Query 017642
Match_columns 368
No_of_seqs 796 out of 1920
Neff 10.9
Searched_HMMs 29240
Date Mon Mar 25 17:44:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 8.9E-39 3E-43 278.7 32.3 250 79-341 7-266 (304)
2 3ow8_A WD repeat-containing pr 100.0 8.4E-39 2.9E-43 280.9 32.1 250 79-340 26-285 (321)
3 1vyh_C Platelet-activating fac 100.0 7.9E-39 2.7E-43 290.6 31.3 250 78-341 101-376 (410)
4 3ow8_A WD repeat-containing pr 100.0 2E-38 7E-43 278.4 32.9 239 80-332 75-319 (321)
5 4gqb_B Methylosome protein 50; 100.0 2.8E-38 9.7E-43 279.8 30.4 243 82-336 79-333 (344)
6 1vyh_C Platelet-activating fac 100.0 5.2E-38 1.8E-42 285.2 31.0 243 79-333 144-410 (410)
7 1got_B GT-beta; complex (GTP-b 100.0 4.5E-37 1.5E-41 272.2 35.6 251 78-340 48-307 (340)
8 1got_B GT-beta; complex (GTP-b 100.0 1.3E-36 4.6E-41 269.1 33.6 239 80-331 92-340 (340)
9 4gqb_B Methylosome protein 50; 100.0 1.5E-37 5.2E-42 275.1 27.2 243 82-337 27-292 (344)
10 4g56_B MGC81050 protein; prote 100.0 7.5E-38 2.6E-42 278.9 24.5 247 81-338 90-347 (357)
11 3frx_A Guanine nucleotide-bind 100.0 2.8E-36 9.5E-41 264.7 33.7 247 80-335 12-318 (319)
12 2pbi_B Guanine nucleotide-bind 100.0 1.7E-36 5.7E-41 270.0 31.3 253 77-339 56-320 (354)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.8E-36 2E-40 265.6 32.3 248 80-337 10-286 (345)
14 2pm7_B Protein transport prote 100.0 4E-36 1.4E-40 261.0 30.2 247 80-334 4-285 (297)
15 1erj_A Transcriptional repress 100.0 9.1E-36 3.1E-40 269.1 33.1 239 84-336 122-391 (393)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-35 4.4E-40 263.4 31.5 249 81-339 57-340 (345)
17 1nr0_A Actin interacting prote 100.0 1.2E-35 4.1E-40 283.2 32.2 252 78-337 52-358 (611)
18 2xzm_R RACK1; ribosome, transl 100.0 5.5E-35 1.9E-39 259.1 34.1 248 79-339 15-290 (343)
19 3bg1_A Protein SEC13 homolog; 100.0 4.1E-36 1.4E-40 263.3 26.4 245 80-334 8-293 (316)
20 4g56_B MGC81050 protein; prote 100.0 3.1E-36 1.1E-40 268.4 25.0 245 82-338 39-305 (357)
21 2hes_X YDR267CP; beta-propelle 100.0 3.5E-35 1.2E-39 258.9 30.9 242 83-334 56-328 (330)
22 3iz6_a 40S ribosomal protein R 100.0 1.4E-35 4.7E-40 266.7 28.4 253 78-337 59-378 (380)
23 1erj_A Transcriptional repress 100.0 5.9E-35 2E-39 263.7 32.6 245 83-341 62-348 (393)
24 2pbi_B Guanine nucleotide-bind 100.0 6.9E-35 2.4E-39 259.5 32.0 240 80-331 101-354 (354)
25 4ery_A WD repeat-containing pr 100.0 1.1E-34 3.9E-39 253.6 32.3 254 79-344 17-278 (312)
26 3vu4_A KMHSV2; beta-propeller 100.0 1E-34 3.4E-39 258.6 31.5 241 81-337 15-274 (355)
27 2hes_X YDR267CP; beta-propelle 100.0 2.1E-34 7.3E-39 253.9 31.6 243 80-335 9-281 (330)
28 4aow_A Guanine nucleotide-bind 100.0 5.4E-34 1.8E-38 251.8 33.8 250 80-337 33-340 (340)
29 4h5i_A Guanine nucleotide-exch 100.0 4.3E-34 1.5E-38 255.3 32.8 194 132-335 136-344 (365)
30 2ynn_A Coatomer subunit beta'; 100.0 2.4E-34 8.1E-39 250.7 30.3 243 80-335 50-303 (304)
31 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-34 4.6E-39 255.8 29.2 248 79-338 5-341 (351)
32 2ymu_A WD-40 repeat protein; u 100.0 3.6E-34 1.2E-38 271.2 32.3 235 79-331 338-577 (577)
33 2xzm_R RACK1; ribosome, transl 100.0 3.5E-34 1.2E-38 253.9 29.9 244 79-336 70-342 (343)
34 3jrp_A Fusion protein of prote 100.0 4.9E-34 1.7E-38 255.7 30.3 247 79-335 5-288 (379)
35 4aez_A CDC20, WD repeat-contai 100.0 1.4E-33 4.9E-38 255.4 33.1 248 82-340 131-386 (401)
36 1gxr_A ESG1, transducin-like e 100.0 3.5E-33 1.2E-37 246.1 34.6 237 83-333 95-336 (337)
37 1nr0_A Actin interacting prote 100.0 5.6E-34 1.9E-38 271.7 30.8 242 83-337 16-273 (611)
38 4ggc_A P55CDC, cell division c 100.0 2E-33 6.9E-38 245.8 31.6 239 88-336 28-317 (318)
39 4gga_A P55CDC, cell division c 100.0 3.9E-33 1.3E-37 254.1 34.2 246 82-340 144-401 (420)
40 3zwl_B Eukaryotic translation 100.0 5.3E-33 1.8E-37 247.9 34.3 247 77-337 24-349 (369)
41 1k8k_C P40, ARP2/3 complex 41 100.0 2E-33 7E-38 251.2 29.5 242 80-334 3-274 (372)
42 1gxr_A ESG1, transducin-like e 100.0 8.4E-33 2.9E-37 243.6 32.9 245 81-338 47-300 (337)
43 4ery_A WD repeat-containing pr 100.0 1.3E-32 4.6E-37 240.4 32.8 241 79-333 59-311 (312)
44 4e54_B DNA damage-binding prot 100.0 2.8E-34 9.4E-39 262.9 23.0 247 81-338 115-434 (435)
45 4a11_B DNA excision repair pro 100.0 1.1E-32 3.8E-37 249.3 32.4 255 79-343 37-374 (408)
46 2ymu_A WD-40 repeat protein; u 100.0 7.7E-33 2.6E-37 262.1 32.6 236 79-332 297-537 (577)
47 3ei3_B DNA damage-binding prot 100.0 3E-32 1E-36 245.1 34.2 244 79-334 67-382 (383)
48 3dwl_C Actin-related protein 2 100.0 8.1E-35 2.8E-39 261.1 17.1 241 80-334 6-281 (377)
49 3dm0_A Maltose-binding peripla 100.0 8.6E-33 2.9E-37 267.5 31.0 247 80-338 377-636 (694)
50 3k26_A Polycomb protein EED; W 100.0 9E-34 3.1E-38 252.7 22.3 238 83-334 67-366 (366)
51 1sq9_A Antiviral protein SKI8; 100.0 6.1E-33 2.1E-37 250.5 28.0 245 79-336 56-397 (397)
52 2pm9_A Protein WEB1, protein t 100.0 3.1E-33 1.1E-37 253.9 25.4 248 82-340 64-343 (416)
53 3mmy_A MRNA export factor; mRN 100.0 2.3E-32 8E-37 243.6 28.1 249 78-336 32-348 (368)
54 3i2n_A WD repeat-containing pr 100.0 1.1E-32 3.7E-37 245.0 24.4 246 80-338 13-295 (357)
55 3dm0_A Maltose-binding peripla 100.0 5.4E-32 1.9E-36 261.9 31.3 242 79-333 424-692 (694)
56 1sq9_A Antiviral protein SKI8; 100.0 2.8E-32 9.5E-37 246.2 27.2 248 79-339 10-327 (397)
57 1r5m_A SIR4-interacting protei 100.0 1.1E-31 3.9E-36 243.8 30.0 238 83-336 106-363 (425)
58 3dw8_B Serine/threonine-protei 100.0 1.9E-32 6.5E-37 251.1 24.7 243 83-337 26-376 (447)
59 3mkq_A Coatomer beta'-subunit; 100.0 1.3E-31 4.3E-36 263.8 30.1 246 79-338 7-263 (814)
60 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-31 4.9E-36 239.2 27.7 247 79-337 46-364 (372)
61 3gre_A Serine/threonine-protei 100.0 3.3E-32 1.1E-36 249.1 24.0 249 80-340 58-365 (437)
62 1yfq_A Cell cycle arrest prote 100.0 4.4E-32 1.5E-36 239.8 23.7 247 80-340 6-288 (342)
63 3vl1_A 26S proteasome regulato 100.0 2E-32 6.7E-37 249.1 21.9 237 87-337 58-325 (420)
64 3k26_A Polycomb protein EED; W 100.0 1.3E-31 4.3E-36 238.8 26.6 247 79-338 12-322 (366)
65 3vl1_A 26S proteasome regulato 100.0 2.2E-31 7.5E-36 242.2 28.5 238 86-337 98-368 (420)
66 1r5m_A SIR4-interacting protei 100.0 1.1E-31 3.6E-36 244.1 26.1 239 79-333 143-424 (425)
67 3jro_A Fusion protein of prote 100.0 4.3E-32 1.5E-36 264.4 25.0 246 80-337 4-288 (753)
68 3i2n_A WD repeat-containing pr 100.0 1.2E-31 4E-36 238.3 25.0 241 82-337 62-356 (357)
69 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-30 3.7E-35 227.8 29.9 240 79-340 12-261 (313)
70 2xyi_A Probable histone-bindin 100.0 2.1E-31 7.3E-36 243.3 25.7 247 79-336 122-412 (430)
71 2j04_B YDR362CP, TAU91; beta p 100.0 2.8E-32 9.7E-37 253.3 20.0 242 83-335 131-429 (524)
72 2aq5_A Coronin-1A; WD40 repeat 100.0 3.5E-31 1.2E-35 239.7 26.5 246 79-336 75-344 (402)
73 3odt_A Protein DOA1; ubiquitin 100.0 3E-30 1E-34 225.0 31.0 241 79-340 53-302 (313)
74 3frx_A Guanine nucleotide-bind 100.0 9.2E-31 3.1E-35 229.6 26.7 206 121-338 10-231 (319)
75 3sfz_A APAF-1, apoptotic pepti 100.0 3.1E-30 1.1E-34 264.8 34.1 243 79-335 609-914 (1249)
76 2j04_B YDR362CP, TAU91; beta p 100.0 1.4E-31 4.6E-36 248.8 21.7 240 82-334 204-517 (524)
77 1pgu_A Actin interacting prote 100.0 9.9E-31 3.4E-35 249.2 27.9 240 83-338 16-287 (615)
78 2pm9_A Protein WEB1, protein t 100.0 3.1E-32 1.1E-36 247.3 16.0 249 77-335 105-415 (416)
79 3gre_A Serine/threonine-protei 100.0 3.7E-30 1.3E-34 235.5 29.4 241 83-331 109-437 (437)
80 3v7d_B Cell division control p 100.0 1.4E-29 4.9E-34 233.4 32.5 238 79-337 115-384 (464)
81 3v7d_B Cell division control p 100.0 4.7E-29 1.6E-33 229.9 34.0 239 80-339 157-426 (464)
82 3dwl_C Actin-related protein 2 100.0 6.4E-31 2.2E-35 235.7 20.1 241 80-332 50-377 (377)
83 4aez_A CDC20, WD repeat-contai 100.0 2.8E-29 9.7E-34 227.1 30.1 238 83-337 89-339 (401)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.4E-29 8.1E-34 231.1 29.5 237 86-332 5-337 (450)
85 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-29 4.7E-34 231.7 25.5 235 79-339 167-419 (435)
86 1p22_A F-BOX/WD-repeat protein 100.0 7.2E-29 2.4E-33 226.9 28.6 232 81-337 129-368 (435)
87 2w18_A PALB2, fancn, partner a 100.0 2.3E-28 8E-33 209.7 29.6 241 87-332 41-355 (356)
88 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-29 1.1E-33 226.9 25.7 240 88-337 37-302 (402)
89 2oaj_A Protein SNI1; WD40 repe 100.0 5.6E-29 1.9E-33 246.1 29.2 239 81-333 13-311 (902)
90 2pm7_B Protein transport prote 100.0 3.3E-29 1.1E-33 217.4 24.2 199 127-336 7-240 (297)
91 3sfz_A APAF-1, apoptotic pepti 100.0 9.8E-30 3.3E-34 261.2 23.3 246 83-344 959-1217(1249)
92 1yfq_A Cell cycle arrest prote 100.0 5.4E-29 1.8E-33 220.0 23.8 234 80-331 51-321 (342)
93 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.3E-28 3.2E-32 220.2 32.7 237 79-339 112-353 (445)
94 3lrv_A PRE-mRNA-splicing facto 100.0 8.6E-29 3E-33 219.2 24.4 228 92-337 43-295 (343)
95 3mkq_A Coatomer beta'-subunit; 100.0 2.2E-28 7.4E-33 240.7 29.7 243 79-336 49-304 (814)
96 4gq1_A NUP37; propeller, trans 100.0 6.5E-29 2.2E-33 224.1 23.9 239 82-333 86-388 (393)
97 1pgu_A Actin interacting prote 100.0 5.1E-28 1.8E-32 230.4 30.8 251 78-338 56-332 (615)
98 4gga_A P55CDC, cell division c 100.0 9.2E-28 3.1E-32 218.6 30.6 242 87-344 107-363 (420)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-27 1.1E-31 216.5 33.5 237 79-339 153-396 (445)
100 1l0q_A Surface layer protein; 100.0 5.8E-27 2E-31 211.0 34.4 238 85-338 31-279 (391)
101 3iz6_a 40S ribosomal protein R 100.0 4.9E-29 1.7E-33 223.9 20.3 206 121-337 59-283 (380)
102 3dw8_B Serine/threonine-protei 100.0 3.1E-28 1E-32 223.2 25.1 235 86-333 94-445 (447)
103 2j04_A TAU60, YPL007P, hypothe 100.0 4.9E-29 1.7E-33 227.2 19.2 228 83-333 13-296 (588)
104 3bg1_A Protein SEC13 homolog; 100.0 4.3E-29 1.5E-33 218.6 17.8 200 127-335 11-248 (316)
105 3bws_A Protein LP49; two-domai 100.0 8.2E-27 2.8E-31 212.9 32.5 239 81-334 165-432 (433)
106 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.1E-27 1.1E-31 217.0 29.5 240 82-335 99-392 (450)
107 4e54_B DNA damage-binding prot 100.0 2.5E-28 8.5E-33 223.3 20.8 202 127-337 117-330 (435)
108 3ei3_B DNA damage-binding prot 100.0 5E-27 1.7E-31 211.0 28.7 205 122-340 67-288 (383)
109 3zwl_B Eukaryotic translation 100.0 1.1E-26 3.8E-31 206.8 29.3 204 122-338 26-253 (369)
110 4h5i_A Guanine nucleotide-exch 100.0 3.9E-27 1.3E-31 210.3 25.7 194 83-290 131-343 (365)
111 4aow_A Guanine nucleotide-bind 100.0 1E-26 3.6E-31 205.0 27.6 219 108-338 18-250 (340)
112 3jrp_A Fusion protein of prote 100.0 2.8E-27 9.6E-32 211.7 23.6 199 127-336 9-242 (379)
113 3bws_A Protein LP49; two-domai 100.0 3.9E-26 1.3E-30 208.4 29.3 244 85-339 122-395 (433)
114 2xyi_A Probable histone-bindin 100.0 1.2E-26 4.1E-31 211.8 25.6 200 127-336 126-355 (430)
115 2oaj_A Protein SNI1; WD40 repe 100.0 3.7E-27 1.3E-31 233.0 22.3 248 81-340 431-789 (902)
116 3vu4_A KMHSV2; beta-propeller 99.9 1.3E-25 4.3E-30 199.8 26.5 232 87-338 60-340 (355)
117 4a11_B DNA excision repair pro 99.9 4.3E-26 1.5E-30 206.0 23.4 224 106-340 23-282 (408)
118 1l0q_A Surface layer protein; 99.9 5.6E-25 1.9E-29 198.0 30.4 223 99-338 4-237 (391)
119 2j04_A TAU60, YPL007P, hypothe 99.9 1.2E-25 3.9E-30 205.1 24.6 218 83-322 83-349 (588)
120 3jro_A Fusion protein of prote 99.9 7.5E-26 2.6E-30 220.4 23.9 199 127-336 7-240 (753)
121 4ggc_A P55CDC, cell division c 99.9 7.5E-25 2.6E-29 191.2 26.4 202 82-292 64-317 (318)
122 3f3f_A Nucleoporin SEH1; struc 99.9 6.3E-25 2.2E-29 193.6 25.1 200 127-337 9-252 (351)
123 3lrv_A PRE-mRNA-splicing facto 99.9 3.3E-25 1.1E-29 196.2 22.1 229 86-333 77-332 (343)
124 3mmy_A MRNA export factor; mRN 99.9 2E-24 6.7E-29 192.2 23.6 208 122-342 33-312 (368)
125 4gq1_A NUP37; propeller, trans 99.9 1.3E-24 4.4E-29 196.0 21.8 242 87-340 17-354 (393)
126 2w18_A PALB2, fancn, partner a 99.9 6.9E-24 2.4E-28 182.0 22.7 195 83-288 109-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.4E-22 4.6E-27 183.9 28.5 226 97-336 143-389 (415)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.8E-23 2E-27 186.4 22.5 245 86-337 63-347 (415)
129 1ri6_A Putative isomerase YBHE 99.9 1.2E-21 4.1E-26 172.6 26.8 238 83-333 35-307 (343)
130 1nir_A Nitrite reductase; hemo 99.9 1.7E-21 5.8E-26 182.2 28.9 248 84-339 220-519 (543)
131 3u4y_A Uncharacterized protein 99.9 3.6E-21 1.2E-25 169.1 28.3 242 84-336 39-306 (331)
132 1pby_B Quinohemoprotein amine 99.9 1.5E-21 5.2E-26 171.5 25.0 239 87-339 35-315 (337)
133 2ojh_A Uncharacterized protein 99.9 7.7E-22 2.6E-26 169.8 22.6 239 80-325 36-293 (297)
134 2ecf_A Dipeptidyl peptidase IV 99.9 3.1E-22 1.1E-26 195.0 21.9 239 85-333 36-366 (741)
135 3vgz_A Uncharacterized protein 99.9 8.1E-21 2.8E-25 168.2 29.1 238 84-338 39-307 (353)
136 3hfq_A Uncharacterized protein 99.9 6.2E-21 2.1E-25 168.8 27.2 239 84-333 38-316 (347)
137 1nir_A Nitrite reductase; hemo 99.9 8.8E-21 3E-25 177.4 28.4 230 92-334 144-402 (543)
138 3o4h_A Acylamino-acid-releasin 99.9 3.3E-21 1.1E-25 182.6 22.2 233 85-332 21-274 (582)
139 3u4y_A Uncharacterized protein 99.9 1E-19 3.6E-24 159.7 29.1 230 92-337 4-255 (331)
140 1jmx_B Amine dehydrogenase; ox 99.9 5E-20 1.7E-24 162.7 24.4 229 90-338 4-329 (349)
141 2ojh_A Uncharacterized protein 99.9 3.2E-20 1.1E-24 159.7 21.4 216 105-337 21-261 (297)
142 3scy_A Hypothetical bacterial 99.9 4.5E-19 1.5E-23 157.7 28.5 237 84-333 48-336 (361)
143 2z3z_A Dipeptidyl aminopeptida 99.9 5.3E-20 1.8E-24 178.3 23.3 244 82-336 117-437 (706)
144 2ecf_A Dipeptidyl peptidase IV 99.9 3.7E-20 1.3E-24 180.4 22.2 234 87-334 110-413 (741)
145 3vgz_A Uncharacterized protein 99.9 1.1E-18 3.9E-23 154.3 29.9 226 86-324 89-334 (353)
146 1xfd_A DIP, dipeptidyl aminope 99.9 4.2E-21 1.4E-25 186.5 15.2 239 87-331 18-341 (723)
147 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.1E-19 7E-24 160.3 23.8 240 86-335 40-342 (365)
148 2z3z_A Dipeptidyl aminopeptida 99.8 8.6E-20 3E-24 176.8 22.2 235 88-333 28-341 (706)
149 1k32_A Tricorn protease; prote 99.8 9.9E-20 3.4E-24 183.6 23.0 236 82-336 200-463 (1045)
150 1xfd_A DIP, dipeptidyl aminope 99.8 1.2E-19 4.1E-24 176.2 21.2 240 87-336 62-395 (723)
151 2oit_A Nucleoporin 214KDA; NH2 99.8 4.9E-19 1.7E-23 161.2 23.4 239 86-332 37-331 (434)
152 1q7f_A NHL, brain tumor CG1071 99.8 4.2E-17 1.4E-21 140.1 31.9 238 83-336 27-282 (286)
153 1ri6_A Putative isomerase YBHE 99.8 4.5E-18 1.5E-22 149.6 25.9 226 98-334 5-262 (343)
154 1pby_B Quinohemoprotein amine 99.8 7.6E-19 2.6E-23 154.2 20.9 224 98-338 2-273 (337)
155 1k32_A Tricorn protease; prote 99.8 1.1E-18 3.9E-23 175.9 23.9 241 84-337 294-603 (1045)
156 3o4h_A Acylamino-acid-releasin 99.8 1.3E-18 4.4E-23 164.8 22.5 226 84-333 63-314 (582)
157 1z68_A Fibroblast activation p 99.8 7.5E-20 2.5E-24 177.6 12.2 237 90-336 20-348 (719)
158 2oit_A Nucleoporin 214KDA; NH2 99.8 8.7E-19 3E-23 159.6 18.1 195 132-336 39-280 (434)
159 4a5s_A Dipeptidyl peptidase 4 99.8 7.8E-19 2.7E-23 170.9 16.1 247 86-337 17-356 (740)
160 3fvz_A Peptidyl-glycine alpha- 99.8 1.5E-16 5.2E-21 139.6 27.5 240 85-336 23-324 (329)
161 3hfq_A Uncharacterized protein 99.8 1.2E-16 4E-21 141.2 26.9 220 105-334 15-271 (347)
162 3pe7_A Oligogalacturonate lyas 99.8 1.1E-17 3.8E-22 150.0 20.6 246 82-337 27-332 (388)
163 3pe7_A Oligogalacturonate lyas 99.8 8.8E-17 3E-21 144.2 23.8 244 81-335 76-383 (388)
164 1jmx_B Amine dehydrogenase; ox 99.7 1.7E-16 5.7E-21 140.0 20.6 205 87-299 44-334 (349)
165 3c5m_A Oligogalacturonate lyas 99.7 8.2E-17 2.8E-21 144.6 15.7 234 87-337 37-332 (396)
166 3scy_A Hypothetical bacterial 99.7 2.2E-15 7.6E-20 133.8 24.7 231 96-333 12-290 (361)
167 2xdw_A Prolyl endopeptidase; a 99.7 1.5E-15 5.1E-20 147.1 25.1 247 83-336 122-416 (710)
168 1z68_A Fibroblast activation p 99.7 9.9E-17 3.4E-21 155.7 15.9 233 87-334 61-391 (719)
169 1jof_A Carboxy-CIS,CIS-muconat 99.7 5.5E-15 1.9E-19 131.6 25.1 226 99-333 4-290 (365)
170 3azo_A Aminopeptidase; POP fam 99.7 1E-15 3.6E-20 147.1 21.1 243 78-333 16-322 (662)
171 3e5z_A Putative gluconolactona 99.7 4.6E-14 1.6E-18 121.7 29.4 231 83-336 25-288 (296)
172 2oiz_A Aromatic amine dehydrog 99.7 2.3E-15 7.9E-20 133.7 20.1 233 90-338 54-340 (361)
173 2gop_A Trilobed protease; beta 99.7 1.6E-14 5.5E-19 127.4 24.0 224 86-335 15-292 (347)
174 2gop_A Trilobed protease; beta 99.7 2.2E-14 7.6E-19 126.5 24.7 227 86-333 59-330 (347)
175 3c5m_A Oligogalacturonate lyas 99.7 3.8E-14 1.3E-18 127.1 26.2 229 90-333 85-381 (396)
176 1rwi_B Serine/threonine-protei 99.7 2.4E-14 8.1E-19 121.6 23.2 236 87-338 25-268 (270)
177 4a5s_A Dipeptidyl peptidase 4 99.7 5.3E-15 1.8E-19 143.9 21.3 192 132-336 19-296 (740)
178 3azo_A Aminopeptidase; POP fam 99.7 1.4E-14 4.7E-19 139.2 24.0 236 90-336 81-371 (662)
179 2dg1_A DRP35, lactonase; beta 99.7 4.8E-13 1.6E-17 117.3 30.8 242 83-334 42-314 (333)
180 2bkl_A Prolyl endopeptidase; m 99.6 7.3E-15 2.5E-19 141.9 18.2 245 83-336 118-399 (695)
181 3dsm_A Uncharacterized protein 99.6 3.3E-13 1.1E-17 118.1 27.0 235 87-338 45-305 (328)
182 3no2_A Uncharacterized protein 99.6 4.4E-13 1.5E-17 114.2 26.1 211 96-322 4-231 (276)
183 3dsm_A Uncharacterized protein 99.6 1.1E-12 3.6E-17 114.9 27.4 217 105-337 16-256 (328)
184 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 3.4E-12 1.2E-16 110.7 30.0 235 86-335 18-300 (314)
185 2dg1_A DRP35, lactonase; beta 99.6 2.2E-13 7.5E-18 119.4 22.0 235 86-333 6-262 (333)
186 3no2_A Uncharacterized protein 99.6 3.3E-13 1.1E-17 115.0 22.3 184 141-337 5-198 (276)
187 3fvz_A Peptidyl-glycine alpha- 99.6 2.9E-13 1E-17 118.6 22.6 206 130-338 24-281 (329)
188 1yr2_A Prolyl oligopeptidase; 99.6 1.2E-13 4E-18 134.5 21.3 245 83-336 160-443 (741)
189 2z2n_A Virginiamycin B lyase; 99.6 1.8E-11 6.3E-16 105.1 32.2 232 84-332 13-253 (299)
190 3g4e_A Regucalcin; six bladed 99.6 6.5E-12 2.2E-16 108.3 29.1 220 85-322 12-260 (297)
191 1qks_A Cytochrome CD1 nitrite 99.6 4.3E-12 1.5E-16 118.6 29.5 242 87-339 198-543 (567)
192 1q7f_A NHL, brain tumor CG1071 99.6 2.4E-12 8.3E-17 110.2 25.2 194 128-333 28-237 (286)
193 3hrp_A Uncharacterized protein 99.6 4.7E-12 1.6E-16 114.1 28.1 236 85-333 130-409 (409)
194 1qks_A Cytochrome CD1 nitrite 99.6 6.5E-12 2.2E-16 117.4 29.3 227 95-335 165-422 (567)
195 2xdw_A Prolyl endopeptidase; a 99.5 2.4E-12 8.2E-17 124.6 26.8 240 95-336 81-370 (710)
196 2bkl_A Prolyl endopeptidase; m 99.5 1.2E-12 4E-17 126.5 23.5 231 95-333 77-348 (695)
197 2mad_H Methylamine dehydrogena 99.5 2.1E-11 7E-16 108.4 29.4 236 90-340 70-356 (373)
198 2z2n_A Virginiamycin B lyase; 99.5 1.3E-10 4.3E-15 99.8 32.4 233 85-335 56-296 (299)
199 3iuj_A Prolyl endopeptidase; h 99.5 4.6E-12 1.6E-16 122.2 22.9 245 82-336 125-407 (693)
200 2ghs_A AGR_C_1268P; regucalcin 99.5 2.2E-10 7.4E-15 100.1 30.1 216 87-323 50-291 (326)
201 2oiz_A Aromatic amine dehydrog 99.5 1.5E-11 5E-16 109.1 22.7 215 86-316 108-360 (361)
202 2qc5_A Streptogramin B lactona 99.5 6E-10 2.1E-14 95.6 31.8 231 85-332 19-258 (300)
203 3e5z_A Putative gluconolactona 99.4 3.7E-11 1.3E-15 103.4 22.4 192 128-333 26-245 (296)
204 3c75_H MADH, methylamine dehyd 99.4 2.8E-11 9.6E-16 108.4 21.7 231 96-340 83-408 (426)
205 3sjl_D Methylamine dehydrogena 99.4 7.5E-11 2.6E-15 103.9 22.9 234 90-339 82-368 (386)
206 3dr2_A Exported gluconolactona 99.4 2.1E-10 7.3E-15 99.1 25.5 227 84-331 43-303 (305)
