 (359)
T 1svv_A 235 NARHLIKQRGA----------------LM---AKGWLLGIQFE---VLMKDNLFFELGAHSNKMAAILKAGL-EACGIR 290 (359)
T ss_dssp THHHHHHHTTC----------------CC---TTTHHHHHHHH---HHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCC
T ss_pred HHHHHHhcCCc----------------cc---ccchhhHHHHH---HHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeE
Confidence 66543211110 00 11222222222 23333346788899999999999999 666654
No 57
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.96 E-value=1.7e-27 Score=225.83 Aligned_cols=261 Identities=15% Similarity=0.171 Sum_probs=201.1
Q ss_pred CCeEEeccCCC-CC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAAT-SQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~-~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
++++.|+.+.+ +. +++.+.+++.+.+.... ... ..+....+..+..+++++.+++++|.+ ++++|+|+++|+.
T Consensus 43 ~~~idl~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~-~~~~~~~g~~~~~~~l~~~la~~~g~~---~v~~~~ggt~a~~ 117 (398)
T 3a2b_A 43 RRVLMFGSNSYLGLTTDTRIIKAAQDALEKYG-TGC-AGSRFLNGTLDIHVELEEKLSAYVGKE---AAILFSTGFQSNL 117 (398)
T ss_dssp EEEEECSCSCTTCGGGCHHHHHHHHHHHHHHC-SCC-CSBTTTTCCCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHH
T ss_pred ceEEEeecccccCCCCCHHHHHHHHHHHHHcC-CCC-CCcCcccCCcHHHHHHHHHHHHHhCCC---cEEEECCHHHHHH
Confidence 55777887766 53 78999999998887642 111 111111223466778999999999973 8999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc----CceEEEEccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHISN 219 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~n 219 (368)
.++.++ +++||.|++.+|.|++... .++..|++++.++. +|+++|++++++ ++++|++++++|
T Consensus 118 ~~~~~~----~~~gd~V~~~~p~~~~~~~----~~~~~g~~~~~v~~-----~d~~~l~~~l~~~~~~~~~~v~~~~~~n 184 (398)
T 3a2b_A 118 GPLSCL----MGRNDYILLDERDHASIID----GSRLSFSKVIKYGH-----NNMEDLRAKLSRLPEDSAKLICTDGIFS 184 (398)
T ss_dssp HHHHHS----SCTTCEEEEETTCCHHHHH----HHHHSSSEEEEECT-----TCHHHHHHHHHTSCSSSCEEEEEESBCT
T ss_pred HHHHHH----hCCCCEEEECCccCHHHHH----HHHHcCCceEEeCC-----CCHHHHHHHHHhhccCCceEEEEeCCCC
Confidence 999998 8899999999999988543 45567999999987 389999999876 789999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcc---cccC-C--C--CCccEEEecCcCcCCCCcceEEEEcccccccCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM---VVDV-Q--G--LDADFLVASSHKMCGPTGIGFLFGKSDLLSAMP 291 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~-~--~--~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~ 291 (368)
|||.+.|+++|.++|++||+++|+|++|+.+.. ...+ . . .++|++++|+||.+|++| |++++++++++.+.
T Consensus 185 ptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~ 263 (398)
T 3a2b_A 185 MEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG-GFVAGDADVIDFLK 263 (398)
T ss_dssp TTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EEEEECHHHHHHHH
T ss_pred CCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC-cEEEeCHHHHHHHH
Confidence 999999999999999999999999999986643 1111 1 1 126999999999999888 99999998887665
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+.... ....++++..+.+++..+++.++. .+.++++..++.+++.+.|.+. |++
T Consensus 264 ~~~~~-------------------~~~~~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~ 317 (398)
T 3a2b_A 264 HNARS-------------------VMFSASMTPASVASTLKALEIIQN--EPEHIEKLWKNTDYAKAQLLDH-GFD 317 (398)
T ss_dssp HHCHH-------------------HHSSBCCCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred Hhccc-------------------ceecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 42110 011235666666667778877643 5678888999999999999876 543
No 58
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.96 E-value=4e-27 Score=230.74 Aligned_cols=282 Identities=15% Similarity=0.124 Sum_probs=202.7
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
.|+++...+..+..+...+ +.. ..+++...+..++...+...++++++++++|.+. +++++|+|+|+|+.+++.+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~---l~~-~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~-~~~~~t~ggtea~~~al~~ 184 (515)
T 2jis_A 110 RFFNQLFSGLDPHALAGRI---ITE-SLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSS-GDGIFCPGGSISNMYAVNL 184 (515)
T ss_dssp TEESSSCCCCCHHHHHHHH---HHH-HHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSS-CEEEEESSHHHHHHHHHHH
T ss_pred CeEEEeeCCCCHHHHHHHH---HHH-HhccCCCchhhchHHHHHHHHHHHHHHHHhCCCC-CCeEEcCCcHHHHHHHHHH
Confidence 5899888777777776633 322 2344444455566778888999999999999985 4899999999999998887
Q ss_pred ccCCC---CC-CCC------EEEEcCCCCcccHHHHHHHHHHcCC---EEEEEeCCCCCCCCHHHHHHhccc------Cc
Q 017640 149 WGLSN---LK-SGD------EVILTVAEHHSAIVPWQLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLSR------KT 209 (368)
Q Consensus 149 ~~~~~---~~-~gd------~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~------~~ 209 (368)
++... ++ +|+ +|++++++|+++... ++..|. +++.||.++++.+|+++|++++++ ++
T Consensus 185 ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~----~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~ 260 (515)
T 2jis_A 185 ARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKG----AAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVP 260 (515)
T ss_dssp HHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHH----HHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHhhHHhhcCccccCCeEEEECCCccHHHHHH----HHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCc
Confidence 62100 12 464 899999999986544 444566 899999988899999999999975 48
Q ss_pred eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-----CCCC-CccEEEecCcCcCC-CCcceEEEE
Q 017640 210 KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-----VQGL-DADFLVASSHKMCG-PTGIGFLFG 282 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~g-~~G~G~l~~ 282 (368)
++|++++++|+||.+.|+++|.++|++||+++++|++|+.+..+.+ +... ++|++++|+||+++ |.|+|++++
T Consensus 261 ~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~ 340 (515)
T 2jis_A 261 FLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLL 340 (515)
T ss_dssp EEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEE
T ss_pred EEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEE
Confidence 9999999999999999999999999999999999999998776543 3333 68999999999765 778999999
Q ss_pred ccc--cccc----CCCcccCCcceeecccCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 283 KSD--LLSA----MPPFLGGGEMISDVFLDHSTFA-DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 283 ~~~--li~~----l~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
+++ +++. ..++..+++.......+...+. ...+|+ . ..++..++..+...|++.+.++..+++++
T Consensus 341 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~-----~---al~~~~~l~~lg~~g~~~~~~~~~~~a~~ 412 (515)
T 2jis_A 341 QDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRV-----D---CLKLWLMWKAQGDQGLERRIDQAFVLARY 412 (515)
T ss_dssp SCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCC-----C---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcc-----c---HHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 987 5554 3344433322110000000000 011111 1 23444456666667889999999999999
Q ss_pred HHHHHHhhcCCC
Q 017640 356 SIIVIQERHNTT 367 (368)
Q Consensus 356 l~~~l~~~~g~t 367 (368)
+.+.|.+++|++
T Consensus 413 l~~~L~~~~g~~ 424 (515)
T 2jis_A 413 LVEEMKKREGFE 424 (515)
T ss_dssp HHHHHHTSTTEE
T ss_pred HHHHHhcCCCEE
Confidence 999999987754
No 59
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.96 E-value=2e-27 Score=222.26 Aligned_cols=250 Identities=12% Similarity=0.102 Sum_probs=196.1
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHH----hhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEA----YNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++++++|+.+.+. ++++.+.+++.+.+.. ...++..+ ..++|+++++++|.+++ +|++|+|++
T Consensus 25 ~~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~-----------~~~lr~~la~~~g~~~~-~i~~t~g~~ 92 (360)
T 3hdo_A 25 IASWIKLNTNENPYPPSPEVVKAILEELGPDGAALRIYPSAS-----------SQKLREVAGELYGFDPS-WIIMANGSD 92 (360)
T ss_dssp CTTSEECSSCCCSSCCCHHHHHHHHHHHTTTCGGGGSCCCSS-----------CHHHHHHHHHHHTCCGG-GEEEESSHH
T ss_pred ccceeeccCCCCCCCCCHHHHHHHHHHHhcccchhhcCCCCc-----------hHHHHHHHHHHhCcCcc-eEEEcCCHH
Confidence 4678999999877 6789999999988765 33332211 23899999999997664 999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
+|+..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++++.+ +++++++ +++++++++++|
T Consensus 93 ~al~~~~~~l----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~--~~l~~~~--~~~~v~i~~p~n 160 (360)
T 3hdo_A 93 EVLNNLIRAF----AAEGEEIGYVHPSYSYYG----TLAEVQGARVRTFGLTGDFRI--AGFPERY--EGKVFFLTTPNA 160 (360)
T ss_dssp HHHHHHHHHH----CCTTCEEEEESSSCTHHH----HHHHHHTCEEEEECBCTTSSB--TTCCSSB--CSSEEEEESSCT
T ss_pred HHHHHHHHHH----hCCCCEEEEcCCChHHHH----HHHHHCCCEEEEeeCCCCCCH--HHHHhhc--CCCEEEEeCCCC
Confidence 9999999998 889999999999998854 445566999999999876655 4444433 467999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcC--CcccccC-CCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSV--PHMVVDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~--~~~~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~ 294 (368)
|||.++|+++|.++|+++|+++|+|++|+. +...+.. ...+.+++++|+||.+|++| +|++++++++++.+....
T Consensus 161 ptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~ 240 (360)
T 3hdo_A 161 PLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIR 240 (360)
T ss_dssp TTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHS
T ss_pred CCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhC
Confidence 999999999999999999999999999983 2111111 22356789999999988776 899999988887665332
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
. ..+.+.....++..+++... .++.++++..++.+++.+.|.+.
T Consensus 241 ~-----------------------~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 241 D-----------------------HYNLDRLAQAACVAALRDQA--YLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp C-----------------------SCCSCHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-----------------------CCCCCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHC
Confidence 1 12577788888888877522 36788888999999999999876
No 60
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.96 E-value=1.2e-27 Score=227.41 Aligned_cols=260 Identities=15% Similarity=0.120 Sum_probs=197.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-C-CCcEEEeC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-D-SGEIVFTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~-~~~v~~t~ 136 (368)
.++++|+.+.+. ..++.+.+++.+.+.. ...++. .....++|+++++++ |.+ . .++|++|+
T Consensus 47 ~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~ 116 (404)
T 2o1b_A 47 LPLINMAVGIPDGPTPQGIIDHFQKALTIPENQKYGA----------FHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILY 116 (404)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTCHHHHSCCC----------TTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEES
T ss_pred CCEEecCCcCCCCCCCHHHHHHHHHHHhCCCCCCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcC
Confidence 567889888766 4678899998887642 111211 011236777777776 875 2 24899999
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEc
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
|+++++..++.++ +++||+|++.+|+|++... .++..|++++.++.++ ++.+|+++|++++++++++|+++
T Consensus 117 G~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~ 188 (404)
T 2o1b_A 117 GTKNGLVAVPTCV----INPGDYVLLPDPGYTDYLA----GVLLADGKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLT 188 (404)
T ss_dssp SHHHHHHHHHHHH----CCTTCEEEEEESCCSSHHH----HHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEEC
T ss_pred CcHHHHHHHHHHh----cCCCCEEEEcCCCchhHHH----HHHHCCCEEEEeccCcccCcCCHHHHHHhhccCceEEEEc
Confidence 9999999999998 7899999999999998543 4456799999999876 34689999999888788999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccCCC----CCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQG----LDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~~----~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
+++||||.++| +++|.++|++||+++|+|++|+.... +.++.. .+.+++++|+||.+|++| +|+++++
T Consensus 189 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~ 268 (404)
T 2o1b_A 189 YPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGN 268 (404)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEEC
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCchhheEeEecC
Confidence 99999999998 77899999999999999999985331 112211 246799999999998777 7999999
Q ss_pred ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 284 SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 284 ~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++++.+.+.... ..++.+.....++..+++... ..++.++++.+++.+++.+.|++.
T Consensus 269 ~~~~~~l~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 269 KDMIQALKKYQTH---------------------TNAGMFGALQDAAIYALNHYD-DFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp HHHHHHHHHHHHH---------------------HCCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhh---------------------ccCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9888776543221 123567777777777776532 246788888889999999999876
Q ss_pred cCC
Q 017640 364 HNT 366 (368)
Q Consensus 364 ~g~ 366 (368)
|+
T Consensus 327 -g~ 328 (404)
T 2o1b_A 327 -DL 328 (404)
T ss_dssp -TC
T ss_pred -CC
Confidence 44
No 61
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=6.4e-27 Score=224.09 Aligned_cols=257 Identities=19% Similarity=0.181 Sum_probs=200.9
Q ss_pred CCeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.++.|..+.+ + ..++.+.+++.+.+..+.... +.+....+..+...++++.+++++|.+ ++++++++++++.
T Consensus 64 ~~~id~~~~~~lg~~~~~~v~~a~~~~~~~~~~~~--~~~~~~~G~~~~~~~l~~~la~~~g~~---~~i~~~sGs~a~~ 138 (427)
T 2w8t_A 64 KDTILLGTYNYMGMTFDPDVIAAGKEALEKFGSGT--CGSRMLNGTFHDHMEVEQALRDFYGTT---GAIVFSTGYMANL 138 (427)
T ss_dssp EEEEECSCCCTTCGGGCHHHHHHHHHHHHHHCSCC--CSCTTTTCCCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHH
T ss_pred ceEEEEECcccccCCCCHHHHHHHHHHHHHhCCCC--cccccccCCcHHHHHHHHHHHHHhCCC---ceEEecCcHHHHH
Confidence 45667777654 5 478999999999887743111 111112222466778999999999975 5566777778999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc----CceEEEEccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR----KTKLVVIHHISN 219 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~----~~~~v~~~~~~n 219 (368)
.++.++ +++||.|++..+.|.+.... ++..|++++.++.. |+++|++++++ ++++|++++++|
T Consensus 139 ~al~~l----~~~gd~vl~~~~~h~~~~~~----~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~~~n 205 (427)
T 2w8t_A 139 GIISTL----AGKGEYVILDADSHASIYDG----CQQGNAEIVRFRHN-----SVEDLDKRLGRLPKEPAKLVVLEGVYS 205 (427)
T ss_dssp HHHHHH----SCTTCEEEEETTCCHHHHHH----HHHSCSEEEEECTT-----CHHHHHHHHHTSCSSSCEEEEEESEET
T ss_pred HHHHHh----cCCCCEEEECCcccHHHHHH----HHHcCCeeEEeCCC-----CHHHHHHHHHhccCCCCeEEEEcCCCC
Confidence 999988 78999999999999986543 45569999988853 89999999876 789999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAM 290 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l 290 (368)
|||.+.|+++|.++|++||+++|+|++|+.+... +++. .++|++++|+||.+|++| |++++++++++.+
T Consensus 206 ~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~-~~~di~~~s~sK~~g~~g-G~v~~~~~l~~~l 283 (427)
T 2w8t_A 206 MLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLE-GQIDFVVGTFSKSVGTVG-GFVVSNHPKFEAV 283 (427)
T ss_dssp TTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCT-TCCSEEEEESSSTTCSCC-EEEEECCTTGGGG
T ss_pred CCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCC-cCCcEEEecchhhhccCC-CEEEeCHHHHHHH
Confidence 9999999999999999999999999999976543 3332 267999999999999887 9999999988877
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+.... ..+ .++.+..+++++..+++.+.. .+.++++..++.+++.+.|.+.
T Consensus 284 ~~~~~~------------------~~~-~~~~~~~~~aa~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 335 (427)
T 2w8t_A 284 RLACRP------------------YIF-TASLPPSVVATATTSIRKLMT--AHEKRERLWSNARALHGGLKAM 335 (427)
T ss_dssp GGTCHH------------------HHS-SCCCCHHHHHHHHHHHHHHTS--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccc------------------ccc-cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc
Confidence 643110 011 346788888888888887653 5788899999999999999876
No 62
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.96 E-value=7.1e-28 Score=229.44 Aligned_cols=259 Identities=20% Similarity=0.167 Sum_probs=194.7
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCC-cEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSG-EIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~-~v~~t~g~ 138 (368)
+++++|+.+... +.++.+.+++.+.+... .. .+....+.. ++|+.+++++ |.+ .++ +|++|+|+
T Consensus 25 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~----~y~~~~g~~----~l~~~la~~~~~~~g~~~~~~~~v~~t~g~ 95 (411)
T 2o0r_A 25 IGAVNLGQGFPDEDGPPKMLQAAQDAIAGG-VN----QYPPGPGSA----PLRRAIAAQRRRHFGVDYDPETEVLVTVGA 95 (411)
T ss_dssp TTCEESSCSSCSSCCCHHHHHHHHHHHHTT-CC----SCCCTTCCH----HHHHHHHHHHHHHHCCCCCTTTSEEEEEHH
T ss_pred CCeeeccCcCCCCCCCHHHHHHHHHHHhcC-CC----CCCCCCCCH----HHHHHHHHHHHHHcCCCCCCCceEEEeCCH
Confidence 457899888776 57889999999888651 01 111111112 4555555554 754 334 89999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC---CCCCHHHHHHhcccCceEEEEc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~---~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
++|+..++.++ +++||+|++.+|+|++.. ..++..|.+++.++.+++ +.+|+++|++++++++++|+++
T Consensus 96 ~~al~~~~~~~----~~~gd~Vl~~~~~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~ 167 (411)
T 2o0r_A 96 TEAIAAAVLGL----VEPGSEVLLIEPFYDSYS----PVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIIN 167 (411)
T ss_dssp HHHHHHHHHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEE
T ss_pred HHHHHHHHHHh----cCCCCEEEEeCCCcHhHH----HHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEe
Confidence 99999999998 789999999999999854 345667999999998753 5689999999999899999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCC-CCccEEEecCcCcCCCCc--ceEEEE
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+++||||.++| +++|.++|++||+++|+|++|+.+.. ++ .+.. .+.|++++|+||.+|++| +|++++
T Consensus 168 ~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 247 (411)
T 2o0r_A 168 SPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACG 247 (411)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEEC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEee
Confidence 99999999998 58999999999999999999985432 11 2221 467999999999999888 999999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+.+.... ...+.+....+++..+++... ..++.++++..++.+++.+.|.+
T Consensus 248 ~~~~~~~l~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~ 305 (411)
T 2o0r_A 248 PAELIAGVRAAKQY---------------------LSYVGGAPFQPAVALALDTED-AWVAALRNSLRARRDRLAAGLTE 305 (411)
T ss_dssp CHHHHHHHHHHHHH---------------------HTSCCCTTHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh---------------------ccCCCChHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887766533210 011334445566666776442 24678888899999999999987
Q ss_pred h
Q 017640 363 R 363 (368)
Q Consensus 363 ~ 363 (368)
.
T Consensus 306 ~ 306 (411)
T 2o0r_A 306 I 306 (411)
T ss_dssp H
T ss_pred c
Confidence 5
No 63
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=2.4e-27 Score=223.49 Aligned_cols=252 Identities=14% Similarity=0.171 Sum_probs=197.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC-
Q 017640 104 FLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG- 182 (368)
Q Consensus 104 ~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g- 182 (368)
..+..+.+..+++++.+++++|.+ +.++||+|+|+|++.++..+ ++||+|++.+++|++.. +...++..|
T Consensus 28 h~~~~~~~~~~~~~~~l~~~~~~~--~~v~~~~sgt~a~~~~~~~~-----~~gd~vi~~~~~~~~~~--~~~~~~~~g~ 98 (379)
T 3ke3_A 28 HMSKAFQEVMNDLLSNLKTVYNAE--AAVIIPGSGTYGMEAVARQL-----TIDEDCLIIRNGWFSYR--WTQILEKGKF 98 (379)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHTCS--EEEEEESCHHHHHHHHHHHH-----CTTCEEEEEECSHHHHH--HHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCC--CEEEEcCChhHHHHHHHHhC-----CCCCeEEEEeCCchhHH--HHHHHHHhCC
Confidence 345566788889999999999987 48899999999999998654 58999999999998753 445556666
Q ss_pred -CEEEEEeCCCC---------CCCCHHHHHHhcc-cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCc
Q 017640 183 -ANLKFLNLNDD---------ESPDLDKLKEMLS-RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 183 -~~v~~v~~~~~---------~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~ 248 (368)
.+++.++.+.+ +.+|++++++++. +++++|++++++|+||.+.| +++|.++|++||+++++|++|+
T Consensus 99 ~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~ 178 (379)
T 3ke3_A 99 AKSSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS 178 (379)
T ss_dssp SSEEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCceEEEeccccccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc
Confidence 47888886532 2579999999995 48999999999999999999 9999999999999999999999
Q ss_pred CCcccccCCCCCccEEEecCcCcC-CCCcceEEEEcccccccCCCcccCCcceee-cccC-CCCCCCCCCCCCCCCCCHH
Q 017640 249 VPHMVVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPPFLGGGEMISD-VFLD-HSTFADPPSRFEAGTPAIG 325 (368)
Q Consensus 249 ~~~~~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~~~~g~~~~~~-~~~~-~~~~~~~~~~~~~gt~~~~ 325 (368)
|..++++..+++|++++|+||++ ||+|+|++++++++++.+.+.......... .+.. ...+... .+...+|+++.
T Consensus 179 -g~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~t~~~~ 256 (379)
T 3ke3_A 179 -GCVWLDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENG-GHAYHATMPTD 256 (379)
T ss_dssp -TTCCCCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTT-SCCCSSCCCHH
T ss_pred -CCccccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhcc-CCCCCCCCCHH
Confidence 88877777778999999999965 577899999999988776543211100000 0000 0000000 11123599999
Q ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 326 EAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 326 ~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.++++.++++++.+.|++.++++..++++++.+.|.++ |++
T Consensus 257 ~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~ 297 (379)
T 3ke3_A 257 SLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIE 297 (379)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCE
Confidence 99999999999999899999999999999999999876 543
No 64
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-27 Score=229.69 Aligned_cols=269 Identities=20% Similarity=0.163 Sum_probs=210.3
Q ss_pred CcHHHHHHHHHHHHHhhc-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHHHHHHHccCCC-CC
Q 017640 79 KPIAVLKALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAINLVAYSWGLSN-LK 155 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~-~~ 155 (368)
.++.+.+++.+.+..+.. ++. .+.......+..+++++++++++|.+ ..+++++++|+++|+.+++.++.... -+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~ 153 (497)
T 3mc6_A 76 GGDDLIHLQTIAYEKYCVANQL--HPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHH 153 (497)
T ss_dssp CCHHHHHHHHHHHHHTSSCBTT--CTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhhcCCC--CcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhc
Confidence 457788888887776422 222 22333456788889999999999998 34589999999999999999872100 00
Q ss_pred CC---CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHH
Q 017640 156 SG---DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIV 231 (368)
Q Consensus 156 ~g---d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~ 231 (368)
+| ++|+++.+.|++ +...++..|++++.|++++ ++.+|+++|++++++++++|++++++||||.+.|+++|.
T Consensus 154 ~g~~~~~Vi~~~~~h~~----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~ 229 (497)
T 3mc6_A 154 RGITEPEIIAPVTAHAG----FDKAAYYFGMKLRHVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLG 229 (497)
T ss_dssp SCCSSCEEEEETTSCHH----HHHHHHHSCCEEEEECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTT
T ss_pred CCCCCceEEEeCCccHH----HHHHHHHcCCeEEEEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHH
Confidence 34 899999999888 4455667799999999987 789999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCcCCc-----------c-cccCCCCCccEEEecCcCc-CCCCcceEEEEcccccccCCCcc----
Q 017640 232 HWSHDVGAKVLVDACQSVPH-----------M-VVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSDLLSAMPPFL---- 294 (368)
Q Consensus 232 ~l~~~~g~~li~D~a~~~~~-----------~-~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~li~~l~~~~---- 294 (368)
++|++||+++|+|++|+.+. . +++....+.|++++|+||+ +++.|+|+++++++.+.......
T Consensus 230 ~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~ 309 (497)
T 3mc6_A 230 KIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAW 309 (497)
T ss_dssp THHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTC
T ss_pred HHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccc
Confidence 99999999999999998322 2 3455556799999999996 58888999999887665443221
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-hcCCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE-RHNTT 367 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~g~t 367 (368)
.++.. ......|+.+...++++.++++.+...|++.+.++..++++++.+.|.+ ++|++
T Consensus 310 ~~~~~--------------~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~ 369 (497)
T 3mc6_A 310 TGGLY--------------GSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLD 369 (497)
T ss_dssp TTSCB--------------CCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCE
T ss_pred cCCCc--------------CCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 11100 0111256777788889999999998888999999999999999999999 57754
No 65
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.9e-27 Score=229.17 Aligned_cols=263 Identities=17% Similarity=0.164 Sum_probs=199.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t 139 (368)
+++++|..+... ++|+.+.+++.+.+....... +.. .....++|+++++++ |.+ ++++|++|+|++
T Consensus 57 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~----Y~~----~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~ 128 (447)
T 3b46_A 57 RELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQ----YSP----TRGRPSLINSLIKLYSPIYNTELKAENVTVTTGAN 128 (447)
T ss_dssp SCCEECCCCSCSSCCCHHHHHHHHHHTTSGGGGS----CCC----TTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhCcCCCC----CCC----CCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHH
Confidence 678899888765 568899999988876411110 111 111225666666665 543 224899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC------------CCCCCHHHHHHhccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND------------DESPDLDKLKEMLSR 207 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~------------~~~~d~~~l~~~l~~ 207 (368)
+|+..++.++ +++||+|++.+|.|++.. ..++..|++++.++.++ ++.+|+++|++++++
T Consensus 129 ~al~~~~~~l----~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 200 (447)
T 3b46_A 129 EGILSCLMGL----LNAGDEVIVFEPFFDQYI----PNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITS 200 (447)
T ss_dssp HHHHHHHHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCT
T ss_pred HHHHHHHHHH----cCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhcc
Confidence 9999999998 889999999999999844 34566799999999764 357899999999998
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cc-cC--CCCCccEEEecCcCcCCCCc
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VV-DV--QGLDADFLVASSHKMCGPTG 276 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~-~~--~~~~~d~~~~s~~K~~g~~G 276 (368)
++++|++++++||||.++| +++|.++|++||+++|+|++|+.... ++ .+ ...+.++++.|+||.+|++|
T Consensus 201 ~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G 280 (447)
T 3b46_A 201 KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATG 280 (447)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTT
T ss_pred CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcc
Confidence 9999999999999999987 88999999999999999999985221 12 12 12468999999999999888
Q ss_pred --ceEEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Q 017640 277 --IGFLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQKIHAYEVKW 352 (368)
Q Consensus 277 --~G~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~~i~~~~~~l 352 (368)
+||+++ ++++++.+..... ....+.+.....++..+++..... .++.++++.+++
T Consensus 281 ~riG~~~~~~~~l~~~l~~~~~---------------------~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~ 339 (447)
T 3b46_A 281 WRIGWVLSLNAELLSYAAKAHT---------------------RICFASPSPLQEACANSINDALKIGYFEKMRQEYINK 339 (447)
T ss_dssp SCCEEEECSCHHHHHHHHHHHH---------------------HHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred hhhEEEEeCCHHHHHHHHHHHh---------------------hccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHH
Confidence 999999 8888776653221 012256777777788888765322 367888999999
Q ss_pred HHHHHHHHHhhcCC
Q 017640 353 IICSIIVIQERHNT 366 (368)
Q Consensus 353 ~~~l~~~l~~~~g~ 366 (368)
.+++.+.|.+. |+
T Consensus 340 ~~~l~~~L~~~-g~ 352 (447)
T 3b46_A 340 FKIFTSIFDEL-GL 352 (447)
T ss_dssp HHHHHHHHHHH-TC
T ss_pred HHHHHHHHHHC-CC
Confidence 99999999876 54
No 66
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=8.4e-28 Score=228.57 Aligned_cols=260 Identities=15% Similarity=0.155 Sum_probs=195.9
Q ss_pred CCeEEeccCCC---C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEe
Q 017640 66 KKLVYLDNAAT---S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFT 135 (368)
Q Consensus 66 ~~~i~l~~~~~---~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t 135 (368)
+++++|+.+.+ . +.++.+.+++.+.+.... . .+.. .....++|+.+++++ | .++ ++|++|
T Consensus 38 ~~~i~l~~~~~~~~~~~~~~~v~~a~~~~~~~~~-~----~y~~----~~g~~~l~~~la~~l~~~~g~~~~~-~~v~~t 107 (406)
T 1xi9_A 38 IKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGH-N----YYGD----SEGLPELRKAIVEREKRKNGVDITP-DDVRVT 107 (406)
T ss_dssp CCCEECCCCCGGGTTCCCCHHHHHHHHHHHHTTC-C----SCCC----TTCCHHHHHHHHHHHHHHHCCCCCG-GGEEEE
T ss_pred CCEEEecCCCCCcCCCCCCHHHHHHHHHHHhcCC-C----CCCC----CCCcHHHHHHHHHHHHHhcCCCCCH-HHEEEc
Confidence 57889999887 4 567899999988876421 0 0111 111235666666665 3 333 499999
Q ss_pred CCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEE
Q 017640 136 KNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~ 213 (368)
+|+++|+..++.++ +++||+|++.+|+|++. ...++..|++++.++.++ ++.+|+++|++++++++++|+
T Consensus 108 ~g~~~al~~~~~~l----~~~gd~Vl~~~~~~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~ 179 (406)
T 1xi9_A 108 AAVTEALQLIFGAL----LDPGDEILVPGPSYPPY----TGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIA 179 (406)
T ss_dssp SHHHHHHHHHHHHH----CCTTCEEEEEESCCHHH----HHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCTTEEEEE
T ss_pred CChHHHHHHHHHHh----CCCCCEEEEcCCCCccH----HHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCcCceEEE
Confidence 99999999999998 78999999999998874 444566799999999874 456899999999998999999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccCCC--CCc-cEEEecCcCcCCCCc--ceEEE-
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQG--LDA-DFLVASSHKMCGPTG--IGFLF- 281 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~~--~~~-d~~~~s~~K~~g~~G--~G~l~- 281 (368)
+++++||||.++| +++|.++|++||+++|+|++|+.+.. ...+.. .+. +++++|+||.+|++| +|+++
T Consensus 180 i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (406)
T 1xi9_A 180 VINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYF 259 (406)
T ss_dssp EESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCGGGCCEEEEE
T ss_pred EECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCCccEEEEEEE
Confidence 9999999999998 89999999999999999999986432 111111 356 899999999999888 89999
Q ss_pred -Ecc----cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 282 -GKS----DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 282 -~~~----~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
.++ ++++.+..... +. ++.+.....++..+++...+ .++.++++..++.+++
T Consensus 260 ~~~~~~~~~l~~~l~~~~~---------------------~~-~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l 316 (406)
T 1xi9_A 260 VDPENKLSEVREAIDRLAR---------------------IR-LCPNTPAQFAAIAGLTGPMD-YLKEYMKKLKERRDYI 316 (406)
T ss_dssp ECTTCTTHHHHHHHHHHHH---------------------HT-CCSCSHHHHHHHHHHHSCCH-HHHHHHHHHHHHHHHH
T ss_pred ecCchhHHHHHHHHHHHHH---------------------hh-cCCCHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHH
Confidence 888 77766553221 01 25566666777777753222 2678888899999999
Q ss_pred HHHHHhhcCC
Q 017640 357 IIVIQERHNT 366 (368)
Q Consensus 357 ~~~l~~~~g~ 366 (368)
.+.|.+++|+
T Consensus 317 ~~~L~~~~~~ 326 (406)
T 1xi9_A 317 YKRLNEIPGI 326 (406)
T ss_dssp HHHHHTSTTE
T ss_pred HHHHHhCCCC
Confidence 9999887554
No 67
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.9e-27 Score=226.59 Aligned_cols=264 Identities=16% Similarity=0.152 Sum_probs=195.7
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CC-CcEEEeCC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DS-GEIVFTKN 137 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~-~~v~~t~g 137 (368)
++++++|+.+... ..++.+.+++.+.+...... .+. ......++|+.+++++ |.+ .+ ++|++|+|
T Consensus 36 g~~~idl~~g~~~~~~~~~v~~a~~~~~~~~~~~----~y~----~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g 107 (412)
T 2x5d_A 36 GEDIIDLSMGNPDGPTPPHIVEKLCTVAQREDTH----GYS----TSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIG 107 (412)
T ss_dssp TCCCEECSSCCCCSCCCHHHHHHHHHTC-----------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESC
T ss_pred CCCEEecCCCCCCCCCCHHHHHHHHHHHhCCCCC----CCC----CCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCC
Confidence 3567899888766 46888999888776542100 010 0112346777777777 863 22 49999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
+++++..++.++ +++||+|++.+|+|++... .++..|++++.++.+++ +.+|+++|++++++++++|+++
T Consensus 108 ~~~a~~~~~~~~----~~~gd~Vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~ 179 (412)
T 2x5d_A 108 SKEGLAHLMLAT----LDHGDTILVPNPSYPIHIY----GAVIAGAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILG 179 (412)
T ss_dssp HHHHHHHHHHHH----CCTTCEEEEEESCCHHHHH----HHHHHTCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEE
T ss_pred hHHHHHHHHHHh----CCCCCEEEEcCCCchhHHH----HHHHcCCEEEEeecCCccCCCCCHHHHHHhcccCceEEEEC
Confidence 999999999998 7899999999999988544 34556999999998764 3378999999998889999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cc---cCCC-CCccEEEecCcCcCCCCc--ceEEEE
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VV---DVQG-LDADFLVASSHKMCGPTG--IGFLFG 282 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~---~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~ 282 (368)
+++||||.++| +++|.++|++||+++|+|++|+.+.. .. .+.. .+.+++++|+||.+|++| +|++++
T Consensus 180 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 259 (412)
T 2x5d_A 180 FPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVG 259 (412)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEE
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEc
Confidence 99999999998 68899999999999999999986432 11 2221 357899999999998777 899999
Q ss_pred cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 283 KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 283 ~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
++++++.+...... ..++.+.....++..+++...+ .++.++++..++.+++.+.|.+
T Consensus 260 ~~~~~~~l~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 317 (412)
T 2x5d_A 260 NPELVSALARIKSY---------------------HDYGTFTPLQVAAIAALEGDQQ-CVRDIARQYQQRRDVLVKGLRE 317 (412)
T ss_dssp CHHHHHHHHHHHHH---------------------HCCCCCHHHHHHHHHHHHSCSH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh---------------------hccCCCHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99888776543211 1235677777777666664322 3677888889999999999987
Q ss_pred hcCCC
Q 017640 363 RHNTT 367 (368)
Q Consensus 363 ~~g~t 367 (368)
. |++
T Consensus 318 ~-g~~ 321 (412)
T 2x5d_A 318 A-GWM 321 (412)
T ss_dssp H-TCC
T ss_pred C-CCE
Confidence 6 543
No 68
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.95 E-value=2.4e-27 Score=224.24 Aligned_cols=255 Identities=14% Similarity=0.138 Sum_probs=193.0
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKN 137 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t~g 137 (368)
++++++|+.+... +.++.+.+++.+.+.... .++.......++|+.+++++ | .++ ++|++|+|
T Consensus 30 g~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~---------~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~v~~t~g 99 (391)
T 3h14_A 30 GRRIIHMEVGQPGTGAPRGAVEALAKSLETDA---------LGYTVALGLPALRQRIARLYGEWYGVDLDP-GRVVITPG 99 (391)
T ss_dssp TCCCEECCCSSCSSCSCHHHHHHHHHHHC-------------------CCHHHHHHHHHHHHHHHCCCCCG-GGEEEESS
T ss_pred CCCeEEccCCCCCCCCCHHHHHHHHHHHhcCC---------CCCCCCCChHHHHHHHHHHHHHHhCCCCCH-HHEEEecC
Confidence 3678999998877 558889999888775310 01111122346666666666 4 344 49999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
+++|+..++.++ +++||+|++.+|+|++.. ..++..|++++.++++++ +.+|+++|+++ ++++|+++
T Consensus 100 ~~~al~~~~~~l----~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~ 168 (391)
T 3h14_A 100 SSGGFLLAFTAL----FDSGDRVGIGAPGYPSYR----QILRALGLVPVDLPTAPENRLQPVPADFAGL---DLAGLMVA 168 (391)
T ss_dssp HHHHHHHHHHHH----CCTTCEEEEEESCCHHHH----HHHHHTTCEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEE
T ss_pred hHHHHHHHHHHh----cCCCCEEEEcCCCCccHH----HHHHHcCCEEEEeecCcccCCCCCHHHHHhc---CCeEEEEC
Confidence 999999999998 889999999999888754 445667999999999854 57799999877 78999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccCCC-CCccEEEecCcCcCCCCc--ceEEEEcccc
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQG-LDADFLVASSHKMCGPTG--IGFLFGKSDL 286 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~~l 286 (368)
+++||||.++| +++|.++|++||+++|+|++|+.... +..... .+.+++++|+||.+|++| +|++++++++
T Consensus 169 ~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 248 (391)
T 3h14_A 169 SPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVGWMVVPEDQ 248 (391)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCEEEECCGGG
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeEEEEeCHHH
Confidence 99999999999 88999999999999999999984321 122211 356789999999998777 8999999998
Q ss_pred cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 287 LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 287 i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++.+...... ..++++.....++.++++ ....++.++++..++.+++.+.|.+.
T Consensus 249 ~~~~~~~~~~---------------------~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~ 302 (391)
T 3h14_A 249 VRVVERIAQN---------------------MFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA 302 (391)
T ss_dssp HHHHHHHHHH---------------------TTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhh---------------------hccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8776543321 123677777777777776 23347788888999999999999876
No 69
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.95 E-value=1.4e-26 Score=217.26 Aligned_cols=254 Identities=10% Similarity=0.066 Sum_probs=195.5
Q ss_pred EEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH------cCCCCCCcEEEeCCHHHH
Q 017640 69 VYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF------INASDSGEIVFTKNATEA 141 (368)
Q Consensus 69 i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~------~~~~~~~~v~~t~g~t~a 141 (368)
++|+.+.+. +.++.+.+++.+.+.......+ .+... .. .++|+.++++ ++.++ ++|++|+|++++
T Consensus 33 idl~~~~~~~~~~~~v~~a~~~~~~~~~~~~~--~y~~~----~~-~~l~~~la~~l~~~~g~~~~~-~~v~~~~G~~~a 104 (369)
T 3cq5_A 33 IRLNTNENPYPPSEALVADLVATVDKIATELN--RYPER----DA-VELRDELAAYITKQTGVAVTR-DNLWAANGSNEI 104 (369)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHHHHHGGGTT--SCCCT----TC-HHHHHHHHHHHHHHHCCCCCG-GGEEEESHHHHH
T ss_pred eeccCCCCCCCCCHHHHHHHHHHHHhcccccc--cCCCc----cH-HHHHHHHHHhhhhcccCCCCh-HhEEECCChHHH
Confidence 788888765 5789999999988876311111 11111 11 2566677776 34444 489999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNM 220 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~ 220 (368)
+..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++++.+|+++|++++++ ++++|++++++||
T Consensus 105 l~~~~~~l----~~~gd~Vl~~~~~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~np 176 (369)
T 3cq5_A 105 LQQLLQAF----GGPGRTALGFQPSYSMHP----ILAKGTHTEFIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNP 176 (369)
T ss_dssp HHHHHHHH----CSTTCEEEEEESSCTHHH----HHHHHTTCEEEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTT
T ss_pred HHHHHHHh----cCCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCC
Confidence 99999998 789999999999998854 34566799999999887778999999999987 8999999999999
Q ss_pred cccccCHHHHHHHHHhcCCEEEEecCCcCCccc---ccC-CCCC-ccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHMV---VDV-QGLD-ADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---~~~-~~~~-~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
||.++|++++.++|+.+++++|+|++|+.+... +.. +..+ .+++++|+||.+|++| +|++++++++++.+.+.
T Consensus 177 tG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~ 256 (369)
T 3cq5_A 177 TGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLV 256 (369)
T ss_dssp TCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHc
Confidence 999999999999999999999999999855421 222 2335 6799999999998777 79999999887766543
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.. ..+++.....++..+++... .++.++++..++.+++.+.|.+.
T Consensus 257 ~~-----------------------~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~ 301 (369)
T 3cq5_A 257 RL-----------------------PYHLSALSQAAAIVALRHSA--DTLGTVEKLSVERVRVAARLEEL 301 (369)
T ss_dssp SC-----------------------TTCSCHHHHHHHHHHHHTHH--HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred CC-----------------------CCCCCHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHhC
Confidence 21 11467777777777776422 35777888888999999888763
No 70
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.95 E-value=4.8e-27 Score=221.53 Aligned_cols=259 Identities=15% Similarity=0.134 Sum_probs=194.1
Q ss_pred CeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 67 KLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 67 ~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.++.|..+.+ + ++++.+.+++.+.+..+........+. .+..+...++|+.+++++|.+ +.++++++++++..
T Consensus 40 ~~id~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~--~g~~~~~~~l~~~la~~~g~~---~~i~~~sGt~a~~~ 114 (384)
T 1bs0_A 40 QYLNFSSNDYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHV--SGYSVVHQALEEELAEWLGYS---RALLFISGFAANQA 114 (384)
T ss_dssp EEEECSCCCTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTT--TCCCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHH
T ss_pred eEEEeeccCccCCCCCHHHHHHHHHHHHHhCCCCCCcCcc--cCChHHHHHHHHHHHHHhCCC---cEEEeCCcHHHHHH
Confidence 3444544443 5 578999999999887642211101111 112356778999999999985 45555566899999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccC---ceEEEEccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRK---TKLVVIHHISNML 221 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~n~t 221 (368)
++.++ +++||.|++.++.|.+... .++..|++++.+|.. |+++|++++++. +++|++++++|||
T Consensus 115 ~~~~~----~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~v~~~~~~npt 181 (384)
T 1bs0_A 115 VIAAM----MAKEDRIAADRLSHASLLE----AASLSPSQLRRFAHN-----DVTHLARLLASPCPGQQMVVTEGVFSMD 181 (384)
T ss_dssp HHHHH----CCTTCEEEEETTCCHHHHH----HHHTSSSEEEEECTT-----CHHHHHHHHHSCCSSCEEEEEESBCTTT
T ss_pred HHHHh----CCCCcEEEEcccccHHHHH----HHHHcCCCEEEeCCC-----CHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 99988 8899999999999887543 345569999999853 899999988753 7899999999999
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCccc------ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCccc
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHMV------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~ 295 (368)
|.++|+++|.++|++||+++|+|++|+.+... .+....++|++++|+||.+|++| |++++++++++.+.+...
T Consensus 182 G~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~~~~ 260 (384)
T 1bs0_A 182 GDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVLCSSTVADYLLQFAR 260 (384)
T ss_dssp CCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEEECHHHHHHHHHHCH
T ss_pred CCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC-cEEEeCHHHHHHHHHhch
Confidence 99999999999999999999999999866431 11112358999999999999888 999999988776553211
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++ . ..++++.....++..+++.+.+...+.++++..++.+++.+.|.+.
T Consensus 261 ~~------------------~-~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (384)
T 1bs0_A 261 HL------------------I-YSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL 309 (384)
T ss_dssp HH------------------H-SSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hh------------------h-cCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc
Confidence 00 0 0125778888888888888763235678899999999999999875
No 71
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.95 E-value=1.9e-27 Score=226.22 Aligned_cols=259 Identities=17% Similarity=0.114 Sum_probs=195.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHh--hccCCCCcchhhHHHHHHHHHHHHHHHHHcC------CCCCCcEEEeC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAY--NSNVHRGIHFLSAKATDEYELARKKVAAFIN------ASDSGEIVFTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~~t~ 136 (368)
+++++|+.+... ++++.+.+++.+.+... ..++.. ....++|+.++++++ .++.++|++|+
T Consensus 23 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~----------~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~ 92 (410)
T 3e2y_A 23 PSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRG----------FGHPALVKALSCLYGKIYQRQIDPNEEILVAV 92 (410)
T ss_dssp TTSEECSSCCCCSCCCHHHHHHHHHHHTCGGGGSCCCT----------TCCHHHHHHHHHHHHHHHTSCCCTTTSEEEES
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCccccCCCCC----------CChHHHHHHHHHHHHHHhCCCCCCCCCEEEeC
Confidence 578999999877 67899999999887642 111110 112256666666655 33425999999
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-----------CCCCCCHHHHHHhc
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-----------DDESPDLDKLKEML 205 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-----------~~~~~d~~~l~~~l 205 (368)
|+++++..++.++ +++||+|++..|.|++.. ..++..|.+++.++++ .++.+|+++|++++
T Consensus 93 g~~~a~~~~~~~~----~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~ 164 (410)
T 3e2y_A 93 GAYGSLFNSIQGL----VDPGDEVIIMVPFYDCYE----PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKF 164 (410)
T ss_dssp HHHHHHHHHHHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTC
T ss_pred CcHHHHHHHHHHh----cCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhc
Confidence 9999999999998 889999999999998854 4456679999999986 24568999999999
Q ss_pred ccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----ccccC---C-CCCccEEEecCcCcCCC
Q 017640 206 SRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----MVVDV---Q-GLDADFLVASSHKMCGP 274 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~~~~~---~-~~~~d~~~~s~~K~~g~ 274 (368)
++++++|++++++||||.++| +++|.++|++||+++|+|++|+... ...++ . ..+.++++.|+||.+|+
T Consensus 165 ~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~ 244 (410)
T 3e2y_A 165 SSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSV 244 (410)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSC
T ss_pred CCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCC
Confidence 989999999999999999985 8899999999999999999998422 11111 1 22466899999999997
Q ss_pred Cc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------HHhCHHHHH
Q 017640 275 TG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL------STIGMQKIH 346 (368)
Q Consensus 275 ~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~------~~~g~~~i~ 346 (368)
+| +|++++++++++.+...... ...+.+.....++..+++.. ....++.++
T Consensus 245 ~G~r~G~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 303 (410)
T 3e2y_A 245 TGWKLGWSIGPAHLIKHLQTVQQN---------------------SFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLP 303 (410)
T ss_dssp GGGCCEEEECCHHHHHHHHHHHHT---------------------TTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHH
T ss_pred CCceEEEEEECHHHHHHHHHHHHh---------------------hccCCChHHHHHHHHHHHhhhccccchHHHHHHHH
Confidence 77 89999999988776533221 12256777777777776631 112367888
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++..++.+++.+.|+++
T Consensus 304 ~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 304 KELEVKRDRMVRLLNSV 320 (410)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 88899999999999876
No 72
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.95 E-value=6.3e-27 Score=218.72 Aligned_cols=252 Identities=12% Similarity=0.158 Sum_probs=197.7
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+++++.|+.+.+. ++++.+.+++.+.+.....++.. ...++|++++++++.+++ +|++|+|+++++.
T Consensus 25 ~~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~-----------~~~~l~~~la~~~~~~~~-~i~~~~g~t~al~ 92 (361)
T 3ftb_A 25 GRELLDYSSNINPLGIPKSFLNNIDEGIKNLGVYPDV-----------NYRRLNKSIENYLKLKDI-GIVLGNGASEIIE 92 (361)
T ss_dssp ---CEETTCCCCTTCSCHHHHTTHHHHHHGGGSCCCT-----------TCHHHHHHHHHHHTCCSC-EEEEESSHHHHHH
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHHHhcCCCCc-----------cHHHHHHHHHHHhCCCcc-eEEEcCCHHHHHH
Confidence 3678899988666 57899999999988765444332 124899999999998765 9999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
.++.++ |+|++.+|+|++.. ..++..|++++.++.++++.++++++++++++ +++|++++++||||.
T Consensus 93 ~~~~~~--------d~vi~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~l~~-~~~v~i~~p~nptG~ 159 (361)
T 3ftb_A 93 LSISLF--------EKILIIVPSYAEYE----INAKKHGVSVVFSYLDENMCIDYEDIISKIDD-VDSVIIGNPNNPNGG 159 (361)
T ss_dssp HHHTTC--------SEEEEEESCCTHHH----HHHHHTTCEEEEEECCTTSCCCHHHHHHHTTT-CSEEEEETTBTTTTB
T ss_pred HHHHHc--------CcEEEecCChHHHH----HHHHHcCCeEEEeecCcccCCCHHHHHHhccC-CCEEEEeCCCCCCCC
Confidence 998743 89999999998844 44556699999999998878899999999988 999999999999999
Q ss_pred ccC---HHHHHHHHHhcCCEEEEecCCcCCcc-----cccC-CCCCccEEEecCcCcCCCCc--ceEEE-EcccccccCC
Q 017640 224 ILP---IEEIVHWSHDVGAKVLVDACQSVPHM-----VVDV-QGLDADFLVASSHKMCGPTG--IGFLF-GKSDLLSAMP 291 (368)
Q Consensus 224 ~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~-~~~~li~~l~ 291 (368)
++| +++|+++|++||+++|+|++|+.... .... ...+.++++.|+||.+|++| +|+++ .++++++.++
T Consensus 160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~ 239 (361)
T 3ftb_A 160 LINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIK 239 (361)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHH
Confidence 998 66788888899999999999983322 1111 22345688899999998777 79988 7777777665
Q ss_pred CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 292 PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 292 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.... ..+++.....++..+++. ...++.++++..++.+++.+.|.+++++
T Consensus 240 ~~~~-----------------------~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 289 (361)
T 3ftb_A 240 AKQN-----------------------PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFI 289 (361)
T ss_dssp TTSC-----------------------TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSE
T ss_pred hhCC-----------------------CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3321 236788888888888774 2346788899999999999999887664
No 73
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.95 E-value=4.2e-27 Score=225.28 Aligned_cols=263 Identities=17% Similarity=0.158 Sum_probs=197.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH----cCCC-CCC-cEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF----INAS-DSG-EIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~~~~-~~~-~v~~t~g~ 138 (368)
+++++|+.+... .+++.+.+++.+.+....... ..+... ....++|+.++++ +|.+ ..+ +|++|+|+
T Consensus 37 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~--~~y~~~----~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~ 110 (429)
T 1yiz_A 37 YKPLNLGQGFPDYHAPKYALNALAAAANSPDPLA--NQYTRG----FGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGA 110 (429)
T ss_dssp HCCEECCSSSCSSCCCHHHHHHHHHHHTCSCGGG--GSCCCS----SCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHH
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHHhccccCc--cCCCCC----CCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecCh
Confidence 467899998776 578899999988876421000 001100 1122455555555 4754 345 89999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC----------CCCCCHHHHHHhcccC
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----------DESPDLDKLKEMLSRK 208 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~----------~~~~d~~~l~~~l~~~ 208 (368)
++|+..++.++ +++||+|++.+|.|++... .++..|.+++.++.++ ++.+|+++|+++++++
T Consensus 111 ~~a~~~~~~~~----~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 182 (429)
T 1yiz_A 111 YEALYATIQGH----VDEGDEVIIIEPFFDCYEP----MVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK 182 (429)
T ss_dssp HHHHHHHHHHH----CCTTCEEEEEESCCTTHHH----HHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT
T ss_pred HHHHHHHHHHh----cCCCCEEEEcCCCchhHHH----HHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccC
Confidence 99999999998 7899999999999998543 3456799999999875 3578999999999888
Q ss_pred ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc------ccc-cCC-CCCccEEEecCcCcCCCCc-
Q 017640 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH------MVV-DVQ-GLDADFLVASSHKMCGPTG- 276 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~------~~~-~~~-~~~~d~~~~s~~K~~g~~G- 276 (368)
+++|++++++||||.++| +++|.++|++||+++|+|++|+... .++ .+. ..+.|+++.|+||.+|++|
T Consensus 183 ~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 262 (429)
T 1yiz_A 183 TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGW 262 (429)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCc
Confidence 999999999999999997 8899999999999999999998421 122 232 3468999999999999888
Q ss_pred -ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-----HH-HhCHHHHHHHH
Q 017640 277 -IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY-----LS-TIGMQKIHAYE 349 (368)
Q Consensus 277 -~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~-----~~-~~g~~~i~~~~ 349 (368)
+|++++++++++.+.+... +..++.+.....++..+++. .. ...++.++++.
T Consensus 263 r~G~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 321 (429)
T 1yiz_A 263 KIGWAYGPEALLKNLQMVHQ---------------------NCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGEL 321 (429)
T ss_dssp CCEEEESCHHHHHHHHHHHH---------------------TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHH
T ss_pred ceEEEEeCHHHHHHHHHHHh---------------------hcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHH
Confidence 9999999988876654321 11235677777777777776 21 11367888889
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
.++.+++.+.|.+.
T Consensus 322 ~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 322 MAKRDYMASFLAEV 335 (429)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999875
No 74
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.95 E-value=1.3e-27 Score=224.95 Aligned_cols=261 Identities=15% Similarity=0.077 Sum_probs=195.8
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCC-cEEEeCC
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSG-EIVFTKN 137 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~-~v~~t~g 137 (368)
+++++.|+.+.+. ..++.+.+++.+.+.... . ..+. ......++|+++++++ |.+ .++ +|++|+|
T Consensus 24 g~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~--~--~~y~----~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g 95 (376)
T 2dou_A 24 GVGLIDLSIGSTDLPPPEAPLKALAEALNDPT--T--YGYC----LKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG 95 (376)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHTTCGG--G--SSCC----CHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred CCCEEeccCCCCCCCCCHHHHHHHHHHHhCCC--c--CCCC----CCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence 3567888888766 467889998887764310 0 1111 1234557777777777 876 223 8999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
+++++..++.++ +++||+|++.+|+|++.. ..++..|++++.++.+.++.+|+++|++++++++++|+++++
T Consensus 96 ~~~a~~~~~~~l----~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 167 (376)
T 2dou_A 96 SQEGLAHLLLAL----TEPEDLLLLPEVAYPSYF----GAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYP 167 (376)
T ss_dssp HHHHHHHHHHHH----CCTTCEEEEESSCCHHHH----HHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSS
T ss_pred cHHHHHHHHHHh----cCCCCEEEECCCCcHhHH----HHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCC
Confidence 999999999998 789999999999888844 445667999999998444568999999988878899999999
Q ss_pred ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---c---ccC-CCCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 218 SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---V---VDV-QGLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 218 ~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~---~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
+||||.++| +++|.++|++||+++|+|++|+.... + ++. +..+.+++++|+||.+|++| +|+++++++
T Consensus 168 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 247 (376)
T 2dou_A 168 NNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSEE 247 (376)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHH
T ss_pred CCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCHH
Confidence 999999998 67899999999999999999985321 1 222 22356799999999998777 799999998
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+......+ ..+.+.....++..+++... ..++.++++..++.+++.+.|.+.
T Consensus 248 ~~~~l~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~ 303 (376)
T 2dou_A 248 ALARLERVKGVI---------------------DFNQYAGVLRMGVEALKTPK-EVVRGYARVYRERALGMAEALKGV 303 (376)
T ss_dssp HHHHHHHHHHHH---------------------CCCSCHHHHHHHHHHHTSCH-HHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhc---------------------ccCCCHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 887765432211 12456677777767766432 236777888888888888888764
No 75
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.95 E-value=2.5e-27 Score=226.29 Aligned_cols=266 Identities=12% Similarity=0.125 Sum_probs=196.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~~v~~t~g~t~a~ 142 (368)
++.++|+.+... ++++.+.+++.+.+..... . ..+....+..+..+.+.+.+.+.+|.+ ++++|++|+|+++++
T Consensus 28 ~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~-~--~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~ 104 (422)
T 3fvs_A 28 HDVVNLGQGFPDFPPPDFAVEAFQHAVSGDFM-L--NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGAL 104 (422)
T ss_dssp SCCEECCCSSCSSCCCHHHHHHHHHHHHSCGG-G--GSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHH
T ss_pred CCceEeCCCCCCCCCCHHHHHHHHHHHhCCCc-c--CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHH
Confidence 567999998877 6789999999988875210 0 001111111333334444444444443 314899999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC------------CCCCCHHHHHHhcccCce
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND------------DESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~------------~~~~d~~~l~~~l~~~~~ 210 (368)
..++.++ +++||+|++.+|+|++.. ..++..|.+++.+++++ ++.+|+++|+++++++++
T Consensus 105 ~~~~~~~----~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~ 176 (422)
T 3fvs_A 105 FTAFQAL----VDEGDEVIIIEPFFDCYE----PMTMMAGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTK 176 (422)
T ss_dssp HHHHHHH----CCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEE
T ss_pred HHHHHHH----cCCCCEEEEcCCCchhhH----HHHHHcCCEEEEEecccccccccccccccCCCCCHHHHHhhcCCCce
Confidence 9999998 899999999999998844 44566799999999876 346899999999999999
Q ss_pred EEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCC----cccccC---C-CCCccEEEecCcCcCCCCc--c
Q 017640 211 LVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP----HMVVDV---Q-GLDADFLVASSHKMCGPTG--I 277 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~----~~~~~~---~-~~~~d~~~~s~~K~~g~~G--~ 277 (368)
+|++++++||||.++| +++|.++|++||+++|+|++|+.. ....++ . ..+.++++.|+||.+|++| +
T Consensus 177 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~ 256 (422)
T 3fvs_A 177 ALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKV 256 (422)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCC
T ss_pred EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceE
Confidence 9999999999999996 889999999999999999999852 211122 1 1356689999999998777 8
Q ss_pred eEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH------HhCHHHHHHHHHH
Q 017640 278 GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS------TIGMQKIHAYEVK 351 (368)
Q Consensus 278 G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~------~~g~~~i~~~~~~ 351 (368)
|++++++++++.+...... ...+.+.....++..+++... ...++.++++..+
T Consensus 257 G~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 315 (422)
T 3fvs_A 257 GWVLGPDHIMKHLRTVHQN---------------------SVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQR 315 (422)
T ss_dssp EEEECCHHHHHHHHHHHHT---------------------TTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHhh---------------------ccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHH
Confidence 9999999888766533221 122567777777777776411 1236788889999
Q ss_pred HHHHHHHHHHhh
Q 017640 352 WIICSIIVIQER 363 (368)
Q Consensus 352 l~~~l~~~l~~~ 363 (368)
+.+++.+.|.++
T Consensus 316 ~~~~l~~~L~~~ 327 (422)
T 3fvs_A 316 CRDHMIRSLQSV 327 (422)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHc
Confidence 999999999876
No 76
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.95 E-value=1.4e-27 Score=227.60 Aligned_cols=266 Identities=18% Similarity=0.175 Sum_probs=199.1
Q ss_pred CCeEEeccCCC-----CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC------------CCC
Q 017640 66 KKLVYLDNAAT-----SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN------------ASD 128 (368)
Q Consensus 66 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------------~~~ 128 (368)
+++++|+.+.. .++++.+.+++.+.+....... +.. .....++|++++++++ .++
T Consensus 33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~----y~~----~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~ 104 (416)
T 1bw0_A 33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNG----YFP----TVGSPEAREAVATWWRNSFVHKEELKSTIVK 104 (416)
T ss_dssp SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSS----CCC----TTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG
T ss_pred CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCC----cCC----CCCCHHHHHHHHHHHHhhhcccccCCCCCCc
Confidence 56799998873 4678999999998876421111 100 1223478888888887 444
Q ss_pred CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcc
Q 017640 129 SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLS 206 (368)
Q Consensus 129 ~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~ 206 (368)
++|++|+|+++++.+++.++ +++||+|++.+|+|++.. ..++..|++++.++++++ +.+|+++|+++++
T Consensus 105 -~~v~~~~g~~~al~~~~~~l----~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 175 (416)
T 1bw0_A 105 -DNVVLCSGGSHGILMAITAI----CDAGDYALVPQPGFPHYE----TVCKAYGIGMHFYNCRPENDWEADLDEIRRLKD 175 (416)
T ss_dssp -GGEEEESHHHHHHHHHHHHH----CCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEEEGGGTTEECHHHHHHHCC
T ss_pred -ceEEEeCChHHHHHHHHHHh----CCCCCEEEEcCCCcHhHH----HHHHHcCcEEEEeecCcccCCCCCHHHHHHHhc
Confidence 49999999999999999998 789999999999998844 445667999999998653 6689999999999
Q ss_pred cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcC----Cc----ccccCC---CCCccEEEecCcCcC
Q 017640 207 RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV----PH----MVVDVQ---GLDADFLVASSHKMC 272 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~----~~----~~~~~~---~~~~d~~~~s~~K~~ 272 (368)
++++++++++++||||.++| +++|.++|++||+++|+|++|+. +. ...++. ..+.+++++|+||.|
T Consensus 176 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 255 (416)
T 1bw0_A 176 DKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNL 255 (416)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTT
T ss_pred cCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchhhC
Confidence 88999999999999999999 89999999999999999999985 22 111222 223467889999998
Q ss_pred CCCc--ceEEEEccc--ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHH
Q 017640 273 GPTG--IGFLFGKSD--LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAY 348 (368)
Q Consensus 273 g~~G--~G~l~~~~~--li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~ 348 (368)
+.+| +|+++++++ +++.+...... .....++++....+++..+++......++.+.++
T Consensus 256 ~~~Glr~G~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 317 (416)
T 1bw0_A 256 VVPGWRLGWLLYVDPHGNGPSFLEGLKR------------------VGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAK 317 (416)
T ss_dssp SCGGGCCEEEEEECTTCSCHHHHHHHHH------------------HHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred CCCCceEEEEEeeCchhhHHHHHHHHHH------------------HhccccCCCcHHHHHHHHHHhcccHHHHHHHHHH
Confidence 8777 899998874 55433311100 0001236777778888777774333457788889
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 017640 349 EVKWIICSIIVIQERHNT 366 (368)
Q Consensus 349 ~~~l~~~l~~~l~~~~g~ 366 (368)
.+++.+++.+.|.+++|+
T Consensus 318 ~~~~~~~l~~~L~~~~g~ 335 (416)
T 1bw0_A 318 IEESAMYLYNHIGECIGL 335 (416)
T ss_dssp HHHHHHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 999999999999876554
No 77
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.95 E-value=1.5e-27 Score=226.43 Aligned_cols=282 Identities=19% Similarity=0.244 Sum_probs=205.1
Q ss_pred hhhcCCCCcccccc-c-CCCCeE-EeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc
Q 017640 49 HITRPDFPILHQEV-Y-GSKKLV-YLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI 124 (368)
Q Consensus 49 ~~~r~~f~~~~~~~-~-~~~~~i-~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~ 124 (368)
..+|++||.+.... + .|++++ |+++...+ +.++.+.+++.+.+..+..+++. +...+...+...++|+.+++++
T Consensus 27 ~~~~~~fp~~~~~~~~~~g~~~i~~~~~~~~~~~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~la~~~ 104 (401)
T 2bwn_A 27 EREKGAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHEALEAVGAGSGG--TRNISGTTAYHRRLEAEIAGLH 104 (401)
T ss_dssp EECTTSTTEEEEECTTSCEEEEEECSCSCTTSGGGCHHHHHHHHHHHHHHCSCCCS--BTTTBCCBHHHHHHHHHHHHHT
T ss_pred hcccccccceecccccCCCCcEEEeeCCCcccCCCCHHHHHHHHHHHHHcCCCCCC--cCcccCChHHHHHHHHHHHHHh
Confidence 34688999774321 0 023333 44433324 24678999999999876554431 1212223456778999999999
Q ss_pred CCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHh
Q 017640 125 NASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 125 ~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 204 (368)
|.+ ++|++++|++ ++..++..+. ...+||+|++..++|++....+ +..|++++.++.+ |+++|++.
T Consensus 105 ~~~--~~i~~~sG~~-a~~~~~~~l~--~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~-----d~~~le~~ 170 (401)
T 2bwn_A 105 QKE--AALVFSSAYN-ANDATLSTLR--VLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHN-----DVAHLREL 170 (401)
T ss_dssp TCS--EEEEESCHHH-HHHHHHHHHH--HHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTT-----CHHHHHHH
T ss_pred CCC--cEEEECCcHH-HHHHHHHHHh--cCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCC-----CHHHHHHH
Confidence 974 4788877765 7777766541 1358999999999999876544 4569999999975 78889888
Q ss_pred cc----cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc-----c-cCCC--CCccEEEecCcCcC
Q 017640 205 LS----RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV-----V-DVQG--LDADFLVASSHKMC 272 (368)
Q Consensus 205 l~----~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~-----~-~~~~--~~~d~~~~s~~K~~ 272 (368)
++ +++++|++++++||||.+.|+++|.++|++||+++|+|++|+.|... + .... .+.|++++|++|.+
T Consensus 171 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~ 250 (401)
T 2bwn_A 171 IAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAY 250 (401)
T ss_dssp HHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTT
T ss_pred HHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhc
Confidence 86 57899999999999999999999999999999999999999955321 0 1111 13689999999999
Q ss_pred CCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 273 GPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 273 g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
|.+| |+++.++++++.+.....+ .++..++++ ..++++..+++++.+.|++.++++..++
T Consensus 251 ~~~G-G~~~~~~~~~~~l~~~~~~------------------~~~~~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~~~ 310 (401)
T 2bwn_A 251 GVFG-GYIAASARMVDAVRSYAPG------------------FIFSTSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQMH 310 (401)
T ss_dssp CSCC-EEEEECHHHHHHHHHHCHH------------------HHTSBCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cCCC-CEEecCHHHHHHHHHhCcC------------------ceecCCCCH-HHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 9877 9999988877654421110 123344555 7778888899988776778999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 017640 353 IICSIIVIQERHNTT 367 (368)
Q Consensus 353 ~~~l~~~l~~~~g~t 367 (368)
.+++.+.|.+. |++
T Consensus 311 ~~~l~~~L~~~-g~~ 324 (401)
T 2bwn_A 311 AKVLKMRLKAL-GMP 324 (401)
T ss_dssp HHHHHHHHHHH-TCC
T ss_pred HHHHHHHHHHC-CCc
Confidence 99999999887 654
No 78
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.95 E-value=3.3e-27 Score=225.62 Aligned_cols=265 Identities=13% Similarity=0.069 Sum_probs=203.1
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~ 143 (368)
++++.|..+... +.++.+.+++.+.+.... . .++....+..+++++.+++.++.+ ..++|++|+|+++|+.
T Consensus 61 ~~~i~~~~~~~~~~~~~~v~~a~~~~~~~~~-~------~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~ 133 (421)
T 3l8a_A 61 PELLQMWVADMDFLPVPEIKEAIINYGREHI-F------GYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAIS 133 (421)
T ss_dssp TTCEECCSSCCCSCCCHHHHHHHHHHHHHCC-S------SCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHH
T ss_pred CCeeecccCCCCCCCCHHHHHHHHHHHhcCC-c------CCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHH
Confidence 567888777655 678999999998887521 0 111111566778888888888843 2248999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CC--CCCCHHHHHHhcc-cCceEEEEccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DD--ESPDLDKLKEMLS-RKTKLVVIHHISN 219 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~--~~~d~~~l~~~l~-~~~~~v~~~~~~n 219 (368)
.++.++ .++||+|++.+|.|++.. ..++..|.+++.+|++ .+ +.+|+++|+++++ +++++|++++++|
T Consensus 134 ~a~~~~----~~~gd~Vi~~~~~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~n 205 (421)
T 3l8a_A 134 IALQAF----SEKGDAVLINSPVYYPFA----RTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHN 205 (421)
T ss_dssp HHHHHH----SCTEEEEEEEESCCHHHH----HHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBT
T ss_pred HHHHHh----cCCCCEEEECCCCcHHHH----HHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCC
Confidence 999998 789999999999988854 3445669999999986 33 4689999999998 7899999999999
Q ss_pred ccccccC---HHHHHHHHHhcCCEEEEecCCcCCc----c--cc-cC--CCCCccEEEecCcCcCCCCc--ceEEEEc-c
Q 017640 220 MLASILP---IEEIVHWSHDVGAKVLVDACQSVPH----M--VV-DV--QGLDADFLVASSHKMCGPTG--IGFLFGK-S 284 (368)
Q Consensus 220 ~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~----~--~~-~~--~~~~~d~~~~s~~K~~g~~G--~G~l~~~-~ 284 (368)
|||.++| +++|.++|++||+++|+|++|+... . ++ .+ +..+.++++.|++|.+|++| +|+++++ +
T Consensus 206 ptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~ 285 (421)
T 3l8a_A 206 PGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE 285 (421)
T ss_dssp TTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH
T ss_pred CCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH
Confidence 9999965 8899999999999999999998421 1 11 11 12356689999999988777 7999998 7
Q ss_pred cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 285 DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 285 ~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
++++.+.+... .+..++++..+++++.++++...+ .++.+.++..++.+++.+.|++.+
T Consensus 286 ~l~~~~~~~~~--------------------~~~~~~~n~~~~~a~~aal~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 344 (421)
T 3l8a_A 286 SLRRKFQYRQL--------------------ANNQHEVPTVGMIATQAAFQYGKP-WLEELKTVIEGNIKLVIKELEAKT 344 (421)
T ss_dssp HHHHHHHHHHH--------------------HTTCSCCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH--------------------hcccCCCCHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77766654331 112347888888888888875433 367888999999999999998876
Q ss_pred CC
Q 017640 365 NT 366 (368)
Q Consensus 365 g~ 366 (368)
++
T Consensus 345 ~i 346 (421)
T 3l8a_A 345 KI 346 (421)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 79
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.95 E-value=4e-27 Score=223.19 Aligned_cols=261 Identities=13% Similarity=0.055 Sum_probs=195.7
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH----cC--CCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF----IN--ASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~----~~--~~~~~~v~~t~g~ 138 (368)
+++++|+.+..+ ++++.+.+++.+.+... .. .+... ..++|+.++++ +| .++ ++|++|+|+
T Consensus 31 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~----~y~~~------~~~l~~~la~~l~~~~g~~~~~-~~v~~t~g~ 98 (399)
T 1c7n_A 31 NEVVPLSVADMEFKNPPELIEGLKKYLDET-VL----GYTGP------TEEYKKTVKKWMKDRHQWDIQT-DWIINTAGV 98 (399)
T ss_dssp TTCCCCCSSSCSSCCCHHHHHHHHHHHHHC-CC----SSBCC------CHHHHHHHHHHHHHHHCCCCCG-GGEEEESSH
T ss_pred CCceeeeecCCCCCCCHHHHHHHHHHHhcC-CC----CCCCC------cHHHHHHHHHHHHHHhCCCCCh-hhEEEcCCH
Confidence 356788887765 56889999998887641 01 11111 23556666655 47 334 489999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CC--CCCCHHHHHHhcc-cCceEEEE
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DD--ESPDLDKLKEMLS-RKTKLVVI 214 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~--~~~d~~~l~~~l~-~~~~~v~~ 214 (368)
++|+..++.++ +++||+|++.+|+|++.. ..++..|++++.++.+ ++ +.+|+++|+++++ +++++|++
T Consensus 99 ~~a~~~~~~~l----~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~ 170 (399)
T 1c7n_A 99 VPAVFNAVREF----TKPGDGVIIITPVYYPFF----MAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLF 170 (399)
T ss_dssp HHHHHHHHHHH----CCTTCEEEECSSCCTHHH----HHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHHHh----cCCCCEEEEcCCCcHhHH----HHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEE
Confidence 99999999998 789999999999998854 3455679999999885 33 3589999999998 68899999
Q ss_pred cccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccCCC-----CCccEEEecCcCcCCCCc--ceEE
Q 017640 215 HHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQG-----LDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 215 ~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~~-----~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++++||||.++| +++|.++|++||+++|+|++|+.... ..++.. .+.++++.|+||.+|++| +|++
T Consensus 171 ~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 250 (399)
T 1c7n_A 171 CSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNI 250 (399)
T ss_dssp ESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEE
T ss_pred cCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEE
Confidence 999999999999 89999999999999999999985321 122221 246789999999998777 7999
Q ss_pred EEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 017640 281 FGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 281 ~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 359 (368)
+++ +++++.+.+.... +..++++.....++..+++... ..++.++++..++.+++.+.
T Consensus 251 ~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~ 309 (399)
T 1c7n_A 251 IIKNPDIRERFTKSRDA--------------------TSGMPFTTLGYKACEICYKECG-KWLDGCIKVIDKNQRIVKDF 309 (399)
T ss_dssp ECCCHHHHHHHHHHHHH--------------------TTCCCCCHHHHHHHHHHHHHCH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHhh--------------------cccCCCCHHHHHHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHH
Confidence 997 4577766543321 1123567777777777776432 24678888899999999999
Q ss_pred HHh-hcCCC
Q 017640 360 IQE-RHNTT 367 (368)
Q Consensus 360 l~~-~~g~t 367 (368)
|.+ ++|++
T Consensus 310 L~~~~~~~~ 318 (399)
T 1c7n_A 310 FEVNHPEIK 318 (399)
T ss_dssp HHHHCTTSB
T ss_pred HHhhCCCCe
Confidence 988 56653
No 80
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.95 E-value=8.1e-27 Score=220.83 Aligned_cols=261 Identities=16% Similarity=0.110 Sum_probs=198.9
Q ss_pred CCeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.++.|..+.+ + +.++.+.+++.+.+..+. .+.. .+...++..+...++++.+++++|.+ +.+++ +++++++.
T Consensus 43 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~~-~~~~~~g~~~~~~~l~~~la~~~~~~--~~i~~-~sGt~a~~ 117 (399)
T 3tqx_A 43 KEVLNFCANNYLGLADHPALIKTAQTVVEQYG-FGMA-SVRFICGTQTIHKELEKDISEFLGTD--DTILY-SSCFDANG 117 (399)
T ss_dssp EEEEECSSCCTTSCTTCHHHHHHHHHHHHHHC-SCCC-SCCCCCCCBHHHHHHHHHHHHHHTCS--EEEEE-SCHHHHHH
T ss_pred eeEEEeeccCcccccCCHHHHHHHHHHHHHhC-CCCC-CcCccccCchHHHHHHHHHHHHHCCC--cEEEE-CchHHHHH
Confidence 34555555543 3 357999999999888743 2111 11111223466778999999999986 24444 55588999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHI 217 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~ 217 (368)
.++.++ +++||.|++..|+|++.. ..++..|.+++.++.. |+++|++.+++ ++++|+++++
T Consensus 118 ~~l~~~----~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~~~v~~~~~ 184 (399)
T 3tqx_A 118 GLFETL----LGPEDAIISDELNHASII----DGIRLCKAQRYRYKNN-----AMGDLEAKLKEADEKGARFKLIATDGV 184 (399)
T ss_dssp TTHHHH----CCTTCEEEEETTCCHHHH----HHHHSCCSEEEEECTT-----CTTHHHHHHHHHHTTTCSSEEEEEESE
T ss_pred HHHHHh----cCCCCEEEECCcccHHHH----HHHHHcCCceeEeCCC-----CHHHHHHHHHhhhccCCCceEEEEeCC
Confidence 999988 899999999999998854 3456679999999864 78888888876 7899999999
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc------cCCC--CCccEEEecCcCcCC-CCcceEEEEcccccc
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV------DVQG--LDADFLVASSHKMCG-PTGIGFLFGKSDLLS 288 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~------~~~~--~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~ 288 (368)
+||||.++|+++|.++|++||+++|+|++|+.+.... +... .++|++++|+||.+| ++| |++++++++++
T Consensus 185 ~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~ 263 (399)
T 3tqx_A 185 FSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKEIIE 263 (399)
T ss_dssp ETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHHHHH
Confidence 9999999999999999999999999999997654321 1111 267999999999887 877 99999999887
Q ss_pred cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 289 AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 289 ~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+......+ . ..++.+...++++..+++... .+.+.++++..++.+++.+.|.+. |+
T Consensus 264 ~~~~~~~~~------------------~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~ 320 (399)
T 3tqx_A 264 WLRNRSRPY------------------L-FSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GF 320 (399)
T ss_dssp HHHHHCHHH------------------H-SSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred HHHHhCcce------------------e-ccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 765432110 1 134788888888888888775 468899999999999999999876 44
No 81
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.95 E-value=1.5e-26 Score=218.71 Aligned_cols=261 Identities=11% Similarity=0.081 Sum_probs=192.9
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHH-HHHHHHHHc----C--CCCCCcEEEeCC
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYEL-ARKKVAAFI----N--ASDSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~la~~~----~--~~~~~~v~~t~g 137 (368)
+++++|+.+..+ .+++.+.+++.+.+... .. .+... ..+ +|+.+++++ | .++ ++|++|+|
T Consensus 28 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-~~----~y~~~------~~~~lr~~la~~l~~~~g~~~~~-~~v~~t~g 95 (390)
T 1d2f_A 28 ADLLPFTISDMDFATAPCIIEALNQRLMHG-VF----GYSRW------KNDEFLAAIAHWFSTQHYTAIDS-QTVVYGPS 95 (390)
T ss_dssp --CEECCSSSCSSCCCHHHHHHHHHHHTTC-CC----CCCCS------CCHHHHHHHHHHHHHHSCCCCCG-GGEEEESC
T ss_pred CCeeEeeecCCCCCCCHHHHHHHHHHHhCC-CC----CCCCC------ChHHHHHHHHHHHHHhcCCCCCH-HHEEEcCC
Confidence 467888887765 57889999998887531 00 11110 224 666666654 6 334 48999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC---CCCCHHHHHHhccc-CceEEE
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD---ESPDLDKLKEMLSR-KTKLVV 213 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~---~~~d~~~l~~~l~~-~~~~v~ 213 (368)
+++++.+++.++ +++||+|++.+|+|++.. ..++..|++++.++.+++ +.+|+++|++++++ ++++|+
T Consensus 96 ~~~al~~~~~~l----~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~ 167 (390)
T 1d2f_A 96 VIYMVSELIRQW----SETGEGVVIHTPAYDAFY----KAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIML 167 (390)
T ss_dssp HHHHHHHHHHHS----SCTTCEEEEEESCCHHHH----HHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEE
T ss_pred HHHHHHHHHHHh----cCCCCEEEEcCCCcHHHH----HHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEE
Confidence 999999999998 789999999999888854 445567999999998643 35899999999986 789999
Q ss_pred EcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccCCCCC---ccEEEecCcCcCCCCc--ceEEE
Q 017640 214 IHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDVQGLD---ADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 214 ~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~~~~---~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+++++||||.++| +++|.++|++||+++|+|++|+.... ..++.... .|. +.|+||.+|++| +|+++
T Consensus 168 l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~ 246 (390)
T 1d2f_A 168 LCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGI 246 (390)
T ss_dssp EESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEE
T ss_pred EeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEE
Confidence 9999999999999 88999999999999999999985321 12222222 266 999999998777 79999
Q ss_pred Ec-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 282 GK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 282 ~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
++ +++++.+.+...| .+..++++.....++..+++...+ .++.++++..++.+++.+.|
T Consensus 247 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~l~~~L 306 (390)
T 1d2f_A 247 IENSSSRDAYLSALKG-------------------RDGLSSPSVLALTAHIAAYQQGAP-WLDALRIYLKDNLTYIADKM 306 (390)
T ss_dssp ECSHHHHHHHHHHHHT-------------------TSCCCSCCHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHhh-------------------hcccCCCCHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 86 5776665533220 111236788888777777775333 36778888999999999999
Q ss_pred Hh-hcCCC
Q 017640 361 QE-RHNTT 367 (368)
Q Consensus 361 ~~-~~g~t 367 (368)
.+ ++|++
T Consensus 307 ~~~~~~~~ 314 (390)
T 1d2f_A 307 NAAFPELN 314 (390)
T ss_dssp HHHCSSCC
T ss_pred HhhCCCCE
Confidence 88 56654
No 82
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.95 E-value=2.1e-26 Score=223.41 Aligned_cols=286 Identities=15% Similarity=0.089 Sum_probs=203.5
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
...++|+ +...+..+.+.+++.+....+ +++ .....+.+..+...++++.+++++|.+. .+++++|+++++..+
T Consensus 66 ~~~~~lg-~~~~~~~p~v~~~~~~~~~~~--~~~-~~~~~~~g~~~l~~~l~~~la~~~g~~~--~~~~~~ggt~a~~~a 139 (474)
T 1wyu_B 66 TTFYPLG-SCTMKYNPKLHEEAARLFADL--HPY-QDPRTAQGALRLMWELGEYLKALTGMDA--ITLEPAAGAHGELTG 139 (474)
T ss_dssp TSCCCBT-TTCCCCCCHHHHHHHHTTSSC--CTT-SCGGGCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHH
T ss_pred cCccccc-cccccCCHHHHHHHHHHHHhc--CCC-CchhhChHHHHHHHHHHHHHHHHHCCCc--eeecChHHHHHHHHH
Confidence 3567888 555555566666665542221 222 1111356678889999999999999873 567889999999986
Q ss_pred HHHccCCCCCCCC-----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccc
Q 017640 146 AYSWGLSNLKSGD-----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 146 ~~~~~~~~~~~gd-----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
+.++.....++|| +|+++++.|+++.. .++..|++++.|+.++++.+|+++|++++++++++|+++++ |+
T Consensus 140 l~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~----~~~~~G~~vv~v~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~ 214 (474)
T 1wyu_B 140 ILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPA----TASMAGYQVREIPSGPEGEVDLEALKRELGPHVAALMLTNP-NT 214 (474)
T ss_dssp HHHHHHHHHHTTCTTTCCEEEEETTSCTHHHH----HHHHTTCEEEEECBCTTSSBCHHHHHHHCSTTEEEEEECSS-CT
T ss_pred HHHHHHHHHhcCCccCCCEEEEeCCcChhhHH----HHHHCCCEEEEecCCCCCCcCHHHHHHhhCCCceEEEEECC-CC
Confidence 6554110124666 99999999988553 35667999999999888999999999999999999999997 68
Q ss_pred cccc-cCHHHHHHHHHhcCCEEEEecCCcCCcc-cccCCCCCccEEEecCcCcCCCC------cceEEEEcccccccCC-
Q 017640 221 LASI-LPIEEIVHWSHDVGAKVLVDACQSVPHM-VVDVQGLDADFLVASSHKMCGPT------GIGFLFGKSDLLSAMP- 291 (368)
Q Consensus 221 tG~~-~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~~~~~~~~d~~~~s~~K~~g~~------G~G~l~~~~~li~~l~- 291 (368)
+|.+ .++++|.++|++||+++|+|++|+.+.. ..+...+++|++++|+||+|+.+ |+|++++++++++.+.
T Consensus 215 ~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~ 294 (474)
T 1wyu_B 215 LGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPV 294 (474)
T ss_dssp TSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCS
T ss_pred CcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCC
Confidence 9998 6899999999999999999999975543 22333457999999999977533 5899999999988876
Q ss_pred Cccc-CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 292 PFLG-GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 292 ~~~~-g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+... ++.. +.. .. .......++..++.+...+.++...++.+...+++.+.++..++++++.+.|.+. |++
T Consensus 295 ~~~~~~g~~--~~~-~~-~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~ 366 (474)
T 1wyu_B 295 PLVERGEEG--FYL-DF-DRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYR 366 (474)
T ss_dssp CEEEECSSC--EEE-EC-CCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCB
T ss_pred CeeeccCCe--eEe-cc-cCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcE
Confidence 3221 1111 000 00 1111123445556666555555555554444567777899999999999999886 654
No 83
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.95 E-value=8.7e-27 Score=220.57 Aligned_cols=262 Identities=16% Similarity=0.149 Sum_probs=197.0
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCC-cEEEeCCHHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSG-EIVFTKNATE 140 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~-~v~~t~g~t~ 140 (368)
+++++.|+.+... +.++.+.+++.+.+.....++... +..+..+.+.+.+.+.+|.+ .++ +|++|+|+++
T Consensus 29 g~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~------g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~ 102 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHPTPKVITDALTASLHELEKYPLTA------GLPELRQACANWLKRRYDGLTVDADNEILPVLGSRE 102 (396)
T ss_dssp TCCCEECSCCSCCSCCCHHHHHHHHHTGGGGGSCCCTT------CCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHH
T ss_pred CCCeEEeCCcCCCCCCCHHHHHHHHHHhhhccCCCCCC------CcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHH
Confidence 4778999998877 578899999988775443333211 11344444555555555753 235 8999999999
Q ss_pred HHHHHHHHccCCCCCCC-----CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEE
Q 017640 141 AINLVAYSWGLSNLKSG-----DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVI 214 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~g-----d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~ 214 (368)
++..++.++ +++| |+|++.+|+|++. ...++..|++++.++++++ +.+|+++|++++++++++|++
T Consensus 103 al~~~~~~~----~~~g~~~~~d~vl~~~p~~~~~----~~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l 174 (396)
T 3jtx_A 103 ALFSFVQTV----LNPVSDGIKPAIVSPNPFYQIY----EGATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFV 174 (396)
T ss_dssp HHHHHHHHH----CCC---CCCCEEEEEESCCHHH----HHHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEE
T ss_pred HHHHHHHHH----hCCCCccCCCEEEEcCCCcHhH----HHHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEE
Confidence 999999998 7786 7999999988874 4455677999999998654 568999999999889999999
Q ss_pred cccccccccccCHH---HHHHHHHhcCCEEEEecCCcCCcc----cccC--------CCCCccEEEecCcCcCCCCc--c
Q 017640 215 HHISNMLASILPIE---EIVHWSHDVGAKVLVDACQSVPHM----VVDV--------QGLDADFLVASSHKMCGPTG--I 277 (368)
Q Consensus 215 ~~~~n~tG~~~~l~---~i~~l~~~~g~~li~D~a~~~~~~----~~~~--------~~~~~d~~~~s~~K~~g~~G--~ 277 (368)
++++||||.++|.+ +|.++|++||+++|+|++|+.... +... ...+.++++.|+||.+|.+| +
T Consensus 175 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 254 (396)
T 3jtx_A 175 CSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRS 254 (396)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCC
T ss_pred ECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccce
Confidence 99999999999954 599999999999999999985321 1111 12567899999999888777 8
Q ss_pred eEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 017640 278 GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSI 357 (368)
Q Consensus 278 G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~ 357 (368)
|+++.++++++.+..... ...++.+.....++..+++. ...++.++++..++.+++.
T Consensus 255 G~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~ 311 (396)
T 3jtx_A 255 GFVAGDAELLKNFLLYRT---------------------YHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEKFERVI 311 (396)
T ss_dssp EEEEECHHHHHHHHHHHH---------------------HHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHh---------------------hcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHH
Confidence 999999988877654321 11236778888877777764 2236777888888888888
Q ss_pred HHHHhh
Q 017640 358 IVIQER 363 (368)
Q Consensus 358 ~~l~~~ 363 (368)
+.|.+.
T Consensus 312 ~~l~~~ 317 (396)
T 3jtx_A 312 PILQQV 317 (396)
T ss_dssp HHHTTT
T ss_pred HHHHhc
Confidence 888765
No 84
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.95 E-value=6.7e-27 Score=219.09 Aligned_cols=254 Identities=12% Similarity=0.088 Sum_probs=194.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+++++|+.+... .+++.+.+++.+.+.....++. ....++|++++++++.+++ +|++|+|+++++..
T Consensus 24 ~~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y~~-----------~~~~~l~~~la~~~~~~~~-~v~~~~g~~~al~~ 91 (364)
T 1lc5_A 24 DQLLDFSANINPLGMPVSVKRALIDNLDCIERYPD-----------ADYFHLHQALARHHQVPAS-WILAGNGETESIFT 91 (364)
T ss_dssp GGSEECSSCCCTTCCCHHHHHHHHHTGGGGGSCCC-----------TTCHHHHHHHHHHHTSCGG-GEEEESSHHHHHHH
T ss_pred cceEEeccccCCCCCCHHHHHHHHHHHHHhhcCCC-----------CCHHHHHHHHHHHHCcCHH-HEEECCCHHHHHHH
Confidence 467888887754 4788899998887654322221 1234899999999998754 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCC-HHHHHHhcccCceEEEEccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPD-LDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d-~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
++.++ +||+|++.+|+|++.. ..++..|++++.++.+++..++ ++++.+.+.+++++|++++++||||.