207 1xip_A Nucleoporin NUP159; bet 99.4 6E-12 2.1E-16 111.2 15.5 169 87-275 39-230 (388)
208 1yr2_A Prolyl oligopeptidase; 99.4 8.7E-11 3E-15 114.2 24.5 235 94-333 115-392 (741)
209 2qe8_A Uncharacterized protein 99.4 4.3E-10 1.5E-14 98.9 26.2 231 86-328 17-315 (343)
210 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6.2E-14 92.6 29.3 231 85-333 61-299 (300)
211 2ece_A 462AA long hypothetical 99.4 1.7E-09 6E-14 96.0 28.9 228 95-322 93-399 (462)
212 3g4e_A Regucalcin; six bladed 99.4 1.2E-09 4E-14 94.1 27.1 198 132-338 15-233 (297)
213 1xip_A Nucleoporin NUP159; bet 99.4 2E-11 7E-16 107.8 15.8 171 131-321 39-231 (388)
214 1rwi_B Serine/threonine-protei 99.3 2.2E-10 7.5E-15 96.9 19.0 194 131-336 25-224 (270)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 1.2E-09 4.2E-14 94.4 21.7 193 132-337 20-259 (314)
216 2ghs_A AGR_C_1268P; regucalcin 99.2 1.1E-08 3.8E-13 89.2 26.9 189 134-332 53-258 (326)
217 2iwa_A Glutamine cyclotransfer 99.2 3.1E-08 1.1E-12 82.6 28.0 205 122-336 13-239 (266)
218 3hrp_A Uncharacterized protein 99.2 3.6E-09 1.2E-13 95.2 22.9 194 131-336 132-356 (409)
219 1npe_A Nidogen, entactin; glyc 99.2 1.1E-07 3.8E-12 80.2 30.5 231 97-338 1-242 (267)
220 2mad_H Methylamine dehydrogena 99.2 4.6E-08 1.6E-12 86.8 27.6 232 95-339 30-312 (373)
221 1mda_H Methylamine dehydrogena 99.2 1.7E-09 5.8E-14 95.3 17.2 228 90-340 69-352 (368)
222 3iuj_A Prolyl endopeptidase; h 99.1 5.1E-09 1.8E-13 100.9 21.4 196 128-335 127-360 (693)
223 3nol_A Glutamine cyclotransfer 99.1 6.5E-08 2.2E-12 79.8 24.0 190 122-323 35-244 (262)
224 1fwx_A Nitrous oxide reductase 99.1 5E-09 1.7E-13 96.3 18.2 235 95-336 99-433 (595)
225 1kb0_A Quinohemoprotein alcoho 99.1 4.6E-08 1.6E-12 93.7 25.7 237 97-339 128-512 (677)
226 1yiq_A Quinohemoprotein alcoho 99.1 3.2E-08 1.1E-12 95.0 24.0 236 97-338 121-509 (689)
227 3hxj_A Pyrrolo-quinoline quino 99.1 2E-08 7E-13 87.3 20.2 218 97-337 107-327 (330)
228 3mbr_X Glutamine cyclotransfer 99.1 4.5E-07 1.5E-11 74.2 26.4 199 122-333 13-232 (243)
229 1npe_A Nidogen, entactin; glyc 99.0 1E-06 3.5E-11 74.2 29.5 215 87-316 37-263 (267)
230 3sjl_D Methylamine dehydrogena 99.0 3.9E-08 1.3E-12 86.6 20.9 228 94-339 41-325 (386)
231 2iwa_A Glutamine cyclotransfer 99.0 3.5E-07 1.2E-11 76.3 24.6 191 87-291 22-238 (266)
232 3nok_A Glutaminyl cyclase; bet 99.0 3.9E-07 1.3E-11 75.2 23.9 186 122-322 47-253 (268)
233 2fp8_A Strictosidine synthase; 99.0 8.6E-07 2.9E-11 77.0 27.1 236 88-336 21-315 (322)
234 2qe8_A Uncharacterized protein 99.0 3.4E-08 1.2E-12 86.8 17.9 200 130-335 17-279 (343)
235 2hz6_A Endoplasmic reticulum t 98.9 1.8E-10 6.1E-15 102.4 2.3 168 156-337 19-195 (369)
236 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.6E-06 5.4E-11 77.0 27.8 223 97-338 53-300 (376)
237 2hz6_A Endoplasmic reticulum t 98.9 5.4E-10 1.8E-14 99.3 5.1 183 96-298 8-200 (369)
238 3dr2_A Exported gluconolactona 98.9 1.6E-07 5.4E-12 81.0 19.4 196 82-287 82-303 (305)
239 2ece_A 462AA long hypothetical 98.9 1.5E-06 5.2E-11 77.3 25.2 190 140-335 95-353 (462)
240 3nol_A Glutamine cyclotransfer 98.9 4.1E-06 1.4E-10 69.1 25.0 184 88-288 45-252 (262)
241 3q7m_A Lipoprotein YFGL, BAMB; 98.8 3.3E-06 1.1E-10 74.9 26.3 218 97-338 103-341 (376)
242 1fwx_A Nitrous oxide reductase 98.8 2E-06 6.9E-11 79.2 24.8 173 156-334 112-361 (595)
243 3c75_H MADH, methylamine dehyd 98.8 1.2E-06 4.1E-11 78.5 22.8 201 90-297 122-409 (426)
244 4a2l_A BT_4663, two-component 98.8 7.1E-06 2.4E-10 80.4 30.5 235 88-336 175-438 (795)
245 3v64_C Agrin; beta propeller, 98.8 4.6E-05 1.6E-09 66.8 31.5 239 85-338 33-279 (349)
246 2p4o_A Hypothetical protein; p 98.8 1.7E-05 5.8E-10 68.2 28.2 221 86-324 32-278 (306)
247 3hxj_A Pyrrolo-quinoline quino 98.8 2E-07 6.7E-12 81.0 16.1 219 87-332 61-282 (330)
248 2ad6_A Methanol dehydrogenase 98.8 1.7E-06 5.7E-11 81.2 22.9 232 97-339 115-499 (571)
249 3mbr_X Glutamine cyclotransfer 98.8 2.3E-05 7.7E-10 64.1 26.4 185 87-288 22-231 (243)
250 1kb0_A Quinohemoprotein alcoho 98.8 2.6E-06 8.8E-11 81.7 24.2 179 157-338 284-571 (677)
251 1ijq_A LDL receptor, low-densi 98.8 7.4E-05 2.5E-09 64.5 32.6 227 99-338 3-242 (316)
252 3nok_A Glutaminyl cyclase; bet 98.7 7.5E-06 2.6E-10 67.5 23.0 178 87-280 56-256 (268)
253 1kv9_A Type II quinohemoprotei 98.7 1.6E-06 5.4E-11 83.0 22.0 237 97-338 117-492 (668)
254 3v65_B Low-density lipoprotein 98.7 3.4E-05 1.2E-09 68.7 29.2 237 87-338 78-322 (386)
255 3p5b_L Low density lipoprotein 98.7 0.00013 4.3E-09 65.3 32.5 229 98-338 84-324 (400)
256 1yiq_A Quinohemoprotein alcoho 98.7 4.7E-06 1.6E-10 80.0 23.7 190 97-297 70-345 (689)
257 3sov_A LRP-6, low-density lipo 98.7 7E-05 2.4E-09 64.6 28.9 228 99-338 6-242 (318)
258 4a2l_A BT_4663, two-component 98.6 6.5E-05 2.2E-09 73.5 29.9 236 85-336 262-528 (795)
259 1w6s_A Methanol dehydrogenase 98.6 3E-05 1E-09 72.8 25.5 228 100-338 124-507 (599)
260 3qqz_A Putative uncharacterize 98.6 0.00022 7.4E-09 59.1 27.1 196 127-331 24-250 (255)
261 3m0c_C LDL receptor, low-densi 98.5 0.00041 1.4E-08 67.2 32.4 229 98-338 396-636 (791)
262 2xzh_A Clathrin heavy chain 1; 98.5 0.00029 9.9E-09 59.6 29.4 228 92-335 73-333 (365)
263 1ijq_A LDL receptor, low-densi 98.5 0.00019 6.4E-09 61.9 26.9 174 156-334 10-195 (316)
264 2xzh_A Clathrin heavy chain 1; 98.5 0.00037 1.3E-08 59.0 28.2 219 107-338 50-294 (365)
265 3v65_B Low-density lipoprotein 98.5 0.00016 5.3E-09 64.4 26.0 174 156-334 96-277 (386)
266 4a0p_A LRP6, LRP-6, low-densit 98.5 0.0011 3.9E-08 62.6 32.6 229 98-338 7-241 (628)
267 3v64_C Agrin; beta propeller, 98.5 0.00033 1.1E-08 61.3 26.9 174 156-334 53-234 (349)
268 2xe4_A Oligopeptidase B; hydro 98.4 2.2E-05 7.6E-10 76.2 20.9 242 87-336 175-460 (751)
269 3v9f_A Two-component system se 98.4 0.00028 9.6E-09 68.9 28.3 236 85-336 210-480 (781)
270 3v9f_A Two-component system se 98.4 0.00022 7.5E-09 69.6 27.5 237 85-335 257-525 (781)
271 3p5b_L Low density lipoprotein 98.4 0.001 3.5E-08 59.3 31.8 205 84-299 110-329 (400)
272 1bpo_A Protein (clathrin); cla 98.4 0.00091 3.1E-08 58.9 27.2 219 107-338 49-293 (494)
273 1bpo_A Protein (clathrin); cla 98.4 0.00099 3.4E-08 58.7 29.6 230 91-336 71-333 (494)
274 1mda_H Methylamine dehydrogena 98.4 5.5E-06 1.9E-10 72.9 13.6 163 157-335 47-241 (368)
275 4hw6_A Hypothetical protein, I 98.4 0.00031 1.1E-08 63.4 25.3 237 87-333 140-432 (433)
276 3qqz_A Putative uncharacterize 98.4 0.00071 2.4E-08 55.9 26.4 192 85-288 26-251 (255)
277 2fp8_A Strictosidine synthase; 98.4 9.8E-05 3.3E-09 63.8 20.9 200 87-290 81-313 (322)
278 3tc9_A Hypothetical hydrolase; 98.3 0.00063 2.2E-08 61.3 26.4 236 87-333 138-429 (430)
279 3sov_A LRP-6, low-density lipo 98.3 0.0011 3.9E-08 57.0 26.7 200 87-299 36-247 (318)
280 1flg_A Protein (quinoprotein e 98.3 0.00024 8.3E-09 66.7 24.1 57 279-339 465-521 (582)
281 2ad6_A Methanol dehydrogenase 98.3 0.00026 9E-09 66.3 24.1 194 96-299 62-344 (571)
282 1kv9_A Type II quinohemoprotei 98.3 0.00031 1E-08 67.2 24.9 177 157-336 271-554 (668)
283 3amr_A 3-phytase; beta-propell 98.3 0.00038 1.3E-08 59.9 22.7 172 156-333 50-262 (355)
284 3kya_A Putative phosphatase; s 98.3 0.0011 3.9E-08 60.2 26.3 251 87-342 140-483 (496)
285 1k3i_A Galactose oxidase precu 98.2 4.7E-05 1.6E-09 72.8 17.7 238 90-336 190-499 (656)
286 2p4o_A Hypothetical protein; p 98.2 0.0005 1.7E-08 58.9 22.2 188 131-333 33-241 (306)
287 2xe4_A Oligopeptidase B; hydro 98.2 8.4E-05 2.9E-09 72.2 18.6 197 131-331 175-395 (751)
288 1k3i_A Galactose oxidase precu 98.2 0.00037 1.3E-08 66.6 22.7 229 88-323 245-530 (656)
289 1w6s_A Methanol dehydrogenase 98.2 0.0011 3.9E-08 62.1 24.5 140 156-298 131-350 (599)
290 3m0c_C LDL receptor, low-densi 98.1 0.0076 2.6E-07 58.5 29.6 203 85-298 423-640 (791)
291 3tc9_A Hypothetical hydrolase; 98.0 0.00072 2.4E-08 61.0 19.8 154 177-334 138-301 (430)
292 1n7d_A LDL receptor, low-densi 98.0 2.2E-05 7.6E-10 75.4 10.2 226 99-337 379-617 (699)
293 1flg_A Protein (quinoprotein e 98.0 0.0045 1.5E-07 58.0 25.4 194 96-299 68-364 (582)
294 3s94_A LRP-6, low-density lipo 98.0 0.004 1.4E-07 58.8 25.1 229 98-338 10-247 (619)
295 4hw6_A Hypothetical protein, I 98.0 0.0005 1.7E-08 62.0 18.1 152 177-333 140-303 (433)
296 4a0p_A LRP6, LRP-6, low-densit 98.0 0.014 4.6E-07 55.3 28.1 199 86-297 37-244 (628)
297 1n7d_A LDL receptor, low-densi 97.9 7.7E-05 2.6E-09 71.6 11.7 200 86-299 406-623 (699)
298 2p9w_A MAL S 1 allergenic prot 97.9 0.0063 2.2E-07 51.9 22.0 188 134-331 17-262 (334)
299 2ism_A Putative oxidoreductase 97.6 0.026 9E-07 49.2 26.0 227 86-322 31-333 (352)
300 3s94_A LRP-6, low-density lipo 97.6 0.044 1.5E-06 51.7 29.3 224 99-335 319-552 (619)
301 3amr_A 3-phytase; beta-propell 97.6 0.027 9.3E-07 48.5 24.0 188 97-299 40-273 (355)
302 3pbp_A Nucleoporin NUP82; beta 97.6 0.0091 3.1E-07 52.6 18.2 133 192-330 39-208 (452)
303 3ott_A Two-component system se 97.5 0.082 2.8E-06 51.3 26.9 228 85-335 21-261 (758)
304 3kya_A Putative phosphatase; s 97.5 0.0067 2.3E-07 55.2 17.2 156 177-334 140-341 (496)
305 1xi4_A Clathrin heavy chain; a 97.5 0.0049 1.7E-07 62.3 17.2 231 92-338 72-335 (1630)
306 2xbg_A YCF48-like protein; pho 97.5 0.045 1.5E-06 47.1 28.9 229 85-331 79-319 (327)
307 3sre_A PON1, serum paraoxonase 97.4 0.048 1.7E-06 47.4 24.1 203 87-298 51-308 (355)
308 1xi4_A Clathrin heavy chain; a 97.4 0.0048 1.6E-07 62.5 16.2 220 107-339 49-294 (1630)
309 3sre_A PON1, serum paraoxonase 97.4 0.056 1.9E-06 47.0 22.2 184 133-324 53-287 (355)
310 2p9w_A MAL S 1 allergenic prot 97.3 0.026 8.9E-07 48.2 17.7 156 177-335 14-216 (334)
311 3pbp_A Nucleoporin NUP82; beta 97.3 0.01 3.5E-07 52.3 15.2 114 220-339 26-163 (452)
312 2xbg_A YCF48-like protein; pho 97.3 0.074 2.5E-06 45.7 30.5 231 86-335 36-279 (327)
313 3a9g_A Putative uncharacterize 97.2 0.099 3.4E-06 45.5 28.0 230 86-322 29-330 (354)
314 2xn4_A Kelch-like protein 2; s 97.1 0.096 3.3E-06 44.3 21.9 230 97-337 16-279 (302)
315 2vpj_A Kelch-like protein 12; 97.1 0.097 3.3E-06 44.2 23.0 228 96-336 14-280 (301)
316 3ei3_A DNA damage-binding prot 96.8 0.54 1.8E-05 47.8 28.2 169 154-331 862-1059(1158)
317 3das_A Putative oxidoreductase 96.6 0.27 9.1E-06 42.5 18.3 159 174-336 30-235 (347)
318 2uvk_A YJHT; unknown function, 96.5 0.34 1.2E-05 41.9 20.2 74 96-170 19-100 (357)
319 3a9g_A Putative uncharacterize 96.5 0.26 8.8E-06 42.9 18.0 142 175-321 28-215 (354)
320 2g8s_A Glucose/sorbosone dehyd 96.5 0.36 1.2E-05 41.9 25.4 241 86-333 18-351 (353)
321 1zgk_A Kelch-like ECH-associat 96.5 0.34 1.1E-05 41.0 22.7 229 95-336 23-289 (308)
322 3s25_A Hypothetical 7-bladed b 96.3 0.4 1.4E-05 40.6 18.6 175 136-335 22-217 (302)
323 3das_A Putative oxidoreductase 96.3 0.48 1.6E-05 41.0 29.1 229 82-322 28-326 (347)
324 3ii7_A Kelch-like protein 7; p 96.3 0.42 1.4E-05 40.3 24.5 227 97-336 12-274 (306)
325 2be1_A Serine/threonine-protei 96.3 0.056 1.9E-06 46.6 12.0 107 99-212 12-139 (339)
326 3ei3_A DNA damage-binding prot 96.2 1.2 4.2E-05 45.2 27.9 171 156-334 807-999 (1158)
327 2ism_A Putative oxidoreductase 96.2 0.54 1.8E-05 40.8 21.9 190 131-336 32-299 (352)
328 3ott_A Two-component system se 95.9 1.3 4.5E-05 42.7 30.6 222 85-330 62-303 (758)
329 4asc_A Kelch repeat and BTB do 95.8 0.71 2.4E-05 39.1 22.3 228 100-336 8-279 (315)
330 1cru_A Protein (soluble quinop 95.7 1.1 3.7E-05 40.4 25.8 106 86-191 27-159 (454)
331 2g8s_A Glucose/sorbosone dehyd 95.5 0.48 1.6E-05 41.2 14.9 140 176-320 18-214 (353)
332 1tl2_A L10, protein (tachylect 95.5 0.38 1.3E-05 38.4 12.5 149 176-336 41-210 (236)
333 3sbq_A Nitrous-oxide reductase 95.2 0.55 1.9E-05 43.0 14.2 98 87-191 324-450 (638)
334 1cru_A Protein (soluble quinop 95.2 1.7 5.8E-05 39.1 22.1 103 175-277 26-162 (454)
335 3sbq_A Nitrous-oxide reductase 93.8 4.1 0.00014 37.5 21.7 218 95-322 140-453 (638)
336 1zgk_A Kelch-like ECH-associat 92.9 3.7 0.00013 34.4 19.7 172 156-336 39-242 (308)
337 1tl2_A L10, protein (tachylect 92.8 0.44 1.5E-05 38.1 7.6 104 215-328 41-157 (236)
338 2be1_A Serine/threonine-protei 92.7 0.51 1.7E-05 40.6 8.7 113 186-300 10-140 (339)
339 2vpj_A Kelch-like protein 12; 92.1 4.5 0.00016 33.6 22.2 187 96-292 62-280 (301)
340 2woz_A Kelch repeat and BTB do 91.3 5.9 0.0002 33.3 22.3 228 99-336 18-289 (318)
341 3q6k_A 43.2 kDa salivary prote 91.0 7.5 0.00025 33.9 23.2 163 156-321 123-341 (381)
342 4asc_A Kelch repeat and BTB do 90.5 7.1 0.00024 32.8 19.7 68 137-205 96-176 (315)
343 3ii7_A Kelch-like protein 7; p 90.2 7.3 0.00025 32.5 23.2 188 96-292 55-274 (306)
344 2zwa_A Leucine carboxyl methyl 90.2 13 0.00045 35.4 22.1 196 95-294 396-639 (695)
345 2xn4_A Kelch-like protein 2; s 89.9 7.6 0.00026 32.2 20.2 188 96-293 61-279 (302)
346 3s25_A Hypothetical 7-bladed b 89.7 8.3 0.00028 32.4 26.5 208 91-331 58-290 (302)
347 2wg3_C Hedgehog-interacting pr 88.8 13 0.00044 33.4 15.8 106 216-325 15-160 (463)
348 2uvk_A YJHT; unknown function, 87.5 13 0.00043 31.8 17.1 22 139-165 19-40 (357)
349 4gq2_M Nucleoporin NUP120; bet 85.9 7.7 0.00026 38.6 12.1 38 260-298 237-274 (950)
350 3qhy_B Beta-lactamase inhibito 85.1 15 0.00052 30.4 15.9 222 87-337 25-249 (282)
351 4gq2_M Nucleoporin NUP120; bet 82.3 8.9 0.0003 38.1 10.8 33 304-336 236-268 (950)
352 2zwa_A Leucine carboxyl methyl 80.4 41 0.0014 32.0 21.7 194 138-337 396-638 (695)
353 3f7f_A Nucleoporin NUP120; nuc 79.7 12 0.00041 35.6 10.0 73 259-336 222-307 (729)
354 3q6k_A 43.2 kDa salivary prote 79.6 31 0.001 30.1 21.8 137 195-334 124-306 (381)
355 2woz_A Kelch repeat and BTB do 77.9 29 0.001 28.9 19.9 68 138-206 108-187 (318)
356 3zwu_A Alkaline phosphatase PH 75.6 13 0.00045 34.5 9.1 59 261-321 478-548 (592)
357 4a9v_A PHOX; hydrolase, beta-p 73.1 22 0.00075 32.8 9.6 60 260-321 477-548 (592)
358 3qhy_B Beta-lactamase inhibito 72.6 39 0.0013 27.8 14.3 185 131-338 25-211 (282)
359 4fhn_B Nucleoporin NUP120; pro 72.1 7.8 0.00027 39.4 7.3 32 305-336 239-270 (1139)
360 4gz8_A Semaphorin-3A; multi-do 71.5 37 0.0013 32.1 11.1 69 261-329 414-495 (667)
361 1q47_A Semaphorin 3A; beta pro 66.9 27 0.00093 31.6 8.9 70 260-329 405-487 (495)
362 3b7f_A Glycosyl hydrolase, BNR 65.9 65 0.0022 27.8 25.4 59 260-321 233-296 (394)
363 4hvt_A Ritya.17583.B, post-pro 65.3 97 0.0033 29.6 22.4 236 89-333 132-429 (711)
364 4fhn_B Nucleoporin NUP120; pro 63.9 5.5 0.00019 40.6 4.2 37 261-298 240-276 (1139)
365 4a9v_A PHOX; hydrolase, beta-p 63.8 27 0.00092 32.3 8.2 57 177-233 477-549 (592)
366 3zwu_A Alkaline phosphatase PH 52.0 40 0.0014 31.3 7.5 56 178-233 478-549 (592)
367 3al9_A Plexin-A2; beta-propell 50.6 41 0.0014 30.8 7.3 69 260-329 401-476 (539)
368 3f7f_A Nucleoporin NUP120; nuc 50.4 61 0.0021 30.9 8.4 37 86-124 222-259 (729)
369 2wg3_C Hedgehog-interacting pr 44.2 1.7E+02 0.006 26.0 28.3 105 87-191 15-154 (463)
370 3nvq_A Semaphorin-7A; beta-pro 40.4 91 0.0031 28.9 7.8 58 272-329 382-444 (590)
371 1olz_A Semaphorin 4D; developm 37.2 1.4E+02 0.0047 28.3 8.7 69 261-329 399-477 (663)
372 1q47_A Semaphorin 3A; beta pro 32.2 1.4E+02 0.0049 26.9 7.7 67 217-285 406-487 (495)
373 3ol2_B Plexin-B1; beta-propell 27.5 2.3E+02 0.0078 25.9 8.2 68 261-329 389-461 (528)
374 3no0_A DNA gyrase subunit A; D 27.4 2.5E+02 0.0086 22.8 13.6 73 258-334 67-146 (276)
375 3oky_B Putative uncharacterize 27.1 2.9E+02 0.0099 25.4 8.7 70 260-329 404-495 (565)
376 3al9_A Plexin-A2; beta-propell 26.7 1.5E+02 0.0051 27.1 6.9 68 216-285 401-476 (539)
377 3oky_A Plexin-A2; transmembran 25.1 1.2E+02 0.0042 28.7 6.1 58 271-329 413-475 (681)
378 3elq_A Arylsulfate sulfotransf 24.5 4.2E+02 0.014 24.4 10.8 26 305-331 356-382 (571)
379 4gz8_A Semaphorin-3A; multi-do 22.8 3.1E+02 0.011 25.9 8.3 60 224-285 425-495 (667)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=8.9e-39 Score=278.70 Aligned_cols=250 Identities=13% Similarity=0.154 Sum_probs=215.3
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|.+.|++++|+|+|++|++|+ |+.|+|||+++.... ..+. .+...+.++.|.+++..+++++.| +.
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~s~s~d-----~~ 78 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEV--RSIQ-VTETPVRAGKFIARKNWIIVGSDD-----FR 78 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEEGGGTEEEEEETT-----SE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcee--EEee-ccCCcEEEEEEeCCCCEEEEECCC-----CE
Confidence 34568999999999999999999999 888999999876554 4454 677889999999999999999988 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCC-eEEEEEeccCCCeeEEEEecCCCeEEEE
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 232 (368)
|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||++++ .....+.+|...|.+++|+|++.. .++
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-~l~ 157 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFA 157 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT-EEE
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC-EEE
Confidence 9999999999999998 999999999999999888 5999999999877 556778899999999999995433 234
Q ss_pred eecCCCCeEEEEecCcc-eeeee-eccCcceEEEEECC--CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 233 CPGLQKGQVRVEHYASK-RTKFI-MAHDSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~~~-~~~~~-~~~~~~i~~v~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
+|+.|+.|++|+.... ....+ ..|...+..+.|+| ++.+|++|+.|+. |+|||+++++++..+.+ |...|.+
T Consensus 158 -sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~--h~~~v~~ 233 (304)
T 2ynn_A 158 -SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVSF 233 (304)
T ss_dssp -EEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEEC--CSSCEEE
T ss_pred -EEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCC--CCCCEEE
Confidence 3778999999987543 23333 45667899999987 7789999999999 99999999999999998 7889999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCCCC
Q 017642 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARS 341 (368)
Q Consensus 309 l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 341 (368)
++|+|++.+|++++.||+|+|||+++++.....
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCceeeec
Confidence 999999999999999999999999987765443
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.4e-39 Score=280.88 Aligned_cols=250 Identities=16% Similarity=0.242 Sum_probs=221.1
Q ss_pred ccccCCCCCEEEEEEcCC----CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCC
Q 017642 79 STSSSPPPTLLHISFNQD----HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~----g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 153 (368)
.....|.+.|++++|+++ +.+|++|+ |+.|+||++..........+. +|...+.++.+++++..+++++.|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~-gh~~~v~~~~~~~~~~~l~s~s~D--- 101 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE-GHQLGVVSVDISHTLPIAASSSLD--- 101 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECSSSSEEEEEETT---
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec-cCCCCEEEEEECCCCCEEEEEeCC---
Confidence 345689999999999875 66899999 888999999876655555665 899999999999999999999988
Q ss_pred CCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeE
Q 017642 154 PLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (368)
Q Consensus 154 ~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (368)
+.|++||+.+++.+..+. +...+.+++|+|++.+++ .|+.|++||+++++....+..+...+.+++|+|+++.
T Consensus 102 --~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~- 178 (321)
T 3ow8_A 102 --AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKY- 178 (321)
T ss_dssp --SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSE-
T ss_pred --CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCE-
Confidence 999999999999999888 888999999999999988 5899999999999999899888889999999999985
Q ss_pred EEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 230 VLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
+++ |+.||.|++|+... +.+..+.+|...|.+++|+|++++|++|+.|+. |+|||+++++.+..+.+ |...|.+
T Consensus 179 -las-g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~ 253 (321)
T 3ow8_A 179 -LAS-GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSG--HASWVLN 253 (321)
T ss_dssp -EEE-EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred -EEE-EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcC--CCCceEE
Confidence 443 67899999988654 566778899999999999999999999999999 99999999999988887 7889999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 309 l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
++|+|++++|++++.|++|+|||+.+++....
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~ 285 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHT 285 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCEEEEE
Confidence 99999999999999999999999988765443
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=7.9e-39 Score=290.62 Aligned_cols=250 Identities=15% Similarity=0.216 Sum_probs=223.7
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 78 ~~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.....+|...|++++|+|++.+|++|+ |+.|+|||+.+++.. ..+. +|...+.++.|++++..+++++.| +
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~--~~l~-~h~~~V~~v~~~~~~~~l~sgs~D-----~ 172 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE--RTLK-GHTDSVQDISFDHSGKLLASCSAD-----M 172 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE--EEEe-ccCCcEEEEEEcCCCCEEEEEeCC-----C
Confidence 345668999999999999999999999 888999999877665 4564 788899999999999999999988 9
Q ss_pred cEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEE
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 232 (368)
+|++||+.+++++..+. |...|.+++|+|++.+++ .|+.|++||+++++++..+.+|...+.++.+++++.. ++
T Consensus 173 ~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~--l~ 250 (410)
T 1vyh_C 173 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL--IA 250 (410)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE--EE
T ss_pred eEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCE--EE
Confidence 99999999999999888 999999999999998887 5999999999999999999999999999999999984 44
Q ss_pred eecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCC--------------------CCEEEEEeCCCcEEEEEECCCC
Q 017642 233 CPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQD--------------------GQLLATSSTKGTLVRIFNTLDG 291 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~--------------------g~~l~s~~~dg~~i~iwd~~~~ 291 (368)
+ |+.|+.|++|+... .....+..|...|.+++|+|+ |.+|++|+.|+. |++||++++
T Consensus 251 s-~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~ 328 (410)
T 1vyh_C 251 S-CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTG 328 (410)
T ss_dssp E-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTT
T ss_pred E-EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCC
Confidence 3 67899999988765 556678899999999999996 678999999999 999999999
Q ss_pred ceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCCCC
Q 017642 292 TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARS 341 (368)
Q Consensus 292 ~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 341 (368)
+++..+.+ |...|.+++|+|+|++|++++.||+|++||+.+++.....
T Consensus 329 ~~~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~ 376 (410)
T 1vyh_C 329 MCLMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL 376 (410)
T ss_dssp EEEEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE
T ss_pred ceEEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 99999987 7889999999999999999999999999999887665443
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=278.42 Aligned_cols=239 Identities=16% Similarity=0.247 Sum_probs=216.2
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcE
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (368)
...+|...|.+++|++++.++++++ |+.|++||+.+++.. ..+. .+...+..+.|++++..+++++.| +.|
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~--~~~~-~~~~~~~~~~~spdg~~l~~g~~d-----g~v 146 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSID-AGPVDAWTLAFSPDSQYLATGTHV-----GKV 146 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCTTCCCCEEECTTSSEEEEECTT-----SEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEE--EEEe-CCCccEEEEEECCCCCEEEEEcCC-----CcE
Confidence 3568999999999999999999999 888999999876654 3443 666778889999999999999988 999
Q ss_pred EEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEee
Q 017642 159 MIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (368)
Q Consensus 159 ~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 234 (368)
++||+.+++....+. +...|.+++|+|++++++ .|+.|++||+++++.+..+.+|...+.+++|+|+++. +++
T Consensus 147 ~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~--l~s- 223 (321)
T 3ow8_A 147 NIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL--LVT- 223 (321)
T ss_dssp EEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCE--EEE-
T ss_pred EEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCE--EEE-
Confidence 999999999988887 888999999999999988 5999999999999999999999999999999999984 443
Q ss_pred cCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 235 GLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 235 g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
|+.|+.|++|+... .....+.+|...|.+++|+|++++|++++.|+. |+|||+.+++++..+.. |...|.+++|+|
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~ 300 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFD--HQDQVWGVKYNG 300 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECC--CSSCEEEEEECT
T ss_pred EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEcC--CCCcEEEEEECC
Confidence 77899999988764 566778899999999999999999999999999 99999999999999987 788999999999
Q ss_pred CCCEEEEEeCCCeEEEEEc
Q 017642 314 NAQWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 314 ~~~~l~s~s~dg~i~iwd~ 332 (368)
++++|++++.||+|+|||+
T Consensus 301 ~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 301 NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TSSEEEEEETTCCEEEEEC
T ss_pred CCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999996
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=279.79 Aligned_cols=243 Identities=12% Similarity=0.143 Sum_probs=201.3
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEc-ccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
..|...|.+++|+|++. |++|+ |+.|+|||+++++......+ ..+|...|.+++|++++..+++++.| +.|+
T Consensus 79 ~~~~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~ 152 (344)
T 4gqb_B 79 VQTEAGVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIK 152 (344)
T ss_dssp EEESSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEE
T ss_pred eccCCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEE
Confidence 34667899999999975 45555 88899999998776543221 13788899999999999999999988 9999
Q ss_pred EEeCCCCcEEEEEe-cCCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEEe--ccCCCeeEEEEecCCCeEEEE
Q 017642 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 160 vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~ 232 (368)
+||+.+++++..+. |...|.+++|++++. +++ .|+.|++||+++++....+. .+...+.+++|+|++..+ ++
T Consensus 153 iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-l~ 231 (344)
T 4gqb_B 153 VWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEV-FV 231 (344)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTE-EE
T ss_pred EEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcc-eE
Confidence 99999999999998 999999999999875 444 58999999999998887764 345568899999977663 33
Q ss_pred eecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCC-CEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEE
Q 017642 233 CPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (368)
+|+.||.|++|+.. ++.+..+.+|...|++++|+|++ ++|++|+.|+. |+|||+.+++.+ .+.+ |.+.|++++
T Consensus 232 -sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~-~~~~--H~~~V~~v~ 306 (344)
T 4gqb_B 232 -FGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELF-RSQA--HRDFVRDAT 306 (344)
T ss_dssp -EEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEE-EECC--CSSCEEEEE
T ss_pred -EeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEE-EEcC--CCCCEEEEE
Confidence 37789999998865 46678899999999999999998 58999999999 999999988765 4555 888999999
Q ss_pred EecCCC-EEEEEeCCCeEEEEEccCCC
Q 017642 311 FSSNAQ-WLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 311 ~sp~~~-~l~s~s~dg~i~iwd~~~~~ 336 (368)
|+|+++ +|++++.|++|++|++.+..
T Consensus 307 ~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 307 WSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999986 67789999999999997643
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-38 Score=285.21 Aligned_cols=243 Identities=16% Similarity=0.276 Sum_probs=216.6
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|.+.|++++|+|+|++|++|+ |+.|+|||+...+.. ..+. +|...+.++.|++++..+++++.| +.
T Consensus 144 ~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~--~~~~-~h~~~V~~v~~~p~~~~l~s~s~D-----~~ 215 (410)
T 1vyh_C 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI--RTMH-GHDHNVSSVSIMPNGDHIVSASRD-----KT 215 (410)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE--ECCC-CCSSCEEEEEECSSSSEEEEEETT-----SE
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--EEEc-CCCCCEEEEEEeCCCCEEEEEeCC-----Ce
Confidence 44567999999999999999999999 888999998765544 5564 788899999999999999999888 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCC------
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG------ 227 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~------ 227 (368)
|++||+.+++++..+. |...|.++.+++++.+++ .|+.|++||++++++...+..|...+.+++|+|++.
T Consensus 216 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred EEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 9999999999999998 999999999999999888 599999999999999999999999999999999742
Q ss_pred ------------eEEEEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCcee
Q 017642 228 ------------SLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL 294 (368)
Q Consensus 228 ------------~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~ 294 (368)
..++++ |+.|+.|++|+.. +..+..+.+|...|++++|+|+|++|++|+.||. |+|||+.+++++
T Consensus 296 ~~~~~~~~~~~~g~~l~s-gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~ 373 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCM 373 (410)
T ss_dssp CCSCC-------CCEEEE-EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCC
T ss_pred hccccccccCCCCCEEEE-EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceE
Confidence 123444 7789999999865 4667788899999999999999999999999999 999999999999
Q ss_pred EeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 295 QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 295 ~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
..+.. |...|.+++|+|++.+|++|+.||+|+||+++
T Consensus 374 ~~~~~--h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 374 KTLNA--HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEC--CSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEcC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99987 78899999999999999999999999999864
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.5e-37 Score=272.18 Aligned_cols=251 Identities=14% Similarity=0.150 Sum_probs=217.2
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 78 ~~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.....+|.+.|++++|+|++++|++|+ |+.|+|||+.+.+.. ..+. .+...+.++.|++++..+++++.| +
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~s~~~d-----~ 119 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV--HAIP-LRSSWVMTCAYAPSGNYVACGGLD-----N 119 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE--EEEE-CSSSCEEEEEECTTSSEEEEEETT-----C
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc--eEee-cCCccEEEEEECCCCCEEEEEeCC-----C
Confidence 455678999999999999999999999 888999998876655 3343 677889999999999999999988 9
Q ss_pred cEEEEeCCCCc----EEEEEe-cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeE
Q 017642 157 KVMIWDDHQSR----CIGELS-FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (368)
Q Consensus 157 ~i~vwd~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (368)
.|++||+.+++ ....+. |.+.|.++.|++++.++. .|+.|++||+++++.+..+.+|...|.+++|+|+++.
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~- 198 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL- 198 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCE-
Confidence 99999998753 445555 899999999999998666 6999999999999999999999999999999999874
Q ss_pred EEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 230 VLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
++ +|+.|+.|++|+... .....+.+|...|.+++|+|++++|++|+.||. |+|||+++++.+..+....+...|.+
T Consensus 199 -l~-sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 199 -FV-SGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITS 275 (340)
T ss_dssp -EE-EEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred -EE-EEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEE
Confidence 44 377899999998654 566778899999999999999999999999999 99999999988877764333457999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 309 l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
++|+|+|++|++|+.||.|++||+.+++....
T Consensus 276 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~ 307 (340)
T 1got_B 276 VSFSKSGRLLLAGYDDFNCNVWDALKADRAGV 307 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEEEECCCCeEEEEEcccCcEeeE
Confidence 99999999999999999999999988765443
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.3e-36 Score=269.14 Aligned_cols=239 Identities=12% Similarity=0.146 Sum_probs=206.3
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCc--ceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE--IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
....|...|.+++|+|+|++|++|+ |+.|++|++...+. .....+. +|...+.++.|.+++. +++++.| +
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~-l~s~s~d-----~ 164 (340)
T 1got_B 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQ-IVTSSGD-----T 164 (340)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTE-EEEEETT-----S
T ss_pred EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCc-EEEEECC-----C
Confidence 3457888999999999999999999 88899999976543 2334454 7888889999988877 4555555 9
Q ss_pred cEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEE
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 232 (368)
.|++||+.+++.+..+. |.+.|.+++|+|++.+++ .|+.|++||+++++++..+.+|...|.+++|+|+++. ++
T Consensus 165 ~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~--l~ 242 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA--FA 242 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE--EE
T ss_pred cEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE--EE
Confidence 99999999999999998 999999999999999887 5999999999999999999999999999999999985 44
Q ss_pred eecCCCCeEEEEecCcce-eeeee--ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEE
Q 017642 233 CPGLQKGQVRVEHYASKR-TKFIM--AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~~~~-~~~~~--~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (368)
+ |+.||.|++|+..... +..+. .+...|.+++|+|+|++|++|+.||. |++||+.+++.+..+.+ |...|.++
T Consensus 243 s-~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~~--h~~~v~~~ 318 (340)
T 1got_B 243 T-GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAG--HDNRVSCL 318 (340)
T ss_dssp E-EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEE
T ss_pred E-EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEeec--CCCcEEEE
Confidence 3 6789999999976543 33332 23357999999999999999999999 99999999999989887 88899999
Q ss_pred EEecCCCEEEEEeCCCeEEEEE
Q 017642 310 AFSSNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 310 ~~sp~~~~l~s~s~dg~i~iwd 331 (368)
+|+|+|.+|++|+.|++|+|||
T Consensus 319 ~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 319 GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EECTTSSCEEEEETTSCEEEEC
T ss_pred EEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999996
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=275.09 Aligned_cols=243 Identities=14% Similarity=0.134 Sum_probs=195.3
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecC----------CCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCC
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP----------FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP 151 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~ 151 (368)
..|...|.+++|+|||++|++++|..+++||... ........+ .+...|.+++|++++.++ +++.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~d~~l~-~~s~d- 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGV--QTEAGVADLTWVGERGIL-VASDS- 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEE--EESSCEEEEEEETTTEEE-EEETT-
T ss_pred ccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeee--ccCCCEEEEEEeCCCeEE-EEECC-
Confidence 3577789999999999999999988888887321 011111111 345568999999987655 55555
Q ss_pred CCCCCcEEEEeCCCCcEEEEE-----ecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEe
Q 017642 152 QYPLNKVMIWDDHQSRCIGEL-----SFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVS 223 (368)
Q Consensus 152 ~~~~~~i~vwd~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 223 (368)
|.|+|||+.+++.+..+ .|.+.|++++|+|++++++ .|+.|++||+++++++..+.+|...|.+++|+
T Consensus 103 ----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 ----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp ----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 99999999988754432 2889999999999999988 58999999999999999999999999999999
Q ss_pred cCCCeEEEEeecCCCCeEEEEecCc-ceeeee--eccCcceEEEEECCC-CCEEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 224 QGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFI--MAHDSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 224 ~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~--~~~~~~i~~v~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
+++..+++ +|+.|+.|++|+... +....+ ..|...+.+++|+|+ +++|++|+.||. |+|||+++++++..+.+
T Consensus 179 ~~~~~~l~--s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 179 PHKDSVFL--SCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp SSCTTEEE--EEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEEEEC
T ss_pred CCCCCcee--eeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEEEcC
Confidence 99976443 367899999998765 444444 345667999999995 568999999999 99999999999999988
Q ss_pred ccCcccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCCC
Q 017642 300 GADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 300 ~~~~~~v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
|...|.+++|+|++ ++|++|+.|++|+|||+++++.