T Consensus 92 ~~~~~------~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~v~i~~p~nptG~ 161 (364)
T 1lc5_A 92 VASGL------KPRRAMIVTPGFAEYG----RALAQSGCEIRRWSLREADGWQLTDAILEALTPDLDCLFLCTPNNPTGL 161 (364)
T ss_dssp HHHHH------CCSEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTTCCCTTHHHHCCTTCCEEEEESSCTTTCC
T ss_pred HHHHc------CCCeEEEeCCCcHHHH----HHHHHcCCeEEEEeCCcccccchhHHHHHhccCCCCEEEEeCCCCCCCC
Confidence 99875 5799999999998844 4456679999999987522223 46666777778899999999999999
Q ss_pred ccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccC-CCCCccEEEecCcCcCCCCc--ceEEE-EcccccccCCC
Q 017640 224 ILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDV-QGLDADFLVASSHKMCGPTG--IGFLF-GKSDLLSAMPP 292 (368)
Q Consensus 224 ~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~-~~~~~d~~~~s~~K~~g~~G--~G~l~-~~~~li~~l~~ 292 (368)
++| +++|.++|++||+++|+|++|+.... .++. +..+.+++++|+||.+|++| +|+++ .++++++.+.+
T Consensus 162 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~ 241 (364)
T 1lc5_A 162 LPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR 241 (364)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHH
Confidence 999 89999999999999999999984321 1232 34567899999999998777 79999 89888776653
Q ss_pred cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 293 FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 293 ~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
... ..+.+.....++..+++.. ..++.++++..++.+++.+.|.+.+|+
T Consensus 242 ~~~-----------------------~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~~~~ 290 (364)
T 1lc5_A 242 QQM-----------------------PWSVNALAALAGEVALQDS--AWQQATWHWLREEGARFYQALCQLPLL 290 (364)
T ss_dssp HSC-----------------------TTCSCHHHHHHHHHGGGCH--HHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred hCC-----------------------CCCCCHHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 321 1256777777777777652 246778888889999999999877554
No 85
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.95 E-value=3.8e-26 Score=220.29 Aligned_cols=266 Identities=15% Similarity=0.046 Sum_probs=199.3
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCC----cEEEeCCHHHHHHHHHHHccCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSG----EIVFTKNATEAINLVAYSWGLS 152 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~----~v~~t~g~t~a~~~~~~~~~~~ 152 (368)
.+.++.+.+++.+.+.. ++. .+..++...+..+++++++++++|.+.+. .+++|+|+|+|+.+++.++...
T Consensus 52 ~~~~~~v~e~~~~a~~~---~~~--~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~ 126 (452)
T 2dgk_A 52 TWDDENVHKLMDLSINK---NWI--DKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWR 126 (452)
T ss_dssp CCCCHHHHHHHHHTTTC---BTT--CTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhcc---CCC--ChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHH
Confidence 35567777777666532 221 12234556788889999999999998652 4899999999999998876210
Q ss_pred CC----CCC-----CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 153 NL----KSG-----DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 153 ~~----~~g-----d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
.. ++| ++|++++ .|.+ +...++..|++++.|++++ ++.+|+++|++++++++++|++++++|+||
T Consensus 127 ~~~~~~~~G~~~~~~~vi~~~-~h~~----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG 201 (452)
T 2dgk_A 127 WRKRMEAAGKPTDKPNLVCGP-VQIC----WHKFARYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTG 201 (452)
T ss_dssp HHHHHHHTTCCCSCCEEEESS-CCHH----HHHHHHHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTC
T ss_pred HHHHHHhcCCCCCCcEEEECC-CcHH----HHHHHHHcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCc
Confidence 00 033 5899998 7766 5556677899999999987 799999999999999999999999999999
Q ss_pred cccCHHHHHHHHHhc------CCEEEEecCCcCCcc-------cccCCCCCccEEEecCcCc-CCCCcceEEEEccc-cc
Q 017640 223 SILPIEEIVHWSHDV------GAKVLVDACQSVPHM-------VVDVQGLDADFLVASSHKM-CGPTGIGFLFGKSD-LL 287 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~------g~~li~D~a~~~~~~-------~~~~~~~~~d~~~~s~~K~-~g~~G~G~l~~~~~-li 287 (368)
.+.|+++|.++|+++ |+++++|++|+.+.. ++++...+.|++++|+||+ ++|.|+|+++++++ ++
T Consensus 202 ~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~ 281 (452)
T 2dgk_A 202 NYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEAL 281 (452)
T ss_dssp BBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGS
T ss_pred ccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHH
Confidence 999999999999995 999999999986543 2333334789999999995 46888999999764 33
Q ss_pred -ccCC--CcccCCcceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 288 -SAMP--PFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 288 -~~l~--~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+. +.+.++.. ..+ ..++.+....+++..+++.+...|++.+.++..++++++.+.|.++
T Consensus 282 ~~~~~~~~~~~~~~~---------------~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~ 346 (452)
T 2dgk_A 282 PQELVFNVDYLGGQI---------------GTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKL 346 (452)
T ss_dssp CGGGCEEECCTTCCE---------------EECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhccCccccCCCC---------------CCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3332 11111110 011 1345566566777788888777788999999999999999999988
Q ss_pred cCCC
Q 017640 364 HNTT 367 (368)
Q Consensus 364 ~g~t 367 (368)
++++
T Consensus 347 ~~~~ 350 (452)
T 2dgk_A 347 GPYE 350 (452)
T ss_dssp SSEE
T ss_pred CCeE
Confidence 7653
No 86
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.95 E-value=6.9e-26 Score=221.42 Aligned_cols=283 Identities=14% Similarity=0.092 Sum_probs=199.3
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC-CCcEEEeCCHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~a~~~~~~ 147 (368)
.|+++...+..+..+... .+... .+++...+..+....+..+++++++++++|.+. .+++++|+|+|+|+.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~---~l~~~-~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~ 169 (504)
T 2okj_A 94 RFFNQLSTGLDIIGLAGE---WLTST-ANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIM 169 (504)
T ss_dssp TEESSSSCCCCHHHHHHH---HHHHH-HCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHH
T ss_pred CEEEEccCCCCHHHHHHH---HHHHh-hccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHH
Confidence 488887666666655442 22221 133323344455567777889999999999983 3489999999999999998
Q ss_pred HccCCCC----CCC-----C-EEEEcCCCCcccHHHHHHHHHHcCC---EEEEEeCCCCCCCCHHHHHHhccc------C
Q 017640 148 SWGLSNL----KSG-----D-EVILTVAEHHSAIVPWQLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLSR------K 208 (368)
Q Consensus 148 ~~~~~~~----~~g-----d-~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~------~ 208 (368)
++..... ++| + .|+++.+.|+++...+ +..|. +++.||.++++.+|+++|++++++ +
T Consensus 170 ~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~----~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~ 245 (504)
T 2okj_A 170 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAG----AALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYV 245 (504)
T ss_dssp HHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHH----HHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHH----HHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCC
Confidence 8721000 145 6 7999999999865443 34455 899999988899999999999976 5
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc-----ccCCC-CCccEEEecCcCcCC-CCcceEEE
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV-----VDVQG-LDADFLVASSHKMCG-PTGIGFLF 281 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~-----~~~~~-~~~d~~~~s~~K~~g-~~G~G~l~ 281 (368)
+++|++++++|+||.+.|+++|.++|++||+++++|++|+.+... ..+.. .++|++++|+||+++ |.|+|+++
T Consensus 246 ~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~ 325 (504)
T 2okj_A 246 PFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL 325 (504)
T ss_dssp EEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred ceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEE
Confidence 899999999999999999999999999999999999999976643 22332 268999999999776 77899999
Q ss_pred Eccc-ccc----cCCCcccCCcceeecccCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 282 GKSD-LLS----AMPPFLGGGEMISDVFLDHSTFA-DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 282 ~~~~-li~----~l~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
++++ +++ ...++..+++.......+...+. ...+|+ ... ++..+++.+...|++.+.++..+++++
T Consensus 326 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~-----~~l---~~~a~l~~lg~~g~~~~~~~~~~~a~~ 397 (504)
T 2okj_A 326 VKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHV-----DIF---KFWLMWKAKGTVGFENQINKCLELAEY 397 (504)
T ss_dssp ESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBC-----CHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCc-----cHH---HHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 9874 544 23455543332111001111110 111122 222 333445555566889999999999999
Q ss_pred HHHHHHhhcCCC
Q 017640 356 SIIVIQERHNTT 367 (368)
Q Consensus 356 l~~~l~~~~g~t 367 (368)
+.+.|.+++|++
T Consensus 398 l~~~L~~~~~~~ 409 (504)
T 2okj_A 398 LYAKIKNREEFE 409 (504)
T ss_dssp HHHHHTTCTTEE
T ss_pred HHHHHhcCCCEE
Confidence 999999887754
No 87
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.95 E-value=6.9e-27 Score=218.53 Aligned_cols=217 Identities=13% Similarity=0.150 Sum_probs=171.1
Q ss_pred HHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC
Q 017640 114 ELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 192 (368)
.++|++++++++.+++ +|++|+|+++++..++.++ +++| |+|++.+|+|++.. ..++..|++++.++.++
T Consensus 61 ~~lr~~la~~~~~~~~-~v~~~~G~~~ai~~~~~~~----~~~g~d~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~ 131 (356)
T 1fg7_A 61 KAVIENYAQYAGVKPE-QVLVSRGADEGIELLIRAF----CEPGKDAILYCPPTYGMYS----VSAETIGVECRTVPTLD 131 (356)
T ss_dssp HHHHHHHHHHHTSCGG-GEEEESHHHHHHHHHHHHH----CCTTTCEEEECSSSCTHHH----HHHHHHTCEEEECCCCT
T ss_pred HHHHHHHHHHhCCChH-HEEEcCCHHHHHHHHHHHH----hCCCCCEEEEeCCChHHHH----HHHHHcCCEEEEeeCCC
Confidence 4899999999998764 9999999999999999998 7899 99999999998854 34455699999999887
Q ss_pred CCCCCHHHHHHhcccCceEEEEcccccccccccCHH---HHHHHHHhcCCEEEEecCCcCCcc--c-ccC-CCCCccEEE
Q 017640 193 DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE---EIVHWSHDVGAKVLVDACQSVPHM--V-VDV-QGLDADFLV 265 (368)
Q Consensus 193 ~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~---~i~~l~~~~g~~li~D~a~~~~~~--~-~~~-~~~~~d~~~ 265 (368)
++.+|+++++++++ ++++|++++++||||.++|.+ +|+++|+ +|+++|+|++|+.... + .++ ...+.++++
T Consensus 132 ~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~ 209 (356)
T 1fg7_A 132 NWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAIL 209 (356)
T ss_dssp TSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEE
T ss_pred CCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEE
Confidence 77899999999998 899999999999999999955 4555566 9999999999984331 1 222 334678999
Q ss_pred ecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 266 ASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 266 ~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
.|+||.+|++| +|++++++++++.+.+... .+ +.+.....++..+++......++
T Consensus 210 ~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~--------------------~~---~~~~~~~~a~~~~l~~~~~~~~~ 266 (356)
T 1fg7_A 210 RTLSKAFALAGLRCGFTLANEEVINLLMKVIA--------------------PY---PLSTPVADIAAQALSPQGIVAMR 266 (356)
T ss_dssp EESSSTTCCGGGCCEEEEECHHHHHHHHHHSC--------------------SS---CSCHHHHHHHHHHTSHHHHHHHH
T ss_pred ecchHhhcCchhhhEEEEeCHHHHHHHHHhcC--------------------CC---CCCHHHHHHHHHHhcCccHHHHH
Confidence 99999999888 8999999988876653321 11 45666666666665532211267
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 017640 344 KIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.++++.+++.+++.+.|.+++
T Consensus 267 ~~~~~~~~~~~~l~~~L~~~~ 287 (356)
T 1fg7_A 267 ERVAQIIAEREYLIAALKEIP 287 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 778888899999999998764
No 88
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.95 E-value=3.1e-26 Score=217.24 Aligned_cols=260 Identities=15% Similarity=0.118 Sum_probs=196.0
Q ss_pred CCeEEeccCCCCC--CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATSQ--KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
..++.|..+.+-. .++.+.+++.+.+..+. ..+ +.+...++..+...++++.+++++|.+ +.+ +++++++++.
T Consensus 45 ~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~-~~~-~~~~~~~g~~~~~~~l~~~la~~~g~~--~~i-~~~sGs~a~~ 119 (401)
T 1fc4_A 45 SHVINFCANNYLGLANHPDLIAAAKAGMDSHG-FGM-ASVRFICGTQDSHKELEQKLAAFLGME--DAI-LYSSCFDANG 119 (401)
T ss_dssp CEEEECCCSCTTSCTTCHHHHHHHHHHHHHHC-SCC-CSCHHHHCCBHHHHHHHHHHHHHHTCS--EEE-EESCHHHHHH
T ss_pred ccEEEeeccCcccccCCHHHHHHHHHHHHHhC-CCC-CCCCcccCCcHHHHHHHHHHHHHhCCC--cEE-EeCChHHHHH
Confidence 4455555553222 58999999999887642 211 111111112456778999999999986 244 5555678999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHI 217 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~ 217 (368)
.++.++ +++||.|++.++.|.+... .++..|++++.++.. |+++|++++++ ++++|+++++
T Consensus 120 ~~~~~~----~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~~~v~~~~~ 186 (401)
T 1fc4_A 120 GLFETL----LGAEDAIISDALNHASIID----GVRLCKAKRYRYANN-----DMQELEARLKEAREAGARHVLIATDGV 186 (401)
T ss_dssp TTHHHH----CCTTCEEEEETTCCHHHHH----HHHTSCSEEEEECTT-----CHHHHHHHHHHHHHTTCSSEEEEEESE
T ss_pred HHHHHH----cCCCCEEEEcchhHHHHHH----HHHHcCCceEEECCC-----CHHHHHHHHHHhhccCCCceEEEEeCC
Confidence 999988 8899999999999987543 355679999998843 88999998875 7899999999
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-c--------ccCCCCCccEEEecCcCcC-CCCcceEEEEccccc
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-V--------VDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLL 287 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~--------~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li 287 (368)
+||||.++|+++|.++|++||+++|+|++|+.+.. + +++.. +.|++++|+||.+ |+.| |+++++++++
T Consensus 187 ~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g-G~~~~~~~~~ 264 (401)
T 1fc4_A 187 FSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG-GYTAARKEVV 264 (401)
T ss_dssp ETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC-EEEEECHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC-EEEEcCHHHH
Confidence 99999999999999999999999999999975543 1 23332 5799999999988 7776 9999999888
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+.+.+....+ .+ .++.+...++++..+++.+.. .+.+.++..++.+++.+.|.+. |++
T Consensus 265 ~~l~~~~~~~------------------~~-~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~ 322 (401)
T 1fc4_A 265 EWLRQRSRPY------------------LF-SNSLAPAIVAASIKVLEMVEA--GSELRDRLWANARQFREQMSAA-GFT 322 (401)
T ss_dssp HHHHHHCHHH------------------HH-SCCCCHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHhCcCc------------------ee-CCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 7665322100 01 337788888888888888765 4778899999999999999886 543
No 89
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.95 E-value=2.7e-27 Score=224.37 Aligned_cols=260 Identities=15% Similarity=0.223 Sum_probs=191.3
Q ss_pred CCeEEeccCCCC---CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 66 KKLVYLDNAATS---QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 66 ~~~i~l~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+++++|+.+... .+++.+.+++.+.+........ .+. ......++|+.+++++|.+++ +|++|+|+++++
T Consensus 32 ~~~i~l~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~--~y~----~~~~~~~l~~~la~~~g~~~~-~v~~~~g~~~al 104 (397)
T 2zyj_A 32 PGILSFAGGLPAPELFPKEEAAEAAARILREKGEVAL--QYS----PTEGYAPLRAFVAEWIGVRPE-EVLITTGSQQAL 104 (397)
T ss_dssp TTCEEESSCCCCGGGCCHHHHHHHHHHHHHHHHHHHT--SCC----CTTCCHHHHHHHHHHHTSCGG-GEEEESHHHHHH
T ss_pred CCceecCCCCCCchhCCHHHHHHHHHHHHHhcchhhh--CCC----CCCCCHHHHHHHHHHhCCChh-hEEEeccHHHHH
Confidence 567899877544 3678899999888765210000 000 012234799999999997654 999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEE-EEcccccc
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLV-VIHHISNM 220 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v-~~~~~~n~ 220 (368)
..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++++ +|+++|++++++ ++++| ++++++||
T Consensus 105 ~~~~~~~----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~v~~~~~~~np 175 (397)
T 2zyj_A 105 DLVGKVF----LDEGSPVLLEAPSYMGAI----QAFRLQGPRFLTVPAGEEG-PDLDALEEVLKRERPRFLYLIPSFQNP 175 (397)
T ss_dssp HHHHHHH----CCTTCEEEEEESCCHHHH----HHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHCCCSCEEECCBSCTT
T ss_pred HHHHHHh----CCCCCEEEEeCCCcHHHH----HHHHHcCCEEEecCcCCCC-CCHHHHHHHHhhcCCeEEEECCCCcCC
Confidence 9999998 789999999999988844 4455679999999987665 899999999986 78887 58999999
Q ss_pred cccccCH---HHHHHHHHhcCCEEEEecCCcCCcc----cccCCCC------CccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 221 LASILPI---EEIVHWSHDVGAKVLVDACQSVPHM----VVDVQGL------DADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 221 tG~~~~l---~~i~~l~~~~g~~li~D~a~~~~~~----~~~~~~~------~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
||.++|. ++|.++|++||+++|+|++|+.... +.++..+ +.+++++|+||.+| +| +|+++++++
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~~~~~ 254 (397)
T 2zyj_A 176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAVAHPE 254 (397)
T ss_dssp TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEECCHH
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEecCHH
Confidence 9999994 5899999999999999999986332 1222222 34588999999999 66 799999998
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+.+...++ .. +.+.....++..+++......++.++++..++.+++.+.|.+.
T Consensus 255 ~~~~l~~~~~~~--------------------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (397)
T 2zyj_A 255 ALQKLVQAKQGA--------------------DL-HTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE 311 (397)
T ss_dssp HHHHHHHHHHHH--------------------HS-SCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh--------------------cC-CCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887765433211 11 2355566666566553211236677888888888999888764
No 90
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.95 E-value=8.7e-27 Score=223.89 Aligned_cols=252 Identities=16% Similarity=0.130 Sum_probs=190.3
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE
Q 017640 105 LSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN 184 (368)
Q Consensus 105 ~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~ 184 (368)
.+.+..+...++++.+++++|.+.. ++++++|+|.+++.+..++ .+++||+|++++++|+++...+...++..|++
T Consensus 102 ~~~g~~~~~~~~~~~la~~~g~~~~-~i~~~~g~taa~ea~~~a~---~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~ 177 (438)
T 1wyu_A 102 VSQGVLQATFEYQTMIAELAGLEIA-NASMYDGATALAEGVLLAL---RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAK 177 (438)
T ss_dssp GCHHHHHHHHHHHHHHHHHHTSSEE-CSCBSSHHHHHHHHHHHHH---HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCE
T ss_pred hhhhHHHHHHHHHHHHHHHhCCCcc-ceEEeCcHHHHHHHHHHHH---hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCE
Confidence 3556788899999999999999754 7899999995555554444 25789999999999999988888888889999
Q ss_pred EEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecC-CcCCcccccCCCCCccE
Q 017640 185 LKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDAC-QSVPHMVVDVQGLDADF 263 (368)
Q Consensus 185 v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a-~~~~~~~~~~~~~~~d~ 263 (368)
++.++. +++.+|+++ +++++++|+++++ |+||.+.|+++|.++|++||+++++|.. ++.|....+ ..++.|+
T Consensus 178 v~~v~~-~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~g~D~ 250 (438)
T 1wyu_A 178 LLTLPL-EGGRTPLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAYGADI 250 (438)
T ss_dssp EEEECC-BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHHTCSE
T ss_pred EEEEcC-cCCccCHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccCCCCE
Confidence 999997 567778766 6778999999999 9999999999999999999999997755 555554333 3457999
Q ss_pred EEecCcC-----cCCCCcceEEEEcccccccCCCcccCCcceeecccCC-CCC--CCCCCCCCCCCCCH---HHHHHHHH
Q 017640 264 LVASSHK-----MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDH-STF--ADPPSRFEAGTPAI---GEAIGLGA 332 (368)
Q Consensus 264 ~~~s~~K-----~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~-~~~--~~~~~~~~~gt~~~---~~~~a~~~ 332 (368)
+++|.+| +++++|+|++++++++++.+.+...|++........+ ..+ .....|++.+|+++ ..++++.+
T Consensus 251 ~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~a 330 (438)
T 1wyu_A 251 AVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMG 330 (438)
T ss_dssp EEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHH
T ss_pred EEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHH
Confidence 9999665 2333389999999999888876654432110000000 000 01122556678877 55666655
Q ss_pred H--HHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 333 A--IDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 333 a--l~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
+ +..+...|++.+.++..++++++.+.|.+++|++
T Consensus 331 a~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~ 367 (438)
T 1wyu_A 331 AMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVR 367 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 5 7777777899999999999999999999987764
No 91
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.95 E-value=4e-26 Score=216.84 Aligned_cols=263 Identities=16% Similarity=0.165 Sum_probs=192.3
Q ss_pred CCeEEeccCCCC---CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCC
Q 017640 66 KKLVYLDNAATS---QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g 137 (368)
.++++|+.+... .+++.+.+++.+.+....... . +.. .....++|+.+++++ |.+ ++++|++|+|
T Consensus 34 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~--~-y~~----~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g 106 (407)
T 2zc0_A 34 VKLISLAAGDPDPELIPRAVLGEIAKEVLEKEPKSV--M-YTP----ANGIPELREELAAFLKKYDHLEVSPENIVITIG 106 (407)
T ss_dssp CCCEECCSCCCCTTTSCHHHHHHHHHHHHHHCGGGG--S-CCC----TTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESH
T ss_pred CceEeCCCCCCCchhCCHHHHHHHHHHHHhhccccc--c-CCC----CCCCHHHHHHHHHHHHHhcCCCCCcceEEEecC
Confidence 367888776543 367889999988887531100 0 110 112336777777777 843 2249999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----c--CceE
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----R--KTKL 211 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~--~~~~ 211 (368)
+++|+..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++++ +|+++|+++++ + ++++
T Consensus 107 ~t~a~~~~~~~~----~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~ 177 (407)
T 2zc0_A 107 GTGALDLLGRVL----IDPGDVVITENPSYINTL----LAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQKVKL 177 (407)
T ss_dssp HHHHHHHHHHHH----CCTTCEEEEEESCCHHHH----HHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHh----cCCCCEEEEeCCChHHHH----HHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccCCceE
Confidence 999999999998 789999999999988843 4456679999999987665 89999999997 5 7888
Q ss_pred E-EEcccccccccccCHH---HHHHHHHhcCCEEEEecCCcCCcc----cccC---CCCCccEEEecCcCcCCCCc--ce
Q 017640 212 V-VIHHISNMLASILPIE---EIVHWSHDVGAKVLVDACQSVPHM----VVDV---QGLDADFLVASSHKMCGPTG--IG 278 (368)
Q Consensus 212 v-~~~~~~n~tG~~~~l~---~i~~l~~~~g~~li~D~a~~~~~~----~~~~---~~~~~d~~~~s~~K~~g~~G--~G 278 (368)
| ++++++||||.++|.+ +|.++|++||+++|+|++|+.+.. ..++ +..+.+++++|+||.+| +| +|
T Consensus 178 v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G 256 (407)
T 2zc0_A 178 IYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-TGFRIG 256 (407)
T ss_dssp EEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-TTSCCE
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-CCcceE
Confidence 7 5899999999999965 999999999999999999986432 1112 22246689999999999 56 89
Q ss_pred EEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HH-hCHHHHHHHHHHHHHHH
Q 017640 279 FLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL-ST-IGMQKIHAYEVKWIICS 356 (368)
Q Consensus 279 ~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~-~~-~g~~~i~~~~~~l~~~l 356 (368)
++++++++++.+.+....++ .+.+.....++..+++.. .+ ..++.++++..++.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l 315 (407)
T 2zc0_A 257 WIIAEGEILKKVLMQKQPID---------------------FCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIM 315 (407)
T ss_dssp EEECCHHHHHHHHHHHTTTT---------------------SSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHhhc---------------------CCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 99999888876654332111 133555666666666643 12 35678888889999999
Q ss_pred HHHHHhh-cCC
Q 017640 357 IIVIQER-HNT 366 (368)
Q Consensus 357 ~~~l~~~-~g~ 366 (368)
.+.|.+. +++
T Consensus 316 ~~~L~~~~~~~ 326 (407)
T 2zc0_A 316 LKALENHLPNA 326 (407)
T ss_dssp HHHHHHHCTTS
T ss_pred HHHHHHhCCCC
Confidence 9999874 444
No 92
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.2e-26 Score=220.97 Aligned_cols=260 Identities=15% Similarity=0.148 Sum_probs=194.1
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC----CC-CCCcEEEeCCH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN----AS-DSGEIVFTKNA 138 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~----~~-~~~~v~~t~g~ 138 (368)
++++++|+.+.++ +.++.+.+++ +.+.... . .+.. .....++|+.++++++ .+ .+++|++|+|+
T Consensus 42 g~~~i~l~~~~~~~~~~~~v~~a~-~~l~~~~-~----~y~~----~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~ 111 (409)
T 2gb3_A 42 GVRIHHLNIGQPDLKTPEVFFERI-YENKPEV-V----YYSH----SAGIWELREAFASYYKRRQRVDVKPENVLVTNGG 111 (409)
T ss_dssp TCEEEECSSCCCCSCCCTHHHHHH-HHTCCSS-C----CCCC----TTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHH
T ss_pred CCCEEeccCCCCCCCCCHHHHHHH-HHHhcCC-C----CCCC----CCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCH
Confidence 3678999998887 5678888888 7664310 0 1111 1112356777777764 22 22489999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++|+..++.++ +++||+|++.+++|++... .++..|.+++.++.++ ++.+ +++|++++++++++|++++
T Consensus 112 t~a~~~~~~~~----~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~~-~~~l~~~l~~~~~~v~~~~ 182 (409)
T 2gb3_A 112 SEAILFSFAVI----ANPGDEILVLEPFYANYNA----FAKIAGVKLIPVTRRMEEGFAI-PQNLESFINERTKGIVLSN 182 (409)
T ss_dssp HHHHHHHHHHH----CCTTCEEEEEESCCTHHHH----HHHHHTCEEEEEECCGGGTSCC-CTTGGGGCCTTEEEEEEES
T ss_pred HHHHHHHHHHh----CCCCCEEEEcCCCchhHHH----HHHHcCCEEEEeccCCCCCCcc-HHHHHHhhCcCCeEEEECC
Confidence 99999999998 7899999999999998544 3455699999999875 3444 8899999988999999999
Q ss_pred cccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---ccc-CCC-CCccEEEecCcCcCCCCc--ceEEEEcc-c
Q 017640 217 ISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVD-VQG-LDADFLVASSHKMCGPTG--IGFLFGKS-D 285 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~-~~~-~~~d~~~~s~~K~~g~~G--~G~l~~~~-~ 285 (368)
++||||.++| +++|.++|++||+++|+|++|+.+.. ... +.. .+.|++++|+||.+|++| +|++++++ +
T Consensus 183 p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~ 262 (409)
T 2gb3_A 183 PCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEE 262 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCccceEEEEEECcHH
Confidence 9999999987 78999999999999999999986432 112 222 357999999999999888 99999999 8
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+++.+.+.... .. +++.....++..+++.. ...++.++++..++.+++.+.|.+. |
T Consensus 263 l~~~l~~~~~~---------------------~~-~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g 318 (409)
T 2gb3_A 263 LISHAMKLAQG---------------------RL-APPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEH-G 318 (409)
T ss_dssp HHHHHHHHHHH---------------------SC-CCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred HHHHHHHHHhc---------------------cC-CCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 87766543211 11 45666666666666432 2246778888999999999999876 5
Q ss_pred CC
Q 017640 366 TT 367 (368)
Q Consensus 366 ~t 367 (368)
++
T Consensus 319 ~~ 320 (409)
T 2gb3_A 319 LK 320 (409)
T ss_dssp CC
T ss_pred ce
Confidence 44
No 93
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.95 E-value=1.4e-26 Score=217.37 Aligned_cols=256 Identities=14% Similarity=0.082 Sum_probs=184.9
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
.+++++.+.+++.+.+.....++ .+...++++.+++++|.+ ++++|+|+++|+..++.++.. .++
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~~~~-----------~~~~~~l~~~la~~~~~~---~v~~~~ggt~al~~~~~~~~~-~~~ 72 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQLTQ-----------GKRSLLFEEALCEFLGVK---HALVFNSATSALLTLYRNFSE-FSA 72 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSCCSS-----------SHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHSSC-CCT
T ss_pred CCCCCHHHHHHHHHHHHcCcccC-----------ChHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHhcc-cCC
Confidence 35789999999988875421111 234668999999999986 899999999999999998821 168
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHH
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSH 235 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~ 235 (368)
+||+|++++++|++....+ +..|++++.+++++++.+|+++|++++++++++|+++++ ||.+.|+++|.++|+
T Consensus 73 ~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~ 145 (375)
T 2fnu_A 73 DRNEIITTPISFVATANML----LESGYTPVFAGIKNDGNIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCK 145 (375)
T ss_dssp TSCEEEECSSSCTHHHHHH----HHTTCEEEECCBCTTSSBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHH
T ss_pred CCCEEEECCCccHhHHHHH----HHCCCEEEEeccCCCCCCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHH
Confidence 9999999999999966543 456999999999887889999999999988999888877 999999999999999
Q ss_pred hcCCEEEEecCCcCCccccc--CCCCCccEEEecCc--CcCCCCcceEEEEc--ccccccCCCcccCCcceeecccCCCC
Q 017640 236 DVGAKVLVDACQSVPHMVVD--VQGLDADFLVASSH--KMCGPTGIGFLFGK--SDLLSAMPPFLGGGEMISDVFLDHST 309 (368)
Q Consensus 236 ~~g~~li~D~a~~~~~~~~~--~~~~~~d~~~~s~~--K~~g~~G~G~l~~~--~~li~~l~~~~~g~~~~~~~~~~~~~ 309 (368)
+||+++|+|++|+.+..+.. +... .|+++.|++ |++|+ |+|+++++ +++++.+++...++.....
T Consensus 146 ~~~~~li~D~a~~~~~~~~~~~~~~~-~~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~------- 216 (375)
T 2fnu_A 146 KHSLSFLSDSSHALGSEYQNKKVGGF-ALASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKD------- 216 (375)
T ss_dssp HHTCEEEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESS-------
T ss_pred HcCCEEEEECccccCCeECCeecccc-CCeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCcccc-------
Confidence 99999999999998765422 2222 256666666 99988 88888884 5576666554433321000
Q ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 310 FADPPSRFEAGTPAIG-EAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 310 ~~~~~~~~~~gt~~~~-~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..+|+.++.+.. .+..+..++.+....+++.+.++..++++++.+.|.+++|+
T Consensus 217 ----~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 270 (375)
T 2fnu_A 217 ----FFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYF 270 (375)
T ss_dssp ----SSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred ----ccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Confidence 011111111100 01111122222233467888899999999999999887664
No 94
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.95 E-value=2.4e-27 Score=230.35 Aligned_cols=286 Identities=14% Similarity=0.050 Sum_probs=204.9
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCC---cEEEeCCHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYELARKKVAAFINASDSG---EIVFTKNATEA 141 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~---~v~~t~g~t~a 141 (368)
+.+.|..+. .++++.|++++.+.+...+ ++|....+..+....+..+.+++++++++|++.++ +|++++|+ ++
T Consensus 45 ~~i~L~a~e-~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs-~a 122 (483)
T 1rv3_A 45 VGLELIASE-NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGS-PA 122 (483)
T ss_dssp SSEECCTTC-CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH-HH
T ss_pred cCeEEEcCC-CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcH-HH
Confidence 457886554 4789999999988876543 44433222333345667778999999999998542 37777776 88
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHH----HHHHHcC--CEEEEEeCC-CCCCCCHHHHHHhcc-cCceEEE
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQ----LVAQKTG--ANLKFLNLN-DDESPDLDKLKEMLS-RKTKLVV 213 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g--~~v~~v~~~-~~~~~d~~~l~~~l~-~~~~~v~ 213 (368)
+..++.++ +++||+|++.+++|.++...+. ..++..| .+++.++++ +++.+|+++|+++++ .++++|+
T Consensus 123 n~~~~~al----l~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~~~~~iD~d~le~~i~~~~tklIi 198 (483)
T 1rv3_A 123 NFAVYTAL----VEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLII 198 (483)
T ss_dssp HHHHHHHH----TCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEE
T ss_pred HHHHHHHh----cCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECccccCCCcCCHHHHHHHHhhcCCcEEE
Confidence 88888888 8999999999999988753221 0111223 455556556 568899999999998 7899999
Q ss_pred EcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCC---CccEEEecCcCcC-CCCcceEEEEccccccc
Q 017640 214 IHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGL---DADFLVASSHKMC-GPTGIGFLFGKSDLLSA 289 (368)
Q Consensus 214 ~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~ 289 (368)
+ +++|++ .++|+++|.++|++||+++++|++|+.|....+.... +.|++++|+||++ ||.| |+++++++++.
T Consensus 199 ~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~~~~~~~- 274 (483)
T 1rv3_A 199 A-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS- 274 (483)
T ss_dssp E-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEEECSBCC-
T ss_pred E-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEEcchhhh-
Confidence 9 889998 8999999999999999999999999876654443333 6899999999954 7777 99999988653
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
++ ..+|....+..... +.........|+++...++++..+++...+.+++.+.++..++++++.+.|.++ |++
T Consensus 275 ~~--~~~g~~~~y~~~~~--~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 347 (483)
T 1rv3_A 275 VD--PKTGKEILYNLESL--INSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYK 347 (483)
T ss_dssp ---------CCBCCHHHH--HHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred hc--cccCcchhhHHHHH--hhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCE
Confidence 33 11111100000000 000000112689999999999999998876678899999999999999999886 643
No 95
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.95 E-value=1e-26 Score=218.62 Aligned_cols=257 Identities=15% Similarity=0.068 Sum_probs=188.9
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCHHHHHHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNATEAINL 144 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~t~a~~~ 144 (368)
+++.|+.+... +.|+.+.+++.+.+.....++.. .+..+..+.+.+.+.+.+|.+ .+++|++|+|+++++..
T Consensus 24 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~------~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~ 97 (376)
T 3ezs_A 24 RGLDLGIGEPQFETPKFIQDALKNHTHSLNIYPKS------AFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFN 97 (376)
T ss_dssp CCCBCSSCCCCSCCCHHHHHHHHTTGGGGGSCCCT------TCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHH
T ss_pred CEEEeCCCCCCCCCCHHHHHHHHHhhhhcCCCCCC------CCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHH
Confidence 67888888766 57889999988776433222221 111333334444444444873 23599999999999999
Q ss_pred HHHHccCCCCCC--CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKS--GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~--gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG 222 (368)
++.++ .++ ||+|++.+|+|++. ...++..|.+++.++.++++.+++ ++++++.+++++|++++++||||
T Consensus 98 ~~~~~----~~~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~-~l~~~~~~~~~~v~~~~p~nptG 168 (376)
T 3ezs_A 98 FPSFV----LFDYQNPTIAYPNPFYQIY----EGAAKFIKAKSLLMPLTKENDFTP-SLNEKELQEVDLVILNSPNNPTG 168 (376)
T ss_dssp HHHHH----TTTCSSCEEEEEESCCTHH----HHHHHHTTCEEEEEECCGGGTSCC-CCCHHHHHHCSEEEECSSCTTTC
T ss_pred HHHHH----cCCCCCCEEEEecCCcHhH----HHHHHHcCCEEEEcccCCCCCcch-hHHhhhccCCCEEEEcCCCCCcC
Confidence 99998 788 99999999999874 444566799999999986644555 67777777889999999999999
Q ss_pred cccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccC---------CCCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDV---------QGLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 223 ~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~---------~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
.++| +++|.++|++||+++|+|++|+.... +... +..+.++++.|+||.+|.+| +|+++.+++
T Consensus 169 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~ 248 (376)
T 3ezs_A 169 RTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSR 248 (376)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHH
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCHH
Confidence 9999 66788889999999999999985322 1111 03567899999999998777 899999998
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+++.+...... ...+.+.....++..+++... .++.++++..++.+++.+.|.
T Consensus 249 ~~~~~~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~ 301 (376)
T 3ezs_A 249 LLEKYKAFRAY---------------------LGYTSANAIQKASEAAWLDDR--HAEFFRNIYANNLKLARKIFK 301 (376)
T ss_dssp HHHHHHHHHTT---------------------TCCCCCHHHHHHHHHHHHCSH--HHHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHhh---------------------hcCCCChHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHhc
Confidence 88776543221 123677778887777777422 257777888888888877765
No 96
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.94 E-value=4.1e-26 Score=216.18 Aligned_cols=209 Identities=13% Similarity=0.167 Sum_probs=162.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHh-----hccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-CCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAY-----NSNVHRGIHFLSAKATDEYELARKKVAAFINAS-DSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-~~~~v~~t~g~ 138 (368)
++++.|..+... ++++.+.+++.+.+... ..++. ..+..+..+.+.+.+.+.+|.+ .+++|++|+|+
T Consensus 35 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~------~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~ 108 (398)
T 3ele_A 35 ENVYDFSIGNPSIPAPQIVNDTIKELVTDYDSVALHGYTS------AQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGA 108 (398)
T ss_dssp GGCEECCSCCCCSCCCHHHHHHHHHHHHHSCHHHHHSCCC------TTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSH
T ss_pred CCeEEeecCCCCCCCCHHHHHHHHHHHhcCCccccCCcCC------CCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCH
Confidence 567899888766 67899999999888762 21111 1111334444444555555643 23499999999
Q ss_pred HHHHHHHHHHccCCCCCCC-CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEcc
Q 017640 139 TEAINLVAYSWGLSNLKSG-DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
++++..++.++ +++| |+|++.+|+|++. ...++..|++++.++.++ ++.+|+++|++++++++++|++++
T Consensus 109 ~~al~~~~~~l----~~~g~d~vl~~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 180 (398)
T 3ele_A 109 AASLSICFRAL----TSDAYDEFITIAPYFPEY----KVFVNAAGARLVEVPADTEHFQIDFDALEERINAHTRGVIINS 180 (398)
T ss_dssp HHHHHHHHHHH----CCSTTCEEEEESSCCTHH----HHHHHHTTCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECS
T ss_pred HHHHHHHHHHH----cCCCCCEEEEeCCCchhh----HHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcC
Confidence 99999999998 8899 9999999998884 444566799999999975 468899999999999999999999
Q ss_pred cccccccccC---HHHHHHHHHh------cCCEEEEecCCcCCc-----ccccCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 217 ISNMLASILP---IEEIVHWSHD------VGAKVLVDACQSVPH-----MVVDVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 217 ~~n~tG~~~~---l~~i~~l~~~------~g~~li~D~a~~~~~-----~~~~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
++||||.++| +++|+++|++ ||+++|+|++|+... .+......+.+++++|+||.+|++| +|++
T Consensus 181 p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 260 (398)
T 3ele_A 181 PNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSKSLSLPGERIGYV 260 (398)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTTTSSCTTTCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhhcCCCccceeEEE
Confidence 9999999999 6777789999 999999999998522 2222233467899999999998777 9999
Q ss_pred EEcccccc
Q 017640 281 FGKSDLLS 288 (368)
Q Consensus 281 ~~~~~li~ 288 (368)
++++++++
T Consensus 261 ~~~~~~~~ 268 (398)
T 3ele_A 261 LVPDEVYD 268 (398)
T ss_dssp ECCTTSTT
T ss_pred EEcchhhh
Confidence 99998654
No 97
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.94 E-value=4.2e-26 Score=219.66 Aligned_cols=261 Identities=14% Similarity=0.178 Sum_probs=192.0
Q ss_pred CCeEEeccCCCC---CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS---QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~ 138 (368)
++++.|..+.+. .+++.+.+++.+.+...... ..++.......++|+++++++ |.+++++|++|+|+
T Consensus 76 ~~~i~l~~g~p~~~~~p~~~v~~a~~~~l~~~~~~------~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~ 149 (448)
T 3aow_A 76 SDIISLAGGLPNPKTFPKEIIRDILVEIMEKYADK------ALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGS 149 (448)
T ss_dssp SSSEECCCCCCCGGGSCHHHHHHHHHHHHHHSHHH------HHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSH
T ss_pred CCcEeCCCCCCCchhCCHHHHHHHHHHHHHhhhHH------HhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcH
Confidence 567888777654 36778888888877652100 000000122336777777777 88322499999999
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc----c--CceEE
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS----R--KTKLV 212 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~----~--~~~~v 212 (368)
++++..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++++ +|+++|+++++ + ++++|
T Consensus 150 ~~al~~~~~~l----~~~Gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~~~~k~v 220 (448)
T 3aow_A 150 QQALDLIGRVF----LNPGDIVVVEAPTYLAAL----QAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQGKKVKVV 220 (448)
T ss_dssp HHHHHHHHHHH----CCTTCEEEEEESCCHHHH----HHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHH----cCCCCEEEEeCCChHHHH----HHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccCCCCeEE
Confidence 99999999998 889999999999888854 4455679999999987765 79999999997 5 78887
Q ss_pred -EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCCCCccEEEecCcCcCCCCc--ceE
Q 017640 213 -VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQGLDADFLVASSHKMCGPTG--IGF 279 (368)
Q Consensus 213 -~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~~~~d~~~~s~~K~~g~~G--~G~ 279 (368)
++++++||||.++| +++|.++|++||+++|+|++|+.... ++ .++..+.++++.|++|.+| +| +||
T Consensus 221 ~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~GlriG~ 299 (448)
T 3aow_A 221 YTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PGFRIGW 299 (448)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GGGCCEE
T ss_pred EECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-ccccEEE
Confidence 57999999999998 56999999999999999999985432 11 2233357899999999999 77 899
Q ss_pred EEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHH
Q 017640 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-TIGMQKIHAYEVKWIICSII 358 (368)
Q Consensus 280 l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-~~g~~~i~~~~~~l~~~l~~ 358 (368)
+++++++++.+......+ ..+.+.....++..+++... ...++.++++..+..+++.+
T Consensus 300 v~~~~~l~~~l~~~~~~~---------------------~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~ 358 (448)
T 3aow_A 300 MVGDPGIIRKMEIAKQST---------------------DLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLE 358 (448)
T ss_dssp EEECHHHHHHHHHHHHHH---------------------HSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHh---------------------cCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999887765432211 01446666666666665321 11366778888888899999
Q ss_pred HHHhh
Q 017640 359 VIQER 363 (368)
Q Consensus 359 ~l~~~ 363 (368)
.|.+.
T Consensus 359 ~L~~~ 363 (448)
T 3aow_A 359 ALEEF 363 (448)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 88874
No 98
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.94 E-value=8.5e-26 Score=220.41 Aligned_cols=275 Identities=15% Similarity=0.078 Sum_probs=205.8
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC--CCC--cEEEeCCHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS--DSG--EIVFTKNATEAINL 144 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~--~~~--~v~~t~g~t~a~~~ 144 (368)
+++.....+.+++.+.+++.+.+.....++ ...+...+..+++++++++++|++ +++ ..++|+|+++++.+
T Consensus 58 ~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~-----~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~ 132 (502)
T 3hbx_A 58 LNLASFVTTWMEPECDKLIMSSINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIML 132 (502)
T ss_dssp GBTTCCSCCCCCHHHHHHHHHTTTCBTTCT-----TTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHH
T ss_pred ceeccccCCCCCHHHHHHHHHHhccCCCCh-----hcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHH
Confidence 344444445778888888887664422221 223446778888999999999998 332 22469999999999
Q ss_pred HHHHccCCCC----CCCC-----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEE
Q 017640 145 VAYSWGLSNL----KSGD-----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVI 214 (368)
Q Consensus 145 ~~~~~~~~~~----~~gd-----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~ 214 (368)
++.++..... ++|+ +|+++.++|.+ +...++..|++++.|+++++ +.+|+++|++++++++++|++
T Consensus 133 a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s----~~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~ 208 (502)
T 3hbx_A 133 AGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVC----WEKFARYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAA 208 (502)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHH----HHHHHHHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEE
T ss_pred HHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHH----HHHHHHHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEE
Confidence 9887621100 1255 89999998888 55567778999999999876 899999999999999999999
Q ss_pred cccccccccccCHHHHHHHHHhc------CCEEEEecCCcCCc-------ccccCCCCCccEEEecCcCcC-CCCcceEE
Q 017640 215 HHISNMLASILPIEEIVHWSHDV------GAKVLVDACQSVPH-------MVVDVQGLDADFLVASSHKMC-GPTGIGFL 280 (368)
Q Consensus 215 ~~~~n~tG~~~~l~~i~~l~~~~------g~~li~D~a~~~~~-------~~~~~~~~~~d~~~~s~~K~~-g~~G~G~l 280 (368)
++++|+||.+.|+++|.++|+++ |+++++|++|+.+. .+.++...++|++++|+||++ +|.|+|++
T Consensus 209 ~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~ 288 (502)
T 3hbx_A 209 ILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWV 288 (502)
T ss_dssp EBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEE
T ss_pred ecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEE
Confidence 99999999999999999999999 99999999998433 234444457999999999965 78889998
Q ss_pred EEccc-cccc-CC--CcccCCcceeecccCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 017640 281 FGKSD-LLSA-MP--PFLGGGEMISDVFLDHSTFADPPSRF-EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIIC 355 (368)
Q Consensus 281 ~~~~~-li~~-l~--~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~ 355 (368)
+++++ .+.. +. +.+.++.. ..+ ..++.+...++++..++..+...|+..+.++..+++++
T Consensus 289 ~~~~~~~l~~~~~~~~~yl~~~~---------------~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~ 353 (502)
T 3hbx_A 289 IWRNKEDLPEELIFHINYLGADQ---------------PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIV 353 (502)
T ss_dssp EESSGGGSCGGGCEEECSSSSCE---------------EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCHHHhhHHhccCcccccCCC---------------CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88753 3322 11 11111111 011 13456666778888889988887889999999999999
Q ss_pred HHHHHHhhcCCC
Q 017640 356 SIIVIQERHNTT 367 (368)
Q Consensus 356 l~~~l~~~~g~t 367 (368)
+.+.|.++++++
T Consensus 354 l~~~L~~~~~~~ 365 (502)
T 3hbx_A 354 LREGLEKTERFN 365 (502)
T ss_dssp HHHHHHTTTCEE
T ss_pred HHHHHHhCCCEE
Confidence 999999887654
No 99
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.94 E-value=6.5e-26 Score=221.24 Aligned_cols=284 Identities=12% Similarity=0.055 Sum_probs=200.3
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
.||++...++.++.+.+++..... +++...+..+....++.+++++++++++|.++.+.++||+|+|+|+..++.+
T Consensus 102 ~yl~~~~~~~~~~~v~~~~~~~~~----n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ 177 (497)
T 2qma_A 102 DCIAHLHTPPLMPAVAAEAMIAAL----NQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLML 177 (497)
T ss_dssp TBCSSSCCCCBHHHHHHHHHHHHH----CCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHH
T ss_pred CeeEeCCCCCcHHHHHHHHHHHhh----cccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHH
Confidence 599999999999999988866543 2222333444566777888999999999997545899999999999999887
Q ss_pred ccCCCC---------CC------CC-EEEEcCCCCcccHHHHHHHHHHcCC---EEEEEeCCCCCCCCHHHHHHhcccC-
Q 017640 149 WGLSNL---------KS------GD-EVILTVAEHHSAIVPWQLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLSRK- 208 (368)
Q Consensus 149 ~~~~~~---------~~------gd-~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~~- 208 (368)
++...+ .+ |+ .|+++.++|+++... ++..|. +++.+|.++++.+|+++|+++++++
T Consensus 178 ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~----~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~ 253 (497)
T 2qma_A 178 ARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKS----ASWMGLGEKAVMTVDANADGTMDITKLDEVIAQAK 253 (497)
T ss_dssp HHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHH----HHHTTSCGGGEEEECBCTTSSBCGGGHHHHHHHHH
T ss_pred HHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHH----HHHcCCCcccEEEEecCCCCcCCHHHHHHHHHHHH
Confidence 411001 12 46 799999999986544 344454 7999999888999999999999753
Q ss_pred -----ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc----CCCC-CccEEEecCcCc-CCCCcc
Q 017640 209 -----TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD----VQGL-DADFLVASSHKM-CGPTGI 277 (368)
Q Consensus 209 -----~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~----~~~~-~~d~~~~s~~K~-~g~~G~ 277 (368)
+.+|++++++|+||.+.|+++|.++|++||+++++|++|+.+..+.+ +... ++|++++|+||+ ++|.|+
T Consensus 254 ~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~ 333 (497)
T 2qma_A 254 AEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISC 333 (497)
T ss_dssp HTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSC
T ss_pred HCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcce
Confidence 34889999999999999999999999999999999999997766444 2223 689999999995 557779
Q ss_pred eEEEEcccc-cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 278 GFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 278 G~l~~~~~l-i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
|+++++++. ++.+.. ..............+ .....+ ++... ..+++..+++.+...|++.+.++..++++++
T Consensus 334 G~l~~~~~~~~~~~~~---~~~yl~~~~~~~~~~--~~~~~~-~~r~~-~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l 406 (497)
T 2qma_A 334 GALLVNDKSNFKFLLH---HADYLNREHDELPNL--VDKSIA-TTKRF-DALKVFMTMQNVGPKALGDMYDHLLAQTLEV 406 (497)
T ss_dssp EEEEESCGGGGGGGCC-------------------------C-CSCCC-THHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCHHHHHHhcC---CchhcCCccccCCCc--cccCCC-CCCch-hHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 999998754 333321 100000000000000 000001 11111 1234556677666667889999999999999
Q ss_pred HHHHHhhcCCC
Q 017640 357 IIVIQERHNTT 367 (368)
Q Consensus 357 ~~~l~~~~g~t 367 (368)
.+.|+++++++
T Consensus 407 ~~~L~~~~~~~ 417 (497)
T 2qma_A 407 ADMIRTNDQFE 417 (497)
T ss_dssp HHHHHTCTTEE
T ss_pred HHHHhhCCCeE
Confidence 99999877653
No 100
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=2.7e-26 Score=219.53 Aligned_cols=261 Identities=14% Similarity=0.146 Sum_probs=191.2
Q ss_pred CCeEEeccCCCC---CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC--CCCcEEEeC
Q 017640 66 KKLVYLDNAATS---QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS--DSGEIVFTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~--~~~~v~~t~ 136 (368)
++++.|..+... .+++.+.+++.+.+........ .+.. .....++|+.+++++ |.+ .+++|++|+
T Consensus 43 ~~~idl~~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~--~y~~----~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~ 116 (425)
T 1vp4_A 43 KDAISFGGGVPDPETFPRKELAEIAKEIIEKEYHYTL--QYST----TEGDPVLKQQILKLLERMYGITGLDEDNLIFTV 116 (425)
T ss_dssp TTCEECCCCSCCGGGSCHHHHHHHHHHHHHHSHHHHT--SCCC----TTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEE
T ss_pred CCceeCCCCCCCcccCCHHHHHHHHHHHHhhcchhhc--CCCC----CCCCHHHHHHHHHHHHhccCCCCCCcccEEEec
Confidence 567888776543 3678899999888765210000 0100 112236777777777 842 224999999
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--------C
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR--------K 208 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~--------~ 208 (368)
|+++++..++.++ +++||+|++.+|+|++.. ..++..|++++.++.++++ +|+++|++++++ +
T Consensus 117 G~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~ 187 (425)
T 1vp4_A 117 GSQQALDLIGKLF----LDDESYCVLDDPAYLGAI----NAFRQYLANFVVVPLEDDG-MDLNVLERKLSEFDKNGKIKQ 187 (425)
T ss_dssp HHHHHHHHHHHHH----CCTTCEEEEEESCCHHHH----HHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTCGGG
T ss_pred cHHHHHHHHHHHh----CCCCCEEEEeCCCcHHHH----HHHHHcCCEEEEeccCCCC-CCHHHHHHHHHhhhhcccCCC
Confidence 9999999999998 789999999999888844 4455679999999987665 799999999876 7
Q ss_pred ceEE-EEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccC---CCCCccEEEecCcCcCCCCc-
Q 017640 209 TKLV-VIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDV---QGLDADFLVASSHKMCGPTG- 276 (368)
Q Consensus 209 ~~~v-~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~---~~~~~d~~~~s~~K~~g~~G- 276 (368)
+++| ++++++||||.++| +++|.++|++||+++|+|++|+.... ..++ +..+.+++++|+||.+| +|
T Consensus 188 ~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~ 266 (425)
T 1vp4_A 188 VKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PGL 266 (425)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GGG
T ss_pred ceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-ccc
Confidence 8887 58999999999998 57899999999999999999985321 1122 22356799999999999 77
Q ss_pred -ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHhCHHHHHHHHHHHHH
Q 017640 277 -IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL-STIGMQKIHAYEVKWII 354 (368)
Q Consensus 277 -~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~-~~~g~~~i~~~~~~l~~ 354 (368)
+|++++++++++.+......+ ..+.+.....++..+++.. ....++.++++..++.+
T Consensus 267 r~G~~~~~~~~~~~l~~~~~~~---------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (425)
T 1vp4_A 267 RIGMVAGSKEFIRKIVQAKQSA---------------------DLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRT 325 (425)
T ss_dssp CEEEEECCHHHHHHHHHHHHHH---------------------HSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHH
T ss_pred ceEEEeeCHHHHHHHHHHhhhh---------------------cCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 799999998887765432211 1144666777777777643 11236778888888999
Q ss_pred HHHHHHHhh
Q 017640 355 CSIIVIQER 363 (368)
Q Consensus 355 ~l~~~l~~~ 363 (368)
++.+.|.+.
T Consensus 326 ~l~~~L~~~ 334 (425)
T 1vp4_A 326 VMLNALEEY 334 (425)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998875
No 101
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.94 E-value=5.5e-26 Score=213.57 Aligned_cols=222 Identities=20% Similarity=0.261 Sum_probs=177.8
Q ss_pred HHHHHHHHHHcC-CCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC
Q 017640 114 ELARKKVAAFIN-ASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND 192 (368)
Q Consensus 114 ~~~r~~la~~~~-~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~ 192 (368)
.++|+.++++++ .++ ++|++|+|+++|+..++.++ +++||+|++.+|.|++... .++..|++++.+++++
T Consensus 66 ~~l~~~la~~~~~~~~-~~v~~~~g~~~a~~~~~~~l----~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~ 136 (375)
T 3op7_A 66 PAFKKSVSQLYTGVKP-EQILQTNGATGANLLVLYSL----IEPGDHVISLYPTYQQLYD----IPKSLGAEVDLWQIEE 136 (375)
T ss_dssp HHHHHHHHTTSSSCCG-GGEEEESHHHHHHHHHHHHH----CCTTCEEEEEESSCTHHHH----HHHHTTCEEEEEEEEG
T ss_pred HHHHHHHHHHhccCCh-hhEEEcCChHHHHHHHHHHh----cCCCCEEEEeCCCchhHHH----HHHHcCCEEEEEeccc
Confidence 479999999984 444 49999999999999999998 8999999999999988543 4556799999999873
Q ss_pred --CCCCCHHHHHHhcccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc-c-c-CCCCCccEE
Q 017640 193 --DESPDLDKLKEMLSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV-V-D-VQGLDADFL 264 (368)
Q Consensus 193 --~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~-~-~-~~~~~~d~~ 264 (368)
++.+|+++|++++++++++|++++++||||.++| +++|.++|++||+++|+|++|+..... . . .+..+.+++
T Consensus 137 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~ 216 (375)
T 3op7_A 137 ENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIA 216 (375)
T ss_dssp GGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEE
T ss_pred cCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEE
Confidence 3568999999999999999999999999999999 999999999999999999999853321 1 1 122356789
Q ss_pred EecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCH
Q 017640 265 VASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGM 342 (368)
Q Consensus 265 ~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~ 342 (368)
++|++|.+|++| +|++++++++++.++.....+ ..+.+....+++..+++..+. .+
T Consensus 217 ~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~-~~ 274 (375)
T 3op7_A 217 VNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYT---------------------MICAGVFDDLVAQLALAHYQE-IL 274 (375)
T ss_dssp EEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGT---------------------TSCCCHHHHHHHHHHHHTHHH-HH
T ss_pred EeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhh---------------------ccCCCcHHHHHHHHHHhccHH-HH
Confidence 999999998777 799999999888776543221 124566666666677775444 36
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 343 QKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 343 ~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
++.+++..++.+++.+.|.+.+++
T Consensus 275 ~~~~~~~~~~~~~l~~~l~~~~~~ 298 (375)
T 3op7_A 275 ERNRHILEENLAILDQWIEEEPLV 298 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCc
Confidence 777788888899999998876553
No 102
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.94 E-value=1.5e-25 Score=213.15 Aligned_cols=257 Identities=16% Similarity=0.179 Sum_probs=195.3
Q ss_pred CCeEEeccCCCC--CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 66 KKLVYLDNAATS--QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 66 ~~~i~l~~~~~~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.+++|..+.+- +.++.+.+++.+.+..+....+ .+....+..+..+++++++++++|.+ ..++++++++++.
T Consensus 59 ~~~ld~~s~~~l~~~~~p~v~~a~~~~l~~~~~~~~--~~~~~~g~~~~~~~l~~~la~~~g~~---~~i~~~sGt~a~~ 133 (409)
T 3kki_A 59 PDDIILQSNDYLALANHPLIKARLAKSLLEEQQSLF--MSASFLQNDYDKPMIEKRLAKFTGFD---ECLLSQSGWNANV 133 (409)
T ss_dssp TTSEECCCSCTTCCTTCHHHHHHHHHHHHSCCCCCC--SBGGGGCSTTTSCHHHHHHHHHHTCS---EEEEESCHHHHHH
T ss_pred CceEEeeccCccCCcCCHHHHHHHHHHHHHcCCCCC--ccccccCCcHHHHHHHHHHHHHhCCC---eEEEecchHHHHH
Confidence 556666665432 3578999999998876432221 11222222345568999999999986 3455566689999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLA 222 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG 222 (368)
.++.++ +++||.|++.++.|++.... ++..|++++.++.. |+++|++++++ ++++|++++++||||
T Consensus 134 ~~l~~~----~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~-----d~~~le~~l~~~~~~~vi~~~~~nptG 200 (409)
T 3kki_A 134 GLLQTI----CQPNTNVYIDFFAHMSLWEG----ARYANAQAHPFMHN-----NCDHLRMLIQRHGPGIIVVDSIYSTLG 200 (409)
T ss_dssp HHHHHH----CCTTCEEEEETTSCHHHHHH----HHHTTCEEEEECTT-----CHHHHHHHHHHHCSCEEEEESBCTTTC
T ss_pred HHHHHh----cCCCCEEEECCCcCHHHHHH----HHHcCCeEEEecCC-----CHHHHHHHHHhcCCeEEEECCCCCCCC
Confidence 999988 89999999999999886544 34559999888763 89999999976 589999999999999
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCccc---------ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCc
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMV---------VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~---------~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~ 293 (368)
.+.|+++|.++|++||+++|+|++|+.+... .+. ..++|+++.|++|.+|+.| |++++++++++.+...
T Consensus 201 ~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~-~~~~di~~~s~sK~~~~~g-g~v~~~~~~~~~~~~~ 278 (409)
T 3kki_A 201 TIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGL-TREVHFMTASLAKTFAYRA-GAIWCNNEVNRCVPFI 278 (409)
T ss_dssp CBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTC-GGGCSEEEEESSSTTCSSC-EEEEESSSGGGTHHHH
T ss_pred CcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCC-CCCCCEEEeecchhhCCCc-eEEEECHHHHHHHHHh
Confidence 9999999999999999999999999865431 112 1257899999999998775 9999999988765532
Q ss_pred ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 294 LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 294 ~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...+ .+ .++.+...++++.++++.++.. +.++++..++.+++.+.|.+.
T Consensus 279 ~~~~------------------~~-~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 327 (409)
T 3kki_A 279 SYPA------------------IF-SSTLLPYEAAGLETTLEIIESA--DNRRQHLDRMARKLRIGLSQL 327 (409)
T ss_dssp CHHH------------------HH-SBCCCHHHHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHTT
T ss_pred CcCc------------------cc-cCCCcHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 2110 11 1246677778888888888764 778889999999999999876
No 103
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.94 E-value=1.7e-25 Score=207.19 Aligned_cols=245 Identities=13% Similarity=0.107 Sum_probs=189.5
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHcC---CCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFIN---ASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~---~~~~~~v~~t~g~t 139 (368)
+++++|+.+.++ ++++.+.+++.+.+.. ...++. ....++|+.++++++ .++ ++|++|+|++
T Consensus 19 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----------~~~~~lr~~la~~~~~~~~~~-~~v~~~~G~~ 86 (335)
T 1uu1_A 19 RDKTYLALNENPFPFPEDLVDEVFRRLNSDALRIYYD-----------SPDEELIEKILSYLDTDFLSK-NNVSVGNGAD 86 (335)
T ss_dssp CCSEEESSCCCSSCCCHHHHHHHHHTCCGGGGGSCCC-----------SSCHHHHHHHHHHHTCSSCCG-GGEEEESSHH
T ss_pred CcceECCCCCCCCCCCHHHHHHHHHHhhhhhhhcCCC-----------CchHHHHHHHHHHcCCCCCCH-HHEEEcCChH
Confidence 357999999886 5789999999887632 111111 124489999999999 665 4999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
+++..++.++ ||+|++. |+|++.. ..++..|++++.++.++++.+|+++| +++++|++++++|
T Consensus 87 ~al~~~~~~~-------gd~Vl~~-p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l-----~~~~~v~l~~p~n 149 (335)
T 1uu1_A 87 EIIYVMMLMF-------DRSVFFP-PTYSCYR----IFAKAVGAKFLEVPLTKDLRIPEVNV-----GEGDVVFIPNPNN 149 (335)
T ss_dssp HHHHHHHHHS-------SEEEECS-SSCHHHH----HHHHHHTCEEEECCCCTTSCCCCCCC-----CTTEEEEEESSCT
T ss_pred HHHHHHHHHh-------CCcEEEC-CCcHHHH----HHHHHcCCeEEEeccCCCCCCCHHHc-----CCCCEEEEeCCCC
Confidence 9999999864 8999999 9888744 44556699999999887777888776 5789999999999
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-c-cc-CCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-V-VD-VQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFL 294 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~-~~-~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~ 294 (368)
|||.++|.+++.++++.+| ++|+|++|+.... + ++ ++..+.+++++|+||.+|++| +|++++++++++.+.+..
T Consensus 150 ptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~ 228 (335)
T 1uu1_A 150 PTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVR 228 (335)
T ss_dssp TTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhc
Confidence 9999999999999999889 9999999983111 1 22 233457899999999999778 899999998877665332
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
. ..+.+.....++..+++... .++.++++.+++.+++.+.|.+. |+
T Consensus 229 ~-----------------------~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~ 274 (335)
T 1uu1_A 229 L-----------------------PFNVSYVSQMFAKVALDHRE--IFEERTKFIVEERERMKSALREM-GY 274 (335)
T ss_dssp C-----------------------TTCSCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred C-----------------------CCCcCHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHC-Cc
Confidence 1 12677777777777777522 36778888889999999999876 54
No 104
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.94 E-value=5.3e-26 Score=217.65 Aligned_cols=259 Identities=14% Similarity=0.137 Sum_probs=189.1
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHH------------HHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcC--------
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYY------------EAYNSNVHRGIHFLSAKATDEYELARKKVAAFIN-------- 125 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-------- 125 (368)
.+++.|+.+.....++.+.+++.+.. .....++.. ....++|+.++++++
T Consensus 36 ~~~i~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~----------~g~~~lr~~la~~~~~~~g~~~~ 105 (428)
T 1iay_A 36 NGVIQMGLAENQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDY----------HGLPEFRKAIAKFMEKTRGGRVR 105 (428)
T ss_dssp TSBEECSSCCCCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCT----------TCCHHHHHHHHHHHHHHTTTCSC
T ss_pred CceeeeccccchhhHHHHHHHHHhccccccccccccccHhhcCCCCC----------CCcHHHHHHHHHHHHHhcCCCCC
Confidence 46889988877766777887776431 111122211 113367888888876
Q ss_pred CCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHH
Q 017640 126 ASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKE 203 (368)
Q Consensus 126 ~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~ 203 (368)
.++ ++|++|+|+++++..++.++ +++||+|++.+|+|++.... ++...|++++.++.++ ++.+|+++|++
T Consensus 106 ~~~-~~i~~~~G~~~ai~~~~~~~----~~~gd~Vl~~~p~y~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 177 (428)
T 1iay_A 106 FDP-ERVVMAGGATGANETIIFCL----ADPGDAFLVPSPYYPAFNRD---LRWRTGVQLIPIHCESSNNFKITSKAVKE 177 (428)
T ss_dssp CCT-TSCEEEEHHHHHHHHHHHHH----CCTTCEEEEESSCCTTHHHH---TTTTTCCEEEEECCCTTTTTCCCHHHHHH
T ss_pred CCh-hhEEEccChHHHHHHHHHHh----CCCCCeEEEccCCCcchHHH---HHHhcCCEEEEeecCCccCCcCCHHHHHH
Confidence 444 48999999999999999998 78999999999999985432 2345699999999874 35789999999
Q ss_pred hccc------CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCC------CCc
Q 017640 204 MLSR------KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQG------LDA 261 (368)
Q Consensus 204 ~l~~------~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~------~~~ 261 (368)
++++ ++++|++++++||||.++| +++|.++|++||+++|+|++|+.... ++ .+.. .++
T Consensus 178 ~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (428)
T 1iay_A 178 AYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNK 257 (428)
T ss_dssp HHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCT
T ss_pred HHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCC
Confidence 8863 6899999999999999999 99999999999999999999984221 11 1111 124
Q ss_pred c--EEEecCcCcCCCCc--ceEEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 262 D--FLVASSHKMCGPTG--IGFLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 262 d--~~~~s~~K~~g~~G--~G~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
| +++.|+||.+|.+| +|++++ ++++++.++.... ..+.+..+..++..+++.
T Consensus 258 d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~a~~~~l~~ 314 (428)
T 1iay_A 258 DLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSS-----------------------FGLVSTQTQYFLAAMLSD 314 (428)
T ss_dssp TSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHT-----------------------TSCCCHHHHHHHHHHTTC
T ss_pred CcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHh-----------------------cccCCHHHHHHHHHHhcC
Confidence 5 88999999999888 699998 5667665542210 124566666666666654
Q ss_pred HH--HhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 337 LS--TIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 337 ~~--~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.. +..++.++++..++.+++.+.|.++ |+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 345 (428)
T 1iay_A 315 EKFVDNFLRESAMRLGKRHKHFTNGLEVV-GI 345 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CC
Confidence 32 1135678888889999999999876 54
No 105
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.94 E-value=1.2e-25 Score=213.54 Aligned_cols=216 Identities=19% Similarity=0.184 Sum_probs=168.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++++++++|.+ ++++++|+++|+..++.++ +++||+|++++|.|+++...+...++..|++++.++
T Consensus 61 ~~~~~~l~~~ia~~~g~~---~~i~~~~g~~ai~~~~~~l----~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 133 (404)
T 1e5e_A 61 NPTVSNLEGKIAFLEKTE---ACVATSSGMGAIAATVLTI----LKAGDHLISDECLYGCTHALFEHALTKFGIQVDFIN 133 (404)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHH----CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEeCChHHHHHHHHHHH----hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 456678999999999985 6777778889999999988 789999999999999987766666778899999999
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh-cCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD-VGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~-~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
.+ |+++|++++++++++|++++++||||.++|+++|.++|++ ||+++|+|++|+.+.....+ ..+.|+++.|+
T Consensus 134 ~~-----d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~S~ 207 (404)
T 1e5e_A 134 TA-----IPGEVKKHMKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPV-DFGVDVVVHSA 207 (404)
T ss_dssp TT-----STTHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGG-GGTCSEEEEET
T ss_pred CC-----CHHHHHHhcCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcc-ccCCEEEEEcC
Confidence 86 8899999999999999999999999999999999999999 99999999999977632112 35799999999
Q ss_pred cCcCCCCc---ceEEEEcccccc-cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHH
Q 017640 269 HKMCGPTG---IGFLFGKSDLLS-AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQK 344 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~~~~li~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~ 344 (368)
||++|.+| +|++++++++++ .+.+...++ ..++.+.....++..+++. ++.
T Consensus 208 sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~--------------------~g~~~~~~~~~~~~~~l~~-----~~~ 262 (404)
T 1e5e_A 208 TKYINGHTDVVAGLICGKADLLQQIRMVGIKDI--------------------TGSVISPHDAWLITRGLST-----LNI 262 (404)
T ss_dssp TTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCC--------------------CCCCCCHHHHHHHHHHHTT-----HHH
T ss_pred ccccCCCCCCeEEEEEECHHHHHHHHHHHHHhC--------------------CCCCCCHHHHHHHHHhHhH-----HHH
Confidence 99887665 499999998887 666544322 0113444444444445442 233
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 017640 345 IHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~ 363 (368)
..++..+.+..+.+.+++.
T Consensus 263 ~~~~~~~~~~~l~~~l~~~ 281 (404)
T 1e5e_A 263 RMKAESENAMKVAEYLKSH 281 (404)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 3444555666666666554
No 106
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.94 E-value=5.3e-25 Score=215.17 Aligned_cols=282 Identities=13% Similarity=0.069 Sum_probs=202.0
Q ss_pred EeccCCCCCCcHHHH-HHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCC-CCcEEEeCCHHHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVL-KALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASD-SGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~a~~~~~~ 147 (368)
|+++-..+..++.+. +.+...+. .+ ...+..++...++.+++++++++++|.+. ...++||+|+|+|+..++.
T Consensus 98 f~~~~~~~~~~~~~~~e~l~~~~~---~~--~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~ 172 (511)
T 3vp6_A 98 FFNQLSTGLDIIGLAGEWLTSTAN---TN--MFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIM 172 (511)
T ss_dssp EESSSSCCCCHHHHHHHHHHHHHC---CC--SSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHH
T ss_pred ceEeecCCCcHHHHHHHHHHHHhc---cC--CCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHH
Confidence 677655454444443 44444432 22 23445566778888899999999999984 2489999999999999888
Q ss_pred HccCCC----------CCCCCEEEEcCCCCcccHHHHHHHHHHcCC---EEEEEeCCCCCCCCHHHHHHhcccC------
Q 017640 148 SWGLSN----------LKSGDEVILTVAEHHSAIVPWQLVAQKTGA---NLKFLNLNDDESPDLDKLKEMLSRK------ 208 (368)
Q Consensus 148 ~~~~~~----------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~~------ 208 (368)
++.... ..+++.|+++...|+++. ..++..|. +++.|+.++++.+|+++|+++|+++
T Consensus 173 ~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~----~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~ 248 (511)
T 3vp6_A 173 AARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIK----KAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYV 248 (511)
T ss_dssp HHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHH----HHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHhhhhhhhcCcccCCCeEEEECCCchHHHH----HHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCC
Confidence 762110 015778999999999854 44556677 8999999989999999999999765
Q ss_pred ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-----CC-CCCccEEEecCcCcC-CCCcceEEE
Q 017640 209 TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-----VQ-GLDADFLVASSHKMC-GPTGIGFLF 281 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-----~~-~~~~d~~~~s~~K~~-g~~G~G~l~ 281 (368)
+++|++++++|+||.+.|+++|+++|++||+++++|++|+.+....+ +. ..+.|++++++||++ +|.|+|+++
T Consensus 249 ~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~ 328 (511)
T 3vp6_A 249 PFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL 328 (511)
T ss_dssp EEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred cEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEE
Confidence 89999999999999999999999999999999999999997766221 11 125799999999965 577899999
Q ss_pred Eccc-ccccC----CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 282 GKSD-LLSAM----PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 282 ~~~~-li~~l----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
++++ +++.. .+++.+........ +.......+.+.+ ...+++..+++.+...|++.+.++..++++++
T Consensus 329 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~-----~~~~~~~~~~~r~--~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l 401 (511)
T 3vp6_A 329 VKEKGILQGCNQMHASYLFQQDKHYDVS-----YDTGDKAIQCGRH--VDIFKFWLMWKAKGTVGFENQINKCLELAEYL 401 (511)
T ss_dssp ESSTTHHHHHHCCCCTTTCCSSCSSCGG-----GCCGGGSSCSSCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHhccCCccccCcccccccc-----cCccCCCCCCCCc--hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9775 33332 12222111100000 0001112222222 14566777888888888999999999999999
Q ss_pred HHHHHhhcCCC
Q 017640 357 IIVIQERHNTT 367 (368)
Q Consensus 357 ~~~l~~~~g~t 367 (368)
.+.|++++|++
T Consensus 402 ~~~L~~~pg~~ 412 (511)
T 3vp6_A 402 YAKIKNREEFE 412 (511)
T ss_dssp HHHHHSCTTEE
T ss_pred HHHHhcCCCEE
Confidence 99999887764
No 107
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.94 E-value=1.8e-25 Score=212.00 Aligned_cols=252 Identities=17% Similarity=0.123 Sum_probs=183.9
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
.+.+.++.+.....+.+.+++..+. ++. +.+..+....+..+++++++++++|.+ ++++++++++|+..++
T Consensus 26 ~~~~~d~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~l 96 (398)
T 2rfv_A 26 ALSTPIFQTSTFVFDSAEQGAARFA-----LEE-SGYIYTRLGNPTTDALEKKLAVLERGE---AGLATASGISAITTTL 96 (398)
T ss_dssp CSSCCCCCCSBCCCSSHHHHHHHC-----------CCSBTTTCCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHH
T ss_pred CcCCCCcCCCccccCCHHHHHHhhc-----CCC-CCCceeCCCChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHH
Confidence 3456677666666666666654211 111 112222223566778999999999986 5566666779999999
Q ss_pred HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccC
Q 017640 147 YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILP 226 (368)
Q Consensus 147 ~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~ 226 (368)
.++ +++||+|++.+++|+++...+...++..|.+++.++.+ |++++++++++++++|++++++||||.++|
T Consensus 97 ~~~----~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~ 167 (398)
T 2rfv_A 97 LTL----CQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-----KPEEIRAAMRPETKVVYIETPANPTLSLVD 167 (398)
T ss_dssp HHH----CCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-----SHHHHHHHCCTTEEEEEEESSBTTTTBCCC
T ss_pred HHH----hCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-----CHHHHHHhcCCCCeEEEEECCCCCCCcccC
Confidence 998 78999999999999998877766667789999999976 899999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCc---ceEEEEcccccc-cCCCcccCCcceee
Q 017640 227 IEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG---IGFLFGKSDLLS-AMPPFLGGGEMISD 302 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G---~G~l~~~~~li~-~l~~~~~g~~~~~~ 302 (368)
+++|.++|++||+++|+|++|+.+...... ..+.|+++.|+||+++.+| +|++++++++++ .+++...+.
T Consensus 168 l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~----- 241 (398)
T 2rfv_A 168 IETVAGIAHQQGALLVVDNTFMSPYCQQPL-QLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDI----- 241 (398)
T ss_dssp HHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHT-----
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCCch-hhCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhC-----
Confidence 999999999999999999999977653222 3579999999999886554 499999998876 454433211
Q ss_pred cccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 303 VFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 303 ~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
..++.+.....++..+++.+.. ..++..+....+.+.+.+
T Consensus 242 ---------------~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~l~~~l~~ 281 (398)
T 2rfv_A 242 ---------------TGGCMSPFNAWLTLRGVKTLGI-----RMERHCENALKIARFLEG 281 (398)
T ss_dssp ---------------TCCCCCHHHHHHHHHHHTTHHH-----HHHHHHHHHHHHHHHHHT
T ss_pred ---------------CCCCCCHHHHHHHHhhhhhHHH-----HHHHHHHHHHHHHHHHHc
Confidence 1235666666666666654322 223344455555555554
No 108
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.94 E-value=1.6e-25 Score=213.08 Aligned_cols=170 Identities=12% Similarity=0.132 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.+|+++|.+ ++++++|+++|+.+++.++ +++||+|+++++.|+++...+...++..|++++++
T Consensus 80 ~~p~~~~le~~lA~l~g~~---~~i~~ssGt~Ai~~al~~l----~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v 152 (415)
T 2fq6_A 80 GTLTHFSLQQAMCELEGGA---GCVLFPCGAAAVANSILAF----IEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWF 152 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTT----CCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEE
T ss_pred CCchHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHH----hCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEE
Confidence 3466778999999999985 4566788899999999987 78999999999999998877766667789999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh--cCCEEEEecCCcCCcccccCCCCCccEEEe
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHMVVDVQGLDADFLVA 266 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~~~~~~~~~~d~~~~ 266 (368)
+.+ |+++|++++++++++|++++++||||.+.|+++|.++|++ ||+++++|++|+.+.....+ .++.|++++
T Consensus 153 ~~~-----d~~~le~ai~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~-~~g~Div~~ 226 (415)
T 2fq6_A 153 DPL-----IGADIVKHLQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKAL-DFGIDVSIQ 226 (415)
T ss_dssp CTT-----CGGGGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGG-GGTCSEEEE
T ss_pred CCC-----CHHHHHHhhccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcc-ccCCeEEEE
Confidence 875 8999999999999999999999999999999999999999 99999999999965431112 357999999
Q ss_pred cCcCcCCCCc---ceEEEEcccccccCC
Q 017640 267 SSHKMCGPTG---IGFLFGKSDLLSAMP 291 (368)
Q Consensus 267 s~~K~~g~~G---~G~l~~~~~li~~l~ 291 (368)
|+||++|++| +|++++++++++.++
T Consensus 227 S~sK~lg~~g~~~~G~l~~~~~~~~~l~ 254 (415)
T 2fq6_A 227 AATKYLVGHSDAMIGTAVCNARCWEQLR 254 (415)
T ss_dssp ETTTTTTCSSSCCCEEEEECTTTHHHHH
T ss_pred eCccccCCCCCceEEEEEeCHHHHHHHH
Confidence 9999999877 699999988776554
No 109
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.94 E-value=1.1e-25 Score=215.89 Aligned_cols=267 Identities=15% Similarity=0.116 Sum_probs=186.8
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCC---cchhhHHHHHHHHHHHHHHHHHcC--------CCCCCcEEE
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRG---IHFLSAKATDEYELARKKVAAFIN--------ASDSGEIVF 134 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~r~~la~~~~--------~~~~~~v~~ 134 (368)
.+++.|+.+......+.+.+++.+............ ....++.......++|+.++++++ +++ ++|++
T Consensus 38 ~~~i~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~-~~v~~ 116 (435)
T 3piu_A 38 NGIIQMGLAENQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP-NHLVL 116 (435)
T ss_dssp TSBEECSSCCCCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG-GGEEE
T ss_pred CCeEEeccccccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH-HHEEE
Confidence 578999998888777777777765433211000000 000111112233578888888887 334 49999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhccc-----
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR----- 207 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~----- 207 (368)
|+|+++|+..++.++ .++||.|++.+|.|++....+. ...|++++.++++++ +.+|+++|++++++
T Consensus 117 ~~gg~~a~~~~~~~l----~~~gd~vl~~~p~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 189 (435)
T 3piu_A 117 TAGATSANETFIFCL----ADPGEAVLIPTPYYPGFDRDLK---WRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRN 189 (435)
T ss_dssp EEHHHHHHHHHHHHH----CCTTCEEEEEESCCTTHHHHTT---TTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTT
T ss_pred cCChHHHHHHHHHHh----cCCCCeEEECCCccccHHHHHH---HhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcC
Confidence 999999999999998 8899999999999998654322 146999999998753 56899999999976
Q ss_pred -CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc----cccC----CC---------CCccEEEe
Q 017640 208 -KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM----VVDV----QG---------LDADFLVA 266 (368)
Q Consensus 208 -~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~----~~~~----~~---------~~~d~~~~ 266 (368)
++++|++++++||||.++| +++|.++|++||+++|+|++|+.+.. .... .+ .+.+++++
T Consensus 190 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~ 269 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVY 269 (435)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEE
T ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEE
Confidence 7899999999999999999 57888899999999999999984221 1111 11 23448899
Q ss_pred cCcCcCCCCc--ceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--HhC
Q 017640 267 SSHKMCGPTG--IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS--TIG 341 (368)
Q Consensus 267 s~~K~~g~~G--~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~--~~g 341 (368)
|+||.+|.+| +|+++++ +++++.++.... .++.+.....++...++... +..
T Consensus 270 s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~~~~~~~~ 326 (435)
T 3piu_A 270 SLSKDLGLPGFRVGAIYSNDDMVVAAATKMSS-----------------------FGLVSSQTQHLLSAMLSDKKLTKNY 326 (435)
T ss_dssp ESSSSSCCGGGCEEEEEESCHHHHHHHHHHGG-----------------------GSCCCHHHHHHHHHHHHCHHHHHHH
T ss_pred eeecccCCCceeEEEEEeCCHHHHHHHHHHhh-----------------------cCCCCHHHHHHHHHHhcChHHHHHH
Confidence 9999999777 8999995 445444432110 11345555555555555322 113
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 017640 342 MQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++..+++..++.+++.+.|.+.
T Consensus 327 ~~~~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 327 IAENHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 5677788888888898888765
No 110
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.94 E-value=1.8e-25 Score=215.19 Aligned_cols=268 Identities=16% Similarity=0.118 Sum_probs=190.6
Q ss_pred CCCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEeCCHH
Q 017640 65 SKKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NASDSGEIVFTKNAT 139 (368)
Q Consensus 65 ~~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t 139 (368)
++++++|+.+..+ +.++.+.+++.+.+...........+ .......++|+++++++ +.+++ +|++|+|++
T Consensus 68 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y----~~~~g~~~lr~~ia~~~~~g~~~~~~-~i~~t~G~~ 142 (449)
T 3qgu_A 68 DAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREGYSGY----GAEQGQGALREAVASTFYGHAGRAAD-EIFISDGSK 142 (449)
T ss_dssp TCCCEECSSCCCCCCCCHHHHHHHHHHHHGGGGSCCCCCS----TTTTCCHHHHHHHHHHHHTTTTCCGG-GEEEESCHH
T ss_pred CCCEEEeeCCCCCCCCCHHHHHHHHHHHHhhccccCCCCC----CCCCCcHHHHHHHHHHHHcCCCCCHH-HEEEccCHH
Confidence 3678999999877 68899999999988865322111111 11233457899999988 55554 999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE----------EEEEeCCCC--CCCCHHHHHHhccc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN----------LKFLNLNDD--ESPDLDKLKEMLSR 207 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~----------v~~v~~~~~--~~~d~~~l~~~l~~ 207 (368)
+++..+ .++ +++||+|++.+|+|++.... ++..|.+ ++.++++++ ...|++++ +
T Consensus 143 ~al~~~-~~l----~~~gd~Vl~~~p~~~~~~~~----~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 208 (449)
T 3qgu_A 143 CDIARI-QMM----FGSKPTVAVQDPSYPVYVDT----SVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----K 208 (449)
T ss_dssp HHHHHH-HHH----HCSSSCEEEEESCCTHHHHH----HHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----C
T ss_pred HHHHHH-HHH----hCCCCEEEEcCCCChhHHHH----HHHcCCcccccccccceeEEEecccccCCcCChhHc-----C
Confidence 999998 777 78999999999999885543 4455888 999998754 33343321 5
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCC----cccccC---CC-CCccEEEecCcCcCCCCc
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVP----HMVVDV---QG-LDADFLVASSHKMCGPTG 276 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~----~~~~~~---~~-~~~d~~~~s~~K~~g~~G 276 (368)
++++|++++++||||.++| +++|+++|++||+++|+|++|+.. ..+..+ .. .+.++++.|+||.+|++|
T Consensus 209 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 288 (449)
T 3qgu_A 209 RTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTG 288 (449)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTT
T ss_pred CCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCcc
Confidence 7899999999999999998 778888899999999999999852 111222 11 356799999999998777
Q ss_pred --ceEEEEccccccc-CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 277 --IGFLFGKSDLLSA-MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 277 --~G~l~~~~~li~~-l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
+|++++++++++. ..+....+.. .......+.+.....++..+++......++.++++..++.
T Consensus 289 ~r~G~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 354 (449)
T 3qgu_A 289 VRLGWTVVPKALKYANGEPVHADWNR--------------VMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENA 354 (449)
T ss_dssp CCCEEEECCTTCBCTTSCBHHHHHHH--------------HHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred ceeEEEecCHHHHhhhhhhHHHHHHH--------------HhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence 8999999988763 0000000000 0011122566777777766666422234678888999999
Q ss_pred HHHHHHHHhhcCC
Q 017640 354 ICSIIVIQERHNT 366 (368)
Q Consensus 354 ~~l~~~l~~~~g~ 366 (368)
+++.+.|.+. |+
T Consensus 355 ~~l~~~L~~~-g~ 366 (449)
T 3qgu_A 355 QILKTTFTEM-GF 366 (449)
T ss_dssp HHHHHHHHHT-TC
T ss_pred HHHHHHHHHC-CC
Confidence 9999999876 44
No 111
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.94 E-value=7.2e-26 Score=214.71 Aligned_cols=265 Identities=17% Similarity=0.137 Sum_probs=192.3
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEE-eCCHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVF-TKNATEAINLVAY 147 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~-t~g~t~a~~~~~~ 147 (368)
++..+.+..++|+.+++++.++. +...+....+....+..+++|+.+++++|++++++|++ |+|+|+++.+++.
T Consensus 41 ~~~~~~~~~~~~~~v~~a~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~ 115 (398)
T 2fyf_A 41 DGRFGSGPSKVRLEQLQTLTTTA-----AALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAF 115 (398)
T ss_dssp SCBCCSSSCCCCHHHHHGGGTTT-----TTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHH
T ss_pred CccccCCCCCCCHHHHHHHhhcC-----CCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHH
Confidence 34555666788999999887631 01001112223446678899999999999985458998 9999999999999
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc--CCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccccccc
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASIL 225 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~--g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~ 225 (368)
++ +++| .+.+....|.. .+...+... |++++.++.+.+...+. .+++++++|++++++||||.++
T Consensus 116 ~l----~~~g-v~~v~~~~~~~---~~~~~~~~~~~g~~~~~v~~~~g~~~~~-----~i~~~~~~v~~~~~~nptG~~~ 182 (398)
T 2fyf_A 116 GL----IDKR-SLHLTYGEFSA---KFASAVSKNPFVGEPIIITSDPGSAPEP-----QTDPSVDVIAWAHNETSTGVAV 182 (398)
T ss_dssp HT----CSSC-EEEEECSHHHH---HHHHHHHHCTTSCCCEEEECCTTCCCCC-----CCCTTCSEEEEESEETTTTEEC
T ss_pred Hh----cCCC-eEEEeCCHHHH---HHHHHHHHhCCCCceEEEecCCCCCCCc-----cccCCCCEEEEeCcCCCcceec
Confidence 98 6777 33334443322 122234555 78889999873333232 2567899999999999999999
Q ss_pred CHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCC-cceEEEEcccccccCCC----------cc
Q 017640 226 PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLLSAMPP----------FL 294 (368)
Q Consensus 226 ~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-G~G~l~~~~~li~~l~~----------~~ 294 (368)
|+++|.++ +|+++|+|++|+.+..++++. ++|++++|+||++|++ |+|++++++++++.+++ +.
T Consensus 183 ~~~~i~~~---~~~~vivD~a~~~~~~~~~~~--~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~ 257 (398)
T 2fyf_A 183 AVRRPEGS---DDALVVIDATSGAGGLPVDIA--ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFL 257 (398)
T ss_dssp CCCCCTTC---C-CEEEEECTTTTTTSCCCGG--GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGG
T ss_pred chHHhhhh---cCCeEEEEeccccCCcccCcc--cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEE
Confidence 99988876 899999999999888776654 3899999999999877 59999999998876632 22
Q ss_pred cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 295 GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG-MQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 295 ~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g-~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.++..... + ...+..+|++..+++++..+++.+.+.| ++.+.++..++++++.+.|++++|+
T Consensus 258 ~~~~~~~~-------~---~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~ 320 (398)
T 2fyf_A 258 SLPIAVEN-------S---LKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYT 320 (398)
T ss_dssp CHHHHHHH-------H---TTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTE
T ss_pred ehHHHhhh-------c---ccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 11110000 0 0113346899999999999999888877 9999999999999999999987664
No 112
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.93 E-value=6.5e-25 Score=213.60 Aligned_cols=282 Identities=14% Similarity=0.054 Sum_probs=195.0
Q ss_pred EeccCCCCCCcH-HHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC--------CcEEEeCCHHH
Q 017640 70 YLDNAATSQKPI-AVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS--------GEIVFTKNATE 140 (368)
Q Consensus 70 ~l~~~~~~~~~~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~v~~t~g~t~ 140 (368)
|+++-..+..++ .+.+.+..++ +++...+..+....+..+++++++++++|.+.. ..+++|+|+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~-----n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTe 150 (486)
T 1js3_A 76 FFAYFPTASSYPAMLADMLCGAI-----GCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASE 150 (486)
T ss_dssp BCSSSCCCCCHHHHHHHHHHHHH-----CCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHH
T ss_pred ceEeCCCCCCHHHHHHHHHHHHh-----CcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHH
Confidence 666655444443 4555555554 233334445566778888899999999999742 36899999999
Q ss_pred HHHHHHHHccCCCCC-----CC---------C-EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 141 AINLVAYSWGLSNLK-----SG---------D-EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 141 a~~~~~~~~~~~~~~-----~g---------d-~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
|+.+++.+++...++ .| + .|+++++.|++ +...++..|++++.|++++++.+|+++|+++|
T Consensus 151 A~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s----~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i 226 (486)
T 1js3_A 151 ATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSS----VERAGLIGGVKLKAIPSDGKFAMRASALQEAL 226 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHH----HHHHHHHHTCEEEEECCCTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcHH----HHHHHHhCCCceEEeecCCCCCCCHHHHHHHH
Confidence 999998775210011 03 2 37889999988 44556667999999999888999999999999
Q ss_pred ccCc------eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-cCCC-----CCccEEEecCcCcCC
Q 017640 206 SRKT------KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DVQG-----LDADFLVASSHKMCG 273 (368)
Q Consensus 206 ~~~~------~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~~~-----~~~d~~~~s~~K~~g 273 (368)
++++ .+|++++++|+||.+.|+++|+++|++||+++++|++|+.+.... +... .+.|++++|+||+++
T Consensus 227 ~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~ 306 (486)
T 1js3_A 227 ERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLL 306 (486)
T ss_dssp HHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSS
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcC
Confidence 8765 389999999999999999999999999999999999999765432 1211 258999999999665
Q ss_pred -CCcceEEEEcccc--cccCC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 017640 274 -PTGIGFLFGKSDL--LSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (368)
Q Consensus 274 -~~G~G~l~~~~~l--i~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~ 347 (368)
|.|+|+++++++. .+.+. ++..+.+.......+... ...+.+.+. ..+++..+++.+...|++.+.+
T Consensus 307 ~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~-----~~~~~~rr~--~~~~~~~al~~~g~~g~~~~~~ 379 (486)
T 1js3_A 307 VNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRH-----WQLPLGRRF--RSLKMWFVFRMYGVKGLQAYIR 379 (486)
T ss_dssp CCSSCEEEEESCHHHHHGGGC------------CCSCCCGGG-----SSSCSCCCC--THHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccc-----cCCCCCCch--hHHHHHHHHHHHhHHHHHHHHH
Confidence 6789999998752 34442 222221110000000000 011111111 2456667777776678999999
Q ss_pred HHHHHHHHHHHHHHhhcCCC
Q 017640 348 YEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 348 ~~~~l~~~l~~~l~~~~g~t 367 (368)
+..++++++.+.|.+++|++
T Consensus 380 ~~~~~a~~l~~~L~~~~~~~ 399 (486)
T 1js3_A 380 KHVQLSHEFEAFVLQDPRFE 399 (486)
T ss_dssp HHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHHHHhcCCCeE
Confidence 99999999999999887754
No 113
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.93 E-value=5.9e-26 Score=215.40 Aligned_cols=266 Identities=16% Similarity=0.128 Sum_probs=192.7
Q ss_pred EeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH
Q 017640 70 YLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY 147 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~ 147 (368)
+++.++.++.++.+.+++.+.+.... .++....+.......+..+.+|+++++++|.++ ..++++++++++..++.
T Consensus 26 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~~--~~i~~~sGt~a~~~a~~ 103 (405)
T 2vi8_A 26 IELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEH--ANVQPHSGAQANMAVYF 103 (405)
T ss_dssp EECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHHHH
T ss_pred eeeccCcccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCc--eEEEecCcHHHHHHHHH
Confidence 45555556679999999988874211 222111111112334555568899999999873 44444455999999999
Q ss_pred HccCCCCCCCCEEEEcCCCCcccHHHHH--HHHHHcCCEEEEEeCC-CCCCCCHHHHHHhccc-CceEEEEccccccccc
Q 017640 148 SWGLSNLKSGDEVILTVAEHHSAIVPWQ--LVAQKTGANLKFLNLN-DDESPDLDKLKEMLSR-KTKLVVIHHISNMLAS 223 (368)
Q Consensus 148 ~~~~~~~~~gd~vl~~~~~~~s~~~~~~--~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~ 223 (368)
++ +++||+|++++++|++....+. ... ..+.+++.++++ .++.+|+++|++++++ ++++|+++ ++| .|.
T Consensus 104 ~~----~~~gd~Vl~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~-~~~-~~~ 176 (405)
T 2vi8_A 104 TV----LEHGDTVLGMNLSHGGHLTHGSPVNFS-GVQYNFVAYGVDPETHVIDYDDVREKARLHRPKLIVAA-AAA-YPR 176 (405)
T ss_dssp HH----CCTTCEEEEECGGGTCCTTTTCTTSHH-HHHSEEEEECBCTTTCSBCHHHHHHHHHHHCCSEEEEC-CSS-CCS
T ss_pred Hh----cCCCCEEEEecccccchhcccchhhhc-cceeEEEecccccccCCcCHHHHHHHHHhcCCeEEEEe-CCC-CCc
Confidence 98 7899999999999988643111 011 113478888875 5688999999999986 88888874 333 367
Q ss_pred ccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCC---CccEEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcc
Q 017640 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGL---DADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~---~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
..++++|.++|++||+++|+|++|+.+....+.... .+|++++|+||+++ +.| |++++++++++.+.+...
T Consensus 177 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~~---- 251 (405)
T 2vi8_A 177 IIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIF---- 251 (405)
T ss_dssp CCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHHT----
T ss_pred cCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhhc----
Confidence 778999999999999999999999965432222211 58899999999876 888 999999888776654321
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.+..++++..+++++.++++.+...+++.+.++..++.+++.+.|.++ |+
T Consensus 252 ----------------~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~ 301 (405)
T 2vi8_A 252 ----------------PGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GF 301 (405)
T ss_dssp ----------------TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred ----------------ccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 122357788888888889988776578899999999999999999876 54
No 114
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.93 E-value=3.8e-25 Score=211.84 Aligned_cols=176 Identities=18% Similarity=0.251 Sum_probs=149.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC
Q 017640 104 FLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA 183 (368)
Q Consensus 104 ~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 183 (368)
.++....+..+++++++++++|.+ +.+++++| ++|+..++.++ +++||+|+++++.|++++..+...++..|+
T Consensus 107 ~y~r~~~~~~~~l~~~lA~l~g~~--~~v~~~sG-~~Ai~~al~~l----~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~ 179 (445)
T 1qgn_A 107 EYGRYGNPTTVVLEEKISALEGAE--STLLMASG-MCASTVMLLAL----VPAGGHIVTTTDCYRKTRIFIETILPKMGI 179 (445)
T ss_dssp CBGGGCCHHHHHHHHHHHHHHTCS--EEEEESCH-HHHHHHHHHHH----SCSSCEEEEETTSCHHHHHHHHHTGGGGTC
T ss_pred cccCCCChHHHHHHHHHHHHhCCC--cEEEeCCH-HHHHHHHHHHH----hCCCCEEEEcCCCchhHHHHHHHHHHHcCC
Confidence 334444567789999999999986 25555555 59999999988 789999999999999977666656677899
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCcc
Q 017640 184 NLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDAD 262 (368)
Q Consensus 184 ~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d 262 (368)
++++++.+ |+++|++++++++ ++|++++++||||.+.|+++|.++|++||+++++|++|+.+... .....++|
T Consensus 180 ~v~~v~~~-----d~~~l~~ai~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~-~~~~~g~D 253 (445)
T 1qgn_A 180 TATVIDPA-----DVGALELALNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQ-KALALGAD 253 (445)
T ss_dssp EEEEECSS-----CHHHHHHHHHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-CTTTTTCS
T ss_pred EEEEeCCC-----CHHHHHHHhccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-CccccCCE
Confidence 99999876 8999999999999 99999999999999999999999999999999999999977542 23346899
Q ss_pred EEEecCcCcCCCCc---ceEEEEcccccccCCC
Q 017640 263 FLVASSHKMCGPTG---IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 263 ~~~~s~~K~~g~~G---~G~l~~~~~li~~l~~ 292 (368)
+++.|+||++|+.| +|++++++++++.+.+
T Consensus 254 iv~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~ 286 (445)
T 1qgn_A 254 LVLHSATKFLGGHNDVLAGCISGPLKLVSEIRN 286 (445)
T ss_dssp EEEECTTTTTTCSSSCCCEEEEECHHHHHHHHH
T ss_pred EEEECCcccccccccceEEEEEECHHHHHHHHH
Confidence 99999999999887 8999999988776653
No 115
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.93 E-value=9.4e-25 Score=201.72 Aligned_cols=168 Identities=18% Similarity=0.244 Sum_probs=142.7
Q ss_pred HHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCC
Q 017640 115 LARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDE 194 (368)
Q Consensus 115 ~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~ 194 (368)
++++.+++++|.+ +.+++++ +++|+..++.++ +++||+|++++++|++....+...++..|++++.++..
T Consensus 2 ~l~~~la~~~g~~--~~i~~~s-G~~a~~~~~~~~----~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--- 71 (331)
T 1pff_A 2 ALEGKIAKLEHAE--ACAATAS-GMGAIAASVWTF----LKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMA--- 71 (331)
T ss_dssp HHHHHHHHHHTCS--EEEEESS-HHHHHHHHHHHH----CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT---
T ss_pred hHHHHHHHHhCCC--eEEEeCC-hHHHHHHHHHHh----cCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCC---
Confidence 6899999999986 2555544 589999999988 78999999999999998777666566789999999873
Q ss_pred CCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh-cCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCC
Q 017640 195 SPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD-VGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCG 273 (368)
Q Consensus 195 ~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~-~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g 273 (368)
|++++++++++++++|++++++||||.++|+++|.++|++ ||+++|+|++|+.+....+. ..+.|++++|+||++|
T Consensus 72 --d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~d~~~~s~~K~~~ 148 (331)
T 1pff_A 72 --VPGNIEKHLKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DLGVDIVVHSATKYIN 148 (331)
T ss_dssp --STTHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTS
T ss_pred --CHHHHHHhhcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hcCCcEEEEECccccC
Confidence 8899999999999999999999999999999999999999 99999999999976643333 4579999999999877
Q ss_pred CCc---ceEEEEcc-cccccCCCccc
Q 017640 274 PTG---IGFLFGKS-DLLSAMPPFLG 295 (368)
Q Consensus 274 ~~G---~G~l~~~~-~li~~l~~~~~ 295 (368)
.+| +|++++++ ++++.+++...
T Consensus 149 ~~~~r~~G~~~~~~~~~~~~l~~~~~ 174 (331)
T 1pff_A 149 GHTDVVAGLVCSRADIIAKVKSQGIK 174 (331)
T ss_dssp SSSSCCCEEEEECHHHHHHHHHTCCC
T ss_pred CCCCceEEEEEeCcHHHHHHHHHHHH
Confidence 544 78999998 88877766544
No 116
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.93 E-value=4.8e-25 Score=208.70 Aligned_cols=170 Identities=22% Similarity=0.227 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++.+++++|.+ ++++++|+++|+..++.++ +++||+|++.+++|+++...+....+..|.+++++
T Consensus 64 ~~~~~~~l~~~la~~~g~~---~~~~~~sGt~A~~~al~~~----~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 136 (392)
T 3qhx_A 64 GNPTRTALEAALAAVEDAA---FGRAFSSGMAAADCALRAM----LRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPV 136 (392)
T ss_dssp CCHHHHHHHHHHHHHTTCS---EEEEESSHHHHHHHHHHHH----CCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred CChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEe
Confidence 3456778999999999986 6889999999999999988 88999999999999998877766667889999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.+ |+++|++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.. .+....++|+++.|+
T Consensus 137 ~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-~~~~~~~~di~~~S~ 210 (392)
T 3qhx_A 137 ALA-----DLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-QQPLSLGADVVLHST 210 (392)
T ss_dssp CTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-CCGGGGTCSEEEEET
T ss_pred CCC-----CHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-CChHHhCCcEEEEcC
Confidence 986 89999999999999999999999999999999999999999999999999986643 233356799999999
Q ss_pred cCcCCCCc---ceEEEEcc-cccccCC
Q 017640 269 HKMCGPTG---IGFLFGKS-DLLSAMP 291 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~~~-~li~~l~ 291 (368)
||.+|++| +|+++.++ ++++.++
T Consensus 211 sK~lg~~g~~~~G~v~~~~~~~~~~l~ 237 (392)
T 3qhx_A 211 TKYIGGHSDVVGGALVTNDEELDQSFA 237 (392)
T ss_dssp TTTTTCSSCCCCEEEEESCHHHHHHHH
T ss_pred ccccCCCCCceEEEEEECcHHHHHHHH
Confidence 99998876 89999984 6665554
No 117
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.93 E-value=3.5e-25 Score=206.23 Aligned_cols=246 Identities=13% Similarity=0.137 Sum_probs=183.2
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
+.++.|..+.+. ++++.+.+++.+.+.....++... ..++|+++++++|.+++ +|++|+|+++++.+
T Consensus 15 ~~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~~~~-----------~~~lr~~la~~~~~~~~-~i~~t~g~~~al~~ 82 (350)
T 3fkd_A 15 SEIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYPEPD-----------AGTLRQMLAKRNSVDNN-AILVTNGPTAAFYQ 82 (350)
T ss_dssp -CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCCCTT-----------CHHHHHHHHHHTTCCGG-GEEEESHHHHHHHH
T ss_pred ccEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCCCCc-----------HHHHHHHHHHHhCcCHH-HEEEcCCHHHHHHH
Confidence 567888888655 678899999988775444333211 13799999999998765 99999999999999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CCCCCCCHHHHHHhcccCceEEEEccccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-NDDESPDLDKLKEMLSRKTKLVVIHHISNMLAS 223 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~ 223 (368)
++.++ . ||+|++.+|+|++. ...++..|++++.++. ++++.+++ +++++|++++++||||.
T Consensus 83 ~~~~l----~--gd~Vi~~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~~~--------~~~~~v~i~~p~nptG~ 144 (350)
T 3fkd_A 83 IAQAF----R--GSRSLIAIPSFAEY----EDACRMYEHEVCFYPSNEDIGEADF--------SNMDFCWLCNPNNPDGR 144 (350)
T ss_dssp HHHHT----T--TCEEEEEESCCHHH----HHHHHHTTCEEEEEETTSCGGGSCC--------TTCSEEEEESSCTTTCC
T ss_pred HHHHH----C--CCEEEEeCCCcHHH----HHHHHHcCCeEEEEecCCccccCcc--------CCCCEEEEeCCCCCcCC
Confidence 99987 4 99999999988874 4455667999999998 65343443 57899999999999999
Q ss_pred ccCHHHHHHHHHhcC-CEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCccc
Q 017640 224 ILPIEEIVHWSHDVG-AKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g-~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~ 295 (368)
++|+++|.++++.++ .++|+|++|+.... ....+..+.+++++|+||.+|++| +|++++++++++.+.....
T Consensus 145 ~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 224 (350)
T 3fkd_A 145 LLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFST 224 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhCC
Confidence 999999999998876 79999999984322 112334467799999999998666 8999999888877664431
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
..+++.....++..+++..... .+.++++. ++.+++.+.|.+++|+
T Consensus 225 -----------------------~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~-~~~~~l~~~L~~~~~~ 270 (350)
T 3fkd_A 225 -----------------------PWAVNALAIEAAKFILIHPAQF-TLPIRKWQ-RNTVDFITALNRLDGV 270 (350)
T ss_dssp -----------------------TTCSCHHHHHHHHHHHHCTTTT-CCCHHHHH-HHHHHHHHHHHHSTTE
T ss_pred -----------------------CCCCCHHHHHHHHHHHhCHHHH-HHHHHHHH-HHHHHHHHHHhcCCCc
Confidence 1256666666666666533211 33444444 7888888888877664
No 118
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.93 E-value=3.2e-25 Score=212.46 Aligned_cols=263 Identities=13% Similarity=0.131 Sum_probs=183.4
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCCCCCcEEEeCCHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NASDSGEIVFTKNATE 140 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~t~g~t~ 140 (368)
+++++|+.+.+. +.++.+.+++.+.+..+........+ .......++++++++++ +.++ ++|++|+|+++
T Consensus 56 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y----~~~~g~~~l~~~ia~~~~~~~~~~~-~~i~~t~G~~~ 130 (432)
T 3ei9_A 56 AQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGY----GAEQGAKPLRAAIAKTFYGGLGIGD-DDVFVSDGAKC 130 (432)
T ss_dssp CCCEECSSCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCC----CCTTCCHHHHHHHHHHHHTTTTCCG-GGEEEESCHHH
T ss_pred CCeEEccCCCCCCCCCHHHHHHHHHHHhcccccCCccCC----CCCCCCHHHHHHHHHHHHccCCCCc-ceEEECCChHH
Confidence 578999999877 78999999999998864321111111 11122346788888876 6655 49999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC---------CEEEEEeCCCC--CCCCHHHHHHhcccCc
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG---------ANLKFLNLNDD--ESPDLDKLKEMLSRKT 209 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g---------~~v~~v~~~~~--~~~d~~~l~~~l~~~~ 209 (368)
++..+ ..+ +++||.|++.+|+|++....+... ...+ .+++.++++++ ...|++. .+++
T Consensus 131 al~~l-~~l----~~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~ 199 (432)
T 3ei9_A 131 DISRL-QVM----FGSNVTIAVQDPSYPAYVDSSVIM-GQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----VGRT 199 (432)
T ss_dssp HHHHH-HHH----HCTTCCEEEEESCCTHHHHHHHHH-TCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----CCCC
T ss_pred HHHHH-HHH----cCCCCEEEEeCCCCHHHHHHHHHc-CCcccccccccccCceEEeccCcccCCcCChhh-----CCCC
Confidence 99975 556 689999999999999866544332 1111 36788888743 3344332 3578
Q ss_pred eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc---cccc---CC-CCCccEEEecCcCcCCCCc--c
Q 017640 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH---MVVD---VQ-GLDADFLVASSHKMCGPTG--I 277 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~---~~~~---~~-~~~~d~~~~s~~K~~g~~G--~ 277 (368)
++|++++++||||.++| +++|+++|++||+++|+|++|+... .+.. +. ..+.+++++|+||.||++| +
T Consensus 200 ~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~ 279 (432)
T 3ei9_A 200 DIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFTGVRL 279 (432)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTTTTCC
T ss_pred CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCcccce
Confidence 99999999999999998 6677777999999999999998321 1111 11 1246799999999999888 8
Q ss_pred eEEEEccccc--------ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 278 GFLFGKSDLL--------SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 278 G~l~~~~~li--------~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
|+++++++++ +.+.... ....++++..++.++.+++.......++.++++.
T Consensus 280 G~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 338 (432)
T 3ei9_A 280 GWTVIPKKLLYSDGFPVAKDFNRII---------------------CTCFNGASNISQAGALACLTPEGLEAMHKVIGFY 338 (432)
T ss_dssp EEEECCTTCBCTTSCBHHHHHHHHH---------------------HHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHH
T ss_pred EEEEEChHHhhcchHHHHHHHHHHh---------------------ccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 9999998873 2222111 1112356777777666666422112367888899
Q ss_pred HHHHHHHHHHHHhhcCC
Q 017640 350 VKWIICSIIVIQERHNT 366 (368)
Q Consensus 350 ~~l~~~l~~~l~~~~g~ 366 (368)
.++.+++.+.|.+. |+
T Consensus 339 ~~~~~~l~~~L~~~-g~ 354 (432)
T 3ei9_A 339 KENTNIIIDTFTSL-GY 354 (432)
T ss_dssp HHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHC-Cc
Confidence 99999999999876 54
No 119
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.93 E-value=4.8e-25 Score=209.15 Aligned_cols=251 Identities=18% Similarity=0.177 Sum_probs=174.0
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYS 148 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~ 148 (368)
...++.+.....+.+.+++..+ .++. +.+..+....+..+++++.+++++|.+ +.++++|+++|+..++.+
T Consensus 29 ~~p~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~r~~~~~~~~l~~~la~~~g~~---~~i~~~sG~~a~~~~l~~ 99 (398)
T 1gc0_A 29 VPPVYQTATFTFPTVEYGAACF-----AGEQ-AGHFYSRISNPTLNLLEARMASLEGGE---AGLALASGMGAITSTLWT 99 (398)
T ss_dssp SCCBCCCSCBCCC---------------------------CCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHH
T ss_pred CCCccCCCccccCCHHHHHHhh-----cCCc-CCCcccCCCChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHH
Confidence 3445555555555555554321 1221 122233334567789999999999986 455666668999999999
Q ss_pred ccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 149 WGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 149 ~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
+ +++||+|++++++|+++...+...++..|.+++.++.+ |++++++++++++++|++++++||||.+.|++
T Consensus 100 ~----~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~ 170 (398)
T 1gc0_A 100 L----LRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA-----DLQALEAAMTPATRVIYFESPANPNMHMADIA 170 (398)
T ss_dssp H----CCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred H----hcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-----CHHHHHHhcCCCCeEEEEECCCCCCcccccHH
Confidence 8 78999999999999998877766667789999999875 89999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCcCcCCCCc---ceEEEEcccccc-cCCCcccCCcceeecc
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTG---IGFLFGKSDLLS-AMPPFLGGGEMISDVF 304 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~G---~G~l~~~~~li~-~l~~~~~g~~~~~~~~ 304 (368)
+|.++|++||+++|+|++|+.+.....+ ..+.|+++.|+||++|.+| +|+++++++.++ .+++...+
T Consensus 171 ~i~~l~~~~~~~li~D~~~~~~~~~~~~-~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~-------- 241 (398)
T 1gc0_A 171 GVAKIARKHGATVVVDNTYCTPYLQRPL-ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD-------- 241 (398)
T ss_dssp HHHHHHGGGTCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH--------
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCch-hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhc--------
Confidence 9999999999999999999966543222 3579999999999888554 599999987665 34433221
Q ss_pred cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 305 LDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 305 ~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+..++.+....+++..+++.+ ....++..+.+..+.+.|.++
T Consensus 242 ------------~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~ 283 (398)
T 1gc0_A 242 ------------MTGAVLSPHDAALLMRGIKTL-----NLRMDRHCANAQVLAEFLARQ 283 (398)
T ss_dssp ------------HTCCCCCHHHHHHHHHHHTTH-----HHHHHHHHHHHHHHHHHHHTC
T ss_pred ------------cCCCCCCHHHHHHHHhccchH-----HHHHHHHHHHHHHHHHHHhcC
Confidence 012356665555555555433 333445555566666666553
No 120
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.93 E-value=6.8e-25 Score=208.12 Aligned_cols=265 Identities=14% Similarity=0.081 Sum_probs=183.3
Q ss_pred CCeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHH--cC-CCCCCcEEEeCCHHHH
Q 017640 66 KKLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAF--IN-ASDSGEIVFTKNATEA 141 (368)
Q Consensus 66 ~~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~--~~-~~~~~~v~~t~g~t~a 141 (368)
+++++|+.+..+ ++++.+.+++.+.+...........+. ......++|++++++ .| .++ ++|++|+|++++
T Consensus 33 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~----~~~g~~~lr~~la~~l~~g~~~~-~~v~~~~G~~~a 107 (400)
T 3asa_A 33 HTVINLSIGDTTQPLNASVAEAFASSIARLSSPTTCRGYG----PDFGLPALRQKLSEDFYRGFVDA-KEIFISDGAKVD 107 (400)
T ss_dssp SCCEECSSCCCCCCCCHHHHHHHHHHHHHHTSSSCCCCCC----CTTCCHHHHHHHHHTTSTTSSCG-GGEEEESCHHHH
T ss_pred CceEeccCCCCCCCCCHHHHHHHHHHHhcccccccccCCC----CCCCCHHHHHHHHHHHHcCCCCH-HHEEEccChHHH
Confidence 678999999876 678899999999887642211101111 112345799999999 46 444 499999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE-EEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN-LKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNM 220 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~-v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~ 220 (368)
+..++. + +++||+|++.+|+|++.. ..++..|.+ ++.++.++++.++.+ +++ + +++++|++++++||
T Consensus 108 l~~~~~-~----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~-l~~-~-~~~~~v~l~~p~np 175 (400)
T 3asa_A 108 LFRLLS-F----FGPNQTVAIQDPSYPAYL----DIARLTGAKEIIALPCLQENAFFPE-FPE-D-THIDILCLCSPNNP 175 (400)
T ss_dssp HHHHHH-H----HCSSCEEEEEESCCHHHH----HHHHHTTCSEEEEEECCGGGTTCCC-CCT-T-CCCSEEEEESSCTT
T ss_pred HHHHHH-H----cCCCCEEEECCCCcHHHH----HHHHHcCCcceEecccchhcCcccC-hhh-c-cCccEEEEeCCCCC
Confidence 999764 3 468999999999888744 345566888 999998754222211 222 1 57899999999999
Q ss_pred cccccC---HHHHHHHHHhcCCEEEEecCCc-C---CcccccCCCC----CccEEEecCcCcCCCCc--ceEEEEccccc
Q 017640 221 LASILP---IEEIVHWSHDVGAKVLVDACQS-V---PHMVVDVQGL----DADFLVASSHKMCGPTG--IGFLFGKSDLL 287 (368)
Q Consensus 221 tG~~~~---l~~i~~l~~~~g~~li~D~a~~-~---~~~~~~~~~~----~~d~~~~s~~K~~g~~G--~G~l~~~~~li 287 (368)
||.++| +++|.++|+++|+++|+|++|+ + +..+.++... +.+++++|+||.+|++| +|++++++++.
T Consensus 176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~ 255 (400)
T 3asa_A 176 TGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELT 255 (400)
T ss_dssp TCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCB
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhc
Confidence 999999 6678899999999999999998 3 2212223222 34688999999999888 89999998874
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+... ........ .......++.+.....++..+++.. .++.++++.+++.+++.+.|.+.
T Consensus 256 ~~~~------~~~~~~~~-------~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~ 315 (400)
T 3asa_A 256 YADG------HFVIQDWE-------RFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT 315 (400)
T ss_dssp CTTS------CBHHHHHH-------HHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT
T ss_pred cchh------hhHHHHHH-------HHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC
Confidence 2211 00000000 0000112356777777776666532 46788889999999999999875
No 121
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.93 E-value=5.3e-25 Score=206.68 Aligned_cols=244 Identities=16% Similarity=0.161 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEE
Q 017640 83 VLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVIL 162 (368)
Q Consensus 83 v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~ 162 (368)
+.+++.+.+....- . ..+...++|+.++++++.+ ++++++|+|+|+..++.++ .+++||+|++
T Consensus 21 ~~~~~~~~~~~~~~-------~----~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~~~~~~~---~~~~gd~v~~ 83 (374)
T 3uwc_A 21 YLNDLREFIKTADF-------T----LGAELEKFEKRFAALHNAP---HAIGVGTGTDALAMSFKML---NIGAGDEVIT 83 (374)
T ss_dssp HHHHHHHHHHHTCC-------S----SCHHHHHHHHHHHHHTTCS---EEEEESCHHHHHHHHHHHT---TCCTTCEEEE
T ss_pred HHHHHHHHHHcCCc-------c----cChhHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHc---CCCCCCEEEE
Confidence 88888777664211 1 1345668999999999986 7899999999999999987 3789999999
Q ss_pred cCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 163 TVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 163 ~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
++++|++... .++..|++++.++.++++.+|++++++++++++++|+ ++||||.+.|+++|.++|++||+++|
T Consensus 84 ~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li 156 (374)
T 3uwc_A 84 CANTFIASVG----AIVQAGATPVLVDSENGYVIDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIV 156 (374)
T ss_dssp ESSSCHHHHH----HHHHTTCEEEEECBCTTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEE
T ss_pred CCCccHHHHH----HHHHcCCEEEEEecCCCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEE
Confidence 9999998654 3456799999999987888999999999998888887 78899999999999999999999999
Q ss_pred EecCCcCCcccccCCCCC--ccEEEecCc--CcCCCCc-ceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCC
Q 017640 243 VDACQSVPHMVVDVQGLD--ADFLVASSH--KMCGPTG-IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSR 316 (368)
Q Consensus 243 ~D~a~~~~~~~~~~~~~~--~d~~~~s~~--K~~g~~G-~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (368)
+|++|+.+.. ++....+ .|+++.|+| |++|+.| +|+++.++ ++.+.+++...++..... .
T Consensus 157 ~D~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 222 (374)
T 3uwc_A 157 EDACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRD-------------V 222 (374)
T ss_dssp EECTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETT-------------E
T ss_pred EeCCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccC-------------c
Confidence 9999998765 3333333 699999977 9888855 78888765 455555544333222100 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 317 FEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 317 ~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
....+.+. .+..+.+++......+++.+.++..++.+++.+.|.++.+
T Consensus 223 ~~~~~~~~-~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 270 (374)
T 3uwc_A 223 CVEYGINC-RMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSE 270 (374)
T ss_dssp ESSCCCBC-BCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTT
T ss_pred cccccccC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 00001111 1223444444445556788889999999999999988765
No 122
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.93 E-value=4.9e-26 Score=218.01 Aligned_cols=258 Identities=14% Similarity=0.097 Sum_probs=191.0
Q ss_pred CCeEEeccCCC-C-CCcHHH--HHHHHHHHHH--hhccCCCCcchhhHHHHHHHHHHHHHHHHHc-----CCCCCCc---
Q 017640 66 KKLVYLDNAAT-S-QKPIAV--LKALQNYYEA--YNSNVHRGIHFLSAKATDEYELARKKVAAFI-----NASDSGE--- 131 (368)
Q Consensus 66 ~~~i~l~~~~~-~-~~~~~v--~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-----~~~~~~~--- 131 (368)
++++.|..+.+ . ..++.+ .+++.+.+.. ...++. .....++|+.+++++ +.+++ +
T Consensus 47 ~~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~----------~~g~~~lr~~ia~~~~~~~~~~~~~-~~~~ 115 (430)
T 2x5f_A 47 STTYNATIGMATNKDGKMFASSLDAMFNDLTPDEIFPYAP----------PQGIEELRDLWQQKMLRDNPELSID-NMSR 115 (430)
T ss_dssp TCSEECCCSSCEETTEECCCHHHHTTBSSCCGGGTSSCCC----------TTCCHHHHHHHHHHHHHHCTTCCGG-GBCC
T ss_pred CCcEEeeeeeccCCCCchhhHHHHHHHHhcCcccccccCC----------CCCCHHHHHHHHHHHhccCcccCCC-ccce
Confidence 45678888766 3 234444 5555444322 111111 122347888888888 77654 7
Q ss_pred EEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH-cCCEEEEEeCCC-CCCCCHHHHHHhccc--
Q 017640 132 IVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK-TGANLKFLNLND-DESPDLDKLKEMLSR-- 207 (368)
Q Consensus 132 v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~-~g~~v~~v~~~~-~~~~d~~~l~~~l~~-- 207 (368)
|++|+|+++|+..++.++ +++||+|++.+|+|++.. ..++. .|++++.++.++ ++.+|+++|++++++
T Consensus 116 i~~t~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 187 (430)
T 2x5f_A 116 PIVTNALTHGLSLVGDLF----VNQDDTILLPEHNWGNYK----LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYN 187 (430)
T ss_dssp CEEESHHHHHHHHHHHHH----CCTTCEEEEESSCCTHHH----HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCC
T ss_pred EEEcCCchHHHHHHHHHH----hCCCCEEEEcCCcCccHH----HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcC
Confidence 999999999999999998 789999999999998843 44556 799999999875 467899999999987
Q ss_pred -CceEEEEcccccccccccC---HHHHHHHHHh-----cCCEEEEecCCcCCcc------cc--cCCC-CCc---cEEEe
Q 017640 208 -KTKLVVIHHISNMLASILP---IEEIVHWSHD-----VGAKVLVDACQSVPHM------VV--DVQG-LDA---DFLVA 266 (368)
Q Consensus 208 -~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~-----~g~~li~D~a~~~~~~------~~--~~~~-~~~---d~~~~ 266 (368)
+++++++++|+||||.++| +++|.++|++ ||+++|+|++|+.... ++ ++.. .+. +++++
T Consensus 188 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (430)
T 2x5f_A 188 KDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLD 267 (430)
T ss_dssp SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEE
T ss_pred CCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEE
Confidence 7899999999999999999 8899999999 9999999999984321 21 2222 345 78899
Q ss_pred cCcCcCCCCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HH
Q 017640 267 SSHKMCGPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID----YL 337 (368)
Q Consensus 267 s~~K~~g~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~----~~ 337 (368)
|+||.+|++| +|++++ ++++++.+....... .+....+++.....++..+++ +.
T Consensus 268 s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~a~~~~l~~~~~~~ 330 (430)
T 2x5f_A 268 GATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGL-----------------IRSNISSGPLPTQSAVKHVLKNNKQFD 330 (430)
T ss_dssp EHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHH-----------------HHTTTSSCCHHHHHHHHHHHHSCHHHH
T ss_pred ecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhh-----------------hhcccCCCChHHHHHHHHHHccChHHH
Confidence 9999999778 799999 888877765432110 011233678888888888887 33
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHH
Q 017640 338 STIGMQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 338 ~~~g~~~i~~~~~~l~~~l~~~l~ 361 (368)
+. ++.++++..++.+++.+.|.
T Consensus 331 ~~--~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 331 KE--IEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHT
T ss_pred HH--HHHHHHHHHHHHHHHHHHHH
Confidence 32 56688888889999999887
No 123
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.93 E-value=1.5e-24 Score=207.39 Aligned_cols=225 Identities=13% Similarity=0.131 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHcCCCC--------CCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc
Q 017640 110 TDEYELARKKVAAFINASD--------SGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT 181 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~--------~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~ 181 (368)
.+..+.+.+.+++.+|.+. +++|++|+|+++++.+++.++ +++||+|++.+|+|++. ...++..
T Consensus 81 ~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l----~~~gd~Vlv~~p~y~~~----~~~~~~~ 152 (425)
T 2r2n_A 81 PELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMI----INPGDNVLLDEPAYSGT----LQSLHPL 152 (425)
T ss_dssp HHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHH----CCTTCEEEEESSCCHHH----HHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHh----CCCCCEEEEeCCCcHHH----HHHHHHc
Confidence 3444555666666668764 248999999999999999998 88999999999988874 4456677
Q ss_pred CCEEEEEeCCCCCCCCHHHHHHhcc------------cCceEEEE-cccccccccccCH---HHHHHHHHhcCCEEEEec
Q 017640 182 GANLKFLNLNDDESPDLDKLKEMLS------------RKTKLVVI-HHISNMLASILPI---EEIVHWSHDVGAKVLVDA 245 (368)
Q Consensus 182 g~~v~~v~~~~~~~~d~~~l~~~l~------------~~~~~v~~-~~~~n~tG~~~~l---~~i~~l~~~~g~~li~D~ 245 (368)
|++++.++.++++ +|+++|+++++ +++++|++ ++++||||.++|. ++|.++|++||+++|+|+
T Consensus 153 g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De 231 (425)
T 2r2n_A 153 GCNIINVASDESG-IVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDD 231 (425)
T ss_dssp TCEEEEECEETTE-ECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEeCcCCCC-CCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 9999999987654 79999999886 35788765 7999999999995 499999999999999999
Q ss_pred CCcC----Ccccc---cCCCCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCC
Q 017640 246 CQSV----PHMVV---DVQGLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSR 316 (368)
Q Consensus 246 a~~~----~~~~~---~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~ 316 (368)
+|+. +.... .++..+.+++++|+||.+| +| +||+++++++++.+......
T Consensus 232 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~~~~~~-------------------- 290 (425)
T 2r2n_A 232 PYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPKPLIERVILHIQV-------------------- 290 (425)
T ss_dssp TTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEHHHHHHHHHHHHT--------------------
T ss_pred CcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCHHHHHHHHHHHHH--------------------
Confidence 9972 22111 2233356799999999998 77 89999999988776543221
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHH----hCHHHHHHHHHHHHHHHHHHHHhh-cC
Q 017640 317 FEAGTPAIGEAIGLGAAIDYLST----IGMQKIHAYEVKWIICSIIVIQER-HN 365 (368)
Q Consensus 317 ~~~gt~~~~~~~a~~~al~~~~~----~g~~~i~~~~~~l~~~l~~~l~~~-~g 365 (368)
...+.+.....++..+++.+.+ ..++.++++.++..+++.+.|.+. +|
T Consensus 291 -~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 343 (425)
T 2r2n_A 291 -STLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTG 343 (425)
T ss_dssp -TTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred -hcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 1236677777777777775321 125677788888888888888874 44
No 124
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.93 E-value=7.8e-25 Score=213.63 Aligned_cols=252 Identities=14% Similarity=0.111 Sum_probs=180.6
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCC-CCCcEEEeCCHHHHHHHHHHHccCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----NAS-DSGEIVFTKNATEAINLVAYSWGLSN 153 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~ 153 (368)
.|..++++..+.+...... ....+.... ...++|+.+++++ |.+ .+++|++|+|+++++..++.++
T Consensus 107 ~p~~~~~~a~~~l~~~~~~-~~~~Y~~~~----G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l---- 177 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGR-ATGAYSHSQ----GIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLL---- 177 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTS-CSSSCCCTT----CCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHH----
T ss_pred CCHHHHHHHHHHHHcCCCC-cCCCcCCCc----ChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHH----
Confidence 5556666666655543110 111222222 2234555555554 432 2249999999999999999998
Q ss_pred C-CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhccc------CceEEEEcccccccccc
Q 017640 154 L-KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR------KTKLVVIHHISNMLASI 224 (368)
Q Consensus 154 ~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~ 224 (368)
+ ++||+|++++|+|++. ...++..|++++.++++++ +.+|+++|++++++ ++++|++++++||||.+
T Consensus 178 ~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~ 253 (500)
T 3tcm_A 178 IRNEKDGILVPIPQYPLY----SASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQV 253 (500)
T ss_dssp CCSTTEEEEEEESCCTHH----HHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCC
T ss_pred cCCCCCEEEEeCCCcHhH----HHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCccc
Confidence 6 7999999999999874 4445667999999998865 58899999999976 78999999999999999
Q ss_pred cC---HHHHHHHHHhcCCEEEEecCCcCCccc-----cc-------C---CCCCccEEEecCcCcC-CCCc--ceEEEE-
Q 017640 225 LP---IEEIVHWSHDVGAKVLVDACQSVPHMV-----VD-------V---QGLDADFLVASSHKMC-GPTG--IGFLFG- 282 (368)
Q Consensus 225 ~~---l~~i~~l~~~~g~~li~D~a~~~~~~~-----~~-------~---~~~~~d~~~~s~~K~~-g~~G--~G~l~~- 282 (368)
++ +++|+++|++||+++|+|++|+..... .+ + ......+++.|+||.| |++| +||+++
T Consensus 254 ~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~ 333 (500)
T 3tcm_A 254 LAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEIT 333 (500)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEe
Confidence 99 667777799999999999999853221 11 1 1111246778999987 8777 899998
Q ss_pred --cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHHhCHHHHHHHH
Q 017640 283 --KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID-----------YLSTIGMQKIHAYE 349 (368)
Q Consensus 283 --~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~-----------~~~~~g~~~i~~~~ 349 (368)
++++++.+..... ...+++..+.+++..+++ +... .+.++++.
T Consensus 334 ~~~~~~~~~l~~~~~----------------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~l 389 (500)
T 3tcm_A 334 GFSAPVREQIYKIAS----------------------VNLCSNITGQILASLVMNPPKASDESYASYKAE--KDGILASL 389 (500)
T ss_dssp SCCTTHHHHHHHHHH----------------------TTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHH--HHHHHHHH
T ss_pred CCCHHHHHHHHHHHh----------------------cccCCCHHHHHHHHHHhcCccccchhHHHHHHH--HHHHHHHH
Confidence 7888776653321 112677777777777774 2233 57788889
Q ss_pred HHHHHHHHHHHHhhcCCC
Q 017640 350 VKWIICSIIVIQERHNTT 367 (368)
Q Consensus 350 ~~l~~~l~~~l~~~~g~t 367 (368)
+++++++.+.|.+++|++
T Consensus 390 ~~~~~~l~~~L~~~~g~~ 407 (500)
T 3tcm_A 390 ARRAKALEHAFNKLEGIT 407 (500)
T ss_dssp HHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHhcCCCcE
Confidence 999999999999877754
No 125
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=4.5e-25 Score=210.14 Aligned_cols=266 Identities=12% Similarity=0.098 Sum_probs=185.1
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhh-HHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLS-AKATDEYELARKKVAAFINASDSGEIVFTKNATEAINL 144 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~ 144 (368)
.+.|..+. .+.++.+.+++.+.+...+ .++.. .+..+ ....+..+.+++.+++++|.++. +|++++| ++|+..
T Consensus 27 ~i~l~~~~-~~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~g~~~~-~i~~~sG-t~a~~~ 102 (417)
T 3n0l_A 27 GLEMIASE-NFTLPEVMEVMGSILTNKYAEGYPGK-RYYGGCEFVDEIETLAIERCKKLFNCKFA-NVQPNSG-SQANQG 102 (417)
T ss_dssp SEECCTTC-CCCCHHHHHHHTBGGGGCCCCEETTE-ESSSCCHHHHHHHHHHHHHHHHHHTCSEE-ECCCSSH-HHHHHH
T ss_pred Ceeeeccc-CCCCHHHHHHHhhhhhccccccCCCc-cccccchHHHHHHHHHHHHHHHHhCCCCc-ceEeccH-HHHHHH
Confidence 45665443 4568999999988774322 22221 11122 22345555688899999999753 5777666 899999
Q ss_pred HHHHccCCCCCCCCEEEEcCCCCcccHHHHHHH-HHHcCCEEEEEeCCCCCCCCHHHHHHhcc-cCceEEEEcccccccc
Q 017640 145 VAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKTGANLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLA 222 (368)
Q Consensus 145 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~-~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG 222 (368)
++.++ +++||+|++.+++|++........ ....+..++.++.+.++.+|+++|+++++ .++++|++++++| |
T Consensus 103 ~~~~~----~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--G 176 (417)
T 3n0l_A 103 VYAAL----INPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY--A 176 (417)
T ss_dssp HHHHH----SCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC--C
T ss_pred HHHHh----cCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc--C
Confidence 99998 899999999999998765422221 11234567777777778899999999998 5899999888775 8
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcCCCCcceEEEEc-ccccccCCCcccC
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMCGPTGIGFLFGK-SDLLSAMPPFLGG 296 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~-~~li~~l~~~~~g 296 (368)
.+.|+++|.++|++||+++|+|++|+.+.. +..+. ..|++++|+||.++.+.+|+++++ +++++.+.+....
T Consensus 177 ~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~--~~di~~~s~sK~l~g~~~G~~~~~~~~~~~~~~~~~~~ 254 (417)
T 3n0l_A 177 RVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP--YAHVVSSTTHKTLRGPRGGIIMTNDEELAKKINSAIFP 254 (417)
T ss_dssp SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT--TCSEEEEESSTTTCSCSCEEEEESCHHHHHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc--cceEEEeeCccccCCCCeeEEEECCHHHHHHHhhhhCC
Confidence 999999999999999999999999875543 22222 479999999997643335999998 5777666543321
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+ ..++++...++++..++......+++.+.++..++++++.+.|.+ .|+
T Consensus 255 ~--------------------~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~ 303 (417)
T 3n0l_A 255 G--------------------IQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKF 303 (417)
T ss_dssp T--------------------TCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTC
T ss_pred c--------------------ccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCc
Confidence 1 134678888888888877654445678888999999999999987 343
No 126
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.93 E-value=5.5e-25 Score=209.46 Aligned_cols=167 Identities=21% Similarity=0.268 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 109 ATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 109 ~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
..+..+++++++++++|.+ ++++++|+++|+..++.++ +++||+|++.++.|++....+...++..|++++++
T Consensus 79 ~~p~~~~l~~~la~~~g~~---~~~~~~sG~~Ai~~al~~l----~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 151 (414)
T 3ndn_A 79 GNPTVSVFEERLRLIEGAP---AAFATASGMAAVFTSLGAL----LGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFV 151 (414)
T ss_dssp CCHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTT----CCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred CChHHHHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEe
Confidence 3566778999999999974 7789999999999999987 89999999999999998877777677789999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.+ |+++|++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.... ....+.|+++.|+
T Consensus 152 ~~~-----d~~~l~~ai~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~-~~~~g~div~~S~ 225 (414)
T 3ndn_A 152 DGD-----DLSQWERALSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQ-GFPLGVDVVVYSG 225 (414)
T ss_dssp CTT-----CHHHHHHHTSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCC-CGGGTCSEEEEET
T ss_pred CCC-----CHHHHHHhcCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCC-chhcCCCeEeccC
Confidence 986 8999999999999999999999999999999999999999999999999998654322 2245789999999
Q ss_pred cCcCCCCc---ceEEEEcccccc
Q 017640 269 HKMCGPTG---IGFLFGKSDLLS 288 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~~~~li~ 288 (368)
+|++|++| +|+++++++.+.
T Consensus 226 sK~l~~~G~~~~G~vv~~~~~~~ 248 (414)
T 3ndn_A 226 TKHIDGQGRVLGGAILGDREYID 248 (414)
T ss_dssp TTTTTCSSCCCCEEEEECHHHHT
T ss_pred CccccCCCCceEEEEEECHHHHH
Confidence 99999877 799999887665
No 127
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.93 E-value=1.2e-24 Score=207.17 Aligned_cols=266 Identities=16% Similarity=0.120 Sum_probs=182.9
Q ss_pred CCeEEeccCCC-----C-CCcHHHHHHHHHHHHH-hhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCCCCCcEEE
Q 017640 66 KKLVYLDNAAT-----S-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFI----NASDSGEIVF 134 (368)
Q Consensus 66 ~~~i~l~~~~~-----~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~ 134 (368)
++++.|..+.+ . ++++.+.+++.+.... ...++. .....++|+.+++++ +....++|++
T Consensus 37 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~----------~~g~~~lr~~la~~~~~~~~~~~~~~i~~ 106 (413)
T 3t18_A 37 EAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAP----------IEGEKDYRKIVIDTLFGPYKPEGYISAIA 106 (413)
T ss_dssp GGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCC----------TTCCHHHHHHHHHHHHGGGCCSSEEEEEE
T ss_pred cceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCC----------CCCCHHHHHHHHHHHhcccCccccCcEEE
Confidence 46788888764 3 6788888887664321 111111 111225666666654 3222238999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CCCCCCCHHHHHHhccc----Cc
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-NDDESPDLDKLKEMLSR----KT 209 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~~~~d~~~l~~~l~~----~~ 209 (368)
|+|+++|+..++.++ +++||+|++.+|.|++.. ..++..|++++.+++ ++++.+|+++|++++++ ++
T Consensus 107 t~g~~~al~~~~~~~----~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 178 (413)
T 3t18_A 107 TPGGTGAIRSAIFSY----LDEGDPLICHDYYWAPYR----KICEEFGRNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSD 178 (413)
T ss_dssp ESHHHHHHHHHHHHH----CCSSCEEEEESSCCTHHH----HHHHHHTCEEEEECCBCTTSSBCHHHHHHHHHHHHHHCS
T ss_pred cCccHHHHHHHHHHh----cCCCCEEEECCCCcccHH----HHHHHhCCeEEEeeccCCCCCcCHHHHHHHHHHHhhcCC
Confidence 999999999999998 899999999999888754 445566999999998 45578999999999975 67
Q ss_pred e-EEEEccc-ccccccccCHH---HHHHHHH------hcCCEEEEecCCcCCc------ccc--cCCCCCcc---EEEec
Q 017640 210 K-LVVIHHI-SNMLASILPIE---EIVHWSH------DVGAKVLVDACQSVPH------MVV--DVQGLDAD---FLVAS 267 (368)
Q Consensus 210 ~-~v~~~~~-~n~tG~~~~l~---~i~~l~~------~~g~~li~D~a~~~~~------~~~--~~~~~~~d---~~~~s 267 (368)
+ ++++++| +||||.++|.+ +|+++|+ +||+++|+|++|.... .++ .....+.+ ++++|
T Consensus 179 ~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 258 (413)
T 3t18_A 179 RIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFS 258 (413)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEEEe
Confidence 6 7889998 99999999955 5556666 8999999999986211 011 11122223 78889
Q ss_pred CcCcCCCCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----
Q 017640 268 SHKMCGPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS---- 338 (368)
Q Consensus 268 ~~K~~g~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~---- 338 (368)
+||.+|++| +|++++ ++++++.+........ +....+++.....++..+++...
T Consensus 259 ~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 321 (413)
T 3t18_A 259 MSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSA-----------------RCNWSNGTHAAQNILIELERAENKKIY 321 (413)
T ss_dssp HHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHH-----------------HHHTSSCCHHHHHHHHHTTSHHHHHHH
T ss_pred cCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhh-----------------hccccCCChHHHHHHHHHhcChHHHHH
Confidence 999999888 899998 8888877654321000 00012466676776666665321
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
....+.++++..+..+++.+.|.++ |++
T Consensus 322 ~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 349 (413)
T 3t18_A 322 EQELVDLRNMLKSRADVFVTAAKEN-KLT 349 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 1125567788888888888888876 543
No 128
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.93 E-value=1.4e-25 Score=208.97 Aligned_cols=260 Identities=13% Similarity=0.018 Sum_probs=186.0
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
+++++|+.+..+++++.+.+++.+.... +. ..+...+..+++++++++++| . +.+|++|+|+++++..+
T Consensus 7 ~~~id~~~~~~~~~~~~v~~a~~~~~~~-----~~----~~~~~~~~~~~l~~~la~~~g-~-~~~v~~~~~gt~a~~~a 75 (356)
T 1v72_A 7 PPALGFSSDNIAGASPEVAQALVKHSSG-----QA----GPYGTDELTAQVKRKFCEIFE-R-DVEVFLVPTGTAANALC 75 (356)
T ss_dssp CCCCBCSCGGGCCCCHHHHHHHHHTTSS-----CC----CSTTCSHHHHHHHHHHHHHHT-S-CCEEEEESCHHHHHHHH
T ss_pred CceEeeccCCccCCCHHHHHHHHhhccC-----cc----cccccchHHHHHHHHHHHHhC-C-CCcEEEeCCccHHHHHH
Confidence 5678999887778899999998876421 11 111224566789999999999 4 33699999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHc--CCEEEEEeCCCCCCCCHHHHHH-hccc-------CceEEEEc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKT--GANLKFLNLNDDESPDLDKLKE-MLSR-------KTKLVVIH 215 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~--g~~v~~v~~~~~~~~d~~~l~~-~l~~-------~~~~v~~~ 215 (368)
+.++ .++||+|++.++.|++.+.. ..+... |++++.++.+ ++.+|+++|++ ++++ ++++|+++
T Consensus 76 l~~~----~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~-~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~ 148 (356)
T 1v72_A 76 LSAM----TPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGP-AAKLDIVRLRERTREKVGDVHTTQPACVSIT 148 (356)
T ss_dssp HHTS----CCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCG-GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEE
T ss_pred HHHh----cCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCC-CCeEcHHHHHHHhhhcchhhccCCceEEEEE
Confidence 9987 78999999999988775432 013444 8899999875 57889999999 8875 68999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc-----cccc-CC-CCCccEEEecCcCcCCCCcceEEEEccc
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH-----MVVD-VQ-GLDADFLVASSHKMCGPTGIGFLFGKSD 285 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~-----~~~~-~~-~~~~d~~~~s~~K~~g~~G~G~l~~~~~ 285 (368)
+++| ||.++| +++|.++|++||+++|+|++|+.+. .+.. .. ..+.|+++.|+||+.++.|+|+++++++
T Consensus 149 ~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~g~~~~~~~ 227 (356)
T 1v72_A 149 QATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAEAIVLFNTS 227 (356)
T ss_dssp SSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCEEEEESSGG
T ss_pred cCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCccEEEEECHH
Confidence 9876 999776 7899999999999999999987321 1111 11 1367899999999845666779998988
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
+++.+...... .|+.......++..+++.+.+.....+.++..++.+++.+.|.+++|
T Consensus 228 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g 285 (356)
T 1v72_A 228 LATEMSYRRKR----------------------AGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGG 285 (356)
T ss_dssp GHHHHHHHHHH----------------------TTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHhhHHHHhhc----------------------cCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 87765432110 00111111233333455544422445677888899999999987655
Q ss_pred C
Q 017640 366 T 366 (368)
Q Consensus 366 ~ 366 (368)
+
T Consensus 286 ~ 286 (356)
T 1v72_A 286 V 286 (356)
T ss_dssp E
T ss_pred c
Confidence 4
No 129
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.93 E-value=1.5e-24 Score=203.72 Aligned_cols=246 Identities=17% Similarity=0.168 Sum_probs=180.9
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
.++.+.+++.+.+.... +. ..+...++|+.+++++|.+ ++++++|+|+|+..++.++ .+++||
T Consensus 15 ~~~~~~~a~~~~~~~~~-------~~----~~~~~~~l~~~la~~~~~~---~~i~~~sgt~al~~~l~~l---~~~~gd 77 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRNW-------FI----LGDEDKKFEQEFADYCNVN---YCIGCGNGLDALHLILKGY---DIGFGD 77 (373)
T ss_dssp HHHHHHHHHHHHHHHTC-------CS----SSHHHHHHHHHHHHHHTSS---EEEEESCHHHHHHHHHHHT---TCCTTC
T ss_pred CCHHHHHHHHHHHHCCC-------cc----CCchHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHc---CCCCcC
Confidence 35666777766665421 11 1355678999999999985 7899999999999999987 478999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|+++.++|+++... ++..|++++.++.+ +++.+|+++|++++++++++|+ ++||||...|+++|.++|++|
T Consensus 78 ~Vi~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~ 150 (373)
T 3frk_A 78 EVIVPSNTFIATALA----VSYTGAKPIFVEPDIRTYNIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKY 150 (373)
T ss_dssp EEEEETTSCTHHHHH----HHHHSCEEEEECEETTTTEECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHH----HHHcCCEEEEEeccccccCcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHc
Confidence 999999999996654 34559999999988 5688899999999999998888 667899999999999999999
Q ss_pred CCEEEEecCCcCCcccccCCCCC--ccEEEecCc--CcCCCCc-ceEEEEcc-cccccCCCcccCCcceeecccCCCCCC
Q 017640 238 GAKVLVDACQSVPHMVVDVQGLD--ADFLVASSH--KMCGPTG-IGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFA 311 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~~~~~~~--~d~~~~s~~--K~~g~~G-~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~ 311 (368)
|+++|+|++|+.|.. ++....+ .|++++|++ |.+|+.| +|+++.++ ++++.+++...++.... +.
T Consensus 151 ~~~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~--------~~ 221 (373)
T 3frk_A 151 NLKLIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKK--------YH 221 (373)
T ss_dssp TCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBT--------TB
T ss_pred CCEEEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccC--------Cc
Confidence 999999999998776 4444444 789999966 9888744 78888765 46566655544333210 00
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 312 DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 312 ~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
....|... .+..+.+++......+++.+.++..++.+++.+.|.++
T Consensus 222 ----~~~~g~~~--~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 267 (373)
T 3frk_A 222 ----HIYKGFNS--RLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNP 267 (373)
T ss_dssp ----CCSCCCBC--CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCT
T ss_pred ----cccccccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 01111100 11223333444444467888899999999999988765
No 130
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.92 E-value=1.1e-24 Score=206.06 Aligned_cols=268 Identities=10% Similarity=0.031 Sum_probs=184.2
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHH-HHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCC--c
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQN-YYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSG--E 131 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~--~ 131 (368)
++++.|..+ ...+.++.+.+++.+ .+...... .+.. .....++|+.++++++.. +++ +
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~----~y~~----~~g~~~lr~~la~~~~~~~~~~~~~~~~~ 97 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGAS----LYLP----MEGLNCYRHAIAPLLFGADHPVLKQQRVA 97 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCC----CCCC----TTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccc----cCCC----CCchHHHHHHHHHHHhcCCcccccccceE
Confidence 456677666 333556899999988 76531110 1110 122337888888888542 235 7
Q ss_pred EEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC--CCCCCCCHHHHHHhcc---
Q 017640 132 IVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL--NDDESPDLDKLKEMLS--- 206 (368)
Q Consensus 132 v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~l~--- 206 (368)
|++|+|+++++..+++.+. .+++||+|++.+|+|++. ...++..|++++.++. ++++.+|+++|+++++
T Consensus 98 i~~t~g~~~a~~~~~~~~~--~~~~gd~vl~~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 171 (397)
T 3fsl_A 98 TIQTLGGSGALKVGADFLK--RYFPESGVWVSDPTWENH----VAIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQ 171 (397)
T ss_dssp EEEESHHHHHHHHHHHHHH--HHCTTCCEEEESSCCHHH----HHHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCC
T ss_pred EEEcCCcHHHHHHHHHHHH--hcCCCCeEEEeCCCchhH----HHHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCC
Confidence 8999999999999954321 168999999999988874 4455667999999998 4568889999999998
Q ss_pred cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc-------c-cC-CCCCccEEEecCcCcCCC
Q 017640 207 RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV-------V-DV-QGLDADFLVASSHKMCGP 274 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~-------~-~~-~~~~~d~~~~s~~K~~g~ 274 (368)
++++++++++++||||.+++ +++|.++|++||+++|+|++|+..... + .+ ...+.+++++|+||.+|+
T Consensus 172 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 251 (397)
T 3fsl_A 172 AGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSL 251 (397)
T ss_dssp TTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTC
T ss_pred CCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccC
Confidence 57799999999999999988 558999999999999999999843321 1 11 223567899999999998
Q ss_pred Cc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----HhCHHH
Q 017640 275 TG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-----TIGMQK 344 (368)
Q Consensus 275 ~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-----~~g~~~ 344 (368)
+| +|++++ ++++++.+....... .+....+++.....++..+++... ...++.
T Consensus 252 ~G~riG~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 314 (397)
T 3fsl_A 252 YGERVGGLSVMCEDAEAAGRVLGQLKAT-----------------VRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEE 314 (397)
T ss_dssp GGGCCEEEEEECSSHHHHHHHHHHHHHH-----------------HHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred cCCCeeEEEEecCCHHHHHHHHHHHHHH-----------------HHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 88 899875 234443222111000 001112444445555544444210 223678
Q ss_pred HHHHHHHHHHHHHHHHHhhc
Q 017640 345 IHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~~ 364 (368)
++++..++.+++.+.|.+..
T Consensus 315 ~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 315 MRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 88899999999999998874
No 131
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.92 E-value=6e-24 Score=201.27 Aligned_cols=250 Identities=14% Similarity=0.173 Sum_probs=186.4
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
.++.+.+++.+.+...+..+ . .+...++|+.+++++|.+ ++++++|+++|+..++.++ .+++||
T Consensus 10 ~~~~v~~a~~~~~~~~~~~~------~----g~~~~~l~~~la~~~~~~---~v~~~~ggt~al~~~~~~l---~~~~gd 73 (394)
T 1o69_A 10 MGGNELKYIEEVFKSNYIAP------L----GEFVNRFEQSVKDYSKSE---NALALNSATAALHLALRVA---GVKQDD 73 (394)
T ss_dssp --CCHHHHHHHHHHHTTTSC------T----THHHHHHHHHHHHHHCCS---EEEEESCHHHHHHHHHHHT---TCCTTC
T ss_pred CCHHHHHHHHHHHHcCCccC------C----ChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHc---CCCCCC
Confidence 45677888887776521111 0 134668999999999983 8999999999999999987 378999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccccccccCHHHHHHHHH
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHWSH 235 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l~~ 235 (368)
+|++++++|++....+. ..|++++.++.++++.+|+++|++++++ ++++|++++ |||...++++|.++|+
T Consensus 74 ~Vl~~~~~~~~~~~~~~----~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~ 146 (394)
T 1o69_A 74 IVLASSFTFIASVAPIC----YLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICK 146 (394)
T ss_dssp EEEEESSSCGGGTHHHH----HTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHH
T ss_pred EEEECCCccHHHHHHHH----HcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHH
Confidence 99999999999765543 4699999999987888999999999976 789999886 7999999999999999
Q ss_pred hcCCEEEEecCCcCCcccccC--CC-CCccEEEecCcCcCCCCcceEEEEc-ccccccCCCcccCCcceeecccCCCCCC
Q 017640 236 DVGAKVLVDACQSVPHMVVDV--QG-LDADFLVASSHKMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFA 311 (368)
Q Consensus 236 ~~g~~li~D~a~~~~~~~~~~--~~-~~~d~~~~s~~K~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~ 311 (368)
++|+++|+|++|+.|....+. .. .++|++++|.+|.+++.++|+++++ +++++.+++...++.. ....+.
T Consensus 147 ~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~------~~~~~~ 220 (394)
T 1o69_A 147 ENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARE------NCLHYE 220 (394)
T ss_dssp HTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCC------SSSSCC
T ss_pred HcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccc------cCcccc
Confidence 999999999999976543221 11 2477888888998888789999996 6777766543222211 001122
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 312 DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 312 ~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
....++..+++++...+++.. +++ ++...++.+++.+++.+.|.+.
T Consensus 221 ~~~~g~~~~~~~~~aa~~l~~-l~~-----l~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 221 HLDYGYNYRLSNVLGAIGVAQ-MEV-----LEQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp CSSCCCBCBCCHHHHHHHHHH-HTT-----HHHHHHHHHHHHHHHHHHHTTT
T ss_pred ccccCcccCcCHHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHHHhccc
Confidence 233456666888877776543 443 3446688888888888888764
No 132
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.92 E-value=8.6e-25 Score=206.49 Aligned_cols=215 Identities=20% Similarity=0.266 Sum_probs=166.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+...++++.++++++.+ +.|++++| ++|+..++.++ +++||+|++.+++|++++..+...++..|++++.++
T Consensus 51 ~~~~~~l~~~la~~~~~~--~~i~~~sG-t~a~~~~~~~~----~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGA--GAVLTNTG-MSAIHLVTTVF----LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp CHHHHHHHHHHHHHHTCS--EEEEESSH-HHHHHHHHHHH----CCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred CccHHHHHHHHHHHhCCC--cEEEeCCH-HHHHHHHHHHH----hCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 345668999999999986 36666555 89999999998 789999999999999988777777778899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |+++|++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+...... ..++|+++.|+|
T Consensus 124 ~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~s~s 197 (386)
T 1cs1_A 124 QG-----DEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-ALGADLVLHSCT 197 (386)
T ss_dssp TT-----CHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETT
T ss_pred CC-----CHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-ccCceEEEEcCc
Confidence 75 899999999989999999999999999999999999999999999999999977653323 357999999999
Q ss_pred CcCCCCc--c-eEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 270 KMCGPTG--I-GFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 270 K~~g~~G--~-G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
|++|.+| + |++++++ ++++.+.+...+++ ++.+....+++..+++. +...
T Consensus 198 K~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~---------------------~~~~~~~~~~~~~~l~~-----~~~~ 251 (386)
T 1cs1_A 198 KYLNGHSDVVAGVVIAKDPDVVTELAWWANNIG---------------------VTGGAFDSYLLLRGLRT-----LVPR 251 (386)
T ss_dssp TTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHT---------------------CBCCHHHHHHHHHHHTT-----HHHH
T ss_pred ccccCCCCceeEEEEeCcHHHHHHHHHHHHhcC---------------------CCCCHHHHHHHHhcccH-----HHHH
Confidence 9887554 2 9999987 77777665443211 24455444444444443 2333
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 017640 346 HAYEVKWIICSIIVIQER 363 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~ 363 (368)
.++..+..+.+.+.+.++
T Consensus 252 ~~~~~~~~~~l~~~l~~~ 269 (386)
T 1cs1_A 252 MELAQRNAQAIVKYLQTQ 269 (386)
T ss_dssp HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 445555666666666554
No 133
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.92 E-value=2.2e-24 Score=209.02 Aligned_cols=279 Identities=12% Similarity=0.008 Sum_probs=194.1
Q ss_pred EeccCCCCCCcHHHHH-HHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC--------CcEEEeCCHHH
Q 017640 70 YLDNAATSQKPIAVLK-ALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS--------GEIVFTKNATE 140 (368)
Q Consensus 70 ~l~~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~--------~~v~~t~g~t~ 140 (368)
|+++-..+..++.+.. .+...+ +.+ ...+..++...++.+++.+++++++|.+.. ...+||+|+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~---n~~--~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~ 150 (475)
T 3k40_A 76 FHAYFPTANSYPAIVADMLSGAI---ACI--GFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASE 150 (475)
T ss_dssp BCCSSCCCCCHHHHHHHHHHHHH---CCC--SSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHH
T ss_pred ceeeCCCCCcHHHHHHHHHHHHh---Ccc--ccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHH
Confidence 5666544444444433 333322 222 234455677788888999999999999843 26899999999
Q ss_pred HHHHHHHHccCCC---------------CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 141 AINLVAYSWGLSN---------------LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 141 a~~~~~~~~~~~~---------------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
++..++.+.+... +.++++|+++..+|+++.. .++..|++++.|++++++ +|+++|+++|
T Consensus 151 anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~----~~~~~g~~~~~v~~d~~~-~d~~~L~~~i 225 (475)
T 3k40_A 151 STLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVER----AGLLGGVKLRSVQSENHR-MRGAALEKAI 225 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHH----HHHHHTCEEEEECCBTTB-CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchHHHHH----HHHHcCCceEEEECCCCC-cCHHHHHHHH
Confidence 9998887752110 1135689999999999554 345569999999999889 9999999999
Q ss_pred ccC------ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-C----CC-CCccEEEecCcC-cC
Q 017640 206 SRK------TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-V----QG-LDADFLVASSHK-MC 272 (368)
Q Consensus 206 ~~~------~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~~K-~~ 272 (368)
+++ +.+|++++++|+||.+.|+++|+++|++||+++++|++|+.+....+ . .. ...|++++++|| ++
T Consensus 226 ~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~ 305 (475)
T 3k40_A 226 EQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWML 305 (475)
T ss_dssp HHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSS
T ss_pred HHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccC
Confidence 764 67899999999999999999999999999999999999987644211 1 11 146999999999 55
Q ss_pred CCCcceEEEEcccc-cc-cCC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 017640 273 GPTGIGFLFGKSDL-LS-AMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (368)
Q Consensus 273 g~~G~G~l~~~~~l-i~-~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~ 347 (368)
+|.|+|+++++++. +. .+. +++.+... . ..+......++.+.+ ...+++..+++.+...|++.+.+
T Consensus 306 ~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~--~-----~~~~~~~~~~~~sr~--~~~l~l~~al~~~g~~g~~~~~~ 376 (475)
T 3k40_A 306 VNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQ--G-----SAPDYRHWQIPLGRR--FRALKLWFVLRLYGVENLQAHIR 376 (475)
T ss_dssp CCSSCEEEEESSGGGC----------------------------------CCCGG--GTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEeCHHHHHHHhcCCccccCCCcC--C-----CCCCcccccccCCCc--ccHHHHHHHHHHHhHHHHHHHHH
Confidence 68899999998753 22 111 11111000 0 000001112222222 24567788888888889999999
Q ss_pred HHHHHHHHHHHHHHhhcCCC
Q 017640 348 YEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 348 ~~~~l~~~l~~~l~~~~g~t 367 (368)
+..++++++.+.|++++|++
T Consensus 377 ~~~~~a~~l~~~L~~~~g~~ 396 (475)
T 3k40_A 377 RHCNFAKQFGDLCVADSRFE 396 (475)
T ss_dssp HHHHHHHHHHHHHHHSTTEE
T ss_pred HHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999988764
No 134
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.92 E-value=2.3e-24 Score=205.53 Aligned_cols=265 Identities=10% Similarity=0.009 Sum_probs=183.5
Q ss_pred CCeEEeccCCC-----C-CCcHHHHHHHHHHHHH-hhccCCCCcchhhHHHHHHHHHHHHHHHHHc----CCCCCCcEEE
Q 017640 66 KKLVYLDNAAT-----S-QKPIAVLKALQNYYEA-YNSNVHRGIHFLSAKATDEYELARKKVAAFI----NASDSGEIVF 134 (368)
Q Consensus 66 ~~~i~l~~~~~-----~-~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~~~~~~~v~~ 134 (368)
.+++.|..+.+ . ++++.+.+++.+.... ...++. .....++|+++++++ +.+..++|++
T Consensus 38 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~----------~~g~~~lr~~ia~~~~~~~~~~~~~~i~~ 107 (418)
T 3rq1_A 38 ENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAP----------IAGIPDFLCAAEKECFGNFRPEGHIRSIA 107 (418)
T ss_dssp GGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCC----------TTCCHHHHHHHHHHHHGGGCCSSEEEEEE
T ss_pred CCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCC----------CCChHHHHHHHHHHHhcccCccccccEEE
Confidence 46788888864 3 6788888887664432 111111 111236777777765 3221128999
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhccc----Cc
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DDESPDLDKLKEMLSR----KT 209 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~----~~ 209 (368)
|+|+++|+..++.++ +++||+|++++|.|++. ...++..|++++.++++ +++.+|+++|++++++ ++
T Consensus 108 t~g~~~al~~~~~~l----~~~gd~Vl~~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~ 179 (418)
T 3rq1_A 108 TAGGTGGIHHLIHNY----TEPGDEVLTADWYWGAY----RVICSDTGRTLVTYSLFDEHNNFNHEAFQNRVNELAAKQT 179 (418)
T ss_dssp ESHHHHHHHHHHHHH----SCTTCEEEEESSCCTHH----HHHHHHTTCEEEEECSBCTTSSBCHHHHHHHHHHHHHHCS
T ss_pred CCchHHHHHHHHHHh----cCCCCEEEECCCCchhH----HHHHHHcCCEEEEEeeeCCCCCcCHHHHHHHHHHhhccCC
Confidence 999999999999998 89999999999988874 44556779999999985 5578999999999975 66
Q ss_pred e-EEEEccc-ccccccccCH---HHHHHHHH------hcCCEEEEecCCcCCcc------cc--cCCCCCcc---EEEec
Q 017640 210 K-LVVIHHI-SNMLASILPI---EEIVHWSH------DVGAKVLVDACQSVPHM------VV--DVQGLDAD---FLVAS 267 (368)
Q Consensus 210 ~-~v~~~~~-~n~tG~~~~l---~~i~~l~~------~~g~~li~D~a~~~~~~------~~--~~~~~~~d---~~~~s 267 (368)
+ +++++++ +||||.++|. ++|+++|+ +||+++|+|++|..... ++ .......+ +++.|
T Consensus 180 ~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 259 (418)
T 3rq1_A 180 NVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVCYS 259 (418)
T ss_dssp EEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEEEe
Confidence 5 8889999 9999999995 45556666 89999999999862111 11 11222233 78889
Q ss_pred CcCcCCCCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----
Q 017640 268 SHKMCGPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL----- 337 (368)
Q Consensus 268 ~~K~~g~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~----- 337 (368)
+||.+|.+| +|++++ ++++++.+........ +....+++..+..++..+++..
T Consensus 260 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 322 (418)
T 3rq1_A 260 LSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTS-----------------RATWSNICRPAMRTMANIVADPAKFKE 322 (418)
T ss_dssp STTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHH-----------------HHHTSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred CCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHH-----------------hhccCCCchHHHHHHHHHhCCHHHHHH
Confidence 999999777 899998 8888877654321000 0001246666666666666432
Q ss_pred -HHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 338 -STIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 338 -~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.+ ..+.++++.++..+++.+.|.++ |++
T Consensus 323 ~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 351 (418)
T 3rq1_A 323 YEA-ERNCYYQLIRDRADIFKQEAAQV-GLP 351 (418)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhc-CCC
Confidence 11 24567778888888888888876 543
No 135
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.92 E-value=3.5e-24 Score=204.10 Aligned_cols=162 Identities=18% Similarity=0.227 Sum_probs=139.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++.+++++|.+ ++++++|+++|+..++.++ +++||+|++++++|++++..+...++..|++++.++
T Consensus 55 ~~~~~~l~~~la~~~g~~---~~~~~~~gt~a~~~al~~l----~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 127 (412)
T 2cb1_A 55 DPTAKALEERLKALEGAL---EAVVLASGQAATFAALLAL----LRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVD 127 (412)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHTT----CCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEEC
T ss_pred ChHHHHHHHHHHHHhCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEEC
Confidence 456778999999999975 7899999999999999987 789999999999999988777665677899999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
. |+++|++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.........+.|++++|+|
T Consensus 128 ~------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~ 201 (412)
T 2cb1_A 128 P------EPEAVREALSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLT 201 (412)
T ss_dssp S------SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETT
T ss_pred C------CHHHHHHHhccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCc
Confidence 6 4899999999999999999999999999999999999999999999999999773222222457999999999
Q ss_pred CcCCC-Cc-ceEEEEcc
Q 017640 270 KMCGP-TG-IGFLFGKS 284 (368)
Q Consensus 270 K~~g~-~G-~G~l~~~~ 284 (368)
|+++. .+ +|++++.+
T Consensus 202 K~~~~~~~~~G~~~~~~ 218 (412)
T 2cb1_A 202 KWASGHGSVLGGAVLSR 218 (412)
T ss_dssp TTTTCSSCCCCEEEEEC
T ss_pred ccccCCCCcEEEEEEec
Confidence 98864 44 67777665
No 136
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.92 E-value=1.4e-24 Score=205.65 Aligned_cols=174 Identities=18% Similarity=0.188 Sum_probs=147.9
Q ss_pred HHHHHHHHHHHcCCCCCCcEEE--eCCHHHHHHHHHHHccCCCCCCCCEEEEcC-CCCcccHHHHH------HHHHHcCC
Q 017640 113 YELARKKVAAFINASDSGEIVF--TKNATEAINLVAYSWGLSNLKSGDEVILTV-AEHHSAIVPWQ------LVAQKTGA 183 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~--t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~~------~~~~~~g~ 183 (368)
.+++++.+|+++|.+. .+++ ++|+++|+..++.++ +++||+|++.+ +.|.+....+. ..++..|+
T Consensus 61 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~al----l~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~ 134 (409)
T 3jzl_A 61 RDTLERVYATVFKTEA--ALVRPQIISGTHAISTVLFGI----LRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI 134 (409)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTSCSHHHHHHHHHHHH----CCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC
T ss_pred HHHHHHHHHHHhCCCc--EEEECCCccHHHHHHHHHHHh----cCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC
Confidence 6679999999999863 4444 889999999999998 89999999998 88887543221 23456799
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc----cccccccccCHHHHHHHHHh--cCCEEEEecCCcCCcccccCC
Q 017640 184 NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH----ISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHMVVDVQ 257 (368)
Q Consensus 184 ~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~----~~n~tG~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~~~~~~ 257 (368)
+++.++.++++.+|++++++++++++++|++++ ++||||.+.|+++|.++|++ ||+++++|++|+.+....+..
T Consensus 135 ~~~~v~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~ 214 (409)
T 3jzl_A 135 GYSSVPLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPP 214 (409)
T ss_dssp EEEECCCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSG
T ss_pred EEEEeCCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCcc
Confidence 999999988899999999999999999999999 99999999999999999999 999999999999776333334
Q ss_pred CCCccEEEecCcCcCCCCc---ceEEEEcccccccCCC
Q 017640 258 GLDADFLVASSHKMCGPTG---IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 258 ~~~~d~~~~s~~K~~g~~G---~G~l~~~~~li~~l~~ 292 (368)
..+.|++++|+||.+|+.| .|++++++++++.++.
T Consensus 215 ~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~ 252 (409)
T 3jzl_A 215 EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGY 252 (409)
T ss_dssp GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHH
T ss_pred ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHH
Confidence 4679999999999887654 5999999999887764
No 137
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.92 E-value=4e-25 Score=212.63 Aligned_cols=215 Identities=19% Similarity=0.220 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
...+++++.+++ +|.+ +++++|+|+|+++..++.++ +++||+|+++.++|++....+.. .|+++++++.
T Consensus 57 ~~~~~~~~~la~-~g~~--~~v~~~~G~t~a~~~~~~a~----~~~gd~Vlv~~~~h~s~~~~~~~----~G~~~~~v~~ 125 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY--DGYFLVNGTTSGILSVIQSF----SQKKGDILMARNVHKSVLHALDI----SQQEGHFIET 125 (446)
T ss_dssp SHHHHHHHHHCS-CTTE--EEEEESSHHHHHHHHHHHTT----TTSSSCEEECTTCCHHHHHHHHH----HTCCEEECEE
T ss_pred hHHHHHHHHHHh-cCCC--ceEEEeCCHHHHHHHHHHHh----cCCCCEEEEecCccHHHHHHHHH----cCCeEEEEeC
Confidence 456789999999 9987 48999999999999999988 88999999999999997765443 5999999988
Q ss_pred --CCC----CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCC
Q 017640 191 --NDD----ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGL 259 (368)
Q Consensus 191 --~~~----~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~ 259 (368)
+++ +.+|+++| +.+++++|++++ .|++|.+.|+++|.++|++||+++|+|++|+. .. +.+....
T Consensus 126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~ 200 (446)
T 2x3l_A 126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNY 200 (446)
T ss_dssp EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGG
T ss_pred eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHc
Confidence 554 56788877 556789999999 67799999999999999999999999999986 22 3344445
Q ss_pred CccEEEecCcC-cCCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 260 DADFLVASSHK-MCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 260 ~~d~~~~s~~K-~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
++|+++.|+|| ++|+.|+|++++++++++ +.+...++ ..+..+++++..++++..+++++.
T Consensus 201 g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~-~~~~~~~~-----------------~~~~~~s~~~~~~aal~~a~~~l~ 262 (446)
T 2x3l_A 201 QADYVVQSFHKTLPALTMGSVLYIHKNAPY-RENIIEYL-----------------SYFQTSSPSYLIMASLESAAQFYK 262 (446)
T ss_dssp TCSEEEECHHHHSSSCTTCEEEEEETTCTT-HHHHHHHH-----------------HHHSCSSCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEECCccccccccccEEEEEcCCcCC-HHHHHHHH-----------------HHHcCCCchHHHHHHHHHHHHHHH
Confidence 78999999999 677888999999998765 22221110 234567899999999999999999
Q ss_pred HhCHHHHHHHHHHHHHHHHHH
Q 017640 339 TIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~ 359 (368)
..|.+.+.++..++++++.+.
T Consensus 263 ~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 263 TYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp HCCCHHHHHHHHHHHHHHHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHc
Confidence 888777888999988888776
No 138
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.92 E-value=3.5e-24 Score=204.57 Aligned_cols=265 Identities=14% Similarity=0.009 Sum_probs=183.0
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCC--cE
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSG--EI 132 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~--~v 132 (368)
++++.|..+ ...++++.+.+++.+.+...... .+.. .....++|+.++++++.. +++ +|
T Consensus 49 ~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i 120 (420)
T 4f4e_A 49 PTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPR----GYLP----IDGIAAYDASVQKLLLGDDSPLIAAGRVVT 120 (420)
T ss_dssp SSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCC----CCCC----TTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred CCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCC----CCCC----CCCcHHHHHHHHHHhcCCCccccccCceEE
Confidence 455677666 33355689999999888751111 1110 122336888888887542 234 79
Q ss_pred EEeCCHHHHHHHHHH--HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC--CCCCCCCHHHHHHhcc--
Q 017640 133 VFTKNATEAINLVAY--SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL--NDDESPDLDKLKEMLS-- 206 (368)
Q Consensus 133 ~~t~g~t~a~~~~~~--~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~--~~~~~~d~~~l~~~l~-- 206 (368)
++|+|+++|+..+++ ++ +++||+|++++|+|++. ...++..|++++.++. ++++.+|++.|++.++
T Consensus 121 ~~t~G~t~al~~~~~~~~~----~~~gd~Vlv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 192 (420)
T 4f4e_A 121 AQALGGTGALKIGADFLRT----LNPKAKVAISDPSWENH----RALFDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGY 192 (420)
T ss_dssp EEEEHHHHHHHHHHHHHHH----HCTTCCEEEEESCCHHH----HHHHHHTTCCEEEEECEETTTTEECHHHHHHHHTTC
T ss_pred EECCccHHHHHHHHHHHHH----hCCCCEEEEeCCCcHhH----HHHHHHcCCeEEEeeeeccccCccCHHHHHHHHHhC
Confidence 999999999999954 44 68999999999988874 4445667999999998 3568889999999997
Q ss_pred -cCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc-------c-cC-CCCCccEEEecCcCcCC
Q 017640 207 -RKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV-------V-DV-QGLDADFLVASSHKMCG 273 (368)
Q Consensus 207 -~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~-------~-~~-~~~~~d~~~~s~~K~~g 273 (368)
++++++++++++||||.+++ +++|+++|++||+++|+|++|+..... + .+ ...+.++++.|+||.||
T Consensus 193 ~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 272 (420)
T 4f4e_A 193 EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFS 272 (420)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTT
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCc
Confidence 67899999999999999998 668889999999999999998743221 1 11 12457799999999999
Q ss_pred CCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----HhCHH
Q 017640 274 PTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-----TIGMQ 343 (368)
Q Consensus 274 ~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-----~~g~~ 343 (368)
++| +|++++ ++++++.+....... .+....+++.....++..+++... ...++
T Consensus 273 ~~G~RiG~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 335 (420)
T 4f4e_A 273 LYGERVGALSIITDSKDEAARVLSQLKRV-----------------IRTNYSNPPTHGGAIVAAVLASPELRASWVQELG 335 (420)
T ss_dssp CGGGCEEEEEEECSSHHHHHHHHHHHHHH-----------------HHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CcCCCcEEEEEEcCCHHHHHHHHHHHHHH-----------------HhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 888 899864 334433221110000 001111344444444444444211 12367
Q ss_pred HHHHHHHHHHHHHHHHHHhh
Q 017640 344 KIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~ 363 (368)
.++++.+++.+++.+.|+++
T Consensus 336 ~~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 336 EMRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 88889999999999999876
No 139
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=2.2e-25 Score=214.23 Aligned_cols=221 Identities=12% Similarity=0.153 Sum_probs=160.8
Q ss_pred CCeE-EeccCCCCCCcHHHHHHHHHHHHHhhcc-------CCCCcchhhHHHHHHHHHHHHHHHHHc------CCCCCCc
Q 017640 66 KKLV-YLDNAATSQKPIAVLKALQNYYEAYNSN-------VHRGIHFLSAKATDEYELARKKVAAFI------NASDSGE 131 (368)
Q Consensus 66 ~~~i-~l~~~~~~~~~~~v~~a~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~ 131 (368)
++++ +|+++.+.. ++.+.+++.+++.....+ +....+..++.......++|+.+++++ ++++ ++
T Consensus 31 ~~~i~~l~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-~~ 108 (444)
T 3if2_A 31 DQPVNMLGGGNPAK-IDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFIDALVGFFNRHYDWNLTS-EN 108 (444)
T ss_dssp SSCCEECSCCCCCC-CHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-GG
T ss_pred chhhhccCCCCCCc-ccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHHHHHHHHHhhcCCCCCH-HH
Confidence 5678 999987665 566777777777665444 320111222222333457888888877 4444 49
Q ss_pred EEEeCCHHHHHHHHHHHccCCCCCCCC--------------EEEEc-CCCCcccHHHHH--HHHHHcCCEEEEEeCCC-C
Q 017640 132 IVFTKNATEAINLVAYSWGLSNLKSGD--------------EVILT-VAEHHSAIVPWQ--LVAQKTGANLKFLNLND-D 193 (368)
Q Consensus 132 v~~t~g~t~a~~~~~~~~~~~~~~~gd--------------~vl~~-~~~~~s~~~~~~--~~~~~~g~~v~~v~~~~-~ 193 (368)
|++|+|+++|+.+++.++ +++|| +|++. +|+|++...... ......|.+++.++.++ +
T Consensus 109 i~~t~G~t~al~~~~~~l----~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (444)
T 3if2_A 109 IALTNGSQNAFFYLFNLF----GGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEE 184 (444)
T ss_dssp EEEESSHHHHHHHHHHHS----SEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCCEEEEEEETTEE
T ss_pred EEEecCcHHHHHHHHHHH----hCCCccccccccccccccceEEEeCCCCccchhhcccccchhhccCceEEeccccccc
Confidence 999999999999999998 77887 78776 888887543110 01233477888888775 2
Q ss_pred ----CCCCHHHHHHh---cccCceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcccc-----cCCC
Q 017640 194 ----ESPDLDKLKEM---LSRKTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMVV-----DVQG 258 (368)
Q Consensus 194 ----~~~d~~~l~~~---l~~~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~~-----~~~~ 258 (368)
+.+|+++|+++ +.+++++|++++++||||.++| +++|.++|++||+++|+|++|+.+...+ ....
T Consensus 185 g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~ 264 (444)
T 3if2_A 185 GFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNW 264 (444)
T ss_dssp EEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCC
T ss_pred CccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccC
Confidence 36899999998 6778999999999999999999 8899999999999999999998432211 1122
Q ss_pred CCccEEEecCcCcCCCCc--ceEEEEcccccccCCCc
Q 017640 259 LDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 259 ~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~ 293 (368)
.+.+++++|+||. +++| +|++++++++++.+...
T Consensus 265 ~~~~i~~~S~sK~-~~~G~r~G~~~~~~~l~~~~~~~ 300 (444)
T 3if2_A 265 DNNTILCFSLSKI-GLPGMRTGIIVADAKVIEAVSAM 300 (444)
T ss_dssp CTTEEEEEESTTT-TCGGGCCEEEECCHHHHHHHHHH
T ss_pred CCCEEEEechhhc-cCCCCceEEEEECHHHHHHHHHH
Confidence 4678999999996 6555 89999999888776543
No 140
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.92 E-value=1.6e-23 Score=198.63 Aligned_cols=250 Identities=13% Similarity=0.093 Sum_probs=183.1
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
.++.+.+++.+.+... .+.. .+...++++.+++++|.+ ++++++|+++|+..++.++ .+++||
T Consensus 42 ~~~~v~~a~~~~~~~~-------~y~~----~~~~~~l~~~la~~~~~~---~~v~~~~Gt~a~~~~l~~~---~~~~gd 104 (399)
T 2oga_A 42 LRAETDAAIARVLDSG-------RYLL----GPELEGFEAEFAAYCETD---HAVGVNSGMDALQLALRGL---GIGPGD 104 (399)
T ss_dssp THHHHHHHHHHHHHHT-------CCSS----SHHHHHHHHHHHHHTTSS---EEEEESCHHHHHHHHHHHT---TCCTTC
T ss_pred CCHHHHHHHHHHHhcC-------CCCC----chhHHHHHHHHHHHHCCC---eEEEecCHHHHHHHHHHHh---CCCCcC
Confidence 3488888888877641 1111 245568999999999986 6788888899999999987 368999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|++++++|++... .++..|++++.++.++ ++.+|+++|++++++++++|+ ++||||.+.|+++|.++|+++
T Consensus 105 ~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~ 177 (399)
T 2oga_A 105 EVIVPSHTYIASWL----AVSATGATPVPVEPHEDHPTLDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRH 177 (399)
T ss_dssp EEEEESSSCTHHHH----HHHHTTCEEEEECBCSSSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHH
T ss_pred EEEECCCccHHHHH----HHHHCCCEEEEEecCCCCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHc
Confidence 99999999998543 4456799999999886 578999999999988888877 457899999999999999999
Q ss_pred CCEEEEecCCcCCcccccCCCCC--ccEEEecC--cCcCCCCc-ceEEEEc-ccccccCCCcccCCcceeecccCCCCCC
Q 017640 238 GAKVLVDACQSVPHMVVDVQGLD--ADFLVASS--HKMCGPTG-IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFA 311 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~~~~~~~--~d~~~~s~--~K~~g~~G-~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~ 311 (368)
|+++|+|++|+.+.. .+....+ .|++++|+ +|++|++| +|+++++ +++++.+++....+... .+.