T Consensus 256 --h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 256 --HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp --CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred --CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 78899999999998 5799999999999999987754
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.5e-38 Score=278.93 Aligned_cols=247 Identities=15% Similarity=0.204 Sum_probs=199.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEc-ccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
...|...|.+++|+|++++|+++.|+.|+|||+.+.+......+ ..+|...|.+++|++++..+++++.| +.|+
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~ 164 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVK 164 (357)
T ss_dssp EEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEE
Confidence 34688899999999999888776699999999987654322211 12678889999999999999999888 9999
Q ss_pred EEeCCCCcEEEEEe-cCCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEEe--ccCCCeeEEEEecCCCeEEEE
Q 017642 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 160 vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~ 232 (368)
+||+++++.+..+. |...|.+++|++++. +++ .|+.|++||+++++....+. .+...+.+++|+|++..+ ++
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~-la 243 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDT-FA 243 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTE-EE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccce-EE
Confidence 99999999999998 999999999999864 343 58999999999988766553 456678999999987763 34
Q ss_pred eecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCC-CEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEE
Q 017642 233 CPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (368)
+ |+.|+.|++|+.. .+.+..+.+|...|++++|+|++ ++|++|+.|+. |+|||+++++.+..+ + |...|++|+
T Consensus 244 ~-g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~-~--H~~~V~~va 318 (357)
T 4g56_B 244 C-GDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDL-S--HRDFVTGVA 318 (357)
T ss_dssp E-EESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEEC-C--CSSCEEEEE
T ss_pred E-eecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEEC-C--CCCCEEEEE
Confidence 3 7789999998765 46677888999999999999987 58999999999 999999999887654 3 888999999
Q ss_pred Eec-CCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 311 FSS-NAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 311 ~sp-~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
|+| |+++|++++.||+|++|++.+..+.
T Consensus 319 fsP~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 319 WSPLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp ECSSSTTEEEEEETTSCEEEEECC-----
T ss_pred EeCCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 998 8999999999999999999765544
No 11
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-36 Score=264.72 Aligned_cols=247 Identities=15% Similarity=0.198 Sum_probs=200.9
Q ss_pred cccCCCCCEEEEEEcCCC-CEEEEEe-CCeEEEEEecCCCcc---eEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDH-GCFAAGT-DHGFRIYNCDPFREI---FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g-~~l~~~~-d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~ 154 (368)
...+|.+.|++++|+|++ ++|++|+ |+.|++|++...... ....+. +|...+.++.|++++..+++++.|
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~s~D---- 86 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-GHSHIVQDCTLTADGAYALSASWD---- 86 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT----
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe-CCcccEEEEEECCCCCEEEEEeCC----
Confidence 456899999999999965 7999999 888999998753322 234454 888999999999999999999988
Q ss_pred CCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCC---
Q 017642 155 LNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG--- 227 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--- 227 (368)
++|++||+.+++.+..+. |...|.+++|++++.+++ .|+.|++||++ ++++..+.+|...+..+.+.|...
T Consensus 87 -~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~ 164 (319)
T 3frx_A 87 -KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADD 164 (319)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC-----
T ss_pred -CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCC
Confidence 999999999999999988 999999999999999888 59999999996 567778888999999999998643
Q ss_pred -eEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec-----
Q 017642 228 -SLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG----- 300 (368)
Q Consensus 228 -~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~----- 300 (368)
...+++ ++.|+.|++|+... +....+.+|...|.+++|+|+|++|++++.||. |+|||+.+++.+..+...
T Consensus 165 ~~~~l~s-~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~v~~ 242 (319)
T 3frx_A 165 DSVTIIS-AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSAQDEVFS 242 (319)
T ss_dssp -CCEEEE-EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECCSCEEE
T ss_pred CccEEEE-EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecCCCcEEE
Confidence 223443 77899999998765 455668899999999999999999999999999 999999988766555421
Q ss_pred -----------------------------------------cCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 301 -----------------------------------------ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 301 -----------------------------------------~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
.+...+.+++|+|||++|++|+.||.|+|||+.+.
T Consensus 243 ~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 243 LAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 01234566777777777777777777777777653
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-36 Score=269.97 Aligned_cols=253 Identities=12% Similarity=0.116 Sum_probs=214.9
Q ss_pred CcccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCC
Q 017642 77 AESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (368)
Q Consensus 77 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~ 155 (368)
......+|...|++++|+|++++|++|+ |+.|+|||..+..... .+. .+...+.++.|++++..+++++.|
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~--~~~-~~~~~v~~~~~sp~g~~lasg~~d----- 127 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH--AVT-MPCTWVMACAYAPSGCAIACGGLD----- 127 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE--EEE-CSSSCCCEEEECTTSSEEEEESTT-----
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce--EEe-cCCCCEEEEEECCCCCEEEEeeCC-----
Confidence 3455678999999999999999999999 8889999987766553 343 566778999999999999999998
Q ss_pred CcEEEEeCCCC------cEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecC
Q 017642 156 NKVMIWDDHQS------RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQG 225 (368)
Q Consensus 156 ~~i~vwd~~~~------~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 225 (368)
+.+++|++... .....+. |...|.+++|++++..++ .|++|++||+++++++..+.+|...+.+++++++
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCC
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeC
Confidence 99999998643 2344555 999999999999998777 5999999999999999999999999999999886
Q ss_pred CCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcc
Q 017642 226 VGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA 304 (368)
Q Consensus 226 ~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 304 (368)
.+..++++ |+.||.|++|+... +.+..+..|...|++++|+|++.+|++|+.|+. |++||++.++.+..+....+..
T Consensus 208 ~~g~~l~s-gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 208 ETGNTFVS-GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIF 285 (354)
T ss_dssp SSCCEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCS
T ss_pred CCCCEEEE-EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCccc
Confidence 43224454 77899999988654 667778899999999999999999999999999 9999999988877666533445
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 305 EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 305 ~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
.+.+++|+|+|++|++++.|+.|++||+.+++...
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 78999999999999999999999999998876543
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=265.57 Aligned_cols=248 Identities=18% Similarity=0.238 Sum_probs=206.4
Q ss_pred cccCCCC-CEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 80 TSSSPPP-TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 80 ~~~~h~~-~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
....|.. .|++++|+|+|++|++|+ |+.|+||+++.........+..+|...+.+++|++++..+++++.| +.
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~ 84 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----AT 84 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SC
T ss_pred eecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----Cc
Confidence 3456777 999999999999999999 8889999998765443333333788899999999999999999988 99
Q ss_pred EEEEeCCCCc--EEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCC---eEEEEEeccCCCeeEEEEecCCCe
Q 017642 158 VMIWDDHQSR--CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL---KLLHQIETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 158 i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~ 228 (368)
|++||+..+. ++..+. |...|.+++|+|++.+++ .|+.|++||++++ +++..+..|...+.+++|+|+++.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 9999988764 566676 999999999999999888 5999999999765 456677889999999999999985
Q ss_pred EEEEeecCCCCeEEEEecCcc---eeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCC--------------
Q 017642 229 LVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG-------------- 291 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~-------------- 291 (368)
+++ |+.|+.|++|+.... ....+.+|...|.+++|+|+|++|++++.|+. |+|||....
T Consensus 165 --l~s-~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~~ 240 (345)
T 3fm0_A 165 --LAS-ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDPS 240 (345)
T ss_dssp --EEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---CE
T ss_pred --EEE-EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCCc
Confidence 443 678999999887653 34578899999999999999999999999999 999996422
Q ss_pred -ceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 292 -TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 292 -~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
+++..+.+ .|...|.+++|++++..|++++.|+.|++|++.....
T Consensus 241 ~~~~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~ 286 (345)
T 3fm0_A 241 WKCICTLSG-FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSD 286 (345)
T ss_dssp EEEEEEECS-SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSC
T ss_pred cceeEEecC-CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCC
Confidence 22333333 2677899999999999999999999999999986543
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4e-36 Score=261.01 Aligned_cols=247 Identities=16% Similarity=0.150 Sum_probs=199.7
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCC--eEEEEecCCCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN--ILALVGGGPDPQYPLN 156 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~d~~~~~~ 156 (368)
....|.+.|++++|+|+|++|++|+ |+.|+||+++.........+. +|...|.++.|++. +..+++++.| +
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-gH~~~V~~v~~s~~~~g~~l~s~s~D-----~ 77 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYD-----G 77 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-CCSSCEEEEEECCGGGCSEEEEEETT-----T
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-cccCCeEEEEecCCCcCCEEEEEcCC-----C
Confidence 3568999999999999999999999 888999999754433335565 88899999999753 6788888887 9
Q ss_pred cEEEEeCCCCc--EEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEEEEcCCCe--EEEEEeccCCCeeEEEEecCC
Q 017642 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGV 226 (368)
Q Consensus 157 ~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~ 226 (368)
+|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++++. ....+..|...+.+++|+|++
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 99999998874 455565 8899999999997 66766 59999999998763 245667899999999999974
Q ss_pred C-----------eEEEEeecCCCCeEEEEecCcc-----eeeeeeccCcceEEEEECCCC---CEEEEEeCCCcEEEEEE
Q 017642 227 G-----------SLVLVCPGLQKGQVRVEHYASK-----RTKFIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIFN 287 (368)
Q Consensus 227 ~-----------~~~l~~~g~~dg~i~i~~~~~~-----~~~~~~~~~~~i~~v~~sp~g---~~l~s~~~dg~~i~iwd 287 (368)
. ..++++ |+.|+.|++|+.... ....+.+|...|.+++|+|++ .+|++++.|+. |+|||
T Consensus 158 ~~~~~~~~~~~~~~~l~s-gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~iWd 235 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIWT 235 (297)
T ss_dssp ------------CCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEE
T ss_pred ccccccCCCCCCcceEEE-EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EEEEE
Confidence 1 113454 778999999987542 445688999999999999985 79999999999 99999
Q ss_pred CCCCce---eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 288 TLDGTL---LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 288 ~~~~~~---~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
+.+... ...+....|...|.+++|+|+|++|++++.|++|+||+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred eCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 987531 12222123677899999999999999999999999999864
No 15
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=9.1e-36 Score=269.05 Aligned_cols=239 Identities=18% Similarity=0.248 Sum_probs=208.0
Q ss_pred CCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEe
Q 017642 84 PPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
+...|.+++|+|+|++|++|+ |+.|+|||+++.+.. ..+. +|...+.++.|++++..+++++.| +.|++||
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd 193 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV--MILQ-GHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWD 193 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE--EEEc-cCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEE
Confidence 344699999999999999999 888999999876544 4454 788899999999999999999888 9999999
Q ss_pred CCCCcEEEEEecCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEE-------eccCCCeeEEEEecCCCeEEE
Q 017642 163 DHQSRCIGELSFRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQI-------ETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~l 231 (368)
+.++++...+.+...+.+++|+| ++.+++ .|+.|++||+++++.+..+ .+|...|.+++|+++++. +
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~--l 271 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS--V 271 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE--E
T ss_pred CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE--E
Confidence 99999999888888999999999 888887 5999999999999887776 468889999999999985 4
Q ss_pred EeecCCCCeEEEEecCc-------------ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 232 VCPGLQKGQVRVEHYAS-------------KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~-------------~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
++ |+.|+.|++|+... .....+.+|...|.+++|++++++|++|+.|+. |++||+.+++.+..+.
T Consensus 272 ~s-~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~ 349 (393)
T 1erj_A 272 VS-GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQ 349 (393)
T ss_dssp EE-EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EE-EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEEC
Confidence 43 77899999998653 234567789999999999999999999999999 9999999999999998
Q ss_pred eccCcccEEEEEEec------CCCEEEEEeCCCeEEEEEccCCC
Q 017642 299 RGADRAEIYSLAFSS------NAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 299 ~~~~~~~v~~l~~sp------~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
+ |...|.+++|++ ++++|++|+.||+|+||++.+.+
T Consensus 350 ~--h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 350 G--HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp C--CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred C--CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 7 788999999986 68899999999999999997653
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=263.37 Aligned_cols=249 Identities=16% Similarity=0.178 Sum_probs=202.1
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
...|...|.+++|+|+|++|++|+ |+.++||++..........+. +|...+.+++|++++..+++++.| +.|+
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~ 130 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRD-----KSVW 130 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETT-----SCEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECC-----CeEE
Confidence 357999999999999999999999 888999999876655556665 888999999999999999999988 9999
Q ss_pred EEeCCCCc---EEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCe--EEEEEeccCCCeeEEEEecCCCeEE
Q 017642 160 IWDDHQSR---CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 160 vwd~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (368)
+||+.++. ++..+. |...|.+++|+|++.+++ .|+.|++||+++++ +...+.+|...|.+++|+|+++.
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~-- 208 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR-- 208 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE--
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE--
Confidence 99998764 345555 889999999999999888 59999999998775 45678889999999999999985
Q ss_pred EEeecCCCCeEEEEecCc----------------ceeeeeec-cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCc-
Q 017642 231 LVCPGLQKGQVRVEHYAS----------------KRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT- 292 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~~----------------~~~~~~~~-~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~- 292 (368)
|++ |+.|+.|++|+... ..+..+.+ |...|.+++|++++..|++++.|+. |++|+...+.
T Consensus 209 l~s-~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~~ 286 (345)
T 3fm0_A 209 LAS-CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNSD 286 (345)
T ss_dssp EEE-EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTSC
T ss_pred EEE-EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCCC
Confidence 443 77899999997521 12233333 8889999999999999999999999 9999987543
Q ss_pred ---eeEeeE---eccCcccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCC
Q 017642 293 ---LLQEVR---RGADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 293 ---~~~~~~---~~~~~~~v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
....+. ...|...|.+++|+|++ .+|++++.||+|++|++.++++..
T Consensus 287 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 287 PQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred cceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 111111 11278899999999998 599999999999999999887653
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.2e-35 Score=283.20 Aligned_cols=252 Identities=12% Similarity=0.172 Sum_probs=208.3
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 78 ~~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
......|...|++++|+|+|++||+|+ |+.|+|||+...+......+. .|...+.+++|++++..+++++.+.. ..+
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~-~~~~~v~~v~fs~dg~~l~~~~~~~~-~~~ 129 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIP-VFSGPVKDISWDSESKRIAAVGEGRE-RFG 129 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEE-CSSSCEEEEEECTTSCEEEEEECCSS-CSE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeec-ccCCceEEEEECCCCCEEEEEECCCC-cee
Confidence 345568999999999999999999999 888999999766555555564 78889999999999988877654300 013
Q ss_pred cEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccE-EE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRII-VV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~-l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
.|++|| .++....+. |...|.+++|+|++.. ++ .|++|++||.++++++..+.+|...|.+++|+|+++. +
T Consensus 130 ~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~--l 205 (611)
T 1nr0_A 130 HVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL--F 205 (611)
T ss_dssp EEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE--E
T ss_pred EEEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCE--E
Confidence 678887 455666666 9999999999999863 55 5999999999999999999999999999999999984 4
Q ss_pred EeecCCCCeEEEEecC-cceeeeee-------ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe----
Q 017642 232 VCPGLQKGQVRVEHYA-SKRTKFIM-------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR---- 299 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~-~~~~~~~~-------~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~---- 299 (368)
++ |+.|+.|++|+.. ++....+. +|...|.+++|+|+|++|++++.|+. |+|||+.+++.+..+..
T Consensus 206 as-~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 206 AS-TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EE-EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECCSSG
T ss_pred EE-EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeecCCCCc
Confidence 43 7789999999854 45555553 79999999999999999999999999 99999998876654421
Q ss_pred -------------------------------------ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 300 -------------------------------------GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 300 -------------------------------------~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
..|...|.+++|+|||++|++++.|++|++||+.+++.
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 12677899999999999999999999999999988754
No 18
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.5e-35 Score=259.12 Aligned_cols=248 Identities=18% Similarity=0.226 Sum_probs=205.2
Q ss_pred ccccCCCCCEEEEEE-----cC-CCCEEEEEe-CCeEEEEEecCCCc-----ceEEEcccCCceeEEEEEEeCCeEEEEe
Q 017642 79 STSSSPPPTLLHISF-----NQ-DHGCFAAGT-DHGFRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCNILALVG 146 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~-----s~-~g~~l~~~~-d~~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~s 146 (368)
....+|.+.|++++| ++ ++++|++|+ |+.|+|||+...+. .....+. +|...+.++.|++++.++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-GHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-CCSSCEEEEEECSSTTEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-cCCCceEEEEECCCCCEEEE
Confidence 345689999999999 76 899999999 88899999975432 2234454 78889999999999999999
Q ss_pred cCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEe---ccCCCeeE
Q 017642 147 GGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE---TIANPKGL 219 (368)
Q Consensus 147 ~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~---~~~~~v~~ 219 (368)
++.| +.|++||+++++.+..+. |...|.+++|+|++.+++ .|+.|++||+... ....+. .|...+.+
T Consensus 94 ~s~D-----~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 94 SSWD-----KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EETT-----SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEE
T ss_pred EcCC-----CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeee
Confidence 9988 999999999999999988 999999999999999887 5999999999743 333333 57788999
Q ss_pred EEEecCCCe--------EEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC-
Q 017642 220 CAVSQGVGS--------LVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD- 290 (368)
Q Consensus 220 ~~~~~~~~~--------~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~- 290 (368)
++|+|++.. .++++ ++.|+.|++|+........+.+|...|.+++|+|+|++|++|+.||. |+|||+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~~ 245 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFAS-VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILNL 245 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEE-EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSCC
T ss_pred eeeccccccccccCCCCCEEEE-EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCCC
Confidence 999998731 13444 67899999999887778888999999999999999999999999999 99999954
Q ss_pred CceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 291 GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
......+. +...|.+++|+|++.+++++ .|+.|++||+.+++...
T Consensus 246 ~~~~~~~~---~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 246 TYPQREFD---AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp SSCSEEEE---CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCS
T ss_pred cccceeec---CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCc
Confidence 44444443 34579999999999988755 57789999998876543
No 19
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.1e-36 Score=263.28 Aligned_cols=245 Identities=17% Similarity=0.162 Sum_probs=196.4
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC--CeEEEEecCCCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQYPLN 156 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~d~~~~~~ 156 (368)
....|.+.|++++|+|+|++|++|+ |+.|+|||+.+........+. +|...|.+++|++ ++..+++++.| +
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-gH~~~V~~v~~~~~~~~~~l~s~s~D-----~ 81 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR-GHEGPVWQVAWAHPMYGNILASCSYD-----R 81 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE-CCSSCEEEEEECCGGGSSCEEEEETT-----S
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-CCCccEEEEEeCCCCCCCEEEEEECC-----C
Confidence 4468999999999999999999999 888999999876554445665 8889999999975 36778888887 9
Q ss_pred cEEEEeCCCCc--EEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEEEEcCCCeE---EEEEeccCCCeeEEEEecC
Q 017642 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLKL---LHQIETIANPKGLCAVSQG 225 (368)
Q Consensus 157 ~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~vwd~~~~~~---~~~~~~~~~~v~~~~~~~~ 225 (368)
+|++||+++++ ....+. |...|.+++|+|+ +.+++ .|+.|++||++.+.. ...+..|...+.+++|+|+
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 99999998874 556666 8999999999997 66776 599999999987532 3445678888999999987
Q ss_pred CC---------------eEEEEeecCCCCeEEEEecCc----ceeeeeeccCcceEEEEECCCC----CEEEEEeCCCcE
Q 017642 226 VG---------------SLVLVCPGLQKGQVRVEHYAS----KRTKFIMAHDSRIACFALTQDG----QLLATSSTKGTL 282 (368)
Q Consensus 226 ~~---------------~~~l~~~g~~dg~i~i~~~~~----~~~~~~~~~~~~i~~v~~sp~g----~~l~s~~~dg~~ 282 (368)
.. ..++++ |+.|+.|++|+... ..+..+.+|...|.+++|+|++ ++|++++.|+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~s-gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~- 239 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFAS-GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR- 239 (316)
T ss_dssp CCC------CCSCCCCCCCBEEC-CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE-
T ss_pred cCCccccccccccCccccceEEE-ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe-
Confidence 31 113454 88999999998764 3566788999999999999987 79999999999
Q ss_pred EEEEECCCC---c-eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 283 VRIFNTLDG---T-LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 283 i~iwd~~~~---~-~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
|+|||+.+. + ....+.. |...|.+++|+|++++|++++.|++|+||+...
T Consensus 240 v~iw~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 999998763 1 1223444 678999999999999999999999999999863
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.1e-36 Score=268.42 Aligned_cols=245 Identities=14% Similarity=0.164 Sum_probs=193.6
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeC-------CeEEEEEecCCCcc--eEEEcccCCceeEEEEEEeCCeEEEEecCCCCC
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGTD-------HGFRIYNCDPFREI--FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ 152 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~d-------~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~ 152 (368)
..|...|++++|+|||++|++|++ +.|++|+...+... ..... ..|...|.+++|++++.+++++. |
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~-~~~~~~V~~~~~s~d~~~l~~s~-d-- 114 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAG-VQTEAGVTDVAWVSEKGILVASD-S-- 114 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEE-EECSSCEEEEEEETTTEEEEEET-T--
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEeccc-CCCCCCEEEEEEcCCCCEEEEEC-C--
Confidence 469999999999999999999983 34888876554321 11111 15677799999999988777654 4
Q ss_pred CCCCcEEEEeCCCCcEEEE-----EecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEec
Q 017642 153 YPLNKVMIWDDHQSRCIGE-----LSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (368)
Q Consensus 153 ~~~~~i~vwd~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 224 (368)
|.|+|||+.+++.... ..|...|.+++|+|++.+++ .|+.|++||+++++++..+..|...+.+++|++
T Consensus 115 ---g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 115 ---GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp ---SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ---CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 9999999988865432 23889999999999999888 589999999999999999999999999999999
Q ss_pred CCCeEEEEeecCCCCeEEEEecCc-ceeee--eeccCcceEEEEECCCC-CEEEEEeCCCcEEEEEECCCCceeEeeEec
Q 017642 225 GVGSLVLVCPGLQKGQVRVEHYAS-KRTKF--IMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFNTLDGTLLQEVRRG 300 (368)
Q Consensus 225 ~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~--~~~~~~~i~~v~~sp~g-~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~ 300 (368)
+++.+++. ++.||.|++|+... +.... +..|...+.+++|+|++ .+|++|+.|+. |++||+++++.+..+..