T Consensus 178 ~~~li~Dea~~~g~~-~~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~--------~~~ 248 (399)
T 2oga_A 178 GLHIVEDAAQAHGAR-YRGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQ--------KYS 248 (399)
T ss_dssp TCEECEECTTCTTCE-ETTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSS--------TTC
T ss_pred CCEEEEECcccccCc-cCCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccc--------ccc
Confidence 999999999997754 2322223 68999999 59999866 7888886 67776665443322210 010
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 312 DPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 312 ~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.....+ ..+.+..+.+++..+++.+ +.+.++..++.+++.+.|.+++|++
T Consensus 249 ~~~~g~-~~~~~~~~~a~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~g~~ 298 (399)
T 2oga_A 249 HETKGT-NSRLDEMQAAVLRIRLAHL-----DSWNGRRSALAAEYLSGLAGLPGIG 298 (399)
T ss_dssp CCSCCC-BCCCCHHHHHHHHHHHHTH-----HHHHHHHHHHHHHHHHHTTTCTTCB
T ss_pred cccccc-CCCcCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHhccCCCcc
Confidence 000011 1244566555555565544 4456777888999999998876643
No 141
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=204.66 Aligned_cols=281 Identities=11% Similarity=0.004 Sum_probs=197.2
Q ss_pred EeccCCCCCCcHH-HHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCC---------CcEEEeCCHH
Q 017640 70 YLDNAATSQKPIA-VLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDS---------GEIVFTKNAT 139 (368)
Q Consensus 70 ~l~~~~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~---------~~v~~t~g~t 139 (368)
|+++-..+..++. +.+.+...+ +.+. ..+..++...++.+++.+++++++|.+.. ...++|+|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~---n~~~--~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt 155 (481)
T 4e1o_A 81 MHAYYPALTSWPSLLGDMLADAI---NCLG--FTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVS 155 (481)
T ss_dssp BCSSSCCCCCHHHHHHHHHHHHH---CCCC--SSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHH
T ss_pred eeEeCCCCCCHHHHHHHHHHHHh---Cccc--CCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchH
Confidence 5555444433333 334444333 2222 34455677788888999999999999743 1679999999
Q ss_pred HHHHHHHHHccCCC---------------CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHh
Q 017640 140 EAINLVAYSWGLSN---------------LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 140 ~a~~~~~~~~~~~~---------------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~ 204 (368)
+++..++.+.+... ..+++.|++++.+|+++... +...|.+++.|++++++.+|+++|+++
T Consensus 156 ~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~----~~~~g~~~~~v~~~~~~~~d~~~Le~~ 231 (481)
T 4e1o_A 156 ESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKA----GLISLVKMKFLPVDDNFSLRGEALQKA 231 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHH----HHhCCCceEEEEcCCCCcCCHHHHHHH
Confidence 99999988752110 12577999999999995543 455699999999988999999999999
Q ss_pred cccC------ceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccccc-C----CC-CCccEEEecCcCc-
Q 017640 205 LSRK------TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD-V----QG-LDADFLVASSHKM- 271 (368)
Q Consensus 205 l~~~------~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~-~----~~-~~~d~~~~s~~K~- 271 (368)
|+++ +.+|++++++|+||.+.|+++|+++|++||+++++|++|+.+....+ . .. ...|++++++||+
T Consensus 232 i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l 311 (481)
T 4e1o_A 232 IEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWM 311 (481)
T ss_dssp HHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHS
T ss_pred HHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhc
Confidence 9764 67899999999999999999999999999999999999987643211 1 11 1359999999995
Q ss_pred CCCCcceEEEEcccc-ccc-CC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 272 CGPTGIGFLFGKSDL-LSA-MP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 272 ~g~~G~G~l~~~~~l-i~~-l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
++|.|+|+++++++. +.. +. ++...... ...+.......+.+.+ ...+++..++..+...|++.+.
T Consensus 312 ~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~-------~~~~~~~~~~~~~~r~--~~~l~~~~al~~~g~~g~~~~~ 382 (481)
T 4e1o_A 312 MVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANS-------GVATDFMHWQIPLSRR--FRSVKLWFVIRSFGVKNLQAHV 382 (481)
T ss_dssp SCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTT-------TTSCCGGGGSSSSCCC--CTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCHHHHHHHhcCCchhccCccc-------CCCCCcccccccCCCC--ccHHHHHHHHHHhHHHHHHHHH
Confidence 558889999988753 222 11 11111000 0000000112222222 2345677778888777899999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCC
Q 017640 347 AYEVKWIICSIIVIQERHNTTL 368 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~t~ 368 (368)
++..++++++.+.|.+++|+++
T Consensus 383 ~~~~~~a~~l~~~L~~~~g~~~ 404 (481)
T 4e1o_A 383 RHGTEMAKYFESLVRNDPSFEI 404 (481)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEC
T ss_pred HHHHHHHHHHHHHHhcCCCeEE
Confidence 9999999999999999888653
No 142
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.92 E-value=4e-24 Score=202.13 Aligned_cols=170 Identities=20% Similarity=0.264 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+...++++.+++++|.+ ++++++|+++|+..++.++ +++||+|+++++.|+++...+...++..|++++.++
T Consensus 58 ~~~~~~l~~~la~~~g~~---~~i~~~sG~~ai~~~~~~~----~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEGAA---GSAAFGSGMGAISSSTLAF----LQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHTTT----CCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred ChHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHH----hCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 456778999999999986 5566777889999999887 789999999999999988877777788899999999
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc--cccCCCCCccEEEec
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM--VVDVQGLDADFLVAS 267 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~--~~~~~~~~~d~~~~s 267 (368)
.. |++++++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.. +++ .++|+++.|
T Consensus 131 ~~-----d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~---~~~di~~~S 202 (389)
T 3acz_A 131 TS-----DVEKVKAAWKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLE---LGADIALHS 202 (389)
T ss_dssp TT-----CHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGG---TTCSEEEEE
T ss_pred CC-----CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCccc---cCCeEEEEC
Confidence 74 89999999999999999999999999999999999999999999999999987653 333 579999999
Q ss_pred CcCcCCCCc---ceEEEEcc-cccccCCCcc
Q 017640 268 SHKMCGPTG---IGFLFGKS-DLLSAMPPFL 294 (368)
Q Consensus 268 ~~K~~g~~G---~G~l~~~~-~li~~l~~~~ 294 (368)
++|++|.+| +|++++++ ++++.+++..
T Consensus 203 ~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~ 233 (389)
T 3acz_A 203 VSKYINGHGDVIGGVSSAKTAEDIATIKFYR 233 (389)
T ss_dssp TTTTTTCSSCCCCEEEEESSHHHHHHHHHHH
T ss_pred ChhhccCCCCceeEEEEECcHHHHHHHHHHH
Confidence 999776554 49999999 8887766443
No 143
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.92 E-value=9e-24 Score=198.08 Aligned_cols=247 Identities=16% Similarity=0.131 Sum_probs=177.3
Q ss_pred CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCC
Q 017640 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSG 157 (368)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~g 157 (368)
+.++.+.+++.+.+.... +. ..+...++|+.+++++|.+ ++++++|+|+|+..++.++ .+++|
T Consensus 13 ~~~~~v~~a~~~~~~~~~-------~~----~~~~~~~l~~~la~~~~~~---~~~~~~sGt~al~~al~~~---~~~~g 75 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHGQ-------YI----LGPEVTELEDRLADFVGAK---YCISCANGTDALQIVQMAL---GVGPG 75 (367)
T ss_dssp HHHHHHHHHHHHHHHHCC-------CS----SCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHT---TCCTT
T ss_pred ccCHHHHHHHHHHHhcCC-------cc----CChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHh---CCCCc
Confidence 346677777777665421 11 1244668999999999986 7899999999999999987 47899
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHh
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHD 236 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~ 236 (368)
|+|+++.++|+++... ++..|+++++++++++ +.+|+++|++++++++++|+ ++|+||...|+++|.++|++
T Consensus 76 d~Vi~~~~~~~~~~~~----~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~ 148 (367)
T 3nyt_A 76 DEVITPGFTYVATAET----VALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASK 148 (367)
T ss_dssp CEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHH
T ss_pred CEEEECCCccHHHHHH----HHHcCCEEEEEecCCccCCcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHH
Confidence 9999999999986544 4556999999999866 89999999999998988888 66789999999999999999
Q ss_pred cCCEEEEecCCcCCcccccCCCCCc--cEEEecC--cCcCCCCc-ceEEEEc-ccccccCCCcccCCcceeecccCCCCC
Q 017640 237 VGAKVLVDACQSVPHMVVDVQGLDA--DFLVASS--HKMCGPTG-IGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTF 310 (368)
Q Consensus 237 ~g~~li~D~a~~~~~~~~~~~~~~~--d~~~~s~--~K~~g~~G-~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~ 310 (368)
||+++|+|++|+.|.. .+....+. |++++|+ +|.+|+.| +|+++.+ +++.+.+++....+.... +
T Consensus 149 ~~~~li~D~a~~~g~~-~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~--------~ 219 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGAS-YKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRR--------Y 219 (367)
T ss_dssp TTCCBEEECTTTTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEET--------T
T ss_pred cCCEEEEECccccCCe-ECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcC--------c
Confidence 9999999999998765 22222222 9999996 89998855 7888885 556665554433322200 0
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 311 ADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 311 ~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
......+.. ..+....+.....++ .++.+.++.+++.+++.+.|.++
T Consensus 220 ~~~~~g~~~-~~~~~~aa~~~~~l~-----~~~~~~~~~~~~~~~~~~~L~~~ 266 (367)
T 3nyt_A 220 HHIRVGVNS-RLDTLQAAILLPKLE-----IFEEEIALRQKVAAEYDLSLKQV 266 (367)
T ss_dssp EECSCCCBC-CCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeeccCcCC-CccHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhccC
Confidence 000001111 223322222222222 35667788888899999999876
No 144
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.92 E-value=4.6e-24 Score=202.31 Aligned_cols=263 Identities=13% Similarity=0.024 Sum_probs=175.0
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcEEE-
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVF- 134 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~- 134 (368)
+++.|..+. ..+..+.+.+++.+..... .+.. +.. .....++|++++++++.. ++++|++
T Consensus 29 ~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~-~~~~---Y~~----~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v 100 (401)
T 7aat_A 29 KKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKK-MDKE---YLP----IAGLADFTRASAELALGENSEAFKSGRYVTV 100 (401)
T ss_dssp TCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTT-CCCC---CCC----TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEE
T ss_pred CceeeeeeeEECCCCCEechHHHHHHHHHhcccc-cccC---CCC----CCCCHHHHHHHHHHhcCCCccccccCceEEE
Confidence 345555544 3444567788777665421 1111 111 112347888888888654 1348877
Q ss_pred -eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcc---cC
Q 017640 135 -TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLS---RK 208 (368)
Q Consensus 135 -t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~---~~ 208 (368)
|+|+++++.+++.++.. .+++||+|++++|+|.+.. ..++..|++++.++++ .++.+|++.+++.+. ++
T Consensus 101 ~t~G~~~al~~~~~~l~~-~~~~gd~Vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 175 (401)
T 7aat_A 101 QGISGTGSLRVGANFLQR-FFKFSRDVYLPKPSWGNHT----PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEK 175 (401)
T ss_dssp EEEHHHHHHHHHHHHHHH-HCTTCCEEEEEESCCTTHH----HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTT
T ss_pred ecCcchHHHHHHHHHHHH-hccCCCEEEEcCCCchhHH----HHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCC
Confidence 99999999998876510 1488999999999998854 4455669999999985 368889997776664 57
Q ss_pred ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-c-------cc--CCCCCccEEEecCcCcCCCC
Q 017640 209 TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-V-------VD--VQGLDADFLVASSHKMCGPT 275 (368)
Q Consensus 209 ~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-~-------~~--~~~~~~d~~~~s~~K~~g~~ 275 (368)
++++++++++||||.+++ +++|+++|++||+++|+|++|..... . +. .......+++.|+||.||++
T Consensus 176 ~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~ 255 (401)
T 7aat_A 176 SIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLY 255 (401)
T ss_dssp CEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCG
T ss_pred cEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccc
Confidence 899999999999999998 77889999999999999999873221 1 10 12235778999999999998
Q ss_pred c--ceEEEE---ccc----ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--H-H--HhC
Q 017640 276 G--IGFLFG---KSD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY--L-S--TIG 341 (368)
Q Consensus 276 G--~G~l~~---~~~----li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~--~-~--~~g 341 (368)
| +|++++ +++ +++.++.....+ ...++.....++..+++. + . ...
T Consensus 256 G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (401)
T 7aat_A 256 GERAGAFTVICRDAEEAKRVESQLKILIRPM---------------------YSNPPMNGARIASLILNTPELRKEWLVE 314 (401)
T ss_dssp GGCEEEEEEECSSHHHHHHHHHHHHHHHHHH---------------------HSSCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCceEEEEEEeCCHHHHHHHHHHHHHHHHhc---------------------cCCCChHHHHHHHHHhCCHHHHHHHHHH
Confidence 8 899886 333 222222211100 113333333333333321 0 0 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 017640 342 MQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
++.++++.+++++++.+.|.+.
T Consensus 315 ~~~~~~~~~~~r~~l~~~L~~~ 336 (401)
T 7aat_A 315 VKGMADRIISMRTQLVSNLKKE 336 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 5677888889999999988775
No 145
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.92 E-value=4.4e-25 Score=209.54 Aligned_cols=282 Identities=13% Similarity=0.107 Sum_probs=195.9
Q ss_pred cchhhhhcCCCCcccccccCCCCeEEeccCCCCCCcHHHHHHHHHHHHH--hhccCCCCcchhhHHHHHHH-HHHHHHHH
Q 017640 45 VSLGHITRPDFPILHQEVYGSKKLVYLDNAATSQKPIAVLKALQNYYEA--YNSNVHRGIHFLSAKATDEY-ELARKKVA 121 (368)
Q Consensus 45 ~~~~~~~r~~f~~~~~~~~~~~~~i~l~~~~~~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~r~~la 121 (368)
..++..++++.... .+++.+..+... .++.+.+++.+.+.. ...++.. .+..+....+.. +..|+.++
T Consensus 9 ~~i~~~~~~~~~~~-------~~~i~~~~~~~~-~~~~v~~a~~~~~~~~~~~~y~~~-~~~~g~~~~~~~e~~ar~~la 79 (407)
T 2dkj_A 9 EALFELIALEEKRQ-------REGLELIASENF-VSKQVREAVGSVLTNKYAEGYPGA-RYYGGCEVIDRVESLAIERAK 79 (407)
T ss_dssp HHHHHHHHHHHHHH-------HTSEECCTTCCC-CCHHHHHHHTSGGGGCCCCEETTE-ESSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-------hcceeeccCCCC-CCHHHHHHHHhhhhcCcccCCCcc-cccCCchHHHHHHHHHHHHHH
Confidence 34555555444332 345666555544 499999999888754 2223321 111122222233 34678999
Q ss_pred HHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC--EEEEEeCCC-CCCCCH
Q 017640 122 AFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA--NLKFLNLND-DESPDL 198 (368)
Q Consensus 122 ~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~--~v~~v~~~~-~~~~d~ 198 (368)
+++|.++. +|++++ +++|+..++.++ +++||+|++.+++|++...... .++..|. .++.+++++ ++.+|+
T Consensus 80 ~~~g~~~~-~i~~~s-Gt~a~~~~~~~~----~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (407)
T 2dkj_A 80 ALFGAAWA-NVQPHS-GSQANMAVYMAL----MEPGDTLMGMDLAAGGHLTHGS-RVNFSGKLYKVVSYGVRPDTELIDL 152 (407)
T ss_dssp HHHTCSEE-ECCCSS-HHHHHHHHHHHH----CCTTCEEEEECGGGTCCGGGTC-TTSHHHHHSEEEEECCCTTTSSCCH
T ss_pred HHhCCCcc-eEEecc-hHHHHHHHHHHh----cCCCCEEEEecccccCccchHH-HHHhcCceEEEEecCCCcccCccCH
Confidence 99998742 344455 567999999998 7899999999999988732111 1122244 455555443 678899
Q ss_pred HHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCC---CCccEEEecCcCcC-C
Q 017640 199 DKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQG---LDADFLVASSHKMC-G 273 (368)
Q Consensus 199 ~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~---~~~d~~~~s~~K~~-g 273 (368)
++|++++++ ++++|++++++|| ...|+++|.++|++||+++|+|++|+.|....+... ...|++++|+||.+ |
T Consensus 153 ~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g 230 (407)
T 2dkj_A 153 EEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRG 230 (407)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCC
T ss_pred HHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCC
Confidence 999999985 8899999888886 778999999999999999999999986543222110 13799999999965 4
Q ss_pred CCcceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 274 PTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 274 ~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
+.| |+++++ +++++.+.+.... +..++++...++++..+++.+...+++.+.++..++
T Consensus 231 ~~~-G~~~~~~~~~~~~l~~~~~~--------------------~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~ 289 (407)
T 2dkj_A 231 PRG-GLILSNDPELGKRIDKLIFP--------------------GIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVEN 289 (407)
T ss_dssp CSC-EEEEESCHHHHHHHHHHHTT--------------------TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCc-eEEEECCHHHHHHHHhhhcc--------------------cccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 665 999999 6887766543321 223477787777888888887655688999999999
Q ss_pred HHHHHHHHHhhcCC
Q 017640 353 IICSIIVIQERHNT 366 (368)
Q Consensus 353 ~~~l~~~l~~~~g~ 366 (368)
.+++.+.|.+. |+
T Consensus 290 ~~~l~~~L~~~-g~ 302 (407)
T 2dkj_A 290 AKRLAEELARR-GY 302 (407)
T ss_dssp HHHHHHHHHHT-TC
T ss_pred HHHHHHHHHhC-Cc
Confidence 99999999876 54
No 146
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.92 E-value=6.6e-24 Score=200.81 Aligned_cols=252 Identities=14% Similarity=0.107 Sum_probs=183.3
Q ss_pred eEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
..|+|.+. .++.++.+.+++.+.+...... . ..+ ..+..+++++.++++++.+.+ +|++|+|+++|
T Consensus 45 ~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~-~-~~~-----~~~~~~~l~~~la~~~~~~~~-~v~~~~gg~~a 116 (395)
T 1vef_A 45 NEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAM-P-QTL-----PTPMRGEFYRTLTAILPPELN-RVFPVNSGTEA 116 (395)
T ss_dssp CEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCC-C-TTS-----CCHHHHHHHHHHHHTSCTTEE-EEEEESSHHHH
T ss_pred CEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCC-c-ccc-----CCHHHHHHHHHHHHhcCCCcC-EEEEcCcHHHH
Confidence 34566532 3568999999999988764211 1 111 245667899999999987554 89999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE------------EEEEeCCCCCCCCHHHHHHhcccCc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN------------LKFLNLNDDESPDLDKLKEMLSRKT 209 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~------------v~~v~~~~~~~~d~~~l~~~l~~~~ 209 (368)
+..++.++. .+.+|+.|++.++.|++...... ...|.+ +..++. .|+++|++++++++
T Consensus 117 ~~~al~~~~--~~~~~~~vi~~~~~y~~~~~~~~---~~~g~~~~~~~~~p~~~~~~~~~~-----~d~~~l~~~i~~~~ 186 (395)
T 1vef_A 117 NEAALKFAR--AHTGRKKFVAAMRGFSGRTMGSL---SVTWEPKYREPFLPLVEPVEFIPY-----NDVEALKRAVDEET 186 (395)
T ss_dssp HHHHHHHHH--HHHSCCEEEEETTCCCCSSHHHH---HTCCCHHHHGGGCSCSSCEEEECT-----TCHHHHHHHCCTTE
T ss_pred HHHHHHHHH--HHhCCCeEEEEcCCcCCCchhhh---hhcCCcccccccCCCCCCeeEeCC-----CcHHHHHHHhccCE
Confidence 999998751 02578899999999887543222 223443 344443 38999999999889
Q ss_pred eEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCC-CcceE
Q 017640 210 KLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGIGF 279 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~-~G~G~ 279 (368)
++|++++++||||.+.| +++|.++|++||+++|+|++|+ ++.. +++.....+|++ |+||.+++ .++|+
T Consensus 187 ~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g~~~G~ 264 (395)
T 1vef_A 187 AAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGGVPLGV 264 (395)
T ss_dssp EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTTSSCEE
T ss_pred EEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCCCceEE
Confidence 99999999999999988 9999999999999999999998 3221 122223357766 67897764 34999
Q ss_pred EEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Q 017640 280 LFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 280 l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 359 (368)
+++++++++.+.+...+ ...+.+..+.+++..+++.+.+ +.+.++..++.+++.+.
T Consensus 265 ~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~ 320 (395)
T 1vef_A 265 AVMREEVARSMPKGGHG---------------------TTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEK 320 (395)
T ss_dssp EEEEHHHHHTSCTTSSC---------------------CSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHH
T ss_pred EEehHHHHhhhccCCcC---------------------CCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHH
Confidence 99999888777652110 1125677888888888887765 35678888889999988
Q ss_pred HHhh
Q 017640 360 IQER 363 (368)
Q Consensus 360 l~~~ 363 (368)
|.+.
T Consensus 321 l~~~ 324 (395)
T 1vef_A 321 LRAI 324 (395)
T ss_dssp HHTS
T ss_pred HHHh
Confidence 8765
No 147
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.92 E-value=2.6e-24 Score=204.56 Aligned_cols=174 Identities=20% Similarity=0.222 Sum_probs=148.3
Q ss_pred HHHHHHHHHHHcCCCCCCcEEE--eCCHHHHHHHHHHHccCCCCCCCCEEEEcC-CCCcccHHHH-------HHHHHHcC
Q 017640 113 YELARKKVAAFINASDSGEIVF--TKNATEAINLVAYSWGLSNLKSGDEVILTV-AEHHSAIVPW-------QLVAQKTG 182 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~--t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~-------~~~~~~~g 182 (368)
.+++++.+|+++|.+. .+++ ++|+++|+..++.++ +++||+|++.+ +.|.+....+ ...++..|
T Consensus 75 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~Ai~~al~al----l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G 148 (427)
T 3i16_A 75 RDSLDAVYARVFNTES--ALVRPHFVNGTHALGAALFGN----LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFG 148 (427)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHH----CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGT
T ss_pred HHHHHHHHHHHhCCcc--eEEeCCCccHHHHHHHHHHHH----hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcC
Confidence 6678999999999973 4554 788899999999998 89999999998 8888866433 13345679
Q ss_pred CEEEEEeCCCCCCCCHHHHHHhcc--cCceEEEEcc----cccccccccCHHHHHHHHHh--cCCEEEEecCCcCCcccc
Q 017640 183 ANLKFLNLNDDESPDLDKLKEMLS--RKTKLVVIHH----ISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHMVV 254 (368)
Q Consensus 183 ~~v~~v~~~~~~~~d~~~l~~~l~--~~~~~v~~~~----~~n~tG~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~~~ 254 (368)
++++.++.++++.+|+++|+++++ +++++|++++ ++||||.+.|+++|.++|++ ||+++++|++|+.+....
T Consensus 149 ~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~ 228 (427)
T 3i16_A 149 INYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTK 228 (427)
T ss_dssp CEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSS
T ss_pred CEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccC
Confidence 999999998889999999999998 7899999999 99999999999999999999 999999999999776333
Q ss_pred cCCCCCccEEEecCcCcCCCCc---ceEEEEcccccccCCC
Q 017640 255 DVQGLDADFLVASSHKMCGPTG---IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 255 ~~~~~~~d~~~~s~~K~~g~~G---~G~l~~~~~li~~l~~ 292 (368)
+....+.|++++|+||.+|++| +|++++++++++.++.
T Consensus 229 ~p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~ 269 (427)
T 3i16_A 229 EPTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSY 269 (427)
T ss_dssp CGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred CccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHH
Confidence 3334578999999999888743 6999999999987765
No 148
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.92 E-value=8.6e-25 Score=206.99 Aligned_cols=168 Identities=19% Similarity=0.176 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++|+.+++++|.+ ++++++|+++|+..++. + +++||+|+++.++|++++..+...++..|+++++++
T Consensus 54 ~~~~~~lr~~la~~~g~~---~~i~~~sGt~a~~~al~-~----~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 54 NPNRENLERAVAALENAQ---YGLAFSSGSATTATILQ-S----LPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp CHHHHHHHHHHHHHTTCS---EEEEESCHHHHHHHHHH-T----SCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred ChhHHHHHHHHHHHhCCC---cEEEECChHHHHHHHHH-H----cCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 455778999999999986 45555566999999999 7 789999999999999877666556677799999998
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc----CCEEEEecCCcCCcccccCCCCCccEEE
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV----GAKVLVDACQSVPHMVVDVQGLDADFLV 265 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~----g~~li~D~a~~~~~~~~~~~~~~~d~~~ 265 (368)
.+ | ++|++++++++++|++++++||||.++|+++|.++|++| |+++|+|++|+.+... +...+++|+++
T Consensus 126 ~~-----d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~~~di~~ 198 (393)
T 1n8p_A 126 DL-----L-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNFGADIVV 198 (393)
T ss_dssp SH-----H-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGGTCSEEE
T ss_pred CC-----h-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHcCCeEEE
Confidence 76 7 899999998999999999999999999999999999999 9999999999966542 33345799999
Q ss_pred ecCcCcCCCCc--c-eEEEEc-ccccccCCC
Q 017640 266 ASSHKMCGPTG--I-GFLFGK-SDLLSAMPP 292 (368)
Q Consensus 266 ~s~~K~~g~~G--~-G~l~~~-~~li~~l~~ 292 (368)
.|+||++|++| + |+++++ +++++.+.+
T Consensus 199 ~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~ 229 (393)
T 1n8p_A 199 HSATKYINGHSDVVLGVLATNNKPLYERLQF 229 (393)
T ss_dssp EETTTTTTCSSCCCCEEEEESCHHHHHHHHH
T ss_pred EECcccccCCCCceeEEEEeCCHHHHHHHHH
Confidence 99999999988 6 999985 677766553
No 149
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.92 E-value=3e-24 Score=203.01 Aligned_cols=267 Identities=12% Similarity=0.017 Sum_probs=185.6
Q ss_pred CCeEEeccCCC------CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CC--CCCCcEEE--
Q 017640 66 KKLVYLDNAAT------SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NA--SDSGEIVF-- 134 (368)
Q Consensus 66 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~--~~~~~v~~-- 134 (368)
++++.|..+.+ .++++.+.+++.+.+... ..+ .+.. .....++|+++++++ +. ++ ++|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~--~y~~----~~g~~~lr~~la~~~~~~~~~~-~~v~~~~ 96 (394)
T 2ay1_A 26 QGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETE--TTK--TYAG----LSGEPEFQKAMGELILGDGLKS-ETTATLA 96 (394)
T ss_dssp TTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHC--CCC--CCCC----SSCCHHHHHHHHHHHHGGGCCG-GGEEEEE
T ss_pred ccccccccceeeCCCCCccCcHHHHHHHHHhcCCc--ccC--CCCC----CCCcHHHHHHHHHHHhCCCCCc-ccEEEEe
Confidence 45677777763 256789999998876541 110 1100 122347888899887 54 33 48998
Q ss_pred eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhccc---Cc
Q 017640 135 TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR---KT 209 (368)
Q Consensus 135 t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~---~~ 209 (368)
|+|+++|+..++.++.. +.+||+|++.+|+|++.. ..++..|++++.++.+ .++.+|++++++++++ ++
T Consensus 97 ~~g~~~a~~~~~~~~~~--~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 170 (394)
T 2ay1_A 97 TVGGTGALRQALELARM--ANPDLRVFVSDPTWPNHV----SIMNFMGLPVQTYRYFDAETRGVDFEGMKADLAAAKKGD 170 (394)
T ss_dssp EEHHHHHHHHHHHHHHH--HCTTCCEEEEESCCHHHH----HHHHHHTCCEEEEECEETTTTEECHHHHHHHHHTCCTTC
T ss_pred cCCchhHHHHHHHHHHh--cCCCCEEEEcCCCChhHH----HHHHHcCCceEEEecccccCCccCHHHHHHHHHhCCCCC
Confidence 99999999999987621 248999999999988854 3445569999999986 5677899999999875 36
Q ss_pred eEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-------ccc-CCCCC-ccEEEecCcCcCCCCc-
Q 017640 210 KLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-------VVD-VQGLD-ADFLVASSHKMCGPTG- 276 (368)
Q Consensus 210 ~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-------~~~-~~~~~-~d~~~~s~~K~~g~~G- 276 (368)
+++++++++||||.++| +++|.++|++||+++|+|++|+.... ++. +...+ .+++++|+||.+|++|
T Consensus 171 ~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 250 (394)
T 2ay1_A 171 MVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIYRE 250 (394)
T ss_dssp EEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCGGG
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCcCC
Confidence 78888999999999998 56889999999999999999985322 221 22222 4578889999999888
Q ss_pred -ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----HhCHHHHHH
Q 017640 277 -IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-----TIGMQKIHA 347 (368)
Q Consensus 277 -~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-----~~g~~~i~~ 347 (368)
+|++++ ++++++.+....... .+...++++.....++..+++... ....+.+++
T Consensus 251 riG~~~~~~~~~~~~~~l~~~~~~~-----------------~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~ 313 (394)
T 2ay1_A 251 RTGCLLALCADAATRELAQGAMAFL-----------------NRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRS 313 (394)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHH-----------------HHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCHHHHHHHHHHHHHH-----------------HhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 699998 565443322111000 011112345556666666665431 124678888
Q ss_pred HHHHHHHHHHHHHHhhc
Q 017640 348 YEVKWIICSIIVIQERH 364 (368)
Q Consensus 348 ~~~~l~~~l~~~l~~~~ 364 (368)
+.+++.+++.+.|.+..
T Consensus 314 ~~~~~~~~l~~~L~~~~ 330 (394)
T 2ay1_A 314 GMLRLREQLAGELRDLS 330 (394)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 88999999998888763
No 150
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.92 E-value=1.8e-24 Score=205.89 Aligned_cols=263 Identities=14% Similarity=0.057 Sum_probs=185.2
Q ss_pred CCeEEeccCCC------CCCcHHHHHHHHH-HHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCC------CCCCcE
Q 017640 66 KKLVYLDNAAT------SQKPIAVLKALQN-YYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINA------SDSGEI 132 (368)
Q Consensus 66 ~~~i~l~~~~~------~~~~~~v~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~------~~~~~v 132 (368)
++++.|..+.+ .++++.+.+++.+ .+... ..+ .+. ......++|+.++++++. ++ ++|
T Consensus 29 ~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~--~~~--~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~-~~i 99 (412)
T 1yaa_A 29 ATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSS--YNH--EYL----GITGLPSLTSNAAKIIFGTQSDALQE-DRV 99 (412)
T ss_dssp SSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTT--CCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHT-TCE
T ss_pred CCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcc--ccc--CCC----CCCCcHHHHHHHHHHHhcCCCCCCCc-ceE
Confidence 45566666543 3577899999888 65411 111 110 112244788888888832 23 489
Q ss_pred EE--eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CC-CCCCCHHHHHHhcccC
Q 017640 133 VF--TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-ND-DESPDLDKLKEMLSRK 208 (368)
Q Consensus 133 ~~--t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~l~~~ 208 (368)
++ |+|+++|+.+++..+. .+.+||+|++.+|+|++.. ..++..|++++.++. ++ ++.+|+++|+++++++
T Consensus 100 ~~~~t~g~~~a~~~~~~~~~--~~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 173 (412)
T 1yaa_A 100 ISVQSLSGTGALHISAKFFS--KFFPDKLVYLSKPTWANHM----AIFENQGLKTATYPYWANETKSLDLNGFLNAIQKA 173 (412)
T ss_dssp EEEEEEHHHHHHHHHHHHHH--HHCTTCCEEEEESCCTTHH----HHHHTTTCCEEEEECEETTTTEECHHHHHHHHHHS
T ss_pred EEEeccchHhHHHHHHHHHH--HhCCCCEEEEeCCCCccHH----HHHHHcCceEEEEeeecCCCCccCHHHHHHHHHhC
Confidence 99 9999999999843321 1468999999999999844 445567999999998 43 6778999999998753
Q ss_pred ---ceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc--------ccc-cCCCC-C---ccEEEecCc
Q 017640 209 ---TKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH--------MVV-DVQGL-D---ADFLVASSH 269 (368)
Q Consensus 209 ---~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~--------~~~-~~~~~-~---~d~~~~s~~ 269 (368)
+.++++++++||||.++| +++|.++|++||+++|+|++|.... .++ ++... . .+++++|+|
T Consensus 174 ~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 253 (412)
T 1yaa_A 174 PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFA 253 (412)
T ss_dssp CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECT
T ss_pred CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccC
Confidence 456666999999999998 5678999999999999999996321 122 22222 2 568899999
Q ss_pred CcCCCCc--ceEEE--E-----ccc----ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 270 KMCGPTG--IGFLF--G-----KSD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 270 K~~g~~G--~G~l~--~-----~~~----li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
|.+|++| +|+++ + +++ +++.+.... +....+++.....++..+++.
T Consensus 254 K~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~---------------------~~~~~~~~~~~~~a~~~~l~~ 312 (412)
T 1yaa_A 254 KNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKII---------------------RSEVSNPPAYGAKIVAKLLET 312 (412)
T ss_dssp TTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHH---------------------HTTTSSCCHHHHHHHHHHHHS
T ss_pred CCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHH---------------------hhccCCCChHHHHHHHHHhCC
Confidence 9999988 79998 6 555 555444311 111235577777777777765
Q ss_pred HH-----HhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 337 LS-----TIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 337 ~~-----~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
.. ...++.++++.+++.+++.+.|.+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 313 PELTEQWHKDMVTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 42 12478888999999999999998764
No 151
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.92 E-value=3.4e-25 Score=211.02 Aligned_cols=268 Identities=12% Similarity=0.108 Sum_probs=166.9
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc------CCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI------NASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~t~g~t 139 (368)
+++++|.++.+... +.+.+++.+.+.....++....+..++.......++|+++++++ ++++ ++|++|+|++
T Consensus 31 ~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-~~i~~t~G~t 108 (417)
T 3g7q_A 31 PGAIMLGGGNPAHI-PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-QNIALTNGSQ 108 (417)
T ss_dssp -CCEECSCCCCCCC-HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-GGEEEESCHH
T ss_pred CCceEecCcCCCCC-ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-ccEEEeCCcH
Confidence 57899999876653 33334443333332211110000111212233457777788776 3444 4999999999
Q ss_pred HHHHHHHHHccCCCCCCCC-----EEEEc-CCCCcccHHHHHHHHH--HcCCEEEEEeCCC-CCCCCHHHHHHhcccCce
Q 017640 140 EAINLVAYSWGLSNLKSGD-----EVILT-VAEHHSAIVPWQLVAQ--KTGANLKFLNLND-DESPDLDKLKEMLSRKTK 210 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd-----~vl~~-~~~~~s~~~~~~~~~~--~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~ 210 (368)
+|+.+++.++ +++|| +|+++ +|+|++.......... ..+..+..++.+. ++.+|+++|+ +.++++
T Consensus 109 ~al~~~~~~l----~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~ 182 (417)
T 3g7q_A 109 SAFFYLFNLF----AGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETG 182 (417)
T ss_dssp HHHHHHHHHH----SBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEE
T ss_pred HHHHHHHHHH----cCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccccccCHHHhc--cccCce
Confidence 9999999998 77877 89997 9988775432221101 1233444444331 3567899888 778899
Q ss_pred EEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCccc-----ccCCCCCccEEEecCcCcCCCCc--ceEE
Q 017640 211 LVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHMV-----VDVQGLDADFLVASSHKMCGPTG--IGFL 280 (368)
Q Consensus 211 ~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~-----~~~~~~~~d~~~~s~~K~~g~~G--~G~l 280 (368)
+|++++++||||.++| +++|.++|++||+++|+|++|+..... ......+.+++++|+|| ++++| +|++
T Consensus 183 ~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~~G~r~G~~ 261 (417)
T 3g7q_A 183 MICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGLPGSRCGII 261 (417)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTCTTSCCEEE
T ss_pred EEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccCCCcceEEE
Confidence 9999999999999999 889999999999999999999853221 11122467899999999 57666 9999
Q ss_pred EEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh-CHH-HHHHHHHHHHHHHHH
Q 017640 281 FGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI-GMQ-KIHAYEVKWIICSII 358 (368)
Q Consensus 281 ~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~-g~~-~i~~~~~~l~~~l~~ 358 (368)
+.++++++.+......+ ..+.+.....++...++..... ... .++++..+..+.+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T 3g7q_A 262 IANDKTITAIANMNGII---------------------SLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIA 320 (417)
T ss_dssp ECCHHHHHHHHHHHHHH---------------------CCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHHHhhcce---------------------eeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99998887766433211 1133444444444444311100 011 255666677777777
Q ss_pred HHHhh
Q 017640 359 VIQER 363 (368)
Q Consensus 359 ~l~~~ 363 (368)
.|.+.
T Consensus 321 ~l~~~ 325 (417)
T 3g7q_A 321 IIRRY 325 (417)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77653
No 152
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.92 E-value=5e-23 Score=193.27 Aligned_cols=254 Identities=15% Similarity=0.125 Sum_probs=178.0
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|.+. .+++++.+.+++.+.+.... ++.. .+. .....++++++++++|.+ +++++|+|+++
T Consensus 27 g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~-~~~~-~y~-----~~~~~~l~~~la~~~g~~--~~v~~~~g~t~ 97 (375)
T 2eh6_A 27 GKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLL-HVSN-LYE-----NPWQEELAHKLVKHFWTE--GKVFFANSGTE 97 (375)
T ss_dssp CCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCS-CCCT-TBC-----CHHHHHHHHHHHHTSSSC--EEEEEESSHHH
T ss_pred CCEEEEcCCcccccccCCCCHHHHHHHHHHHHhcc-ccCc-ccC-----CHHHHHHHHHHHhhcCCC--CeEEEeCchHH
Confidence 335666653 22378999999999887642 2111 111 234568999999999983 48999999999
Q ss_pred HHHHHHHHccCCCC---CCC-CEEEEcCCCCcccHHHHHHHHHH----cCCE-----EEEEeCCCCCCCCHHHHHHhccc
Q 017640 141 AINLVAYSWGLSNL---KSG-DEVILTVAEHHSAIVPWQLVAQK----TGAN-----LKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 141 a~~~~~~~~~~~~~---~~g-d~vl~~~~~~~s~~~~~~~~~~~----~g~~-----v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
|+..++.++. ... ++| |+|++.+++|++........... .+.. +..++. .|+++|++++++
T Consensus 98 a~~~~~~~~~-~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~ 171 (375)
T 2eh6_A 98 SVEAAIKLAR-KYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-----NDIDSVYKLLDE 171 (375)
T ss_dssp HHHHHHHHHH-HHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-----TCHHHHHTTCCT
T ss_pred HHHHHHHHHH-HHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-----chHHHHHHHhcC
Confidence 9999987520 003 678 99999999988865444332100 0111 444443 389999999998
Q ss_pred CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc--ccCCCCC--ccEEEecCcCcCC-CCcc
Q 017640 208 KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--VDVQGLD--ADFLVASSHKMCG-PTGI 277 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--~~~~~~~--~d~~~~s~~K~~g-~~G~ 277 (368)
++++|++++++||||.+.| +++|.++|++||+++|+|++|+ ++... ++....+ +|++++ +|.++ +.++
T Consensus 172 ~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~--SK~~~~g~~~ 249 (375)
T 2eh6_A 172 ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIAL--AKGLGGGVPI 249 (375)
T ss_dssp TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTSCC
T ss_pred CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEE--cccccCCCCe
Confidence 9999999999999999988 9999999999999999999999 54432 2233334 787754 49665 3458
Q ss_pred eEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 017640 278 GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSI 357 (368)
Q Consensus 278 G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~ 357 (368)
|++++++++++.+++...+. ..++ +.....++..+++.+. .+.++.+++.+++.
T Consensus 250 G~~~~~~~~~~~~~~~~~~~--------------------~~~~-~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~l~ 303 (375)
T 2eh6_A 250 GAILAREEVAQSFTPGSHGS--------------------TFGG-NPLACRAGTVVVDEVE-----KLLPHVREVGNYFK 303 (375)
T ss_dssp EEEEEEHHHHTTCCTTSCCC--------------------SSTT-CHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred EEEEEcHHHHhhhcCCCCCC--------------------CCCC-CHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 99999999888777532211 1123 4555555556666554 66788888899999
Q ss_pred HHHHhh
Q 017640 358 IVIQER 363 (368)
Q Consensus 358 ~~l~~~ 363 (368)
+.|.++
T Consensus 304 ~~L~~~ 309 (375)
T 2eh6_A 304 EKLKEL 309 (375)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888775
No 153
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.92 E-value=6.4e-24 Score=201.62 Aligned_cols=170 Identities=22% Similarity=0.255 Sum_probs=143.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
+...++++.+++++|.+ +.|++++| ++|+..++. + +++||+|+++++.|++++..+...++..|+++++++.
T Consensus 67 p~~~~l~~~la~~~g~~--~~i~~~sG-~~ai~~~~~-l----~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 138 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK--YCLAFASG-LAATVTITH-L----LKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDC 138 (403)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESCH-HHHHHHHHT-T----SCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred chHHHHHHHHHHHhCCC--cEEEECCH-HHHHHHHHH-H----hCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECC
Confidence 44668999999999986 35666655 689999988 7 7899999999999999887777777788999999998
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC-CEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG-AKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g-~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
+ |+++|++++++++++|++++++||||.++|+++|.++|++|| +++|+|++|+.+.....+ ..+.|+++.|++
T Consensus 139 ~-----d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~-~~~~div~~S~s 212 (403)
T 3cog_A 139 S-----KIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPL-ALGADISMYSAT 212 (403)
T ss_dssp T-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTT-TTTCSEEEEETT
T ss_pred C-----CHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcc-ccCCeEEEEcCh
Confidence 6 899999999999999999999999999999999999999999 999999999977532222 257999999999
Q ss_pred CcCCCCc---ceEEEEc-ccccccCCCcc
Q 017640 270 KMCGPTG---IGFLFGK-SDLLSAMPPFL 294 (368)
Q Consensus 270 K~~g~~G---~G~l~~~-~~li~~l~~~~ 294 (368)
|++|.+| +|+++++ +++++.+++..
T Consensus 213 K~~~g~~~~~~G~v~~~~~~l~~~l~~~~ 241 (403)
T 3cog_A 213 KYMNGHSDVVMGLVSVNCESLHNRLRFLQ 241 (403)
T ss_dssp TTTTCSSCCCCEEEEECCHHHHHHHHHHH
T ss_pred hhccCCCCCeEEEEEECcHHHHHHHHHHH
Confidence 9877544 5999995 67777666443
No 154
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.92 E-value=1.1e-23 Score=205.20 Aligned_cols=251 Identities=15% Similarity=0.180 Sum_probs=175.5
Q ss_pred cHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-----CCC-CCCcEEEeCCHHHHHHHHHHHccCCC
Q 017640 80 PIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-----NAS-DSGEIVFTKNATEAINLVAYSWGLSN 153 (368)
Q Consensus 80 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-----~~~-~~~~v~~t~g~t~a~~~~~~~~~~~~ 153 (368)
|..+.+++.+.+....... .+.+.. .....++|+++++++ |.+ .+++|++|+|+++++.+++.++
T Consensus 103 P~~~~~~~~~~l~~~~~~~-~~~Y~~----~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l---- 173 (498)
T 3ihj_A 103 PEDAKKRARRILQACGGNS-LGSYSA----SQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKIL---- 173 (498)
T ss_dssp CHHHHHHHHHHHHHC---------------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHhccCCC-CCCCCC----CCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHH----
Confidence 5556666666665532100 011111 122234555555554 353 2359999999999999999998
Q ss_pred CCCCC----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhccc-----CceEEEEcccccccc
Q 017640 154 LKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSR-----KTKLVVIHHISNMLA 222 (368)
Q Consensus 154 ~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~-----~~~~v~~~~~~n~tG 222 (368)
+++|| .|+++.|+|++. ...++..|++++.++++++ +.+|+++|++++++ ++++|++++++||||
T Consensus 174 ~~~gd~~~d~Vlv~~p~y~~~----~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG 249 (498)
T 3ihj_A 174 VSGGGKSRTGVMIPIPQYPLY----SAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTG 249 (498)
T ss_dssp CCCCGGGSEEEEEEESCCTHH----HHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTC
T ss_pred cCCCCCCCCEEEEeCCCchhH----HHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCC
Confidence 77765 999999999874 4445567999999998854 68899999999976 589999999999999
Q ss_pred cccC---HHHHHHHHHhcCCEEEEecCCcCCccc-----ccCCC-----------CCccEEEecCcCcC-CCCc--ceEE
Q 017640 223 SILP---IEEIVHWSHDVGAKVLVDACQSVPHMV-----VDVQG-----------LDADFLVASSHKMC-GPTG--IGFL 280 (368)
Q Consensus 223 ~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~~-----~~~~~-----------~~~d~~~~s~~K~~-g~~G--~G~l 280 (368)
.+++ +++|+++|++||+++|+|++|+..... .++.. ....++++|+||.| |.+| +||+
T Consensus 250 ~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~ 329 (498)
T 3ihj_A 250 QVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYM 329 (498)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEE
T ss_pred CcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEE
Confidence 9999 677999999999999999999853321 11110 01236788999987 7677 8999
Q ss_pred E---EcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-----------HHHHhCHHHHH
Q 017640 281 F---GKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID-----------YLSTIGMQKIH 346 (368)
Q Consensus 281 ~---~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~-----------~~~~~g~~~i~ 346 (368)
+ .++++++.+..... ...+++.....++..+++ +... .+.++
T Consensus 330 ~~~~~~~~l~~~l~~~~~----------------------~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~--~~~~~ 385 (498)
T 3ihj_A 330 EVINLHPEIKGQLVKLLS----------------------VRLCPPVSGQAAMDIVVNPPVAGEESFEQFSRE--KESVL 385 (498)
T ss_dssp EEESCCHHHHHHHHHHHH----------------------HSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHH--HHHHH
T ss_pred EEecCCHHHHHHHHHHHh----------------------ccCCCCHHHHHHHHHHhcCCccCcccHHHHHHH--HHHHH
Confidence 8 47777766553321 012567777777776663 2222 46778
Q ss_pred HHHHHHHHHHHHHHHhhcCCC
Q 017640 347 AYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~~g~t 367 (368)
++..+.++++.+.|.+++|++
T Consensus 386 ~~l~~~~~~l~~~L~~~~g~~ 406 (498)
T 3ihj_A 386 GNLAKKAKLTEDLFNQVPGIH 406 (498)
T ss_dssp HHHHHHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHHHhcCCCcE
Confidence 888999999999998876654
No 155
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.91 E-value=1.2e-23 Score=202.49 Aligned_cols=226 Identities=14% Similarity=0.075 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHc-CCCC----CCcEEE--eCCHHHHHHHHH--HHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC
Q 017640 113 YELARKKVAAFI-NASD----SGEIVF--TKNATEAINLVA--YSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA 183 (368)
Q Consensus 113 ~~~~r~~la~~~-~~~~----~~~v~~--t~g~t~a~~~~~--~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 183 (368)
..++|+++++++ |.+. +++|++ |+|+++|+.+++ .++ +.+||+|++++|+|++....+...++..|+
T Consensus 96 ~~~lr~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~----~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~ 171 (448)
T 3meb_A 96 FPLFLEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHL----WMPKAEFYMPSTTWPNHYGIYDKVFNKLKV 171 (448)
T ss_dssp CHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHH----HCTTCCEEEESSCCTHHHHHHHHHHCTTTS
T ss_pred hHHHHHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHH----hCCCCEEEECCCCCHhHHHHHHhhHHhCCC
Confidence 447899999987 7762 348999 999999998843 444 679999999999998865444322226799
Q ss_pred EEEEEeC-CCC--CCCCHHHHHHhccc---CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCc-cc
Q 017640 184 NLKFLNL-NDD--ESPDLDKLKEMLSR---KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPH-MV 253 (368)
Q Consensus 184 ~v~~v~~-~~~--~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~-~~ 253 (368)
+++.++. +++ +.+|+++|++++++ +++++++++++||||.+++ +++|+++|++||+++|+|++|.... ..
T Consensus 172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~ 251 (448)
T 3meb_A 172 PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGS 251 (448)
T ss_dssp CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSC
T ss_pred eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCC
Confidence 9999998 554 88999999999974 5788899999999999999 5569999999999999999987322 11
Q ss_pred c-----cC----CCCCccEEEecCcCcCCCCc--ceEE--EE--------c-c----cccccCCCcccCCcceeecccCC
Q 017640 254 V-----DV----QGLDADFLVASSHKMCGPTG--IGFL--FG--------K-S----DLLSAMPPFLGGGEMISDVFLDH 307 (368)
Q Consensus 254 ~-----~~----~~~~~d~~~~s~~K~~g~~G--~G~l--~~--------~-~----~li~~l~~~~~g~~~~~~~~~~~ 307 (368)
. .+ ......+++.|+||.||++| +|++ ++ + + ++++.+....
T Consensus 252 ~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~------------- 318 (448)
T 3meb_A 252 FEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQI------------- 318 (448)
T ss_dssp HHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHH-------------
T ss_pred cccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHH-------------
Confidence 1 01 11235578999999999888 8998 66 4 3 4444333211
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---H--hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 308 STFADPPSRFEAGTPAIGEAIGLGAAIDYLS---T--IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 308 ~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~---~--~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+....+++.....++..+++... . ..++.++++..++++++.+.|.++
T Consensus 319 --------~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 319 --------RKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp --------HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------hcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11122556666666666654321 1 136788889999999999999876
No 156
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=1.2e-23 Score=200.59 Aligned_cols=267 Identities=15% Similarity=0.111 Sum_probs=183.0
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLK 155 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~ 155 (368)
..++++.+.+++.+.+....... .+ +. .+..+..+++++.+++++|.+ ++++++|+|+|+..++.++ .++
T Consensus 11 ~~~~~~~~~~a~~~~~~~~~~~~-~~-~~--~g~~~l~~~l~~~la~~~g~~---~~i~~~~gt~al~~~~~~~---~~~ 80 (418)
T 2c81_A 11 WPQHSDRTRRKIEEVFQSNRWAI-SG-YW--TGEESMERKFAKAFADFNGVP---YCVPTTSGSTALMLALEAL---GIG 80 (418)
T ss_dssp SSCCCHHHHHHHHHHHHHTCCST-TS-BC--CSSCCHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHT---TCC
T ss_pred CCCCCHHHHHHHHHHHhcCCccc-cC-cc--cCCHHHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHHHHHc---CCC
Confidence 34668999999999887632110 11 11 112445678999999999986 5677888899999999987 368
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHH
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWS 234 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~ 234 (368)
+||+|+++.++|++.... ++..|++++.+++++ ++.+|+++|++++++++++|+++ ||||...++++|.++|
T Consensus 81 ~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~---~~~G~~~~~~~i~~~~ 153 (418)
T 2c81_A 81 EGDEVIVPSLTWIATATA----VLNVNALPVFVDVEADTYCIDPQLIKSAITDKTKAIIPV---HLFGSMANMDEINEIA 153 (418)
T ss_dssp TTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTCSBCHHHHGGGCCTTEEEECCB---CCTTCCCCHHHHHHHH
T ss_pred CcCEEEECCCccHhHHHH----HHHcCCEEEEEecCCCCCCcCHHHHHHhhCCCCeEEEEe---CCcCCcccHHHHHHHH
Confidence 999999999999996544 446699999999986 68899999999999889988875 4799999999999999
Q ss_pred HhcCCEEEEecCCcCCcc-cc-cCCCCCccEEEecC--cCcCCCCcceEEEEc-ccccccCCCcccCCcceeecccCCCC
Q 017640 235 HDVGAKVLVDACQSVPHM-VV-DVQGLDADFLVASS--HKMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHST 309 (368)
Q Consensus 235 ~~~g~~li~D~a~~~~~~-~~-~~~~~~~d~~~~s~--~K~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~ 309 (368)
++||+++|+|++|+.+.. .. ..... .|+.+.|+ ||.+|+..+|+++.+ +++++.+++...++........
T Consensus 154 ~~~~~~li~D~a~~~~~~~~~~~~~~~-~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~---- 228 (418)
T 2c81_A 154 QEHNLFVIEDCAQSHGSVWNNQRAGTI-GDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSS---- 228 (418)
T ss_dssp HHTTCEEEEECTTCTTCEETTEETTSS-SSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGG----
T ss_pred HHCCCEEEEECcccccCccCCEecccc-cceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCcccccccc----
Confidence 999999999999998763 11 12222 35666666 999888338899885 6777666654433322110000
Q ss_pred CCCCCCCCC--CCCCCHHH----HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 310 FADPPSRFE--AGTPAIGE----AIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 310 ~~~~~~~~~--~gt~~~~~----~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.....+. .|++.+.+ +..+.+++.......++.+.++..++.+++.+.|.+++|+
T Consensus 229 --~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~ 289 (418)
T 2c81_A 229 --ELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELDDKNAIREKNAMFLNDALSKIDGI 289 (418)
T ss_dssp --GCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTE
T ss_pred --ccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 0001111 11111110 0011122222222356778888889999999999887664
No 157
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.91 E-value=1.6e-23 Score=197.94 Aligned_cols=254 Identities=13% Similarity=0.123 Sum_probs=180.0
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
.|+.+.+++.+.+...... ..+...++++.+++++|.+ ++++++|+++|+..++.++ .+++||
T Consensus 18 ~~~~~~~a~~~~~~~~~~~-----------~~~~~~~l~~~la~~~~~~---~~~~~~~gt~al~~~~~~~---~~~~gd 80 (393)
T 1mdo_A 18 MGAEELAAVKTVLDSGWIT-----------TGPKNQELEAAFCRLTGNQ---YAVAVSSATAGMHIALMAL---GIGEGD 80 (393)
T ss_dssp CCHHHHHHHHHHHHHTCCS-----------SSHHHHHHHHHHHHHHCCS---EEEEESCHHHHHHHHHHHT---TCCTTC
T ss_pred CCHHHHHHHHHHHhcCCcC-----------CChHHHHHHHHHHHHhCCC---cEEEecChHHHHHHHHHHc---CCCCCC
Confidence 5678888888887653111 0245668999999999975 7899999999999999987 368999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|++++++|++... .++..|++++.++.+++ +.+|+++|++++++++++|++++ |||.+.++++|.++|+++
T Consensus 81 ~Vl~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~ 153 (393)
T 1mdo_A 81 EVITPSMTWVSTLN----MIVLLGANPVMVDVDRDTLMVTPEHIEAAITPQTKAIIPVH---YAGAPADLDAIYALGERY 153 (393)
T ss_dssp EEEEESSSCHHHHH----HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEECCBC---GGGCCCCHHHHHHHHHHH
T ss_pred EEEeCCCccHhHHH----HHHHCCCEEEEEeccCCcCCCCHHHHHHhcCCCceEEEEeC---CCCCcCCHHHHHHHHHHc
Confidence 99999999998654 34567999999998865 68999999999988899988764 799999999999999999
Q ss_pred CCEEEEecCCcCCcccccCCCCC-ccEEEecCc--CcCCCCcceEEEEc-ccccccCCCcccCCcceeecccCCCCCCCC
Q 017640 238 GAKVLVDACQSVPHMVVDVQGLD-ADFLVASSH--KMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDVFLDHSTFADP 313 (368)
Q Consensus 238 g~~li~D~a~~~~~~~~~~~~~~-~d~~~~s~~--K~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~~~~~~~~~~~ 313 (368)
|+++|+|++|+.|... +....+ .|++++|+| |++++..+|+++.+ +++++.+++...++.... ..... ....
T Consensus 154 ~~~li~D~a~~~g~~~-~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~--~~~~ 229 (393)
T 1mdo_A 154 GIPVIEDAAHATGTSY-KGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVD-AWDRQ--SGGR 229 (393)
T ss_dssp TCCBCEECTTCTTCEE-TTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC------------
T ss_pred CCeEEEECccccCCeE-CCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCccc-chhhh--cccc
Confidence 9999999999987542 222234 899999999 87765448999986 677776664433322111 00000 0111
Q ss_pred CCCCC---CCC-CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 314 PSRFE---AGT-PAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 314 ~~~~~---~gt-~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
...++ .|+ .....+ +...++..+. +++.+.++..++.+++.+.|.++
T Consensus 230 ~~~~~~~~~g~~~~~~~~-~~a~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~ 280 (393)
T 1mdo_A 230 APQAEVLAPGYKYNLPDL-NAAIALAQLQ--KLDALNARRAAIAAQYHQAMADL 280 (393)
T ss_dssp --CCEESSCCCBCCCCHH-HHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccCccCCCCHH-HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC
Confidence 12221 222 111112 1222222222 46777888888999999999875
No 158
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.91 E-value=2e-23 Score=197.36 Aligned_cols=264 Identities=16% Similarity=0.122 Sum_probs=183.8
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
++++.+..+.+ ..++.+.+++.+.+.... . . ...+...++|+.++++++.+ ++++++|+|+|+..+
T Consensus 22 ~~~~~l~~~~p-~~~~~~~~a~~~~~~~~~-~------~---~~~~~~~~l~~~la~~~~~~---~~i~~~~gt~al~~~ 87 (391)
T 3dr4_A 22 SDLPRISVAAP-RLDGNERDYVLECMDTTW-I------S---SVGRFIVEFEKAFADYCGVK---HAIACNNGTTALHLA 87 (391)
T ss_dssp ------CCCCC-CCCSSHHHHHHHHHHHTC-C------S---SCSHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHH
T ss_pred CCCceeccCCC-CCCHHHHHHHHHHHHcCC-c------c---CCChHHHHHHHHHHHHhCCC---cEEEeCCHHHHHHHH
Confidence 45567776655 456788888887776421 1 0 01345668999999999986 789999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhcccCceEEEEcccccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DDESPDLDKLKEMLSRKTKLVVIHHISNMLASI 224 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~ 224 (368)
+.++ .+++||+|++++++|++.... ++..|++++.++++ +++.+|+++|++++++++++|++ +||||..
T Consensus 88 l~~~---~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~---~n~tG~~ 157 (391)
T 3dr4_A 88 LVAM---GIGPGDEVIVPSLTYIASANS----VTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMP---VHLYGQI 157 (391)
T ss_dssp HHHH---TCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTCSBCGGGSGGGCCTTEEEECC---BCGGGCC
T ss_pred HHHc---CCCCcCEEEECCCchHHHHHH----HHHCCCEEEEEecCccccCcCHHHHHHhcCCCceEEEE---ECCCCCh
Confidence 9988 478999999999999996544 44569999999998 56889999999999988888884 5789999
Q ss_pred cCHHHHHHHHHhcCCEEEEecCCcCCcccccC--CCCCccEEEec--CcCcCCCCcceEEEEccc-ccccCCCcccCCcc
Q 017640 225 LPIEEIVHWSHDVGAKVLVDACQSVPHMVVDV--QGLDADFLVAS--SHKMCGPTGIGFLFGKSD-LLSAMPPFLGGGEM 299 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~--~~~~~d~~~~s--~~K~~g~~G~G~l~~~~~-li~~l~~~~~g~~~ 299 (368)
.|+++|.++|++||+++|+|++|+.|....+. ... .|+.+.| .+|.+++..+|+++.+++ +.+.+++...++..
T Consensus 158 ~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~-~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~ 236 (391)
T 3dr4_A 158 CDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSL-GDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMD 236 (391)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSS-SSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCC
T ss_pred hhHHHHHHHHHHcCCEEEEECcccccceECCeeeccc-CCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999987653322 222 3666666 558887633788877654 55555544333222
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 017640 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNTT 367 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~t 367 (368)
.. ..+......+.. .+..+.+++.+....+++.+.++.+++.+++.+.|.++ |++
T Consensus 237 ~~------~~~~~~~~g~~~------~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 291 (391)
T 3dr4_A 237 PN------RRYWFPIVGFNY------RMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNR 291 (391)
T ss_dssp TT------STTCCSSCCCBC------BCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTS
T ss_pred CC------Cccccccccccc------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-Ccc
Confidence 10 000000011111 12233344444444567888999999999999999887 643
No 159
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.91 E-value=1.1e-23 Score=200.33 Aligned_cols=264 Identities=14% Similarity=0.012 Sum_probs=187.2
Q ss_pred CCeEEeccCCC------CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CC-----CCCCcEE
Q 017640 66 KKLVYLDNAAT------SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NA-----SDSGEIV 133 (368)
Q Consensus 66 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~-----~~~~~v~ 133 (368)
++++.|..+.+ .++++.+.+++.+.+... ...+ .+. ......++|+++++++ +. ++ ++|+
T Consensus 30 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~--~y~----~~~g~~~lr~~la~~~~~~~~~~~~~-~~v~ 101 (412)
T 1ajs_A 30 PRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNS-SLNH--EYL----PILGLAEFRTCASRLALGDDSPALQE-KRVG 101 (412)
T ss_dssp TTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCT-TCCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHT-TCEE
T ss_pred CCceeeccceecCCCCCccccHHHHHHHHHhhhCh-hhcc--CCC----CCCCCHHHHHHHHHHHhcCCCCccCC-CcEE
Confidence 56677777763 356688999988776221 0110 010 0122347999999998 43 33 4899
Q ss_pred E--eCCHHHHHHHHHHHccCCCCCCC-----CEEEEcCCCCcccHHHHHHHHHHcCCE-EEEEeCC--CCCCCCHHHHHH
Q 017640 134 F--TKNATEAINLVAYSWGLSNLKSG-----DEVILTVAEHHSAIVPWQLVAQKTGAN-LKFLNLN--DDESPDLDKLKE 203 (368)
Q Consensus 134 ~--t~g~t~a~~~~~~~~~~~~~~~g-----d~vl~~~~~~~s~~~~~~~~~~~~g~~-v~~v~~~--~~~~~d~~~l~~ 203 (368)
+ |+|+++|+.+++..+. .+++| |+|++.+|+|++. ...++..|++ ++.++.+ .++.+|+++|++
T Consensus 102 ~~~t~gg~~a~~~~~~~~~--~~~~g~~~~~d~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~ 175 (412)
T 1ajs_A 102 GVQSLGGTGALRIGAEFLA--RWYNGTNNKDTPVYVSSPTWENH----NGVFTTAGFKDIRSYRYWDTEKRGLDLQGFLS 175 (412)
T ss_dssp EEEEEHHHHHHHHHHHHHH--HHSSSSSCCCSCEEEEESCCTHH----HHHHHHTTCSCEEEEECEETTTTEECHHHHHH
T ss_pred EEECCCcHHHHHHHHHHHH--HhCcCcCCCCCeEEEcCCCcHHH----HHHHHHcCCceeEEEeeecCCCCccCHHHHHH
Confidence 9 9999999999965321 15688 9999999999884 4445667999 9999984 457789999999
Q ss_pred hccc---CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCc-CCcc-------ccc-CC-CCCccEEEec
Q 017640 204 MLSR---KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQS-VPHM-------VVD-VQ-GLDADFLVAS 267 (368)
Q Consensus 204 ~l~~---~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~-------~~~-~~-~~~~d~~~~s 267 (368)
++++ +++++++++++||||.++| +++|.++|++||+++|+|++|. ++.. ++. +. ..+.++++.|
T Consensus 176 ~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 255 (412)
T 1ajs_A 176 DLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQS 255 (412)
T ss_dssp HHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEE
T ss_pred HHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEe
Confidence 9875 6788889999999999988 5689999999999999999976 3221 121 21 1234588999
Q ss_pred CcCcCCCCc--ceEEEE---ccccc----ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 268 SHKMCGPTG--IGFLFG---KSDLL----SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 268 ~~K~~g~~G--~G~l~~---~~~li----~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
+||.+|++| +|++++ +++++ +.+.... +...++++.....++..+++...
T Consensus 256 ~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~a~~~~l~~~~ 314 (412)
T 1ajs_A 256 FSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIV---------------------RVTWSNPPAQGARIVARTLSDPE 314 (412)
T ss_dssp CTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHH---------------------HTTTSSCCSHHHHHHHHHHHSHH
T ss_pred cccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHH---------------------hcccCCCChHHHHHHHHHHcCcc
Confidence 999999988 899999 77633 2222111 11122456666777777777542
Q ss_pred -----HhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 339 -----TIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 339 -----~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
...++.++++.+++.+++.+.|.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 315 LFHEWTGNVKTMADRILSMRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 22467888899999999999998763
No 160
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=8.8e-23 Score=192.88 Aligned_cols=254 Identities=15% Similarity=0.145 Sum_probs=185.1
Q ss_pred EEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 69 VYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 69 i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
-|+|..+ .+..++.+.+++.+.+......... ...+...++++.+++++|. +++++++|+++|+
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-------~~~~~~~~l~~~la~~~g~---~~v~~~~~gt~a~ 106 (392)
T 3ruy_A 37 RYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRA-------FHSDQLGPWYEKVAKLTNK---EMVLPMNTGAEAV 106 (392)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTT-------SEETTHHHHHHHHHHHHTC---SEEEEESSHHHHH
T ss_pred EEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccc-------cCCHHHHHHHHHHHHhcCC---CEEEEeCcHHHHH
Confidence 4666653 3346899999999888654221110 1134456899999999983 3899999999999
Q ss_pred HHHHHHccCC-----CC-CCCCEEEEcCCCCcccHHHHHHHHHHc---------CCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 143 NLVAYSWGLS-----NL-KSGDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 143 ~~~~~~~~~~-----~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
..++..+... .. ..+|.|++.+++|++............ ..++..++.+ |+++|++++++
T Consensus 107 ~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~ 181 (392)
T 3ruy_A 107 ETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG-----DLEALKAAITP 181 (392)
T ss_dssp HHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT-----CHHHHHHHCCT
T ss_pred HHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc-----cHHHHHHHhcc
Confidence 9999876210 00 236799999999998765443321110 0125555544 89999999999
Q ss_pred CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCC--Cc
Q 017640 208 KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP--TG 276 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~--~G 276 (368)
++++|++++++||||.++| +++|.++|++||+++|+|++|+ ++.. ..+.....+|++++ +|.+++ ..
T Consensus 182 ~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~--SK~l~gG~~~ 259 (392)
T 3ruy_A 182 NTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYIL--GKALGGGVFP 259 (392)
T ss_dssp TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGGTTTSC
T ss_pred CeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEE--chhhhCChhh
Confidence 9999999999999999999 9999999999999999999996 3321 22222345677755 597665 33
Q ss_pred ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
+|++++++++++.+.+...+.. .+.+....+++..+++.+.. +.+.++.+++.+++
T Consensus 260 ~G~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l 315 (392)
T 3ruy_A 260 ISCAAANRDILGVFEPGSHGST---------------------FGGNPLACAVSIAALEVLEE---EKLTERSLQLGEKL 315 (392)
T ss_dssp CEEEEECHHHHTTCCTTSSCCS---------------------STTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHH
T ss_pred hEEEEECHHHHhhhccCCcCCC---------------------CCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHH
Confidence 8999999998887776543222 26788888888888887765 56788899999999
Q ss_pred HHHHHhh
Q 017640 357 IIVIQER 363 (368)
Q Consensus 357 ~~~l~~~ 363 (368)
.+.|.++
T Consensus 316 ~~~L~~~ 322 (392)
T 3ruy_A 316 VGQLKEI 322 (392)
T ss_dssp HHHHTTC
T ss_pred HHHHHHh
Confidence 9998875
No 161
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.91 E-value=4.1e-24 Score=201.06 Aligned_cols=219 Identities=15% Similarity=0.093 Sum_probs=164.1
Q ss_pred CeEEeccCC-CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 67 KLVYLDNAA-TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 67 ~~i~l~~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
.++.+..++ ..++++.+++++.. + . ++ ....+.+++.+++++|.++++++++++|+++|+..+
T Consensus 29 ~v~~~~~~~~~~~~~~~v~~a~~~----~-~---------~~--~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~ 92 (374)
T 2aeu_A 29 ALYDLSGLSGGFLIDEKDKALLNT----Y-I---------GS--SYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILAT 92 (374)
T ss_dssp GCEECSSCCCCCCCCHHHHHHHTS----T-T---------HH--HHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHH
T ss_pred ceeeecccCCCCCCCHHHHHHHHH----h-c---------Cc--hHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHH
Confidence 445444443 44889999988851 1 1 11 122356778888999985334889999999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceE-EEEcccccccc-c
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKL-VVIHHISNMLA-S 223 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~-v~~~~~~n~tG-~ 223 (368)
+.++ +||+|++++|+|++....+. .++..|++++.+ .|+++|+++ ++++++ |++++++|||| .
T Consensus 93 ~~~~------~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v-------~d~~~l~~~-~~~~~~~v~~~~p~nptG~~ 157 (374)
T 2aeu_A 93 ILAL------KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES-------DKVGEILNK-IDKDTLVIITGSTMDLKVIE 157 (374)
T ss_dssp HHHH------CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE-------SCHHHHHTT-CCTTEEEEEECBCTTSCBCC
T ss_pred HHhC------CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe-------CCHHHHHhc-CCCccEEEEEccCCCCCCCC
Confidence 9864 89999999999988765454 567789999888 289999998 778999 99999999999 7
Q ss_pred ccCHHHHHHHHHhcCCEEEEecCCcCCcc-cc-c--CCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcc
Q 017640 224 ILPIEEIVHWSHDVGAKVLVDACQSVPHM-VV-D--VQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEM 299 (368)
Q Consensus 224 ~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~-~--~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~ 299 (368)
..++++|.++|++||+++|+|++|+.+.. +. . ....++|++++|+||.+++.++|++++++++++.++.....
T Consensus 158 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~~~~~--- 234 (374)
T 2aeu_A 158 LENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEGPRGGLLAGKKELVDKIYIEGTK--- 234 (374)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSSCSCEEEEEEHHHHHHHHHHHHT---
T ss_pred cccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccCcceEEEEECHHHHHHHHHhhcc---
Confidence 88899999999999999999999975431 11 1 11246899999999987656789999999988876643211
Q ss_pred eeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 300 ISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
+ .++++.....++..+++.+
T Consensus 235 -----------------~-~~~~~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 235 -----------------F-GLEAQPPLLAGIYRALKNF 254 (374)
T ss_dssp -----------------T-TCBCCHHHHHHHHHHHHHC
T ss_pred -----------------c-cCCCCHHHHHHHHHHHHHH
Confidence 1 1256666777777777654
No 162
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.91 E-value=3.4e-23 Score=195.44 Aligned_cols=251 Identities=18% Similarity=0.096 Sum_probs=174.4
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
.++.+.+++.+.+... .. . +...+...++|+.+++++|.+ +.|++++| |+|+.+++.++ .+++||
T Consensus 15 ~~~~~~~a~~~~l~~~--~~---~----~~~~~~~~~l~~~la~~~~~~--~~i~~~sG-t~al~~~l~~l---~~~~gd 79 (388)
T 1b9h_A 15 YDDAERNGLVRALEQG--QW---W----RMGGDEVNSFEREFAAHHGAA--HALAVTNG-THALELALQVM---GVGPGT 79 (388)
T ss_dssp CCHHHHHHHHHHHHTS--CC---B----TTTCSHHHHHHHHHHHHTTCS--EEEEESCH-HHHHHHHHHHT---TCCTTC
T ss_pred CCHHHHHHHHHHHHcC--Ce---e----ecCCHHHHHHHHHHHHHhCCC--eEEEeCCH-HHHHHHHHHHc---CCCCcC
Confidence 4589999998887652 00 0 111245668999999999986 35666655 89999999987 368999
Q ss_pred EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhc
Q 017640 159 EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDV 237 (368)
Q Consensus 159 ~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~ 237 (368)
+|++++++|++... .++..|++++.++++++ +.+|+++|++++++++++|+ ++||||.+.|+++|.++|++|
T Consensus 80 ~Vi~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~ 152 (388)
T 1b9h_A 80 EVIVPAFTFISSSQ----AAQRLGAVTVPVDVDAATYNLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADT 152 (388)
T ss_dssp EEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHH
T ss_pred EEEECCCccHHHHH----HHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHc
Confidence 99999999999654 34567999999999864 88999999999988888877 889999999999999999999
Q ss_pred CCEEEEecCCcCCccc--ccCCCCCccEEEecCc--CcCCCCcceEEEEccc-c--cccCCCcccCCcceeecccCCCCC
Q 017640 238 GAKVLVDACQSVPHMV--VDVQGLDADFLVASSH--KMCGPTGIGFLFGKSD-L--LSAMPPFLGGGEMISDVFLDHSTF 310 (368)
Q Consensus 238 g~~li~D~a~~~~~~~--~~~~~~~~d~~~~s~~--K~~g~~G~G~l~~~~~-l--i~~l~~~~~g~~~~~~~~~~~~~~ 310 (368)
|+++|+|++|+.|... .++..++ |+.++|++ |.+++..+|+++++++ + ++.++....+ +... ....+
T Consensus 153 ~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~ 226 (388)
T 1b9h_A 153 GVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSC-GRPR----DDRRY 226 (388)
T ss_dssp TCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBT-TCCT----TCSSC
T ss_pred CCEEEEecchhcCCccCCeeccccc-ceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhC-CCCc----cCccc
Confidence 9999999999987653 2333333 56666655 7665544799998876 4 3444322111 1100 00000
Q ss_pred CCCCCCCCCCC---CCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 311 ADPPSRFEAGT---PAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 311 ~~~~~~~~~gt---~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.....|+ .+....+++..++++ ++...++.+++.+++.+.|.+++|+
T Consensus 227 ----~~~~~g~~~~~~~~~~a~~~~~~~~-----l~~~~~~~~~~~~~l~~~L~~~~~~ 276 (388)
T 1b9h_A 227 ----FHKIAGSNMRLNEFSASVLRAQLAR-----LDEQIAVRDERWTLLSRLLGAIDGV 276 (388)
T ss_dssp ----CCCSCCCBCBCBHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred ----eeecccccCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCc
Confidence 0112233 344444333333332 4556777788899999999887664
No 163
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.91 E-value=2e-23 Score=199.36 Aligned_cols=162 Identities=20% Similarity=0.282 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+..+++++++++++|.+ ..++++++++|+..++.++ +++||+|++.++.|++....+...++..|+++++++
T Consensus 81 ~p~~~~le~~lA~l~g~~---~~v~~~sG~~Ai~~al~al----~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~ 153 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTGAL---GVLALGSGMAAISTAILTL----ARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD 153 (430)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHH----CCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHH----hCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 456778999999999986 4566677789999999998 899999999999999988777767788899999999
Q ss_pred CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 190 LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 190 ~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
.+ |+++|++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+.. .+....+.|+++.|++
T Consensus 154 ~~-----d~~~l~~ai~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~div~~S~s 227 (430)
T 3ri6_A 154 VM-----DSLAVEHACDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDIEVLSST 227 (430)
T ss_dssp TT-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSEEEEECC
T ss_pred CC-----CHHHHHHhhCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEEEEECCc
Confidence 87 89999999999999999999999999999999999999999999999999998765 3444568999999999
Q ss_pred CcCCCCc---ceEEEEcc
Q 017640 270 KMCGPTG---IGFLFGKS 284 (368)
Q Consensus 270 K~~g~~G---~G~l~~~~ 284 (368)
|++|++| .|+++.+.
T Consensus 228 K~l~g~g~~~gG~vv~~~ 245 (430)
T 3ri6_A 228 KFISGGGTSVGGVLIDHG 245 (430)
T ss_dssp CEEETTEEECCEEEEECS
T ss_pred ccccCCCCceEEEEEECC
Confidence 9888765 56666433
No 164
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.91 E-value=1e-23 Score=199.40 Aligned_cols=264 Identities=13% Similarity=0.043 Sum_probs=184.0
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCC-----CCCcEEE
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINAS-----DSGEIVF 134 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~-----~~~~v~~ 134 (368)
++++.|..+. ..++++.+.+++.+.+... ..+ .+. ......++|++++++++.. ++++|++
T Consensus 26 ~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~--~~~--~y~----~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~ 97 (396)
T 2q7w_A 26 PGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENE--TTK--NYL----GIDGIPEFGRCTQELLFGKGSALINDKRART 97 (396)
T ss_dssp --CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHC--CCC--CCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEE
T ss_pred CCceecccccccCCCCCccCcHHHHHHHHhhcCcc--ccc--CCC----CCCCCHHHHHHHHHHHhcCCCCccccccEEE
Confidence 4556776665 2256789999998876542 111 110 1122347899999988321 1348888
Q ss_pred --eCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhccc---
Q 017640 135 --TKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLSR--- 207 (368)
Q Consensus 135 --t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~--- 207 (368)
|+|+++|+.+++.++. .+.+||+|++.+|+|++.. ..++..|++++.++.+ +++.+|+++|++++++
T Consensus 98 ~~~~g~~~a~~~~~~~~~--~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 171 (396)
T 2q7w_A 98 AQTPGGTGALRVAADFLA--KNTSVKRVWVSNPSWPNHK----SVFNSAGLEVREYAYYDAENHTLDFDALINSLNEAQA 171 (396)
T ss_dssp EEESHHHHHHHHHHHHHH--HHSCCCEEEEEESCCTHHH----HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTCCT
T ss_pred EecccchhhHHHHHHHHH--HhCCCCEEEEcCCCchhHH----HHHHHcCCceEEEecccCCCCCcCHHHHHHHHHhCCC
Confidence 9999999999987652 1368999999999998844 4456679999999985 5678899999999975
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc-------ccc-CCC-CCccEEEecCcCcCCCC
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM-------VVD-VQG-LDADFLVASSHKMCGPT 275 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~-------~~~-~~~-~~~d~~~~s~~K~~g~~ 275 (368)
+++++++++++||||.++| +++|.++|++||+++|+|++|+.... ++. +.. .+.+++++|+||.+|++
T Consensus 172 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 251 (396)
T 2q7w_A 172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLY 251 (396)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccc
Confidence 4688899999999999998 56899999999999999999884321 121 211 23568899999999988
Q ss_pred c--ceEEEE---ccc----ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----HhC
Q 017640 276 G--IGFLFG---KSD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-----TIG 341 (368)
Q Consensus 276 G--~G~l~~---~~~----li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-----~~g 341 (368)
| +|++++ +++ +++.+.... +...++++.....++..+++... ...
T Consensus 252 G~riG~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~ 310 (396)
T 2q7w_A 252 NERVGACTLVAADSETVDRAFSQMKAAI---------------------RANYSNPPAHGASVVATILSNDALRAIWEQE 310 (396)
T ss_dssp GGCCEEEEEECSSHHHHHHHHHHHHHHH---------------------HTTTSSCCHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred ccccceEEEEcCCHHHHHHHHHHHHHHH---------------------hhccCCCCcHHHHHHHHHhcChhhHHHHHHH
Confidence 8 799987 453 333322111 11122457777777766665330 124
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 017640 342 MQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
++.++++.+++.+++.+.|.+..
T Consensus 311 ~~~~~~~~~~~~~~l~~~L~~~~ 333 (396)
T 2q7w_A 311 LTDMRQRIQRMRQLFVNTLQEKG 333 (396)
T ss_dssp HHHC-CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Confidence 66777888888899988888763
No 165
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.91 E-value=7e-23 Score=195.77 Aligned_cols=256 Identities=16% Similarity=0.107 Sum_probs=180.7
Q ss_pred eccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHc
Q 017640 71 LDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 71 l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~ 149 (368)
|..+.+. +.|+.+.+++.+.+... .++. ..+...++|+.+++++|.+ ++++|+|+++|+..++.++
T Consensus 21 l~~~~p~~~~p~~~~~a~~~~~~~~-~y~~---------~~~~~~~l~~~la~~~~~~---~v~~~~ggt~al~~~l~~l 87 (424)
T 2po3_A 21 LLVGRPNRIDRARLYERLDRALDSQ-WLSN---------GGPLVREFEERVAGLAGVR---HAVATCNATAGLQLLAHAA 87 (424)
T ss_dssp EETTCCCCCCHHHHHHHHHHHHHHT-CCSS---------SCHHHHHHHHHHHHHHTSS---EEEEESCHHHHHHHHHHHH
T ss_pred ccccCCCCCChHHHHHHHHHHHhcC-Cccc---------CCHHHHHHHHHHHHHhCCC---eEEEeCCHHHHHHHHHHHc
Confidence 4444444 34778899988887642 1110 0245668999999999974 8999999999999999987
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEcccccccccccCHH
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIE 228 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~ 228 (368)
. +||+|++++++|++... .++..|++++.+++++ ++.+|+++|++++++++++|++++ |||...+++
T Consensus 88 ----~-~gd~Vlv~~~~~~~~~~----~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~tG~~~~l~ 155 (424)
T 2po3_A 88 ----G-LTGEVIMPSMTFAATPH----ALRWIGLTPVFADIDPDTGNLDPDQVAAAVTPRTSAVVGVH---LWGRPCAAD 155 (424)
T ss_dssp ----T-CCSEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTSSBCHHHHGGGCCTTEEEEEEEC---GGGCCCCHH
T ss_pred ----C-CCCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCcCCcCHHHHHHhhCcCCcEEEEEC---CCCCcCCHH
Confidence 2 68999999999998654 3456799999999986 678999999999988899998864 799999999
Q ss_pred HHHHHHHhcCCEEEEecCCcCCcccccCCCC--CccEEEecCc--CcCCCCcceEEEEc-ccccccCCCcccCCcceeec
Q 017640 229 EIVHWSHDVGAKVLVDACQSVPHMVVDVQGL--DADFLVASSH--KMCGPTGIGFLFGK-SDLLSAMPPFLGGGEMISDV 303 (368)
Q Consensus 229 ~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~--~~d~~~~s~~--K~~g~~G~G~l~~~-~~li~~l~~~~~g~~~~~~~ 303 (368)
+|.++|++||+++|+|++|+.|.. .+.... ..|++++|+| |.+++..+|+++.+ +++++.+++....+....
T Consensus 156 ~i~~la~~~~~~li~Dea~~~g~~-~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~v~~~~~l~~~l~~~~~~~~~~~-- 232 (424)
T 2po3_A 156 QLRKVADEHGLRLYFDAAHALGCA-VDGRPAGSLGDAEVFSFHATKAVNAFEGGAVVTDDADLAARIRALHNFGFDLP-- 232 (424)
T ss_dssp HHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHHBTTTTCT--
T ss_pred HHHHHHHHcCCEEEEECccccCCe-ECCeecccccCEEEEeCCCCCCccCCCCeEEEeCCHHHHHHHHHHHhcCcccc--
Confidence 999999999999999999997654 221111 2579999998 67776448999998 677776654433211100
Q ss_pred ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 304 FLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
+.. .. .|.......+++..++..+. +++.+.++..++.+++.+.|.+++|+
T Consensus 233 ------~~~--~~--~g~~~~~~~~~aa~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~ 283 (424)
T 2po3_A 233 ------GGS--PA--GGTNAKMSEAAAAMGLTSLD--AFPEVIDRNRRNHAAYREHLADLPGV 283 (424)
T ss_dssp ------TCC--TT--CCCBCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTCSCTTE
T ss_pred ------ccc--cc--cCcCCCcCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhccCCCc
Confidence 000 00 11110001122222333222 35677888889999999988776553
No 166
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=1.2e-23 Score=200.05 Aligned_cols=173 Identities=21% Similarity=0.211 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHcCCCCCCcEEE--eCCHHHHHHHHHHHccCCCCCCCCEEEEcC-CCCcccHHHH-------HHHHHHcC
Q 017640 113 YELARKKVAAFINASDSGEIVF--TKNATEAINLVAYSWGLSNLKSGDEVILTV-AEHHSAIVPW-------QLVAQKTG 182 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~--t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~-------~~~~~~~g 182 (368)
.+++++.+++++|.+. .+++ ++|+++|+..++.++ +++||+|++.+ +.|.+....+ ...++..|
T Consensus 76 ~~~Le~~lA~l~g~e~--alv~p~~~sGt~A~~~al~al----l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G 149 (427)
T 3hvy_A 76 RDSLDRVYANIFNTES--AFVRPHFVNGTHAIGAALFGN----LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYG 149 (427)
T ss_dssp HHHHHHHHHHHHTCSE--EEEETTCCSHHHHHHHHHHHT----CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGT
T ss_pred HHHHHHHHHHHhCCCc--eEEeCCCCcHHHHHHHHHHHh----cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcC
Confidence 6789999999999873 3443 788899999999998 89999999998 8888765333 13345679
Q ss_pred CEEEEEeCCCCCCCCHHHHHHhcc--cCceEEEEcc----cccccccccCHHHHHHHHHh--cCCEEEEecCCcCCcccc
Q 017640 183 ANLKFLNLNDDESPDLDKLKEMLS--RKTKLVVIHH----ISNMLASILPIEEIVHWSHD--VGAKVLVDACQSVPHMVV 254 (368)
Q Consensus 183 ~~v~~v~~~~~~~~d~~~l~~~l~--~~~~~v~~~~----~~n~tG~~~~l~~i~~l~~~--~g~~li~D~a~~~~~~~~ 254 (368)
++++.++. +++.+|+++|+++++ +++++|++++ ++||||.+.++++|.++|++ ||+++++|++|+.+....
T Consensus 150 ~~~~~v~~-~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~ 228 (427)
T 3hvy_A 150 VKYKMVDL-KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEK 228 (427)
T ss_dssp CEEEECCC-BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSS
T ss_pred CEEEEecC-CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCC
Confidence 99999998 778899999999998 7899999999 99999999999999999999 899999999999776322
Q ss_pred cCCCCCccEEEecCcCcCCCCc---ceEEEEcccccccCCC
Q 017640 255 DVQGLDADFLVASSHKMCGPTG---IGFLFGKSDLLSAMPP 292 (368)
Q Consensus 255 ~~~~~~~d~~~~s~~K~~g~~G---~G~l~~~~~li~~l~~ 292 (368)
+....+.|++++|+||.+|+.| .|++++++++++.++.
T Consensus 229 ~p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~ 269 (427)
T 3hvy_A 229 EPTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATF 269 (427)
T ss_dssp CGGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHH
T ss_pred CCcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHH
Confidence 3334578999999999887643 5999999999887764
No 167
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.91 E-value=5e-24 Score=203.00 Aligned_cols=255 Identities=14% Similarity=0.135 Sum_probs=173.3
Q ss_pred CCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNL 154 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~ 154 (368)
.+.++.+.+++.+.+.... .+++...+..........+.+++.+++++|.++. .|++++ +++++..++.++ +
T Consensus 40 n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-~v~~~s-Gs~a~~~a~~~~----~ 113 (420)
T 3gbx_A 40 NYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYA-NVQPHS-GSQANFAVYTAL----L 113 (420)
T ss_dssp CCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEE-ECCCSS-HHHHHHHHHHHH----C
T ss_pred CCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCc-eeEecC-cHHHHHHHHHHh----c
Confidence 3479999999988774422 2222111111111234455677899999999643 454555 588999999988 8
Q ss_pred CCCCEEEEcCCCCcccHHHHHH-HHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHH
Q 017640 155 KSGDEVILTVAEHHSAIVPWQL-VAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVH 232 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s~~~~~~~-~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~ 232 (368)
++||+|++.+++|.++...... .....+...+.++.+.++.+|+++|++++++ ++++|++++++|+ ...|+++|.+
T Consensus 114 ~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~ 191 (420)
T 3gbx_A 114 QPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMRE 191 (420)
T ss_dssp CTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHH
T ss_pred CCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHH
Confidence 9999999999999885422221 1112245666777777788999999999987 5899999888875 4788999999
Q ss_pred HHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcC-CCCcceEEEEcc---cccccCCCcccCCcceeec
Q 017640 233 WSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGKS---DLLSAMPPFLGGGEMISDV 303 (368)
Q Consensus 233 l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~---~li~~l~~~~~g~~~~~~~ 303 (368)
+|++||+++|+|++|+.+.. +.... .+|++++|+||.+ |+.| |+++.++ ++.+.+.+....+
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~~~~~~------ 262 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP--HAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNSAVFPS------ 262 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTT--TSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHHHHC--------
T ss_pred HHHHcCCEEEEECCcchhceecccCCcccc--cCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhhhcCCC------
Confidence 99999999999999875443 22222 4899999999987 5665 9999988 5555544332211
Q ss_pred ccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh
Q 017640 304 FLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 304 ~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
..++++...++++..++......+++.+.++..++.+++.+.|.+
T Consensus 263 --------------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (420)
T 3gbx_A 263 --------------AQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN 307 (420)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh
Confidence 134677777777777776554335678889999999999999987
No 168
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.91 E-value=4.2e-23 Score=197.18 Aligned_cols=161 Identities=16% Similarity=0.204 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEE-
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFL- 188 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v- 188 (368)
.+...++++.+++++|.+ ..++++++++|+..++.++ +++||+|+++.++|+++...+...++..|++++.+
T Consensus 57 ~~~~~~l~~~la~~~g~~---~~v~~~sGt~A~~~~l~~~----~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 129 (421)
T 2ctz_A 57 NPTVDVLEKRLAALEGGK---AALATASGHAAQFLALTTL----AQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTS 129 (421)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHHHH----CCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECC
T ss_pred ChHHHHHHHHHHHHhCCC---ceEEecCHHHHHHHHHHHH----hCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 356678999999999986 3355555699999999988 78999999999999998887766667789999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCC-cCCcccccCCCCCccEEEec
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQ-SVPHMVVDVQGLDADFLVAS 267 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~-~~~~~~~~~~~~~~d~~~~s 267 (368)
+.+ |+++|++++++++++|++++++||+|.+.|+++|.++|++||+++|+|++| +.+.. ......++|++++|
T Consensus 130 ~~~-----d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~-~~~~~~~~Di~~~s 203 (421)
T 2ctz_A 130 REE-----RPEEFLALTDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYL-LRPLAWGAALVTHS 203 (421)
T ss_dssp TTC-----CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTS-CCGGGGTCSEEEEE
T ss_pred CCC-----CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccccccc-CCccccCCeEEEEC
Confidence 765 899999999999999999999999999999999999999999999999999 87642 12224579999999
Q ss_pred CcCcCCCCc--ceEEEEc
Q 017640 268 SHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 268 ~~K~~g~~G--~G~l~~~ 283 (368)
+||++|++| +|++++.
T Consensus 204 ~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 204 LTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp TTTTTTCSSCCCCEEEEE
T ss_pred CcccccCCCCcEEEEEEe
Confidence 999887655 6766664
No 169
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.91 E-value=8.1e-24 Score=196.56 Aligned_cols=206 Identities=17% Similarity=0.196 Sum_probs=153.6
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
..+|+|+.+....+++.+.+++.+... . ... +.......++|+++++++|.+ ++++++|+++++.++
T Consensus 3 ~~~i~~~~~~~~~p~~~~~~a~~~~~~----~----~~~--y~~~~~~~~l~~~la~~~g~~---~~~~~~~gt~a~~~~ 69 (347)
T 1jg8_A 3 HMMIDLRSDTVTKPTEEMRKAMAQAEV----G----DDV--YGEDPTINELERLAAETFGKE---AALFVPSGTMGNQVS 69 (347)
T ss_dssp --CEECSCGGGCCCCHHHHHHHHTCCC----C----CGG--GTCCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHH
T ss_pred ceEEEeccccCCCCCHHHHHHHhcCCC----C----Ccc--cCCChHHHHHHHHHHHHhCCc---eEEEecCcHHHHHHH
Confidence 356899999888888888888754321 0 001 111234568999999999985 678888999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISN 219 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n 219 (368)
+.++ +++||+|++++|+|.+.+.. ...++..|++++.+ .++++.+|+++|++++++ ++++|++++++|
T Consensus 70 ~~~~----~~~gd~Vl~~~~~~~~~~~~-~~~~~~~g~~~~~v-~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 70 IMAH----TQRGDEVILEADSHIFWYEV-GAMAVLSGVMPHPV-PGKNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN 143 (347)
T ss_dssp HHHH----CCTTCEEEEETTCHHHHSST-THHHHHTCCEEEEE-CEETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred HHHh----cCCCCEEEEcCcchhhhccc-cchhhccCeEEEEe-cCCCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence 9888 78999999999988764321 12345679999988 556677899999999975 689999999999
Q ss_pred cc-ccccC---HHHHHHHHHhcCCEEEEecCCcCCcc---cccCCC--CCccEEEecCcCcCCCCcce-EEEEccccccc
Q 017640 220 ML-ASILP---IEEIVHWSHDVGAKVLVDACQSVPHM---VVDVQG--LDADFLVASSHKMCGPTGIG-FLFGKSDLLSA 289 (368)
Q Consensus 220 ~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~---~~~~~~--~~~d~~~~s~~K~~g~~G~G-~l~~~~~li~~ 289 (368)
|| |.++| +++|.++|++||+++++|++|..+.. ..+... .+.|.++.|+||.+|++ .| +++.++++++.
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~-~G~~~~~~~~~~~~ 222 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAP-VGSVVVGDRDFIER 222 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCS-SCEEEEECHHHHHH
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCC-ceEEEEcCHHHHHH
Confidence 99 99998 46888999999999999999854211 111111 25788888999988754 45 56677777766
Q ss_pred CC
Q 017640 290 MP 291 (368)
Q Consensus 290 l~ 291 (368)
+.
T Consensus 223 ~~ 224 (347)
T 1jg8_A 223 AR 224 (347)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 170
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.90 E-value=3.5e-22 Score=188.70 Aligned_cols=262 Identities=16% Similarity=0.193 Sum_probs=183.3
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCC---
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLS--- 152 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~--- 152 (368)
...+++.+.+++.+.+.... + . ..+...++++.+++++|.+ ++++++|+|+|+..++.++...
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~---~----~----~~~~~~~l~~~la~~~~~~---~~i~~~sGt~a~~~al~~~~~~~~~ 75 (390)
T 3b8x_A 10 SSTWDDLEYKAIQSVLDSKM---F----T----MGEYVKQYETQFAKTFGSK---YAVMVSSGSTANLLMIAALFFTKKP 75 (390)
T ss_dssp CCCCCHHHHHHHHHHHHHTC---C----S----SCHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHTTSSSSC
T ss_pred CCCCCHHHHHHHHHHHHcCC---C----C----CChHHHHHHHHHHHHHCCC---cEEEECCHHHHHHHHHHHHHhhhhc
Confidence 34678899999988886521 1 1 1345668999999999986 6788888899999999987210
Q ss_pred CCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC-CCCCHHHHHHhcccCceEEEEcccccccccccCHHHHH
Q 017640 153 NLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD-ESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIV 231 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~ 231 (368)
.+++||+|+++.++|+++...+ +..|++++.++++++ +.+|+++|++++++++++|++++ ++|...|+++|.
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~ 148 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYYPL----QQYGLRVKFVDIDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEIN 148 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHHHH----HHTTCEEEEECBCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHH
T ss_pred CCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEecCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHH
Confidence 1678999999999999976544 456999999999876 89999999999998999999874 578889999999
Q ss_pred HHHHhcCCEEEEecCCcCCcccccCCCCCc--cEEEecC--cC-cCCCCcceEEEEcc-cccccCCCcccCC--ccee--
Q 017640 232 HWSHDVGAKVLVDACQSVPHMVVDVQGLDA--DFLVASS--HK-MCGPTGIGFLFGKS-DLLSAMPPFLGGG--EMIS-- 301 (368)
Q Consensus 232 ~l~~~~g~~li~D~a~~~~~~~~~~~~~~~--d~~~~s~--~K-~~g~~G~G~l~~~~-~li~~l~~~~~g~--~~~~-- 301 (368)
++|++||+++|+|++|+.|... +....+. |+.++|+ +| +.++.| |++++++ ++.+.+++...++ ....
T Consensus 149 ~l~~~~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~ 226 (390)
T 3b8x_A 149 KIIGGRDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKK 226 (390)
T ss_dssp HHHTTSCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSE
T ss_pred HHHHHcCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCcccccc
Confidence 9999999999999999988764 4433333 5555442 34 444455 9999887 5655555433322 1100
Q ss_pred -ecc--cCCCCC----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 302 -DVF--LDHSTF----ADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 302 -~~~--~~~~~~----~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
... .....+ ......+..++.++...+++.. ++. ++.+.++.+++++++.+.|.+++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~~-----l~~~~~~~~~~~~~l~~~L~~~~~~ 292 (390)
T 3b8x_A 227 NKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-LKK-----LPRFISVRRKNAEYFLDKFKDHPYL 292 (390)
T ss_dssp ETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred ccccccccccccccccceeccccccCcCHHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 000 000000 0011123334666766665543 433 4567888999999999999887664
No 171
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.90 E-value=6.2e-23 Score=197.86 Aligned_cols=166 Identities=23% Similarity=0.260 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
...+++++++++++|.+ ++++++|+++|+..++. + +++||+|++.++.|++....+...++..|++++.++.
T Consensus 133 ~~~~~l~~~la~~~g~~---~~i~~~sGt~al~~~l~-~----~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 204 (464)
T 1ibj_A 133 PTRDALESLLAKLDKAD---RAFCFTSGMAALSAVTH-L----IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNT 204 (464)
T ss_dssp HHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHHHT-T----SCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECT
T ss_pred HHHHHHHHHHHHHhCCC---eEEEECCHHHHHHHHHH-H----hCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 46778999999999975 67777888899988774 4 7899999999999998776666666778999999997
Q ss_pred CCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc--cccCCCCCccEEEecC
Q 017640 191 NDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM--VVDVQGLDADFLVASS 268 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~--~~~~~~~~~d~~~~s~ 268 (368)
+ |+++|++++++++++|++++++||||.++|+++|.++|++||+++|+|++|+.|.. +++ ++.|+++.|+
T Consensus 205 ~-----d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~---~~~div~~S~ 276 (464)
T 1ibj_A 205 T-----KLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLE---LGADIVMHSA 276 (464)
T ss_dssp T-----SHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGG---TTCSEEEEET
T ss_pred C-----CHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhh---cCCEEEEECC
Confidence 5 89999999999999999999999999999999999999999999999999997754 332 5799999999
Q ss_pred cCcCC-CCc--ceEEEEcc-cccccCCC
Q 017640 269 HKMCG-PTG--IGFLFGKS-DLLSAMPP 292 (368)
Q Consensus 269 ~K~~g-~~G--~G~l~~~~-~li~~l~~ 292 (368)
||+++ +.| +|++++++ ++++.+.+
T Consensus 277 sK~~~g~~Gl~~G~l~~~~~~l~~~l~~ 304 (464)
T 1ibj_A 277 TKFIAGHSDVMAGVLAVKGEKLAKEVYF 304 (464)
T ss_dssp TTTTTCSSCCCCEEEEECSHHHHHHHHH
T ss_pred cccccCCCCCcEEEEEEChHHHHHHHHH
Confidence 99765 556 49999986 67666653
No 172
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.90 E-value=3.9e-23 Score=199.58 Aligned_cols=261 Identities=13% Similarity=0.083 Sum_probs=170.5
Q ss_pred CCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHH-HHHHHHHHHHHHHHcCCCCCC--cEEEeCCHHHHHHHHHHHc
Q 017640 75 ATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKA-TDEYELARKKVAAFINASDSG--EIVFTKNATEAINLVAYSW 149 (368)
Q Consensus 75 ~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~r~~la~~~~~~~~~--~v~~t~g~t~a~~~~~~~~ 149 (368)
+...+++.|++++...+...+ ++|.. .+..+... .++.+..++.+++++|++.++ ..++++|+|+|+..++.++
T Consensus 62 s~n~~~~~V~eA~~~~l~~~y~~G~~g~-r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al 140 (490)
T 2a7v_A 62 SENFCSRAALEALGSCLNNKYSEGYPGK-RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 140 (490)
T ss_dssp TCCCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHcCCCccCCCcc-cccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHH
Confidence 555689999999988776533 33432 22222222 234446779999999998642 2356678899999999998
Q ss_pred cCCCCCCCCEEEEcCCCCcccHHHHH----HHHHHcCCEE--EEEeCC-CCCCCCHHHHHHhccc-CceEEEEccccccc
Q 017640 150 GLSNLKSGDEVILTVAEHHSAIVPWQ----LVAQKTGANL--KFLNLN-DDESPDLDKLKEMLSR-KTKLVVIHHISNML 221 (368)
Q Consensus 150 ~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~~v--~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~t 221 (368)
+++||+|++.+++|.++..... ..+...|..+ +.++++ +++.+|+++|++++.+ ++++|+++.++||
T Consensus 141 ----~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~~~~~iD~d~le~~l~~~~~klIi~~~s~~~- 215 (490)
T 2a7v_A 141 ----LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA- 215 (490)
T ss_dssp ----CCSCEECCC-------------------------------CCBCTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC-
T ss_pred ----cCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEecccccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC-
Confidence 8999999999998876432111 0122335443 444444 4689999999999864 7899988887776
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcC-CCCcceEEEEcccccc-------
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLS------- 288 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~------- 288 (368)
...|+++|.++|++||+++++|++|+.|.. +..+ .+.|++++|+||.+ ||.| |+++++++++.
T Consensus 216 -~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~--~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~ 291 (490)
T 2a7v_A 216 -RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF--KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGR 291 (490)
T ss_dssp -SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGG--GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEE
T ss_pred -CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCC--CCCCEEEECCcccCccccc-hheeeccchhcccccccc
Confidence 467999999999999999999999975432 2222 25899999999966 5665 99999886431
Q ss_pred --------cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 289 --------AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 289 --------~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
.++... .....|+++...++++..++........+...++..++++++.+.|
T Consensus 292 ~~~~~l~~~i~~~~--------------------~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L 351 (490)
T 2a7v_A 292 EIPYTFEDRINFAV--------------------FPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADAL 351 (490)
T ss_dssp EEECCCHHHHHHHH--------------------TTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHh--------------------cccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 111111 1112467899999999888887764445778889999999999999
Q ss_pred HhhcCC
Q 017640 361 QERHNT 366 (368)
Q Consensus 361 ~~~~g~ 366 (368)
.+. |+
T Consensus 352 ~~~-G~ 356 (490)
T 2a7v_A 352 LER-GY 356 (490)
T ss_dssp HHT-TC
T ss_pred HHc-Cc
Confidence 875 54
No 173
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.83 E-value=1.4e-25 Score=212.21 Aligned_cols=259 Identities=14% Similarity=0.104 Sum_probs=186.1
Q ss_pred CeEEeccCCCC-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CCCCCcEEEeCCHH
Q 017640 67 KLVYLDNAATS-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI----N--ASDSGEIVFTKNAT 139 (368)
Q Consensus 67 ~~i~l~~~~~~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~~~~~v~~t~g~t 139 (368)
+++.|..+... ++++.+.+++.+.+... .+.+.. . ..++|+.+++++ | .++ ++|++|+|++
T Consensus 32 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-------~~~y~~--~--~~~l~~~la~~l~~~~g~~~~~-~~v~~~~g~~ 99 (392)
T 3b1d_A 32 QLLPAWIADMDFEVMPEVKQAIHDYAEQL-------VYGYTY--A--SDELLQAVLDWEKSEHQYSFDK-EDIVFVEGVV 99 (392)
Confidence 56777777765 56788889888877531 000111 1 345666666655 4 333 4899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-C--CCCCCHHHHHHhcc-cCceEEEEc
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-D--DESPDLDKLKEMLS-RKTKLVVIH 215 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~--~~~~d~~~l~~~l~-~~~~~v~~~ 215 (368)
+++.+++.++ .++||+|++.+|.|++... .++..|++++.++.+ + ++.+|++.|+++++ .++++|+++
T Consensus 100 ~a~~~~~~~~----~~~gd~vl~~~p~~~~~~~----~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~ 171 (392)
T 3b1d_A 100 PAISIAIQAF----TKEGEAVLINSPVYPPFAR----SVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLC 171 (392)
Confidence 9999999988 7899999999999988554 344568899999885 3 24589999999997 678999999
Q ss_pred ccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc------cc-cCCC--CCccEEEecCcCcCCCCc--ceEEE
Q 017640 216 HISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM------VV-DVQG--LDADFLVASSHKMCGPTG--IGFLF 281 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~------~~-~~~~--~~~d~~~~s~~K~~g~~G--~G~l~ 281 (368)
+++||||.++| +++|.++|++||+++|+|++|+.... ++ .+.. .+.++++.|++|.+|.+| +|+++
T Consensus 172 ~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 251 (392)
T 3b1d_A 172 NPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAI 251 (392)
Confidence 99999999998 88999999999999999999985321 11 1221 456789999999998667 89999
Q ss_pred Ecc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Q 017640 282 GKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVI 360 (368)
Q Consensus 282 ~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 360 (368)
+++ ++++.+......+ ..++++.....++..+++... ..++.++++..++.+++.+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~l 310 (392)
T 3b1d_A 252 IENPTLCAQFKHQQLVN--------------------NHHEVSSLGYIATETAYRYGK-PWLVALKAVLEENIQFAVEYF 310 (392)
Confidence 875 4777766443211 112445555566666665322 235677777888888888887
Q ss_pred Hh-hcCC
Q 017640 361 QE-RHNT 366 (368)
Q Consensus 361 ~~-~~g~ 366 (368)
.+ .+++
T Consensus 311 ~~~~~~~ 317 (392)
T 3b1d_A 311 AQEAPRL 317 (392)
Confidence 76 4554
No 174
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.90 E-value=1.9e-23 Score=205.19 Aligned_cols=210 Identities=16% Similarity=0.116 Sum_probs=154.0
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhh-ccCCCCcchhhHHHHHHHHHHHHHHHHHc----C--CC--CCCcEEEeCC
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN-SNVHRGIHFLSAKATDEYELARKKVAAFI----N--AS--DSGEIVFTKN 137 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~la~~~----~--~~--~~~~v~~t~g 137 (368)
.++.|+.+.++..++.+++++.+.+.... ..+.. +.. ++|+.+++++ + .. ++++|++|+|
T Consensus 104 ~~i~l~~g~~~~~~~~~v~a~~~~~~~~~y~~~~~-------g~~----~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G 172 (533)
T 3f6t_A 104 DAVNYCHTELGLNRDKVVAEWVNGAVANNYPVPDR-------CLV----NTEKIINYFLQELSYKDANLAEQTDLFPTEG 172 (533)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHHHTCSCCSSSS-------CCH----HHHHHHHHHHHHHHTTTCCCGGGEEEEEEEH
T ss_pred hheeccCCCCCcCCcHHHHHHHHHHHhCCCCCCcc-------cHH----HHHHHHHHHHHHhcCCCCCCCCcceEEEECC
Confidence 46778877777667777777766665311 11111 112 4555555554 2 22 2248999999
Q ss_pred HHHHHHHHHHHcc-CCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC----CCCCCCHHHHHHhcccCceEE
Q 017640 138 ATEAINLVAYSWG-LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN----DDESPDLDKLKEMLSRKTKLV 212 (368)
Q Consensus 138 ~t~a~~~~~~~~~-~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~----~~~~~d~~~l~~~l~~~~~~v 212 (368)
+++++..++.++. ...+++||+|++.+|+|++. ...++..|.+++.++++ .++.+|+++|++++++++++|
T Consensus 173 ~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~----~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v 248 (533)
T 3f6t_A 173 GTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPY----LRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKAL 248 (533)
T ss_dssp HHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHH----HTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEE
T ss_pred HHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHH----HHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEE
Confidence 9999999999710 00178999999999998874 34445668999999985 347889999999999999999
Q ss_pred EEcccccccccccCHH---HHHHHHH-hcCCEEEEecCCcCCcc---cccCCCCCccEEEecCcCcCCCCc--ceEEEEc
Q 017640 213 VIHHISNMLASILPIE---EIVHWSH-DVGAKVLVDACQSVPHM---VVDVQGLDADFLVASSHKMCGPTG--IGFLFGK 283 (368)
Q Consensus 213 ~~~~~~n~tG~~~~l~---~i~~l~~-~~g~~li~D~a~~~~~~---~~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~ 283 (368)
++++++||||.++|.+ +|+++|+ +||+++|+|++|+.... ++.....+.+++++|+||.+|++| +|+++++
T Consensus 249 ~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~ 328 (533)
T 3f6t_A 249 IVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALN 328 (533)
T ss_dssp EEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEE
T ss_pred EEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCcccceEEEEEC
Confidence 9999999999999955 8888888 68999999999983211 110111246799999999999888 9999999
Q ss_pred cc-----ccccCC
Q 017640 284 SD-----LLSAMP 291 (368)
Q Consensus 284 ~~-----li~~l~ 291 (368)
++ +++.+.
T Consensus 329 ~~~~~~~li~~l~ 341 (533)
T 3f6t_A 329 EKNVFDDNIAHLD 341 (533)
T ss_dssp SSCHHHHHHHTSC
T ss_pred cHHHHHHHHHhcc
Confidence 88 666554
No 175
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.90 E-value=5.7e-22 Score=187.66 Aligned_cols=246 Identities=15% Similarity=0.114 Sum_probs=176.2
Q ss_pred EEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 69 VYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 69 i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.|+|... .++.++.+.+++.+.+..+.. ... .+ ..+...++++.+++++|. +++++|+|+++|+
T Consensus 41 ~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~-~~~-~~-----~~~~~~~l~~~la~~~g~---~~v~~~~gg~~a~ 110 (397)
T 2ord_A 41 AYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIH-CSN-LF-----WNRPQMELAELLSKNTFG---GKVFFANTGTEAN 110 (397)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSC-CCT-TS-----EEHHHHHHHHHHHHTTTS---CEEEEESSHHHHH
T ss_pred EEEECCccccccccCCCCHHHHHHHHHHHHhccc-Ccc-cc-----CCHHHHHHHHHHHHhcCC---CeEEEeCCHHHHH
Confidence 4566532 345689999999998876421 111 11 135567899999999984 3899999999999
Q ss_pred HHHHHHccCCCCC------C-CCEEEEcCCCCcccHHHHHHHHHHcCCE------------EEEEeCCCCCCCCHHHHHH
Q 017640 143 NLVAYSWGLSNLK------S-GDEVILTVAEHHSAIVPWQLVAQKTGAN------------LKFLNLNDDESPDLDKLKE 203 (368)
Q Consensus 143 ~~~~~~~~~~~~~------~-gd~vl~~~~~~~s~~~~~~~~~~~~g~~------------v~~v~~~~~~~~d~~~l~~ 203 (368)
..++.++ .. + ++.|++.++.|++..... ++..|.+ ++.++.+ |+++|++
T Consensus 111 ~~al~~~----~~~~~~~~~~~~~vi~~~~~yh~~~~~~---~~~~g~~~~~~~~~p~~~~~~~~~~~-----d~~~l~~ 178 (397)
T 2ord_A 111 EAAIKIA----RKYGKKKSEKKYRILSAHNSFHGRTLGS---LTATGQPKYQKPFEPLVPGFEYFEFN-----NVEDLRR 178 (397)
T ss_dssp HHHHHHH----HHHHHHHCTTCCEEEEEBTCCCCSSHHH---HHHSBCHHHHGGGCSCCTTEEEECTT-----CHHHHHH
T ss_pred HHHHHHH----HHHhhcCCCCCceEEEEcCCcCCCchhh---hhccCChhhccccCCCCCCeeEecCC-----CHHHHHH
Confidence 9999886 32 3 578999999887754322 2334544 7777764 8999999
Q ss_pred hcccCceEEEEccccccccc-ccC---HHHHHHHHHhcCCEEEEecCCc-CCcc--cccCCC--CCccEEEecCcCcCCC
Q 017640 204 MLSRKTKLVVIHHISNMLAS-ILP---IEEIVHWSHDVGAKVLVDACQS-VPHM--VVDVQG--LDADFLVASSHKMCGP 274 (368)
Q Consensus 204 ~l~~~~~~v~~~~~~n~tG~-~~~---l~~i~~l~~~~g~~li~D~a~~-~~~~--~~~~~~--~~~d~~~~s~~K~~g~ 274 (368)
++++++++|++++++||||. +++ +++|.++|++||+++|+|++|+ ++.. ++.... ..+|++ |++|.+++
T Consensus 179 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~ 256 (397)
T 2ord_A 179 KMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVL--TTAKGLGG 256 (397)
T ss_dssp HCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT
T ss_pred HhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCee--eeccccCC
Confidence 99989999999999999999 555 8899999999999999999997 2211 111111 236766 56798873
Q ss_pred -CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 275 -TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 275 -~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
.++|+++++++++ .+++...+ ...+.+....+++..+++.+.+ +.+.++.+++.
T Consensus 257 G~r~G~~~~~~~~~-~l~~~~~~---------------------~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~ 311 (397)
T 2ord_A 257 GVPIGAVIVNERAN-VLEPGDHG---------------------TTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKG 311 (397)
T ss_dssp TSCCEEEEECSTTC-CCCTTSSC---------------------CSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHH
T ss_pred CcCeEEEEEchHhc-ccCCCCcC---------------------CCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHH
Confidence 2399999999876 55432111 1125677777778888887654 45678888888
Q ss_pred HHHHHHHHhh
Q 017640 354 ICSIIVIQER 363 (368)
Q Consensus 354 ~~l~~~l~~~ 363 (368)
+++.+.|++.
T Consensus 312 ~~l~~~L~~~ 321 (397)
T 2ord_A 312 NYLMKKLQEM 321 (397)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888765
No 176
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.90 E-value=5.9e-24 Score=203.13 Aligned_cols=259 Identities=11% Similarity=0.118 Sum_probs=175.7
Q ss_pred CeEEeccCCCC----CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 67 KLVYLDNAATS----QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 67 ~~i~l~~~~~~----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
+++.|..+.+. +.++.+.+++.+.+... .. ....++.......++|++++++++.+++ +|++|+|+++++
T Consensus 33 ~~i~l~~g~~~~~~~~~~~~~~~a~~~~~~~~--~~---~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~i~~t~G~~~al 106 (422)
T 3d6k_A 33 LSLDLTRGKPSAEQLDLSNDLLSLPGGDFRTK--DG---VDCRNYGGLLGIADIRELWAEALGLPAD-LVVAQDGSSLNI 106 (422)
T ss_dssp CCEECCCCSCCHHHHHTTGGGGGCSTTCCBCT--TC---CBTTSSCCSSCCHHHHHHHHHHHTCCGG-GEEECSSCHHHH
T ss_pred CeEeCCCCCCChhhCCCcHHHHHHHHHHHhhc--cc---hhhhCCCCCCCCHHHHHHHHHHhCCChh-HEEEecchHHHH
Confidence 36788888774 44556666654331000 00 0000111122244899999999998765 999999999997
Q ss_pred --HHHHHHccCCCCCC------------CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-
Q 017640 143 --NLVAYSWGLSNLKS------------GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR- 207 (368)
Q Consensus 143 --~~~~~~~~~~~~~~------------gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~- 207 (368)
.+++.++ ..+ +|+|++.+|+|++.. ..++..|++++.+++++++ +|+++|++++++
T Consensus 107 ~l~~~~~~l----~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~ 177 (422)
T 3d6k_A 107 MFDLISWSY----TWGNNDSSRPWSAEEKVKWLCPVPGYDRHF----TITEHFGFEMINVPMTDEG-PDMGVVRELVKDP 177 (422)
T ss_dssp HHHHHHHHH----HHCCTTCSSCGGGSSCCEEEEEESCCHHHH----HHHHHHTCEEEEEEEETTE-ECHHHHHHHHTST
T ss_pred HHHHHHHHh----cCcccccccccccCCCCEEEEeCCccHHHH----HHHHHcCCEEEecCCCCCC-CCHHHHHHHHhcC
Confidence 6777776 333 457999999888754 4455669999999997766 899999999976
Q ss_pred CceEEE-EcccccccccccCHH---HHHHHHH-hcCCEEEEecCCcCCcc--------cc-c----CCCCCccEEEecCc
Q 017640 208 KTKLVV-IHHISNMLASILPIE---EIVHWSH-DVGAKVLVDACQSVPHM--------VV-D----VQGLDADFLVASSH 269 (368)
Q Consensus 208 ~~~~v~-~~~~~n~tG~~~~l~---~i~~l~~-~~g~~li~D~a~~~~~~--------~~-~----~~~~~~d~~~~s~~ 269 (368)
++++|+ +++++||||.++|.+ +|.++|+ +||+++|+|++|+.... ++ + .+..+.+++++|+|
T Consensus 178 ~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 257 (422)
T 3d6k_A 178 QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTS 257 (422)
T ss_dssp TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEEST
T ss_pred CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChh
Confidence 788887 799999999999965 7888888 89999999999973111 11 1 12346789999999
Q ss_pred CcCCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--HhCHHHH
Q 017640 270 KMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS--TIGMQKI 345 (368)
Q Consensus 270 K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~--~~g~~~i 345 (368)
|. +.+| +||+++++++++.+...... ...+.+.....++..+++... ..-++.+
T Consensus 258 K~-~~~GlriG~~~~~~~l~~~l~~~~~~---------------------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 315 (422)
T 3d6k_A 258 KI-THAGSGVSFFASSKENIEWYASHANV---------------------RGIGPNKLNQLAHAQFFGDVAGLKAHMLKH 315 (422)
T ss_dssp TT-SCTTSSCEEEECCHHHHHHHHHHHHH---------------------HCSCCCHHHHHHHHHHHCSHHHHHHHHHHH
T ss_pred hh-cCcccceEEEEeCHHHHHHHHHHHHh---------------------hcCCCCHHHHHHHHHHHhCcchHHHHHHHH
Confidence 98 4446 99999999888776643211 112456666666666664311 0124555
Q ss_pred HHHHHHHHHHHHHHHHh
Q 017640 346 HAYEVKWIICSIIVIQE 362 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~ 362 (368)
+++.++..+++.+.|.+
T Consensus 316 ~~~~~~~~~~l~~~L~~ 332 (422)
T 3d6k_A 316 AASLAPKFERVLEILDS 332 (422)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66666666666666654
No 177
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.90 E-value=2.2e-24 Score=204.15 Aligned_cols=270 Identities=11% Similarity=0.013 Sum_probs=175.5
Q ss_pred CCCCcccccccCCCCeEEeccCCCCC-CcHHHHHHHHHHHHHhhccCCCCcchhhHHH-HHHHHHHHHHHHHHcCC----
Q 017640 53 PDFPILHQEVYGSKKLVYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSAKA-TDEYELARKKVAAFINA---- 126 (368)
Q Consensus 53 ~~f~~~~~~~~~~~~~i~l~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~r~~la~~~~~---- 126 (368)
+.||...... ++++++|+.+.... .++.+.+++.+... .........|....+. .+...++|++++++++.
T Consensus 11 ~~~~~~~~~~--~~~~i~l~~g~p~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~~~g~~ 87 (391)
T 3bwn_A 11 EKISNKNIPM--SDFVVNLDHGDPTAYEEYWRKMGDRCTVT-IRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHGVVGNA 87 (391)
T ss_dssp -------CCT--TTSCEECSSCCCGGGHHHHHHTGGGSCEE-ECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHHHHCSB
T ss_pred cccCCCCccC--CCCeeEcCCCCCCCCCCHHHHHhHHHHhh-cCccchhhcCCCCCCcccccCHHHHHHHHHHHHhcCCC
Confidence 3455443222 36789999988763 34344444322110 0000001111111111 01114788888888873
Q ss_pred -CCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC----EEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHH
Q 017640 127 -SDSGEIVFTKNATEAINLVAYSWGLSNLKSGD----EVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKL 201 (368)
Q Consensus 127 -~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd----~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l 201 (368)
.++++|++|+|+++++.+++.++ +++|| +|++.+|+|++ +...++..|++++.++++.++.
T Consensus 88 ~~~~~~i~~t~G~~~al~~~~~~l----~~~Gd~~~~~Vlv~~P~y~~----~~~~~~~~g~~~~~~~~d~~~l------ 153 (391)
T 3bwn_A 88 ATEDRYIVVGTGSTQLCQAAVHAL----SSLARSQPVSVVAAAPFYST----YVEETTYVRSGMYKWEGDAWGF------ 153 (391)
T ss_dssp CCSSSEEEEEEHHHHHHHHHHHHH----HHTSSSSSEEEEECSSCCTH----HHHHHHTTCBTTEEEEEESTTC------
T ss_pred CCCCCeEEEeCChHHHHHHHHHHh----cCCCCCCcceEEEcCCCchh----HHHHHHHcCCeEEEecCCHHHc------
Confidence 23348999999999999999998 78999 99999999887 4455566799988888764322
Q ss_pred HHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-cccCCCCCccEEEecCcCcCCCCc--ce
Q 017640 202 KEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-VVDVQGLDADFLVASSHKMCGPTG--IG 278 (368)
Q Consensus 202 ~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-~~~~~~~~~d~~~~s~~K~~g~~G--~G 278 (368)
+ .+++++|++++++||||.+++ +|++.++.+++++|+|++|..+.. ++.. ..+.+++++|+||.||++| +|
T Consensus 154 ~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~~l~~-~~~~~i~~~S~SK~~g~~GlRiG 227 (391)
T 3bwn_A 154 D---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYTPITR-RQDHDIMLFTFSKITGHAGSRIG 227 (391)
T ss_dssp C---CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTSCCCC-CBCCSEEEEEHHHHHSCGGGCEE
T ss_pred C---CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCCcccc-CCCCeEEEEechhhcCCCccceE
Confidence 1 257899999999999999997 554422223499999999985432 2322 3468899999999999999 69
Q ss_pred EEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---------HhCHHHHHHH
Q 017640 279 FLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS---------TIGMQKIHAY 348 (368)
Q Consensus 279 ~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~---------~~g~~~i~~~ 348 (368)
|+++ ++++++.+...... ...+.+...+.++..+++... +..++.++++
T Consensus 228 ~~~~~~~~l~~~l~~~~~~---------------------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 286 (391)
T 3bwn_A 228 WALVKDKEVAKKMVEYIIV---------------------NSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREM 286 (391)
T ss_dssp EEEECCHHHHHHHHHHHHH---------------------HHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHH
T ss_pred EEEecCHHHHHHHHHHhcc---------------------cccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHH
Confidence 9998 77887766543310 012566777777777776543 2236788899
Q ss_pred HHHHHHHHHHHHHhhcCC
Q 017640 349 EVKWIICSIIVIQERHNT 366 (368)
Q Consensus 349 ~~~l~~~l~~~l~~~~g~ 366 (368)
.++..+++.+.|.+++++
T Consensus 287 ~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 287 MKNRWEKLREVVKESDAF 304 (391)
T ss_dssp HHHHHHHHHHHHHTCSSE
T ss_pred HHHHHHHHHHHHHhCCCc
Confidence 999999999999886543
No 178
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.90 E-value=4.9e-22 Score=190.17 Aligned_cols=268 Identities=8% Similarity=-0.004 Sum_probs=182.7
Q ss_pred CeEEeccCCC------CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAAT------SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|.... ++.++.+.+++.+.+.....++.. .+. .+...++++.++++++.+.+ +|+||+|+++
T Consensus 42 g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~~-~~~-----~~~~~~l~~~la~~~~~~~~-~v~~~~ggte 114 (429)
T 1s0a_A 42 GRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFG-GIT-----HAPAIELCRKLVAMTPQPLE-CVFLADSGSV 114 (429)
T ss_dssp SCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCCCS-SEE-----CHHHHHHHHHHHHHSCTTCC-EEEEESSHHH
T ss_pred CCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccc-ccC-----CHHHHHHHHHHHHhCCCCCC-EEEEeCCHHH
Confidence 4467876432 346899999999998764322111 111 23345788899999987654 9999999999
Q ss_pred HHHHHHHHccCCCC----CCCCEEEEcCCCCcccHHHHHHHHH-------Hc---CCEEEEEeCCC-----C-CCCCHHH
Q 017640 141 AINLVAYSWGLSNL----KSGDEVILTVAEHHSAIVPWQLVAQ-------KT---GANLKFLNLND-----D-ESPDLDK 200 (368)
Q Consensus 141 a~~~~~~~~~~~~~----~~gd~vl~~~~~~~s~~~~~~~~~~-------~~---g~~v~~v~~~~-----~-~~~d~~~ 200 (368)
|+..++.++.. .. ++|++|++.+|.|++.......... .. ...++.++.+. + +.+|+++
T Consensus 115 a~~~ai~~~~~-~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 193 (429)
T 1s0a_A 115 AVEVAMKMALQ-YWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVG 193 (429)
T ss_dssp HHHHHHHHHHH-HHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHH
T ss_pred HHHHHHHHHHH-HhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHHH
Confidence 99999986510 01 2589999999998875432222110 00 11344555432 2 3579999
Q ss_pred HHHhcc---cCceEEEEccc-ccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEec
Q 017640 201 LKEMLS---RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVAS 267 (368)
Q Consensus 201 l~~~l~---~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s 267 (368)
|+++++ +++++|+++.+ +||||.+.| +++|.++|++||+++|+|++|+ ++.. .++.....+|+++
T Consensus 194 l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t-- 271 (429)
T 1s0a_A 194 FARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILC-- 271 (429)
T ss_dssp HHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--
T ss_pred HHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEE--
Confidence 999987 46778888777 899998877 9999999999999999999997 5432 1222234577764
Q ss_pred CcCcCCC--CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 268 SHKMCGP--TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 268 ~~K~~g~--~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
++|.+++ .++|++++++++++.+.+...++. .+....+.|..+++++.++++.+.+ +.+
T Consensus 272 ~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~----------------~~~~t~~~n~~~~~a~~aal~~~~~---~~~ 332 (429)
T 1s0a_A 272 LGKALTGGTMTLSATLTTREVAETISNGEAGCF----------------MHGPTFMGNPLACAAANASLAILES---GDW 332 (429)
T ss_dssp ECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSC----------------SCCCTTTTCHHHHHHHHHHHHHHHT---CHH
T ss_pred ecccccCCCccceEEEeCHHHHHHhhcCCCccc----------------ccCCCCCCCHHHHHHHHHHHHHHHh---CCH
Confidence 5696664 468999999988776543210000 0011224688888888899988776 246
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 017640 346 HAYEVKWIICSIIVIQER 363 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~~ 363 (368)
.++..++.+++.+.|.++
T Consensus 333 ~~~~~~~~~~l~~~L~~l 350 (429)
T 1s0a_A 333 QQQVADIEVQLREQLAPA 350 (429)
T ss_dssp HHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 788888899999988775
No 179
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.90 E-value=6.1e-22 Score=186.34 Aligned_cols=250 Identities=16% Similarity=0.116 Sum_probs=174.2
Q ss_pred CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHH-HHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 78 QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKV-AAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 78 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-a~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
+.++.+.+++.+.+....-.+ . ....+++++++ ++++|. . .++++++|+|+|+..++.++ .+++
T Consensus 13 ~~~~~i~~a~~~~~~~~~~~~------~----~~~~~~l~~~~~a~~~g~-~-~~~v~~~sgt~al~~al~~l---~~~~ 77 (377)
T 3ju7_A 13 VPVIEYLDELKEIDASHIYTN------Y----GPINQRFEQTIMSGFFQN-R-GAVTTVANATLGLMAAIQLK---KRKK 77 (377)
T ss_dssp CCGGGGHHHHHHHHHHTCCSS------S----CHHHHHHHHHHHHHTSTT-C-SEEEEESCHHHHHHHHHHHH---SCTT
T ss_pred CCcHHHHHHHHHHHHcCCccc------C----CHHHHHHHHHHHHHHhCC-C-CeEEEeCCHHHHHHHHHHHc---CCCC
Confidence 456778888888876521111 0 13356899999 999993 2 37899999999999999987 4789
Q ss_pred CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhc-ccC--ceEEEEcccccccccccCHHHHHH
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN-DDESPDLDKLKEML-SRK--TKLVVIHHISNMLASILPIEEIVH 232 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l-~~~--~~~v~~~~~~n~tG~~~~l~~i~~ 232 (368)
||+|++++++|+++... ++..|+++++++++ .++.+|++++++++ +++ +++|+ ++|++|...|+++|.+
T Consensus 78 Gd~Vi~~~~~~~~~~~~----~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~ 150 (377)
T 3ju7_A 78 GKYALMPSFTFPATPLA----AIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEE 150 (377)
T ss_dssp CCEEEEESSSCTHHHHH----HHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHH
T ss_pred cCEEEECCCCcHHHHHH----HHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHH
Confidence 99999999999986543 45669999999998 46899999999998 566 88887 4567999999999999
Q ss_pred HHHhcCCEEEEecCCcCCcccccCCCC---CccEEEec--CcCcCCCCcceEEEEcc-cccccCCCcccCCcceeecccC
Q 017640 233 WSHDVGAKVLVDACQSVPHMVVDVQGL---DADFLVAS--SHKMCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLD 306 (368)
Q Consensus 233 l~~~~g~~li~D~a~~~~~~~~~~~~~---~~d~~~~s--~~K~~g~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~ 306 (368)
+|+ ||+++|+|++|++|.. .+.... ..|+.+.| .+|.+++...|+++.++ ++.+.++.....+...
T Consensus 151 la~-~~~~vi~D~a~a~g~~-~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~------ 222 (377)
T 3ju7_A 151 LEK-KGVPVVVDAAPGFGLM-NGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDT------ 222 (377)
T ss_dssp HHH-TTCCBEEECTTCTTCE-ETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCT------
T ss_pred HHh-cCCEEEEECCCccCCe-ECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCC------
Confidence 999 9999999999998865 222112 14565555 57988863377777754 5555555443322210
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 307 HSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 307 ~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
.+......+..+..++...++ +..+ ..++...++.+++++++.+.|.++++
T Consensus 223 --~~~~~~~g~~~~~~~~~aa~~----~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~ 273 (377)
T 3ju7_A 223 --NRECTMMGFNCKMSEYAAAIG----IATM--KKWDDKLKERTRISEWYKQLLQSNGL 273 (377)
T ss_dssp --TSCBCSSCCBCCCCHHHHHHH----HHHH--HTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred --CCceeeccccCCCCHHHHHHH----HHHH--HHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 011111222233333332222 2222 24667778888899999999988754
No 180
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.89 E-value=5.8e-23 Score=194.59 Aligned_cols=216 Identities=18% Similarity=0.190 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHH-HHHcCCEEEEE
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKTGANLKFL 188 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~-~~~~g~~v~~v 188 (368)
.+...++++.++++.|.+ .+++++|+++|+..+ ..+ +++||+|++.++.|++.+..+... .+..|++++++
T Consensus 66 ~p~~~~l~~~la~l~g~~---~~~~~~sG~~Ai~~~-~~l----~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v 137 (400)
T 3nmy_A 66 NPTRFAYERCVAALEGGT---RAFAFASGMAATSTV-MEL----LDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFV 137 (400)
T ss_dssp CHHHHHHHHHHHHHHTCS---EEEEESSHHHHHHHH-HTT----SCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEE
T ss_pred CHHHHHHHHHHHHHhCCC---CEEEecCHHHHHHHH-HHH----cCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEE
Confidence 456678999999999975 567777779999984 445 789999999999999888777766 67789999999
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASS 268 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~ 268 (368)
+.+ |++++++++++++++|++++++||||.+.|+++|.++|++||+++|+|++|+.+... .....++|+++.|+
T Consensus 138 ~~~-----d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~-~~~~~g~div~~S~ 211 (400)
T 3nmy_A 138 DLT-----DPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQ-RPLSLGADLVVHSA 211 (400)
T ss_dssp CTT-----SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHC-CGGGGTCSEEEEET
T ss_pred CCC-----CHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccC-ChhhcCCcEEEecC
Confidence 986 899999999999999999999999999999999999999999999999999854431 11235799999999
Q ss_pred cCcCCCCc---ce-EEEE-cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHH
Q 017640 269 HKMCGPTG---IG-FLFG-KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQ 343 (368)
Q Consensus 269 ~K~~g~~G---~G-~l~~-~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~ 343 (368)
+|++|++| .| ++++ ++++++.++...... ..+.+....+ .++..++. +.
T Consensus 212 sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~---------------------g~~~~~~~a~---~~l~~l~~--l~ 265 (400)
T 3nmy_A 212 TKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSI---------------------GGVQGPFDSF---LALRGLKT--LP 265 (400)
T ss_dssp TTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHH---------------------CCBCCHHHHH---HHHHHHTT--HH
T ss_pred ccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhc---------------------CCCCCHHHHH---HHHHhHhH--HH
Confidence 99887654 45 3444 555655554322111 1122322222 22232222 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC
Q 017640 344 KIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 344 ~i~~~~~~l~~~l~~~l~~~~g 365 (368)
...++..+.+.++.++|++.+.
T Consensus 266 ~r~~~~~~~a~~l~~~L~~~p~ 287 (400)
T 3nmy_A 266 LRMRAHCENALALAQWLETHPA 287 (400)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCC
Confidence 4456667778888888877654
No 181
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.89 E-value=3e-23 Score=208.90 Aligned_cols=235 Identities=16% Similarity=0.126 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
.+.++++.+|+++|++. .+++++|+++++..++.++ +++||+|+++.++|.+.+.. +++..|+++++++..
T Consensus 174 ~i~e~e~~lA~~~gae~--~i~v~nGtt~an~~ai~al----~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~ 244 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADK--TYFVLGGSSNANNTVTSAL----VSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTN 244 (730)
T ss_dssp HHHHHHHHHHHHTTCSE--EEEESSHHHHHHHHHHHHH----CCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEE
T ss_pred HHHHHHHHHHHHHCCCc--EEEECCHHHHHHHHHHHHh----cCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCC
Confidence 56789999999999973 6788888889999999998 89999999999999997654 145679999988765
Q ss_pred CC-----CCCCHHHH-----HHhcccC------c----eEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCc
Q 017640 192 DD-----ESPDLDKL-----KEMLSRK------T----KLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPH 251 (368)
Q Consensus 192 ~~-----~~~d~~~l-----~~~l~~~------~----~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~ 251 (368)
.+ +.+|+++| +++++++ + ++++++++ |++|.+.|+++|+++|++||+++++|++|+.+.
T Consensus 245 ~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~ 323 (730)
T 1c4k_A 245 RNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYE 323 (730)
T ss_dssp ECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGG
T ss_pred ccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEccccccc
Confidence 32 34688888 9998765 5 89999998 689999999999999999999999999997421
Q ss_pred ---------ccccCCCCCcc----EEEecCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCC
Q 017640 252 ---------MVVDVQGLDAD----FLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRF 317 (368)
Q Consensus 252 ---------~~~~~~~~~~d----~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~ 317 (368)
.+++.+.++.| ++++|+||+++ +.++|+++++++.+..-.... +...+......+
T Consensus 324 ~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g~~~~i-----------~~~~~~~~~~~~ 392 (730)
T 1c4k_A 324 QFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKGQLRYC-----------DHKHFNNSFNLF 392 (730)
T ss_dssp GSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTTSTTCC-----------CHHHHHHHHHHH
T ss_pred ccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcCccccc-----------CHHHHHHHHHHh
Confidence 12333334667 99999999665 556789988887642100000 000000001234
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHh-hcCCC
Q 017640 318 EAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQE-RHNTT 367 (368)
Q Consensus 318 ~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~-~~g~t 367 (368)
..+++++..++++.++++++...+.....++..++++++++.|.+ ++|++
T Consensus 393 ~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~ 443 (730)
T 1c4k_A 393 MSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFR 443 (730)
T ss_dssp SCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred CCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeE
Confidence 578999999999999999888733355568899999999999998 67764
No 182
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=4.7e-22 Score=189.87 Aligned_cols=246 Identities=11% Similarity=0.061 Sum_probs=173.0
Q ss_pred CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHH---HccCC
Q 017640 76 TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAY---SWGLS 152 (368)
Q Consensus 76 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~---~~~~~ 152 (368)
.++.++.+.+++.+.+..... .. ..+...+...++++.++++++.+.+++|++|+|+++|+..++. ++
T Consensus 55 lg~~~~~v~~a~~~~~~~~~~-~~-----~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~--- 125 (426)
T 1sff_A 55 TGHLHPKVVAAVEAQLKKLSH-TC-----FQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAA--- 125 (426)
T ss_dssp TCBTCHHHHHHHHHHTTTCSC-CC-----TTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH---
T ss_pred cCCCCHHHHHHHHHHHHhCCC-cc-----ccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHh---
Confidence 345789999999888754311 10 0112245566899999999932332589999999999999988 55
Q ss_pred CCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE-------------EEEEeCCC-----CCCCCHHHHHHhcc-----cCc
Q 017640 153 NLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN-------------LKFLNLND-----DESPDLDKLKEMLS-----RKT 209 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~-------------v~~v~~~~-----~~~~d~~~l~~~l~-----~~~ 209 (368)
.++| .|++.+|.|++........ .|.+ ++.++.+. ++.+|+++|+++++ +++
T Consensus 126 -~~~~-~vi~~~p~y~~~~~~~~~~---~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 200 (426)
T 1sff_A 126 -TKRS-GTIAFSGAYHGRTHYTLAL---TGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDI 200 (426)
T ss_dssp -HTCC-EEEEETTCCCCSSHHHHHH---SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGE
T ss_pred -hCCC-eEEEECCCcCCCchHhhhh---cCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCce
Confidence 5566 8999999998765433322 2332 67777753 23468999999886 467
Q ss_pred eEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCCc--c
Q 017640 210 KLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPTG--I 277 (368)
Q Consensus 210 ~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~G--~ 277 (368)
++|+++. ++| ||.+.+ +++|.++|++||+++|+|++|+ ++.. .++.....+|++ |+||.+|+ | +
T Consensus 201 ~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-Glri 276 (426)
T 1sff_A 201 AAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GFPL 276 (426)
T ss_dssp EEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SSCC
T ss_pred EEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CCce
Confidence 7887754 455 997766 9999999999999999999998 3221 122222346665 77799887 7 7
Q ss_pred eEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Q 017640 278 GFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSI 357 (368)
Q Consensus 278 G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~ 357 (368)
|++++++++++.+.+...+ ...+.+....+++.++++++.+. .+.++..++.+++.
T Consensus 277 G~~~~~~~~~~~l~~~~~~---------------------~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~ 332 (426)
T 1sff_A 277 AGVTGRAEVMDAVAPGGLG---------------------GTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLK 332 (426)
T ss_dssp EEEEEEHHHHTTSCTTSBC---------------------CSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHH
T ss_pred EEEEEcHHHHhhhccCCcC---------------------cCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 9999999988777642211 11256778888888899988763 45677888888888
Q ss_pred HHHHhh
Q 017640 358 IVIQER 363 (368)
Q Consensus 358 ~~l~~~ 363 (368)
+.+.++
T Consensus 333 ~~l~~~ 338 (426)
T 1sff_A 333 DGLLAI 338 (426)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877664
No 183
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.89 E-value=4.6e-22 Score=188.66 Aligned_cols=248 Identities=14% Similarity=0.117 Sum_probs=179.5
Q ss_pred EEeccCCC------CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 69 VYLDNAAT------SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 69 i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
.|+|.... ++.++.+.+++.+.+........ .+ ..+...+++++++++++.+ ++++|+|+++|+
T Consensus 40 ~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~--~~-----~~~~~~~l~~~la~~~~~~---~v~~~~gg~~a~ 109 (406)
T 4adb_A 40 EYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGN--GY-----TNEPVLRLAKKLIDATFAD---RVFFCNSGAEAN 109 (406)
T ss_dssp EEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT--TS-----CCHHHHHHHHHHHHHSSCS---EEEEESSHHHHH
T ss_pred EEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccC--Cc-----CCHHHHHHHHHHHhhCCCC---eEEEeCcHHHHH
Confidence 46665432 34589999999988865322111 01 1344678999999999864 899999999999
Q ss_pred HHHHHHccCCCCC-------CC-CEEEEcCCCCcccHHHHHHHHHH---------cCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 143 NLVAYSWGLSNLK-------SG-DEVILTVAEHHSAIVPWQLVAQK---------TGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 143 ~~~~~~~~~~~~~-------~g-d~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
..++.++ .. +| |.|++.++.|++........... .+.++..++.+ |+++|++++
T Consensus 110 ~~al~~~----~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l 180 (406)
T 4adb_A 110 EAALKLA----RKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN-----DINSASALI 180 (406)
T ss_dssp HHHHHHH----HHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT-----CHHHHHTTC
T ss_pred HHHHHHH----HHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC-----cHHHHHHHh
Confidence 9999877 32 44 89999999999875444332110 01345556554 899999999
Q ss_pred ccCceEEEEccccccccccc--C---HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC
Q 017640 206 SRKTKLVVIHHISNMLASIL--P---IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT 275 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~--~---l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~ 275 (368)
++++++|+++ ++||+|.++ + +++|.++|++||+++|+|++|+ ++.. ..+.....+|++ ++||.+| +
T Consensus 181 ~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~-~ 256 (406)
T 4adb_A 181 DDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG-G 256 (406)
T ss_dssp STTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG-T
T ss_pred cCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc-C
Confidence 9999999999 899999877 3 8899999999999999999996 3221 112223356777 4589888 5
Q ss_pred c--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 276 G--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 276 G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
| +|++++++++++.+.+...+.. .+.+.....++..+++.+.. +.+.++.+++.
T Consensus 257 G~r~G~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~ 312 (406)
T 4adb_A 257 GFPVGALLATEECARVMTVGTHGTT---------------------YGGNPLASAVAGKVLELINT---PEMLNGVKQRH 312 (406)
T ss_dssp TSCCEEEEECHHHHHTCCTTSSCCS---------------------STTCHHHHHHHHHHHHHHSS---HHHHHHHHHHH
T ss_pred CCCeEEEEEcHHHHhhhccCCcCCC---------------------CCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHH
Confidence 6 9999999999888876543221 25667777777777776543 67788888888
Q ss_pred HHHHHHHHhh
Q 017640 354 ICSIIVIQER 363 (368)
Q Consensus 354 ~~l~~~l~~~ 363 (368)
+++.+.|.+.
T Consensus 313 ~~l~~~l~~~ 322 (406)
T 4adb_A 313 DWFVERLNTI 322 (406)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888764
No 184
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.89 E-value=3.7e-23 Score=197.83 Aligned_cols=172 Identities=15% Similarity=0.216 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH--HHHHHHccCCCCC--C----------CCEEEEcCCCCcccHHHHHHH
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAI--NLVAYSWGLSNLK--S----------GDEVILTVAEHHSAIVPWQLV 177 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~--~~~~~~~~~~~~~--~----------gd~vl~~~~~~~s~~~~~~~~ 177 (368)
...++|++++++++++++ +|++|+|+++++ .+++.++ +. + ||+|++.+|+|++. ...
T Consensus 79 g~~~lr~~ia~~~~~~~~-~i~~t~G~~~al~~~~~~~~l----~~~~~g~~~~~~~~~gd~V~v~~p~y~~~----~~~ 149 (427)
T 3ppl_A 79 GIVDIRQIWADLLGVPVE-QVLAGDASSLNIMFDVISWSY----IFGNNDSVQPWSKEETVKWICPVPGYDRH----FSI 149 (427)
T ss_dssp CCHHHHHHHHHHHTSCGG-GEEECSSCHHHHHHHHHHHHH----HHCCTTCSSCGGGSSCCEEEEEESCCHHH----HHH
T ss_pred CcHHHHHHHHHHhCCCcc-eEEEeCCcHHHHHHHHHHHHH----hccCCcccccccCCCCCEEEEcCCCcHHH----HHH
Confidence 345899999999998765 999999999999 5788776 44 5 89999999988874 445
Q ss_pred HHHcCCEEEEEeCCCCCCCCHHHHHHhcc-cCceEEEEc-ccccccccccCHH---HHHHHH-HhcCCEEEEecCCcCCc
Q 017640 178 AQKTGANLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIH-HISNMLASILPIE---EIVHWS-HDVGAKVLVDACQSVPH 251 (368)
Q Consensus 178 ~~~~g~~v~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~-~~~n~tG~~~~l~---~i~~l~-~~~g~~li~D~a~~~~~ 251 (368)
++..|++++.+++++++ +|+++|+++++ +++++|++. +++||||.++|.+ +|.++| ++||+++|+|++|+...
T Consensus 150 ~~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~ 228 (427)
T 3ppl_A 150 TERFGFEMISVPMNEDG-PDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHT 228 (427)
T ss_dssp HHHTTCEEEEEEEETTE-ECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCB
T ss_pred HHHcCCEEEEeCCCCCC-CCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccc
Confidence 56679999999998776 89999999995 678888754 8999999999966 888888 99999999999998421
Q ss_pred c------cccC-------CCCCccEEEecCcCcCCC-CcceEEEEcccccccCCCc
Q 017640 252 M------VVDV-------QGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 252 ~------~~~~-------~~~~~d~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~ 293 (368)
. ++++ +..+.+++++|+||..++ -++||+++++++++.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~ 284 (427)
T 3ppl_A 229 LTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGH 284 (427)
T ss_dssp SSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHH
T ss_pred cCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHH
Confidence 1 1111 134678999999997332 3399999999888776543
No 185
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.89 E-value=1.3e-22 Score=195.16 Aligned_cols=265 Identities=15% Similarity=0.105 Sum_probs=188.0
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHHHHHHHHH-HHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKATDEYELAR-KKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~r-~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+.+.|.. +..+.++.+++++.+.+...+ +++. ..+..+....+..+++. +.+++++|.+. ..++++|+++|+.
T Consensus 46 ~~i~l~~-~~~~~~~~v~~a~~~~~~~~~~~g~~~-~~~~~g~~~~~~~e~~a~~~la~~~g~~~--~~v~~~sGs~a~~ 121 (447)
T 3h7f_A 46 DTLEMIA-SENFVPRAVLQAQGSVLTNKYAEGLPG-RRYYGGCEHVDVVENLARDRAKALFGAEF--ANVQPHSGAQANA 121 (447)
T ss_dssp HSEECCT-TCCCCCHHHHHHHTSGGGGCCCCEETT-EESSSCCHHHHHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHH
T ss_pred CceeEec-CCCCCCHHHHHHHHHHhcCCccccCCc-ccccCccHHHHHHHHHHHHHHHHHcCCCc--eEEEeCCHHHHHH
Confidence 3466744 345669999999988765322 1221 11222333344445555 99999999873 3343788899999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHH-HHHHHHHHcCCEEEEEeCC-CCCCCCHHHHHHhcc-cCceEEEEcccccc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIV-PWQLVAQKTGANLKFLNLN-DDESPDLDKLKEMLS-RKTKLVVIHHISNM 220 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~-~~~~~~~~~g~~v~~v~~~-~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~ 220 (368)
.++.++ +++||+|++.+++|++.+. .........+..++.++++ +++.+|+++|++++. .++++|++++++||
T Consensus 122 ~a~~~~----~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~i~~~~~~~~ 197 (447)
T 3h7f_A 122 AVLHAL----MSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLIDMDAVRATALEFRPKVIIAGWSAYP 197 (447)
T ss_dssp HHHHHH----CCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSCCHHHHHHHHHHHCCSEEEEECSSCC
T ss_pred HHHHHh----cCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCcCHHHHHHHHHhcCCeEEEEcCCCCC
Confidence 999998 8999999999999877321 1110111125567777776 457899999999995 47899999899998
Q ss_pred cccccCHHHHHHHHHhcCCEEEEecCCcCCccc----ccCCCCCccEEEecCcCcCC-CCcceEEEEcccccccCCCccc
Q 017640 221 LASILPIEEIVHWSHDVGAKVLVDACQSVPHMV----VDVQGLDADFLVASSHKMCG-PTGIGFLFGKSDLLSAMPPFLG 295 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~----~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~li~~l~~~~~ 295 (368)
++. ++++|.++|++||+++|+|++|+.|... .+.. .+.|++++|+||.++ +.| |++++++++++.+.+...
T Consensus 198 ~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~~~~~ 273 (447)
T 3h7f_A 198 RVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKTLGGGRS-GLIVGKQQYAKAINSAVF 273 (447)
T ss_dssp SCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGGGCCCSC-EEEEECGGGHHHHHHHHT
T ss_pred Ccc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcCCCCCCe-EEEEECHHHHHHHhhhcC
Confidence 876 9999999999999999999998754321 1111 257899999999765 555 999999988776654322
Q ss_pred CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 296 GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+ +..|+++...++++..++....+.+++...++..++++++.+.|.+.
T Consensus 274 ~--------------------~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 274 P--------------------GQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp T--------------------TTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSH
T ss_pred C--------------------cccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 12357777778888888776554456778888889999999888765
No 186
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.89 E-value=2.8e-22 Score=203.41 Aligned_cols=226 Identities=11% Similarity=0.070 Sum_probs=176.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
..+.+.++.+++++|.+ +.+++++|+++++..++.++ +++||.|+++.++|.++...+ ...|+++++++.
T Consensus 205 g~v~~~ee~la~l~G~d--~~i~~~~Gtt~a~~~~i~al----~~~GD~Vlv~~~~h~s~~~~~----~~~G~~~v~v~~ 274 (755)
T 2vyc_A 205 GAFGESEKYAARVFGAD--RSWSVVVGTSGSNRTIMQAC----MTDNDVVVVDRNCHKSIEQGL----MLTGAKPVYMVP 274 (755)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHH----CCTTCEEEEESSCCHHHHHHH----HHHCCEEEEECC
T ss_pred cHHHHHHHHHHHHhCCC--ceEEECCcHHHHHHHHHHHh----cCCCCEEEECCCchHHHHHHH----HHcCCEEEEEeC
Confidence 34668999999999986 36788899899999999998 899999999999999977653 445999999988
Q ss_pred CCC-----CCC-----CHHHHHHhccc--Cce--------EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCC
Q 017640 191 NDD-----ESP-----DLDKLKEMLSR--KTK--------LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVP 250 (368)
Q Consensus 191 ~~~-----~~~-----d~~~l~~~l~~--~~~--------~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~ 250 (368)
+.+ +.+ |+++|++++++ +++ +++++++ |++|.+.|+++|+++|++||+++++|++|+.+
T Consensus 275 ~~~~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~ 353 (755)
T 2vyc_A 275 SRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGY 353 (755)
T ss_dssp CBCTTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTT
T ss_pred CCCccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchh
Confidence 643 345 99999999964 344 8888987 79999999999999999999999999999753
Q ss_pred cc--cc--cCCC-CC--ccE------EEecCcCcCC-CCcceEEEEccc--ccccCCCcccCCcceeecccCCCCCCCCC
Q 017640 251 HM--VV--DVQG-LD--ADF------LVASSHKMCG-PTGIGFLFGKSD--LLSAMPPFLGGGEMISDVFLDHSTFADPP 314 (368)
Q Consensus 251 ~~--~~--~~~~-~~--~d~------~~~s~~K~~g-~~G~G~l~~~~~--li~~l~~~~~g~~~~~~~~~~~~~~~~~~ 314 (368)
.. +. +... .+ .|+ ++.|+||+++ +.++|+++++++ .++..+ .. ...
T Consensus 354 ~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~-~~-----------------~~~ 415 (755)
T 2vyc_A 354 ARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSR-FN-----------------QAY 415 (755)
T ss_dssp GGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHH-HH-----------------HHH
T ss_pred cccCcccCCcchhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHH-HH-----------------HHH
Confidence 21 10 1111 23 465 9999999665 556899988876 221100 00 000
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 315 SRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 315 ~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
..+..+++++..++++.++++++...|.+.+.++..++++++++.|.+++|
T Consensus 416 ~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~ 466 (755)
T 2vyc_A 416 MMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_dssp HHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 245578999999999999999988775577889999999999999998766
No 187
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.89 E-value=1.3e-22 Score=192.85 Aligned_cols=263 Identities=12% Similarity=0.036 Sum_probs=178.5
Q ss_pred CCeEEeccCCC-C-CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CCCC----CCcEE--EeC
Q 017640 66 KKLVYLDNAAT-S-QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NASD----SGEIV--FTK 136 (368)
Q Consensus 66 ~~~i~l~~~~~-~-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~~----~~~v~--~t~ 136 (368)
++++.|..+.+ . +.++.+.+++.+... . ....+. ......++|+.+++++ |... +++|. .|.
T Consensus 41 ~~~i~l~~g~~~d~~~~~~v~~a~~~a~~----~-~~~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~ 111 (409)
T 4eu1_A 41 KRKVNLSIGVYRDDADQPFVLECVKQATL----G-TNMDYA----PVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTL 111 (409)
T ss_dssp SSCEECCCSSCCCTTSCCCCCHHHHTCCC----C-SCCCCC----CTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEES
T ss_pred cCceeeeeeEEECCCCCEeecHHHHhcCc----c-ccccCC----CCCCcHHHHHHHHHHHcCCCchhhccCceeeeecc
Confidence 56788888875 4 445566666665511 1 001111 1222347888999876 6551 34774 489
Q ss_pred CHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC--CCCCCCHHHHHHhcc---cCceE
Q 017640 137 NATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN--DDESPDLDKLKEMLS---RKTKL 211 (368)
Q Consensus 137 g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~---~~~~~ 211 (368)
|+++++..+...+. ...++||+|++.+|.|++. ...++..|++++.+++. +++.+|+++|+++++ +++++
T Consensus 112 ~g~ga~~~~~~~~~-~~~~~gd~Vlv~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 186 (409)
T 4eu1_A 112 GGTGALRIGGDLLN-RFVANCNRIYGPDVGYPNH----ESIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVI 186 (409)
T ss_dssp HHHHHHHHHHHHGG-GTSSSCCEEEEESSCCTHH----HHHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEE
T ss_pred cchHHHHHHHHHHH-HhcCCCCEEEEeCCCcHhH----HHHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEE
Confidence 99999988754331 1368899999999998874 44456679999999983 457889999999995 35677
Q ss_pred EEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc--------cc-cC-CCCCccEEEecCcCcCCCCc--
Q 017640 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--------VV-DV-QGLDADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~--------~~-~~-~~~~~d~~~~s~~K~~g~~G-- 276 (368)
+++++++||||.+++ +++|+++|++||+++|+|++|+.... ++ .+ ......++++|+||.||++|
T Consensus 187 i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r 266 (409)
T 4eu1_A 187 LVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHR 266 (409)
T ss_dssp EEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGC
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccccCccCC
Confidence 788999999999999 55699999999999999999873321 11 11 22345688999999999888
Q ss_pred ceEE--EE-ccc----ccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----HhCHHH
Q 017640 277 IGFL--FG-KSD----LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS-----TIGMQK 344 (368)
Q Consensus 277 ~G~l--~~-~~~----li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~-----~~g~~~ 344 (368)
+|++ ++ +++ +++.++..... ...+++.....++..+++... ...++.
T Consensus 267 iG~~~~v~~~~~~~~~l~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 325 (409)
T 4eu1_A 267 CGALHISTASAEEAKRLVSQLALLIRP---------------------MYNNPPLYGAWVVSSILKDPQLTALWKKELKQ 325 (409)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHHH---------------------HHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHHHHhh---------------------hcCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 8996 44 455 44444322111 011455666666666665321 113677
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 017640 345 IHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 345 i~~~~~~l~~~l~~~l~~~ 363 (368)
++++..++.+++.+.|.+.
T Consensus 326 ~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 326 MSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8888889999999998875
No 188
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.89 E-value=1.7e-21 Score=186.98 Aligned_cols=199 Identities=19% Similarity=0.176 Sum_probs=152.0
Q ss_pred CCeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 66 KKLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 66 ~~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
++.|.+. ...+++.+.+++.+.+.... +.. .....++|+.+++++|.+ ++++++|+|+|+..+
T Consensus 31 ~~~i~~~---~~~~~~~~~~a~~~~~~~~~-------~~~----~~~~~~l~~~la~~~g~~---~~i~~~sGt~a~~~a 93 (437)
T 3bb8_A 31 KSVVPPS---GKVIGTKELQLMVEASLDGW-------LTT----GRFNDAFEKKLGEYLGVP---YVLTTTSGSSANLLA 93 (437)
T ss_dssp TSCBCSC---CCCCCHHHHHHHHHHHHHCC-------CBS----CHHHHHHHHHHHHHHTCS---EEEEESCHHHHHHHH
T ss_pred CccccCC---CCCCCHHHHHHHHHHHHcCC-------cCC----ChHHHHHHHHHHHHHCCC---cEEEeCCHHHHHHHH
Confidence 3345553 23456788888888876421 111 234668999999999986 678888999999999
Q ss_pred HHHccC-----CCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC-CCCCCHHHHHHhcccCceEEEEccccc
Q 017640 146 AYSWGL-----SNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND-DESPDLDKLKEMLSRKTKLVVIHHISN 219 (368)
Q Consensus 146 ~~~~~~-----~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~~~~~~v~~~~~~n 219 (368)
+.++.. ..+++||+|+++.++|++....+ +..|++++.+++++ ++.+|+++|++++++++++|++++
T Consensus 94 l~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~--- 166 (437)
T 3bb8_A 94 LTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIPVFVDVDIPTYNVNASLIEAAVSDKTKAIMIAH--- 166 (437)
T ss_dssp HHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEEEECCEETTTTEECGGGHHHHCCTTEEEEEEEC---
T ss_pred HHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEEeccCccCCcCHHHHHHhcCCCCeEEEEeC---
Confidence 998720 01678999999999999976544 45699999999875 688999999999998999999876
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCC--ccEEEecCcCcCCCC-c-ceEEEEccccccc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLD--ADFLVASSHKMCGPT-G-IGFLFGKSDLLSA 289 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~--~d~~~~s~~K~~g~~-G-~G~l~~~~~li~~ 289 (368)
++|...|+++|.++|+++|+++|+|++|+.|... +....+ .|+++.|++|.++.+ | +|+++.+++.+..
T Consensus 167 ~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~~~~d~~~~s~~~~k~l~~g~gg~~~~~~~~~~~ 239 (437)
T 3bb8_A 167 TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAGTFGDIGTVSFYPAKHITMGEGGAVFTQSAELKS 239 (437)
T ss_dssp GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETTSSSSEEEEECSTTSSSCCSSCEEEEESCHHHHH
T ss_pred CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecccccCEEEEECcCCcCCCCCCeEEEEeCCHHHHH
Confidence 4677789999999999999999999999988764 443344 789888876644422 2 7898888765443
No 189
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.88 E-value=3.1e-22 Score=191.14 Aligned_cols=211 Identities=17% Similarity=0.285 Sum_probs=155.5
Q ss_pred CCeEEeccCCCC----CCcHHHHHHHH--HHHHHhhccCCCCcchhhH-HHHHHHHHHHHHHHHHcCCCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAATS----QKPIAVLKALQ--NYYEAYNSNVHRGIHFLSA-KATDEYELARKKVAAFINASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~~~----~~~~~v~~a~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~ 138 (368)
.+.+.|..+.+. +.++.+.+++. +.+.. . .....+ .......++|+.++++++++++ +|++|+|+
T Consensus 25 ~~~i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~--~-----~~~~~Yp~~~~g~~~lr~~ia~~~~~~~~-~i~~t~G~ 96 (423)
T 3ez1_A 25 GLNLNMQRGQPADADFDLSNGLLTVLGAEDVRMD--G-----LDLRNYPGGVAGLPSARALFAGYLDVKAE-NVLVWNNS 96 (423)
T ss_dssp TCCEESCCCCCCHHHHHTTGGGGGSCCGGGCEET--T-----EETTSSCSCTTCCHHHHHHHHHHTTSCGG-GEEECSSC
T ss_pred CceEecCCCCCChHhCCCcHHHHHHHhhhHHhhc--c-----hhhhCCCCCCCChHHHHHHHHHHhCCChh-hEEEeCCc
Confidence 456888888766 34556777664 33221 0 000111 1123344899999999998765 99999999
Q ss_pred HHHHH--HHHHHccCCCCC--C---------CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 139 TEAIN--LVAYSWGLSNLK--S---------GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 139 t~a~~--~~~~~~~~~~~~--~---------gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
++++. +++.++ +. + ||+|++.+|+|++.. ..++..|++++.++.++++ +|+++|++++
T Consensus 97 ~~al~~~~~~~~l----~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~g-~d~~~l~~~l 167 (423)
T 3ez1_A 97 SLELQGLVLTFAL----LHGVRGSTGPWLSQTPKMIVTVPGYDRHF----LLLQTLGFELLTVDMQSDG-PDVDAVERLA 167 (423)
T ss_dssp HHHHHHHHHHHHH----HTCCTTCSSCGGGGCCEEEEEESCCHHHH----HHHHHHTCEEEEEEEETTE-ECHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hccCCCccccccCCCCEEEEcCCCcHHHH----HHHHHcCCEEEeccCCCCC-CCHHHHHHHH
Confidence 99998 888877 45 6 699999999888754 3455569999999998765 8999999999
Q ss_pred --ccCceEEE-EcccccccccccCHH---HHHHHH-HhcCCEEEEecCCcCCcc-------cccC-------CCCCccEE
Q 017640 206 --SRKTKLVV-IHHISNMLASILPIE---EIVHWS-HDVGAKVLVDACQSVPHM-------VVDV-------QGLDADFL 264 (368)
Q Consensus 206 --~~~~~~v~-~~~~~n~tG~~~~l~---~i~~l~-~~~g~~li~D~a~~~~~~-------~~~~-------~~~~~d~~ 264 (368)
.+++++|+ +++++||||.++|.+ +|.++| ++||+++|+|++|+.... ..++ +..+.+++
T Consensus 168 ~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 247 (423)
T 3ez1_A 168 GTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFV 247 (423)
T ss_dssp HSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEE
T ss_pred hhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEE
Confidence 56888886 568999999999965 888888 899999999999983211 1111 23467899
Q ss_pred EecCcCc-CCCCcceEEEEcccccccCCCc
Q 017640 265 VASSHKM-CGPTGIGFLFGKSDLLSAMPPF 293 (368)
Q Consensus 265 ~~s~~K~-~g~~G~G~l~~~~~li~~l~~~ 293 (368)
+.|+||. +++.++|++++++++++.+...
T Consensus 248 ~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~ 277 (423)
T 3ez1_A 248 FASTSKITFAGAGLGFVASSEDNIRWLSKY 277 (423)
T ss_dssp EEESTTTSCSSSSCEEEEECHHHHHHHHHH
T ss_pred EeCchhhccCCcceEEEEeCHHHHHHHHHH
Confidence 9999995 3344499999999988776543
No 190
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.88 E-value=3.6e-22 Score=190.35 Aligned_cols=265 Identities=16% Similarity=0.113 Sum_probs=170.6
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHHH-HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKAT-DEYELARKKVAAFINASDSGEIVFTKNATEAINLV 145 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~ 145 (368)
+.+..+ ..+.++.+.+++.+.+...+ .++.. .+..+.... ...+..++.+++++|.+. ..++++|+++|+..+
T Consensus 35 i~l~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~v~~~~Gs~a~~~a 110 (425)
T 3ecd_A 35 VELIAS-ENIVSRAVLDAQGSVLTNKYAEGYPGK-RYYGGCEFADEVEALAIERVKRLFNAGH--ANVQPHSGAQANGAV 110 (425)
T ss_dssp EECCTT-CCCCCHHHHHHHTSGGGSSCTTC-------------CCHHHHHHHHHHHHHHTCSE--EECCCSSHHHHHHHH
T ss_pred eeeecc-cCCCCHHHHHHHhhhhhcccccCCCcc-hhcCCChHHHHHHHHHHHHHHHHhCCCC--ceeecCchHHHHHHH
Confidence 455433 34559999999988764321 11111 111111111 233345688999999863 335688999999999
Q ss_pred HHHccCCCCCCCCEEEEcCCCCcccHHHHHHH-HHHcCCEEEEEeCCC-CCCCCHHHHHHhcc-cCceEEEEcccccccc
Q 017640 146 AYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV-AQKTGANLKFLNLND-DESPDLDKLKEMLS-RKTKLVVIHHISNMLA 222 (368)
Q Consensus 146 ~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~-~~~~g~~v~~v~~~~-~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG 222 (368)
+.++ +++||+|++.+++|++........ ....+.+++.++.++ ++.+|+++|+++++ +++++|++++++| |
T Consensus 111 l~~~----~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~--~ 184 (425)
T 3ecd_A 111 MLAL----AKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTMLIDYDQVEALAQQHKPSLIIAGFSAY--P 184 (425)
T ss_dssp HHHH----CCTTCEEEEECC------------------CEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEEECSCC--C
T ss_pred HHHc----cCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccCccCHHHHHHHHhhcCCcEEEEccccC--C
Confidence 9988 899999999999998833212111 111233566666663 47889999999997 5899999998887 4
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCcCCccccc--CC-CCCccEEEecCcCcCCCCcceEEEEcc-cccccCCCcccCCc
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQSVPHMVVD--VQ-GLDADFLVASSHKMCGPTGIGFLFGKS-DLLSAMPPFLGGGE 298 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~--~~-~~~~d~~~~s~~K~~g~~G~G~l~~~~-~li~~l~~~~~g~~ 298 (368)
...++++|.++|++||+++|+|++|+.+...-. .. ....|++++|+||.++++.+|++++++ ++.+.+.+....+
T Consensus 185 ~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~g~~~~~~~~~~~~~~~~~~~~- 263 (425)
T 3ecd_A 185 RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRGGFVLTNDEEIAKKINSAVFPG- 263 (425)
T ss_dssp SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSCEEEEESCHHHHHHHHHHHC---
T ss_pred CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCcEEEEeCCHHHHHHHHhhhCcc-
Confidence 678899999999999999999999875443111 00 113789999999977433369999885 5555544332211
Q ss_pred ceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 299 MISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
..++++...++++..++......+++.+.++..++.+++.+.|.+.
T Consensus 264 -------------------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (425)
T 3ecd_A 264 -------------------LQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG 309 (425)
T ss_dssp ----------------------CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------ccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 1236777777777777765544457788899999999999999873
No 191
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.88 E-value=1.4e-22 Score=193.57 Aligned_cols=175 Identities=18% Similarity=0.220 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHcCCCCCC-cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC-CCCcccHHHHH------HHHHHcCC
Q 017640 112 EYELARKKVAAFINASDSG-EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV-AEHHSAIVPWQ------LVAQKTGA 183 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~-~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~-~~~~s~~~~~~------~~~~~~g~ 183 (368)
..+++++.+++++|.+... +++++ |+|+|+..++.++ +++||+|++.+ +.|.+....+. ..++..|+
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al----~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~ 140 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGI----LRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNI 140 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTT----CCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTC
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHh----CCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCC
Confidence 3678999999999997431 22244 7789999999988 89999999998 88887543321 23355799
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc-ccccccccc---CHHHHHHHHHh--cCCEEEEecCCcCCcccccCC
Q 017640 184 NLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH-ISNMLASIL---PIEEIVHWSHD--VGAKVLVDACQSVPHMVVDVQ 257 (368)
Q Consensus 184 ~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~-~~n~tG~~~---~l~~i~~l~~~--~g~~li~D~a~~~~~~~~~~~ 257 (368)
+++.++.++++.+|+++|++++++++++|++++ ++||+|... ++++|.++|++ +|+++++|++|+.+....+..
T Consensus 141 ~~~~v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~ 220 (431)
T 3ht4_A 141 GYNAVPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC 220 (431)
T ss_dssp EEEECCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG
T ss_pred EEEEeCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc
Confidence 999999998899999999999999999999995 666666555 48899999999 999999999999776433333
Q ss_pred CCCccEEEecCcCcCC----CCcceEEEEcccccccCCC
Q 017640 258 GLDADFLVASSHKMCG----PTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 258 ~~~~d~~~~s~~K~~g----~~G~G~l~~~~~li~~l~~ 292 (368)
..+.|++++|++|.+| +.| |++++++++++.++.
T Consensus 221 ~~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~ 258 (431)
T 3ht4_A 221 HVGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAY 258 (431)
T ss_dssp GTTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHH
T ss_pred ccCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHH
Confidence 4578999999999744 555 999999998887764
No 192
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.88 E-value=1.3e-21 Score=185.03 Aligned_cols=252 Identities=13% Similarity=0.111 Sum_probs=176.8
Q ss_pred eEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
.-|+|..+ .|+.++.+.+++.+.+....... .....+...++++++++++|. +++++++|+++|
T Consensus 36 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-------~~~~~~~~~~l~~~la~~~~~---~~v~~~~gg~ea 105 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTS-------NLYYNENIAAAAKNLAKASAL---ERVFFTNSGTES 105 (395)
T ss_dssp CEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCC-------TTSBCHHHHHHHHHHHHHHTC---SEEEEESSHHHH
T ss_pred CEEEECCCcHHhccCCCCCHHHHHHHHHHHHhccccc-------cccCCHHHHHHHHHHHHhcCC---CeEEEeCCHHHH
Confidence 34677653 23568999999998886532111 111245667899999999983 389999999999
Q ss_pred HHHHHHHccCCCC-----CCCCEEEEcCCCCcccHHHHHHH---------HHHcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 142 INLVAYSWGLSNL-----KSGDEVILTVAEHHSAIVPWQLV---------AQKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 142 ~~~~~~~~~~~~~-----~~gd~vl~~~~~~~s~~~~~~~~---------~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
+..++.++.. . .+++.|++.++.|++........ ....+.++..++.+ |+++|++++++
T Consensus 106 ~~~al~~~~~--~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~ 178 (395)
T 3nx3_A 106 IEGAMKTARK--YAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN-----DISSVEKLVNE 178 (395)
T ss_dssp HHHHHHHHHH--HHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT-----CHHHHHTTCCT
T ss_pred HHHHHHHHHH--HhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC-----CHHHHHHhccC
Confidence 9999987621 1 46799999999998764322211 11123466677665 89999999998
Q ss_pred CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCC-Ccc
Q 017640 208 KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGP-TGI 277 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~-~G~ 277 (368)
++++|++++++|++|.+.+ +++|.++|++||+++|+|++|+ ++.. ..+.....+|+++ ++|.+|+ .++
T Consensus 179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t--~sK~~~~G~~~ 256 (395)
T 3nx3_A 179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMT--SAKALGCGLSV 256 (395)
T ss_dssp TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEE--ECGGGTTTSCC
T ss_pred CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEE--ecccccCCCce
Confidence 8999999999999999987 9999999999999999999987 4322 1222233466664 5697664 248
Q ss_pred eEEEEcccc-cccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Q 017640 278 GFLFGKSDL-LSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICS 356 (368)
Q Consensus 278 G~l~~~~~l-i~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l 356 (368)
|++++++++ ++.+.+...+.+. +.+..+.+++.++++.+.+. .+.++.+++.+++
T Consensus 257 G~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~aa~aal~~~~~~---~~~~~~~~~~~~~ 312 (395)
T 3nx3_A 257 GAFVINQKVASNSLEAGDHGSTY---------------------GGNPLVCAGVNAVFEIFKEE---KILENVNKLTPYL 312 (395)
T ss_dssp EEEEECHHHHHHHSCTTCCSSCB---------------------SCCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHH
T ss_pred EEEEEchhhhhhhcCCcccCCCC---------------------CCCHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHH
Confidence 999999998 7777765433222 45777777788888877553 3445555555555
Q ss_pred HHHHHh
Q 017640 357 IIVIQE 362 (368)
Q Consensus 357 ~~~l~~ 362 (368)
.+.|.+
T Consensus 313 ~~~l~~ 318 (395)
T 3nx3_A 313 EQSLDE 318 (395)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 193
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.88 E-value=1.4e-21 Score=186.67 Aligned_cols=248 Identities=18% Similarity=0.141 Sum_probs=176.3
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|..+ .++.++.+.+++.+.+..+.... . .+ ..+...++++.+++++|. ++|++|+|+++
T Consensus 56 g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~-~-~~-----~~~~~~~l~~~la~~~g~---~~v~~~~ggte 125 (420)
T 2pb2_A 56 GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTS-N-VF-----TNEPALRLGRKLIDATFA---ERVLFMNSGTE 125 (420)
T ss_dssp CCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCC-T-TS-----CCHHHHHHHHHHHHHSSC---SEEEEESSHHH
T ss_pred CCEEEEccccccccccCCCCHHHHHHHHHHHHhccccc-C-cc-----CCHHHHHHHHHHHhhCCC---CeEEEeCCHHH
Confidence 345666643 34578999999999886542111 0 01 235567899999999984 38999999999
Q ss_pred HHHHHHHHccCCCCC-------CC-CEEEEcCCCCcccHHHHHHHHHHcCC------------EEEEEeCCCCCCCCHHH
Q 017640 141 AINLVAYSWGLSNLK-------SG-DEVILTVAEHHSAIVPWQLVAQKTGA------------NLKFLNLNDDESPDLDK 200 (368)
Q Consensus 141 a~~~~~~~~~~~~~~-------~g-d~vl~~~~~~~s~~~~~~~~~~~~g~------------~v~~v~~~~~~~~d~~~ 200 (368)
|+..++.++ .. +| ++|++.++.|++........ .|. .+..++.+ |+++
T Consensus 126 A~~~al~~~----~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~---~g~~~~~~~~~p~~~~~~~~~~~-----d~~~ 193 (420)
T 2pb2_A 126 ANETAFKLA----RHYACVRHSPFKTKIIAFHNAFHGRSLFTVSV---GGQPKYSDGFGPKPADIIHVPFN-----DLHA 193 (420)
T ss_dssp HHHHHHHHH----HHHHHHHTCTTCCEEEEETTCCCCSSHHHHHH---SSCHHHHTTSSSCCSCEEEECTT-----CHHH
T ss_pred HHHHHHHHH----HHHhhhccCCCCCEEEEEeCCcCCcCHHHHHh---cCCccccccCCCCCCCeEEecCC-----CHHH
Confidence 999999987 32 56 58999999998765433322 232 25666653 8999
Q ss_pred HHHhcccCceEEEEcccccccccc-cC---HHHHHHHHHhcCCEEEEecCCc-CCcc--c--ccCCCCCccEEEecCcCc
Q 017640 201 LKEMLSRKTKLVVIHHISNMLASI-LP---IEEIVHWSHDVGAKVLVDACQS-VPHM--V--VDVQGLDADFLVASSHKM 271 (368)
Q Consensus 201 l~~~l~~~~~~v~~~~~~n~tG~~-~~---l~~i~~l~~~~g~~li~D~a~~-~~~~--~--~~~~~~~~d~~~~s~~K~ 271 (368)
|++++++++++|++++++|++|.+ +| +++|.++|++||+++|+|++|. ++.. . ++.....+|++ +++|.
T Consensus 194 le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~dii--t~sK~ 271 (420)
T 2pb2_A 194 VKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDIL--TSAKA 271 (420)
T ss_dssp HHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGG
T ss_pred HHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeE--Eeccc
Confidence 999999899999999999988863 44 8999999999999999999996 3221 1 12222357877 56798
Q ss_pred CCCCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 272 CGPTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 272 ~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
+| +| +|++++++++++.+.+...+. .| +.+..+.+++.++++.+.+ +.+.++.
T Consensus 272 l~-~G~~iG~~~~~~~l~~~l~~~~~~~------------------t~---~~~~~~~aa~~a~L~~~~~---~~~~~~~ 326 (420)
T 2pb2_A 272 LG-GGFPVSAMLTTQEIASAFHVGSHGS------------------TY---GGNPLACAVAGAAFDIINT---PEVLQGI 326 (420)
T ss_dssp GG-TTSCCEEEEECHHHHTTCC----CC------------------EE---CCCHHHHHHHHHHHHHHSS---HHHHHHH
T ss_pred cc-CCCceEEEEEhHHHHHhhcCCCcCc------------------cc---CcCHHHHHHHHHHHHHHHh---ccHHHHH
Confidence 87 34 999999998877776532111 11 4567777777777877654 5677888
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
+++.+++.+.|.+.
T Consensus 327 ~~~~~~l~~~L~~~ 340 (420)
T 2pb2_A 327 HTKRQQFVQHLQAI 340 (420)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888888764
No 194
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.88 E-value=5.6e-21 Score=182.29 Aligned_cols=258 Identities=12% Similarity=0.033 Sum_probs=176.1
Q ss_pred CeEEeccCC------CCCC-cHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 67 KLVYLDNAA------TSQK-PIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 67 ~~i~l~~~~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
+..|+|... .++. ++.+.+++.+.+........ ..+ ..+...++++.+++++|.+.+++|++|+|++
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ 114 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAA-NDF-----YNIPQLELAKKLVTYSPGNFQKKVFFSNSGT 114 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSC-SCS-----CCHHHHHHHHHHHHHSSCSSCEEEEEESSHH
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccc-ccc-----CCHHHHHHHHHHHHhCCCCcCCEEEEeCchH
Confidence 335666643 2344 79999999998865421100 001 1234457889999999986224999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHH-----H-----cCCEEEEEeCCCCCC--------------
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----K-----TGANLKFLNLNDDES-------------- 195 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-----~-----~g~~v~~v~~~~~~~-------------- 195 (368)
+|+..++.++. ..+||+|++.+|.|++.......... . ...+++.++.+.++.
T Consensus 115 ea~~~ai~~~~---~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~ 191 (419)
T 2eo5_A 115 EAIEASIKVVK---NTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSEL 191 (419)
T ss_dssp HHHHHHHHHHH---TTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHH
T ss_pred HHHHHHHHHHH---HhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhh
Confidence 99999998752 11389999999999876543333211 0 113577888764432
Q ss_pred --CCHHHHH-Hhcc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCC
Q 017640 196 --PDLDKLK-EMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQG 258 (368)
Q Consensus 196 --~d~~~l~-~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~ 258 (368)
+|+++|+ ++++ +++++|+++..+|+||.+.+ +++|.++|++||+++|+|++|+ ++.. .++...
T Consensus 192 ~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~ 271 (419)
T 2eo5_A 192 VNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFN 271 (419)
T ss_dssp HHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGT
T ss_pred HHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcC
Confidence 3688999 8886 35677777766778998776 9999999999999999999998 5432 122223
Q ss_pred CCccEEEecCcCcCCC--CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 259 LDADFLVASSHKMCGP--TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 259 ~~~d~~~~s~~K~~g~--~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
..+|++ |++|.+|+ -++|+++++++++ .+ ....+ ...+.|..+++++.++++.
T Consensus 272 ~~~d~~--t~sK~~~~G~~riG~~~~~~~~~-~~-~~~~~---------------------~t~~~n~~~~~aa~aal~~ 326 (419)
T 2eo5_A 272 TVPDVI--TLAKALGGGIMPIGATIFRKDLD-FK-PGMHS---------------------NTFGGNALACAIGSKVIDI 326 (419)
T ss_dssp CCCSEE--EECGGGGTTTSCCEEEEEEGGGC-CC----------------------------CCCCCHHHHHHHHHHHHH
T ss_pred CCCCEE--EecccccCCccceEEEEEchHhh-cC-CcccC---------------------CCCCCCHHHHHHHHHHHHH
Confidence 356766 57797764 3489999999876 55 21111 1125577888888888887
Q ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 337 LSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 337 ~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+ +.++.+++.+++.+.|.++
T Consensus 327 ~~~-----~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 327 VKD-----LLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHTTS
T ss_pred HHH-----HHHHHHHHHHHHHHHHHHh
Confidence 654 6788888889998888764
No 195
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.88 E-value=1.2e-20 Score=180.68 Aligned_cols=256 Identities=11% Similarity=0.096 Sum_probs=172.7
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|..+ .++.++.+.+++.+.+..... ...+ + ..+...++++.+++++|. ++|+|++|+++
T Consensus 64 G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~-~~~~-~-----~~~~~~~l~~~la~~~g~---~~v~~~~sGse 133 (433)
T 1z7d_A 64 DKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI-CSRA-F-----FSVPLGICERYLTNLLGY---DKVLMMNTGAE 133 (433)
T ss_dssp CCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSC-CCTT-S-----EEHHHHHHHHHHHHHHTC---SEEEEESSHHH
T ss_pred CCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCC-ccCC-c-----CCHHHHHHHHHHHhhcCC---CeEEEeCCHHH
Confidence 345677543 334789999999998865421 1111 1 134556889999999974 38999999999
Q ss_pred HHHHHHHHccC-----CCCCCC-CEEEEcCCCCcccHHHHHHHHHH---------cCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 141 AINLVAYSWGL-----SNLKSG-DEVILTVAEHHSAIVPWQLVAQK---------TGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 141 a~~~~~~~~~~-----~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
|+..++.++.. ..+.+| +.|++.++.|++.......+... ...++..++.+ |+++|++++
T Consensus 134 A~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le~~l 208 (433)
T 1z7d_A 134 ANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD-----DLEALEEEL 208 (433)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTT-----CHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC-----CHHHHHHHh
Confidence 99999987521 012467 89999999998765433222110 00345566653 899999999
Q ss_pred -ccCceEEEEccccccccccc----CHHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCCCC
Q 017640 206 -SRKTKLVVIHHISNMLASIL----PIEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCGPT 275 (368)
Q Consensus 206 -~~~~~~v~~~~~~n~tG~~~----~l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g~~ 275 (368)
.+++++|+++..++++|.+. ++++|.++|++||+++|+|++|+ ++.. .++.....+|++ |++|.+|+.