T Consensus 192 ~~~~~~~s--~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~~~~- 267 (357)
T 4g56_B 192 GKDTIFLS--CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQTSAV- 267 (357)
T ss_dssp TCSSCEEE--EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEEECC-
T ss_pred CCCceeee--eccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEEEec-
Confidence 98764443 56899999998765 33333 34577789999999975 68999999999 99999999999988887
Q ss_pred cCcccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCC
Q 017642 301 ADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 301 ~~~~~v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
|...|.+++|+|++ ++|++++.|++|+|||+++++..
T Consensus 268 -~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 268 -HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp -CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred -cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 78899999999987 57899999999999999887654
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-35 Score=258.94 Aligned_cols=242 Identities=17% Similarity=0.279 Sum_probs=189.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCC-----cceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFR-----EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.|...|.+++|+|++++|++|+ |+.|+||+++... ......+. +|...+.++.|++++..+++++.| +
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~sp~g~~las~s~D-----~ 129 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIE-GHENEVKGVAWSNDGYYLATCSRD-----K 129 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEETT-----S
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEc-CCCCcEEEEEECCCCCEEEEEeCC-----C
Confidence 4999999999999999999999 8889999985321 22334454 788899999999999999999988 9
Q ss_pred cEEEEeCCC----CcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCC--eEEEEEeccCCCeeEEEEecCC
Q 017642 157 KVMIWDDHQ----SRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL--KLLHQIETIANPKGLCAVSQGV 226 (368)
Q Consensus 157 ~i~vwd~~~----~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~ 226 (368)
.|++||+.. .+++..+. |...|.+++|+|++.+++ .|+.|++||+.++ +++..+.+|...|.+++|++++
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 209 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTE 209 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSS
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCC
Confidence 999999943 24566776 899999999999999888 5999999999776 6788899999999999999985
Q ss_pred CeEEEEeecCCCCeEEEEecCcc---------eeeeeec-cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCc--ee
Q 017642 227 GSLVLVCPGLQKGQVRVEHYASK---------RTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT--LL 294 (368)
Q Consensus 227 ~~~~l~~~g~~dg~i~i~~~~~~---------~~~~~~~-~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~--~~ 294 (368)
....+++ |+.|+.|++|+.... ....+.. |...|.+++|++++ +|++++.||. |+|||..+++ .+
T Consensus 210 ~~~~l~s-~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 210 GVFRLCS-GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEWKVF 286 (330)
T ss_dssp SSCEEEE-EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEEEEE
T ss_pred CeeEEEE-EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCceEEE
Confidence 4434554 778999999987542 2333444 89999999999765 7999999999 9999998774 23
Q ss_pred EeeEeccCcc-cEEEEEEec--CCCEEEEEeCCCeEEEEEccC
Q 017642 295 QEVRRGADRA-EIYSLAFSS--NAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 295 ~~~~~~~~~~-~v~~l~~sp--~~~~l~s~s~dg~i~iwd~~~ 334 (368)
.... ..|.. .|.+++|+| ++++|++++.||+|+|||+++
T Consensus 287 ~~~~-~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 287 AKRA-LCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEES-CTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred eccc-cccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 2221 12555 899999999 789999999999999999865
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.4e-35 Score=266.65 Aligned_cols=253 Identities=13% Similarity=0.190 Sum_probs=198.2
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCC----
Q 017642 78 ESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ---- 152 (368)
Q Consensus 78 ~~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~---- 152 (368)
.....+|.+.|++++|+|++++|++|+ |+.|+|||+.+.+.. ..+. .|...+.+++|++++..+++++.|..
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~--~~~~-~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKT--HAIK-LHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEE--EEEE-CCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccc--eEEe-cCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 345678999999999999999999999 888999998766544 2232 34444555555554444444332200
Q ss_pred -----------------------------------------CCCCcEEEEeCCCCcEEEEE-----e-cCCceeEEEEee
Q 017642 153 -----------------------------------------YPLNKVMIWDDHQSRCIGEL-----S-FRSEVRSVKLRR 185 (368)
Q Consensus 153 -----------------------------------------~~~~~i~vwd~~~~~~~~~~-----~-~~~~v~~~~~~~ 185 (368)
-.|+.|++||+.+++.+..+ . |...|.+++|++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 01388999999999888777 3 778899999987
Q ss_pred -CccEEE---eCCcEEEEEcC-CCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeecc--
Q 017642 186 -DRIIVV---LEQKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAH-- 257 (368)
Q Consensus 186 -~~~~l~---~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~-- 257 (368)
++.+++ .|+.|++||++ .++.+..+.+|...|.+++|+|+++. ++ +|+.||.|++|+... ..+..+..+
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~--l~-s~s~D~~i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR--FG-TGSDDGTCRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE--EE-EECSSSCEEEEETTTTEEEEEECCCCS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe--EE-EEcCCCeEEEEECCCCcEEEEeccccc
Confidence 677776 59999999997 45778889999999999999999985 44 378999999998765 344444332
Q ss_pred -----CcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe--ccCcccEEEEEEecCCCEEEEEeCCCeEEEE
Q 017642 258 -----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR--GADRAEIYSLAFSSNAQWLAVSSDKGTVHVF 330 (368)
Q Consensus 258 -----~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~--~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iw 330 (368)
...|++++|+|+|++|++|+.||. |+|||+.+++.+..+.. ..|.+.|.+++|+|||++|++|+.|++|+||
T Consensus 293 ~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 293 RNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp SSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred ccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 234899999999999999999999 99999999988877631 2278899999999999999999999999999
Q ss_pred EccCCCC
Q 017642 331 NLKVNSG 337 (368)
Q Consensus 331 d~~~~~~ 337 (368)
++...++
T Consensus 372 ~~~~~~~ 378 (380)
T 3iz6_a 372 AFSGHRK 378 (380)
T ss_dssp ECCSSSS
T ss_pred ecCCCcc
Confidence 9986543
No 23
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.9e-35 Score=263.72 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=204.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEccc-----------------CCceeEEEEEEeCCeEEEE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER-----------------GGGIGVVEMLFRCNILALV 145 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~ 145 (368)
.|...|.+++|+|||++|++|+++.++||++.+++.... +.. .+...+.+++|++++..++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVAR--LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEE--ECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEE--ecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 599999999999999999999988999999987665422 210 1223488999999999999
Q ss_pred ecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEE
Q 017642 146 GGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCA 221 (368)
Q Consensus 146 s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 221 (368)
+++.| +.|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||++++++...+. +...+..++
T Consensus 140 s~~~d-----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~ 213 (393)
T 1erj_A 140 TGAED-----RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVA 213 (393)
T ss_dssp EEETT-----SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEE
T ss_pred EEcCC-----CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEE
Confidence 99888 999999999999998888 999999999999998888 59999999999999887775 556789999
Q ss_pred Eec-CCCeEEEEeecCCCCeEEEEecCcc-eeeee-------eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCC-
Q 017642 222 VSQ-GVGSLVLVCPGLQKGQVRVEHYASK-RTKFI-------MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG- 291 (368)
Q Consensus 222 ~~~-~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~-------~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~- 291 (368)
++| +++. +++ |+.|+.|++|+.... .+..+ .+|...|.+++|+|+|++|++|+.|+. |++||+++.
T Consensus 214 ~~~~~~~~--l~~-~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~~ 289 (393)
T 1erj_A 214 VSPGDGKY--IAA-GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNAN 289 (393)
T ss_dssp ECSTTCCE--EEE-EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC----
T ss_pred EECCCCCE--EEE-EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCCC
Confidence 999 6653 443 678999999987653 33333 578999999999999999999999999 999999763
Q ss_pred -----------ceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCCCC
Q 017642 292 -----------TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARS 341 (368)
Q Consensus 292 -----------~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 341 (368)
.+...+.+ |...|.+++|++++++|++++.|+.|++||+.+++.....
T Consensus 290 ~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 290 NKSDSKTPNSGTCEVTYIG--HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp -----------CEEEEEEC--CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CcccccCCCCCcceEEEec--ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE
Confidence 34455665 7789999999999999999999999999999988765433
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.9e-35 Score=259.51 Aligned_cols=240 Identities=13% Similarity=0.178 Sum_probs=205.6
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCc----ceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE----IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~ 154 (368)
....|...|.+++|+|+|.+|++|+ |+.+++|++..... .....+. .|...+.++.|++++..+++++.|
T Consensus 101 ~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D---- 175 (354)
T 2pbi_B 101 AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGD---- 175 (354)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETT----
T ss_pred EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCC----
Confidence 3456778899999999999999999 88899999864321 1223343 678889999999999888888887
Q ss_pred CCcEEEEeCCCCcEEEEEe-cCCceeEEEEee--CccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCe
Q 017642 155 LNKVMIWDDHQSRCIGELS-FRSEVRSVKLRR--DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (368)
++|++||+++++.+..+. |...|.++++++ ++.+++ .|+.|++||+++++++..+..|...|.+++|+|+++.
T Consensus 176 -~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 254 (354)
T 2pbi_B 176 -GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDA 254 (354)
T ss_dssp -SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred -CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCE
Confidence 999999999999999998 999999999987 456666 5999999999999999999999999999999999984
Q ss_pred EEEEeecCCCCeEEEEecCcce-eeeeec--cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCccc
Q 017642 229 LVLVCPGLQKGQVRVEHYASKR-TKFIMA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE 305 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~~~-~~~~~~--~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 305 (368)
+++ |+.|+.|++|+..... +..+.. +...+.+++|+|+|++|++|+.|+. |+|||+.+++.+..+.+ |...
T Consensus 255 --l~s-~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~~--h~~~ 328 (354)
T 2pbi_B 255 --FAS-GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILFG--HENR 328 (354)
T ss_dssp --EEE-EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEECC--CSSC
T ss_pred --EEE-EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEEC--CCCc
Confidence 443 6789999999876543 333332 3457899999999999999999999 99999999999988887 8889
Q ss_pred EEEEEEecCCCEEEEEeCCCeEEEEE
Q 017642 306 IYSLAFSSNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 306 v~~l~~sp~~~~l~s~s~dg~i~iwd 331 (368)
|.+++|+|||++|++|+.|++|+||+
T Consensus 329 v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 329 VSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999996
No 25
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.1e-34 Score=253.57 Aligned_cols=254 Identities=15% Similarity=0.290 Sum_probs=213.5
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|++++|+|+|++|++|+ |+.|++|++..++.. ..+. .|...+.++.|++++..+++++.| +.
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~~~d-----~~ 88 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTIS-GHKLGISDVAWSSDSNLLVSASDD-----KT 88 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc--hhhc-cCCCceEEEEEcCCCCEEEEECCC-----CE
Confidence 34568999999999999999999999 888999998766544 4454 788899999999999999999888 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+.+++|+++++. +++
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~ 166 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSL--IVS 166 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE--EEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCE--EEE
Confidence 9999999999999998 999999999999999888 5899999999999999999999999999999999984 333
Q ss_pred ecCCCCeEEEEecCc-ceeeee-eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEE
Q 017642 234 PGLQKGQVRVEHYAS-KRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF 311 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~-~~~~~~-~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 311 (368)
|+.||.|++|+... +.+..+ ..+...+..++|+|++++|++++.||. |++||+++++.+..+..+..........|
T Consensus 167 -~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 167 -SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp -EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred -EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 67899999988765 334443 456678999999999999999999999 99999999999988876322222223344
Q ss_pred e-cCCCEEEEEeCCCeEEEEEccCCCCCCCCCCC
Q 017642 312 S-SNAQWLAVSSDKGTVHVFNLKVNSGSARSEPR 344 (368)
Q Consensus 312 s-p~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 344 (368)
+ +++.+|++|+.||.|++||+++++.......+
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 278 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH 278 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCCEEEEECCC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCchhhhhhhcc
Confidence 4 67889999999999999999988765544433
No 26
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1e-34 Score=258.57 Aligned_cols=241 Identities=32% Similarity=0.531 Sum_probs=197.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
...|...|++++|+|||++|++|++++++||++++.+......+ +...+..+.++.+.+++++++ | +.|++
T Consensus 15 ~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-d-----~~v~i 85 (355)
T 3vu4_A 15 ENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM---RHLSKVRMLHRTNYVAFVTGV-K-----EVVHI 85 (355)
T ss_dssp ----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC---SCCCEEEECTTSSEEEEECSS-T-----TEEEE
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec---CCeEEEEEcCCCCEEEEEECC-c-----cEEEE
Confidence 36789999999999999999999988999999987665544332 345566666666666555554 3 89999
Q ss_pred EeCCCCcEEEEEecCCceeEEEEeeCccEEEeCCcEEEEEcCCC-eEEEEEeccCCCeeEEEEecCCCeEEEEee-cCCC
Q 017642 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQGVGSLVLVCP-GLQK 238 (368)
Q Consensus 161 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-g~~d 238 (368)
||+.+++.+..+.+...|.+++++++...++.|+.|++||+.++ +.+..+.. +...+++++ .. ++++ |+.|
T Consensus 86 Wd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~--la~~sg~~~ 158 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GL--LVYSNEFNL 158 (355)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TE--EEEEESSCT
T ss_pred EECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cE--EEEeCCCcC
Confidence 99999999999998899999999999877779999999999988 66666654 455667777 33 4443 7899
Q ss_pred CeEEEEecCcce-----------------eeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc
Q 017642 239 GQVRVEHYASKR-----------------TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA 301 (368)
Q Consensus 239 g~i~i~~~~~~~-----------------~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~ 301 (368)
|.|++|+..... +..+.+|...|++++|+|+|++|++|+.|++.|+|||+++++++..+..+.
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 999999887643 677899999999999999999999999999339999999999999998443
Q ss_pred CcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 302 DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 302 ~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
|...|.+++|+|+|++|++++.|++|+|||++.+..
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~ 274 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQD 274 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSC
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCC
Confidence 678999999999999999999999999999987643
No 27
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-34 Score=253.90 Aligned_cols=243 Identities=13% Similarity=0.208 Sum_probs=196.9
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEc-ccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDF-ERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
....|.+.|++++|+++ +|++|+ |+.|+||++..........+ ...|...+.+++|++++..+++++.| +.
T Consensus 9 ~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-----~~ 81 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-----ST 81 (330)
T ss_dssp EEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-----SC
T ss_pred eeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-----Cc
Confidence 45689999999999988 889888 88899999986544333444 21388899999999999999999988 99
Q ss_pred EEEEeCCC-------CcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCC----CeEEEEEeccCCCeeEEEE
Q 017642 158 VMIWDDHQ-------SRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFAD----LKLLHQIETIANPKGLCAV 222 (368)
Q Consensus 158 i~vwd~~~-------~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~----~~~~~~~~~~~~~v~~~~~ 222 (368)
|++||+.. .+.+..+. |...|.+++|+|++.+++ .|+.|++||++. .+++..+..|...|.+++|
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 99999853 34566676 999999999999999888 599999999943 3567788899999999999
Q ss_pred ecCCCeEEEEeecCCCCeEEEEecCc---ceeeeeeccCcceEEEEECCC--CCEEEEEeCCCcEEEEEECCCC------
Q 017642 223 SQGVGSLVLVCPGLQKGQVRVEHYAS---KRTKFIMAHDSRIACFALTQD--GQLLATSSTKGTLVRIFNTLDG------ 291 (368)
Q Consensus 223 ~~~~~~~~l~~~g~~dg~i~i~~~~~---~~~~~~~~~~~~i~~v~~sp~--g~~l~s~~~dg~~i~iwd~~~~------ 291 (368)
+|+++. |++ |+.|+.|++|+... ..+..+.+|...|.+++|+|+ +.+|++|+.|+. |+|||+..+
T Consensus 162 ~p~~~~--l~s-~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 162 HPSEAL--LAS-SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDDQQ 237 (330)
T ss_dssp CSSSSE--EEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTSCE
T ss_pred CCCCCE--EEE-EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCccccc
Confidence 999874 443 77899999997653 466778899999999999998 679999999999 999998764
Q ss_pred --ceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 292 --TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 292 --~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
.....+.. .|...|.+++|++++ +|++++.||.|+|||+.++
T Consensus 238 ~~~~~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 238 EWVCEAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp EEEEEEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred eeEEeeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 23333332 267899999999665 7899999999999999765
No 28
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.4e-34 Score=251.81 Aligned_cols=250 Identities=17% Similarity=0.193 Sum_probs=205.8
Q ss_pred cccCCCCCEEEEEEcCC-CCEEEEEe-CCeEEEEEecCCCcc---eEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQD-HGCFAAGT-DHGFRIYNCDPFREI---FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~ 154 (368)
+..+|.+.|++|+|+|+ +++|++|+ |+.|+|||+...+.. ....+. +|...+.++.|++++..+++++.|
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-~h~~~V~~~~~s~dg~~l~s~~~d---- 107 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-GHSHFVSDVVISSDGQFALSGSWD---- 107 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC-CCSSCEEEEEECTTSSEEEEEETT----
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe-CCCCCEEEEEECCCCCEEEEEccc----
Confidence 45689999999999998 68999999 888999999865532 334554 788899999999999999999988
Q ss_pred CCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEE-EEEeccCCCeeEEEEecCCCeE
Q 017642 155 LNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLL-HQIETIANPKGLCAVSQGVGSL 229 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~ 229 (368)
+.|++|+........... +...+..+.+++++.+++ .|+.+++||+...... .....|...+..++|++++...
T Consensus 108 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 108 -GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred -ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 999999999988887777 788889999999988877 5899999999766543 3345678889999999988776
Q ss_pred EEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe---------
Q 017642 230 VLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR--------- 299 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~--------- 299 (368)
++++ ++.|+.|++|+... +.+..+.+|...|++++|+|++++|++|+.||. |+|||+++++.+..+..
T Consensus 187 ~~~s-~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~~~~v~~~~~ 264 (340)
T 4aow_A 187 IIVS-CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDGGDIINALCF 264 (340)
T ss_dssp EEEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred EEEE-EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecCCceEEeeec
Confidence 6665 67899999988765 556678899999999999999999999999999 99999987655443321
Q ss_pred --------------------------------------ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 300 --------------------------------------GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 300 --------------------------------------~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
..|...|++++|+|||++|++|+.||.|+|||+++|++
T Consensus 265 ~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 265 SPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp CSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred CCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 12456788999999999999999999999999988764
No 29
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.3e-34 Score=255.33 Aligned_cols=194 Identities=13% Similarity=0.110 Sum_probs=160.2
Q ss_pred EEEEEEeCCeEE--EEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEE
Q 017642 132 VVEMLFRCNILA--LVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLL 207 (368)
Q Consensus 132 ~~~~~~~~~~~~--~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~ 207 (368)
+..++|+|++.. +++++.| +.|+|||+.+++++..+.|...|.+++|+|||++++ .++.+.+|+..+++.+
T Consensus 136 ~~~v~fSpDg~~la~as~~~d-----~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVP-----AIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSS-----CEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEE
T ss_pred EEEEEEcCCCCEEEEEECCCC-----CEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcce
Confidence 446778887754 4567777 999999999999999999999999999999999998 6888999998888765
Q ss_pred EEE--eccCCCeeEEEEecCCCeEEEEeecCCCC----eEEEEecCcce-----eeeeeccCcceEEEEECCCCCEEEEE
Q 017642 208 HQI--ETIANPKGLCAVSQGVGSLVLVCPGLQKG----QVRVEHYASKR-----TKFIMAHDSRIACFALTQDGQLLATS 276 (368)
Q Consensus 208 ~~~--~~~~~~v~~~~~~~~~~~~~l~~~g~~dg----~i~i~~~~~~~-----~~~~~~~~~~i~~v~~sp~g~~l~s~ 276 (368)
... ..|...+.+++|+|++..++.+ +.|+ .+++|+..... ...+.+|...|++++|+|||++||+|
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~---s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAA---SLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEE---EESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEE---ecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 433 4577789999999999864433 2343 45556654422 34567899999999999999999999
Q ss_pred eCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 277 STKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 277 ~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
+.|+. |+|||+++++++..+..+ |...|++|+|+|||++|++++.|++|+|||+...
T Consensus 288 s~D~~-V~iwd~~~~~~~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 288 SNDNS-IALVKLKDLSMSKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSC-EEEEETTTTEEEEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cCCCE-EEEEECCCCcEEEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999 999999999999876433 8899999999999999999999999999999543
No 30
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.4e-34 Score=250.68 Aligned_cols=243 Identities=13% Similarity=0.180 Sum_probs=203.4
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcE
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (368)
....|...|.+++|++++++|++|+ |+.|++||+.+++.. ..+. .|...+.++.|++++..+++++.| +.|
T Consensus 50 ~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~sgs~D-----~~v 121 (304)
T 2ynn_A 50 SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV--VDFE-AHPDYIRSIAVHPTKPYVLSGSDD-----LTV 121 (304)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE--EEEE-CCSSCEEEEEECSSSSEEEEEETT-----SCE
T ss_pred EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE--EEEe-CCCCcEEEEEEcCCCCEEEEECCC-----CeE
Confidence 4457888999999999999999999 888999999877655 4454 788999999999999999999988 999
Q ss_pred EEEeCCCCc-EEEEEe-cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEe-ccCCCeeEEEEecCCCeEEE
Q 017642 159 MIWDDHQSR-CIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 159 ~vwd~~~~~-~~~~~~-~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l 231 (368)
++||++++. ....+. |...|.+++|+| ++.+++ .|+.|++||+++++....+. .+...+..+.+++.++..++
T Consensus 122 ~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp EEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred EEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence 999998874 445566 999999999999 566666 59999999998877665554 45577888999885544345
Q ss_pred EeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEE
Q 017642 232 VCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (368)
++ |+.|+.|++|+... +.+..+.+|...|.+++|+|++++|++|+.||. |+|||+.+++.+..+.. |...+.+++
T Consensus 202 ~s-~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-i~iWd~~~~~~~~~~~~--~~~~~~~~~ 277 (304)
T 2ynn_A 202 IT-ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNV--GLERSWCIA 277 (304)
T ss_dssp EE-EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCCEEEEECC--SSSSEEEEE
T ss_pred EE-EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-EEEEECCCCceeeeccC--CCccEEEEE
Confidence 54 77899999988765 567788999999999999999999999999999 99999999999999887 677899999
Q ss_pred EecCCC--EEEEEeCCCeEEEEEccCC
Q 017642 311 FSSNAQ--WLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 311 ~sp~~~--~l~s~s~dg~i~iwd~~~~ 335 (368)
|+|++. ++++|+.|| +.+|++.+.
T Consensus 278 ~~~~~~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 278 THPTGRKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp ECTTCGGGCEEEEETTE-EEEEECC--
T ss_pred ECCCCCceEEEEecCCc-eEEEEeccC
Confidence 999885 577776555 888988653
No 31
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-34 Score=255.82 Aligned_cols=248 Identities=14% Similarity=0.207 Sum_probs=203.3
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcc--eEEEcccCCceeEEEEEEeC--CeEEEEecCCCCCC
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREI--FRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQY 153 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~d~~~ 153 (368)
....+|.+.|++++|+|++++|++|+ |+.|+||++...... ....+. .|...+.++.|++ ++..+++++.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~d~~~l~s~~~d--- 80 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-AHDSSIVAIDWASPEYGRIIASASYD--- 80 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-CCSSCEEEEEECCGGGCSEEEEEETT---
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-cCCCcEEEEEEcCCCCCCEEEEEcCC---
Confidence 45578999999999999999999999 888999999865432 334454 7888999999998 47788888877
Q ss_pred CCCcEEEEeCCCC---------cEEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEEEEcCCCeEEEEEe-------
Q 017642 154 PLNKVMIWDDHQS---------RCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLKLLHQIE------- 211 (368)
Q Consensus 154 ~~~~i~vwd~~~~---------~~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~vwd~~~~~~~~~~~------- 211 (368)
+.|++||+.++ +.+..+. |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+.
T Consensus 81 --g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 81 --KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp --SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred --CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccc
Confidence 99999999887 5566676 8999999999999 88777 58999999998876543332
Q ss_pred ------ccCCCeeEEEEecC---CCeEEEEeecCCCCeEEEEecCcce---eeeeeccCcceEEEEECCCC----CEEEE
Q 017642 212 ------TIANPKGLCAVSQG---VGSLVLVCPGLQKGQVRVEHYASKR---TKFIMAHDSRIACFALTQDG----QLLAT 275 (368)
Q Consensus 212 ------~~~~~v~~~~~~~~---~~~~~l~~~g~~dg~i~i~~~~~~~---~~~~~~~~~~i~~v~~sp~g----~~l~s 275 (368)
.+...+.+++|+|+ ++. +++ ++.++.+.+|...... +..+.+|...|++++|+|++ ++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s 235 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEK--LAV-SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT 235 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCE--EEE-EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE
T ss_pred cccccCCcccceeEEEeccCCCCCcE--EEE-ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEE
Confidence 46678899999997 553 333 5578888776555433 55677899999999999998 89999
Q ss_pred EeCCCcEEEEEECCCC----------------------------------------------ceeEeeEeccCcccEEEE
Q 017642 276 SSTKGTLVRIFNTLDG----------------------------------------------TLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 276 ~~~dg~~i~iwd~~~~----------------------------------------------~~~~~~~~~~~~~~v~~l 309 (368)
++.||. |++||++.+ +.+..+.. |...|.++
T Consensus 236 ~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~ 312 (351)
T 3f3f_A 236 GCKDGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGEVWSV 312 (351)
T ss_dssp EETTSC-EEEEEEEECC---------------------------------------CCSEEEEEEEEECT--TSSCEEEE
T ss_pred EcCCCe-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--ccccEEEE
Confidence 999999 999999875 45555555 77899999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 310 AFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 310 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+|+|++++|++++.||.|+|||+.+++..
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred EEcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 99999999999999999999999987653
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.6e-34 Score=271.20 Aligned_cols=235 Identities=20% Similarity=0.338 Sum_probs=208.6
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|+|++|++|+ |+.|++|+... +. ...+. .|...+.+++|++++..+++++.| +.
T Consensus 338 ~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~--~~~~~-~~~~~v~~~~~s~dg~~l~~~~~d-----~~ 408 (577)
T 2ymu_A 338 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QL--LQTLT-GHSSSVRGVAFSPDGQTIASASDD-----KT 408 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-CE--EEEEE-CCSSCEEEEEECTTSSCEEEEETT-----SE
T ss_pred EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-CE--EEEec-CCCCCeEEEEECCCCCEEEEEeCC-----CE
Confidence 34567899999999999999999999 77799999542 22 23444 788889999999999999998887 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
|++|| .+++.+..+. |...|.+++|+|++.+++ .|+.|++||+ +++.+..+..|...+.+++|+|+++. +++
T Consensus 409 v~~~~-~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~--las 484 (577)
T 2ymu_A 409 VKLWN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT--IAS 484 (577)
T ss_dssp EEEEC-TTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCE--EEE
T ss_pred EEEEe-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCE--EEE
Confidence 99999 4677777777 999999999999999888 5899999996 67788888999999999999999985 443
Q ss_pred ecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 234 PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
++.|+.|++|+.+++.+..+.+|...|++++|+|+|++|++++.||. |+|||. +++++..+.+ |.+.|++++|+|
T Consensus 485 -~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~-v~lwd~-~~~~~~~~~~--h~~~v~~~~fs~ 559 (577)
T 2ymu_A 485 -ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVWGVAFSP 559 (577)
T ss_dssp -EETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE-EEEECT-TSCEEEEEEC--CSSCEEEEEECT
T ss_pred -EeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCE-EEEEeC-CCCEEEEEcC--CCCCEEEEEEcC
Confidence 66899999999999999999999999999999999999999999999 999995 7888889987 889999999999
Q ss_pred CCCEEEEEeCCCeEEEEE
Q 017642 314 NAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 314 ~~~~l~s~s~dg~i~iwd 331 (368)
||++|++++.|++|++||
T Consensus 560 dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 560 DGQTIASASSDKTVKLWN 577 (577)
T ss_dssp TSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEeCCCEEEEeC
Confidence 999999999999999997
No 33
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-34 Score=253.91 Aligned_cols=244 Identities=13% Similarity=0.184 Sum_probs=196.9
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|++.+|++|+ |+.|++||+.+++.. ..+. .|...+.++.|++++..+++++.| +.
T Consensus 70 ~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~--~~~~-~h~~~v~~v~~sp~~~~l~s~~~d-----~~ 141 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY--KRFV-GHQSEVYSVAFSPDNRQILSAGAE-----RE 141 (343)
T ss_dssp EEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE--EEEE-CCCSCEEEEEECSSTTEEEEEETT-----SC
T ss_pred chhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE--EEEc-CCCCcEEEEEECCCCCEEEEEcCC-----CE
Confidence 34568999999999999999999999 888999999876654 4454 788899999999999888998888 99
Q ss_pred EEEEeCCCCcEEEEE---ecCCceeEEEEeeCc----------cEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEE
Q 017642 158 VMIWDDHQSRCIGEL---SFRSEVRSVKLRRDR----------IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCA 221 (368)
Q Consensus 158 i~vwd~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 221 (368)
|++||+......... .|...|.+++|+|++ .+++ .|+.|++|| ..++....+..|...+.+++
T Consensus 142 i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 142 IKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEE
Confidence 999998744333222 277889999999986 4555 599999999 45677788889999999999
Q ss_pred EecCCCeEEEEeecCCCCeEEEEec-CcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeE--eeE
Q 017642 222 VSQGVGSLVLVCPGLQKGQVRVEHY-ASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--EVR 298 (368)
Q Consensus 222 ~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~--~~~ 298 (368)
|+|+++. |++ |+.||.|++|+. ..........+...|.+++|+|++.+|+++ .|+. |++||+.+++... .+.
T Consensus 221 ~s~~g~~--l~s-gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~-v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 221 ISPNGKY--IAT-GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQG-VKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp ECTTSSE--EEE-EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSC-EEEEESSSCCSCSEEECC
T ss_pred ECCCCCE--EEE-EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCC-EEEEEeCCCCCCceEEee
Confidence 9999985 443 778999999997 333333333456679999999999887755 5777 9999998876543 333
Q ss_pred e---------ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 299 R---------GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 299 ~---------~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
. ..|...|.+++|+|+|++|++|+.||.|++|+++++.
T Consensus 296 ~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 296 AEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred cCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 1 0266789999999999999999999999999998754
No 34
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-34 Score=255.67 Aligned_cols=247 Identities=15% Similarity=0.160 Sum_probs=204.8
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCC--eEEEEecCCCCCCCC
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN--ILALVGGGPDPQYPL 155 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~d~~~~~ 155 (368)
.....|...|++++|+|++++|++|+ |+.|+||++..........+. .|...+.++.|+++ +..+++++.|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~d----- 78 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYD----- 78 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETT-----
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-CCCCcEEEEEeCCCCCCCEEEEeccC-----
Confidence 45678999999999999999999998 888999999865555556665 78889999999866 7788888887
Q ss_pred CcEEEEeCCCCc--EEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEEEEcCCCe--EEEEEeccCCCeeEEEEec-
Q 017642 156 NKVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQ- 224 (368)
Q Consensus 156 ~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~- 224 (368)
+.|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++++. ....+..|...+.+++|+|
T Consensus 79 g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 999999999987 566666 8899999999999 77777 58999999998773 3445677889999999999
Q ss_pred ------------CCCeEEEEeecCCCCeEEEEecCcc-----eeeeeeccCcceEEEEECCC---CCEEEEEeCCCcEEE
Q 017642 225 ------------GVGSLVLVCPGLQKGQVRVEHYASK-----RTKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVR 284 (368)
Q Consensus 225 ------------~~~~~~l~~~g~~dg~i~i~~~~~~-----~~~~~~~~~~~i~~v~~sp~---g~~l~s~~~dg~~i~ 284 (368)
++.. +++ |+.||.|++|+.... ....+.+|...|.+++|+|+ +++|++++.||. |+
T Consensus 159 ~~~~~~~~~~~~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~ 234 (379)
T 3jrp_A 159 TIEEDGEHNGTKESRK--FVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CI 234 (379)
T ss_dssp C----------CTTCE--EEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EE
T ss_pred cccccccccCCCCCCE--EEE-EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EE
Confidence 4653 443 668999999887542 34567789999999999999 899999999999 99
Q ss_pred EEECCCCc---eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 285 IFNTLDGT---LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 285 iwd~~~~~---~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
|||+.+++ ....+....|...|.+++|+|+|++|++++.||.|++|++..+
T Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 235 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 99999874 2222222236778999999999999999999999999999854
No 35
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-33 Score=255.37 Aligned_cols=248 Identities=13% Similarity=0.170 Sum_probs=203.5
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
..|...|.+++|+|++++|++|+ |+.|++||+.+.+.. ..+. .|...+.++.|+++ .+++++.| +.|++
T Consensus 131 ~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~-~~~~~v~~~~~~~~--~l~~~~~d-----g~i~i 200 (401)
T 4aez_A 131 TDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL--RTMA-GHQARVGCLSWNRH--VLSSGSRS-----GAIHH 200 (401)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEEETT--EEEEEETT-----SEEEE
T ss_pred cCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE--EEec-CCCCceEEEEECCC--EEEEEcCC-----CCEEE
Confidence 34889999999999999999999 888999999876654 4454 78888999999765 45555665 99999
Q ss_pred EeCC-CCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeec
Q 017642 161 WDDH-QSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 161 wd~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
||++ .+..+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+.+++|+|++..+++..+|
T Consensus 201 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 201 HDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC
T ss_pred EecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC
Confidence 9998 456677777 999999999999998888 58999999999999999998999999999999999876654435
Q ss_pred CCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEE--EeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 236 LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLAT--SSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 236 ~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s--~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
+.|+.|++|+...........+...|.+++|+|++++|++ |+.||. |+|||+.+++.........|...|.+++|+|
T Consensus 281 s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 359 (401)
T 4aez_A 281 TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSP 359 (401)
T ss_dssp TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECT
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECC
Confidence 5899999998766444333356778999999999999998 448999 9999999876665543333788999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 314 NAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 314 ~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+|++|++++.||.|++|++.+++....
T Consensus 360 dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 360 DGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp TSSEEEEECTTSEEEEEECCC------
T ss_pred CCCEEEEEeCCCcEEEEECCCCccccc
Confidence 999999999999999999998876643
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.5e-33 Score=246.08 Aligned_cols=237 Identities=11% Similarity=0.193 Sum_probs=209.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
.|...|.+++|+|++++|++++ |+.|++||+...+......+. .+...+.++.|++++..+++++.| +.|++|
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~ 168 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSD-----GNIAVW 168 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETT-----SCEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCC-----CcEEEE
Confidence 6889999999999999999998 788999999887654445554 778889999999999888888877 999999
Q ss_pred eCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCC
Q 017642 162 DDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 162 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
|+++++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+. +...+.+++|+|+++.+ ++ ++.
T Consensus 169 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l--~~-~~~ 244 (337)
T 1gxr_A 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWL--AV-GME 244 (337)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEE--EE-EET
T ss_pred eCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEE--EE-EcC
Confidence 999999999988 899999999999998887 58999999999999888774 67789999999999853 33 567
Q ss_pred CCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCE
Q 017642 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQW 317 (368)
Q Consensus 238 dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 317 (368)
++.|++|+........+..|...|.+++|+|++++|++++.||. |++||+.+++.+.... |...|.+++|+|++++
T Consensus 245 ~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 245 SSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSK---ESSSVLSCDISVDDKY 320 (337)
T ss_dssp TSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE---CSSCEEEEEECTTSCE
T ss_pred CCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEec---CCCcEEEEEECCCCCE
Confidence 99999999888777788899999999999999999999999999 9999999998885544 6778999999999999
Q ss_pred EEEEeCCCeEEEEEcc
Q 017642 318 LAVSSDKGTVHVFNLK 333 (368)
Q Consensus 318 l~s~s~dg~i~iwd~~ 333 (368)
|++++.||.|++|++.
T Consensus 321 l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 321 IVTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEEETTSCEEEEEEE
T ss_pred EEEecCCCeEEEEEEe
Confidence 9999999999999974
No 37
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=5.6e-34 Score=271.66 Aligned_cols=242 Identities=14% Similarity=0.178 Sum_probs=205.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEe
Q 017642 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
.+.+.+.+++|+|||++|+++.++.|+||++.+.+.. ..+. +|...+.+++|+|++.++++++.| ++|+|||
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~--~~~~-~h~~~v~~~~~spdg~~lasg~~d-----~~v~lWd 87 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDT--EIYT-EHSHQTTVAKTSPSGYYCASGDVH-----GNVRIWD 87 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCC--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEE
T ss_pred cccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccC--eEec-CCCCceEEEEECCCCcEEEEEeCC-----CCEEEeE
Confidence 3456778899999999999999889999999765554 4454 788899999999999999999988 9999999
Q ss_pred CCCCc--EEEEEe-cCCceeEEEEeeCccEEE--eC-----CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEE
Q 017642 163 DHQSR--CIGELS-FRSEVRSVKLRRDRIIVV--LE-----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 163 ~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~--~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 232 (368)
+.+++ ....+. |.+.|.+++|+|+++.++ .+ +.|++|| .++....+.+|...|.+++|+|++... ++
T Consensus 88 ~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~-l~ 164 (611)
T 1nr0_A 88 TTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFR-II 164 (611)
T ss_dssp SSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCE-EE
T ss_pred CCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeE-EE
Confidence 87543 445566 899999999999999888 22 3677777 566677788999999999999998753 33
Q ss_pred eecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec-----cCcccE
Q 017642 233 CPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-----ADRAEI 306 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-----~~~~~v 306 (368)
+|+.|+.|++|+... +....+.+|...|.+++|+|+|++|++++.|+. |+|||+.+++.+..+... .|.+.|
T Consensus 165 -s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~-i~lwd~~~g~~~~~~~~~~~~~~~h~~~V 242 (611)
T 1nr0_A 165 -SGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGT-IVLYNGVDGTKTGVFEDDSLKNVAHSGSV 242 (611)
T ss_dssp -EEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCCEEEECBCTTSSSCSSSSCE
T ss_pred -EEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCc-EEEEECCCCcEeeeeccccccccccCCCE
Confidence 377899999998654 556678899999999999999999999999999 999999999988877421 278899
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 307 ~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
.+++|+|+|++|++++.|++|+|||+.+++.
T Consensus 243 ~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 243 FGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 9999999999999999999999999987654
No 38
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=245.77 Aligned_cols=239 Identities=13% Similarity=0.138 Sum_probs=202.2
Q ss_pred EEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCc
Q 017642 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (368)
Q Consensus 88 v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~ 167 (368)
+++|+||+++ +||+|.|+.|+|||+++++......+. .|...|.++.|++++..+++++.| +.|++||+++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~-~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~ 100 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQK 100 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEec-CCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCce
Confidence 4679999886 889888999999999988776554553 788889999999999999999988 999999999887
Q ss_pred EEEEEe------------------------------------------cCCceeEEEEeeCccEEE---eCCcEEEEEcC
Q 017642 168 CIGELS------------------------------------------FRSEVRSVKLRRDRIIVV---LEQKIFVYNFA 202 (368)
Q Consensus 168 ~~~~~~------------------------------------------~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~ 202 (368)
++..+. |...+..+.+.+++.+++ .|+.|++||++
T Consensus 101 ~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred eEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 665543 345566777778877777 58999999998
Q ss_pred CCeE----EEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe-
Q 017642 203 DLKL----LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS- 277 (368)
Q Consensus 203 ~~~~----~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~- 277 (368)
+++. ......+...+..+.+++++..++...+|+.++.|++|+...........+...+..+.|++++..+++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEEC
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEE
Confidence 7653 34455677889999999998887766678899999999988877777778888999999999999777654
Q ss_pred -CCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 278 -TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 278 -~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
.|+. |+|||+.+++++.++.+ |.+.|++|+|+|||++|++|+.||+|+|||+.+..
T Consensus 261 ~~d~~-i~iwd~~~~~~~~~l~g--H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 261 FAQNQ-LVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTTCC-EEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred cCCCE-EEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 7899 99999999999999988 88999999999999999999999999999997653
No 39
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.9e-33 Score=254.09 Aligned_cols=246 Identities=13% Similarity=0.167 Sum_probs=205.9
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
..|...|++|+|+|+|++|++|+ |+.|+|||+++++.. ..+. .|...+.++.+++. .+++++.| +.+++
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~--~~~~-~h~~~v~~~s~~~~--~l~sgs~d-----~~i~~ 213 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMT-SHSARVGSLSWNSY--ILSSGSRS-----GHIHH 213 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEETT--EEEEEETT-----SEEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE--EEEe-CCCCceEEEeeCCC--EEEEEeCC-----CceeE
Confidence 46778899999999999999999 888999999876655 4454 78888888888765 45666666 99999
Q ss_pred EeCCCC-cEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCe----EEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 161 WDDHQS-RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK----LLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 161 wd~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
||.... ..+..+. |...+..+.+++++.+++ .|+.|++||+.+++ .+.....+...|.+++|+|++..++.
T Consensus 214 ~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 214 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred eeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 998765 4556666 999999999999999888 58999999998764 34566778899999999999988776
Q ss_pred EeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe--CCCcEEEEEECCCCceeEeeEeccCcccEEEE
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS--TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (368)
..+|+.|+.|++|+...........+...+.++.|+++++.|++++ .|+. |+|||+.+++++.++.+ |.+.|++|
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~g--H~~~V~~l 370 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLSL 370 (420)
T ss_dssp EEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEEE
T ss_pred EEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcC--CCCCEEEE
Confidence 6668899999999887655544444556789999999999887765 7899 99999999999999988 88999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 310 AFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 310 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+|+|||++|++|+.|++|+|||+.+..+...
T Consensus 371 ~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 371 TMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 9999999999999999999999987655443
No 40
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-33 Score=247.90 Aligned_cols=247 Identities=10% Similarity=0.155 Sum_probs=206.5
Q ss_pred CcccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCC
Q 017642 77 AESTSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (368)
Q Consensus 77 ~~~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~ 155 (368)
.......|...|++++|+|+|++|++|+ |+.|++||+.+.+.. ..+. .|...+.++.|++++..+++++.|
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~~~d----- 95 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL--GTLD-GHTGTIWSIDVDCFTKYCVTGSAD----- 95 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhh--hhhh-hcCCcEEEEEEcCCCCEEEEEeCC-----
Confidence 3445678999999999999999999998 788999998876655 4554 788899999999999888888887
Q ss_pred CcEEEEeCCCCcEEEEEecCC-----------------------------------------------------------
Q 017642 156 NKVMIWDDHQSRCIGELSFRS----------------------------------------------------------- 176 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~----------------------------------------------------------- 176 (368)
+.|++||+.+++.+..+.+..
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred CeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 999999999887776665444
Q ss_pred -ceeEEEEeeCccEEE---eCCcEEEEEcCC-CeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCccee
Q 017642 177 -EVRSVKLRRDRIIVV---LEQKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (368)
Q Consensus 177 -~v~~~~~~~~~~~l~---~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~ 251 (368)
.+.+++|++++.+++ .|+.|++||+++ ++.+..+..|...+.+++|+++++.+ ++ ++.|+.|++|+......
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~-~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYF--IT-SSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEE--EE-EETTSEEEEEETTTCCE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEE--EE-ecCCceEEEEECCCCce
Confidence 445555555555555 478899999988 78888888899999999999999853 33 56899999998776544
Q ss_pred eeeeccCcceEEEEECCCCCEEEEEeCCC--------------cEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCE
Q 017642 252 KFIMAHDSRIACFALTQDGQLLATSSTKG--------------TLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQW 317 (368)
Q Consensus 252 ~~~~~~~~~i~~v~~sp~g~~l~s~~~dg--------------~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~ 317 (368)
.....+...+.+++|+|+++++++++.++ . |++||+.+++.+..+.. |...|.+++|+|++++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 253 LKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE-ARFYHKIFEEEIGRVQG--HFGPLNTVAISPQGTS 329 (369)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE-EEEEETTTCCEEEEEEC--CSSCEEEEEECTTSSE
T ss_pred eeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce-eEEEecCCCcchhheec--ccCcEEEEEECCCCCE
Confidence 44444788999999999999999999988 7 99999999999999987 7889999999999999
Q ss_pred EEEEeCCCeEEEEEccCCCC
Q 017642 318 LAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 318 l~s~s~dg~i~iwd~~~~~~ 337 (368)
|++++.||.|+||+++++..
T Consensus 330 l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 330 YASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEEEETTSEEEEEEECHHHH
T ss_pred EEEEcCCCeEEEEECccccc
Confidence 99999999999999987543
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2e-33 Score=251.21 Aligned_cols=242 Identities=12% Similarity=0.086 Sum_probs=207.5
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcE
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (368)
....|...|++++|+|++++|++++ |+.|++|++++.+......+. .|...+.++.|++++..+++++.| +.|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~~~~~d-----g~i 76 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-EHNGQVTGVDWAPDSNRIVTCGTD-----RNA 76 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-CCSSCEEEEEEETTTTEEEEEETT-----SCE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-CCCCcccEEEEeCCCCEEEEEcCC-----CeE
Confidence 3456899999999999999999997 888999999877633445564 788899999999999888888887 999
Q ss_pred EEEeCCCCcEEEEEe---cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeE---EEEE-eccCCCeeEEEEecCCCe
Q 017642 159 MIWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKL---LHQI-ETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 159 ~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~ 228 (368)
++||+.+++....+. |...|.+++|++++.+++ .|+.|++||++.++. ...+ ..|...+.+++|+++++.