T Consensus 209 ~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~~G 286 (433)
T 1z7d_A 209 KDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVI--LLGKALSGG 286 (433)
T ss_dssp TSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGTT
T ss_pred CCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEE--EECccccCC
Confidence 57789999998888899876 49999999999999999999997 3221 112223357876 667988742
Q ss_pred --cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 017640 276 --GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWI 353 (368)
Q Consensus 276 --G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~ 353 (368)
.+|++++++++++.+.+...+. . .+.|..+.+++.++++.+.+. .+.++..++.
T Consensus 287 ~~~~G~v~~~~~~~~~l~~~~~~~------------------t---~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~ 342 (433)
T 1z7d_A 287 HYPISAVLANDDIMLVIKPGEHGS------------------T---YGGNPLAASICVEALNVLINE---KLCENAEKLG 342 (433)
T ss_dssp SSCCEEEEECHHHHTTCCTTCCCC------------------T---TTTCHHHHHHHHHHHHHHHHT---THHHHHHHHH
T ss_pred CCCeEEEEECHHHHhhhccccccc------------------c---CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 2899999999887776532211 1 155677777788888887763 4667888888
Q ss_pred HHHHHHHHhh
Q 017640 354 ICSIIVIQER 363 (368)
Q Consensus 354 ~~l~~~l~~~ 363 (368)
+++.+.|.++
T Consensus 343 ~~l~~~L~~l 352 (433)
T 1z7d_A 343 GPFLENLKRE 352 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888888765
No 196
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.88 E-value=1.4e-20 Score=178.29 Aligned_cols=261 Identities=13% Similarity=0.015 Sum_probs=173.2
Q ss_pred CCeEEeccCCC------CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CCC----CCC--cE
Q 017640 66 KKLVYLDNAAT------SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NAS----DSG--EI 132 (368)
Q Consensus 66 ~~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~----~~~--~v 132 (368)
+++|+|..|.+ .++++.+.++.. .+...... + .|.. .....++|+++++++ +.. +++ ++
T Consensus 29 ~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~-~--~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~~i~i 100 (405)
T 3k7y_A 29 EEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKE-K--PYLL----GNGTEDFSTLTQNLIFGNNSKYIEDKKICT 100 (405)
T ss_dssp SSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCC-C--CCCT----TSSCHHHHHHHHHHHHCSSCTTTTTTCEEE
T ss_pred cCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCC-C--CCCC----CCCcHHHHHHHHHHHcCCCCccccccceEE
Confidence 56799998863 135778888876 33111111 0 1111 122337888888776 322 123 36
Q ss_pred EEeCCHHHHHHHHHHHccCCCCC--CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CC-CCCCCHHHHHHhccc-
Q 017640 133 VFTKNATEAINLVAYSWGLSNLK--SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-ND-DESPDLDKLKEMLSR- 207 (368)
Q Consensus 133 ~~t~g~t~a~~~~~~~~~~~~~~--~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~-~~~~d~~~l~~~l~~- 207 (368)
++|+|+++|+.+++.++ .. + |+|++++|.|+. +...++..|++++.+++ ++ ++.+|++.|++++++
T Consensus 101 ~~t~G~~~al~~~~~~l----~~~~~-d~Vlv~~P~y~~----~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~ 171 (405)
T 3k7y_A 101 IQCIGGTGAIFVLLEFL----KMLNV-ETLYVTNPPYIN----HVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNI 171 (405)
T ss_dssp EEEEHHHHHHHHHHHHH----HTTTC-CEEEEESSCCHH----HHHHHHTTTCEEEEECCEETTTTEECHHHHHHHHHHS
T ss_pred EEcCchHHHHHHHHHHH----HhcCC-CEEEEeCCCCHh----HHHHHHHcCCeEEEEeccccccCCcCHHHHHHHHHhC
Confidence 89999999999999887 44 8 999999997777 45556677999999998 33 478899999999864
Q ss_pred -CceEEEEccc-ccccccccC---HHHHHHHHHhcCCEEEEecCCcCCcc--------cc-cC-CCCCccEEEecCcCcC
Q 017640 208 -KTKLVVIHHI-SNMLASILP---IEEIVHWSHDVGAKVLVDACQSVPHM--------VV-DV-QGLDADFLVASSHKMC 272 (368)
Q Consensus 208 -~~~~v~~~~~-~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~~~--------~~-~~-~~~~~d~~~~s~~K~~ 272 (368)
++++++++.+ |||||.+++ +++|+++|++||+++|+|++|.--.. ++ .+ ......+++.|+||.|
T Consensus 172 ~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 251 (405)
T 3k7y_A 172 PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM 251 (405)
T ss_dssp CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS
T ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccC
Confidence 5578877655 899999999 67888999999999999999872111 01 11 1224568899999999
Q ss_pred CCCc--ceEEEE---cccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH------HHHhC
Q 017640 273 GPTG--IGFLFG---KSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY------LSTIG 341 (368)
Q Consensus 273 g~~G--~G~l~~---~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~------~~~~g 341 (368)
|.+| +||+++ ++++++.+....... .+.....++..+..++..+++. +.+ .
T Consensus 252 ~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~-----------------~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~-~ 313 (405)
T 3k7y_A 252 SLYGERAGALHIVCKNQEEKKIVFNNLCFI-----------------VRKFYSSPVIHTNRILCQLLNNQNLKLNWIK-E 313 (405)
T ss_dssp CCTTTTEEEEEEECSSHHHHHHHHHHHHHH-----------------HHTTTSSCCHHHHHHHHHHHHCHHHHHHHHH-H
T ss_pred CCccccceEEEEEeCCHHHHHHHHHHHHHH-----------------HhcccCCCcHHHHHHHHHHhCCHHHHHHHHH-H
Confidence 9888 999864 445544332111000 0001113455555555555542 111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017640 342 MQKIHAYEVKWIICSIIVIQ 361 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~ 361 (368)
+..++++.++.++++.+.|.
T Consensus 314 l~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 314 LSQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 56677778888889999888
No 197
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.88 E-value=2.6e-21 Score=186.23 Aligned_cols=272 Identities=10% Similarity=0.037 Sum_probs=180.3
Q ss_pred CeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|.. ..++.++.+.+++.+.+.... .+.. .....+...++++.++++++.+.+ +|++|+|+++
T Consensus 49 g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~--~~~~----~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~ggse 121 (449)
T 3a8u_X 49 GRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD--YSPG----FQYGHPLSFQLAEKITDLTPGNLN-HVFFTDSGSE 121 (449)
T ss_dssp CCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS--CCCS----SSCCCHHHHHHHHHHHTTSSTTEE-EEEEESSHHH
T ss_pred CCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC--Cccc----cccCCHHHHHHHHHHHHhCCCCCC-EEEEcCcHHH
Confidence 34577764 345568999999998876542 1110 001134456899999999986554 8999999999
Q ss_pred HHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHH------HcC---CEEEEEeCCCCC-----CCC-----
Q 017640 141 AINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQ------KTG---ANLKFLNLNDDE-----SPD----- 197 (368)
Q Consensus 141 a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~------~~g---~~v~~v~~~~~~-----~~d----- 197 (368)
|+..++.++.... -.+||+|++.++.|++.......... ..+ ..+..++.+..+ .+|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 9999998762100 01678999999999976533222210 000 134455543211 146
Q ss_pred ---HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
+++|+++++ +++++|+++..+|+||.+.| +++|.++|++||+++|+|++|+ ++.. .++.....+
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~ 281 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTP 281 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCC
Confidence 899999987 46788888887888999888 9999999999999999999994 6532 112222346
Q ss_pred cEEEecCcCcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLS 338 (368)
Q Consensus 262 d~~~~s~~K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~ 338 (368)
|++ |++|.+++ | +|++++++++++.+.+...+... ..+ ......+.+..+.+++.++++.+.
T Consensus 282 di~--s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~~~~--------~~~----~~~~t~~~~~~~~aa~~aal~~~~ 346 (449)
T 3a8u_X 282 DLM--CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTPEYA--------VEF----PHGYTYSAHPVACAAGLAALCLLQ 346 (449)
T ss_dssp SEE--EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSCTTS--------CSS----CCCCTTTTCHHHHHHHHHHHHHHH
T ss_pred CEE--EEcccccC-CCCceEEEEECHHHHHHhhccCccccc--------ccc----cccCCCcccHHHHHHHHHHHHHHH
Confidence 866 66698775 4 89999999887765532110000 000 001122457777888888888877
Q ss_pred HhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 339 TIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 339 ~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+. .+.++.+++.+++.+.|.++
T Consensus 347 ~~---~~~~~~~~~~~~l~~~L~~l 368 (449)
T 3a8u_X 347 KE---NLVQSVAEVAPHFEKALHGI 368 (449)
T ss_dssp HT---THHHHHHHHHHHHHHHHHTT
T ss_pred hc---CHHHHHHHHHHHHHHHHHHH
Confidence 63 46778888888888888764
No 198
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.87 E-value=1.5e-20 Score=180.49 Aligned_cols=253 Identities=11% Similarity=0.097 Sum_probs=179.6
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|..+ .++.++.+.+++.+.+...... ... + ..+...++++.+++++|. ++|++++|+++
T Consensus 75 g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~-~~~-~-----~~~~~~~l~~~la~~~g~---~~v~~~~sGse 144 (439)
T 2oat_A 75 GRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLT-SRA-F-----YNNVLGEYEEYITKLFNY---HKVLPMNTGVE 144 (439)
T ss_dssp CCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCC-CTT-S-----EESSHHHHHHHHHHHHTC---SEEEEESSHHH
T ss_pred CCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcc-cCc-c-----CCHHHHHHHHHHHHhcCC---CEEEEeCCHHH
Confidence 345777543 2347899999999988654211 100 1 123455788999999974 38999999999
Q ss_pred HHHHHHHHccC-----CCCCCC-CEEEEcCCCCcccHHHHHHHHHHcC------------CEEEEEeCCCCCCCCHHHHH
Q 017640 141 AINLVAYSWGL-----SNLKSG-DEVILTVAEHHSAIVPWQLVAQKTG------------ANLKFLNLNDDESPDLDKLK 202 (368)
Q Consensus 141 a~~~~~~~~~~-----~~~~~g-d~vl~~~~~~~s~~~~~~~~~~~~g------------~~v~~v~~~~~~~~d~~~l~ 202 (368)
|+..++.++.. ....+| +.|++.++.|++....... ..| .+++.++.+ |+++|+
T Consensus 145 A~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~---~~g~~~~~~~~~p~~~~v~~~~~~-----d~~~le 216 (439)
T 2oat_A 145 AGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAIS---SSTDPTSYDGFGPFMPGFDIIPYN-----DLPALE 216 (439)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHT---TCCCHHHHTTSCSCCTTEEEECSS-----CHHHHH
T ss_pred HHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhh---cCCChhcccCCCCCCCCeEEeCCC-----CHHHHH
Confidence 99999987621 002356 8999999999876533322 222 456777764 899999
Q ss_pred Hhcc-cCceEEEEccccccccccc----CHHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcC
Q 017640 203 EMLS-RKTKLVVIHHISNMLASIL----PIEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMC 272 (368)
Q Consensus 203 ~~l~-~~~~~v~~~~~~n~tG~~~----~l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~ 272 (368)
++++ +++++|+++..++++|.+. ++++|.++|++||+++|+|++|. ++.. .++.....+|++ |++|.+
T Consensus 217 ~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l 294 (439)
T 2oat_A 217 RALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKAL 294 (439)
T ss_dssp HHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGG
T ss_pred HHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--Eecccc
Confidence 9994 6788999988888899876 49999999999999999999995 3221 112223357876 677977
Q ss_pred CCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Q 017640 273 GPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEV 350 (368)
Q Consensus 273 g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~ 350 (368)
|+. .+|++++++++++.+.+...+. .| +.|..+.+++.++++.+.+. .+.++.+
T Consensus 295 ~~G~~~~G~v~~~~~~~~~l~~~~~~~------------------t~---~~~~~~~aaa~aal~~~~~~---~~~~~~~ 350 (439)
T 2oat_A 295 SGGLYPVSAVLCDDDIMLTIKPGEHGS------------------TY---GGNPLGCRVAIAALEVLEEE---NLAENAD 350 (439)
T ss_dssp GTTSSCCEEEEECHHHHTTSCTTSSCC------------------SS---TTCHHHHHHHHHHHHHHHHT---THHHHHH
T ss_pred cCCCCCeEEEEECHHHHhccCCCCccc------------------CC---CcCHHHHHHHHHHHHHHhhh---hHHHHHH
Confidence 752 2899999999887776532211 11 45677777788888887763 5678888
Q ss_pred HHHHHHHHHHHhh
Q 017640 351 KWIICSIIVIQER 363 (368)
Q Consensus 351 ~l~~~l~~~l~~~ 363 (368)
++.+++.+.|.++
T Consensus 351 ~~~~~l~~~L~~l 363 (439)
T 2oat_A 351 KLGIILRNELMKL 363 (439)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988765
No 199
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.87 E-value=7.7e-21 Score=183.21 Aligned_cols=252 Identities=17% Similarity=0.142 Sum_probs=171.4
Q ss_pred CeEEeccCCCC---CCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHH
Q 017640 67 KLVYLDNAATS---QKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAIN 143 (368)
Q Consensus 67 ~~i~l~~~~~~---~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~ 143 (368)
+..|+|..+.. ++++.+.+++.. ... .+. ......++|++++++++.+ ++++|+|+++|+.
T Consensus 41 ~~~ylD~~~~~~~~~~~~~~~~a~~~------~~~---~y~----~~~~~~~l~~~la~~~~~~---~~~~~~~gt~a~~ 104 (456)
T 2ez2_A 41 KDIYIDLLTDSGTNAMSDKQWAGMMM------GDE---AYA----GSENFYHLERTVQELFGFK---HIVPTHQGRGAEN 104 (456)
T ss_dssp GGCSEECSCSSSCCCCCHHHHHHHTT------CCC---CSS----SCHHHHHHHHHHHHHHCCS---EEEEESSHHHHHH
T ss_pred ccceeeeccccCCccCCHHHHHHhhc------chh---hcc----cChhHHHHHHHHHHHhCCC---cEEEeCCcHHHHH
Confidence 44577775432 556777776641 110 111 1344568999999999975 7999999999999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC----------CCCCCHHHHHHhcccCc----
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----------DESPDLDKLKEMLSRKT---- 209 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~----------~~~~d~~~l~~~l~~~~---- 209 (368)
.++.++ +++|| ++++++|++.+ ...++..|++++.+++++ ++.+|+++|++++++++
T Consensus 105 ~al~~l----~~~gd--i~~~~~~~~~~---~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~ 175 (456)
T 2ez2_A 105 LLSQLA----IKPGQ--YVAGNMYFTTT---RYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENI 175 (456)
T ss_dssp HHHHHH----CCTTC--EEEESSCCHHH---HHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGE
T ss_pred HHHHHh----CCCCC--Eeccccccchh---HHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccce
Confidence 999998 78999 77888884432 334456799999998863 26789999999997665
Q ss_pred eEEEEccccc-ccccccC---HHHHHHHHHhcCCEEEEecCCcCC---------cccccCC--------CCCccEEEecC
Q 017640 210 KLVVIHHISN-MLASILP---IEEIVHWSHDVGAKVLVDACQSVP---------HMVVDVQ--------GLDADFLVASS 268 (368)
Q Consensus 210 ~~v~~~~~~n-~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~~---------~~~~~~~--------~~~~d~~~~s~ 268 (368)
++|++++++| |||.++| +++|.++|++||+++|+|++|+.| ....... ....|+++.|+
T Consensus 176 ~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~ 255 (456)
T 2ez2_A 176 AYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMSG 255 (456)
T ss_dssp EEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEET
T ss_pred eEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEeC
Confidence 8999999998 9999998 999999999999999999999864 1110111 12368888888
Q ss_pred cCcCCCCcceEEEE-cccccccCCCcccC-CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 269 HKMCGPTGIGFLFG-KSDLLSAMPPFLGG-GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 269 ~K~~g~~G~G~l~~-~~~li~~l~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+|+++++.+|+++. ++++++.+...... .+. . ..+..+...+.++ ++...+... +...
T Consensus 256 kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~~~~~~a~--a~~~~~~~~-~~~~ 315 (456)
T 2ez2_A 256 KKDCLVNIGGFLCMNDDEMFSSAKELVVVYEGM----------------P-SYGGLAGRDMEAM--AIGLREAMQ-YEYI 315 (456)
T ss_dssp TTTTCCSSCEEEEESCHHHHHHHHHHHHHHTCC----------------T-TTTTCCHHHHHHH--HHHHHHHTC-HHHH
T ss_pred cccCCCCceeEEEECCHHHHHHHHHHHhhccCc----------------c-cccCcchhHHHHH--HHHHHHHhH-HHHH
Confidence 88766433799988 56777665432210 000 0 0112233333331 233333322 4566
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++..++.+++.+.|.+.
T Consensus 316 ~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 316 EHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 77778888888888774
No 200
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.86 E-value=1.9e-20 Score=179.68 Aligned_cols=259 Identities=13% Similarity=0.062 Sum_probs=173.4
Q ss_pred EEeccCCC------CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 69 VYLDNAAT------SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 69 i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
-|+|..+. ++.++.+.+++.+.+....... ......+...++++.++++++...+++++||+|+++|+
T Consensus 44 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~------~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~ 117 (439)
T 3dxv_A 44 ELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGAT------ILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDAN 117 (439)
T ss_dssp EEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSC------SSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHH
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc------ccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHH
Confidence 46666543 2378999999999887642111 01112456678999999999765424999999999999
Q ss_pred HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC--C---------EEEEEeCCCCCCC-----CHHHHHHhc-
Q 017640 143 NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG--A---------NLKFLNLNDDESP-----DLDKLKEML- 205 (368)
Q Consensus 143 ~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g--~---------~v~~v~~~~~~~~-----d~~~l~~~l- 205 (368)
..++..+. ...+++.|++.++.|++.......+..... . .+..++.+..+.. |+++|++++
T Consensus 118 ~~al~~~~--~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 195 (439)
T 3dxv_A 118 EAAYRAIV--KATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKLA 195 (439)
T ss_dssp HHHHHHHH--HHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHHH
Confidence 99998741 023567888888888876543322211000 0 1123333322222 689999999
Q ss_pred ---ccCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCc----ccccCCCCCccEEEecCcCcCC
Q 017640 206 ---SRKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPH----MVVDVQGLDADFLVASSHKMCG 273 (368)
Q Consensus 206 ---~~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~----~~~~~~~~~~d~~~~s~~K~~g 273 (368)
.+++++|+++.++|++|.+.| +++|.++|++||+++|+|++|+ ++. ...+.....+|++ |++|.+|
T Consensus 196 ~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~ 273 (439)
T 3dxv_A 196 AVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLG 273 (439)
T ss_dssp TSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGG
T ss_pred hcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhc
Confidence 457899999999999999999 9999999999999999999997 321 1223333457776 7779877
Q ss_pred CCc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Q 017640 274 PTG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVK 351 (368)
Q Consensus 274 ~~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~ 351 (368)
+ | +|++++++++++.+.+...+ ... .+..+..++.++++.+.+ +.+.++.++
T Consensus 274 ~-G~riG~~~~~~~~~~~~~~~~~~---------------------~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~ 327 (439)
T 3dxv_A 274 G-GLPLSAVIAPAEILDCASAFAMQ---------------------TLH-GNPISAAAGLAVLETIDR---DDLPAMAER 327 (439)
T ss_dssp T-TSCCEEEEEEHHHHTSCSSSSCC---------------------TTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHH
T ss_pred C-CcceEEEEECHHHHhhhcCCCcC---------------------CCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHH
Confidence 4 5 89999999998877654211 112 456666777777777665 344566666
Q ss_pred HHHHHHHHHHhh
Q 017640 352 WIICSIIVIQER 363 (368)
Q Consensus 352 l~~~l~~~l~~~ 363 (368)
+.+++.+.|.++
T Consensus 328 ~~~~~~~~l~~~ 339 (439)
T 3dxv_A 328 KGRLLRDGLSEL 339 (439)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666553
No 201
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.86 E-value=1.7e-21 Score=188.28 Aligned_cols=254 Identities=15% Similarity=0.101 Sum_probs=167.9
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
+..|+|....... +.+.+++.+.+... .. .+. ......+++++++++++.+ +|++|+|+|+|+..++
T Consensus 42 g~~ylD~~~~~~~-~~v~~a~~~~~~~~--~~---~y~----~~~~~~~l~~~la~~~~~~---~v~~t~ggt~A~~~al 108 (467)
T 1ax4_A 42 SAVYIDLLTDSGT-NAMSDHQWAAMITG--DE---AYA----GSRNYYDLKDKAKELFNYD---YIIPAHQGRGAENILF 108 (467)
T ss_dssp GGCSEECSCSSSC-CCEEHHHHHHHHTC--CC---CSS----SCHHHHHHHHHHHHHHCCC---EEEEESSHHHHHHHHH
T ss_pred CceeeecccCcCC-HHHHHHHHHHHhhc--cc---ccc----cCccHHHHHHHHHHHcCCC---cEEEcCCcHHHHHHHH
Confidence 3457887554433 56666666655421 10 111 1234558899999999873 8999999999999999
Q ss_pred HHccCCCCC----CCCE---EEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCC----------CCCCCHHHHHHhccc--
Q 017640 147 YSWGLSNLK----SGDE---VILTVAEHHSAIVPWQLVAQKTGANLKFLNLND----------DESPDLDKLKEMLSR-- 207 (368)
Q Consensus 147 ~~~~~~~~~----~gd~---vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~----------~~~~d~~~l~~~l~~-- 207 (368)
.++ .+ +||+ |+++ ..|+.. +.......|.+++.++... ++.+|+++|++++++
T Consensus 109 ~~~----~~~~~~~Gd~~~~viv~-~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~ 180 (467)
T 1ax4_A 109 PVL----LKYKQKEGKAKNPVFIS-NFHFDT---TAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG 180 (467)
T ss_dssp HHH----HHHHHHTTCCSSCEEEE-SSCCHH---HHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred HHH----HHhhccCCCccceEEEe-ccccch---hhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcC
Confidence 988 66 8998 8888 444332 3334455688888776431 457899999999974
Q ss_pred --CceEEEEccccccc-ccccC---HHHHHHHHHhcCCEEEEecCCcC-----------CcccccCCC------CCccEE
Q 017640 208 --KTKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSV-----------PHMVVDVQG------LDADFL 264 (368)
Q Consensus 208 --~~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~-----------~~~~~~~~~------~~~d~~ 264 (368)
++++|++++++||+ |.++| +++|.++|++||+++|+|+++.. +....++.. ...|++
T Consensus 181 ~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 260 (467)
T 1ax4_A 181 ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADAL 260 (467)
T ss_dssp GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEE
T ss_pred CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceE
Confidence 68999999999999 88877 67999999999999999998765 222222111 236889
Q ss_pred EecCcCcCCCCcceEEEEc-c-cccccCCCccc--CCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 265 VASSHKMCGPTGIGFLFGK-S-DLLSAMPPFLG--GGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 265 ~~s~~K~~g~~G~G~l~~~-~-~li~~l~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
++|+||.+|++-.|+++.+ + ++++.+..... ++. ...++.+...+.++..+++...+
T Consensus 261 ~~s~sK~~g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~------------------~~~~~~~~~~~~a~~~~l~~~~~- 321 (467)
T 1ax4_A 261 TMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGF------------------VTYGGLAGRDMAAMVQGLEEGTE- 321 (467)
T ss_dssp EEETTSTTCCSSCEEEEESSCHHHHHHHHHHHHHHTCS------------------TTTTTCCHHHHHHHHHHHHHTTC-
T ss_pred EEeccccCCCCcceEEEeCCHHHHHHHHHhhccccccc------------------cccCCccchHHHHHHHHHHHhhh-
Confidence 9999999887622777777 6 67665543211 111 12235555555555545543221
Q ss_pred CHHHHHHHHHHHHHHHHHHHHh
Q 017640 341 GMQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~ 362 (368)
.+.+ ++..++.+++.+.|.+
T Consensus 322 -~~~~-~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 322 -EEYL-HYRIGQVKYLGDRLRE 341 (467)
T ss_dssp -HHHH-HHHHHHHHHHHHHHHH
T ss_pred -hhHH-HHHHHHHHHHHHHHHh
Confidence 1222 3334666777777766
No 202
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.85 E-value=9.6e-21 Score=186.19 Aligned_cols=210 Identities=15% Similarity=0.092 Sum_probs=148.9
Q ss_pred eEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-----C--CC--CCCcEEEeCCH
Q 017640 68 LVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-----N--AS--DSGEIVFTKNA 138 (368)
Q Consensus 68 ~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-----~--~~--~~~~v~~t~g~ 138 (368)
.+.|..+..+..++.+.+++.+.+.. ..++..... . .+|+++++.+ + .. ++++|++|+|+
T Consensus 106 ~i~l~~g~~~~~~~~~~~al~~~~~~-~~Y~~~~g~------~----~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~ 174 (546)
T 2zy4_A 106 SLSYVRDQLGLDPAAFLHEMVDGILG-CNYPVPPRM------L----NISEKIVRQYIIREMGADAIPSESVNLFAVEGG 174 (546)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHHHT-CSCCSSSSC------C----HHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHH
T ss_pred hhecccCCCCCCChHHHHHHHHhhhc-CCCCCCcCC------H----HHHHHHHHHHHHHhccCCCCCCCcceEEEECCH
Confidence 56666666676677777777766532 222221111 1 3454444433 2 21 23599999999
Q ss_pred HHHHHHHHHHcc-CCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCC--CCCCHHHHHHhcccCceEEEEc
Q 017640 139 TEAINLVAYSWG-LSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDD--ESPDLDKLKEMLSRKTKLVVIH 215 (368)
Q Consensus 139 t~a~~~~~~~~~-~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~--~~~d~~~l~~~l~~~~~~v~~~ 215 (368)
++++..++.++. +..+++||.|++.+|.|++...... ....|++++.++.+++ +.+|+++|++.+.+++++|+++
T Consensus 175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~ 252 (546)
T 2zy4_A 175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPE--LAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCV 252 (546)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHH--STTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEE
T ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHH--HcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEE
Confidence 999999998731 1116899999999998887543211 1234789999998744 5689999999888889999999
Q ss_pred ccccccccccC---HHHHHHHH--HhcCCEEEEecCCcCCcc-cccCC--CCCccEEEecCcCcCCCCc--ceEEEEccc
Q 017640 216 HISNMLASILP---IEEIVHWS--HDVGAKVLVDACQSVPHM-VVDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSD 285 (368)
Q Consensus 216 ~~~n~tG~~~~---l~~i~~l~--~~~g~~li~D~a~~~~~~-~~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~~~ 285 (368)
+++||||.+++ +++|.++| +++|++||+|++|+.... ...+. ..+.++++.|+||.+|.+| +||++++++
T Consensus 253 ~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 332 (546)
T 2zy4_A 253 NPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQ 332 (546)
T ss_dssp SSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESS
T ss_pred CCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCH
Confidence 99999999999 66788888 789999999999983321 11111 1246899999999999888 899999886
Q ss_pred -ccccC
Q 017640 286 -LLSAM 290 (368)
Q Consensus 286 -li~~l 290 (368)
+++.+
T Consensus 333 ~l~~~l 338 (546)
T 2zy4_A 333 NVFDLA 338 (546)
T ss_dssp CHHHHH
T ss_pred HHHHHH
Confidence 66554
No 203
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=2.9e-20 Score=178.14 Aligned_cols=256 Identities=17% Similarity=0.137 Sum_probs=171.1
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+.+.....+ + + ..+...+++++++++++ .. ++|+|++|+++
T Consensus 54 g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~-~-----~~~~~~~l~~~la~~~~-~~-~~v~~~~sGse 122 (434)
T 3l44_A 54 GNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLY---G-T-----PTALEVKFAKMLKEAMP-AL-DKVRFVNSGTE 122 (434)
T ss_dssp CCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSCC---S-S-----CCHHHHHHHHHHHHHCT-TC-SEEEEESSHHH
T ss_pred CCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcCC---C-C-----CCHHHHHHHHHHHHhCC-CC-CEEEEeCchHH
Confidence 345777653 3356999999999988763211 1 1 12445578899999997 33 49999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----------------cCCEEEEEeCCCCCCCCHHHHHHh
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----------------TGANLKFLNLNDDESPDLDKLKEM 204 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----------------~g~~v~~v~~~~~~~~d~~~l~~~ 204 (368)
|+..++..+.. ..+++.|++.++.|++........... ...++..+|.+ |+++|+++
T Consensus 123 a~~~ai~~a~~--~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~ 195 (434)
T 3l44_A 123 AVMTTIRVARA--YTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFN-----NVETLKEA 195 (434)
T ss_dssp HHHHHHHHHHH--HHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTT-----CHHHHHHH
T ss_pred HHHHHHHHHHH--hhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcc-----cHHHHHHH
Confidence 99999987621 136789999999998754321111000 00123334433 89999998
Q ss_pred cc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcC---Ccc-cccCCCCCccEEEecCcCcCC
Q 017640 205 LS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSV---PHM-VVDVQGLDADFLVASSHKMCG 273 (368)
Q Consensus 205 l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~---~~~-~~~~~~~~~d~~~~s~~K~~g 273 (368)
++ +++++|+++.+++++|.+.| +++|.++|++||+++|+||+|.- |.. ..+.....+|++ +++|.+|
T Consensus 196 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~ 273 (434)
T 3l44_A 196 LDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLT--ALGKVIG 273 (434)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEE--EEEGGGG
T ss_pred HHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCee--ehhhhhc
Confidence 87 46788888888888999887 99999999999999999999972 211 111122346765 4569776
Q ss_pred C-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 274 P-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 274 ~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
+ -.+|++++++++++.+.+.... ......+.+..+.+++.++++.+.+ +.+.++..++
T Consensus 274 ~G~~iG~~~~~~~i~~~~~~~~~~------------------~~~~t~~~~~~a~aaa~aal~~~~~---~~~~~~~~~~ 332 (434)
T 3l44_A 274 GGLPIGAYGGKKEIMEQVAPLGPA------------------YQAGTMAGNPASMASGIACLEVLQQ---EGLYEKLDEL 332 (434)
T ss_dssp TTSSCEEEEECHHHHTTBTTTSSB------------------CCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHH
T ss_pred CCcCeeeEEEcHHHHHhhccCCCc------------------ccCCCCCcCHHHHHHHHHHHHHHHc---ccHHHHHHHH
Confidence 2 2399999999998877642100 0111225677777777788887654 4455666666
Q ss_pred HHHHHHHHHhh
Q 017640 353 IICSIIVIQER 363 (368)
Q Consensus 353 ~~~l~~~l~~~ 363 (368)
.+++.+.|.++
T Consensus 333 ~~~l~~~L~~~ 343 (434)
T 3l44_A 333 GATLEKGILEQ 343 (434)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 67776666653
No 204
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.85 E-value=8.9e-21 Score=189.54 Aligned_cols=221 Identities=11% Similarity=0.070 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC
Q 017640 112 EYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 112 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 191 (368)
.+.++++.+|+++|++. .+++++|++.|+..++.++ +++||.|++..++|.|+... +...|+++++++.+
T Consensus 196 ~i~eaE~~lA~~fGa~~--a~~v~nGts~An~~ai~al----~~pGD~VLv~r~~H~S~~~~----l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 196 PHKEAEQYIARVFNADR--SYMVTNGTSTANKIVGMYS----APAGSTILIDRNCHKSLTHL----MMMSDVTPIYFRPT 265 (715)
T ss_dssp HHHHHHHHHHHHHTCSE--EEEESSHHHHHHHHHHHHH----CCTTCEEEEESSCCHHHHHH----HHHSCCEEEEECCC
T ss_pred HHHHHHHHHHHHhCCCC--ceEECcHHHHHHHHHHHHh----CCCCCEEEECCCccHHHHHH----HHHcCCEEEEEecc
Confidence 47789999999999973 5667778789999999998 89999999999999997654 45679999999876
Q ss_pred CC-C----CC-----CHHHHHHhccc--Cce---EEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc--cc
Q 017640 192 DD-E----SP-----DLDKLKEMLSR--KTK---LVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM--VV 254 (368)
Q Consensus 192 ~~-~----~~-----d~~~l~~~l~~--~~~---~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~--~~ 254 (368)
.+ + .+ |++.|++++++ +++ +++++++ |++|.++|+++|.++|++++ +++|++|+.+.. +.
T Consensus 266 ~~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~ 342 (715)
T 3n75_A 266 RNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (715)
T ss_dssp BCTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGG
T ss_pred ccccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCc
Confidence 43 2 23 89999999974 334 8899999 99999999999999998774 799999986531 11
Q ss_pred --cCCCC----CccEE---EecCcCcCC-CCcceEEEEcccccc-cCCCcccCCcceeecccCCCCCCCCCCCCCCCCCC
Q 017640 255 --DVQGL----DADFL---VASSHKMCG-PTGIGFLFGKSDLLS-AMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPA 323 (368)
Q Consensus 255 --~~~~~----~~d~~---~~s~~K~~g-~~G~G~l~~~~~li~-~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~ 323 (368)
+.... +.|++ +.|+||.++ +.+.|++++++++.. .+.... ..+.+++++
T Consensus 343 ~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~--------------------~~~~STSps 402 (715)
T 3n75_A 343 YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAY--------------------MMHTTTSPH 402 (715)
T ss_dssp GTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHH--------------------HHTSCSSCC
T ss_pred cccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHH--------------------HhhcCCCch
Confidence 11111 25665 899999665 557899999876311 111110 123467899
Q ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhcC
Q 017640 324 IGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERHN 365 (368)
Q Consensus 324 ~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~g 365 (368)
++.++++.++++++.....+.+.++..+++.++++.|.++++
T Consensus 403 y~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~ 444 (715)
T 3n75_A 403 YGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRT 444 (715)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999987522355789999999999999988753
No 205
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.85 E-value=1.9e-20 Score=179.07 Aligned_cols=265 Identities=14% Similarity=0.060 Sum_probs=164.8
Q ss_pred eEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
.-|+|..+ .|+.++.+.+++.+.+........ .....+...+++++++++++.+.+ +|++|+|+++|
T Consensus 29 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~------~~~~~~~~~~l~~~la~~~~~~~~-~v~~~~gg~ea 101 (430)
T 3i4j_A 29 RRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHG------SQFSSDVLEEYAGRLARFVGLPTF-RFWAVSGGSEA 101 (430)
T ss_dssp CEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCT------TTCEEHHHHHHHHHHHHHTTCTTC-EEEEESSHHHH
T ss_pred CEEEECCCchhccccCCCCHHHHHHHHHHHHhcccccc------cccCCHHHHHHHHHHHHhCCCCCC-EEEEeCcHHHH
Confidence 34666653 334589999999998876421111 011234566889999999987665 99999999999
Q ss_pred HHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHHHcCC-----------EEEEEeCCCC---CCCCHHHHHH
Q 017640 142 INLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQKTGA-----------NLKFLNLNDD---ESPDLDKLKE 203 (368)
Q Consensus 142 ~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-----------~v~~v~~~~~---~~~d~~~l~~ 203 (368)
+..++.++... .-.+++.|++.++.|++.............. .+..++.+.. +..|+++|++
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 181 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA 181 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence 99999876210 0045789999999998865433222111000 2233333222 2235688888
Q ss_pred hcc----cCceEEEEccccc-ccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCC-CCCccEEEecC
Q 017640 204 MLS----RKTKLVVIHHISN-MLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQ-GLDADFLVASS 268 (368)
Q Consensus 204 ~l~----~~~~~v~~~~~~n-~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~-~~~~d~~~~s~ 268 (368)
+++ +++++|+++.+++ ++|.+.+ +++|.++|++||+++|+||+|+ ++.. ..+.. ...+|+++ +
T Consensus 182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t--~ 259 (430)
T 3i4j_A 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAV--L 259 (430)
T ss_dssp HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEE--E
T ss_pred HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEE--E
Confidence 886 4567888888888 9998877 9999999999999999999987 4322 12222 33467665 5
Q ss_pred cCcCCCCc---ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 269 HKMCGPTG---IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 269 ~K~~g~~G---~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
+|.+++ | +|++++++++++.+.+.... . ......+.+..+.+++.++++.+.+. .+
T Consensus 260 sK~l~~-G~~r~G~~~~~~~i~~~~~~~~~~--~---------------~~~~t~~~~~~~~aaa~aal~~~~~~---~~ 318 (430)
T 3i4j_A 260 GKGLAA-GYAPLAGLLAAPQVYETVMGGSGA--F---------------MHGFTYAGHPVSVAAGLSVLDIVERE---DL 318 (430)
T ss_dssp CGGGTT-TSSCCEEEEECHHHHHHHHHTTCB--C---------------CCCCTTTTCHHHHHHHHHHHHHHHHT---TH
T ss_pred cccccC-CccccEEEEECHHHHHHHhccCCc--c---------------cccCCCCCCHHHHHHHHHHHHHHHcc---cH
Confidence 698775 4 79999999988776532100 0 00111256777777888888877653 34
Q ss_pred HHHHHHHHHHHHHHHHh
Q 017640 346 HAYEVKWIICSIIVIQE 362 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~ 362 (368)
.++.+++.+++.+.|.+
T Consensus 319 ~~~~~~~~~~~~~~l~~ 335 (430)
T 3i4j_A 319 TGAAKERGAQLLAGLQA 335 (430)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44555555555555543
No 206
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.85 E-value=2.1e-20 Score=179.02 Aligned_cols=263 Identities=9% Similarity=-0.014 Sum_probs=175.3
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+..|+|... .++.++.+.+++.+.+.... +...+ + ..+...++++.++++++.+. ++|++|+|+++
T Consensus 42 g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~-~~~~~-~-----~~~~~~~l~~~la~~~~~~~-~~v~~~~gg~e 113 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD-HLFSE-M-----LSRPVVDLATRLANITPPGL-DRALLLSTGAE 113 (433)
T ss_dssp CCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCC-CCCTT-C-----CCHHHHHHHHHHHHHSCTTC-CEEEEESCHHH
T ss_pred CCEEEEcccchhccccCCCCHHHHHHHHHHHHhCc-ccccc-c-----CCHHHHHHHHHHHHhCCCCc-CEEEEeCchHH
Confidence 345677632 34568999999999887642 11111 1 12445688899999998765 49999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHH-----Hc---CCEEEEEeCCCC----C--------CCCHHH
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQ-----KT---GANLKFLNLNDD----E--------SPDLDK 200 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~-----~~---g~~v~~v~~~~~----~--------~~d~~~ 200 (368)
|+..++..+.. ...++.|++.+|.|++.......... .. ...++.++.+.. + .+|+++
T Consensus 114 a~~~a~~~~~~--~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~ 191 (433)
T 1zod_A 114 SNEAAIRMAKL--VTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDY 191 (433)
T ss_dssp HHHHHHHHHHH--HHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHH
T ss_pred HHHHHHHHHHH--hhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHH
Confidence 99999986510 13467999999999876543222110 00 113444544321 1 236899
Q ss_pred HHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCccEEEec
Q 017640 201 LKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDADFLVAS 267 (368)
Q Consensus 201 l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~d~~~~s 267 (368)
|+++++ +++++|+++..+|+||.+.+ +++|.++|++||+++|+|++|+ ++... ++.....+|++ |
T Consensus 192 le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~--s 269 (433)
T 1zod_A 192 AFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDIL--T 269 (433)
T ss_dssp HHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--E
T ss_pred HHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEE--E
Confidence 999987 46778888777789998766 9999999999999999999998 54321 12122346665 6
Q ss_pred CcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 268 SHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 268 ~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
++|.+|+ -++|++++++++++.+.+... .+....+.|..+.+++.++++.+.+. .+.
T Consensus 270 ~sK~~~~G~~ig~~~~~~~~~~~~~~~~~-------------------~~~~t~~~~~~~~~a~~aal~~~~~~---~~~ 327 (433)
T 1zod_A 270 LSKTLGAGLPLAAIVTSAAIEERAHELGY-------------------LFYTTHVSDPLPAAVGLRVLDVVQRD---GLV 327 (433)
T ss_dssp ECHHHHTTSSCEEEEECHHHHHHHHHTTC-------------------CCCCTTTTCHHHHHHHHHHHHHHHHT---THH
T ss_pred ecccccCCCCeeEEEEhHHHHHhhccCCC-------------------CCCCCCCcCHHHHHHHHHHHHHHHhC---CHH
Confidence 6797765 238999999988776653110 00011245777888888889887763 346
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++.+++.+++.+.|+++
T Consensus 328 ~~~~~~~~~l~~~l~~l 344 (433)
T 1zod_A 328 ARANVMGDRLRRGLLDL 344 (433)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777777777777654
No 207
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.85 E-value=6.4e-20 Score=176.73 Aligned_cols=246 Identities=13% Similarity=0.038 Sum_probs=157.9
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
++.++.+.+++.+.+.... +.+. ..+...++.+.+++.++ .. ++|++++|+++|+..++.+.. .+.+
T Consensus 72 g~~~~~v~~a~~~~~~~~~---~~~~------~~~~~~~la~~l~~~~~-~~-~~v~~~~gg~eA~~~al~~ar--~~~~ 138 (453)
T 2cy8_A 72 GHGHPRVNAAIAEALSHGV---QYAA------SHPLEVRWAERIVAAFP-SI-RKLRFTGSGTETTLLALRVAR--AFTG 138 (453)
T ss_dssp CBTCHHHHHHHHHHHTTTC---SSCS------SCHHHHHHHHHHHHHCT-TC-SEEEEESCHHHHHHHHHHHHH--HHHC
T ss_pred CCCCHHHHHHHHHHHHhCC---CCCC------CCHHHHHHHHHHHhhCC-CC-CEEEEeCCHHHHHHHHHHHHH--HhhC
Confidence 4578999999998886521 1111 24555678888888876 33 489999999999999998721 0124
Q ss_pred CCEEEEcCCCCcccHHHHHHHHH-------HcCC------EEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEcccccc
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQ-------KTGA------NLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISNM 220 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~-------~~g~------~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n~ 220 (368)
++.|++.++.|++.......... ..|+ ++..++.. |+++|+++++ +++++|+++..+|+
T Consensus 139 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~ 213 (453)
T 2cy8_A 139 RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPD-----DIEGMREVFANHGSDIAAFIAEPVGSH 213 (453)
T ss_dssp CCEEEEECC----------------------------CGGGEEEECTT-----CHHHHHHHHHHHGGGEEEEEECSSEHH
T ss_pred CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCC-----CHHHHHHHHHhcCCCEEEEEECCCCCC
Confidence 56888888988875543322110 0132 23444432 8999999987 46788888888888
Q ss_pred cccccC----HHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcCCC-CcceEEEEcccccccC
Q 017640 221 LASILP----IEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMCGP-TGIGFLFGKSDLLSAM 290 (368)
Q Consensus 221 tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~g~-~G~G~l~~~~~li~~l 290 (368)
||.+.| +++|.++|++||+++|+|++|+ +.. .++.....+|++ |++|.+|+ ..+|++++++++++.+
T Consensus 214 tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~v~~~~~~~~~l 290 (453)
T 2cy8_A 214 FGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKASAGGLPGGILGGREDVMGVL 290 (453)
T ss_dssp HHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGGGTTSSCEEEEECHHHHTTS
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhhhCCcceEEEechHHHHHHh
Confidence 999887 9999999999999999999998 321 111112346765 67797764 2389999999988877
Q ss_pred CCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 291 PPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY-LSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 291 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~-~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.+...+.. ......+.|..+.+++.++++. + . +.+.++.+++.+++.+.|.++
T Consensus 291 ~~~~~~~~----------------~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~~L~~~ 344 (453)
T 2cy8_A 291 SRGSDRKV----------------LHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFAREAMNHL 344 (453)
T ss_dssp SSCC-------------------------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCc----------------eeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHHHHHHH
Confidence 65211100 0111225677777777788887 5 3 345677788888888877654
No 208
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.84 E-value=6.1e-21 Score=177.96 Aligned_cols=192 Identities=16% Similarity=0.161 Sum_probs=138.4
Q ss_pred CcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC
Q 017640 79 KPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD 158 (368)
Q Consensus 79 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd 158 (368)
+++.+.+++.+.+. . ..+ ...+...++++++++++|.+. .++++|+++++..++.++ ..+||
T Consensus 27 ~~p~v~~ai~~~~~----~---~~~----~~~~~~~~l~~~la~~~~~~~---~i~~~~g~~a~~~a~~~~----~~~g~ 88 (359)
T 3pj0_A 27 VLTEALQNIDDNLE----S---DIY----GNGAVIEDFETKIAKILGKQS---AVFFPSGTMAQQIALRIW----ADRKE 88 (359)
T ss_dssp HHHHHTTTSCTTCB----C---CBT----TBSHHHHHHHHHHHHHHTCSE---EEEESCHHHHHHHHHHHH----HHHHT
T ss_pred CCHHHHHHHHhhcc----c---Ccc----cCCHHHHHHHHHHHHHhCCCc---EEEeCCHHHHHHHHHHHH----HhcCC
Confidence 46777777766221 1 111 113456689999999999863 366688899999999988 66777
Q ss_pred E--EEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccccc-ccccCHH---HHHH
Q 017640 159 E--VILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNML-ASILPIE---EIVH 232 (368)
Q Consensus 159 ~--vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t-G~~~~l~---~i~~ 232 (368)
. |++..+.|.+.+. ....+...|++++.++. +++.+|+++|+++ .+++++|++++++||+ |.++|.+ +|.+
T Consensus 89 ~~vvi~~~~~~~~~~~-~~~~~~~~g~~~~~v~~-~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~ 165 (359)
T 3pj0_A 89 NRRVAYHPLSHLEIHE-QDGLKELQQITPLLLGT-ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISE 165 (359)
T ss_dssp CCEEEECTTCHHHHSS-TTHHHHHHCCEEEECSC-TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHH
T ss_pred CcEEEEeccceeeehh-cchHHHhcCceEEecCC-cCCCcCHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHH
Confidence 6 5555554443221 11222345999999987 5688899999998 7789999999999998 7998855 4599
Q ss_pred HHHhcCCEEEEecCCcCCcc------cccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCC
Q 017640 233 WSHDVGAKVLVDACQSVPHM------VVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 233 l~~~~g~~li~D~a~~~~~~------~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~ 292 (368)
+|++||+++|+|++|..+.. ..++. .+.|+++.|+||.+++++.|+++.++++++.++.
T Consensus 166 ~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-~~~d~~~~s~sK~~~~~~gg~~~~~~~l~~~~~~ 230 (359)
T 3pj0_A 166 YCHEQGISLHLDGARLWEITPFYQKSAEEIC-ALFDSVYVSFYKGIGGIAGAILAGNDDFVQEAKI 230 (359)
T ss_dssp HHHHHTCEEEEEETTCGGGHHHHTCCHHHHH-TTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHH
T ss_pred HHHHcCCEEEEECcchhcchhhhCCCHHHhh-ccCCEEEEeccccCCCcceEEEECCHHHHHHHHH
Confidence 99999999999999875432 11111 3578999999997664444888899988877653
No 209
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.84 E-value=3.4e-20 Score=178.51 Aligned_cols=265 Identities=8% Similarity=-0.030 Sum_probs=176.7
Q ss_pred CeEEeccC------CCCCCcHHHH-H-HHHH---HHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEe
Q 017640 67 KLVYLDNA------ATSQKPIAVL-K-ALQN---YYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFT 135 (368)
Q Consensus 67 ~~i~l~~~------~~~~~~~~v~-~-a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t 135 (368)
+..|+|.. ..++.++.+. + ++.+ .+... .+.+. ....+...++++.++++++....++|+|+
T Consensus 53 g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~---~~~~~----~~~~~~~~~la~~la~~~~~~~~~~v~~~ 125 (449)
T 2cjg_A 53 GRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALN---KPSNS----DVYSVAMARFVETFARVLGDPALPHLFFV 125 (449)
T ss_dssp CCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTC---CCCTT----TCCCHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhc---CCCCc----ccCCHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 44677762 3455689999 9 9998 54432 11110 01234456889999999973223499999
Q ss_pred CCHHHHHHHHHHHccCCCCC-----------CCCEEEEcCCCCcccHHHHHHHH-----HHcCC-----EEEEEeCCC--
Q 017640 136 KNATEAINLVAYSWGLSNLK-----------SGDEVILTVAEHHSAIVPWQLVA-----QKTGA-----NLKFLNLND-- 192 (368)
Q Consensus 136 ~g~t~a~~~~~~~~~~~~~~-----------~gd~vl~~~~~~~s~~~~~~~~~-----~~~g~-----~v~~v~~~~-- 192 (368)
+|+++|+..++..+.. ... +|++|++.++.|++......... ...+. .+..++.+.
T Consensus 126 ~~gseA~~~aik~a~~-~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 204 (449)
T 2cjg_A 126 EGGALAVENALKAAFD-WKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG 204 (449)
T ss_dssp SSHHHHHHHHHHHHHH-HHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred CchHHHHHHHHHHHHH-HhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence 9999999999875410 011 28999999999997543221111 01122 566666543
Q ss_pred CC--------CCCHHHHHHhcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc---
Q 017640 193 DE--------SPDLDKLKEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV--- 253 (368)
Q Consensus 193 ~~--------~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~--- 253 (368)
.. ..++++|+++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+|++|+ ++...
T Consensus 205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~ 284 (449)
T 2cjg_A 205 LDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAW 284 (449)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS
T ss_pred hhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcce
Confidence 11 235666888884 57899999988999997666 9999999999999999999998 43321
Q ss_pred -ccCCCCCccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 254 -VDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 254 -~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
++.....+|+++ ++|.+ .+|++++++++++.+.+...+... .....+.|..+.+++.+
T Consensus 285 ~~~~~~~~~di~t--~sK~l---~iG~~~~~~~~~~~l~~~~~~~~~----------------~~~t~~~n~~~~~aa~a 343 (449)
T 2cjg_A 285 AYQQLDVAPDIVA--FGKKT---QVCGVMAGRRVDEVADNVFAVPSR----------------LNSTWGGNLTDMVRARR 343 (449)
T ss_dssp THHHHTCCCSEEE--ECGGG---SSEEEEECGGGGGSTTCTTTSTTS----------------SCCSSSSCHHHHHHHHH
T ss_pred eecccCCCceEEE--ecCcc---cEEEEEECHHHhhhhhhcccCCcc----------------cccCCCCCHHHHHHHHH
Confidence 111223577764 56977 379999999998876553211000 01122567788888888
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 333 AIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 333 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+.+ +.+.++..++.+++.+.|.++
T Consensus 344 al~~~~~---~~~~~~~~~~~~~l~~~L~~l 371 (449)
T 2cjg_A 344 ILEVIEA---EGLFERAVQHGKYLRARLDEL 371 (449)
T ss_dssp HHHHHHH---HTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 9988776 346678888888888888764
No 210
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.84 E-value=3e-20 Score=177.99 Aligned_cols=245 Identities=15% Similarity=0.133 Sum_probs=168.5
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
++.++.+.+++.+.+.... +.+. ..+...++++.++++++ .. ++|++++|+++|+..++.+.+ .+.+
T Consensus 71 G~~~~~v~~a~~~~~~~~~---~~~~------~~~~~~~l~~~la~~~~-~~-~~v~~~~sgseA~~~al~~ar--~~~~ 137 (434)
T 2epj_A 71 GHKHPRVLEAVEEALARGW---LYGA------PGEAEVLLAEKILGYVK-RG-GMIRFVNSGTEATMTAIRLAR--GYTG 137 (434)
T ss_dssp CBTCHHHHHHHHHHHHTCS---CCSS------CCHHHHHHHHHHHHHHC-TT-CEEEEESSHHHHHHHHHHHHH--HHHC
T ss_pred CCCCHHHHHHHHHHHHhCC---CCCC------CCHHHHHHHHHHHHhCC-CC-CEEEEeCCHHHHHHHHHHHHH--HhhC
Confidence 4578999999999887521 1111 13455679999999985 33 489999999999999998721 0235
Q ss_pred CCEEEEcCCCCcccHHHHHHHH----------HHcCC------EEEEEeCCCCCCCCHHHHHHhccc---CceEEEEccc
Q 017640 157 GDEVILTVAEHHSAIVPWQLVA----------QKTGA------NLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHI 217 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~----------~~~g~------~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~ 217 (368)
++.|++.++.|++........+ ...|+ ++..++.. |+++|++++++ ++++|+++..
T Consensus 138 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~ 212 (434)
T 2epj_A 138 RDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPYN-----DVEALERVFAEYGDRIAGVIVEPV 212 (434)
T ss_dssp CCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEETT-----CHHHHHHHHHHHGGGEEEEEECSS
T ss_pred CCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCCC-----CHHHHHHHHHhCCCCEEEEEEeCC
Confidence 6788888898887433111000 00132 35566653 89999999873 6788888888
Q ss_pred ccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcc--c---ccCCCCCccEEEecCcCcCCCC-cceEEEEccccc
Q 017640 218 SNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM--V---VDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLL 287 (368)
Q Consensus 218 ~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~--~---~~~~~~~~d~~~~s~~K~~g~~-G~G~l~~~~~li 287 (368)
+++||.+.| +++|.++|++||+++|+|++|+ |.. . .+.....+|++ |++|.+|+. .+|+++++++++
T Consensus 213 ~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~v~~~~~~~ 289 (434)
T 2epj_A 213 IANAGVIPPRREFLAALQRLSRESGALLILDEVVT-GFRLGLEGAQGYFNIEGDII--VLGKIIGGGFPVGAVAGSREVM 289 (434)
T ss_dssp BCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTT-TTTSSTTHHHHHHTCCCSEE--EEEGGGGTTSSCEEEEECHHHH
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchh-ceeCCcchhhHHhCCCCCee--eecchhcCCcceeeeeecHHHH
Confidence 888999988 9999999999999999999998 221 1 11112347765 667987761 289999999988
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+.+... . ......+.|..+.+++.++++.+.+ +.+.++.+++.+++.+.|.+.
T Consensus 290 ~~l~~~~~--~----------------~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 290 SLLTPQGK--V----------------FNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEEAASEV 344 (434)
T ss_dssp TTBTTTSS--B----------------CCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCC--c----------------ccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 77664210 0 0011124677778888888888776 345677777777777777654
No 211
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.84 E-value=2.1e-19 Score=172.85 Aligned_cols=270 Identities=9% Similarity=0.005 Sum_probs=165.9
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+.+......... ....+...+++++++++++...+ .|+||+|+++
T Consensus 43 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~~-~v~~~~sGse 115 (448)
T 3dod_A 43 GKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTLL------GMTNVPATQLAETLIDISPKKLT-RVFYSDSGAE 115 (448)
T ss_dssp SCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCCS------SSEEHHHHHHHHHHHHHSCTTEE-EEEEESSHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc------ccCCHHHHHHHHHHHHhCCCCCC-EEEEeCchHH
Confidence 345777653 4566899999999988654211100 11134556889999999875543 9999999999
Q ss_pred HHHHHHHHccCCCCCC----CCEEEEcCCCCcccHHHHHHHHHHc---------CCEEEEEeCCCCCCC-----------
Q 017640 141 AINLVAYSWGLSNLKS----GDEVILTVAEHHSAIVPWQLVAQKT---------GANLKFLNLNDDESP----------- 196 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~----gd~vl~~~~~~~s~~~~~~~~~~~~---------g~~v~~v~~~~~~~~----------- 196 (368)
|+..++..+......+ +|+|++.++.|++............ ...+..++.+..+..
T Consensus 116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (448)
T 3dod_A 116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQ 195 (448)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHH
Confidence 9999998872100003 5999999999987553322221100 112344444332222
Q ss_pred CHHHHHHhcc---cCceEEEEcccc-cccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccE
Q 017640 197 DLDKLKEMLS---RKTKLVVIHHIS-NMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADF 263 (368)
Q Consensus 197 d~~~l~~~l~---~~~~~v~~~~~~-n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~ 263 (368)
|+++|+++++ +++++|+++.++ |++|.+.+ +++|.++|++||+++|+||+|+ ++.. ..+.....+|+
T Consensus 196 d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di 275 (448)
T 3dod_A 196 CLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDL 275 (448)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSE
T ss_pred HHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCE
Confidence 4788999886 467888888888 99998877 9999999999999999999988 4321 12222335676
Q ss_pred EEecCcCcCCCC--cceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 264 LVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 264 ~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
++ ++|.+++. .+|++++++++++.+.+........ ......+.+..+.+++.++++.+++.
T Consensus 276 ~t--~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~--------------~~~~t~~~~~~~~aaa~aal~~~~~~- 338 (448)
T 3dod_A 276 MA--AGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTF--------------FHGHSYTGNQLGCAVALENLALFESE- 338 (448)
T ss_dssp EE--ECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCC--------------CCCCTTTTCHHHHHHHHHHHHHHHHT-
T ss_pred EE--ecccccCCcCceEEEEECHHHHHHhhhccccCCcc--------------cccCCCCcCHHHHHHHHHHHHHHhcc-
Confidence 65 55976542 4799999999988877521000000 00112255677777888888877653
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 017640 342 MQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~ 362 (368)
.+.++.+++.+++.+.|.+
T Consensus 339 --~~~~~~~~~~~~~~~~l~~ 357 (448)
T 3dod_A 339 --NIVEQVAEKSKKLHFLLQD 357 (448)
T ss_dssp --THHHHHHHHHHHHHHHHHH
T ss_pred --cHHHHHHHHHHHHHHHHHH
Confidence 3455555666666665554
No 212
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.84 E-value=8.4e-19 Score=168.85 Aligned_cols=267 Identities=8% Similarity=0.016 Sum_probs=173.8
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+.+......+. ....+...++++++++.++.+. +|+||+|+++
T Consensus 48 g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-------~~~~~~~~~la~~l~~~~~~~~--~v~~~~ggse 118 (452)
T 3n5m_A 48 GKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFPM-------SQSHEPAIKLAEKLNEWLGGEY--VIFFSNSGSE 118 (452)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCCCCT-------TSEEHHHHHHHHHHHHHHTSCE--EEEEESSHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCCccc-------ccCCHHHHHHHHHHHHhCCCCc--eEEEeCchHH
Confidence 334666643 346689999999998865321111 1123556689999999998754 3999999999
Q ss_pred HHHHHHHHccCC-CCC---CCCEEEEcCCCCcccHHHHHHHHHH---------cCCEEEEEeCCCCCCC---C-------
Q 017640 141 AINLVAYSWGLS-NLK---SGDEVILTVAEHHSAIVPWQLVAQK---------TGANLKFLNLNDDESP---D------- 197 (368)
Q Consensus 141 a~~~~~~~~~~~-~~~---~gd~vl~~~~~~~s~~~~~~~~~~~---------~g~~v~~v~~~~~~~~---d------- 197 (368)
|+..++..+... ..+ +++.|++.++.|++........... ....+..++....... |
T Consensus 119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 999999987210 003 7889999999999865332221100 0112444543211111 2
Q ss_pred --HHHHHHhcc----cCceEEEEccc-ccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 198 --LDKLKEMLS----RKTKLVVIHHI-SNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 198 --~~~l~~~l~----~~~~~v~~~~~-~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
+++|+++++ +++++|+++.+ +| ||.+.| +++|.++|++||+++|+||+|. ++.. ..+.....+
T Consensus 199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~ 277 (452)
T 3n5m_A 199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKP 277 (452)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCC
Confidence 889999987 56788999998 89 999887 9999999999999999999987 4322 122233457
Q ss_pred cEEEecCcCcCCC--CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 017640 262 DFLVASSHKMCGP--TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST 339 (368)
Q Consensus 262 d~~~~s~~K~~g~--~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~ 339 (368)
|+++ ++|.+++ .++|++++++++++.+.+....... ......+.+..+.+++.++++.+.+
T Consensus 278 di~t--~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~---------------~~~~t~~~~~~~~aaa~aal~~~~~ 340 (452)
T 3n5m_A 278 DIIT--MAKGITSAYLPLSATAVKREIYEAFKGKGEYEFF---------------RHINTFGGNPAACALALKNLEIIEN 340 (452)
T ss_dssp SEEE--ECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSC---------------CCCCSSTTCHHHHHHHHHHHHHHHH
T ss_pred CEEe--ecccccCCCcceEEEEECHHHHHHHhhccCCCCc---------------cccCCCCCCHHHHHHHHHHHHHHHh
Confidence 7775 5696654 3489999999998877531000000 0001124567777777788887765
Q ss_pred hCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 340 IGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 340 ~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
. .+.++.+++.+++.+.|.++
T Consensus 341 ~---~~~~~~~~~~~~l~~~L~~~ 361 (452)
T 3n5m_A 341 E---NLIERSAQMGSLLLEQLKEE 361 (452)
T ss_dssp T---THHHHHHHHHHHHHHHHHHH
T ss_pred c---cHHHHHHHHHHHHHHHHHHH
Confidence 3 34566666666666666554
No 213
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.84 E-value=3.5e-20 Score=178.64 Aligned_cols=262 Identities=10% Similarity=0.028 Sum_probs=179.3
Q ss_pred EEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHH
Q 017640 69 VYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAI 142 (368)
Q Consensus 69 i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~ 142 (368)
-|+|..+ .|..++.+.+++.+.+......... ....+...+++++++++++.+.+ +|+|++|+++|+
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~------~~~~~~~~~L~e~la~~~~~~~~-~v~~~~sGseA~ 148 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVMFG------GLTHEPAARLAKLLVDITPAGLD-TVFFSDSGSVSV 148 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCSS------SEECHHHHHHHHHHHHHSSTTEE-EEEEESSHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCcccc------ccCCHHHHHHHHHHHHhCCCCcC-EEEEeCcHHHHH
Confidence 5777653 4567999999999998875322100 11134556899999999986654 999999999999
Q ss_pred HHHHHHccCC---CC-CCCCEEEEcCCCCcccHHHHHHHH----------HHcCCEEEEEeCCCC--CCCCHHHHHHhcc
Q 017640 143 NLVAYSWGLS---NL-KSGDEVILTVAEHHSAIVPWQLVA----------QKTGANLKFLNLNDD--ESPDLDKLKEMLS 206 (368)
Q Consensus 143 ~~~~~~~~~~---~~-~~gd~vl~~~~~~~s~~~~~~~~~----------~~~g~~v~~v~~~~~--~~~d~~~l~~~l~ 206 (368)
..++..+... .- ..++.|++.++.|++.......+. ......+..++...+ ...|+++|+++++
T Consensus 149 ~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~ 228 (457)
T 3tfu_A 149 EVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLA 228 (457)
T ss_dssp HHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHH
Confidence 9999876210 00 234589999999987543322220 111123334443322 2247899999997
Q ss_pred ---cCceEEEEcc-cccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecCcCcCC
Q 017640 207 ---RKTKLVVIHH-ISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASSHKMCG 273 (368)
Q Consensus 207 ---~~~~~v~~~~-~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~g 273 (368)
+++++|+++. ++|++|.+.| +++|.++|++||+++|+||+|. +|.. ..+.....+|++ +++|.++
T Consensus 229 ~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~ 306 (457)
T 3tfu_A 229 QHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALT 306 (457)
T ss_dssp HHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGG
T ss_pred hCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhh
Confidence 6789999999 9999999987 9999999999999999999987 4322 112223357877 5669665
Q ss_pred C--CcceEEEEcccccccCC---Cc--ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHH
Q 017640 274 P--TGIGFLFGKSDLLSAMP---PF--LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIH 346 (368)
Q Consensus 274 ~--~G~G~l~~~~~li~~l~---~~--~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~ 346 (368)
+ ..+|++++++++++.+. +. ..+. ..+.|..+.+++.++++.+.+. .+.
T Consensus 307 gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~---------------------t~~~n~~a~aaa~aaL~~~~~~---~~~ 362 (457)
T 3tfu_A 307 GGYLSLAATLCTADVAHTISAGAAGALMHGP---------------------TFMANPLACAVSVASVELLLGQ---DWR 362 (457)
T ss_dssp TTSSCCEEEEEEHHHHHHHHHSSSCSCCCCC---------------------TTTTCHHHHHHHHHHHHHHHTS---CHH
T ss_pred CCCcceEEEEEcHHHHHHhhccCCCceeEec---------------------CCCcCHHHHHHHHHHHHHHhhh---HHH
Confidence 5 24899999999887663 11 1111 1256777777888888877653 456
Q ss_pred HHHHHHHHHHHHHHHhh
Q 017640 347 AYEVKWIICSIIVIQER 363 (368)
Q Consensus 347 ~~~~~l~~~l~~~l~~~ 363 (368)
++..++.+++.+.|.++
T Consensus 363 ~~~~~~~~~l~~~L~~l 379 (457)
T 3tfu_A 363 TRITELAAGLTAGLDTA 379 (457)
T ss_dssp HHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77788888888888765
No 214
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.84 E-value=3e-19 Score=172.42 Aligned_cols=267 Identities=11% Similarity=0.003 Sum_probs=173.9
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+.+........ ......+...+++++++++++.+.+ +|+||+|+++
T Consensus 50 G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-----~~~~~~~~~~~la~~l~~~~~~~~~-~v~~~~gGse 123 (460)
T 3gju_A 50 GRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHA-----YVGHGTEASITLAKMIIDRAPKGMS-RVYFGLSGSD 123 (460)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCC-----CTTCCCHHHHHHHHHHHHHSCTTEE-EEEEESSHHH
T ss_pred CCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcccccc-----ccccCCHHHHHHHHHHHhhCCCCcC-EEEEeCchHH
Confidence 334677643 446689999999998887531110 0011134556899999999876654 9999999999
Q ss_pred HHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHH---------HcCCEEEEEeCCC-----CCCCC-----
Q 017640 141 AINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ---------KTGANLKFLNLND-----DESPD----- 197 (368)
Q Consensus 141 a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~-----~~~~d----- 197 (368)
|+..+++.+... .-.+++.|++.++.|++.......+.. .....+..++... +...+
T Consensus 124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 203 (460)
T 3gju_A 124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS 203 (460)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence 999999887210 003578999999999986644333210 0112345555432 11123
Q ss_pred ---HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCCc
Q 017640 198 ---LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLDA 261 (368)
Q Consensus 198 ---~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~~ 261 (368)
+++|+++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+||+|+ +|... .+.....+
T Consensus 204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~p 283 (460)
T 3gju_A 204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKP 283 (460)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCC
Confidence 688888886 46789999999999998776 9999999999999999999998 44321 12223357
Q ss_pred cEEEecCcCcCCCC--cceEEEEcccccccCC-------CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 262 DFLVASSHKMCGPT--GIGFLFGKSDLLSAMP-------PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 262 d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~-------~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
|+++ ++|.+++. .+|++++++++++.+. +...+. ..+.+..+.+++.+
T Consensus 284 di~t--~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~---------------------t~~~~~~~~aaa~a 340 (460)
T 3gju_A 284 DLIT--IAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGW---------------------TYSAHPICVAAGVA 340 (460)
T ss_dssp SEEE--ECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCC---------------------TTTTCHHHHHHHHH
T ss_pred Ceee--eehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCC---------------------CCCCCHHHHHHHHH
Confidence 7765 45977653 4899999999887763 222211 12567777788888
Q ss_pred HHHHHHHhC-HHHHHHHHHHHHHHHHHHHHh
Q 017640 333 AIDYLSTIG-MQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 333 al~~~~~~g-~~~i~~~~~~l~~~l~~~l~~ 362 (368)
+++.+++.. .+.+++....+.+.+.+.+.+
T Consensus 341 al~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 371 (460)
T 3gju_A 341 NLELIDEMDLVTNAGETGAYFRAELAKAVGG 371 (460)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHhc
Confidence 888776643 234444444444444444433
No 215
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.84 E-value=5.4e-21 Score=178.23 Aligned_cols=169 Identities=15% Similarity=0.159 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCC--EEEEcCCCCcccHHHHHHHHHHcCCEEEEE
Q 017640 111 DEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGD--EVILTVAEHHSAIVPWQLVAQKTGANLKFL 188 (368)
Q Consensus 111 ~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd--~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v 188 (368)
+...++++++++++|.+ ..++++|+++++..++.++ ..+|| .|++..+.|++.+.. ...+...|++++.+
T Consensus 47 ~~~~~l~~~la~~~~~~---~~i~~~~G~~a~~~al~~~----~~~gd~~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v 118 (357)
T 3lws_A 47 AIIEPFEQKFADVLGMD---DAVFFPSGTMAQQVALRIW----SDETDNRTVAYHPLCHLEIHEQ-DGLKELHPIETILV 118 (357)
T ss_dssp TTHHHHHHHHHHHHTCS---EEEEESCHHHHHHHHHHHH----HHHHTCCEEEECTTCHHHHSST-THHHHHSSCEEEEC
T ss_pred hHHHHHHHHHHHHhCCC---cEEEecCcHHHHHHHHHHH----hhcCCCcEEEecccceeeeecc-chhhhccCcEEEEe
Confidence 34568999999999985 3466688889999999887 67787 777777766554321 11234558899888
Q ss_pred eCCCCCCCCHHHHHHhcccCceEEEEccccccc-ccccC---HHHHHHHHHhcCCEEEEecCCcC------CcccccCCC
Q 017640 189 NLNDDESPDLDKLKEMLSRKTKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSV------PHMVVDVQG 258 (368)
Q Consensus 189 ~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~------~~~~~~~~~ 258 (368)
+. +++.+|+++|+++. ++++|++++++||| |.++| +++|.++|++||+++|+|++|.. +....++.
T Consensus 119 ~~-~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~- 194 (357)
T 3lws_A 119 GA-ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA- 194 (357)
T ss_dssp SC-TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-
T ss_pred cC-CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-
Confidence 84 56788999999884 38999999999998 99887 88999999999999999999862 11111111
Q ss_pred CCccEEEecCcCcC-CCCcceEEEEcccccccCCC
Q 017640 259 LDADFLVASSHKMC-GPTGIGFLFGKSDLLSAMPP 292 (368)
Q Consensus 259 ~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~l~~ 292 (368)
...|.++.|+||.+ |+.| |+++.++++++.+..
T Consensus 195 ~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~ 228 (357)
T 3lws_A 195 GLFDSIYISFYKGLGGIAG-AILAGPAAFCQTARI 228 (357)
T ss_dssp TTSSEEEEESSSTTCCSSC-EEEEECHHHHHHHHH
T ss_pred hcCCEEEEeccccCCCCce-EEEEcCHHHHHHHHH
Confidence 24788899999988 6766 999999988877653
No 216
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.83 E-value=3.9e-21 Score=183.82 Aligned_cols=258 Identities=10% Similarity=0.029 Sum_probs=172.7
Q ss_pred CCeEEeccCCCCC-CcHHHHHHHHHHHHHhhccCCCCcchhhH-HHHHHHHHHHHHHHHHcC------CCCCCcEEEeCC
Q 017640 66 KKLVYLDNAATSQ-KPIAVLKALQNYYEAYNSNVHRGIHFLSA-KATDEYELARKKVAAFIN------ASDSGEIVFTKN 137 (368)
Q Consensus 66 ~~~i~l~~~~~~~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~r~~la~~~~------~~~~~~v~~t~g 137 (368)
+..+.|+.+.+.. .++.+.+++.+.+... ..+...+.... + .....++|++++++++ .++ ++|++|+|
T Consensus 56 ~~~i~l~~g~~~~~~~~~v~~a~~~~l~~~--~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~-~~iv~t~G 131 (427)
T 2hox_A 56 GCSADVASGDGLFLEEYWKQHKEASAVLVS--PWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKD-RYIVFGVG 131 (427)
T ss_dssp TCCEECCSCCCGGGHHHHTTSHHHHCEEEC--TTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTT-CEEEEESH
T ss_pred CceEEecCcCCCCCCCHHHHHhHHhhhhcC--CcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCC-CEEEEeCC
Confidence 5678888887763 3456666666554211 00000011100 1 0113478888888886 333 49999999
Q ss_pred HHHHHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEE
Q 017640 138 ATEAINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVV 213 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~ 213 (368)
+++++.+++.++.... +++||.|++++|.|++ +...++..|++++.+. +|++.|++++++++++|+
T Consensus 132 ~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~----~~~~~~~~g~~~~~~~------~d~~~l~~~~~~~~k~v~ 201 (427)
T 2hox_A 132 VTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPV----FREQTKYFDKKGYVWA------GNAANYVNVSNPEQYIEM 201 (427)
T ss_dssp HHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHH----HHHHHHHSCBTTEEEE------EEGGGGTTCSCGGGEEEE
T ss_pred HHHHHHHHHHHHhhccccccCCCCCEEEEeCCCccc----HHHHHHHcCCeeeeec------CCHHHHHHhhcCCceEEE
Confidence 9999999999882101 6799999999998876 4455566688776544 478899998888899999
Q ss_pred EcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCccc-ccCCCCCccEEEecCcCcCCCCc--ceEEEEc-cccccc
Q 017640 214 IHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMV-VDVQGLDADFLVASSHKMCGPTG--IGFLFGK-SDLLSA 289 (368)
Q Consensus 214 ~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~-~~~~~~~~d~~~~s~~K~~g~~G--~G~l~~~-~~li~~ 289 (368)
+++++||||.+++ + + ++ ++..+.|+++..+..+ .++. .+.+++++|+||.+|++| +||++++ +++++.
T Consensus 202 l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~ 273 (427)
T 2hox_A 202 VTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALIKDESVYNN 273 (427)
T ss_dssp EESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHH
T ss_pred EcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCCCCccccC-CCceEEEEeChhcCCCCCceEEEEEECCHHHHHH
Confidence 9999999999999 4 3 33 5678899887532222 2232 468999999999999888 9999994 788777
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH----------hCHHHHHHHHHHHHHHHHHH
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLST----------IGMQKIHAYEVKWIICSIIV 359 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~----------~g~~~i~~~~~~l~~~l~~~ 359 (368)
+......+ ..+.+.....++..+++...+ .-++.++++.++..+++.+.
T Consensus 274 l~~~~~~~---------------------~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 332 (427)
T 2hox_A 274 LLNYMTKN---------------------TEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITAL 332 (427)
T ss_dssp HHHHHHHH---------------------TSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhc---------------------CCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 66443211 113445555555555553221 11345677788888889999
Q ss_pred HHhhcCC
Q 017640 360 IQERHNT 366 (368)
Q Consensus 360 l~~~~g~ 366 (368)
|++.+|+
T Consensus 333 L~~~~g~ 339 (427)
T 2hox_A 333 LDQSDRF 339 (427)
T ss_dssp HTTSSSE
T ss_pred HHhCcCc
Confidence 9876553
No 217
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.83 E-value=1.2e-18 Score=167.76 Aligned_cols=262 Identities=12% Similarity=0.131 Sum_probs=171.2
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+++........ .....+...+++++++++++....++|+||+|+++
T Consensus 63 G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~------~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGse 136 (453)
T 4ffc_A 63 GNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTCF------MVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAE 136 (453)
T ss_dssp SCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTT------TTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHH
T ss_pred CCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhcccccc------CcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHH
Confidence 345777653 446799999999999876522111 11124555689999999998653358999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----------cCCEEEEEeCCCC----CCCC--------H
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----------TGANLKFLNLNDD----ESPD--------L 198 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----------~g~~v~~v~~~~~----~~~d--------~ 198 (368)
|+..+++.+.. ...++.|++.++.||+.......+... ....+..++.... +..+ +
T Consensus 137 A~~~alk~a~~--~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 214 (453)
T 4ffc_A 137 AVENAIKVARL--ATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAI 214 (453)
T ss_dssp HHHHHHHHHHH--HHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHH--hcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHH
Confidence 99999986521 135689999999999876544333110 0114556665411 1112 4
Q ss_pred HHHHHhccc-CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCccEEEecC
Q 017640 199 DKLKEMLSR-KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDADFLVASS 268 (368)
Q Consensus 199 ~~l~~~l~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~ 268 (368)
+.|++.+.+ ++++|+++..++..|.+.+ +++|.++|++||+++|+|++|. ++.. ..+.....+|+++ +
T Consensus 215 ~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t--~ 292 (453)
T 4ffc_A 215 SRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVT--M 292 (453)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEE--E
T ss_pred HHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHh--h
Confidence 667777654 4566666666666677766 9999999999999999999987 4322 1111223467665 5
Q ss_pred cCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Q 017640 269 HKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHA 347 (368)
Q Consensus 269 ~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~ 347 (368)
+|.+++ -.+|++++++++++.+.+...+.+ .+.+..+.+++.++++.+.+. .+.+
T Consensus 293 sK~~~~G~~~G~~~~~~~i~~~~~~~~~~~t---------------------~~~~~~~~aaa~aal~~~~~~---~~~~ 348 (453)
T 4ffc_A 293 AKGIAGGMPLSAVTGRAELMDAVYAGGLGGT---------------------YGGNPVTCAAAVAALGVMREL---DLPA 348 (453)
T ss_dssp CGGGGTTSSCEEEEEEHHHHTTSCTTSSCCS---------------------SSSCHHHHHHHHHHHHHHHHT---THHH
T ss_pred hhhhcCCcCeEEEEECHHHHhhhcccCcCCC---------------------CCcCHHHHHHHHHHHHHhhhh---hHHH
Confidence 697765 228999999999888775543222 145677777788888877653 3445
Q ss_pred HHHHHHHHHHHHHHh
Q 017640 348 YEVKWIICSIIVIQE 362 (368)
Q Consensus 348 ~~~~l~~~l~~~l~~ 362 (368)
+.+++.+++.+.|.+
T Consensus 349 ~~~~~~~~l~~~l~~ 363 (453)
T 4ffc_A 349 RARAIEASVTSRLSA 363 (453)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 555555555555544
No 218
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.83 E-value=4.5e-19 Score=170.72 Aligned_cols=263 Identities=11% Similarity=0.092 Sum_probs=171.8
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.++.+.+++.+.+...... + ......+...+++++++++++....++|+||+|++
T Consensus 59 ~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~---~---~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGs 132 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHT---C---FMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGS 132 (451)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCC---T---TTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHH
T ss_pred CCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhcccc---c---CCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHH
Confidence 3445777653 4467999999999988654211 1 01112345568999999999755334899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----------cCCEEEEEeCCCCC------C-------C
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----------TGANLKFLNLNDDE------S-------P 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----------~g~~v~~v~~~~~~------~-------~ 196 (368)
+|+..+++.+.. ...++.|++.++.||+.......+... ....+..++....+ . .
T Consensus 133 eA~~~Alk~a~~--~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 210 (451)
T 3oks_A 133 EAVENAVKIARS--HTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGEL 210 (451)
T ss_dssp HHHHHHHHHHHH--HHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHH
T ss_pred HHHHHHHHHHHH--hcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHH
Confidence 999999987621 135689999999999876544332110 01145666654110 0 1
Q ss_pred CHHHHHHhcc-----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCcc
Q 017640 197 DLDKLKEMLS-----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDAD 262 (368)
Q Consensus 197 d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~d 262 (368)
+++.+++.+. .++++|+++..++..|.+.+ +++|.++|++||+++|+|++|. ++.. ..+.....+|
T Consensus 211 ~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pd 290 (451)
T 3oks_A 211 AAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPD 290 (451)
T ss_dssp HHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCS
T ss_pred HHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCC
Confidence 2444444443 34677788887777788777 9999999999999999999997 3321 1222233567
Q ss_pred EEEecCcCcCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhC
Q 017640 263 FLVASSHKMCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIG 341 (368)
Q Consensus 263 ~~~~s~~K~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g 341 (368)
++ +++|.+|+ -.+|++++++++++.+.+...+.+. +.+..+.++..++++.+.+.
T Consensus 291 i~--t~sK~l~~G~~iG~v~~~~~~~~~~~~~~~~~t~---------------------~~~~~~~aaa~aal~~~~~~- 346 (451)
T 3oks_A 291 LI--VTAKGIAGGLPLSAVTGRAEIMDSPHVSGLGGTY---------------------GGNPIACAAALATIETIESE- 346 (451)
T ss_dssp EE--EECGGGGTTSSCEEEEEEHHHHTCSCTTSBCCSS---------------------SSCHHHHHHHHHHHHHHHHT-
T ss_pred ee--eehhhhhCCcceEEEEECHHHHhhhcCCCcCCCC---------------------CCCHHHHHHHHHHHHHHhhh-
Confidence 76 55697765 2289999999998887755432221 56777777788888877653
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 017640 342 MQKIHAYEVKWIICSIIVIQE 362 (368)
Q Consensus 342 ~~~i~~~~~~l~~~l~~~l~~ 362 (368)
.+.++.+++.+++.+.|.+
T Consensus 347 --~~~~~~~~~~~~l~~~L~~ 365 (451)
T 3oks_A 347 --GLVARAQQIEKIMKDRLGR 365 (451)
T ss_dssp --THHHHHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHHH
Confidence 4455555666666665554
No 219
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.83 E-value=7.6e-19 Score=169.95 Aligned_cols=264 Identities=11% Similarity=-0.011 Sum_probs=178.6
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhc-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~ 138 (368)
++.-|+|..+ .|+.++.+.+++.+.+..... +...+ ...+...++++.++++++.+.+ .|+|++|+
T Consensus 53 ~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~------~~~~~~~~lae~l~~~~~~~~~-~v~~~~sG 125 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFK------TTHVPAIALAQKLAELAPGDLN-HVFFAGGG 125 (472)
T ss_dssp TCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSS------EECHHHHHHHHHHHHHSCTTEE-EEEEESSH
T ss_pred CCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccc------cCCHHHHHHHHHHHHhCCCCCC-EEEEeCCH
Confidence 3445777653 456799999999999887531 11100 1134556799999999876544 89999999
Q ss_pred HHHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHHH--------cCCEEEEEeCCC-----CCCCC----
Q 017640 139 TEAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQK--------TGANLKFLNLND-----DESPD---- 197 (368)
Q Consensus 139 t~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~--------~g~~v~~v~~~~-----~~~~d---- 197 (368)
++|+..+++.+... .-.+++.|++.++.|++.......+... ....+..++... ++ .|
T Consensus 126 seA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~ 204 (472)
T 3hmu_A 126 SEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEF 204 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHH
Confidence 99999999987210 0025679999999999865433222100 011344555332 11 23
Q ss_pred ----HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCccc----ccCCCCC
Q 017640 198 ----LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHMV----VDVQGLD 260 (368)
Q Consensus 198 ----~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~~----~~~~~~~ 260 (368)
+++|++.++ +++++|+++.+++++|.+.| +++|.++|++||+++|+||+|. +|... .+.....
T Consensus 205 ~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~ 284 (472)
T 3hmu_A 205 GLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIR 284 (472)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCC
Confidence 788888886 46789999999999999887 9999999999999999999997 43321 1222335
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCCCc--ccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPF--LGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDY 336 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~ 336 (368)
+|++++ +|.+|.. .+|++++++++++.+.+. ..+. ..+.|..+.+++.++++.
T Consensus 285 pdi~t~--sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~---------------------t~~~np~a~aAa~aaL~~ 341 (472)
T 3hmu_A 285 PHIMTI--AKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGY---------------------TYSGHPVAAAVALENLRI 341 (472)
T ss_dssp CSEEEE--CGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCC---------------------TTTTCHHHHHHHHHHHHH
T ss_pred Cceeee--chhhhcCCcceEEEEECHHHHHhcccCCccccC---------------------CCCCCHHHHHHHHHHHHH
Confidence 788765 4977654 389999999998877321 1111 124567777778888887
Q ss_pred HHHhCHHHHHHHHH-HHHHHHHHHHHhh
Q 017640 337 LSTIGMQKIHAYEV-KWIICSIIVIQER 363 (368)
Q Consensus 337 ~~~~g~~~i~~~~~-~l~~~l~~~l~~~ 363 (368)
+++. .+.++.+ ++.+++.+.|+++
T Consensus 342 ~~~~---~~~~~~~~~~~~~l~~~L~~l 366 (472)
T 3hmu_A 342 LEEE---NILDHVRNVAAPYLKEKWEAL 366 (472)
T ss_dssp HHHT---THHHHHHHTHHHHHHHHHHGG
T ss_pred HHHh---HHHHHHHHHHHHHHHHHHHHH
Confidence 7653 4566666 7777777777654
No 220
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.83 E-value=1.5e-19 Score=172.62 Aligned_cols=245 Identities=14% Similarity=0.095 Sum_probs=168.1
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
++.++.+.+++.+.+.... +.+. ..+...++++.++++++ .. ++|++++|+++|+..+++... .+.+
T Consensus 67 G~~~p~v~~a~~~~~~~~~---~~~~------~~~~~~~l~~~l~~~~~-~~-~~v~~~~~g~ea~~~al~~ar--~~~~ 133 (424)
T 2e7u_A 67 GHAHPKVLARVRETLERGL---TFGA------PSPLEVALAKKVKRAYP-FV-DLVRFVNSGTEATMSALRLAR--GYTG 133 (424)
T ss_dssp CBTCHHHHHHHHHHHHTCS---CCSS------CCHHHHHHHHHHHHHCT-TC-CEEEEESSHHHHHHHHHHHHH--HHHC
T ss_pred CCCCHHHHHHHHHHHHhCC---CCCC------CCHHHHHHHHHHHHhCC-CC-CEEEEeCCHHHHHHHHHHHHH--HhhC
Confidence 4578999999999887521 1111 13455688999999986 33 499999999999999998610 0234
Q ss_pred CCEEEEcCCCCcccHHHHHHHHH----------HcC------CEEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEccc
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQ----------KTG------ANLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHI 217 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~----------~~g------~~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~ 217 (368)
++.|++.++.|++........+. ..| .++..++.. |+++|+++++ +++++|+++..