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 156 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSE
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCE
Confidence 999999887655543 888999999999998888 589999999987652 3333 567889999999999874
Q ss_pred EEEEeecCCCCeEEEEec-------------------CcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECC
Q 017642 229 LVLVCPGLQKGQVRVEHY-------------------ASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~-------------------~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (368)
+++ |+.||.|++|+. ....+..+..|...|.+++|+|++++|++++.||. |++||++
T Consensus 157 --l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~ 232 (372)
T 1k8k_C 157 --LAA-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADAD 232 (372)
T ss_dssp --EEE-EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGG
T ss_pred --EEE-EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECC
Confidence 343 668999999984 24666777889999999999999999999999999 9999999
Q ss_pred CCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
+++.+..+.. |...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 233 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 233 KKMAVATLAS--ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GTTEEEEEEC--SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCceeEEEcc--CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 9999999987 77899999999999988887 899999999988
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.4e-33 Score=243.61 Aligned_cols=245 Identities=13% Similarity=0.167 Sum_probs=208.5
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcc---eEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREI---FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
...|...|++++|+|++++|++++|+.|++|++...+.. ..... ..+...+.++.|++++..+++++.| +.
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d-----~~ 120 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDC-LNRDNYIRSCKLLPDGCTLIVGGEA-----ST 120 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEEC-SCTTSBEEEEEECTTSSEEEEEESS-----SE
T ss_pred eccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccc-cCCCCcEEEEEEcCCCCEEEEEcCC-----Cc
Confidence 347999999999999999999999888999999865432 11122 2577889999999999888888877 99
Q ss_pred EEEEeCCCCc--EEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 158 VMIWDDHQSR--CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 158 i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
|++||+.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+.+++|+++++. +
T Consensus 121 i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~--l 198 (337)
T 1gxr_A 121 LSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK--L 198 (337)
T ss_dssp EEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE--E
T ss_pred EEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCE--E
Confidence 9999999887 455555 888999999999998877 5899999999999999999999999999999999975 3
Q ss_pred EeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEE
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF 311 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 311 (368)
++ ++.||.|++|+...........+...+.+++|+|++++|++++.++. |++||+.+++.. .+.. |...|.+++|
T Consensus 199 ~~-~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~-~~~~--~~~~v~~~~~ 273 (337)
T 1gxr_A 199 WT-GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKY-QLHL--HESCVLSLKF 273 (337)
T ss_dssp EE-EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEE-EECC--CSSCEEEEEE
T ss_pred EE-EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeE-EEcC--CccceeEEEE
Confidence 33 56899999999876555555568889999999999999999999999 999999988765 4444 7889999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 312 SSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 312 sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+|++++|++++.||.|++||+.+++..
T Consensus 274 ~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 274 AYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 999999999999999999999887654
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-32 Score=240.39 Aligned_cols=241 Identities=17% Similarity=0.265 Sum_probs=204.7
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|++++|++|+ |+.|++||+.+.+.. ..+. .|...+.++.|++++..+++++.| +.
T Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~s~~~d-----~~ 130 (312)
T 4ery_A 59 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL--KTLK-GHSNYVFCCNFNPQSNLIVSGSFD-----ES 130 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE--EEEE-CCSSCEEEEEECSSSSEEEEEETT-----SC
T ss_pred hhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE--EEEc-CCCCCEEEEEEcCCCCEEEEEeCC-----Cc
Confidence 34567999999999999999999999 888999999876654 4454 788889999999999999999888 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEe-ccCCCeeEEEEecCCCeEEEE
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~ 232 (368)
|++||+++++.+..+. |...|.+++|++++.+++ .|+.|++||+++++.+..+. .+...+..++|+|+++. ++
T Consensus 131 i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~ 208 (312)
T 4ery_A 131 VRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY--IL 208 (312)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE--EE
T ss_pred EEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE--EE
Confidence 9999999999999888 889999999999998887 59999999999998877764 45567889999999985 33
Q ss_pred eecCCCCeEEEEecCc-ceeeeeeccCcceE---EEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 233 CPGLQKGQVRVEHYAS-KRTKFIMAHDSRIA---CFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~---~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
+ ++.|+.|++|+... +.+..+.+|...+. .....+++.+|++|+.||. |++||+.+++.+..+.+ |...|.+
T Consensus 209 ~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~--h~~~v~~ 284 (312)
T 4ery_A 209 A-ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQTKEIVQKLQG--HTDVVIS 284 (312)
T ss_dssp E-EETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred E-EcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE-EEEEECCCchhhhhhhc--cCCcEEE
Confidence 3 56899999988765 45566777765432 2333467889999999999 99999999999999987 7889999
Q ss_pred EEEecCCCEEEEEe--CCCeEEEEEcc
Q 017642 309 LAFSSNAQWLAVSS--DKGTVHVFNLK 333 (368)
Q Consensus 309 l~~sp~~~~l~s~s--~dg~i~iwd~~ 333 (368)
++|+|++.+|++++ .|++|++|+.+
T Consensus 285 ~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 285 TACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999987 69999999864
No 44
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.8e-34 Score=262.85 Aligned_cols=247 Identities=13% Similarity=0.103 Sum_probs=191.8
Q ss_pred ccCCCCCEEEEEEcC-CCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCc
Q 017642 81 SSSPPPTLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNK 157 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~ 157 (368)
...|...|+||+|+| ++.+||+|+ |+.|+|||+...+......+. +|...|.++.|+| ++..|++++.| ++
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~-gH~~~V~~l~f~p~~~~~l~s~s~D-----~~ 188 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI-GAGGSITGLKFNPLNTNQFYASSME-----GT 188 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC-SSSCCCCEEEECSSCTTEEEEECSS-----SC
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc-CCCCCEEEEEEeCCCCCEEEEEeCC-----CE
Confidence 456888999999999 567899999 888999999877766555554 7888999999997 57788888888 99
Q ss_pred EEEEeCCCCcEEEEEe---cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 158 VMIWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
|++||++++....... +...+.+++|++++.+++ .||.|++||++ ++.+..+..|...|.+++|+|+++.++
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~- 266 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFL- 266 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEE-
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEE-
Confidence 9999998765443333 344678999999999888 58999999986 456677888999999999999988643
Q ss_pred EeecCCCCeEEEEecCcce----eeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE---------
Q 017642 232 VCPGLQKGQVRVEHYASKR----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR--------- 298 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~----~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~--------- 298 (368)
+ +|+.|+.|++|+..... .....+|...|++++|+|+|++|++++.||. |+|||+.+++....+.
T Consensus 267 ~-s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 267 A-TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp E-EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCSS
T ss_pred E-EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEeccccccccc
Confidence 3 36789999999876422 2334679999999999999999999999999 9999987643221110
Q ss_pred --------------------------------------------------eccCcccEEEE-EEecCCCEEEEEeCCCeE
Q 017642 299 --------------------------------------------------RGADRAEIYSL-AFSSNAQWLAVSSDKGTV 327 (368)
Q Consensus 299 --------------------------------------------------~~~~~~~v~~l-~~sp~~~~l~s~s~dg~i 327 (368)
...|...|.++ +|+|+|++|++|+ |++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i 423 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHI 423 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEE
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcE
Confidence 01134456666 6999999999876 7899
Q ss_pred EEEEccCCCCC
Q 017642 328 HVFNLKVNSGS 338 (368)
Q Consensus 328 ~iwd~~~~~~~ 338 (368)
+||++++++..
T Consensus 424 ~iW~~~~gk~r 434 (435)
T 4e54_B 424 LIWSQQEARTR 434 (435)
T ss_dssp EECCCC-----
T ss_pred EEEECCcCeee
Confidence 99999988764
No 45
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=249.31 Aligned_cols=255 Identities=13% Similarity=0.139 Sum_probs=205.8
Q ss_pred ccccCCCCCEEEEEEcC-CCCEEEEEe-CCeEEEEEecCCCcceEEEcc----------cCCceeEEEEEEeC-CeEEEE
Q 017642 79 STSSSPPPTLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFREIFRRDFE----------RGGGIGVVEMLFRC-NILALV 145 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~-~~~~~~ 145 (368)
.....|.+.|++++|+| ++++|++|+ |+.|++|++............ ..|...+.++.|++ +...++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 34567999999999999 999999999 888999999876654332211 14788899999998 666777
Q ss_pred ecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCc---cEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeE
Q 017642 146 GGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR---IIVV---LEQKIFVYNFADLKLLHQIETIANPKGL 219 (368)
Q Consensus 146 s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 219 (368)
+++.| +.|++||+.+++.+..+.+...+.++.+.+.+ .+++ .|+.|++||+++++.+..+..|...+.+
T Consensus 117 s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 117 SSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp EEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred EEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 77776 99999999999999999999999999999854 3666 5899999999999999999999999999
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCcc--eeeee---------------eccCcceEEEEECCCCCEEEEEeCCCcE
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASK--RTKFI---------------MAHDSRIACFALTQDGQLLATSSTKGTL 282 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~--~~~~~---------------~~~~~~i~~v~~sp~g~~l~s~~~dg~~ 282 (368)
++|+|+++.+++ +|+.||.|++|+.... ....+ ..|...|.+++|+|++++|++++.||.
T Consensus 192 ~~~~~~~~~ll~--~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~- 268 (408)
T 4a11_B 192 VSWSPRYDYILA--TASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR- 268 (408)
T ss_dssp EEECSSCTTEEE--EEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC-
T ss_pred EEECCCCCcEEE--EEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe-
Confidence 999999986333 3668999999987542 22222 578899999999999999999999999
Q ss_pred EEEEECCCCc-----------------------------------------------eeEeeEeccCcccEEEEEEecCC
Q 017642 283 VRIFNTLDGT-----------------------------------------------LLQEVRRGADRAEIYSLAFSSNA 315 (368)
Q Consensus 283 i~iwd~~~~~-----------------------------------------------~~~~~~~~~~~~~v~~l~~sp~~ 315 (368)
|++||+.+++ .+..+.. |...|.+++|+|++
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSNF 346 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETTT
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCCC
Confidence 9999987654 3333444 77899999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCCCCCCCC
Q 017642 316 QWLAVSSDKGTVHVFNLKVNSGSARSEP 343 (368)
Q Consensus 316 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~ 343 (368)
++|++++.||.|++||+++.+..+....
T Consensus 347 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp TEEEEEETTSCEEEEEECC---------
T ss_pred CEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 9999999999999999999887765443
No 46
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.7e-33 Score=262.08 Aligned_cols=236 Identities=21% Similarity=0.330 Sum_probs=209.4
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|++++|++++ |+.|++||++.... ..+. .+...+.++++++++..+++++.| +.
T Consensus 297 ~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~---~~~~-~~~~~v~~~~~s~~g~~l~~~~~d-----g~ 367 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL---QTLT-GHSSSVWGVAFSPDGQTIASASDD-----KT 367 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE---EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee---EEEe-CCCCCEEEEEECCCCCEEEEEeCC-----CE
Confidence 34567999999999999999999998 77899999764322 3343 678889999999999999998887 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
|++|| .+++.+..+. |...|.+++|+|++++++ .|+.|++||. +++.+..+..|...+.+++|+|+++. +++
T Consensus 368 v~~~~-~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~--l~~ 443 (577)
T 2ymu_A 368 VKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQT--IAS 443 (577)
T ss_dssp EEEEE-TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSE--EEE
T ss_pred EEEEc-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCE--EEE
Confidence 99999 4677777877 999999999999999888 5899999995 67788889999999999999999985 343
Q ss_pred ecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 234 PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
++.|+.|++|+.+++.+..+.+|...|++++|+|++++|++++.|+. |+||| .+++.+..+.+ |...|++++|+|
T Consensus 444 -~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~-~~~~~~~~~~~--h~~~v~~l~~s~ 518 (577)
T 2ymu_A 444 -ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWN-RNGQLLQTLTG--HSSSVRGVAFSP 518 (577)
T ss_dssp -EETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEE-TTSCEEEEEEC--CSSCEEEEEECT
T ss_pred -EcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEc-CCCCEEEEEeC--CCCCEEEEEEcC
Confidence 66899999999999999999999999999999999999999999999 99999 47888888887 788999999999
Q ss_pred CCCEEEEEeCCCeEEEEEc
Q 017642 314 NAQWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 314 ~~~~l~s~s~dg~i~iwd~ 332 (368)
||++|++++.||.|+|||+
T Consensus 519 dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 519 DGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp TSSCEEEEETTSEEEEECT
T ss_pred CCCEEEEEECcCEEEEEeC
Confidence 9999999999999999996
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3e-32 Score=245.07 Aligned_cols=244 Identities=14% Similarity=0.140 Sum_probs=197.2
Q ss_pred ccccCCCCCEEEEEEcCCC-CEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCC
Q 017642 79 STSSSPPPTLLHISFNQDH-GCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPL 155 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g-~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~ 155 (368)
.....|...|++++|+|++ ++|++|+ |+.|+|||+...+......+. +|...+.++.|++ ++..+++++.|
T Consensus 67 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d----- 140 (383)
T 3ei3_B 67 RTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGM-GPGDAITGMKFNQFNTNQLFVSSIR----- 140 (383)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCC-STTCBEEEEEEETTEEEEEEEEETT-----
T ss_pred EeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecC-CcCCceeEEEeCCCCCCEEEEEeCC-----
Confidence 3456899999999999999 8999999 888999999877666444432 6889999999999 67888888887
Q ss_pred CcEEEEeCCCCcEEEEEe----cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCe
Q 017642 156 NKVMIWDDHQSRCIGELS----FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (368)
+.|++||+.. +.+..+. +...|.+++|+|++.+++ .|+.|++||+ +++.+..+..|...+.+++|+|+++.
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCC
Confidence 9999999986 4555554 347899999999999888 5899999999 57788889999999999999999985
Q ss_pred EEEEeecCCCCeEEEEecCc----ceeeeeeccCcceEEEEECC-CCCEEEEEeCCCcEEEEEECCCCce----------
Q 017642 229 LVLVCPGLQKGQVRVEHYAS----KRTKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTL---------- 293 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~----~~~~~~~~~~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~---------- 293 (368)
++ + +|+.|+.|++|+... ........|...|.+++|+| ++++|++++.|+. |+|||+++++.
T Consensus 219 ~l-~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 219 LM-A-TSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp EE-E-EEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCBC
T ss_pred EE-E-EEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCcccccccccccc
Confidence 33 3 366899999998875 33333347999999999999 9999999998888 88888754432
Q ss_pred -----------------------------------------------eEeeEeccCcccEEEEEEecCCCEEEEEeCCCe
Q 017642 294 -----------------------------------------------LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGT 326 (368)
Q Consensus 294 -----------------------------------------------~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~ 326 (368)
+..+..+.+...+..++|+|++++|++++ ||.
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~ 374 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFN 374 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTE
T ss_pred ccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCc
Confidence 22333222445677789999999999997 999
Q ss_pred EEEEEccC
Q 017642 327 VHVFNLKV 334 (368)
Q Consensus 327 i~iwd~~~ 334 (368)
|+|||+++
T Consensus 375 i~iw~~~~ 382 (383)
T 3ei3_B 375 ILIWNRED 382 (383)
T ss_dssp EEEEECC-
T ss_pred EEEEecCC
Confidence 99999975
No 48
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.1e-35 Score=261.15 Aligned_cols=241 Identities=12% Similarity=0.083 Sum_probs=194.3
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcE
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (368)
....|.+.|++++|+|+|++|++|+ |+.|+||++.+........+. .|...+.++.|++++..+++++.| +.|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~d-----~~v 79 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-DHDKIVTCVDWAPKSNRIVTCSQD-----RNA 79 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-CCSSCEEEEEECTTTCCEEEEETT-----SSE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-cCCceEEEEEEeCCCCEEEEEeCC-----CeE
Confidence 4455778999999999999999997 888999999876323334554 788899999999999889998887 999
Q ss_pred EEEeCCCCc---EEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCe---EEEEEec-cCCCeeEEEEecCCC
Q 017642 159 MIWDDHQSR---CIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK---LLHQIET-IANPKGLCAVSQGVG 227 (368)
Q Consensus 159 ~vwd~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~ 227 (368)
++||+.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++ ....+.. |...+.+++|+|+++
T Consensus 80 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 80 YVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp EEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS
T ss_pred EEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC
Confidence 999999877 555555 999999999999998777 58999999998877 3677777 899999999999987
Q ss_pred eEEEEeecCCCCeEEEEecC-------------------cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 228 SLVLVCPGLQKGQVRVEHYA-------------------SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~-------------------~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
. +++ |+.|+.|++|+.. ...+..+ .|...|.+++|+|++++|++++.||. |+|||+
T Consensus 160 ~--l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~ 234 (377)
T 3dwl_C 160 L--LAA-GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYP 234 (377)
T ss_dssp E--EEE-EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEE
T ss_pred E--EEE-EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEEC
Confidence 4 443 6689999999874 3445556 89999999999999999999999999 999999
Q ss_pred CCCce----eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 289 LDGTL----LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 289 ~~~~~----~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
.+++. +..+.. |...|.+++|+|++++|++++.++.+ +|+...
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 235 SAPEQPPRALITVKL--SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp CSTTSCEEECCCEEC--SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred CCCCCcceeeEeecC--CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 99987 777777 78899999999999999998877655 777653
No 49
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.6e-33 Score=267.47 Aligned_cols=247 Identities=17% Similarity=0.237 Sum_probs=208.3
Q ss_pred cccCCCCCEEEEEEcCCC-CEEEEEe-CCeEEEEEecCCCc---ceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDH-GCFAAGT-DHGFRIYNCDPFRE---IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYP 154 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g-~~l~~~~-d~~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~ 154 (368)
....|.+.|++++|++++ ++|++|+ |+.|+||++..... .....+. +|...+.++.|++++..+++++.|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s~~g~~l~sgs~D---- 451 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-GHSHFVEDVVLSSDGQFALSGSWD---- 451 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-CCSSCEEEEEECTTSSEEEEEETT----
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec-CCCCcEEEEEECCCCCEEEEEeCC----
Confidence 456899999999999875 7899998 88899999976432 2234454 888999999999999999999988
Q ss_pred CCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEE---eccCCCeeEEEEecCCC
Q 017642 155 LNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQI---ETIANPKGLCAVSQGVG 227 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~---~~~~~~v~~~~~~~~~~ 227 (368)
+.|++||+.+++.+..+. |...|.+++|+|++.+++ .|++|++||+......... .+|...|.+++|++++.
T Consensus 452 -g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 452 -GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred -CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 999999999999999888 999999999999998887 5999999998655443332 35777899999999985
Q ss_pred eEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccE
Q 017642 228 SLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEI 306 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (368)
...+++ |+.|+.|++|+... +....+.+|...|++++|+|+|++|++|+.||. |+|||+.+++.+..+.. ...|
T Consensus 531 ~~~l~s-~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~~---~~~v 605 (694)
T 3dm0_A 531 QPTIVS-ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEA---NSVI 605 (694)
T ss_dssp SCEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCBC---SSCE
T ss_pred cceEEE-EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEecC---CCcE
Confidence 434554 77899999998765 555678899999999999999999999999999 99999999998887764 4679
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 307 ~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
.+++|+|++.+|++++ |+.|+|||+++++..
T Consensus 606 ~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 606 HALCFSPNRYWLCAAT-EHGIKIWDLESKSIV 636 (694)
T ss_dssp EEEEECSSSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEEEcCCCcEEEEEc-CCCEEEEECCCCCCh
Confidence 9999999999888776 566999999887543
No 50
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=9e-34 Score=252.72 Aligned_cols=238 Identities=13% Similarity=0.155 Sum_probs=199.5
Q ss_pred CCCCCEEEEEEcCC----CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCC
Q 017642 83 SPPPTLLHISFNQD----HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLN 156 (368)
Q Consensus 83 ~h~~~v~~~~~s~~----g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~ 156 (368)
.|...|++++|+|+ |++|++|+ |+.|++||+.+.+.. ..+. .|...+.++.|++ ++..+++++.| +
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~--~~~~-~~~~~i~~~~~~~~~~~~l~s~~~d-----g 138 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI--KHYV-GHGNAINELKFHPRDPNLLLSVSKD-----H 138 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEE--EEEE-SCCSCEEEEEECSSCTTEEEEEETT-----S
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEe--eeec-CCCCcEEEEEECCCCCCEEEEEeCC-----C
Confidence 47789999999999 67899988 888999999876654 4454 7888999999999 88888888887 9
Q ss_pred cEEEEeCCCCcEEEEE---e-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEec-----------------
Q 017642 157 KVMIWDDHQSRCIGEL---S-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIET----------------- 212 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~---~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~----------------- 212 (368)
.|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++....+..
T Consensus 139 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred eEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 9999999999999988 4 899999999999998887 589999999988765443332
Q ss_pred -----------cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc---------------eeeeeeccCcceEEEEE
Q 017642 213 -----------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---------------RTKFIMAHDSRIACFAL 266 (368)
Q Consensus 213 -----------~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---------------~~~~~~~~~~~i~~v~~ 266 (368)
|...+.+++|+ ++ ++++ ++.|+.|++|+.... .+..+..|...|.+++|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~--~~--~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWL--GD--LILS-KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRF 293 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEE--TT--EEEE-ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCC
T ss_pred eccCccccccCCcceEEEEEEc--CC--EEEE-EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEE
Confidence 88899999998 44 3443 678999999886542 35567789999999999
Q ss_pred CCC--CCEEEEEeCCCcEEEEEECCCCcee----EeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 267 TQD--GQLLATSSTKGTLVRIFNTLDGTLL----QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 267 sp~--g~~l~s~~~dg~~i~iwd~~~~~~~----~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
+|+ +++|++++.||. |++||+.+++.. ..+..+.|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 294 s~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 294 SMDFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EECTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cCCCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 999 999999999999 999999987643 3666633478999999999999999999999999999864
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.1e-33 Score=250.49 Aligned_cols=245 Identities=13% Similarity=0.169 Sum_probs=204.7
Q ss_pred ccccCCCCCEEEEEEcCC----C---CEEEEEe-CCeEEEEEecCCCcc---eEEEcccCC-----ceeEEEEEEe----
Q 017642 79 STSSSPPPTLLHISFNQD----H---GCFAAGT-DHGFRIYNCDPFREI---FRRDFERGG-----GIGVVEMLFR---- 138 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~----g---~~l~~~~-d~~i~iw~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~---- 138 (368)
.....|...|++++|+|+ | ++|++++ |+.|++|++...+.. ....+. .+ ...+.++.|+
T Consensus 56 ~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 56 YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD-LLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp EEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC-CSCTTGGGSCEEEEEEECCC-
T ss_pred eEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec-ccccccCCCcEEEEEEeeccC
Confidence 344589999999999999 9 9999998 888999999876641 023343 45 5889999999
Q ss_pred CCeEE-EEecCCCCCCCCCcEEEEeCCC------CcEEE-----EE-------e-cCCceeEEEEeeCccEEE---eCCc
Q 017642 139 CNILA-LVGGGPDPQYPLNKVMIWDDHQ------SRCIG-----EL-------S-FRSEVRSVKLRRDRIIVV---LEQK 195 (368)
Q Consensus 139 ~~~~~-~~s~~~d~~~~~~~i~vwd~~~------~~~~~-----~~-------~-~~~~v~~~~~~~~~~~l~---~d~~ 195 (368)
+++.. +++++.| +.|++||+.+ ++.+. .+ . |...|.+++|+|++ +++ .|+.