T Consensus 134 ~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~ 208 (424)
T 2e7u_A 134 RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEYN-----DPEGLREVLKRRGEEIAAIIFEPV 208 (424)
T ss_dssp CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECTT-----CHHHHHHHHHHHGGGEEEEEECSS
T ss_pred CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCCC-----CHHHHHHHHHhCCCCEEEEEEeCC
Confidence 57888999999874432111000 012 235555543 8999999886 45677777766
Q ss_pred ccccccccC----HHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcCCCC-cceEEEEccccc
Q 017640 218 SNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMCGPT-GIGFLFGKSDLL 287 (368)
Q Consensus 218 ~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~g~~-G~G~l~~~~~li 287 (368)
+++||.+.| +++|.++ ++||+++|+|++|+ +.. ..+.....+|++ |++|.+|+. .+|+++++++++
T Consensus 209 ~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G~~~~~~~~~ 284 (424)
T 2e7u_A 209 VGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMT-GFRLAFGGATELLGLKPDLV--TLGKILGGGLPAAAYAGRREIM 284 (424)
T ss_dssp BCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTT-TTTSSTTHHHHHHTCCCSEE--EECGGGGTTSSCEEEEECHHHH
T ss_pred CCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcc-ccccchhHHHHHhCCCcchh--hhhhhhhCCcceEEEEEcHHHH
Confidence 666999887 9999999 99999999999998 221 111112346765 777988751 289999999988
Q ss_pred ccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 288 SAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 288 ~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+.+... . ......+.|..+.+++.++++.+.+ .+.+.++..++.+++.+.|.++
T Consensus 285 ~~~~~~~~--~----------------~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 285 EKVAPLGP--V----------------YQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEAGLKEV 340 (424)
T ss_dssp TTBTTTSS--B----------------CCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCC--c----------------ccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHH
Confidence 87764210 0 0111225677777888888888766 2567788888888888888765
No 221
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.83 E-value=1.3e-19 Score=173.46 Aligned_cols=252 Identities=15% Similarity=0.078 Sum_probs=170.3
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+.+...... + + ..+...+++++++++++ .. ++|+|++|+++
T Consensus 52 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~---~-~-----~~~~~~~l~~~la~~~~-~~-~~v~~~~~Gse 120 (429)
T 3k28_A 52 GNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF---G-A-----PTEIENKLAKLVIERVP-SI-EIVRMVNSGTE 120 (429)
T ss_dssp CCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC---S-S-----CCHHHHHHHHHHHHHST-TC-SEEEEESSHHH
T ss_pred CCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc---C-C-----CCHHHHHHHHHHHHhCC-CC-CEEEEeCChHH
Confidence 445777654 3356999999999988764211 1 0 12445578999999987 33 49999999999
Q ss_pred HHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC-------------------CEEEEEeCCCCCCCCHHHH
Q 017640 141 AINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG-------------------ANLKFLNLNDDESPDLDKL 201 (368)
Q Consensus 141 a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g-------------------~~v~~v~~~~~~~~d~~~l 201 (368)
|+..++..+.. ..+++.|++.++.|++....... ..| .++..++.+ |+++|
T Consensus 121 a~~~ai~~a~~--~~~~~~vi~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l 190 (429)
T 3k28_A 121 ATMSALRLARG--YTGRNKILKFIGCYHGHGDSLLI---KAGSGVATLGLPDSPGVPEGVAKNTITVAYN-----DLESV 190 (429)
T ss_dssp HHHHHHHHHHH--HHTCCEEEEEETCCCCSCGGGCS---SCCTTC-----CCCTTCCHHHHTTEEEEETT-----CHHHH
T ss_pred HHHHHHHHHHH--hhCCCEEEEECCCcCCCcHHHHH---hcCCcccccCCCCcCCCCCcccCceeecCCC-----CHHHH
Confidence 99999987621 13678899999988864322111 011 133344443 89999
Q ss_pred HHhcc---cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcC---Ccc-cccCCCCCccEEEecCcC
Q 017640 202 KEMLS---RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSV---PHM-VVDVQGLDADFLVASSHK 270 (368)
Q Consensus 202 ~~~l~---~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~---~~~-~~~~~~~~~d~~~~s~~K 270 (368)
+++++ +++++|+++.+++++|.+.| +++|.++|++||+++|+||+|.- |.. ..+.....+|+++ ++|
T Consensus 191 e~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t--~sK 268 (429)
T 3k28_A 191 KYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLTC--LGK 268 (429)
T ss_dssp HHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEE--ECG
T ss_pred HHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCceeh--hhh
Confidence 99886 46788889988888999988 99999999999999999999962 111 1111223467654 569
Q ss_pred cCCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHH
Q 017640 271 MCGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYE 349 (368)
Q Consensus 271 ~~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~ 349 (368)
.+|+ ..+|++++++++++.+.+.... ......+.+..+.+++.++++..+ +.+.++.
T Consensus 269 ~~~~G~~iG~~~~~~~~~~~~~~~~~~------------------~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~ 326 (429)
T 3k28_A 269 VIGGGLPVGAYGGKAEIMRQVAPSGPI------------------YQAGTLSGNPLAMAAGYETLVQLT----PESYVEF 326 (429)
T ss_dssp GGGTTSCCEEEEECHHHHTTBTTTSSB------------------CCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHH
T ss_pred hhcCCCCeEEEEEcHHHHhhhccCCCc------------------cccCCCCCChHHHHHHHHHHHHHH----HHHHHHH
Confidence 7764 2389999999998877542100 001112456666666666665432 6677788
Q ss_pred HHHHHHHHHHHHhh
Q 017640 350 VKWIICSIIVIQER 363 (368)
Q Consensus 350 ~~l~~~l~~~l~~~ 363 (368)
+++.+++.+.|.++
T Consensus 327 ~~~~~~l~~~L~~~ 340 (429)
T 3k28_A 327 ERKAEMLEAGLRKA 340 (429)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887764
No 222
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.82 E-value=3.1e-19 Score=170.57 Aligned_cols=254 Identities=17% Similarity=0.121 Sum_probs=171.5
Q ss_pred eEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 68 LVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 68 ~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
.-|+|..+ .|+.++.+.+++.+.+.....+ +. ..+...+++++++++++ +. ++|+|++|+++|
T Consensus 52 ~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~---~~------~~~~~~~la~~l~~~~~-~~-~~v~~~~ggsea 120 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSF---GA------PCALENVLAEMVNDAVP-SI-EMVRFVNSGTEA 120 (427)
T ss_dssp CEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC---SS------CCHHHHHHHHHHHHHST-TC-SEEEEESSHHHH
T ss_pred CEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCc---CC------CCHHHHHHHHHHHHhCC-CC-CEEEEeCCHHHH
Confidence 34666643 2346999999999888653211 10 24556689999999997 33 499999999999
Q ss_pred HHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHH----HHH------------cCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 142 INLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLV----AQK------------TGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 142 ~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~----~~~------------~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
+..++..... ..+++.|++.++.|++........ ... .+.++..++.+ |+++|++++
T Consensus 121 ~~~al~~a~~--~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l 193 (427)
T 3fq8_A 121 CMAVLRIMRA--YTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYN-----DLEAVKALF 193 (427)
T ss_dssp HHHHHHHHHH--HHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-----CHHHHHHHH
T ss_pred HHHHHHHHHH--hhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCC-----CHHHHHHHH
Confidence 9999954310 234578999888888643211100 000 01124555544 899999998
Q ss_pred cc---CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc---CCcc-cccCCCCCccEEEecCcCcCCC
Q 017640 206 SR---KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS---VPHM-VVDVQGLDADFLVASSHKMCGP 274 (368)
Q Consensus 206 ~~---~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~---~~~~-~~~~~~~~~d~~~~s~~K~~g~ 274 (368)
++ ++++|+++.+++++|.+.| +++|.++|++||+++|+|++|+ .|.. ..+.....+|++ +++|.+|+
T Consensus 194 ~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~--t~sK~~~~ 271 (427)
T 3fq8_A 194 AENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAYGGVQEKFGVTPDLT--TLGKIIGG 271 (427)
T ss_dssp HHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBTTHHHHHTTCCCSEE--EECGGGGT
T ss_pred HhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchhhHhcCCCCChh--hhhhhhhC
Confidence 76 6789999999999999999 9999999999999999999998 1211 112223346765 55598873
Q ss_pred Cc--ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Q 017640 275 TG--IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKW 352 (368)
Q Consensus 275 ~G--~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l 352 (368)
| +|++++++++++.+.+.... ......+.+..+.+++.++++.+.+ +.+.++.+++
T Consensus 272 -G~~~G~~~~~~~~~~~~~~~~~~------------------~~~~t~~~~~~~~aa~~aal~~~~~---~~~~~~~~~~ 329 (427)
T 3fq8_A 272 -GLPVGAYGGKREIMQLVAPAGPM------------------YQAGTLSGNPLAMTAGIKTLELLRQ---PGTYEYLDQI 329 (427)
T ss_dssp -TSSCEEEEECHHHHTTBTTTSSB------------------CCCCTTTTCHHHHHHHHHHHHHHTS---TTHHHHHHHH
T ss_pred -CcceEEEEEcHHHHHhhccCCCc------------------cccCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHH
Confidence 5 99999999998877643110 0001114577777778788876654 3456667777
Q ss_pred HHHHHHHHHhh
Q 017640 353 IICSIIVIQER 363 (368)
Q Consensus 353 ~~~l~~~l~~~ 363 (368)
.+++.+.|.+.
T Consensus 330 ~~~~~~~l~~~ 340 (427)
T 3fq8_A 330 TKRLSDGLLAI 340 (427)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777766653
No 223
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.82 E-value=5e-19 Score=169.23 Aligned_cols=256 Identities=14% Similarity=0.105 Sum_probs=167.8
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|+|..+ .|+.++.+.+++.+.+...... + + ..+...+++++++++++ .. ++|+|++|++
T Consensus 51 ~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~---~-~-----~~~~~~~la~~l~~~~~-~~-~~v~~~~sGs 119 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSF---G-A-----PTEMEVKMAQLVTDLVP-TM-DMVRMVNSGT 119 (429)
T ss_dssp TCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC---S-S-----CCHHHHHHHHHHHHHST-TC-SEEEEESSHH
T ss_pred CCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCccc---C-C-----CCHHHHHHHHHHHhhCC-CC-CEEEEeCcHH
Confidence 3445777753 2346899999999988653211 1 1 12455688999999997 33 4999999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC-----------------CEEEEEeCCCCCCCCHHHHH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG-----------------ANLKFLNLNDDESPDLDKLK 202 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g-----------------~~v~~v~~~~~~~~d~~~l~ 202 (368)
+|+..++..... ..+++.|++.++.|++......... ..+ ..+..++.+ |+++|+
T Consensus 120 ea~~~al~~a~~--~~~~~~ii~~~~~yhg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le 191 (429)
T 4e77_A 120 EATMSAIRLARG--YTGRDKIIKFEGCYHGHADCLLVKA-GSGALTLGQPNSPGVPTDFAKHTLTCTYN-----DLASVR 191 (429)
T ss_dssp HHHHHHHHHHHH--HHCCCEEEEETTCCCC-------------------CCCTTSCGGGGTTEEEECTT-----CHHHHH
T ss_pred HHHHHHHHHHHH--hhCCCEEEEEcCccCCCChhhhhhc-CCcccccCCCCcCCCCCccCCceeecCCC-----CHHHHH
Confidence 999999985411 2356789999999988654222110 001 112223322 899999
Q ss_pred Hhccc---CceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc---CCcc-cccCCCCCccEEEecCcCc
Q 017640 203 EMLSR---KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS---VPHM-VVDVQGLDADFLVASSHKM 271 (368)
Q Consensus 203 ~~l~~---~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~---~~~~-~~~~~~~~~d~~~~s~~K~ 271 (368)
+++++ ++++|+++..++.+|.+.| +++|.++|++||+++|+|++|+ .|.. ..+.....+|++ |++|.
T Consensus 192 ~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~~~~~~~~~~pdi~--t~sK~ 269 (429)
T 4e77_A 192 QAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYHVIPDLT--CLGKI 269 (429)
T ss_dssp HHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTTCHHHHTTCCCSEE--EEEGG
T ss_pred HHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcchHHHhcCCCCCee--eeccc
Confidence 99863 5678888777777888888 9999999999999999999998 2221 112223346765 66697
Q ss_pred CCC-CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Q 017640 272 CGP-TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEV 350 (368)
Q Consensus 272 ~g~-~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~ 350 (368)
+|+ ..+|++++++++++.+.+.... ......+.+..+.+++.++++.+++ +.+.++.+
T Consensus 270 ~~~G~~~G~~~~~~~~~~~l~~~~~~------------------~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~ 328 (429)
T 4e77_A 270 IGGGMPVGAFGGRREVMNALAPTGPV------------------YQAGTLSGNPIAMAAGFACLTEISQ---VGVYETLT 328 (429)
T ss_dssp GGTTSCCEEEEECHHHHTTBTTTSSB------------------CC--CCCCCHHHHHHHHHHHHHHTS---TTHHHHHH
T ss_pred ccCCCCeEEEEECHHHHHHhccCCCc------------------cccCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHH
Confidence 763 2389999999988877643100 0111225777888888888887754 34556666
Q ss_pred HHHHHHHHHHHhh
Q 017640 351 KWIICSIIVIQER 363 (368)
Q Consensus 351 ~l~~~l~~~l~~~ 363 (368)
++.+++.+.|.+.
T Consensus 329 ~~~~~l~~~L~~~ 341 (429)
T 4e77_A 329 ELTDSLATGLRHA 341 (429)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 6777776666553
No 224
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.82 E-value=5.7e-19 Score=170.38 Aligned_cols=260 Identities=13% Similarity=0.020 Sum_probs=172.2
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhc-cCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNS-NVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
+.-|+|..+ .|+.++.+.+++.+.+..... ++. .....+...+++++++++++.+.+ .|+|++|++
T Consensus 49 g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~------~~~~~~~~~~la~~l~~~~~~~~~-~v~~~~ggs 121 (459)
T 4a6r_A 49 GNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTF------FKTTHPAVVELSSLLAEVTPAGFD-RVFYTNSGS 121 (459)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTT------SSSCCHHHHHHHHHHHHHSCTTCC-EEEEESSHH
T ss_pred CCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccc------cccCCHHHHHHHHHHHHhCCCCCC-EEEEeCchH
Confidence 345777653 446689999999999876431 111 011235556899999999987654 999999999
Q ss_pred HHHHHHHHHccCC----CCCCCCEEEEcCCCCcccHHHHHHHHH---------HcCCEEEEEeCCC-----CCCCC----
Q 017640 140 EAINLVAYSWGLS----NLKSGDEVILTVAEHHSAIVPWQLVAQ---------KTGANLKFLNLND-----DESPD---- 197 (368)
Q Consensus 140 ~a~~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~---------~~g~~v~~v~~~~-----~~~~d---- 197 (368)
+|+..++..+... .-.+++.|++.++.|++.......... .....+..++... ++ .|
T Consensus 122 eA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~ 200 (459)
T 4a6r_A 122 ESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEF 200 (459)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHH
Confidence 9999999987210 002578999999999986543333210 0011334444321 12 34
Q ss_pred ----HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCC
Q 017640 198 ----LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLD 260 (368)
Q Consensus 198 ----~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~ 260 (368)
+++|++++. +++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|. ++.. ..+.....
T Consensus 201 ~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~ 280 (459)
T 4a6r_A 201 GVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQ 280 (459)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCC
Confidence 788888886 45688888888888888887 9999999999999999999987 4322 11222335
Q ss_pred ccEEEecCcCcCCCC--cceEEEEcccccccCC---CcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 017640 261 ADFLVASSHKMCGPT--GIGFLFGKSDLLSAMP---PFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID 335 (368)
Q Consensus 261 ~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~ 335 (368)
+|++++ +|.+++. .+|++++++++++.+. +...+.+. +.+..+.+++.++++
T Consensus 281 pdi~t~--sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~---------------------~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 281 PDLFTA--AKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTY---------------------SGHPVCAAVAHANVA 337 (459)
T ss_dssp CSEEEE--CGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHH---------------------CSCHHHHHHHHHHHH
T ss_pred CCeeeh--hhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCC---------------------CCCHHHHHHHHHHHH
Confidence 777765 5976653 4899999999887765 22222111 456677777788888
Q ss_pred HHHHhCHHHHHHHHH-HHHHHHHHHH
Q 017640 336 YLSTIGMQKIHAYEV-KWIICSIIVI 360 (368)
Q Consensus 336 ~~~~~g~~~i~~~~~-~l~~~l~~~l 360 (368)
.+++.. +.++.+ ++.+++.+.|
T Consensus 338 ~~~~~~---~~~~~~~~~~~~~~~~l 360 (459)
T 4a6r_A 338 ALRDEG---IVQRVKDDIGPYMQKRW 360 (459)
T ss_dssp HHHHTC---HHHHHHHTHHHHHHHHH
T ss_pred HHhcch---HHHHHHHHHHHHHHHHH
Confidence 776533 344444 4555555554
No 225
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.81 E-value=5.7e-20 Score=177.62 Aligned_cols=258 Identities=15% Similarity=0.095 Sum_probs=162.1
Q ss_pred CeEEeccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHH
Q 017640 67 KLVYLDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVA 146 (368)
Q Consensus 67 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~ 146 (368)
+..|+|+....+. +.+.+++.+.+... . ..+. ......+++++++++++.+ ++++|+|+|+|+..++
T Consensus 40 ~~~ylD~~~~~~~-~~v~~a~~~~l~~~--~---~~y~----~~~~~~~l~~~la~~~~~~---~v~~t~~gt~A~~~al 106 (467)
T 2oqx_A 40 EDVFIDLLTDSGT-GAVTQSMQAAMMRG--D---EAYS----GSRSYYALAESVKNIFGYQ---YTIPTHQGRGAEQIYI 106 (467)
T ss_dssp GGCSEECSCCSSC-SCCCHHHHHHTTSC--C---CCSS----SCHHHHHHHHHHHHHHCCS---EEEEEC--CCSHHHHH
T ss_pred CCeeEecccCCCc-HHHHHHHHHHhccC--c---ceec----cCchhHHHHHHHHHHhCcC---cEEEcCCcHHHHHHHH
Confidence 4468888654444 67777776665321 0 0111 1234457899999999873 8999999999999999
Q ss_pred HHccCCCCCC-----C----CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe------CC----CCCCCCHHHHHHhccc
Q 017640 147 YSWGLSNLKS-----G----DEVILTVAEHHSAIVPWQLVAQKTGANLKFLN------LN----DDESPDLDKLKEMLSR 207 (368)
Q Consensus 147 ~~~~~~~~~~-----g----d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~------~~----~~~~~d~~~l~~~l~~ 207 (368)
.++ .++ | |+|++. +.|...+ .......|+.+.... .+ .++.+|+++|++++++
T Consensus 107 ~~~----~~~~~~~~G~~~~d~Ii~~-~~h~~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~ 178 (467)
T 2oqx_A 107 PVL----IKKREQEKGLDRSKMVAFS-NYFFDTT---QGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEE 178 (467)
T ss_dssp HHH----HHHHHHHHCCCTTTCEEEE-SSCCHHH---HHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHH
T ss_pred HHH----hccccccCCCCccceEEec-ccccccc---hhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHh
Confidence 988 556 7 887776 4554433 222334466665432 12 2467899999999973
Q ss_pred ----CceEEEEccccccc-ccccC---HHHHHHHHHhcCCEEEEecCCcC-----------CcccccCCC------CCcc
Q 017640 208 ----KTKLVVIHHISNML-ASILP---IEEIVHWSHDVGAKVLVDACQSV-----------PHMVVDVQG------LDAD 262 (368)
Q Consensus 208 ----~~~~v~~~~~~n~t-G~~~~---l~~i~~l~~~~g~~li~D~a~~~-----------~~~~~~~~~------~~~d 262 (368)
++++|++++++||+ |.+++ +++|.++|++||+++|+|++|+. +....+... ...|
T Consensus 179 ~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d 258 (467)
T 2oqx_A 179 VGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD 258 (467)
T ss_dssp HCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS
T ss_pred cCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC
Confidence 78999999999998 88777 78999999999999999987765 111111111 2367
Q ss_pred EEEecCcCcCCCCcceEEEEccc-cccc---CCCcc-cCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 263 FLVASSHKMCGPTGIGFLFGKSD-LLSA---MPPFL-GGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 263 ~~~~s~~K~~g~~G~G~l~~~~~-li~~---l~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
++++|+||.+|++-.|+++.+++ +++. +++.. .+++. ...++.+...+.++..+++..
T Consensus 259 ~~~~s~sK~~g~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~al~~~l~~~ 321 (467)
T 2oqx_A 259 MLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGF-----------------PTYGGLEGGAMERLAVGLYDG 321 (467)
T ss_dssp EEEEESSSTTCCSSCEEEEECSGGGHHHHHHHHHHHHHTTSS-----------------CCCCCCCHHHHHHHHHHHHHT
T ss_pred eEEEecccccCCCCceEEEecChhHHHHHHHHHHhhhccCCc-----------------ccccchhhhHHHHHHHhhHhh
Confidence 88999999888662378888776 4433 33221 11111 112344544444443332211
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHhhcCC
Q 017640 338 STIGMQKIHAYEVKWIICSIIVIQERHNT 366 (368)
Q Consensus 338 ~~~g~~~i~~~~~~l~~~l~~~l~~~~g~ 366 (368)
.. +...++..++.+++.+.|.+. |+
T Consensus 322 --~~-~~~~~~~~~~~~~l~~~L~~~-~~ 346 (467)
T 2oqx_A 322 --MN-LDWLAYRIAQVQYLVDGLEEI-GV 346 (467)
T ss_dssp --TC-HHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred --hh-HHHHHHHHHHHHHHHHHHHHC-CC
Confidence 11 122344567788888888776 54
No 226
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.81 E-value=2.8e-18 Score=166.16 Aligned_cols=271 Identities=11% Similarity=0.060 Sum_probs=179.0
Q ss_pred CeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHH
Q 017640 67 KLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATE 140 (368)
Q Consensus 67 ~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 140 (368)
+.-|+|..+ .|+.++.+.+++.+.+......... ....+...++.++++++++.+.+ .|+|++|+++
T Consensus 53 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~------~~~~~~~~~la~~l~~~~~~~~~-~v~~~~sGse 125 (476)
T 3i5t_A 53 GRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPW------YMATSPAARLAEKIATLTPGDLN-RIFFTTGGST 125 (476)
T ss_dssp CCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT------TCBCHHHHHHHHHHHTTSSTTCC-EEEEESSHHH
T ss_pred CCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccC------ccCCHHHHHHHHHHHhcCCCCcC-EEEEeCchHH
Confidence 345677642 4567999999999998874221110 11245566889999999876554 9999999999
Q ss_pred HHHHHHHHccCCC----CCCCCEEEEcCCCCcccHHHHHHHHHH------c---CCEEEEEeCCCC--C-CCC-------
Q 017640 141 AINLVAYSWGLSN----LKSGDEVILTVAEHHSAIVPWQLVAQK------T---GANLKFLNLNDD--E-SPD------- 197 (368)
Q Consensus 141 a~~~~~~~~~~~~----~~~gd~vl~~~~~~~s~~~~~~~~~~~------~---g~~v~~v~~~~~--~-~~d------- 197 (368)
|+..++..+.... -..++.|++.++.|++........... . ...+..++.... . ..|
T Consensus 126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (476)
T 3i5t_A 126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDD 205 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHH
Confidence 9999999872100 034679999999999865433222100 0 012334442211 1 112
Q ss_pred -HHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----ccc-CCCCCcc
Q 017640 198 -LDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVD-VQGLDAD 262 (368)
Q Consensus 198 -~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~-~~~~~~d 262 (368)
+++|+++++ +++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|+ +|.. ..+ .....+|
T Consensus 206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pd 285 (476)
T 3i5t_A 206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPD 285 (476)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcc
Confidence 778888886 46789999999999998666 9999999999999999999997 4322 122 3334578
Q ss_pred EEEecCcCcCCC--CcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 263 FLVASSHKMCGP--TGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 263 ~~~~s~~K~~g~--~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
+++. +|.+|. -.+|++++++++++.+.+........ ......+.+..+.+++.++++.+++
T Consensus 286 i~t~--sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~--------------~~~~t~~~np~a~aAa~aaL~~~~~- 348 (476)
T 3i5t_A 286 IITF--AKGVTSGYVPLGGLAISEAVLARISGENAKGSWF--------------TNGYTYSNQPVACAAALANIELMER- 348 (476)
T ss_dssp EEEE--CGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEE--------------CCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred hhhh--hhhhcCCCcCeEEEEECHHHHHHHhcCCcccccc--------------cccCCCCcCHHHHHHHHHHHHHHHh-
Confidence 8765 497654 34799999999988877531100000 0001125567777888888887766
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhh
Q 017640 341 GMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 341 g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+.+.++.+++.+++.+.|.++
T Consensus 349 --~~~~~~~~~~~~~l~~~L~~l 369 (476)
T 3i5t_A 349 --EGIVDQAREMADYFAAALASL 369 (476)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTT
T ss_pred --HHHHHHHHHHHHHHHHHHHHH
Confidence 346677778888888877753
No 227
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.80 E-value=6.3e-19 Score=167.29 Aligned_cols=269 Identities=13% Similarity=-0.053 Sum_probs=172.9
Q ss_pred eEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc-CCCCC-C--cEEEeCC
Q 017640 68 LVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI-NASDS-G--EIVFTKN 137 (368)
Q Consensus 68 ~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-~~~~~-~--~v~~t~g 137 (368)
.|+|.-| +..+..+.|++|.++.++... .+ .|. ....+.++|+++++++ |.... + ..+.|.|
T Consensus 46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~--~~--~Y~----p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~g 117 (420)
T 4h51_A 46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNL--DY--EYL----PISGYQPFIDEAVKIIYGNTVELENLVAVQTLS 117 (420)
T ss_dssp CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTC--CC--CCC----CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEH
T ss_pred CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCC--CC--CCC----CcCChHHHHHHHHHHhcCCCccccccceeeecC
Confidence 5666665 334667889888776665321 11 111 1223447888888765 33211 1 3355789
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCE-EEEEeCC--CCCCCCHHHHHHhcc---cCceE
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGAN-LKFLNLN--DDESPDLDKLKEMLS---RKTKL 211 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~-v~~v~~~--~~~~~d~~~l~~~l~---~~~~~ 211 (368)
+|.|+..++..+.+...++||+|++++|.|+... ..++..|.+ +...+.. .++.+|.+.+.+.+. +++++
T Consensus 118 gtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~----~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~v 193 (420)
T 4h51_A 118 GTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHY----GVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVF 193 (420)
T ss_dssp HHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHH----HHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEE
T ss_pred chHHHHHHHHHHHHhcCCCCCEEEEecCCchhHH----HHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEE
Confidence 9999988887765445789999999999888744 444556876 4444432 346678888877664 46788
Q ss_pred EEEcccccccccccC---HHHHHHHHHhcCCEEEEecCCcC-Ccccc--c-------CCCCCccEEEecCcCcCCCCc--
Q 017640 212 VVIHHISNMLASILP---IEEIVHWSHDVGAKVLVDACQSV-PHMVV--D-------VQGLDADFLVASSHKMCGPTG-- 276 (368)
Q Consensus 212 v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~D~a~~~-~~~~~--~-------~~~~~~d~~~~s~~K~~g~~G-- 276 (368)
++++.|+||||..++ +++|+++|+++++++++|++|.- ..... + .+.....+++.|+||.|+.+|
T Consensus 194 ll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R 273 (420)
T 4h51_A 194 ILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSER 273 (420)
T ss_dssp EEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGC
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCc
Confidence 899999999999999 77999999999999999999862 11100 0 122235688889999999999
Q ss_pred ceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH------HHHHhCHHHHHHHHH
Q 017640 277 IGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAID------YLSTIGMQKIHAYEV 350 (368)
Q Consensus 277 ~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~------~~~~~g~~~i~~~~~ 350 (368)
+|++++..+.++.......--.. ..+.....++..+...+...+. .++. .++.++++.+
T Consensus 274 vG~~~~~~~~~~~~~~~~~~l~~--------------~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~-~~~~m~~r~~ 338 (420)
T 4h51_A 274 AGTLSLLLKDKTKRADVKSVMDS--------------LIREEYTCPPAHGARLAHLILSNNELRKEWEA-ELSAMAERIR 338 (420)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHH--------------HHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHH
T ss_pred eEEEEecccCHHHHHHHHHHHHH--------------hhhcccCcchHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHH
Confidence 99999877655432211100000 0111122455555554444443 1121 3678888888
Q ss_pred HHHHHHHHHHHhh
Q 017640 351 KWIICSIIVIQER 363 (368)
Q Consensus 351 ~l~~~l~~~l~~~ 363 (368)
+.++.+.+.|.+.
T Consensus 339 ~~R~~l~~~L~~~ 351 (420)
T 4h51_A 339 TMRRTVYDELLRL 351 (420)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 8999998888765
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.79 E-value=9.1e-19 Score=165.58 Aligned_cols=231 Identities=11% Similarity=0.073 Sum_probs=159.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEE
Q 017640 106 SAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANL 185 (368)
Q Consensus 106 ~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 185 (368)
++......+.+...+.+++|.+.....++++|+|.++..++.+..+....+++.|+++...|.|+..+ +...|+.+
T Consensus 93 ~~~~~~~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kA----l~l~Gl~p 168 (450)
T 3bc8_A 93 SSLLNKITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKS----MVTAGFEP 168 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHH----HHHTTCEE
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHH----HHHcCCee
Confidence 34455677789999999999987656789999984444444444221122378999999999996554 45569999
Q ss_pred EEEeC---CCCCCCCHHHHHHhccc----CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-cC-
Q 017640 186 KFLNL---NDDESPDLDKLKEMLSR----KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-DV- 256 (368)
Q Consensus 186 ~~v~~---~~~~~~d~~~l~~~l~~----~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~~- 256 (368)
++++. ++.+.+|++.|+++|++ .+.+|+.+...+.+|.+.|+++|+++|++||+++++|+||+...... ++
T Consensus 169 ~~v~~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~ 248 (450)
T 3bc8_A 169 VVIENVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLI 248 (450)
T ss_dssp EEECCEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHH
T ss_pred EEEEeeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHH
Confidence 88876 34578999999999965 33455555555556789999999999999999999999999644321 11
Q ss_pred -C--C-CCccEEEecCcC-cCCCCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHH
Q 017640 257 -Q--G-LDADFLVASSHK-MCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGL 330 (368)
Q Consensus 257 -~--~-~~~d~~~~s~~K-~~g~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~ 330 (368)
. . -+.|+++.|.|| .+.+.|++++++++ +.++.+...+.| ...++| + +.+
T Consensus 249 ~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~~~~g--------------------~~s~Sp---s-L~l 304 (450)
T 3bc8_A 249 QQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPG--------------------RASASP---S-LDV 304 (450)
T ss_dssp HHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHHHSCS--------------------CBCSHH---H-HHH
T ss_pred HHHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHHHHhhc--------------------CCcccH---H-HHH
Confidence 1 1 268999999999 56688899999854 344433322211 011112 2 223
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 331 GAAIDYLSTIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 331 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
..++..+-..++.++.++..++++++.+.|.++.
T Consensus 305 ~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~ 338 (450)
T 3bc8_A 305 LITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLA 338 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 3333333444677777778899999999998887
No 229
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.77 E-value=5e-17 Score=157.23 Aligned_cols=264 Identities=12% Similarity=0.061 Sum_probs=165.1
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHh-hccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAY-NSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNA 138 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~ 138 (368)
++..|+|..+ .|+.++.+.+++.+.+... ..+.. .+. .....+..+.+.+.++++++... +.|+|++|+
T Consensus 61 dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~--~~~-~~~~~~l~~~la~~l~~~~~~~~-~~v~f~~sG 136 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRP--ALG-ILPPENFVEKLRESLLSVAPKGM-SQLITMACG 136 (472)
T ss_dssp TSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCC--CTT-TSCBTTHHHHHHHTGGGGCCTTC-CEEEEESSH
T ss_pred CCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhccccccc--ccc-cccHHHHHHHHHHHHHHhCCCCc-CEEEEeCCc
Confidence 3445777642 4667999999998875432 11110 000 00012333344444555554443 489999999
Q ss_pred HHHHHHHHHHccCC------C---C------------CCC---CEEEEcCCCCcccHHHHHHHHH-----HcCCEE---E
Q 017640 139 TEAINLVAYSWGLS------N---L------------KSG---DEVILTVAEHHSAIVPWQLVAQ-----KTGANL---K 186 (368)
Q Consensus 139 t~a~~~~~~~~~~~------~---~------------~~g---d~vl~~~~~~~s~~~~~~~~~~-----~~g~~v---~ 186 (368)
++|+..+++.+... . . ++| +.|++.++.||+.......+.. ..+... .
T Consensus 137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (472)
T 1ohv_A 137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP 216 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence 99999999876210 0 0 134 8999999999986654433311 112111 1
Q ss_pred EEeCCCC-C-------------CCCHHHHHHhccc------CceEEEEcccccccccccC----HHHHHHHHHhcCCEEE
Q 017640 187 FLNLNDD-E-------------SPDLDKLKEMLSR------KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVL 242 (368)
Q Consensus 187 ~v~~~~~-~-------------~~d~~~l~~~l~~------~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li 242 (368)
.+++... . ..|+++|++++++ ++++|+++.++|++|.+.| +++|.++|++||+++|
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli 296 (472)
T 1ohv_A 217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL 296 (472)
T ss_dssp EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 2222110 0 1268889999876 7899999999999998877 9999999999999999
Q ss_pred EecCCc-CCccc--ccCCCCC----ccEEEecCcCcCCCCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCC
Q 017640 243 VDACQS-VPHMV--VDVQGLD----ADFLVASSHKMCGPTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPS 315 (368)
Q Consensus 243 ~D~a~~-~~~~~--~~~~~~~----~d~~~~s~~K~~g~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~ 315 (368)
+|++|+ +|... +..+.++ +|+++ ++|.+ ..| |+++ ++++. .+.+...
T Consensus 297 ~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t--~sK~~-l~G-G~~~-~~~~~-~~~~~~~-------------------- 350 (472)
T 1ohv_A 297 VDEVQTGGGSTGKFWAHEHWGLDDPADVMT--FSKKM-MTG-GFFH-KEEFR-PNAPYRI-------------------- 350 (472)
T ss_dssp EECTTTTTTTTSSSSGGGGGCCSSCCSEEE--ECGGG-SSE-EEEE-CGGGS-CSSSSSS--------------------
T ss_pred EeCcccCCCCCCCchhccccCCCCCCCEEE--Ecccc-ccC-CccC-chhhc-ccccccc--------------------
Confidence 999998 44431 2333333 78764 55974 223 7766 55542 2222211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 316 RFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 316 ~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+...+.+..+.+++.++++.+.+. .+.++.+++.+++.+.|.++
T Consensus 351 -~~T~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l 394 (472)
T 1ohv_A 351 -FNTWLGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTGLLDL 394 (472)
T ss_dssp -CCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHH
T ss_pred -cCccCccHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHH
Confidence 111245777888888999988763 35678888888888887764
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.76 E-value=5.3e-18 Score=158.46 Aligned_cols=215 Identities=12% Similarity=0.092 Sum_probs=155.5
Q ss_pred HHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC----CCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCC-
Q 017640 117 RKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS----GDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLN- 191 (368)
Q Consensus 117 r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~----gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~- 191 (368)
..+|. .+|.+.....++++|+|.++..++.+. +++ +|.|+++..+|.|++.++. ..|+++++++..
T Consensus 123 ld~L~-~~G~~~~~~~flVnGsTgg~lamilaa----~r~~rpg~d~VIvpRn~HKSv~kAli----L~Gl~Pv~V~p~~ 193 (501)
T 3hl2_A 123 LDIIK-LAGVHTVANCFVVPMATGMSLTLCFLT----LRHKRPKAKYIIWPRIDQKSCFKSMI----TAGFEPVVIENVL 193 (501)
T ss_dssp HHHHH-HTTCTTCCEEEEESSCHHHHHHHHHHH----HHHHCTTCCEEEEECCCCHHHHHHHH----HTTCEEEEECEEE
T ss_pred HHHHH-HcCCCCCCcEEEECcHHHHHHHHHHHH----cCcccCCCCEEEEecchHHHHHHHHH----HcCCeEEEEeeee
Confidence 33344 449986657899999997777766665 342 4999999999999776544 459999999873
Q ss_pred --CCCCCCHHHHHHhcccC---ceEE-EEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccc-c----CCCCC
Q 017640 192 --DDESPDLDKLKEMLSRK---TKLV-VIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVV-D----VQGLD 260 (368)
Q Consensus 192 --~~~~~d~~~l~~~l~~~---~~~v-~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~-~----~~~~~ 260 (368)
+...+|++.++++|++. ..++ +.+.+.+..|.+.|+++|+++|++||+++++|+||+...... + .-..+
T Consensus 194 d~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~G 273 (501)
T 3hl2_A 194 EGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVG 273 (501)
T ss_dssp ETTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHS
T ss_pred cccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcC
Confidence 34678999999999752 2333 343334445567889999999999999999999999654321 1 11235
Q ss_pred -ccEEEecCcC-cCCCCcceEEEEcc-cccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 017640 261 -ADFLVASSHK-MCGPTGIGFLFGKS-DLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYL 337 (368)
Q Consensus 261 -~d~~~~s~~K-~~g~~G~G~l~~~~-~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~ 337 (368)
.|+++.|.|| .+.+-|.|+++.++ ++++.+...+. |+.+....+.+..++..+
T Consensus 274 rAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~yP------------------------Gr~S~Spsldl~~tLL~l 329 (501)
T 3hl2_A 274 RIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYP------------------------GRASASPSLDVLITLLSL 329 (501)
T ss_dssp CCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHHTSC------------------------SCBCSHHHHHHHHHHHHH
T ss_pred CCcEEEecccccceeecCceEEEeCCHHHHHHHHHhCC------------------------CCCCCcHHHHHHHHHHHH
Confidence 9999999999 56677767776655 45555433322 344455556566666666
Q ss_pred HHhCHHHHHHHHHHHHHHHHHHHHhhc
Q 017640 338 STIGMQKIHAYEVKWIICSIIVIQERH 364 (368)
Q Consensus 338 ~~~g~~~i~~~~~~l~~~l~~~l~~~~ 364 (368)
-..|++++.++..++++|+.++|+++.
T Consensus 330 Gr~Gy~~ll~e~~ela~~L~~~L~~la 356 (501)
T 3hl2_A 330 GSNGYKKLLKERKEMFSYLSNQIKKLS 356 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777899999999999999999999864
No 231
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.61 E-value=7e-20 Score=175.83 Aligned_cols=246 Identities=15% Similarity=0.114 Sum_probs=167.2
Q ss_pred CCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCC
Q 017640 77 SQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKS 156 (368)
Q Consensus 77 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~ 156 (368)
|+.+|.|.+++.+.+..... . ....+...++.+.|+++++ .. +.++|++|+++|+..+++.++ ....
T Consensus 115 Gh~~p~V~~Av~~q~~~~~~-------~--~~~~~~~~~Lae~L~~~~p-~~-~~v~~~nSGseA~~~Aik~ar--~~tg 181 (465)
T 2yky_A 115 GHSHPVIRAAVERALAVGLN-------L--STQTENEALFAEAVCDRFP-SI-DLVRFTNSGTEANLMALATAT--AITG 181 (465)
Confidence 45689999999888765211 0 1124556689999999995 22 389999999999999998652 1356
Q ss_pred CCEEEEcCCCCcccHHHHHHHHHHcCC--EEEEEeCCCCCCCCHHHHHHhcc---cCceEEEEcccccccccccC----H
Q 017640 157 GDEVILTVAEHHSAIVPWQLVAQKTGA--NLKFLNLNDDESPDLDKLKEMLS---RKTKLVVIHHISNMLASILP----I 227 (368)
Q Consensus 157 gd~vl~~~~~~~s~~~~~~~~~~~~g~--~v~~v~~~~~~~~d~~~l~~~l~---~~~~~v~~~~~~n~tG~~~~----l 227 (368)
++.|++.++.|++.......-....|. .+..++.+ |+++|+++++ +++++|+++.+++++|.+.| +
T Consensus 182 r~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~-----d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l 256 (465)
T 2yky_A 182 RKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYN-----DVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFL 256 (465)
Confidence 689999999998755432210011233 33344432 7899999997 57899999888888998887 9
Q ss_pred HHHHHHHHhcCCEEEEecCCcCCccc--ccCC--CCCccEEEecCcCcCCCCc--ceEEEEcccccccCCCcccCCccee
Q 017640 228 EEIVHWSHDVGAKVLVDACQSVPHMV--VDVQ--GLDADFLVASSHKMCGPTG--IGFLFGKSDLLSAMPPFLGGGEMIS 301 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~~~~~~~--~~~~--~~~~d~~~~s~~K~~g~~G--~G~l~~~~~li~~l~~~~~g~~~~~ 301 (368)
++|.++|++||+++|+|++|+ +... ...+ ...+|++ +++|.+|+ | +|++++++++++.+.+...|...
T Consensus 257 ~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~--t~sK~lg~-G~piG~v~~~~~i~~~l~~~~~g~~~-- 330 (465)
T 2yky_A 257 DLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLT--TLGKYIGG-GMSFGAFGGRRDLMERFDPARDGAFA-- 330 (465)
Confidence 999999999999999999999 4321 1111 2235654 67898876 5 89999999998887762111000
Q ss_pred ecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 302 DVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
.....+.|..+.++..++++.+++. .+.++..++.+++.+.|.+.
T Consensus 331 --------------~~~T~~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 2yky_A 331 --------------HAGTFNNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRI 375 (465)
Confidence 0011144556666777778877663 45667777777777766554
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.68 E-value=4.3e-16 Score=148.60 Aligned_cols=255 Identities=13% Similarity=0.127 Sum_probs=171.6
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|+|..+ .|+.+|.|.+++.+++..... .+.+ .....++.+.|++.+..- +.|.|++++|
T Consensus 85 dG~~ylD~~~g~~~~~lGH~hp~v~~Av~~q~~~~~~---~~~~------~~~~~~lae~l~~~~p~~--~~v~f~~SGs 153 (454)
T 4ao9_A 85 DGHRYADFIAEYTAGVYGHSAPEIRDAVIEAMQGGIN---LTGH------NLLEGRLARLICERFPQI--EQLRFTNSGT 153 (454)
T ss_dssp TCCEEEESSGGGGTTTTCSCCHHHHHHHHHHHHTCSC---CCSE------ESSHHHHHHHHHHHSTTC--SEEEEESSHH
T ss_pred CCCEEEEccccHHhhcccCCCHHHHHHHHHHHhcCCC---ccCC------cHHHHHHHHHHHHhCCCC--CEEEEeCchH
Confidence 4556787642 457899999999998875321 1111 112336778888888632 4899999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHH--HHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEE
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVA--QKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVI 214 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~--~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~ 214 (368)
+|++.+++..+. ...+++|+..+.+|++......... .........+|.+ |++.+++.++. ++.+|++
T Consensus 154 EA~e~AiklAr~--~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~n-----d~~~l~~~l~~~~~~iAavIv 226 (454)
T 4ao9_A 154 EANLMALTAALH--FTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYN-----DAQTARAQIERHGPEIAVVLV 226 (454)
T ss_dssp HHHHHHHHHHHH--HHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTT-----CHHHHHHHHHHTGGGEEEEEE
T ss_pred HHHHHHHHHHHh--cccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCc-----hHHHHHHHHhhcCCceEEEEe
Confidence 999999987632 3456789999988887432211100 0011234455544 88999888864 5789999
Q ss_pred cccccccccccC----HHHHHHHHHhcCCEEEEecCCcCCccc----ccCCCCCccEEEecCcCcCC-CCcceEEEEccc
Q 017640 215 HHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSVPHMV----VDVQGLDADFLVASSHKMCG-PTGIGFLFGKSD 285 (368)
Q Consensus 215 ~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~~~~~----~~~~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~ 285 (368)
+.+....|.+.| +++|.++|++||+++|+||++. |..- .+.....+|+++.+ |.+| +..+|.+.++++
T Consensus 227 EPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t~g--K~lggG~Piga~~~~~e 303 (454)
T 4ao9_A 227 EPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTTLG--KYIGGGMSFGAFGGRAD 303 (454)
T ss_dssp CSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHH
T ss_pred ccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEEec--cccCCCCcceeeeeHHH
Confidence 999999999988 9999999999999999999997 4221 11123458998776 8544 334899999999
Q ss_pred ccccCCCcccCCcceeecccCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 286 LLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAG--TPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 286 li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g--t~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+.+.... .+..+ +.|..+.++..++|+.+++ +.+.+++.++.+++.+.|+++
T Consensus 304 i~~~~~~~~~~-------------------~~h~~T~~gnPla~AAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l 361 (454)
T 4ao9_A 304 VMALFDPRTGP-------------------LAHSGTFNNNVMTMAAGYAGLTKLFT---PEAAGALAERGEALRARLNAL 361 (454)
T ss_dssp HHGGGCTTTCS-------------------CCCCCTTTTCHHHHHHHHHHHHHTSC---HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCC-------------------ccccCCCCCCHHHHHHHHHHHHHHhc---cChhHHHHHHHHHHHHHHHHH
Confidence 98877643210 01122 3455566666666666654 556777778888888777654
No 233
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.66 E-value=1.8e-14 Score=137.94 Aligned_cols=263 Identities=16% Similarity=0.177 Sum_probs=174.8
Q ss_pred CCeEEeccC------CCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNA------ATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++--|||.. ..|+.+|.+.+++++.+..+........ ..+...++.+.|++++..+..+.++|+++++
T Consensus 62 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~------~~~~~~~lae~L~~~~p~~~~~~v~f~~sGs 135 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFTHTCFMVT------PYEGYVAVTEQLNRLTPGDHAKRTVLFNSGA 135 (456)
T ss_dssp TSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCTTTTS------CCHHHHHHHHHHHHHSSCSSCEEEEEESSHH
T ss_pred CCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhccCcccCcc------CcHHHHHHHHHHHHhCCCCCCcEEEEeCChH
Confidence 455688864 3567899999999998887532211100 1233346778888888754334789999999
Q ss_pred HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHH----------cCCEEEEEeCCCC------CCCCHHHHHH
Q 017640 140 EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQK----------TGANLKFLNLNDD------ESPDLDKLKE 203 (368)
Q Consensus 140 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~----------~g~~v~~v~~~~~------~~~d~~~l~~ 203 (368)
+|++.+++..+. ...++.|+....+||+........... ....+..+|.... ...+.+.+++
T Consensus 136 EA~e~AlklAr~--~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 213 (456)
T 4atq_A 136 EAVENAVKVARL--ATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKR 213 (456)
T ss_dssp HHHHHHHHHHHH--HHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHH
T ss_pred HHHHHHHHHHhh--hhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHH
Confidence 999999987532 345678999999999876543332110 0123455554311 1112333332
Q ss_pred -------hcc-cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCcC-Ccc----cccCCCCCccEEEe
Q 017640 204 -------MLS-RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQSV-PHM----VVDVQGLDADFLVA 266 (368)
Q Consensus 204 -------~l~-~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~~-~~~----~~~~~~~~~d~~~~ 266 (368)
.+. .++.+|+++.++...|.+.| +++|.++|++||+++|+||++.- |.. ..+.....+|+++.
T Consensus 214 ~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~ 293 (456)
T 4atq_A 214 AITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITM 293 (456)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEE
T ss_pred HHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhh
Confidence 222 25789999999999998877 99999999999999999999872 322 12223346999988
Q ss_pred cCcCcCC-CCcceEEEEcccccccCCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHH
Q 017640 267 SSHKMCG-PTGIGFLFGKSDLLSAMPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKI 345 (368)
Q Consensus 267 s~~K~~g-~~G~G~l~~~~~li~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i 345 (368)
+ |.+| ...+|.+++++++.+.+.+...++++ +.|..+.++..++|+.+++.+ +
T Consensus 294 g--K~lggg~P~~av~~~~~i~~~~~~~~~~~Tf---------------------~gnpla~aaala~L~~i~~~~---l 347 (456)
T 4atq_A 294 A--KGIAGGLPLSAITGRADLLDAVHPGGLGGTY---------------------GGNPVACAAALAAIDTMEQHD---L 347 (456)
T ss_dssp C--GGGGTTSSCEEEEEEHHHHTTSCTTSSCCSS---------------------SSCHHHHHHHHHHHHHHHHTT---H
T ss_pred h--hcccCcCCceeeEecHHHHhcccccCCCCCC---------------------CCChHHHHhhHHHHHHHhhcc---H
Confidence 7 8544 33389999999988877765443322 567778888888899888754 4
Q ss_pred HHHHHHHHHHHHHHHHh
Q 017640 346 HAYEVKWIICSIIVIQE 362 (368)
Q Consensus 346 ~~~~~~l~~~l~~~l~~ 362 (368)
.++.+++.+++.+.|++
T Consensus 348 ~~~~~~~g~~l~~~L~~ 364 (456)
T 4atq_A 348 NGRARHIEELALGKLRE 364 (456)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45566666666665554
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.66 E-value=4e-15 Score=138.57 Aligned_cols=279 Identities=14% Similarity=0.100 Sum_probs=169.3
Q ss_pred EEeccCCCCCCcHHHHHHHHHHHHHhh--ccCCCCcchhhHHH-HHHHHHHHHHHHHHcCCCCCCc-E-EEeCCHHHHHH
Q 017640 69 VYLDNAATSQKPIAVLKALQNYYEAYN--SNVHRGIHFLSAKA-TDEYELARKKVAAFINASDSGE-I-VFTKNATEAIN 143 (368)
Q Consensus 69 i~l~~~~~~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~r~~la~~~~~~~~~~-v-~~t~g~t~a~~ 143 (368)
+.|=... ...++.|.+++...+..-+ ++|.. .++.|-.. .+...-.+++..++||++..+. | |-..|++.|+.
T Consensus 57 ieLIASE-N~~S~aV~~a~gS~ltnKYaEGyPg~-RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~ 134 (490)
T 3ou5_A 57 LELIASE-NFCSRAALEALGSCLNNKYSEGYPGK-RYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANL 134 (490)
T ss_dssp EECCTTC-CCCCHHHHHHHTSGGGTCCCCC-----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHH
T ss_pred ceEecCC-CcCCHHHHHHhcCcccccccCCCCCc-cccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHH
Confidence 4444333 4678899999877766522 23322 23333333 3444557788999999986532 2 33357778999
Q ss_pred HHHHHccCCCCCCCCEEEEcCCCCcccHHHHH----HHHHHcCC--EEEEEeCC-CCCCCCHHHHHHhccc-CceEEEEc
Q 017640 144 LVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQ----LVAQKTGA--NLKFLNLN-DDESPDLDKLKEMLSR-KTKLVVIH 215 (368)
Q Consensus 144 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~----~~~~~~g~--~v~~v~~~-~~~~~d~~~l~~~l~~-~~~~v~~~ 215 (368)
.+..++ ++|||+|+..+..|.+...--. .-....|. +...++++ +++.||.+.+++.... +|++|++.
T Consensus 135 avy~Al----l~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G 210 (490)
T 3ou5_A 135 AVYTAL----LQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAG 210 (490)
T ss_dssp HHHHHH----CC-CCCEECBC----------------------------CBCEETTTTEECHHHHHHHHHHHCCSEEEEC
T ss_pred HHHHHH----cCCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCCCcccHHHHHHHHhhcCCCeEEEC
Confidence 999999 9999999998887776542110 01111232 23334444 4588999999987754 89999988
Q ss_pred ccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc-----cccCCCCCccEEEecCcCcC-CCCcceEEEEccccccc
Q 017640 216 HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM-----VVDVQGLDADFLVASSHKMC-GPTGIGFLFGKSDLLSA 289 (368)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~-----~~~~~~~~~d~~~~s~~K~~-g~~G~G~l~~~~~li~~ 289 (368)
...+| ..+|++++.++|++.|.++++|.+|-.|-+ +-.++ .+|++++|.||.+ ||.| |+++++++....
T Consensus 211 ~SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~--~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~~ 285 (490)
T 3ou5_A 211 TSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HADIVTTTTHKTLRGARS-GLIFYRKGVKAV 285 (490)
T ss_dssp CSSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG--TCSEEEEESSSTTCSCSC-EEEEEECSEEEE
T ss_pred CccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccc--cceEEeccccccccCCCc-eEEEeccccccc
Confidence 87766 578899999999999999999999985433 22222 4899999999955 6665 999998854211
Q ss_pred CCCcccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 290 MPPFLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 290 l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
-... . ......+. ......-.--..|.|....++|.+.++....+...+...+++.++++.+.+.|.+.
T Consensus 286 ~~k~-~--~~~~~~~~--kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~ 354 (490)
T 3ou5_A 286 DPKT-G--REIPYTFE--DRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER 354 (490)
T ss_dssp CC---C--CEEECCCH--HHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccc-c--chhHHHHH--HHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC
Confidence 0000 0 00000000 00000000012467888899999988887655556778888899999999988875
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.57 E-value=9.9e-14 Score=133.31 Aligned_cols=266 Identities=12% Similarity=0.079 Sum_probs=171.2
Q ss_pred CCeEEeccCC------CCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHH
Q 017640 66 KKLVYLDNAA------TSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNAT 139 (368)
Q Consensus 66 ~~~i~l~~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t 139 (368)
++.-|||..+ .|...|.+.+++.+.+..+.... ..... ..+...++.++|++....+-+ .|.|++|++
T Consensus 65 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~---~~~~~--~~~~~~~lAe~L~~~~p~~~~-~v~f~~sGs 138 (473)
T 4e3q_A 65 NGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYH---AFFGR--MSDQTVMLSEKLVEVSPFDSG-RVFYTNSGS 138 (473)
T ss_dssp TCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCC---CCTTE--EEHHHHHHHHHHHHHSSCSSC-EEEEESSHH
T ss_pred CCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhccccc---ccccc--cCHHHHHHHHHHHhhCCCCcc-EEEEeCchH
Confidence 4556888643 45779999999999988753211 11100 122333678888888876543 899999999
Q ss_pred HHHHHHHHHccCC---C-CCCCCEEEEcCCCCcccHHHHHHHHH-----HcC---CEEEEEeCC------CCCCC-----
Q 017640 140 EAINLVAYSWGLS---N-LKSGDEVILTVAEHHSAIVPWQLVAQ-----KTG---ANLKFLNLN------DDESP----- 196 (368)
Q Consensus 140 ~a~~~~~~~~~~~---~-~~~gd~vl~~~~~~~s~~~~~~~~~~-----~~g---~~v~~v~~~------~~~~~----- 196 (368)
+|++.+++..... . -....+|+....+||+.......... ..+ .....++.. ..+..
T Consensus 139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 218 (473)
T 4e3q_A 139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV 218 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence 9999999864211 1 12345788889999986543333211 011 112333322 11111
Q ss_pred --CHHHHHHhcc----cCceEEEEcccccccccccC----HHHHHHHHHhcCCEEEEecCCc-CCcc----cccCCCCCc
Q 017640 197 --DLDKLKEMLS----RKTKLVVIHHISNMLASILP----IEEIVHWSHDVGAKVLVDACQS-VPHM----VVDVQGLDA 261 (368)
Q Consensus 197 --d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~li~D~a~~-~~~~----~~~~~~~~~ 261 (368)
..+++++.+. +++.+|+++.++...|.+.| +++|.++|++||+++|+||++. +|.. ..+.....+
T Consensus 219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~P 298 (473)
T 4e3q_A 219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTP 298 (473)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCC
Confidence 1233444443 35689999999999998887 9999999999999999999987 3332 112233469
Q ss_pred cEEEecCcCcCCC--CcceEEEEcccccccCCC-------cccCCcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 017640 262 DFLVASSHKMCGP--TGIGFLFGKSDLLSAMPP-------FLGGGEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGA 332 (368)
Q Consensus 262 d~~~~s~~K~~g~--~G~G~l~~~~~li~~l~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~ 332 (368)
|+++.+ |.++. ..+|.+++++++.+.+.+ ...|++ .+-|..+.++..+
T Consensus 299 Di~t~~--K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T---------------------~~Gnpla~Aaala 355 (473)
T 4e3q_A 299 DAIISS--KNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFT---------------------ASGHPVGCAIALK 355 (473)
T ss_dssp SEEEEC--GGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCT---------------------TTTCHHHHHHHHH
T ss_pred ChHHhc--ccccCCCCCcccccccHHHHHHhccccccccccccCCC---------------------CCCCcchhhhhhh
Confidence 999877 95543 338999999988765432 222211 1556677777778
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHhh
Q 017640 333 AIDYLSTIGMQKIHAYEVKWIICSIIVIQER 363 (368)
Q Consensus 333 al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~ 363 (368)
+++.+++. .+.++++++.+++.+.|+++
T Consensus 356 ~L~~i~~~---~l~~~~~~~g~~l~~~L~~l 383 (473)
T 4e3q_A 356 AIDVVMNE---GLAENVRRLAPRFEERLKHI 383 (473)
T ss_dssp HHHHHHHS---SHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccc---cHHHHHHHHHHHHHHHHHHH
Confidence 88888774 45566777777777777654
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.27 E-value=1.4e-10 Score=118.59 Aligned_cols=249 Identities=10% Similarity=0.050 Sum_probs=155.0
Q ss_pred EEeccCC------CCCC-cHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHH
Q 017640 69 VYLDNAA------TSQK-PIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFINASDSGEIVFTKNATEA 141 (368)
Q Consensus 69 i~l~~~~------~~~~-~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 141 (368)
-|||..+ .|+. .|.+.+++.+++..+......+. ..+...++.++|+++++.+.-+.|+|++|+++|
T Consensus 381 ~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~------~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA 454 (831)
T 4a0g_A 381 QQFDACASWWTQGPDPTFQAELAREMGYTAARFGHVMFPEN------VYEPALKCAELLLDGVGKGWASRVYFSDNGSTA 454 (831)
T ss_dssp EEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTE------ECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHH
T ss_pred heeeecccHhhcCCCCCCCHHHHHHHHHHHhhccccccccc------CCHHHHHHHHHHHHhCCCCCCCEEEECCChhHH
Confidence 4777643 4566 89999999999887643211111 123334788999999875422489999999999
Q ss_pred HHHHHHHc-cCCCCC------------CCCEEEEcCCCCcccHHHHHHHHHH---c---------CCEE-----------
Q 017640 142 INLVAYSW-GLSNLK------------SGDEVILTVAEHHSAIVPWQLVAQK---T---------GANL----------- 185 (368)
Q Consensus 142 ~~~~~~~~-~~~~~~------------~gd~vl~~~~~~~s~~~~~~~~~~~---~---------g~~v----------- 185 (368)
++.+++.. +..... ...+|+.....||+.......+... . +..+
T Consensus 455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 534 (831)
T 4a0g_A 455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN 534 (831)
T ss_dssp HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence 99998865 111011 1346888888888765444333210 0 1000
Q ss_pred --EEEeCCCCCC---------CC------------------HHHHHHhcc--------cCceEEEEccc-ccccccccC-
Q 017640 186 --KFLNLNDDES---------PD------------------LDKLKEMLS--------RKTKLVVIHHI-SNMLASILP- 226 (368)
Q Consensus 186 --~~v~~~~~~~---------~d------------------~~~l~~~l~--------~~~~~v~~~~~-~n~tG~~~~- 226 (368)
..++...... -| .+.|++.|+ .++++|+++.. ++..|.+.+
T Consensus 535 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~ 614 (831)
T 4a0g_A 535 GSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD 614 (831)
T ss_dssp TEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred CceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence 1122221100 01 256777775 24689999996 898898876
Q ss_pred ---HHHHHHHHHhcCCEEEEecCCc-CCccc--c--cCCCCCccEEEecCcCcCCCC--cceEEEEcccccccCCCcccC
Q 017640 227 ---IEEIVHWSHDVGAKVLVDACQS-VPHMV--V--DVQGLDADFLVASSHKMCGPT--GIGFLFGKSDLLSAMPPFLGG 296 (368)
Q Consensus 227 ---l~~i~~l~~~~g~~li~D~a~~-~~~~~--~--~~~~~~~d~~~~s~~K~~g~~--G~G~l~~~~~li~~l~~~~~g 296 (368)
+++|.++|++||+++|+||++. +|..- + +.....+|+++ ++|.+|.. .+|++++++++++.+.+....
T Consensus 615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDiit--lsK~L~gG~~Plgav~~~~~i~~~~~~~~~~ 692 (831)
T 4a0g_A 615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIAC--FAKLLTGGMVPLAVTLATDAVFDSFSGDSKL 692 (831)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSCCSEEE--ECGGGGTTSSCCEEEEECHHHHHTTCSSCGG
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCCCcEEE--EecccccCccCcEEEEECHHHHHHHhccccc
Confidence 8999999999999999999987 43321 1 11223588876 55976542 379999999988877642100
Q ss_pred CcceeecccCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHh
Q 017640 297 GEMISDVFLDHSTFADPPSRFEAGTPAIGEAIGLGAAIDYLSTI 340 (368)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~~al~~~~~~ 340 (368)
... . .. ...+.+..+.+++.++++.+++.
T Consensus 693 ~~~-----~---------hg-~T~~g~Pla~Aaala~L~~i~~~ 721 (831)
T 4a0g_A 693 KAL-----L---------HG-HSYSAHAMGCATAAKAIQWFKDP 721 (831)
T ss_dssp GSC-----C---------CC-CTTTTCHHHHHHHHHHHHHHHCT
T ss_pred ccc-----e---------ee-cCCcccHHHHHHHHHHHHHHHhh
Confidence 000 0 00 11256777777888888888754
No 237
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=61.02 E-value=13 Score=30.59 Aligned_cols=35 Identities=9% Similarity=0.306 Sum_probs=29.8
Q ss_pred CceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+..|+++-..|..|......++.+++++||+.++
T Consensus 159 ~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~ii 193 (204)
T 1tks_A 159 QPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKII 193 (204)
T ss_dssp CSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEE
T ss_pred CceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEE
Confidence 56777766666889999999999999999998776
No 238
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=52.43 E-value=41 Score=28.31 Aligned_cols=92 Identities=13% Similarity=0.056 Sum_probs=51.3
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
|+++..+.+.. ..|..|++..+.-..-+ . ..+..+.|.++..+++.. .+++.+.+ .+..+|++.-.+
T Consensus 34 T~lL~~~~r~~-----~~g~kvli~kp~~D~Ry-g-~~i~sr~G~~~~a~~i~~-----~~di~~~~-~~~dvViIDEaQ 100 (234)
T 2orv_A 34 TELMRRVRRFQ-----IAQYKCLVIKYAKDTRY-S-SSFCTHDRNTMEALPACL-----LRDVAQEA-LGVAVIGIDEGQ 100 (234)
T ss_dssp HHHHHHHHHHH-----TTTCCEEEEEETTCCCC-------------CEEEEESS-----GGGGHHHH-TTCSEEEESSGG
T ss_pred HHHHHHHHHHH-----HCCCeEEEEeecCCccc-h-HHHHhhcCCeeEEEecCC-----HHHHHHHh-ccCCEEEEEchh
Confidence 57777777764 34556665554332211 2 233444576666655442 12233333 456899999988
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
..++ +.++.++....|+.||+=+-.
T Consensus 101 F~~~----v~el~~~l~~~gi~VI~~GL~ 125 (234)
T 2orv_A 101 FFPD----IVEFCEAMANAGKTVIVAALD 125 (234)
T ss_dssp GCTT----HHHHHHHHHHTTCEEEEECCS
T ss_pred hhhh----HHHHHHHHHhCCCEEEEEecc
Confidence 8764 788888888899999986654
No 239
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=48.98 E-value=17 Score=29.65 Aligned_cols=66 Identities=9% Similarity=0.238 Sum_probs=46.0
Q ss_pred CHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC--CEEEEecCCcCCcccccC----CCCCccEEEec
Q 017640 197 DLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG--AKVLVDACQSVPHMVVDV----QGLDADFLVAS 267 (368)
Q Consensus 197 d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g--~~li~D~a~~~~~~~~~~----~~~~~d~~~~s 267 (368)
|.++|+++++.....+++-. |.+..++++.+.++++| ++++.|-+.+++.-...+ ...++|.++++
T Consensus 18 ~~~~l~~al~s~~~~ifll~-----g~i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsT 89 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVMLE-----THVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIIST 89 (192)
T ss_dssp SSHHHHHHTTSSCCEEEECS-----EETTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEES
T ss_pred CHHHHHHHHcCCCCEEEEec-----CcHHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEeC
Confidence 67899999987777766643 56788999999999998 556778777765432111 12356666665
No 240
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=48.62 E-value=59 Score=25.66 Aligned_cols=35 Identities=6% Similarity=0.026 Sum_probs=23.3
Q ss_pred hcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 204 MLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 204 ~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+.++.-+|+++. +|....+-++++.++++|+.++
T Consensus 84 ~~~~~d~~i~iS~----sG~t~~~~~~~~~ak~~g~~vi 118 (187)
T 3sho_A 84 NLRPTDLMIGVSV----WRYLRDTVAALAGAAERGVPTM 118 (187)
T ss_dssp TCCTTEEEEEECC----SSCCHHHHHHHHHHHHTTCCEE
T ss_pred cCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEE
Confidence 3445555566655 4666667788899999986543
No 241
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=43.90 E-value=44 Score=27.49 Aligned_cols=35 Identities=9% Similarity=0.175 Sum_probs=28.1
Q ss_pred CceEEEEccc-ccccccccCHHHHHHHHHhcCCEEE
Q 017640 208 KTKLVVIHHI-SNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 208 ~~~~v~~~~~-~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+..|+++-. .|..|......++.+++++||+.++
T Consensus 158 ~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~i 193 (206)
T 3mio_A 158 QPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALI 193 (206)
T ss_dssp CSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEE
T ss_pred CceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 4566655552 6778999999999999999998876
No 242
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=42.45 E-value=1.8e+02 Score=25.61 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=52.0
Q ss_pred CcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcC--CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc
Q 017640 130 GEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTV--AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR 207 (368)
Q Consensus 130 ~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~--~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~ 207 (368)
.++++|.+.+.....++.... ..++.-.|++.+ |.+.+... ...+ ...|+.+..++.. .+-..+..
T Consensus 122 g~~ILTh~~S~tv~~~l~~A~--~~gk~~~V~v~EsrP~~qG~~l-a~~L-~~~gI~vtli~Ds--------a~~~~m~~ 189 (315)
T 3ecs_A 122 GATILTHAYSRVVLRVLEAAV--AAKKRFSVYVTESQPDLSGKKM-AKAL-CHLNVPVTVVLDA--------AVGYIMEK 189 (315)
T ss_dssp TEEEEECSCCHHHHHHHHHHH--TTTCCEEEEEECCTTTTHHHHH-HHHH-HTTTCCEEEECGG--------GHHHHGGG
T ss_pred CCEEEEcCCcHHHHHHHHHHH--HcCCeEEEEEecCCCcchHHHH-HHHH-HHcCCCEEEEehh--------HHHHHHHh
Confidence 377888554444444444431 112223555553 33334332 2333 4458888887632 22223332
Q ss_pred CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEE
Q 017640 208 KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~ 243 (368)
-.++++=...-...|.+.. --.++-+|+.||+++++
T Consensus 190 vd~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V 228 (315)
T 3ecs_A 190 ADLVIVGAEGVVENGGIINKIGTNQMAVCAKAQNKPFYV 228 (315)
T ss_dssp CSEEEEECSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred CCEEEECceEEecCCCeeehhhhHHHHHHHHHhCCCEEE
Confidence 2233333332334455554 45688889999988876
No 243
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=41.22 E-value=1.8e+02 Score=27.01 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHcCCC--------CCCcEEEe-C---CHHHHHHHHHHHccCCCCCCCCEEE-Ec-CCCCcccHHHHH
Q 017640 110 TDEYELARKKVAAFINAS--------DSGEIVFT-K---NATEAINLVAYSWGLSNLKSGDEVI-LT-VAEHHSAIVPWQ 175 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~--------~~~~v~~t-~---g~t~a~~~~~~~~~~~~~~~gd~vl-~~-~~~~~s~~~~~~ 175 (368)
....+.+++.+.++++.. .+.-|+++ . |=|..+..++..+ .+.|..|+ +. ++..++....+.
T Consensus 73 ~~v~~~l~~eL~~~L~~~~~~~~~~~~p~vIlivG~~G~GKTTt~~kLA~~l----~~~G~kVllv~~D~~R~aa~eqL~ 148 (443)
T 3dm5_A 73 EHIIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGIQGSGKTTTVAKLARYF----QKRGYKVGVVCSDTWRPGAYHQLR 148 (443)
T ss_dssp HHHHHHHHHHHHHHTTSSCCCCCCCSSSEEEEEECCTTSSHHHHHHHHHHHH----HTTTCCEEEEECCCSSTHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcccccccCCCCeEEEEECcCCCCHHHHHHHHHHHH----HHCCCeEEEEeCCCcchhHHHHHH
Confidence 455667888888888742 12123333 1 2244444444445 34455443 33 444455566667
Q ss_pred HHHHHcCCEEEEEeCCCCCCCCHHHH-----HHhcccCceEEEEccccccccccc-C---HHHH---HHHHHhcCCEEEE
Q 017640 176 LVAQKTGANLKFLNLNDDESPDLDKL-----KEMLSRKTKLVVIHHISNMLASIL-P---IEEI---VHWSHDVGAKVLV 243 (368)
Q Consensus 176 ~~~~~~g~~v~~v~~~~~~~~d~~~l-----~~~l~~~~~~v~~~~~~n~tG~~~-~---l~~i---~~l~~~~g~~li~ 243 (368)
.+++..|..+..... + .|+..+ +.+-..+..+|++..+ |... + +.++ .+..+.+.+++++
T Consensus 149 ~~~~~~gvpv~~~~~---~-~dp~~i~~~al~~a~~~~~DvVIIDTa----Grl~~d~~lm~el~~i~~~~~pd~vlLVv 220 (443)
T 3dm5_A 149 QLLDRYHIEVFGNPQ---E-KDAIKLAKEGVDYFKSKGVDIIIVDTA----GRHKEDKALIEEMKQISNVIHPHEVILVI 220 (443)
T ss_dssp HHHGGGTCEEECCTT---C-CCHHHHHHHHHHHHHHTTCSEEEEECC----CCSSCCHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred HHHHhcCCcEEecCC---C-CCHHHHHHHHHHHHHhCCCCEEEEECC----CcccchHHHHHHHHHHHHhhcCceEEEEE
Confidence 777777766543221 1 244332 2332335688888876 3222 1 3333 3344446689999
Q ss_pred ecCCc
Q 017640 244 DACQS 248 (368)
Q Consensus 244 D~a~~ 248 (368)
|+..+
T Consensus 221 DA~~g 225 (443)
T 3dm5_A 221 DGTIG 225 (443)
T ss_dssp EGGGG
T ss_pred eCCCc
Confidence 98864
No 244
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=40.84 E-value=83 Score=28.00 Aligned_cols=65 Identities=17% Similarity=0.151 Sum_probs=35.0
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
-....+....+..|.+.+.+|+. .+.+.. .... ..-++.+ .--++++++.|+++|+.+|+|--+.
T Consensus 43 ~~t~~m~~~i~~~G~N~vRipi~------w~~~~~---~~~~-----g~~~~~~-l~~ld~vV~~a~~~Gi~vIlDlH~~ 107 (340)
T 3qr3_A 43 DGIGQMQHFVNEDGMTIFRLPVG------WQYLVN---NNLG-----GNLDSTS-ISKYDQLVQGCLSLGAYCIVDIHNY 107 (340)
T ss_dssp CHHHHHHHHHHHHCCCEEEEEEC------HHHHTT---TCTT-----CCCCHHH-HHHHHHHHHHHHHTTCEEEEEECST
T ss_pred ccHHHHHHHHHHCCCCEEEEEee------HHHhCC---CCCC-----CccCHHH-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 34455666667779999999985 222110 0000 0001110 1116677777777777777776544
No 245
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=40.06 E-value=55 Score=27.16 Aligned_cols=34 Identities=12% Similarity=0.117 Sum_probs=27.2
Q ss_pred CceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+..|+++-. |..|......++.+++++||+.++
T Consensus 167 ~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~i 200 (217)
T 1g57_A 167 KPAGVLCELT-NDDGTMARAPECIEFANKHNMALV 200 (217)
T ss_dssp CSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEE
Confidence 4566655543 778999999999999999998776
No 246
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=39.10 E-value=17 Score=34.01 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=27.4
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
+.+..|...+++++++-||++|+.||+|.+.
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred eCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4556788888999999999999999999994
No 247
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=38.59 E-value=1.4e+02 Score=24.97 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=56.0
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEc---CC-C------CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHH
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILT---VA-E------HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDK 200 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~---~~-~------~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~ 200 (368)
-++..+|+-.+...+..+. +.|-.|... .+ . |.......+..|+..|+....+++.....--.++
T Consensus 7 vvvl~SGGkDSs~al~~l~-----~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~ 81 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-----KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVED 81 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-----HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHH
T ss_pred EEEEecCcHHHHHHHHHHH-----HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHH
Confidence 4567788877777766543 345444211 11 0 1112234667788889998888876432223677
Q ss_pred HHHhccc-CceEEEEcccccccccccC---HHHHHHHHHhcCCEEEE
Q 017640 201 LKEMLSR-KTKLVVIHHISNMLASILP---IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 201 l~~~l~~-~~~~v~~~~~~n~tG~~~~---l~~i~~l~~~~g~~li~ 243 (368)
+.+++.. ....++ +|.+.. -..+...|.+.|+..+.
T Consensus 82 l~~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~~ 121 (237)
T 3rjz_A 82 LKRVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVYT 121 (237)
T ss_dssp HHHHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEEc
Confidence 7777754 344454 444443 45777888888877663
No 248
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=38.26 E-value=85 Score=26.96 Aligned_cols=83 Identities=14% Similarity=0.242 Sum_probs=48.7
Q ss_pred cEEEeCCHHHHHHHHHH-HccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc--
Q 017640 131 EIVFTKNATEAINLVAY-SWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-- 207 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~-~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-- 207 (368)
.+++.+|++.+|=.++. .| .+.|-.|++..- ........++..|.+...+..|-. |.+++++.++.
T Consensus 30 KvalVTGas~GIG~aiA~~l----a~~Ga~V~i~~r----~~~~l~~~~~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRF----VAEGARVFITGR----RKDVLDAAIAEIGGGAVGIQADSA---NLAELDRLYEKVK 98 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHH----HHTTCEEEEEES----CHHHHHHHHHHHCTTCEEEECCTT---CHHHHHHHHHHHH
T ss_pred CEEEEeCcCCHHHHHHHHHH----HHCCCEEEEEEC----CHHHHHHHHHHcCCCeEEEEecCC---CHHHHHHHHHHHH
Confidence 56555555566655443 34 678888887765 445566666777877777776533 55666555432
Q ss_pred ----CceEEEEcccccccccc
Q 017640 208 ----KTKLVVIHHISNMLASI 224 (368)
Q Consensus 208 ----~~~~v~~~~~~n~tG~~ 224 (368)
+..+++-+...++.+-.
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~ 119 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPL 119 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCT
T ss_pred HHcCCCCEEEECCCCCCCCCh
Confidence 34555555544444433
No 249
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=38.22 E-value=49 Score=27.61 Aligned_cols=34 Identities=6% Similarity=-0.030 Sum_probs=26.8
Q ss_pred CceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 208 KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 208 ~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+..|+++- -|..|.....+++.++|++||+.++
T Consensus 178 ~Pa~VicEi-~~ddG~mar~~~l~~fA~~h~l~~i 211 (227)
T 1snn_A 178 VPITTICEM-MGDDGNAMSKNETKRYAEKHNLIYL 211 (227)
T ss_dssp CSEEEEEEE-BCTTSSBCCHHHHHHHHHHHTCCEE
T ss_pred CceEEEEEE-eCCCCCcCCHHHHHHHHHHcCCcEE
Confidence 445554444 4778999999999999999998776
No 250
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=37.79 E-value=57 Score=28.05 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=45.5
Q ss_pred CCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-E
Q 017640 165 AEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-V 243 (368)
Q Consensus 165 ~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~ 243 (368)
+-+......+...++..|.++.......+..-..+.++..+..+...|++...... .+.+..+.+++.|++++ +
T Consensus 15 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~~iPvV~~ 89 (313)
T 3m9w_A 15 ERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ-----VLSNVVKEAKQEGIKVLAY 89 (313)
T ss_dssp STTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTT-----SCHHHHHHHHTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHHHHHHHHHCCCeEEEE
Confidence 34445666777888888998887765432111124455556667777776654221 23456666778888665 4
Q ss_pred ec
Q 017640 244 DA 245 (368)
Q Consensus 244 D~ 245 (368)
|.
T Consensus 90 ~~ 91 (313)
T 3m9w_A 90 DR 91 (313)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 251
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=37.67 E-value=95 Score=24.73 Aligned_cols=39 Identities=13% Similarity=0.174 Sum_probs=26.7
Q ss_pred HHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.+...+.++.-+|+++. +|....+-++++.|+++|+.+|
T Consensus 106 ~~~~~~~~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI 144 (199)
T 1x92_A 106 QIRALGQPGDVLLAIST----SGNSANVIQAIQAAHDREMLVV 144 (199)
T ss_dssp HHHHHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHhCCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEE
Confidence 33445666666666766 4666667788899999997654
No 252
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=36.96 E-value=58 Score=29.13 Aligned_cols=17 Identities=29% Similarity=0.331 Sum_probs=12.2
Q ss_pred HHHHcCCEEEEEeCCCC
Q 017640 177 VAQKTGANLKFLNLNDD 193 (368)
Q Consensus 177 ~~~~~g~~v~~v~~~~~ 193 (368)
..+..|++++.+++.++
T Consensus 62 ~lk~~G~N~VRip~~~~ 78 (345)
T 3jug_A 62 AIAEQGANTIRIVLSDG 78 (345)
T ss_dssp HHHHTTCSEEEEEECCS
T ss_pred HHHHcCCCEEEEEecCC
Confidence 34567999988887643
No 253
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=36.56 E-value=85 Score=28.14 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCCCCCCcE-EEeCC--------HHHHHHHHHHHccCCCCCCCCEEEEcCCCCccc
Q 017640 114 ELARKKVAAFINASDSGEI-VFTKN--------ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSA 170 (368)
Q Consensus 114 ~~~r~~la~~~~~~~~~~v-~~t~g--------~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~ 170 (368)
+.+++.|.+.+|.+.. +| +++.. ..+.|..++..+.. ..++||.+++.--.|...
T Consensus 78 ~~m~~~L~~~~Gf~~~-~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~-~a~pgD~llfYFSGHG~q 141 (350)
T 4f6o_A 78 HNIFNFLTNGYGYSSD-DIVILTDDQNDLVRVPTRANMIRAMQWLVK-DAQPNDSLFLHYSGHGGQ 141 (350)
T ss_dssp HHHHHHHHHHSCCCGG-GEEEEETTSSCGGGSCCHHHHHHHHHHHHT-TCCTTCEEEEEEESCEEE
T ss_pred HHHHHHHHHhcCCCcc-ceeeecccccccccCCCHHHHHHHHHHHHH-hCCCCCEEEEEEcCCcee
Confidence 3577777777888754 55 55542 34566666666532 467899988877777763
No 254
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=36.17 E-value=1e+02 Score=24.38 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=25.9
Q ss_pred HHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 202 KEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 202 ~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
...+.++.-+|+++. +|....+-+.++.++++|+.+|
T Consensus 104 ~~~~~~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI 140 (196)
T 2yva_A 104 RALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIV 140 (196)
T ss_dssp HHHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEE
T ss_pred HhcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEE
Confidence 344566666666666 4666667788899999997654
No 255
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=35.28 E-value=1.1e+02 Score=22.53 Aligned_cols=18 Identities=11% Similarity=0.279 Sum_probs=15.6
Q ss_pred cCHHHHHHHHHhcCCEEE
Q 017640 225 LPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 225 ~~l~~i~~l~~~~g~~li 242 (368)
.++.+|.++++++|+.++
T Consensus 61 ~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 61 VNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHcCCEEE
Confidence 579999999999998775
No 256
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=34.50 E-value=45 Score=24.78 Aligned_cols=38 Identities=21% Similarity=0.262 Sum_probs=26.0
Q ss_pred HHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 199 DKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 199 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
+.+++..+..++.|+++. |.. -+++.++|+++|+.++-
T Consensus 73 ~~v~e~~~~g~k~v~~~~-----G~~--~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNP-----GTE--NEELEEILSENGIEPVI 110 (122)
T ss_dssp GGHHHHHHHCCSEEEECT-----TCC--CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHhcCCCEEEECC-----CCC--hHHHHHHHHHcCCeEEC
Confidence 335555555677776654 322 37999999999999883
No 257
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=33.73 E-value=25 Score=29.07 Aligned_cols=73 Identities=7% Similarity=0.001 Sum_probs=38.8
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCC--HHHHHHhcccCceEEEEcccc---ccccc----ccCHHHHHHHHHhcCCE
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPD--LDKLKEMLSRKTKLVVIHHIS---NMLAS----ILPIEEIVHWSHDVGAK 240 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d--~~~l~~~l~~~~~~v~~~~~~---n~tG~----~~~l~~i~~l~~~~g~~ 240 (368)
.......+++. .+++..-|.......| ...++.+.+.+ .++=++... .+.|. ..+..++.++|+++|+.
T Consensus 85 ~~~~n~~a~~~-~vDII~Hp~~~~~~~~~~~~~a~~A~e~g-v~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ 162 (212)
T 1v77_A 85 DLRVIRYSIEK-GVDAIISPWVNRKDPGIDHVLAKLMVKKN-VALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVR 162 (212)
T ss_dssp CHHHHHHHHHT-TCSEEECTTTTSSSCSCCHHHHHHHHHHT-CEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHhC-CCCEEecccccccCCCCCHHHHHHHHHCC-eEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCC
Confidence 33445556666 7777766654432333 33333333333 333333321 12222 45567899999999987
Q ss_pred EEEe
Q 017640 241 VLVD 244 (368)
Q Consensus 241 li~D 244 (368)
+++.
T Consensus 163 ivis 166 (212)
T 1v77_A 163 RFLT 166 (212)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7754
No 258
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=33.12 E-value=1.7e+02 Score=24.55 Aligned_cols=47 Identities=11% Similarity=-0.102 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
....+...++..|.++.......+..-..+.++..+..+...|++..
T Consensus 26 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~ 72 (287)
T 3bbl_A 26 FLSSMVREAGAVNYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSS 72 (287)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECS
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEee
Confidence 33445555566666665544332222223444544455555555543
No 259
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=32.46 E-value=24 Score=32.86 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=26.7
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
+....|...+++++++-||++|+.||+|.+.
T Consensus 57 idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 57 LQSRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 4455788888999999999999999999984
No 260
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=32.36 E-value=61 Score=28.05 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=45.0
Q ss_pred cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 168 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
......+...++..|.++.......+..-..+.++..+..++..|++..... ....+..+.+++.|++++ +|.
T Consensus 19 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 19 IDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG-----TTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG-----GGGHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc-----hhHHHHHHHHHHCCCCEEEECC
Confidence 3445567778888899988776433211123445666667788887765432 124556667788898765 554
No 261
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=32.33 E-value=72 Score=25.34 Aligned_cols=62 Identities=15% Similarity=-0.013 Sum_probs=40.4
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccccccccCHHHHHHHH
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNMLASILPIEEIVHWS 234 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~tG~~~~l~~i~~l~ 234 (368)
+...+...++..|.++..+.+-+| |.+.|.+++.. +..+|+++....+|-.-+..+.+++.+
T Consensus 24 N~~~l~~~L~~~G~~v~~~~iv~D---d~~~I~~~l~~a~~~~DlVittGG~g~~~~D~T~ea~a~~~ 88 (172)
T 3kbq_A 24 NAAFIGNFLTYHGYQVRRGFVVMD---DLDEIGWAFRVALEVSDLVVSSGGLGPTFDDMTVEGFAKCI 88 (172)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECS---CHHHHHHHHHHHHHHCSEEEEESCCSSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCC---CHHHHHHHHHHHHhcCCEEEEcCCCcCCcccchHHHHHHHc
Confidence 444566777888999887665554 66777766643 468888888877764444455554443
No 262
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=32.10 E-value=27 Score=24.10 Aligned_cols=20 Identities=15% Similarity=0.091 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCEEEEecC
Q 017640 227 IEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a 246 (368)
-++|.++|++||+.++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 56899999999999999965
No 263
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=32.01 E-value=1.7e+02 Score=25.43 Aligned_cols=55 Identities=20% Similarity=0.295 Sum_probs=35.0
Q ss_pred HcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEccc-ccccccccCHHHHHHHHHhcC-CEEEE
Q 017640 180 KTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHI-SNMLASILPIEEIVHWSHDVG-AKVLV 243 (368)
Q Consensus 180 ~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~-~n~tG~~~~l~~i~~l~~~~g-~~li~ 243 (368)
..+++++..++. |.+.++++++. +..+|+.+.. .|. .....|.+.|++.| +..++
T Consensus 59 ~~~v~~~~~Dl~-----d~~~l~~~~~~~~~d~Vi~~a~~~n~----~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 59 DKGAIIVYGLIN-----EQEAMEKILKEHEIDIVVSTVGGESI----LDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp HTTCEEEECCTT-----CHHHHHHHHHHTTCCEEEECCCGGGG----GGHHHHHHHHHHHCCCSEEE
T ss_pred hCCcEEEEeecC-----CHHHHHHHHhhCCCCEEEECCchhhH----HHHHHHHHHHHHcCCceEEe
Confidence 346777666555 78889888863 4455544443 333 33568889999988 65444
No 264
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=31.76 E-value=1.3e+02 Score=23.20 Aligned_cols=71 Identities=8% Similarity=0.126 Sum_probs=38.8
Q ss_pred HHHHHHHHcCCEEEEEeCCC--CCC-----CCHHHHHHhcccC---ceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 173 PWQLVAQKTGANLKFLNLND--DES-----PDLDKLKEMLSRK---TKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 173 ~~~~~~~~~g~~v~~v~~~~--~~~-----~d~~~l~~~l~~~---~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
....+|...|.++..+-.+. .|. ..+..+.+.+... ...|++...+-.+=....+..+.+.++++|+.|+
T Consensus 30 ~l~~~a~~~g~~i~~~~~D~g~Sg~~~~~Rp~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~~~~~~~~~~~l~~~gv~l~ 109 (167)
T 3guv_A 30 RMKAFAIYNDYEIVGEYEDAGKSGKSIEGRIQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYGVNLI 109 (167)
T ss_dssp HHHHHHHHTTCEEEEEEEECCCSSSSSCCCHHHHHHHHHHHTCTTCCSEEEESCGGGTCSSHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhCCCEEEEEEeecCCCCCCcccCHHHHHHHHHHHcCCCCccEEEEEeCchhcCCHHHHHHHHHHHHHCCCEEE
Confidence 34455666677764333221 222 2233444444443 4677777776554444446667777888888766
Q ss_pred E
Q 017640 243 V 243 (368)
Q Consensus 243 ~ 243 (368)
+
T Consensus 110 ~ 110 (167)
T 3guv_A 110 C 110 (167)
T ss_dssp E
T ss_pred E
Confidence 4
No 265
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=31.57 E-value=63 Score=25.41 Aligned_cols=51 Identities=8% Similarity=0.152 Sum_probs=33.8
Q ss_pred cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-----CceEEEEccccccc
Q 017640 168 HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-----KTKLVVIHHISNML 221 (368)
Q Consensus 168 ~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~~~n~t 221 (368)
.++...+....+..|.++....+-+| |.+.+++++.. +..+|+++....++
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~D---d~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKD---DKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECS---SHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCC---CHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 34444566677778998877665444 56666665532 56788888886665
No 266
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=30.80 E-value=1.5e+02 Score=27.43 Aligned_cols=97 Identities=10% Similarity=0.115 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcC-CEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTG-ANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIH 215 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g-~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~ 215 (368)
..+++......+ ++=..+.+.+|-....+..|..+.+..+ +.++ -++...-++..+++.++.+. .++.+
T Consensus 281 ~~elid~y~~ll-----e~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~Iv---GDEl~vTn~~~i~~~Ie~~a~n~IlI- 351 (441)
T 3qtp_A 281 VDGLIAEYVDYG-----KHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIV---GDDLLVTNPARVQMAMDKNACNSVLI- 351 (441)
T ss_dssp HHHHHHHHHHHH-----HHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEE---ESTTTTTCHHHHHHHHHHTCCSEEEE-
T ss_pred HHHHHHHHHHHh-----hhcceeeecCCCChHHHHHHHHHHHhcCCceEE---eccccccCHHHHHHHHHcCCCCEEEe-
Confidence 355665555433 3334778888888888889999988876 3332 12223336888888887654 33333
Q ss_pred ccccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 216 HISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 216 ~~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
-+ |-.|.+....+++++|+++|+.+++=
T Consensus 352 Kv-nqiGGITEalkaa~lA~~~G~~vmvs 379 (441)
T 3qtp_A 352 KV-NQIGTLTETFKTIKMAQEKGWGVMAS 379 (441)
T ss_dssp CG-GGTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cc-cccccHHHHHHHHHHHHHcCCeEEEe
Confidence 22 34577777888999999999987753
No 267
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=30.47 E-value=1.5e+02 Score=26.06 Aligned_cols=74 Identities=15% Similarity=0.137 Sum_probs=48.0
Q ss_pred CCCCCCEEEEcCCCCcc------cHHHHHHHHHHcCCEEEEEeCCCC--CCC------CHHHHHHhcc-cCceEEEEccc
Q 017640 153 NLKSGDEVILTVAEHHS------AIVPWQLVAQKTGANLKFLNLNDD--ESP------DLDKLKEMLS-RKTKLVVIHHI 217 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s------~~~~~~~~~~~~g~~v~~v~~~~~--~~~------d~~~l~~~l~-~~~~~v~~~~~ 217 (368)
++++||+|-+.+|+.+. .+.......+..|.+++.-+.-.. +.+ -.++|.+++. +++++|+....
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 58999999999887542 122233344667999987664321 111 2455666654 57788888877
Q ss_pred ccccccccC
Q 017640 218 SNMLASILP 226 (368)
Q Consensus 218 ~n~tG~~~~ 226 (368)
..-+-.++|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 777777777
No 268
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=30.29 E-value=50 Score=27.80 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=29.4
Q ss_pred HHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEE
Q 017640 171 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKV 241 (368)
Q Consensus 171 ~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~l 241 (368)
...+...++..|.++.......+..-..+.++..+..+...|++..... .+..+.+++.|+++
T Consensus 26 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--------~~~~~~l~~~~iPv 88 (276)
T 3jy6_A 26 FKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN--------PQTVQEILHQQMPV 88 (276)
T ss_dssp HHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC--------HHHHHHHHTTSSCE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc--------HHHHHHHHHCCCCE
Confidence 3445555566676666655432211011233444444555555544321 34444555566543
No 269
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=30.08 E-value=1.1e+02 Score=25.23 Aligned_cols=94 Identities=14% Similarity=0.158 Sum_probs=42.4
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
|+++..+.+.. ..|..|++..|.-.. ...-..++...|.++..++.. +.+++.+.+..+..+|++.-.+
T Consensus 43 T~lL~~a~r~~-----~~g~kVli~k~~~d~-R~ge~~i~s~~g~~~~a~~~~-----~~~~~~~~~~~~~dvViIDEaQ 111 (214)
T 2j9r_A 43 EELIRRVRRTQ-----FAKQHAIVFKPCIDN-RYSEEDVVSHNGLKVKAVPVS-----ASKDIFKHITEEMDVIAIDEVQ 111 (214)
T ss_dssp HHHHHHHHHHH-----HTTCCEEEEECC------------------CCEEECS-----SGGGGGGGCCSSCCEEEECCGG
T ss_pred HHHHHHHHHHH-----HCCCEEEEEEeccCC-cchHHHHHhhcCCeeEEeecC-----CHHHHHHHHhcCCCEEEEECcc
Confidence 56677766654 456666666553221 111223344446555555543 2234444444446788888777
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
..+-.. ++.+..++. .|+.||+=+-
T Consensus 112 F~~~~~--V~~l~~l~~-~~~~Vi~~Gl 136 (214)
T 2j9r_A 112 FFDGDI--VEVVQVLAN-RGYRVIVAGL 136 (214)
T ss_dssp GSCTTH--HHHHHHHHH-TTCEEEEEEC
T ss_pred cCCHHH--HHHHHHHhh-CCCEEEEEec
Confidence 643111 344444443 4887776544
No 270
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=29.99 E-value=65 Score=26.78 Aligned_cols=94 Identities=13% Similarity=0.150 Sum_probs=49.9
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHIS 218 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~ 218 (368)
|+++..+.+.. ..|..+++..|.-.. ...-...+.+.|.+...+++. +..++.+.+..+..+|.+.-.+
T Consensus 43 T~Llr~~~r~~-----~~g~kvli~kp~~D~-R~~~~~I~Sr~G~~~~a~~v~-----~~~di~~~i~~~~dvV~IDEaQ 111 (219)
T 3e2i_A 43 EELIRRLRRGI-----YAKQKVVVFKPAIDD-RYHKEKVVSHNGNAIEAINIS-----KASEIMTHDLTNVDVIGIDEVQ 111 (219)
T ss_dssp HHHHHHHHHHH-----HTTCCEEEEEEC------------CBTTBCCEEEEES-----SGGGGGGSCCTTCSEEEECCGG
T ss_pred HHHHHHHHHHH-----HcCCceEEEEeccCC-cchhhhHHHhcCCceeeEEeC-----CHHHHHHHHhcCCCEEEEechh
Confidence 44556655443 345556666553321 112233445556666666654 3445555555667888888887
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
..+-.. ++.+.+++ ..|+.|++=+-
T Consensus 112 Ff~~~~--v~~l~~la-~~gi~Vi~~GL 136 (219)
T 3e2i_A 112 FFDDEI--VSIVEKLS-ADGHRVIVAGL 136 (219)
T ss_dssp GSCTHH--HHHHHHHH-HTTCEEEEEEE
T ss_pred cCCHHH--HHHHHHHH-HCCCEEEEeec
Confidence 765211 45566666 57888887554
No 271
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=29.75 E-value=30 Score=32.48 Aligned_cols=31 Identities=10% Similarity=0.129 Sum_probs=26.1
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
+....|...+++++++-||++|+.||+|.+.
T Consensus 71 id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3344677778999999999999999999984
No 272
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=29.17 E-value=32 Score=31.88 Aligned_cols=30 Identities=20% Similarity=0.303 Sum_probs=25.4
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
....|...+++++++-||++|+.||+|.+.
T Consensus 80 d~~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 80 ETRFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 334677777999999999999999999984
No 273
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=28.90 E-value=32 Score=32.36 Aligned_cols=30 Identities=13% Similarity=0.107 Sum_probs=25.7
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
....|...+++++++-||++|+.||+|.+.
T Consensus 76 dp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 76 RTKYGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 344677777999999999999999999984
No 274
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=28.89 E-value=2.3e+02 Score=26.17 Aligned_cols=48 Identities=8% Similarity=0.144 Sum_probs=29.1
Q ss_pred CCHHHHHHhccc-----Cce--EEEEcccccccccc--cC--------HHHHHHHHHhcCCEEEE
Q 017640 196 PDLDKLKEMLSR-----KTK--LVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 196 ~d~~~l~~~l~~-----~~~--~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~g~~li~ 243 (368)
++++++.+.+.. +++ +|++.+.+...+.. .. ...|..+|+++|+.+++
T Consensus 291 ~s~~~i~~~ir~l~~~~~~~~~lIVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ 355 (444)
T 3bgw_A 291 QSVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 355 (444)
T ss_dssp CBHHHHHHHHHHHHHHSCSSCEEEEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCeEEEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 466666655432 567 88888877554322 11 24666778888877664
No 275
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=28.84 E-value=1.9e+02 Score=24.84 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=42.7
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CCCCCCCHHHHHHhc---c-cCceEEEEcccccccccccCHHHH
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-NDDESPDLDKLKEML---S-RKTKLVVIHHISNMLASILPIEEI 230 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~~~~d~~~l~~~l---~-~~~~~v~~~~~~n~tG~~~~l~~i 230 (368)
++..+++..+. |.-+++.+|.++..+.- .++..+.+..|.+.+ + .+.++|++....++ +-+
T Consensus 178 ~~~~~v~~H~a-------f~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTA-------FSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESC-------CHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCc-------hHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 46677776653 33346778999877653 334455566555544 3 36677777765443 233
Q ss_pred HHHHHhcCCEEE
Q 017640 231 VHWSHDVGAKVL 242 (368)
Q Consensus 231 ~~l~~~~g~~li 242 (368)
..++++.|+.++
T Consensus 244 ~~la~~~g~~v~ 255 (286)
T 3gi1_A 244 HAIAKSTGAKVK 255 (286)
T ss_dssp HHHHHTTTCEEE
T ss_pred HHHHHHhCCeEE
Confidence 356778888765
No 276
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=28.40 E-value=2e+02 Score=25.97 Aligned_cols=74 Identities=15% Similarity=0.114 Sum_probs=48.5
Q ss_pred CCCCCCEEEEcCCCCccc------HHHHHHHHHHcCCEEEEEeCCCC--CCC------CHHHHHHhcc-cCceEEEEccc
Q 017640 153 NLKSGDEVILTVAEHHSA------IVPWQLVAQKTGANLKFLNLNDD--ESP------DLDKLKEMLS-RKTKLVVIHHI 217 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~------~~~~~~~~~~~g~~v~~v~~~~~--~~~------d~~~l~~~l~-~~~~~v~~~~~ 217 (368)
.+++||+|-+.+|+.+.. +.......+..|.+|+.-+.... +.+ -.++|.+++. +.+++|+..-.
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 488999999999976531 22233344667999987765421 111 2455666665 46788888887
Q ss_pred ccccccccC
Q 017640 218 SNMLASILP 226 (368)
Q Consensus 218 ~n~tG~~~~ 226 (368)
..-+-.++|
T Consensus 119 Gyga~rlLp 127 (371)
T 3tla_A 119 GDNSNSLLP 127 (371)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 777777777
No 277
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=28.34 E-value=33 Score=32.19 Aligned_cols=30 Identities=10% Similarity=0.043 Sum_probs=25.5
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
...|...+++++++-||++|+.||+|.+.-
T Consensus 75 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 75 TKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp CSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 346777779999999999999999999843
No 278
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=28.31 E-value=33 Score=32.61 Aligned_cols=30 Identities=13% Similarity=0.174 Sum_probs=25.6
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
....|...+++++++-||++|+.||+|.+.
T Consensus 75 dp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 75 RTKYGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334677777999999999999999999984
No 279
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=28.12 E-value=59 Score=27.50 Aligned_cols=72 Identities=13% Similarity=0.211 Sum_probs=42.1
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-EecC
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDAC 246 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~a 246 (368)
....+...++..|.++..+....+..-..+.++..+..+...|++..... ....++.+.+++.|+.++ +|..
T Consensus 26 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-----~~~~~~~~~~~~~~iPvV~~~~~ 98 (293)
T 3l6u_A 26 LINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD-----VYIGSAIEEAKKAGIPVFAIDRM 98 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT-----TTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-----HHHHHHHHHHHHcCCCEEEecCC
Confidence 44556777788899988877543221122445555666777777654321 123455566677787554 5543
No 280
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=27.56 E-value=1.8e+02 Score=26.94 Aligned_cols=96 Identities=13% Similarity=0.163 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHH 216 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~ 216 (368)
..+++......+ .+=+.+++.+|-.......|..+.+...+.+ -.++...-++..+++.+..+. .+|.+ -
T Consensus 275 ~~eai~~~~~~l-----~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI---~gDE~~vt~~~~~~~~i~~~a~d~i~i-k 345 (436)
T 2al1_A 275 GPQLADLYHSLM-----KRYPIVSIEDPFAEDDWEAWSHFFKTAGIQI---VADDLTVTNPKRIATAIEKKAADALLL-K 345 (436)
T ss_dssp HHHHHHHHHHHH-----HHSCEEEEECCSCTTCHHHHHHHHTTCCSEE---EESTTTTTCHHHHHHHHHTTCCSEEEE-C
T ss_pred HHHHHHHHHHHH-----HhCCcEEEECCCCCcCHHHHHHHHhcCCCeE---EECCcccCCHHHHHHHHHhCCCCEEEe-c
Confidence 345555544433 3334788889988888888888876544333 223333237889998887654 33333 2
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEE
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
+ |-.|.+....+++++|+++|+.+++
T Consensus 346 v-~qiGGitea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 346 V-NQIGTLSESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp H-HHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred h-hhcCCHHHHHHHHHHHHHcCCeEEE
Confidence 2 3357777788899999999997765
No 281
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=27.47 E-value=54 Score=27.68 Aligned_cols=48 Identities=15% Similarity=0.147 Sum_probs=29.4
Q ss_pred HHHHHHhcccCceEEEEcccccc---------cccccC-HHHHHHHHHhcCCEEEEec
Q 017640 198 LDKLKEMLSRKTKLVVIHHISNM---------LASILP-IEEIVHWSHDVGAKVLVDA 245 (368)
Q Consensus 198 ~~~l~~~l~~~~~~v~~~~~~n~---------tG~~~~-l~~i~~l~~~~g~~li~D~ 245 (368)
++.+++++.....+|.+=..+.+ ....+. .+++.++|+++|+.+|+++
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd 103 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVND 103 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeC
Confidence 34556666666666666555421 112222 4678889999999888854
No 282
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=27.42 E-value=2.6e+02 Score=25.46 Aligned_cols=85 Identities=13% Similarity=0.137 Sum_probs=56.3
Q ss_pred CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHH
Q 017640 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWS 234 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~ 234 (368)
.+-+..++.+|..+.....+..+.+..+..+ -.++.. .+..++.+.+..+..-++..-... |-+....+|+++|
T Consensus 256 ~~~~l~~iEqP~~~~d~~~~~~l~~~~~iPI---a~dE~~-~~~~~~~~~i~~~a~div~~d~~~--GGit~~~kia~~A 329 (412)
T 4h1z_A 256 EPHGLWFAEAPVRTEDIDGLARVAASVSTAI---AVGEEW-RTVHDMVPRVARRALAIVQPEMGH--KGITQFMRIGAYA 329 (412)
T ss_dssp GGGCEEEEECCSCTTCHHHHHHHHHHCSSEE---EECTTC-CSHHHHHHHHHTTCCSEECCCHHH--HHHHHHHHHHHHH
T ss_pred cccccceecCCCCccchHHHHHHHhhcCCcc---ccCCcc-cchHhHHHHHHcCCCCEEEecCCC--CChHHHHHHHHHH
Confidence 4445778899988877888888877665433 334443 367888887766533233222322 5566788999999
Q ss_pred HhcCCEEEEec
Q 017640 235 HDVGAKVLVDA 245 (368)
Q Consensus 235 ~~~g~~li~D~ 245 (368)
+++|+.+..=.
T Consensus 330 ~~~gi~v~~h~ 340 (412)
T 4h1z_A 330 HVHHIKVIPHA 340 (412)
T ss_dssp HHTTCEECCCC
T ss_pred HHCCCcEEecC
Confidence 99999886543
No 283
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=27.21 E-value=99 Score=26.00 Aligned_cols=75 Identities=15% Similarity=0.154 Sum_probs=40.5
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
.....+...++..|.++..+....+..-..+.++..+..+...|++....... ..+..++.+.+++.|+.++ +|.
T Consensus 32 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~~~~~~~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 32 SIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSAL--QTPNIGYYLNLEKNGIPFAMINA 107 (298)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTS--CCTTHHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccc--cCCcHHHHHHHHhcCCCEEEEec
Confidence 44556667777788888777654321111233455555677777765543211 1123344555666776544 554
No 284
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=27.14 E-value=2.3e+02 Score=24.91 Aligned_cols=68 Identities=9% Similarity=0.110 Sum_probs=35.6
Q ss_pred HHHHHHcCCCCCCcEEEeCCHHH----------HH----HHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCC
Q 017640 118 KKVAAFINASDSGEIVFTKNATE----------AI----NLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGA 183 (368)
Q Consensus 118 ~~la~~~~~~~~~~v~~t~g~t~----------a~----~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~ 183 (368)
+.+.++.+-++. -|+||+|+|. ++ ......+ .+.++|.++...|-++..-......+-..|.
T Consensus 29 ~~~~~w~~d~~a-~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~ 104 (358)
T 4gs5_A 29 DFMEKWLGGARE-FVLHTSGSTGMPKPITVTRAQLAASAAMTGKAL---SLGPGTRALVCLNVGYIAGLMMLVRGMELDW 104 (358)
T ss_dssp HHHHHHHHTCSE-EEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHT---TCCTTCEEEECSCTTSHHHHHHHHHHHHHTC
T ss_pred hHhhccCCCCCE-EEEECCcccccCcEEEEeHHHHHHHHHHHHHHh---CCCCCCEEEEECChHHHHHHHHHHHHHHhCc
Confidence 334445554443 6778887662 12 2222334 4788999888877665322111112223477
Q ss_pred EEEEEe
Q 017640 184 NLKFLN 189 (368)
Q Consensus 184 ~v~~v~ 189 (368)
.+...+
T Consensus 105 ~~~~~~ 110 (358)
T 4gs5_A 105 ELTVTE 110 (358)
T ss_dssp EEEEEC
T ss_pred EEEecC
Confidence 766554
No 285
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=27.10 E-value=3.2e+02 Score=26.49 Aligned_cols=74 Identities=19% Similarity=0.267 Sum_probs=36.4
Q ss_pred CCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHH
Q 017640 153 NLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIV 231 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~ 231 (368)
.+++||.|.+.-+..+-....+.. +-+.|+..+. +++.. ..+.+...+.. ++++|+........|...++.++.
T Consensus 135 Gv~~Gd~V~i~~~~~~e~v~a~lA-~~~~Gav~vp--l~~~~--~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~ 209 (663)
T 1ry2_A 135 GVRKGDTVAVYMPMVPEAIITLLA-ISRIGAIHSV--VFAGF--SSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIV 209 (663)
T ss_dssp CCCTTCEEEECCCSSHHHHHHHHH-HHHTTCEEEE--CCTTS--CHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHH
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHH-HHHcCCEEEe--eCCCC--CHHHHHHHHHhcCCeEEEEccccccCCcccchHHHH
Confidence 356666666666555444333322 2334544333 33322 34555555543 556666655555555555654443
No 286
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=26.96 E-value=34 Score=31.72 Aligned_cols=28 Identities=18% Similarity=0.425 Sum_probs=24.2
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
..|...+++++++-||++|+.|++|.+.
T Consensus 79 ~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~ 106 (449)
T 3dhu_A 79 EYGTLADFKALTDRAHELGMKVMLDIVY 106 (449)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 4566677999999999999999999984
No 287
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=26.93 E-value=34 Score=31.67 Aligned_cols=29 Identities=28% Similarity=0.284 Sum_probs=25.1
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
...|...+++++++-||++|+.||+|.+.
T Consensus 64 p~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 64 AEYGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 34677778999999999999999999994
No 288
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=26.72 E-value=97 Score=25.92 Aligned_cols=22 Identities=27% Similarity=0.324 Sum_probs=20.4
Q ss_pred cccccCHHHHHHHHHhcCCEEE
Q 017640 221 LASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li 242 (368)
.|......++.+++++||+.++
T Consensus 190 dG~mar~~~l~~fA~~h~L~ii 211 (233)
T 1k4i_A 190 APGMLRGDECVAFARRWGLKVC 211 (233)
T ss_dssp SCEECCHHHHHHHHHHTTCEEE
T ss_pred CCCcCCHHHHHHHHHHcCCcEE
Confidence 7999999999999999998876
No 289
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=26.55 E-value=74 Score=27.46 Aligned_cols=64 Identities=13% Similarity=0.115 Sum_probs=39.5
Q ss_pred HHHHHHcCCEEEEEe-CCCCCCCCHHHHHHhcc----cCceEEEEcccccccccccCHHHHHHHHHhcCCEEE
Q 017640 175 QLVAQKTGANLKFLN-LNDDESPDLDKLKEMLS----RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL 242 (368)
Q Consensus 175 ~~~~~~~g~~v~~v~-~~~~~~~d~~~l~~~l~----~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li 242 (368)
.-+++.+|.+.+.+. +.++..+.+..|.+.++ .+.++|++....++ -..+.|.++|++.|+.++
T Consensus 174 ~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~~a~~~g~~v~ 242 (282)
T 3mfq_A 174 NYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQEAVKAKGGQVE 242 (282)
T ss_dssp HHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHHHHHTTSCCCE
T ss_pred HHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHHHHHhcCCceE
Confidence 344677899977543 23444556666665543 36778876654332 126778888999887554
No 290
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=26.41 E-value=3.3e+02 Score=25.37 Aligned_cols=48 Identities=17% Similarity=0.361 Sum_probs=30.4
Q ss_pred CCHHHHHHhcc-----cCceEEEEccccccccccc--C--------HHHHHHHHHhcCCEEEE
Q 017640 196 PDLDKLKEMLS-----RKTKLVVIHHISNMLASIL--P--------IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 196 ~d~~~l~~~l~-----~~~~~v~~~~~~n~tG~~~--~--------l~~i~~l~~~~g~~li~ 243 (368)
.+++.+.+.+. .++++|++.+.+......- . +..|..+|+++|+.+++
T Consensus 337 ~~~~~i~~~i~~~~~~~~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~ 399 (503)
T 1q57_A 337 AETDRLLAKLAYMRSGLGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVV 399 (503)
T ss_dssp -CHHHHHHHHHHHHHTTCCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEE
Confidence 46777765553 2578999988876543210 1 34667788899987664
No 291
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=26.27 E-value=2.1e+02 Score=26.45 Aligned_cols=95 Identities=12% Similarity=0.168 Sum_probs=62.6
Q ss_pred HHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEccc
Q 017640 139 TEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHI 217 (368)
Q Consensus 139 t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~ 217 (368)
.+++..+...+ .+=+.+++.+|-.......|..+.+...+.+. .++...-++..+++.++.+. .+|.+ -+
T Consensus 273 ~e~~~~~~~ll-----~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~---gDE~~vt~~~~~~~~i~~~a~d~i~i-Kv 343 (439)
T 2akz_A 273 DQLGALYQDFV-----RDYPVVSIEDPFDQDDWAAWSKFTANVGIQIV---GDDLTVTNPKRIERAVEEKACNCLLL-KV 343 (439)
T ss_dssp HHHHHHHHHHH-----HHSCEEEEECCSCTTCHHHHHHHHHTCSSEEE---ESTTTTTCHHHHHHHHHTTCCSEEEE-CH
T ss_pred HHHHHHHHHHH-----HhCCCcEEECCCCcccHHHHHHHHhCCCCEEE---eCCCccCCHHHHHHHHHhCCCCEEEe-ch
Confidence 44555554433 22347889999888888888888776444332 23333337899998887754 33333 22
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEE
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
|-.|.+....+++++|+++|+.+++
T Consensus 344 -~qiGGitea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 344 -NQIGSVTEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp -HHHCCHHHHHHHHHHHHHTTCEEEE
T ss_pred -hhcCCHHHHHHHHHHHHHCCCeEEe
Confidence 3457777788899999999998765
No 292
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=26.21 E-value=37 Score=31.06 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=25.0
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
..|...+++++++-||++|+.||+|.+..
T Consensus 64 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 64 KYGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 35777779999999999999999999843
No 293
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=25.87 E-value=55 Score=31.35 Aligned_cols=47 Identities=13% Similarity=0.164 Sum_probs=31.1
Q ss_pred HHHHHhcccCceEEEEcccccccccccC-HHHHHHHHHhcCCEEEEec
Q 017640 199 DKLKEMLSRKTKLVVIHHISNMLASILP-IEEIVHWSHDVGAKVLVDA 245 (368)
Q Consensus 199 ~~l~~~l~~~~~~v~~~~~~n~tG~~~~-l~~i~~l~~~~g~~li~D~ 245 (368)
+.+++++.....+|-+-..+..+..... .+++.++|++||+.+|+++
T Consensus 29 ~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 29 GQVEAGLQNGVTLVQIREKDADTKFFIEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCTTHHHHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHCCCCEEEEecCCCCHHHHHHHHHHHHHHHHhcCCEEEEeC
Confidence 5556666656666666555444444444 5688889999998888865
No 294
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=25.77 E-value=2e+02 Score=25.03 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=44.3
Q ss_pred CCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC-CCCCCCCHHHHHHhc---cc-CceEEEEcccccccccccCHHHH
Q 017640 156 SGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL-NDDESPDLDKLKEML---SR-KTKLVVIHHISNMLASILPIEEI 230 (368)
Q Consensus 156 ~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~-~~~~~~d~~~l~~~l---~~-~~~~v~~~~~~n~tG~~~~l~~i 230 (368)
++..+++..+. |.-+++.+|.+...+.- .++..+.+..|.+.+ ++ ++++|+++...++ +-+
T Consensus 189 ~~~~~v~~H~a-------f~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTA-------FGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASS-------KVA 254 (312)
T ss_dssp SCCEEEESSCT-------THHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCH-------HHH
T ss_pred CCCEEEEECCc-------hHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 46677776652 34456788999876642 234455666665544 33 5677776655432 344
Q ss_pred HHHHHhcCCEEE
Q 017640 231 VHWSHDVGAKVL 242 (368)
Q Consensus 231 ~~l~~~~g~~li 242 (368)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 456788888764
No 295
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=25.67 E-value=41 Score=32.07 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=26.1
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
...|...+++++++-||++|+.||+|.+.-
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~N 116 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVPN 116 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEeec
Confidence 456888889999999999999999999843
No 296
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=25.66 E-value=3e+02 Score=23.21 Aligned_cols=54 Identities=24% Similarity=0.312 Sum_probs=31.9
Q ss_pred cCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccccc-ccccccCHHHHHHHHHhcC-CE
Q 017640 181 TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISN-MLASILPIEEIVHWSHDVG-AK 240 (368)
Q Consensus 181 ~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n-~tG~~~~l~~i~~l~~~~g-~~ 240 (368)
.+++++..++. |.+.++++++. ..+|+.+.... +.....-...+.+.|++.| +.
T Consensus 55 ~~~~~~~~D~~-----d~~~l~~~~~~-~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~ 110 (313)
T 1qyd_A 55 LGAKLIEASLD-----DHQRLVDALKQ-VDVVISALAGGVLSHHILEQLKLVEAIKEAGNIK 110 (313)
T ss_dssp TTCEEECCCSS-----CHHHHHHHHTT-CSEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred CCeEEEeCCCC-----CHHHHHHHHhC-CCEEEECCccccchhhHHHHHHHHHHHHhcCCCc
Confidence 35565544443 78888888864 44444433322 2113334678889999988 63
No 297
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=25.62 E-value=36 Score=24.29 Aligned_cols=20 Identities=10% Similarity=0.217 Sum_probs=17.8
Q ss_pred HHHHHHHHHhcCCEEEEecC
Q 017640 227 IEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a 246 (368)
-++|.++|++||+.++.|..
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 56899999999999999865
No 298
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=25.46 E-value=41 Score=23.76 Aligned_cols=20 Identities=15% Similarity=0.295 Sum_probs=17.8
Q ss_pred HHHHHHHHHhcCCEEEEecC
Q 017640 227 IEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a 246 (368)
-.+|.++|+++|+.++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVK 48 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEECHH
Confidence 56899999999999999865
No 299
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=25.45 E-value=40 Score=31.08 Aligned_cols=31 Identities=13% Similarity=0.222 Sum_probs=25.5
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
++...|...+++++++-||++|+.||+|.+.
T Consensus 74 idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~ 104 (424)
T 2dh2_A 74 IDPNFGSKEDFDSLLQSAKKKSIRVILDLTP 104 (424)
T ss_dssp ECGGGCCHHHHHHHHHHHHHTTCEEEEECCT
T ss_pred cCccCCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 3344677777999999999999999999984
No 300
>2g0t_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.67A {Thermotoga maritima} SCOP: c.37.1.10
Probab=25.23 E-value=2.9e+02 Score=24.62 Aligned_cols=106 Identities=16% Similarity=0.134 Sum_probs=66.9
Q ss_pred cEEEeC---CHH--HHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhc
Q 017640 131 EIVFTK---NAT--EAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEML 205 (368)
Q Consensus 131 ~v~~t~---g~t--~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l 205 (368)
.++++. |+. +.+.-.+... ++.|-.|+..-.++.+....+..+|+..|.++..+..+++.. .+. ...+
T Consensus 92 ~lvig~a~~gg~l~~~~~~~I~~A----l~~G~nVvsglh~~l~~~pel~~~A~~~Gv~i~dvr~~p~~l-~v~--~g~i 164 (350)
T 2g0t_A 92 VLIIGVSNPGGYLEEQIATLVKKA----LSLGMDVISGLHFKISQQTEFLKIAHENGTRIIDIRIPPLEL-DVL--RGGI 164 (350)
T ss_dssp EEEECCCSCCHHHHHHHHHHHHHH----HHTTCEEEECCCC--CCHHHHHHHHHHHTCCEEESSSCCSSC-CCC--CSGG
T ss_pred EEEEEecCCCCCCCHHHHHHHHHH----HHcCCcEEeCChhhhhCCHHHHHHHHHCCCEEEEeCcCCCcc-ccc--ccce
Confidence 677753 532 2333333333 567888888877777777778888999999999887776311 111 1111
Q ss_pred cc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 206 SR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 206 ~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
.+ +.+.+.+.......|..+.-.+|.+.+++.|..+-.
T Consensus 165 ~~i~~~ri~v~GTDt~vGKt~t~~~L~~~l~~~G~~v~~ 203 (350)
T 2g0t_A 165 YRKKIKVVGVFGTDCVVGKRTTAVQLWERALEKGIKAGF 203 (350)
T ss_dssp GGCCSEEEEEEESSSSSSHHHHHHHHHHHHHHTTCCEEE
T ss_pred eeecceEEEEecCCCCccCccHHHHHHHHHHhcCCeEEE
Confidence 11 345566555656789988888998999999875544
No 301
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=25.15 E-value=3.5e+02 Score=23.67 Aligned_cols=72 Identities=14% Similarity=0.033 Sum_probs=39.6
Q ss_pred HHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcC
Q 017640 171 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSV 249 (368)
Q Consensus 171 ~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~ 249 (368)
...+..+.+...++.+.|..- +.+.+++++.. +.+..+.....|+. .+-.++.+.|+++|+.++.=..-+.
T Consensus 158 ~~al~~l~~~Gkir~iGvSn~-----~~~~l~~~~~~~~~~~~~~Q~~~~~~---~~~~~l~~~c~~~gI~v~ayspL~~ 229 (334)
T 3krb_A 158 WRAMEQLVEEGLVKHIGVSNY-----TVPLLADLLNYAKIKPLVNQIEIHPW---HPNDATVKFCLDNGIGVTAYSPMGG 229 (334)
T ss_dssp HHHHHHHHHHTSEEEEEEESC-----CHHHHHHHHHHCSSCCSEEEEECBTT---BCCHHHHHHHHHTTCEEEEESTTCC
T ss_pred HHHHHHHHHcCCccEEEEecC-----CHHHHHHHHHhCCCceEEeeeecCcc---cccHHHHHHHHHcCCEEEEEecCCC
Confidence 344555544433455555533 56777776643 22222222223332 1237899999999999886555444
Q ss_pred C
Q 017640 250 P 250 (368)
Q Consensus 250 ~ 250 (368)
|
T Consensus 230 G 230 (334)
T 3krb_A 230 S 230 (334)
T ss_dssp S
T ss_pred C
Confidence 3
No 302
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.00 E-value=2.5e+02 Score=24.72 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=48.4
Q ss_pred CCCCCCEEEEcCCCCccc---HH---HHHHHHHHcCCEEEEEeCCCC--CCC------CHHHHHHhcc-cCceEEEEccc
Q 017640 153 NLKSGDEVILTVAEHHSA---IV---PWQLVAQKTGANLKFLNLNDD--ESP------DLDKLKEMLS-RKTKLVVIHHI 217 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~---~~---~~~~~~~~~g~~v~~v~~~~~--~~~------d~~~l~~~l~-~~~~~v~~~~~ 217 (368)
.+++||+|-+.+|+.+.. .. ......+..|.+++.-+.-.. +.+ -.++|.+++. +.+++|+....
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 589999999998886643 22 233344667999987664321 111 2455666654 46788888887
Q ss_pred ccccccccC
Q 017640 218 SNMLASILP 226 (368)
Q Consensus 218 ~n~tG~~~~ 226 (368)
..-+-.++|
T Consensus 88 G~g~~rlL~ 96 (331)
T 4e5s_A 88 GYNSNGLLK 96 (331)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 777777777
No 303
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=24.97 E-value=37 Score=31.77 Aligned_cols=31 Identities=13% Similarity=0.217 Sum_probs=25.8
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
+...|...+++++++-||++|+.||+|.+..
T Consensus 91 dp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 91 NENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp CTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 3446777779999999999999999999843
No 304
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=24.80 E-value=1.9e+02 Score=26.64 Aligned_cols=84 Identities=15% Similarity=0.161 Sum_probs=58.1
Q ss_pred CEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcccccccccccCHHHHHHHHHh
Q 017640 158 DEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHWSHD 236 (368)
Q Consensus 158 d~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l~~~ 236 (368)
+..++.+|-.+.....+..+.+..|..+ .|-.++....++..+++.++.+. .+|.+. + +-.|-+....+++++|++
T Consensus 284 ~i~~iEePl~~~d~~~~~~l~~~~~~~i-pIa~dEl~~~~~~~~~~~i~~~a~d~i~ik-~-~~~GGite~~~i~~~A~~ 360 (431)
T 2fym_A 284 PIVSIEDGLDESDWDGFAYQTKVLGDKI-QLVGDDLFVTNTKILKEGIEKGIANSILIK-F-NQIGSLTETLAAIKMAKD 360 (431)
T ss_dssp CEEEEESCSCTTCHHHHHHHHHHHTTTS-EEEESTTTTTCHHHHHHHHHTTCCSEEEEC-G-GGTCSHHHHHHHHHHHHH
T ss_pred CceEEECCCCcccHHHHHHHHHHhCCCC-eEEeCCcccCCHHHHHHHHHhCCCCEEEEC-c-cccCCHHHHHHHHHHHHH
Confidence 4788999988888888888887763222 22233323447888888887653 444443 2 346777778889999999
Q ss_pred cCCEEEEe
Q 017640 237 VGAKVLVD 244 (368)
Q Consensus 237 ~g~~li~D 244 (368)
+|+.+++-
T Consensus 361 ~g~~~~~~ 368 (431)
T 2fym_A 361 AGYTAVIS 368 (431)
T ss_dssp TTCEEEEE
T ss_pred CCCeEEEe
Confidence 99988764
No 305
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=24.79 E-value=1e+02 Score=27.08 Aligned_cols=18 Identities=6% Similarity=0.016 Sum_probs=11.0
Q ss_pred HHHHHHHcCCEEEEEeCC
Q 017640 174 WQLVAQKTGANLKFLNLN 191 (368)
Q Consensus 174 ~~~~~~~~g~~v~~v~~~ 191 (368)
+..+.+..|++.+.+++.
T Consensus 74 ~~~l~~~~G~N~VRi~~~ 91 (327)
T 3pzt_A 74 LKWLRDDWGITVFRAAMY 91 (327)
T ss_dssp HHHHHHHTCCSEEEEEEE
T ss_pred HHHHHHhcCCCEEEEEeE
Confidence 444445567777777654
No 306
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=24.36 E-value=33 Score=32.16 Aligned_cols=31 Identities=19% Similarity=0.328 Sum_probs=26.3
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
+....|...+++++++-||++|+.||+|.+.
T Consensus 67 idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 67 INTRSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp SEETTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 4444677778999999999999999999984
No 307
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.29 E-value=1e+02 Score=26.81 Aligned_cols=71 Identities=11% Similarity=0.171 Sum_probs=36.7
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCE-EEEec
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK-VLVDA 245 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~-li~D~ 245 (368)
.....+...++..|.++.......+..-..+.++..+..+...|++.... .+-+.+.+++++.+++ +++|.
T Consensus 80 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~------~~~~~~~~~~~~~~iPvV~~~~ 151 (338)
T 3dbi_A 80 ELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRF------LSVDEIDDIIDAHSQPIMVLNR 151 (338)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSS------SCHHHHHHHHHHCSSCEEEESS
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCC------CChHHHHHHHHcCCCCEEEEcC
Confidence 34445666667777777766643221111223444444566666654321 1234566677777764 44554
No 308
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=24.09 E-value=42 Score=31.87 Aligned_cols=28 Identities=11% Similarity=0.293 Sum_probs=24.4
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
..|..-+++++++-||++|+.||+|.+.
T Consensus 75 ~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 75 QYGTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3577777999999999999999999984
No 309
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=24.03 E-value=40 Score=24.09 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=17.7
Q ss_pred HHHHHHHHHhcCCEEEEecC
Q 017640 227 IEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a 246 (368)
-.+|.++|+++|+.++.|-.
T Consensus 29 A~~I~e~A~e~gVPi~e~~~ 48 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIK 48 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCCeecCHH
Confidence 56899999999999999865
No 310
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=23.79 E-value=1.3e+02 Score=26.08 Aligned_cols=50 Identities=18% Similarity=0.218 Sum_probs=25.5
Q ss_pred CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcc
Q 017640 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHH 216 (368)
Q Consensus 167 ~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~ 216 (368)
|......+...++..|.++.....+.+..-..+.++..+..+...|++..
T Consensus 77 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~ 126 (339)
T 3h5o_A 77 FLETLTGIETVLDAAGYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITG 126 (339)
T ss_dssp THHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeC
Confidence 33455566666677777776655432211112334444455665555543
No 311
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=23.76 E-value=3.6e+02 Score=23.43 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=52.6
Q ss_pred cEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeC--C--CCCCCCHHHHHHhcc
Q 017640 131 EIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNL--N--DDESPDLDKLKEMLS 206 (368)
Q Consensus 131 ~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~--~--~~~~~d~~~l~~~l~ 206 (368)
+++.|++. ++..+-. + ++++|++.+..|-+ ..+.+..|.++..++. . --..+.++++++.+.
T Consensus 121 D~v~TSsn--a~~~v~~------~-~~~~iif~pD~~Lg-----~~l~~~~~k~~i~~~~~g~C~vh~~~t~e~i~~~~~ 186 (300)
T 1wzu_A 121 DVTVTSAN--AVEVVKK------L-DSDVVIFGPDKNLA-----HYVAKMTGKKIIPVPSKGHCYVHQKFTLDDVERAKK 186 (300)
T ss_dssp SEEECTTT--HHHHHHT------C-SCSEEEEESCHHHH-----HHHHHHHCCEEEEC-----------CCHHHHHHHHH
T ss_pred CEEEchHH--HHHHHHh------C-CCCeEEEECChhHH-----HHHHHHcCCeEEECCCCCcCCCcccCCHHHHHHHHH
Confidence 45665553 5555542 4 67777777664433 2233444888877662 1 113568889988888
Q ss_pred cCceEEEEcccccccccc------cCHHHHHHHHHhcC
Q 017640 207 RKTKLVVIHHISNMLASI------LPIEEIVHWSHDVG 238 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~------~~l~~i~~l~~~~g 238 (368)
..+.+.++.||.-+.-++ -+-..|.+.+++..
T Consensus 187 ~~P~a~v~~HPEc~~~v~~~aD~vgST~~ii~~~~~~~ 224 (300)
T 1wzu_A 187 LHPNAKLMIHPECIPEVQEKADIIASTGGMIKRACEWD 224 (300)
T ss_dssp HCTTCEEEECTTSCHHHHHTCSEECCHHHHHHHGGGCS
T ss_pred HCCCCEEEECCCCCHHHHhhccccCCHHHHHHHHHhCC
Confidence 888888888886653221 11345555555544
No 312
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=23.55 E-value=3.8e+02 Score=24.47 Aligned_cols=99 Identities=16% Similarity=0.144 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHH 216 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~ 216 (368)
..+++...-..+ ++=+.+++.+|-.......|..+.+..|.++- +-.++...-++..+++.++.+. .+|.+ -
T Consensus 263 ~~eai~~~~~ll-----~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ip-I~gDE~~~tn~~~~~~~i~~~a~d~i~i-K 335 (417)
T 3qn3_A 263 SEALIERYVELC-----AKYPICSIEDGLAENDFEGWIKLTEKLGNKIQ-LVGDDLFVTNEDILREGIIKKMANAVLI-K 335 (417)
T ss_dssp HHHHHHHHHHHH-----HHSCEEEEESSSCTTCHHHHHHHHHHHTTTSE-EEESTTTTTCHHHHHHHHHHTCCSEEEE-C
T ss_pred HHHHHHHHHHHH-----hhcceeEEecCCCcccHHHHHHHHHhhCCCCc-eecCCcccCCHHHHHHHHHhCCCCEEEe-c
Confidence 345555543322 23347778888777777788888777652221 1223332223778888776543 33332 2
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
+ |-.|.+....+++++|+++|+.+++=
T Consensus 336 v-~qiGGiTea~kia~lA~~~G~~v~vs 362 (417)
T 3qn3_A 336 P-NQIGTITQTMRTVRLAQRNNYKCVMS 362 (417)
T ss_dssp H-HHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred C-CCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 2 34566777888999999999988764
No 313
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=23.32 E-value=43 Score=31.47 Aligned_cols=27 Identities=22% Similarity=0.368 Sum_probs=24.0
Q ss_pred cccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 221 LASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 221 tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
.|...+++++++-||++|+.||+|.+.
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 577777999999999999999999994
No 314
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=23.24 E-value=1.2e+02 Score=25.57 Aligned_cols=47 Identities=4% Similarity=0.145 Sum_probs=27.7
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEccc
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHI 217 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~ 217 (368)
....+...++..|.++.......+.. ..+.++..+..+...|++...
T Consensus 29 ~~~gi~~~a~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~ 75 (289)
T 3k9c_A 29 LVEQIYAAATRRGYDVMLSAVAPSRA-EKVAVQALMRERCEAAILLGT 75 (289)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECC
Confidence 34455666677787777666544333 345566666666666666543
No 315
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=23.20 E-value=31 Score=34.45 Aligned_cols=27 Identities=15% Similarity=0.341 Sum_probs=22.7
Q ss_pred ccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 222 ASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 222 G~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
|...+++++++-||++|+.||+|.++.
T Consensus 313 ~~~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 313 TRKTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 345678999999999999999999843
No 316
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=23.10 E-value=2.5e+02 Score=24.86 Aligned_cols=74 Identities=14% Similarity=0.088 Sum_probs=48.2
Q ss_pred CCCCCCEEEEcCCCCccc------HHHHHHHHHHcCCEEEEEeCCCC--CCC------CHHHHHHhcc-cCceEEEEccc
Q 017640 153 NLKSGDEVILTVAEHHSA------IVPWQLVAQKTGANLKFLNLNDD--ESP------DLDKLKEMLS-RKTKLVVIHHI 217 (368)
Q Consensus 153 ~~~~gd~vl~~~~~~~s~------~~~~~~~~~~~g~~v~~v~~~~~--~~~------d~~~l~~~l~-~~~~~v~~~~~ 217 (368)
.+++||+|-+.+|+.+.. +.......+..|.+++.-+.... +.+ -.++|.+++. +.+++|+..-.
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 489999999999987531 22233344667999987654321 111 2455666664 57788888887
Q ss_pred ccccccccC
Q 017640 218 SNMLASILP 226 (368)
Q Consensus 218 ~n~tG~~~~ 226 (368)
..-+-.++|
T Consensus 89 G~g~~rlL~ 97 (336)
T 3sr3_A 89 GMNSNSLLP 97 (336)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHhh
Confidence 777777777
No 317
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=23.07 E-value=2.3e+02 Score=20.99 Aligned_cols=49 Identities=12% Similarity=0.207 Sum_probs=33.1
Q ss_pred EEEEEeCCCCCCCCHHHHHHhcc-cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEE
Q 017640 184 NLKFLNLNDDESPDLDKLKEMLS-RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 184 ~v~~v~~~~~~~~d~~~l~~~l~-~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
.+..++-+ ..+.+..++. .++.+|+++.. ..|-+++.++|+++|+.++.
T Consensus 54 ~l~I~~G~-----r~~~~l~a~~~~~~~~iIlt~g------~~~~~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 54 AALVTGGD-----RSDLLLTALEMPNVRCLILTGN------LEPVQLVLTKAEERGVPVIL 103 (139)
T ss_dssp EEEEEETT-----CHHHHHHHTTCTTEEEEEEETT------CCCCHHHHHHHHHHTCCEEE
T ss_pred EEEEEcCC-----HHHHHHHHHhCCCCcEEEEcCC------CCCCHHHHHHHHHCCCeEEE
Confidence 45555443 3344556665 67888888754 34567888999999998874
No 318
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=23.05 E-value=2e+02 Score=22.33 Aligned_cols=32 Identities=6% Similarity=0.113 Sum_probs=21.7
Q ss_pred ccCceEEEEcccccccccccCHHHHHHHHHhcCCEE
Q 017640 206 SRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKV 241 (368)
Q Consensus 206 ~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~l 241 (368)
.++.-+|+++. +|....+-++++.++++|+.+
T Consensus 95 ~~~d~vI~iS~----sG~t~~~~~~~~~ak~~g~~v 126 (183)
T 2xhz_A 95 TPQDVVIAISN----SGESSEITALIPVLKRLHVPL 126 (183)
T ss_dssp CTTCEEEEECS----SSCCHHHHHHHHHHHTTTCCE
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCE
Confidence 34445666665 466666778889999988644
No 319
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=22.99 E-value=1.3e+02 Score=26.89 Aligned_cols=21 Identities=24% Similarity=0.464 Sum_probs=15.8
Q ss_pred HHHHHHHHHhcCCEEEEecCC
Q 017640 227 IEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 227 l~~i~~l~~~~g~~li~D~a~ 247 (368)
++++++.|+++|+.+|+|--+
T Consensus 105 ~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 105 VHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp HHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHCCCEEEEECCC
Confidence 667777788888888887654
No 320
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=22.92 E-value=42 Score=31.33 Aligned_cols=30 Identities=17% Similarity=0.362 Sum_probs=25.1
Q ss_pred ccccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 218 SNMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 218 ~n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
+...|...+++++++-||++|+.||+|.+.
T Consensus 90 dp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 119 (475)
T 2z1k_A 90 DPILGGNEALRHLLEVAHAHGVRVILDGVF 119 (475)
T ss_dssp CGGGTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 334577777999999999999999999984
No 321
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=22.91 E-value=1.4e+02 Score=25.48 Aligned_cols=124 Identities=12% Similarity=0.070 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEe
Q 017640 110 TDEYELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLN 189 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~ 189 (368)
.+.++.+++. ++-+|.+ ++-+.=-......+...+ |.+-+.+.+-.. ..-++.+++ .|. ++.+.
T Consensus 73 ~egl~~l~~~-~~~~Gl~----~~te~~d~~~~~~l~~~v--------d~~kIga~~~~n-~~ll~~~a~-~~k-PV~lk 136 (262)
T 1zco_A 73 EKALRWMREA-ADEYGLV----TVTEVMDTRHVELVAKYS--------DILQIGARNSQN-FELLKEVGK-VEN-PVLLK 136 (262)
T ss_dssp HHHHHHHHHH-HHHHTCE----EEEECCCGGGHHHHHHHC--------SEEEECGGGTTC-HHHHHHHTT-SSS-CEEEE
T ss_pred HHHHHHHHHH-HHHcCCc----EEEeeCCHHhHHHHHhhC--------CEEEECcccccC-HHHHHHHHh-cCC-cEEEe
Confidence 4445555444 4667775 122222223344444432 344454443322 222444433 343 33443
Q ss_pred CCCCCCC-CHHHHHHhcc----c-CceEEEEc----ccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcc
Q 017640 190 LNDDESP-DLDKLKEMLS----R-KTKLVVIH----HISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHM 252 (368)
Q Consensus 190 ~~~~~~~-d~~~l~~~l~----~-~~~~v~~~----~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~ 252 (368)
+|.. +++++..++. . +..++++. ...|.+=...++..+..+.+..++.|++|..|+.|..
T Consensus 137 ---~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~ 206 (262)
T 1zco_A 137 ---RGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRR 206 (262)
T ss_dssp ---CCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSG
T ss_pred ---cCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCcc
Confidence 3332 6777776663 1 33444443 1112233334577887777777999999999997754
No 322
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=22.82 E-value=2.8e+02 Score=23.81 Aligned_cols=83 Identities=11% Similarity=0.126 Sum_probs=42.1
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEEccccccccccc-------
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASIL------- 225 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~------- 225 (368)
.+.|..|++..-.............+..+..+..+..|-. |.+.++++++. +..+|+-+......+...
T Consensus 26 ~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~ 102 (341)
T 3enk_A 26 LAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVS---DERALARIFDAHPITAAIHFAALKAVGESVAKPIEYY 102 (341)
T ss_dssp HHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTT---CHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHH
T ss_pred HHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecC---CHHHHHHHHhccCCcEEEECccccccCccccChHHHH
Confidence 4567777766543333322233333333444445544321 77888888764 456665554433222111
Q ss_pred -----CHHHHHHHHHhcCC
Q 017640 226 -----PIEEIVHWSHDVGA 239 (368)
Q Consensus 226 -----~l~~i~~l~~~~g~ 239 (368)
-...+.+.|+++++
T Consensus 103 ~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 103 RNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 02356777888764
No 323
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=22.79 E-value=2.4e+02 Score=24.17 Aligned_cols=83 Identities=7% Similarity=0.012 Sum_probs=46.1
Q ss_pred CCCCEEEEcCC--CCc-----ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCH
Q 017640 155 KSGDEVILTVA--EHH-----SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPI 227 (368)
Q Consensus 155 ~~gd~vl~~~~--~~~-----s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l 227 (368)
..=|-+++..| ... .....+..+.+...++.+.|... +.+.++++++. +.++ ....|+.-.. +
T Consensus 149 dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvSn~-----~~~~l~~~~~~-~~~~--Q~~~~~~~~~-~- 218 (292)
T 4exb_A 149 DRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGK-----TVEGGLRALRE-GDCA--MVTYNLNERA-E- 218 (292)
T ss_dssp SCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEECS-----SHHHHHHHHHH-SSEE--EEECSSSCCT-T-
T ss_pred CceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeCCC-----CHHHHHHHHHh-hcEE--eeccccccCC-H-
Confidence 33366777777 321 34445555544333444455432 66777777654 3332 2333443222 2
Q ss_pred HHHHHHHHhcCCEEEEecCC
Q 017640 228 EEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 228 ~~i~~l~~~~g~~li~D~a~ 247 (368)
.++.+.|+++|+.++.=..-
T Consensus 219 ~~l~~~~~~~gi~v~a~spL 238 (292)
T 4exb_A 219 RPVIEYAAAHAKGILVKKAL 238 (292)
T ss_dssp HHHHHHHHHTTCEEEEECCS
T ss_pred HHHHHHHHHCCcEEEEeccc
Confidence 78999999999988754433
No 324
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=22.70 E-value=88 Score=25.80 Aligned_cols=112 Identities=7% Similarity=0.046 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEeCCHHHHHHHHHHHccCCCCCCCCE-EEEcCCCCc-ccHHHHHHHHHHcCCEEEEEeC
Q 017640 113 YELARKKVAAFINASDSGEIVFTKNATEAINLVAYSWGLSNLKSGDE-VILTVAEHH-SAIVPWQLVAQKTGANLKFLNL 190 (368)
Q Consensus 113 ~~~~r~~la~~~~~~~~~~v~~t~g~t~a~~~~~~~~~~~~~~~gd~-vl~~~~~~~-s~~~~~~~~~~~~g~~v~~v~~ 190 (368)
++.+.+.+.+.+|.+....+++..-+..+-. ++.... .-..|=. +-+.+.+-. -. .. ....|..+.
T Consensus 68 V~~L~~~i~~~Lg~~~~~~V~IvGaG~lG~a-La~~~~--~~~~g~~iVg~~D~dp~~ki----G~-~~i~GvpV~---- 135 (212)
T 3keo_A 68 VKKLMNFFAEILNDHSTTNVMLVGCGNIGRA-LLHYRF--HDRNKMQISMAFDLDSNDLV----GK-TTEDGIPVY---- 135 (212)
T ss_dssp HHHHHHHHHHHTTTTSCEEEEEECCSHHHHH-HTTCCC--CTTSSEEEEEEEECTTSTTT----TC-BCTTCCBEE----
T ss_pred HHHHHHHHHHHhCCCCCCEEEEECcCHHHHH-HHHhhh--cccCCeEEEEEEeCCchhcc----Cc-eeECCeEEe----
Confidence 4468888889999876546654443333433 232221 1122222 223332211 10 00 001244333
Q ss_pred CCCCCCCHHHHHHhccc-CceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 191 NDDESPDLDKLKEMLSR-KTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 191 ~~~~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
+.+++++.+++ ++..++++.|+. ..+++++.|.+.|+.-|..-+..
T Consensus 136 ------~~~dL~~~v~~~~Id~vIIAvPs~------~aq~v~d~lv~~GIk~I~nFap~ 182 (212)
T 3keo_A 136 ------GISTINDHLIDSDIETAILTVPST------EAQEVADILVKAGIKGILSFSPV 182 (212)
T ss_dssp ------EGGGHHHHC-CCSCCEEEECSCGG------GHHHHHHHHHHHTCCEEEECSSS
T ss_pred ------CHHHHHHHHHHcCCCEEEEecCch------hHHHHHHHHHHcCCCEEEEcCCc
Confidence 24567777765 567777777643 35789999999999888887765
No 325
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=22.66 E-value=1.9e+02 Score=25.80 Aligned_cols=85 Identities=9% Similarity=0.151 Sum_probs=53.9
Q ss_pred CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcccccccccccCHHHHHHH
Q 017640 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHHISNMLASILPIEEIVHW 233 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~~~n~tG~~~~l~~i~~l 233 (368)
.+-+..++.+|..+.....+..+.+..+.. |-.++. ..+..++++.+..+. .+|.+ -+.. |-+....+|+++
T Consensus 213 ~~~~i~~iEeP~~~~d~~~~~~l~~~~~ip---Ia~dE~-~~~~~~~~~~i~~~a~d~v~i-k~~~--GGit~~~~i~~~ 285 (365)
T 3ik4_A 213 ESIPMVLFEQPLPREDWAGMAQVTAQSGFA---VAADES-ARSAHDVLRIAREGTASVINI-KLMK--AGVAEGLKMIAI 285 (365)
T ss_dssp TTCCEEEEECCSCTTCHHHHHHHHHHSSSC---EEESTT-CSSHHHHHHHHHHTCCSEEEE-CHHH--HCHHHHHHHHHH
T ss_pred CCCCceEEECCCCcccHHHHHHHHhhCCCC---EEECCC-CCCHHHHHHHHHhCCCCEEEE-cCCc--cCHHHHHHHHHH
Confidence 333466777887666666677766655432 223333 236777777765543 44444 3333 667778889999
Q ss_pred HHhcCCEEEEecC
Q 017640 234 SHDVGAKVLVDAC 246 (368)
Q Consensus 234 ~~~~g~~li~D~a 246 (368)
|+++|+.+.+=..
T Consensus 286 A~~~gi~~~~~~~ 298 (365)
T 3ik4_A 286 AQAAGLGLMIGGM 298 (365)
T ss_dssp HHHHTCEEEECCS
T ss_pred HHHcCCeEEecCC
Confidence 9999999887544
No 326
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=22.61 E-value=1.6e+02 Score=20.76 Aligned_cols=53 Identities=15% Similarity=0.087 Sum_probs=35.1
Q ss_pred CCHHHHHHhccc-CceEEEEcccccccccccC----HHHHHHHHHhcCCE-EEEecCCc
Q 017640 196 PDLDKLKEMLSR-KTKLVVIHHISNMLASILP----IEEIVHWSHDVGAK-VLVDACQS 248 (368)
Q Consensus 196 ~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~----l~~i~~l~~~~g~~-li~D~a~~ 248 (368)
.+.+.|++.+.+ ++..+++--|-|+.|..-+ .++.++..++.++. .++||-.+
T Consensus 38 ~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 38 EDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 356777777765 7788999988888887766 34444443333665 45787654
No 327
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=22.51 E-value=2.5e+02 Score=25.69 Aligned_cols=96 Identities=10% Similarity=0.160 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHH 216 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~ 216 (368)
..+++..+...+ .+-+..++.+|-.+.....+..+.+...+. |-.++...-+..++++.+..+. .+|.+.
T Consensus 269 ~~~ai~~~~~~l-----~~~~i~~iEeP~~~~d~~~~~~l~~~~~ip---Ia~dE~~~~~~~~~~~~i~~~a~d~i~ik- 339 (427)
T 2pa6_A 269 REELLDYYKALV-----DEYPIVSIEDPFHEEDFEGFAMITKELDIQ---IVGDDLFVTNVERLRKGIEMKAANALLLK- 339 (427)
T ss_dssp HHHHHHHHHHHH-----HHSCEEEEECCSCTTCHHHHHHHHHHSSSE---EEESTTTTTCHHHHHHHHHHTCCSEEEEC-
T ss_pred HHHHHHHHHHHH-----hhCCCcEEEcCCChhhHHHHHHHHhhCCCe---EEeCccccCCHHHHHHHHHhCCCCEEEEc-
Confidence 446666654333 223477899998888888888887765433 3334443335888888886553 344332
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEE
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~ 243 (368)
+ +-.|-+....+++++|+++|+.+++
T Consensus 340 ~-~~~GGitea~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 340 V-NQIGTLSEAVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp H-HHHCSHHHHHHHHHHHHTTTCEEEE
T ss_pred c-cccCCHHHHHHHHHHHHHcCCeEEE
Confidence 2 2356677788999999999998876
No 328
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=22.39 E-value=80 Score=27.66 Aligned_cols=72 Identities=21% Similarity=0.298 Sum_probs=44.6
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcc--cCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLS--RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~--~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
.....+...++..|.++..+..+.+..-..+.++..+. .++..|++... . ....++.+.+++.|+.++ +|.
T Consensus 21 ~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~-~-----~~~~~~~~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 21 SYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNE-Q-----YVAPQILRLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECC-S-----SHHHHHHHHHTTSCCEEEEEES
T ss_pred HHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCc-h-----hhHHHHHHHHHhCCCcEEEEcC
Confidence 34456777788889998887654332112345666776 47777777532 1 124566777888898765 554
Q ss_pred C
Q 017640 246 C 246 (368)
Q Consensus 246 a 246 (368)
.
T Consensus 95 ~ 95 (350)
T 3h75_A 95 P 95 (350)
T ss_dssp C
T ss_pred C
Confidence 3
No 329
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=22.03 E-value=3.4e+02 Score=23.14 Aligned_cols=73 Identities=15% Similarity=-0.015 Sum_probs=42.0
Q ss_pred CcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 167 HHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 167 ~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
|.+....+....+..+..+. -.++.+|...+.++..-...+|.+....- + ...++++.+.|++.|..+++|..
T Consensus 105 f~Gs~~~L~~ir~~v~lPVl----~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L-~--~~~l~~l~~~a~~lGl~~lvevh 177 (272)
T 3tsm_A 105 FQGAPEFLTAARQACSLPAL----RKDFLFDPYQVYEARSWGADCILIIMASV-D--DDLAKELEDTAFALGMDALIEVH 177 (272)
T ss_dssp TCCCHHHHHHHHHTSSSCEE----EESCCCSTHHHHHHHHTTCSEEEEETTTS-C--HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCHHHHHHHHHhcCCCEE----ECCccCCHHHHHHHHHcCCCEEEEccccc-C--HHHHHHHHHHHHHcCCeEEEEeC
Confidence 33555555554433333332 13466677777766655555555544311 0 12277888889999999888764
No 330
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=21.96 E-value=39 Score=33.61 Aligned_cols=26 Identities=15% Similarity=0.312 Sum_probs=22.0
Q ss_pred cccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 223 SILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 223 ~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
....++++++-||++|+-||+|.++.
T Consensus 253 ~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 253 RIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred hHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 34568899999999999999999853
No 331
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=21.67 E-value=1.1e+02 Score=22.08 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=35.4
Q ss_pred cCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEecCc
Q 017640 207 RKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSH 269 (368)
Q Consensus 207 ~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~ 269 (368)
+..+++++|...-.|+.. ..++.+.++++|+-+-+.+. +.+. ++-...++|++..+.+
T Consensus 5 ~~mkIlL~C~aGmSTsll--v~km~~~a~~~gi~v~i~a~-~~~~--~~~~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 5 KELKVLVLCAGSGTSAQL--ANAINEGANLTEVRVIANSG-AYGA--HYDIMGVYDLIILAPQ 62 (108)
T ss_dssp CCEEEEEEESSSSHHHHH--HHHHHHHHHHHTCSEEEEEE-ETTS--CTTTGGGCSEEEECGG
T ss_pred cCceEEEECCCCCCHHHH--HHHHHHHHHHCCCceEEEEc-chHH--HHhhccCCCEEEEChH
Confidence 455788888876666554 57888889999987665542 1121 1111124677776654
No 332
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=21.59 E-value=1.1e+02 Score=23.09 Aligned_cols=42 Identities=12% Similarity=0.245 Sum_probs=28.0
Q ss_pred HHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 200 KLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 200 ~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
.++++++..++.+++.. |. .-+++.++|+++|+.++-+.+.+
T Consensus 93 vv~~~~~~gi~~i~~~~-----g~--~~~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 93 YVEQAIKKGAKVVWFQY-----NT--YNREASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHTCSEEEECT-----TC--CCHHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHcCCCEEEECC-----Cc--hHHHHHHHHHHcCCEEEcCCchh
Confidence 34444445666665442 22 26889999999999988777644
No 333
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=21.54 E-value=45 Score=31.27 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=26.2
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
++...|...+++++++-||++|+.||+|.+.-
T Consensus 90 id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (484)
T 2aaa_A 90 VNSNFGTADNLKSLSDALHARGMYLMVDVVPD 121 (484)
T ss_dssp ECTTTCCHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 33446777779999999999999999999843
No 334
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=21.52 E-value=1.9e+02 Score=26.15 Aligned_cols=86 Identities=10% Similarity=0.158 Sum_probs=57.2
Q ss_pred CCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHH
Q 017640 155 KSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWS 234 (368)
Q Consensus 155 ~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~ 234 (368)
.+-+..++.+|..+.....+..+.+..+. .|-.++.- .+..++++.+..+..-++..-+.. |-+....+|+++|
T Consensus 214 ~~~~i~~iEeP~~~~d~~~~~~l~~~~~i---PIa~dEs~-~~~~~~~~~i~~~a~d~v~~k~~~--GGit~~~~i~~~A 287 (389)
T 3s5s_A 214 LGADVALLEQPVPRDDWDGMKEVTRRAGV---DVAADESA-ASAEDVLRVAAERAATVVNIKLMK--GGIAEALDIAAVA 287 (389)
T ss_dssp TTCEEEEEECCSCTTCHHHHHHHHHHSSS---CEEESTTC-SSHHHHHHHHHTTCCSEEEECHHH--HHHHHHHHHHHHH
T ss_pred CCCCeEEEECCCCcccHHHHHHHHhhCCC---CEEECCCC-CCHHHHHHHHHcCCCCEEEecCCC--CCHHHHHHHHHHH
Confidence 33346688888877777778887766553 33334443 367788887765533333333433 6677788899999
Q ss_pred HhcCCEEEEecC
Q 017640 235 HDVGAKVLVDAC 246 (368)
Q Consensus 235 ~~~g~~li~D~a 246 (368)
+++|+.+.+-..
T Consensus 288 ~~~gi~~~~~~~ 299 (389)
T 3s5s_A 288 RAAGLGLMIGGM 299 (389)
T ss_dssp HHTTCEEEECCS
T ss_pred HHcCCeEEecCC
Confidence 999999987654
No 335
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=21.50 E-value=97 Score=26.29 Aligned_cols=73 Identities=12% Similarity=0.256 Sum_probs=40.3
Q ss_pred ccHHHHHHHHHHcCCEEEEEe-CCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-EecC
Q 017640 169 SAIVPWQLVAQKTGANLKFLN-LNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDAC 246 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~-~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~a 246 (368)
.....+...++..|.++..+. ...+..--.+.++..+..+...|++...... ...+..+.+++.|++++ +|..
T Consensus 21 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~~iPvV~~~~~ 95 (305)
T 3g1w_A 21 RCLKGFEDAAQALNVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPV-----ELTDTINKAVDAGIPIVLFDSG 95 (305)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTT-----TTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHH-----HHHHHHHHHHHCCCcEEEECCC
Confidence 344566777788899887743 2221111123355555567777777554221 23445566677787554 5543
No 336
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=21.46 E-value=1.7e+02 Score=24.49 Aligned_cols=17 Identities=6% Similarity=-0.038 Sum_probs=8.6
Q ss_pred HHHHHHHHcCCEEEEEe
Q 017640 173 PWQLVAQKTGANLKFLN 189 (368)
Q Consensus 173 ~~~~~~~~~g~~v~~v~ 189 (368)
.+...++..|.++....
T Consensus 29 gi~~~a~~~g~~~~~~~ 45 (290)
T 2rgy_A 29 QTDLELRAVHRHVVVAT 45 (290)
T ss_dssp HHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHCCCEEEEEe
Confidence 34444555565555443
No 337
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=21.40 E-value=1.2e+02 Score=26.17 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=40.0
Q ss_pred cHHHHHHHHHHcCCEEEEE-eCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 170 AIVPWQLVAQKTGANLKFL-NLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v-~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
....+...++..|.++... +...+..--.+.++..+..+...|++...... .+..+.+.+++.|++++ +|.
T Consensus 21 ~~~g~~~~~~~~g~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~-----~~~~~~~~a~~~gipvV~~d~ 93 (316)
T 1tjy_A 21 GGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPD-----GLCPALKRAMQRGVKILTWDS 93 (316)
T ss_dssp HHHHHHHHHHHHTCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSS-----TTHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHH-----HHHHHHHHHHHCcCEEEEecC
Confidence 3345566677788887654 22211111124466667677888777654221 23455666778898765 443
No 338
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=21.34 E-value=1.1e+02 Score=25.97 Aligned_cols=73 Identities=14% Similarity=0.148 Sum_probs=42.6
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCC--CCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLND--DESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
.....+...++..|.++.....+. +..-..+.++..+..+...|++...... .+.+..+.+++.|++++ +|.
T Consensus 20 ~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~-----~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 20 SLFQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDT-----AFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSS-----TTHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHH-----HHHHHHHHHHHCCCCEEEEcC
Confidence 344567777888899988776431 1111124455566667877777544221 23555666777887655 554
Q ss_pred C
Q 017640 246 C 246 (368)
Q Consensus 246 a 246 (368)
.
T Consensus 95 ~ 95 (297)
T 3rot_A 95 R 95 (297)
T ss_dssp C
T ss_pred C
Confidence 3
No 339
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=21.32 E-value=52 Score=31.97 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=25.2
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
...|...+++++++-||++|+.||+|.+.
T Consensus 203 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 203 TKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 34677778999999999999999999983
No 340
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=21.23 E-value=41 Score=31.56 Aligned_cols=28 Identities=25% Similarity=0.353 Sum_probs=23.8
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
..|...+++++++-||++|+.||+|.+.
T Consensus 98 ~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 125 (488)
T 2wc7_A 98 MLGGNEAFKELLDAAHQRNIKVVLDGVF 125 (488)
T ss_dssp GGTHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3566777999999999999999999884
No 341
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=21.15 E-value=1.3e+02 Score=23.79 Aligned_cols=60 Identities=12% Similarity=0.074 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---C--ceEEEEcccccccccccCHHHHHH
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---K--TKLVVIHHISNMLASILPIEEIVH 232 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~--~~~v~~~~~~n~tG~~~~l~~i~~ 232 (368)
+...+....+..|.++....+-+| |.+.+++++.. + ..+|+++....++-.-+..+.+.+
T Consensus 41 n~~~L~~~l~~~G~~v~~~~iv~D---d~~~I~~al~~a~~~~~~DlVittGG~s~g~~D~t~eal~~ 105 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIGYSLVPD---DKIKILKAFTDALSIDEVDVIISTGGTGYSPTDITVETIRK 105 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEECS---CHHHHHHHHHHHHTCTTCCEEEEESCCSSSTTCCHHHHHGG
T ss_pred HHHHHHHHHHHCCCEEEEEEEeCC---CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcchHHHHHH
Confidence 444567777888999877665555 56666665532 2 678888887666543222444433
No 342
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=21.12 E-value=3.8e+02 Score=24.61 Aligned_cols=131 Identities=11% Similarity=0.100 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHcCCCC--------CCcEEEeCC-----HHHHHHHHHHHccCCCCCCCCEE-EEcCCCC-cccHHHH
Q 017640 110 TDEYELARKKVAAFINASD--------SGEIVFTKN-----ATEAINLVAYSWGLSNLKSGDEV-ILTVAEH-HSAIVPW 174 (368)
Q Consensus 110 ~~~~~~~r~~la~~~~~~~--------~~~v~~t~g-----~t~a~~~~~~~~~~~~~~~gd~v-l~~~~~~-~s~~~~~ 174 (368)
....+.+.+.+.++++... ...++...| =|..+..++..+ ...|..| ++....| ++....+
T Consensus 69 ~~v~~~v~~eL~~~L~~~~~~~~~~~~~~~vI~lvG~~GsGKTTt~~kLA~~l----~~~G~kVllv~~D~~r~~a~eqL 144 (433)
T 3kl4_A 69 EWFISIVYDELSKLFGGDKEPNVNPTKLPFIIMLVGVQGSGKTTTAGKLAYFY----KKRGYKVGLVAADVYRPAAYDQL 144 (433)
T ss_dssp HHHHHHHHHHHHHHHCSSSCCCCSCCSSSEEEEECCCTTSCHHHHHHHHHHHH----HHTTCCEEEEEECCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccccccccccCCCeEEEEECCCCCCHHHHHHHHHHHH----HHcCCeEEEEecCccchhHHHHH
Confidence 4456667888888887531 113443332 344444444444 2334444 4443333 3444445
Q ss_pred HHHHHHcCCEEEEEeCCCCCCCCHH-----HHHHhcccCceEEEEcccccccccccC--HHHHHHH---HHhcCCEEEEe
Q 017640 175 QLVAQKTGANLKFLNLNDDESPDLD-----KLKEMLSRKTKLVVIHHISNMLASILP--IEEIVHW---SHDVGAKVLVD 244 (368)
Q Consensus 175 ~~~~~~~g~~v~~v~~~~~~~~d~~-----~l~~~l~~~~~~v~~~~~~n~tG~~~~--l~~i~~l---~~~~g~~li~D 244 (368)
...++..|..+.... . ..|+. .++.+...+..+|++..+....-...+ +.++.++ .+...+++++|
T Consensus 145 ~~~~~~~gv~~~~~~---~-~~dp~~i~~~al~~a~~~~~DvvIIDTaGr~~~~~d~~lm~el~~i~~~~~pd~vlLVlD 220 (433)
T 3kl4_A 145 LQLGNQIGVQVYGEP---N-NQNPIEIAKKGVDIFVKNKMDIIIVDTAGRHGYGEETKLLEEMKEMYDVLKPDDVILVID 220 (433)
T ss_dssp HHHHHTTTCCEECCT---T-CSCHHHHHHHHHHHTTTTTCSEEEEEECCCSSSCCTTHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred HHHHHhcCCceeecc---c-cCCHHHHHHHHHHHHHhcCCCEEEEECCCCccccCCHHHHHHHHHHHHhhCCcceEEEEe
Confidence 555565565443221 1 12433 233333346788888876321100112 4444444 44467899999
Q ss_pred cCCc
Q 017640 245 ACQS 248 (368)
Q Consensus 245 ~a~~ 248 (368)
+..+
T Consensus 221 a~~g 224 (433)
T 3kl4_A 221 ASIG 224 (433)
T ss_dssp GGGG
T ss_pred Cccc
Confidence 9864
No 343
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.07 E-value=3.3e+02 Score=21.90 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=35.5
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc------CceEEEEcccccccc
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR------KTKLVVIHHISNMLA 222 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~n~tG 222 (368)
.+.|-.|++..............+.+..+.++..+..|-. |.+.+++.++. +..+++-+......+
T Consensus 23 ~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~ 94 (235)
T 3l77_A 23 ARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS---KAESVEEFSKKVLERFGDVDVVVANAGLGYFK 94 (235)
T ss_dssp HHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT---CHHHHHHHCC-HHHHHSSCSEEEECCCCCCCC
T ss_pred HHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccC---CHHHHHHHHHHHHHhcCCCCEEEECCcccccc
Confidence 5667777766553222222222232244677777776532 67777777653 456666665544433
No 344
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=20.94 E-value=3.8e+02 Score=22.66 Aligned_cols=54 Identities=22% Similarity=0.237 Sum_probs=33.1
Q ss_pred cCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcC-CEEEE
Q 017640 181 TGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVG-AKVLV 243 (368)
Q Consensus 181 ~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g-~~li~ 243 (368)
.|++++..++. |.+.++++++. ..+|+.+.... . +.-...+.+.|++.| +.-++
T Consensus 58 ~~v~~v~~Dl~-----d~~~l~~a~~~-~d~vi~~a~~~--~-~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 58 LGAIIVKGELD-----EHEKLVELMKK-VDVVISALAFP--Q-ILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp TTCEEEECCTT-----CHHHHHHHHTT-CSEEEECCCGG--G-STTHHHHHHHHHHHCCCCEEE
T ss_pred CCCEEEEecCC-----CHHHHHHHHcC-CCEEEECCchh--h-hHHHHHHHHHHHhcCCCCEEE
Confidence 47777665554 78889888864 44444333211 1 333678888898887 64333
No 345
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=20.88 E-value=2.7e+02 Score=25.63 Aligned_cols=99 Identities=11% Similarity=0.197 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHH 216 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~ 216 (368)
..+++..+-..+ .+=+.+++.+|-.......|..+.+..+..+-.+- ++...-++..+++.++.+. .+|.+ -
T Consensus 265 ~~eai~~~~~ll-----~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivG-Del~vt~~~~~~~~i~~~a~d~i~i-K 337 (428)
T 3tqp_A 265 SEEMIDRLTEWT-----KKYPVISIEDGLSENDWAGWKLLTERLENKVQLVG-DDIFVTNPDILEKGIKKNIANAILV-K 337 (428)
T ss_dssp HHHHHHHHHHHH-----HHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEE-STTTTTCHHHHHHHHHTTCCSEEEE-C
T ss_pred HHHHHHHHHHHH-----hhcccceEeCCCCcccHHHHHHHHHhcCCCcceec-cccccCCHHHHHHHHHhCCCCEEEe-c
Confidence 355565554322 23347889999888888889998887774332221 2223336788888886653 33332 2
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
+ |-.|.+....+++++|+++|+.+++=
T Consensus 338 v-~~iGGiTealkia~lA~~~G~~~~v~ 364 (428)
T 3tqp_A 338 L-NQIGTLTETLATVGLAKSNKYGVIIS 364 (428)
T ss_dssp H-HHHCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred c-cccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 2 34577777889999999999987653
No 346
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=20.85 E-value=49 Score=31.86 Aligned_cols=28 Identities=7% Similarity=0.177 Sum_probs=24.2
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
..|...+++++++-||++|+.||+|.+.
T Consensus 88 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 115 (570)
T 1m53_A 88 EYGTMEDFDSLVAEMKKRNMRLMIDVVI 115 (570)
T ss_dssp GGCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3577777999999999999999999984
No 347
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.78 E-value=1.8e+02 Score=25.41 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=49.8
Q ss_pred HHHHHHhcccCc-eEEEEccccccccccc--CHHHHHHHHHhcCCEEEEecCCcCCcccccCCCCCccEEEe-cCcCcC-
Q 017640 198 LDKLKEMLSRKT-KLVVIHHISNMLASIL--PIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVA-SSHKMC- 272 (368)
Q Consensus 198 ~~~l~~~l~~~~-~~v~~~~~~n~tG~~~--~l~~i~~l~~~~g~~li~D~a~~~~~~~~~~~~~~~d~~~~-s~~K~~- 272 (368)
...|++.++.+. -+.+++++..|.|.-. .-..+.++|+++|+.++.-.........-.+....+|+++. ++.+.+
T Consensus 15 ~~~L~~L~~~~~~v~~Vvt~pd~~~grg~~l~~~~v~~~A~~~gIpv~~~~~~~~~~~~~~l~~~~~Dliv~~~~~~ilp 94 (314)
T 3tqq_A 15 VPTLRALIDSSHRVLAVYTQPDRPSGRGQKIMESPVKEIARQNEIPIIQPFSLRDEVEQEKLIAMNADVMVVVAYGLILP 94 (314)
T ss_dssp HHHHHHHHHSSSEEEEEECCCC----------CCHHHHHHHHTTCCEECCSCSSSHHHHHHHHTTCCSEEEEESCCSCCC
T ss_pred HHHHHHHHHCCCeEEEEEeCCCCccccCCccCCCHHHHHHHHcCCCEECcccCCCHHHHHHHHhcCCCEEEEcCcccccC
Confidence 345666555433 4456777888876432 23357788999999976321111000100134567887776 555544
Q ss_pred ----CCCcceEEEEcccccccCC
Q 017640 273 ----GPTGIGFLFGKSDLLSAMP 291 (368)
Q Consensus 273 ----g~~G~G~l~~~~~li~~l~ 291 (368)
..+..|++-+.+.++.+.+
T Consensus 95 ~~il~~~~~g~iNiHpSlLP~yR 117 (314)
T 3tqq_A 95 KKALNAFRLGCVNVHASLLPRWR 117 (314)
T ss_dssp HHHHTSSTTCEEEEESSCTTTTB
T ss_pred HHHHhhCcCCEEEecCccccCCC
Confidence 3334688989998876554
No 348
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=20.49 E-value=1.6e+02 Score=22.65 Aligned_cols=55 Identities=18% Similarity=0.214 Sum_probs=37.7
Q ss_pred CCCCHHHHHHhccc-CceEEEEcccccccccccC-H---HHHH-HHHHhcCCE-EEEecCCc
Q 017640 194 ESPDLDKLKEMLSR-KTKLVVIHHISNMLASILP-I---EEIV-HWSHDVGAK-VLVDACQS 248 (368)
Q Consensus 194 ~~~d~~~l~~~l~~-~~~~v~~~~~~n~tG~~~~-l---~~i~-~l~~~~g~~-li~D~a~~ 248 (368)
...+.+.|.+.+.+ ++..|++.-|-|..|..-+ . +..+ .++++.++. .++||.++
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~T 101 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLT 101 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSC
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCC
Confidence 34478889888876 6788888888777776655 2 3444 344455764 56899987
No 349
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=20.46 E-value=5.1e+02 Score=23.92 Aligned_cols=99 Identities=13% Similarity=0.228 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCc-eEEEEcc
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKT-KLVVIHH 216 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~-~~v~~~~ 216 (368)
..+++..+-..+ .+=+.+++.+|-.......+..+.+..+..+-.+ .++...-++..+++.++.+. .+|.+.
T Consensus 291 ~~eai~~~~~ll-----e~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~-gDE~~~tn~~~~~~~i~~~a~d~i~iK- 363 (449)
T 3uj2_A 291 SEELVAHWKSLC-----ERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLV-GDDLFVTNTERLNKGIKERCGNSILIK- 363 (449)
T ss_dssp HHHHHHHHHHHH-----HHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEE-ESTTTTTCHHHHHHHHHTTCCSEEEEC-
T ss_pred HHHHHHHHHHHH-----HhcCceEEECCCCcchHHHHHHHHHHhCCCceEE-CCcceeCCHHHHHHHHHcCCCCEEEEC-
Confidence 345565543322 2334788889988888888998888775433212 12222215888888887654 333332
Q ss_pred cccccccccCHHHHHHHHHhcCCEEEEe
Q 017640 217 ISNMLASILPIEEIVHWSHDVGAKVLVD 244 (368)
Q Consensus 217 ~~n~tG~~~~l~~i~~l~~~~g~~li~D 244 (368)
+ +-.|-+....+++++|+++|+.+++=
T Consensus 364 v-~~iGGiTea~kia~lA~~~Gi~~~v~ 390 (449)
T 3uj2_A 364 L-NQIGTVSETLEAIKMAHKAGYTAVVS 390 (449)
T ss_dssp H-HHHCSHHHHHHHHHHHHHTTCEEEEE
T ss_pred c-cccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 2 34566777889999999999986653
No 350
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=20.43 E-value=53 Score=31.49 Aligned_cols=29 Identities=10% Similarity=0.228 Sum_probs=24.8
Q ss_pred cccccccCHHHHHHHHHhcCCEEEEecCC
Q 017640 219 NMLASILPIEEIVHWSHDVGAKVLVDACQ 247 (368)
Q Consensus 219 n~tG~~~~l~~i~~l~~~~g~~li~D~a~ 247 (368)
...|...+++++++.||++|+.||+|.+.
T Consensus 74 p~~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 102 (557)
T 1zja_A 74 KEYGTMEDFDRLMAELKKRGMRLMVDVVI 102 (557)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 34577777999999999999999999984
No 351
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=20.39 E-value=74 Score=26.44 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=35.0
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Eec
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDA 245 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~ 245 (368)
....+...++..|.++..+..+.+..-..+.++..+..+...|++....... .+..+.+++.|++++ +|.
T Consensus 20 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~------~~~~~~~~~~~iPvV~~~~ 90 (272)
T 3o74_A 20 IAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPE------DDSYRELQDKGLPVIAIDR 90 (272)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSS------CCHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc------HHHHHHHHHcCCCEEEEcc
Confidence 4455666677778887776654321111223444445566666665442111 123344556676544 443
No 352
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=20.37 E-value=3.4e+02 Score=23.42 Aligned_cols=48 Identities=8% Similarity=0.144 Sum_probs=30.4
Q ss_pred CCHHHHHHhccc-----Cce--EEEEcccccccccc--cC--------HHHHHHHHHhcCCEEEE
Q 017640 196 PDLDKLKEMLSR-----KTK--LVVIHHISNMLASI--LP--------IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 196 ~d~~~l~~~l~~-----~~~--~v~~~~~~n~tG~~--~~--------l~~i~~l~~~~g~~li~ 243 (368)
++++.+.+.+.. +++ +|++.+.+...... .. +..|..+|+++|+.+++
T Consensus 162 ~~~~~i~~~i~~l~~~~~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~ 226 (315)
T 3bh0_A 162 QSVNYIWSKTRQTKRKNPGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 226 (315)
T ss_dssp CBHHHHHHHHHHHHHTSSSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 467777655432 467 89998887654321 11 34677788899987665
No 353
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=20.33 E-value=68 Score=27.03 Aligned_cols=72 Identities=11% Similarity=0.191 Sum_probs=41.8
Q ss_pred cHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-EecC
Q 017640 170 AIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VDAC 246 (368)
Q Consensus 170 ~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D~a 246 (368)
....+...++..|.++.......+..-..+.++..+..+...|++..... ....+..+.+++.|++++ +|..
T Consensus 23 ~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-----~~~~~~~~~~~~~~iPvV~~~~~ 95 (291)
T 3l49_A 23 AYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNL-----DVLNPWLQKINDAGIPLFTVDTA 95 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCH-----HHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-----hhhHHHHHHHHHCCCcEEEecCC
Confidence 44567777788899888876543211113445555566777777654321 124455666777787544 5543
No 354
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=20.22 E-value=2.5e+02 Score=22.66 Aligned_cols=60 Identities=13% Similarity=0.077 Sum_probs=31.8
Q ss_pred CCCCCEEEEcCCCCcccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc---CceEEEEcccccc
Q 017640 154 LKSGDEVILTVAEHHSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR---KTKLVVIHHISNM 220 (368)
Q Consensus 154 ~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~---~~~~v~~~~~~n~ 220 (368)
.+.|..|++... .........+..+.++..+..|-. |.+.+++.++. ...+++-+.....
T Consensus 22 ~~~G~~V~~~~r----~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~d~lv~~Ag~~~ 84 (230)
T 3guy_A 22 DAEGKATYLTGR----SESKLSTVTNCLSNNVGYRARDLA---SHQEVEQLFEQLDSIPSTVVHSAGSGY 84 (230)
T ss_dssp HHTTCCEEEEES----CHHHHHHHHHTCSSCCCEEECCTT---CHHHHHHHHHSCSSCCSEEEECCCCCC
T ss_pred HHCCCEEEEEeC----CHHHHHHHHHHHhhccCeEeecCC---CHHHHHHHHHHHhhcCCEEEEeCCcCC
Confidence 456766666654 334455555555556666655422 56666665543 3345554444333
No 355
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=20.22 E-value=42 Score=30.88 Aligned_cols=29 Identities=28% Similarity=0.377 Sum_probs=25.2
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
..|...+++++++-||++|+.||+|.+..
T Consensus 70 ~~G~~~d~~~lv~~~h~~Gi~VilD~V~N 98 (422)
T 1ua7_A 70 YLGTEQEFKEMCAAAEEYGIKVIVDAVIN 98 (422)
T ss_dssp TTEEHHHHHHHHHHHHTTTCEEEEEECCS
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 35777889999999999999999999843
No 356
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=20.16 E-value=1e+02 Score=26.17 Aligned_cols=70 Identities=17% Similarity=0.121 Sum_probs=41.7
Q ss_pred ccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhcccCceEEEEcccccccccccCHHHHHHHHHhcCCEEE-Ee
Q 017640 169 SAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVL-VD 244 (368)
Q Consensus 169 s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~n~tG~~~~l~~i~~l~~~~g~~li-~D 244 (368)
.....+...++..|.++..+... +..-..+.++..+..+...|++...... ......+.+++.|++++ +|
T Consensus 19 ~~~~gi~~~a~~~g~~~~~~~~~-~~~~~~~~i~~l~~~~vdgiii~~~~~~-----~~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 19 TEWKFADKAGKDLGFEVIKIAVP-DGEKTLNAIDSLAASGAKGFVICTPDPK-----LGSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHHHHHHTEEEEEEECC-SHHHHHHHHHHHHHTTCCEEEEECSCGG-----GHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEeCCC-CHHHHHHHHHHHHHcCCCEEEEeCCCch-----hhHHHHHHHHHCCCcEEEeC
Confidence 34456677778889888776542 1111123455566667777777654221 24555566778898765 56
No 357
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=20.13 E-value=1.3e+02 Score=26.68 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=32.4
Q ss_pred CCCHHHHHHhcc----c--CceEEEEcccccccccc------cC----HHHHHHHHHhcCCEEEE
Q 017640 195 SPDLDKLKEMLS----R--KTKLVVIHHISNMLASI------LP----IEEIVHWSHDVGAKVLV 243 (368)
Q Consensus 195 ~~d~~~l~~~l~----~--~~~~v~~~~~~n~tG~~------~~----l~~i~~l~~~~g~~li~ 243 (368)
.++++.|++.+. . ++.+|++.+.+...+.. .. .+.|..+|+++|+.|++
T Consensus 137 ~~si~~i~~~ir~l~~~~gg~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~ 201 (338)
T 4a1f_A 137 YVRIEQIRLQLRKLKSQHKELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIA 201 (338)
T ss_dssp TCCHHHHHHHHHHHHHHCTTEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCcHHHHHHHHHHHHHhcCCCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 346777766653 2 57888888887665422 11 35677788899987764
No 358
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=20.06 E-value=52 Score=31.81 Aligned_cols=29 Identities=17% Similarity=0.398 Sum_probs=25.0
Q ss_pred ccccccCHHHHHHHHHhcCCEEEEecCCc
Q 017640 220 MLASILPIEEIVHWSHDVGAKVLVDACQS 248 (368)
Q Consensus 220 ~tG~~~~l~~i~~l~~~~g~~li~D~a~~ 248 (368)
..|...+++++++-||++|+.||+|.+..
T Consensus 218 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 218 HFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp TTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred cCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 35667779999999999999999999854
No 359
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=20.03 E-value=4.2e+02 Score=22.75 Aligned_cols=158 Identities=9% Similarity=-0.033 Sum_probs=75.2
Q ss_pred eccCCCCCCcHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHHHHHHHHc---CCCCCCcEEEeCC----------
Q 017640 71 LDNAATSQKPIAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYELARKKVAAFI---NASDSGEIVFTKN---------- 137 (368)
Q Consensus 71 l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~---~~~~~~~v~~t~g---------- 137 (368)
+..|......+...+.+..+++.....-+.. .. |+. .+.+-+.+.+.+ +.+.+ ++++++=
T Consensus 29 lglGt~~~~~~~~~~~v~~Al~~Gi~~~DTA-~~--Yg~---E~~vG~al~~~~~~~~~~R~-~v~I~TK~~~~~~~~~~ 101 (298)
T 1vp5_A 29 LGYGVFQIPPEKTEECVYEAIKVGYRLIDTA-AS--YMN---EEGVGRAIKRAIDEGIVRRE-ELFVTTKLWVSDVGYES 101 (298)
T ss_dssp BCEECTTCCHHHHHHHHHHHHHHTCCEEECC-GG--GTC---HHHHHHHHHHHHHTTSCCGG-GCEEEEEECGGGCSSHH
T ss_pred eeEeCCcCChHHHHHHHHHHHHcCCCEEECC-Cc--ccC---HHHHHHHHHHhhhccCCChh-hEEEEeccCCCCCCHHH
Confidence 3344444344567777777776422111111 11 111 223555555543 44333 5554431
Q ss_pred HHHHHHHHHHHccCCCCCCCCEEEEcCCCC--cccHHHHHHHHHHcCCEEEEEeCCCCCCCCHHHHHHhccc-CceEEEE
Q 017640 138 ATEAINLVAYSWGLSNLKSGDEVILTVAEH--HSAIVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSR-KTKLVVI 214 (368)
Q Consensus 138 ~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~--~s~~~~~~~~~~~~g~~v~~v~~~~~~~~d~~~l~~~l~~-~~~~v~~ 214 (368)
...++...+.-+ ....=|-+++..|.. ......+..+.+...++-+.|..- +.+.+++++.. ..+..+.
T Consensus 102 v~~~~~~SL~rL---g~dyiDl~llH~p~~~~~e~~~al~~l~~~Gkir~iGvSn~-----~~~~l~~~~~~~~~~p~v~ 173 (298)
T 1vp5_A 102 TKKAFEKSLKKL---QLEYIDLYLIHQPFGDVHCAWKAMEEMYKDGLVRAIGVSNF-----YPDRLMDLMVHHEIVPAVN 173 (298)
T ss_dssp HHHHHHHHHHHH---TCSCEEEEEECSSCSCHHHHHHHHHHHHHTTSEEEEEEESC-----CHHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHH---CCCcEEEEEecCCCCCHHHHHHHHHHHHHcCCccEEEecCC-----CHHHHHHHHHhCCCCceEE
Confidence 122344444444 233346677777653 223334444433323344444432 56777776653 2211222
Q ss_pred cccccccccccCHHHHHHHHHhcCCEEEEecC
Q 017640 215 HHISNMLASILPIEEIVHWSHDVGAKVLVDAC 246 (368)
Q Consensus 215 ~~~~n~tG~~~~l~~i~~l~~~~g~~li~D~a 246 (368)
....|+.- .-.++.+.|+++|+.++.=..
T Consensus 174 Q~~~~~~~---~~~~l~~~~~~~gI~v~a~sp 202 (298)
T 1vp5_A 174 QIEIHPFY---QRQEEIEFMRNYNIQPEAWGP 202 (298)
T ss_dssp EEECBTTB---CCHHHHHHHHHTTCEEEEEST
T ss_pred EEeccccc---CCHHHHHHHHHCCCEEEEecc
Confidence 22334321 226899999999998875433
Done!