T Consensus 135 ~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~ 208 (397)
T 1sq9_A 135 RLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGT 208 (397)
T ss_dssp ---CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSE
T ss_pred CCCceEEEEEeCC-----CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCc
Confidence 88888 8888877 9999999988 65544 55 2 68899999999999 666 5899
Q ss_pred EEEEEcCCCeEEEEEec---c---CCCeeEEEEecCCCeEEEEeecCCC---CeEEEEecC-cceeeeeec---------
Q 017642 196 IFVYNFADLKLLHQIET---I---ANPKGLCAVSQGVGSLVLVCPGLQK---GQVRVEHYA-SKRTKFIMA--------- 256 (368)
Q Consensus 196 i~vwd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~l~~~g~~d---g~i~i~~~~-~~~~~~~~~--------- 256 (368)
|++||+++++.+..+.. | ...+.+++|+++++. +++ ++.| |.|++|+.. .+.+..+..
T Consensus 209 i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~--l~~-~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~ 285 (397)
T 1sq9_A 209 VQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL--LAI-AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASL 285 (397)
T ss_dssp EEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTE--EEE-EEEETTEEEEEEEETTTCCEEEEECBC--------
T ss_pred EEEEECCCCceeEEEeccccccccCCccceEEECCCCCE--EEE-EecCCCCceEEEEECCCCcccceeccCcccccccc
Confidence 99999999999999988 8 899999999999885 333 5578 999998865 466677777
Q ss_pred ----cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE------eccC---------------cccEEEEEE
Q 017642 257 ----HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR------RGAD---------------RAEIYSLAF 311 (368)
Q Consensus 257 ----~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~------~~~~---------------~~~v~~l~~ 311 (368)
|...|.+++|+|++++|++++.||. |+|||+.+++.+..+. . | ...|.+++|
T Consensus 286 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~v~~~~~ 362 (397)
T 1sq9_A 286 GEFAHSSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLNMHCDDIE--IEEDILAVDEHGDSLAEPGVFDVKF 362 (397)
T ss_dssp CCBSBSSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEECCGGGCS--SGGGCCCBCTTSCBCSSCCEEEEEE
T ss_pred cccccCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEecccCccc--chhhhhccccccccccCCceeEEEe
Confidence 9999999999999999999999999 9999999999999988 5 5 789999999
Q ss_pred ecCC----------CEEEEEeCCCeEEEEEccCCC
Q 017642 312 SSNA----------QWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 312 sp~~----------~~l~s~s~dg~i~iwd~~~~~ 336 (368)
+|++ ++|++++.||.|++|++++++
T Consensus 363 ~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 363 LKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp ECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 9998 799999999999999998864
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-33 Score=253.88 Aligned_cols=248 Identities=13% Similarity=0.162 Sum_probs=209.9
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCC--CcceEEEcccCCceeEEEEEEeCC-eEEEEecCCCCCCCCCc
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPF--REIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNK 157 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~~~~~~ 157 (368)
..|...|++++|+|++++|++|+ |+.|++|++... .......+. .|...+.++.|+++ +..+++++.| +.
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d-----g~ 137 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS-NHSSSVKTVKFNAKQDNVLASGGNN-----GE 137 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC-CSSSCCCEEEECSSSTTBEEEECSS-----SC
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc-CCccceEEEEEcCCCCCEEEEEcCC-----Ce
Confidence 35788999999999999999998 788999999862 122334554 78888999999987 7788888887 99
Q ss_pred EEEEeCCCCc------EEEEE---e-cCCceeEEEEeeC-ccEEE---eCCcEEEEEcCCCeEEEEEecc------CCCe
Q 017642 158 VMIWDDHQSR------CIGEL---S-FRSEVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQIETI------ANPK 217 (368)
Q Consensus 158 i~vwd~~~~~------~~~~~---~-~~~~v~~~~~~~~-~~~l~---~d~~i~vwd~~~~~~~~~~~~~------~~~v 217 (368)
|++||+.+++ ....+ . |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+..+ ...+
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 9999999886 33333 3 8889999999998 66666 5899999999999999888766 7889
Q ss_pred eEEEEecCCCeEEEEeecCCCC---eEEEEecCc--ceeeeee-ccCcceEEEEECC-CCCEEEEEeCCCcEEEEEECCC
Q 017642 218 GLCAVSQGVGSLVLVCPGLQKG---QVRVEHYAS--KRTKFIM-AHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 218 ~~~~~~~~~~~~~l~~~g~~dg---~i~i~~~~~--~~~~~~~-~~~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
.+++|+|++..++++ ++.|+ .|++|+... ..+..+. +|...|.+++|+| ++++|++++.||. |++||+++
T Consensus 218 ~~~~~~~~~~~~l~~--~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~ 294 (416)
T 2pm9_A 218 SVVEWHPKNSTRVAT--ATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPES 294 (416)
T ss_dssp EEEEECSSCTTEEEE--EECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSS
T ss_pred EEEEECCCCCCEEEE--EECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCC
Confidence 999999998654433 55677 999998775 4566677 8999999999999 8999999999999 99999999
Q ss_pred CceeEeeEeccCcccEEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 291 GTLLQEVRRGADRAEIYSLAFSSNA-QWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~sp~~-~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
++.+..+.. |...|.+++|+|++ .+|++++.||.|+|||+.+.+....
T Consensus 295 ~~~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~ 343 (416)
T 2pm9_A 295 AEQLSQFPA--RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLD 343 (416)
T ss_dssp CCEEEEEEC--SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSC
T ss_pred CccceeecC--CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcc
Confidence 999999987 78899999999999 8999999999999999998775543
No 53
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-32 Score=243.61 Aligned_cols=249 Identities=14% Similarity=0.156 Sum_probs=201.8
Q ss_pred cccccCCCCCEEEEEEcCC---CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCC
Q 017642 78 ESTSSSPPPTLLHISFNQD---HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (368)
Q Consensus 78 ~~~~~~h~~~v~~~~~s~~---g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 153 (368)
......|.+.|++++|+|+ |++|++|+ |+.|+||++++........+. .|...+.++.|++++..+++++.|
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~~~d--- 107 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ-MHTGPVLDVCWSDDGSKVFTASCD--- 107 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE-ECSSCEEEEEECTTSSEEEEEETT---
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec-cccCCEEEEEECcCCCEEEEEcCC---
Confidence 4456789999999999999 69999999 888999999874544434554 788899999999999888888887
Q ss_pred CCCcEEEEeCCCCcEEEEEecCCceeEEEE--eeCccEEE---eCCcEEEEEcCCCeEEEEEeccC--------------
Q 017642 154 PLNKVMIWDDHQSRCIGELSFRSEVRSVKL--RRDRIIVV---LEQKIFVYNFADLKLLHQIETIA-------------- 214 (368)
Q Consensus 154 ~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~-------------- 214 (368)
+.|++||+.+++.+....|...|.+++| ++++.+++ .|+.|++||+++++.+..+..+.
T Consensus 108 --g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (368)
T 3mmy_A 108 --KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVV 185 (368)
T ss_dssp --SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEE
T ss_pred --CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEE
Confidence 9999999999998887779999999999 88888777 58999999999887766665432
Q ss_pred ---------------------------CCeeEEEEecCCCe--EEEEeecCCCCeEEEEecCc----ceeeeeeccCc--
Q 017642 215 ---------------------------NPKGLCAVSQGVGS--LVLVCPGLQKGQVRVEHYAS----KRTKFIMAHDS-- 259 (368)
Q Consensus 215 ---------------------------~~v~~~~~~~~~~~--~~l~~~g~~dg~i~i~~~~~----~~~~~~~~~~~-- 259 (368)
....++.+.++... ..+++ |+.||.|++|+... .....+..|..
T Consensus 186 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 186 ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL-GSIEGRVAIHYINPPNPAKDNFTFKCHRSNG 264 (368)
T ss_dssp EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE-EETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE-ecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence 12233344333321 12443 67899999988776 34456666665
Q ss_pred ----------ceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEE
Q 017642 260 ----------RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHV 329 (368)
Q Consensus 260 ----------~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~i 329 (368)
.|++++|+|++++|++++.||. |+|||+.+++++..+.. |...|.+++|+|+|++|++++.|+..+.
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLKTSEQ--LDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEECCC--CSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred ccccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEEEecC--CCCCceEEEECCCCCeEEEEeccccccc
Confidence 7999999999999999999999 99999999999988887 7889999999999999999999887666
Q ss_pred EEccCCC
Q 017642 330 FNLKVNS 336 (368)
Q Consensus 330 wd~~~~~ 336 (368)
|++-+.+
T Consensus 342 ~~~~~~~ 348 (368)
T 3mmy_A 342 HEFYNPQ 348 (368)
T ss_dssp GGGCCTT
T ss_pred ccccCCC
Confidence 6655443
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-32 Score=245.03 Aligned_cols=246 Identities=9% Similarity=0.148 Sum_probs=202.2
Q ss_pred cccCCCCCEEEEEEcCCCCEEE-EEe----CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCC---eEEEEecCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFA-AGT----DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN---ILALVGGGPDP 151 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~-~~~----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~d~ 151 (368)
....|...|.+++|+|++..++ +|+ |+.|+||++.+.+......+ .|...+.++.|+++ +..+++++.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~l~~~~~d- 89 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI--EKAKPIKCGTFGATSLQQRYLATGDFG- 89 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE--EESSCEEEEECTTCCTTTCCEEEEETT-
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee--cccCcEEEEEEcCCCCCCceEEEecCC-
Confidence 4456999999999999997654 553 56699999998776544444 57778999999998 5777777777
Q ss_pred CCCCCcEEEEeCCCCc-EEEEEe-cCCceeEEEE------eeCccEEE---eCCcEEEEEcCCCe-EEEEEeccCC----
Q 017642 152 QYPLNKVMIWDDHQSR-CIGELS-FRSEVRSVKL------RRDRIIVV---LEQKIFVYNFADLK-LLHQIETIAN---- 215 (368)
Q Consensus 152 ~~~~~~i~vwd~~~~~-~~~~~~-~~~~v~~~~~------~~~~~~l~---~d~~i~vwd~~~~~-~~~~~~~~~~---- 215 (368)
+.|++||+.+++ .+..+. |...|.++.| ++++.+++ .|+.|++||+++++ .+..+..+.+
T Consensus 90 ----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 90 ----GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp ----SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ----CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 999999999987 777887 9999999965 67888877 58999999999886 6777765544
Q ss_pred CeeEEE----EecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECC---CCCEEEEEeCCCcEEEEEEC
Q 017642 216 PKGLCA----VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQ---DGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 216 ~v~~~~----~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp---~g~~l~s~~~dg~~i~iwd~ 288 (368)
.+.+++ |+++++. +++ |+.||.|++|+...........|...|.+++|+| ++.+|++++.||. |++||+
T Consensus 166 ~v~~~~~~~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~ 241 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERV--VCA-GYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDM 241 (357)
T ss_dssp CEEEEEEECCCC-CCCE--EEE-EETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEE
T ss_pred ceEEEEEEeccCCCCCE--EEE-EccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeC
Confidence 677777 6778874 343 6689999999988877777788999999999999 8999999999999 999999
Q ss_pred CCCceeEeeE-----eccCcccEEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCC
Q 017642 289 LDGTLLQEVR-----RGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 289 ~~~~~~~~~~-----~~~~~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
++++.+..+. . |...|.+++|+|+++ +|++++.||.|++||++++...
T Consensus 242 ~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKA--HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EEEETTTEEEEEEEEC--CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC
T ss_pred cCCCcccceeeeccCC--CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccc
Confidence 8877655544 4 788999999999998 8999999999999999987654
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.4e-32 Score=261.85 Aligned_cols=242 Identities=15% Similarity=0.236 Sum_probs=197.9
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|+|++|++|+ |+.|+|||+.++... ..+. .|...+.++.|++++..+++++.| ++
T Consensus 424 ~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~l~s~s~D-----~~ 495 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST--RRFV-GHTKDVLSVAFSLDNRQIVSASRD-----RT 495 (694)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEECTTSSCEEEEETT-----SC
T ss_pred ceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce--eEEe-CCCCCEEEEEEeCCCCEEEEEeCC-----CE
Confidence 34568999999999999999999999 888999999876554 4454 888899999999999999999988 99
Q ss_pred EEEEeCCCCcEEEEE----ecCCceeEEEEeeCc--cEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCe
Q 017642 158 VMIWDDHQSRCIGEL----SFRSEVRSVKLRRDR--IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 158 i~vwd~~~~~~~~~~----~~~~~v~~~~~~~~~--~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (368)
|++||+......... .|...|.+++|+|++ ..++ .|+.|++||++++++...+.+|...|.+++|+|+++.
T Consensus 496 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 496 IKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp EEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence 999997655433332 277789999999986 3444 5999999999999999999999999999999999984
Q ss_pred EEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc-------
Q 017642 229 LVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA------- 301 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~------- 301 (368)
+++ |+.||.|++|+...........+...|.+++|+|++.+|++++ ++. |+|||+++++.+..+....
T Consensus 576 --l~s-g~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~ 650 (694)
T 3dm0_A 576 --CAS-GGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDLKVDLKAEAEKA 650 (694)
T ss_dssp --EEE-EETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEECCCCC------
T ss_pred --EEE-EeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhhccccccccccc
Confidence 443 7789999999876544333334456799999999998887766 556 9999999998887765311
Q ss_pred ----------CcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 302 ----------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 302 ----------~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
+...+.+++|+|||++|++|+.||+|+||++.
T Consensus 651 ~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 651 DNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp ----------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 11237899999999999999999999999985
No 56
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.8e-32 Score=246.19 Aligned_cols=248 Identities=11% Similarity=0.176 Sum_probs=204.9
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCC----cceEEEcccCCceeEEEEEEeCC----e---EEEEe
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFR----EIFRRDFERGGGIGVVEMLFRCN----I---LALVG 146 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~s 146 (368)
.....|.+.|++++|+| ++|++|+ |+.|+||++...+ ......+. .|...+.++.|+++ + ..+++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-VHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-CCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEe-cCCCcEEEEEEecccccCCccccEEEE
Confidence 45568999999999999 7888888 8889999998776 12234454 78888999999988 7 78888
Q ss_pred cCCCCCCCCCcEEEEeCCCCcE-----EEEEe-c-----CCceeEEEEe----eCccE-EE---eCCcEEEEEcCC----
Q 017642 147 GGPDPQYPLNKVMIWDDHQSRC-----IGELS-F-----RSEVRSVKLR----RDRII-VV---LEQKIFVYNFAD---- 203 (368)
Q Consensus 147 ~~~d~~~~~~~i~vwd~~~~~~-----~~~~~-~-----~~~v~~~~~~----~~~~~-l~---~d~~i~vwd~~~---- 203 (368)
++.| +.|++||+.+++. +..+. | ...|.+++|+ |++.+ ++ .|+.|++||+++
T Consensus 87 ~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 87 TSFS-----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp EETT-----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred EcCC-----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 8877 9999999998886 77776 6 4899999999 99988 76 589999999988
Q ss_pred --CeEEE-----EEe-------ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeeec---c---CcceE
Q 017642 204 --LKLLH-----QIE-------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMA---H---DSRIA 262 (368)
Q Consensus 204 --~~~~~-----~~~-------~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~---~---~~~i~ 262 (368)
++.+. .+. .|...+.+++|++++ . +++ |+.||.|++|+.. .+.+..+.. | ...|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 162 SNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L--IAT-GFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E--EEE-ECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred cccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e--EEE-EeCCCcEEEEECCCCceeEEEeccccccccCCccc
Confidence 66665 663 378889999999998 3 343 6789999998876 456667777 8 99999
Q ss_pred EEEECCCCCEEEEEeCC---CcEEEEEECCCCceeEeeEecc-----------CcccEEEEEEecCCCEEEEEeCCCeEE
Q 017642 263 CFALTQDGQLLATSSTK---GTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSSDKGTVH 328 (368)
Q Consensus 263 ~v~~sp~g~~l~s~~~d---g~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~sp~~~~l~s~s~dg~i~ 328 (368)
+++|+|++++|++++.| |. |++||+++++.+..+.... |...|.+++|+|++++|++++.||.|+
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred eEEECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 99999999999999999 99 9999999999988887511 567899999999999999999999999
Q ss_pred EEEccCCCCCC
Q 017642 329 VFNLKVNSGSA 339 (368)
Q Consensus 329 iwd~~~~~~~~ 339 (368)
|||+.+++...
T Consensus 317 iwd~~~~~~~~ 327 (397)
T 1sq9_A 317 FWDVKTKERIT 327 (397)
T ss_dssp EEETTTTEEEE
T ss_pred EEEcCCCceeE
Confidence 99998876543
No 57
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=243.84 Aligned_cols=238 Identities=17% Similarity=0.242 Sum_probs=206.2
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
.|...|++++|+|++++|++|+ |+.|++|+ ..++. ...+. .|...+.++.|++++..+++++.| +.|++|
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iw 176 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGAL--LNVLN-FHRAPIVSVKWNKDGTHIISMDVE-----NVTILW 176 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCE--EEEEC-CCCSCEEEEEECTTSSEEEEEETT-----CCEEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCe--eeecc-CCCccEEEEEECCCCCEEEEEecC-----CeEEEE
Confidence 3788999999999999999999 77799999 33332 34454 788899999999999888888887 999999
Q ss_pred eCCCCcEEEEEe-cCCc---------------eeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEe
Q 017642 162 DDHQSRCIGELS-FRSE---------------VRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVS 223 (368)
Q Consensus 162 d~~~~~~~~~~~-~~~~---------------v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~ 223 (368)
|+.+++.+..+. +... +.+++|++++.+++ .++.|++||+++++.+..+..|...+.+++|+
T Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp ETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 999999988887 5554 99999999988777 68999999999999988998999999999999
Q ss_pred cCCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccC
Q 017642 224 QGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGAD 302 (368)
Q Consensus 224 ~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~ 302 (368)
++++. +++ ++.|+.|++|+... +.+..+..|...|.+++|+|++ +|++++.||. |++||+.+++.+..+.. |
T Consensus 257 ~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~ 329 (425)
T 1r5m_A 257 DTNKL--LLS-ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIV--D 329 (425)
T ss_dssp TTTTE--EEE-EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEEC--T
T ss_pred CCCCE--EEE-EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEeccc--C
Confidence 99984 333 56899999988665 5566777899999999999999 9999999999 99999999999988887 7
Q ss_pred cccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 303 RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 303 ~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 330 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 7899999999999999999999999999998776
No 58
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.9e-32 Score=251.14 Aligned_cols=243 Identities=9% Similarity=0.161 Sum_probs=192.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCc---------ceEEEcccCCc------------eeEEEEEEeCC
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE---------IFRRDFERGGG------------IGVVEMLFRCN 140 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~---------~~~~~~~~~~~------------~~~~~~~~~~~ 140 (368)
.|.+.|++++|+|+|++|++|+ |+.|+||++...+. .....+. +|. ..|.++.|+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-SHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-CCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-cccccccccccccccCceEEEEEcCC
Confidence 4678999999999999999999 88899999986552 1234454 666 67899999998
Q ss_pred e--EEEEecCCCCCCCCCcEEEEeCCCCcEE---------------------------------------EEE-e-cCCc
Q 017642 141 I--LALVGGGPDPQYPLNKVMIWDDHQSRCI---------------------------------------GEL-S-FRSE 177 (368)
Q Consensus 141 ~--~~~~s~~~d~~~~~~~i~vwd~~~~~~~---------------------------------------~~~-~-~~~~ 177 (368)
+ ..+++++.| +.|++||+.+++.. ..+ . |...
T Consensus 105 ~~~~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 105 KNAAQFLLSTND-----KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp CSSSEEEEEECS-----SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred CCcceEEEeCCC-----CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 7 566676777 99999998764432 122 2 8899
Q ss_pred eeEEEEeeCccEEE--eCCcEEEEEcCC-CeEEEE-------EeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC
Q 017642 178 VRSVKLRRDRIIVV--LEQKIFVYNFAD-LKLLHQ-------IETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (368)
Q Consensus 178 v~~~~~~~~~~~l~--~d~~i~vwd~~~-~~~~~~-------~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~ 247 (368)
|.+++|+|++.+++ .|+.|++||+++ ++.+.. +..|...+.+++|+|++.. ++++ |+.||.|++|+..
T Consensus 180 v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s-~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-TFVY-SSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-EEEE-EETTSCEEEEETT
T ss_pred eEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-EEEE-EeCCCeEEEEECc
Confidence 99999999999888 699999999984 444442 4578889999999999833 2333 6789999999876
Q ss_pred cce-----eeeeeccCc------------ceEEEEECCCCCEEEEEeCCCcEEEEEECCC-CceeEeeEeccCccc----
Q 017642 248 SKR-----TKFIMAHDS------------RIACFALTQDGQLLATSSTKGTLVRIFNTLD-GTLLQEVRRGADRAE---- 305 (368)
Q Consensus 248 ~~~-----~~~~~~~~~------------~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~---- 305 (368)
... ...+..|.. .|.+++|+|+|++|++++. +. |+|||+++ ++.+..+.. |...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~--~~~~~~~l 333 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQV--HEYLRSKL 333 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEES--CGGGTTTH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeec--cccccccc
Confidence 644 466777775 8999999999999999999 98 99999997 888888887 4321
Q ss_pred -----------EEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 306 -----------IYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 306 -----------v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
+..++|+|++++|++++.||.|+|||+.+++.
T Consensus 334 ~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCE
T ss_pred cccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcc
Confidence 33499999999999999999999999998764
No 59
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.3e-31 Score=263.77 Aligned_cols=246 Identities=13% Similarity=0.163 Sum_probs=213.7
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|.+.|.+++|+|+|++|++|+ ++.|+|||+.+++.. ..+. .|...+.++.|++++..+++++.| |.
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-----g~ 78 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEV--RSIQ-VTETPVRAGKFIARKNWIIVGSDD-----FR 78 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE--EEEE-CCSSCEEEEEEEGGGTEEEEEETT-----SE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceE--EEEe-cCCCcEEEEEEeCCCCEEEEEeCC-----Ce
Confidence 34568999999999999999999999 778999998876554 4454 788889999999999989988887 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCC-eEEEEEeccCCCeeEEEEec-CCCeEEE
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADL-KLLHQIETIANPKGLCAVSQ-GVGSLVL 231 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~l 231 (368)
|++||+.+++.+..+. |...|.+++|+|++.+++ .||.|++||++++ .....+..|...+.+++|+| +++. +
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~--l 156 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST--F 156 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEE--E
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCE--E
Confidence 9999999999999998 999999999999998887 5899999999886 77788888999999999999 5543 3
Q ss_pred EeecCCCCeEEEEecCc-ceeeeeecc-CcceEEEEECC--CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEE
Q 017642 232 VCPGLQKGQVRVEHYAS-KRTKFIMAH-DSRIACFALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIY 307 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~-~~~~~~~~~-~~~i~~v~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (368)
++ ++.||.|++|+... .....+..+ ...+.+++|+| ++.+|++++.||. |++||+.+++.+..+.. |...|.
T Consensus 157 ~~-~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~--~~~~v~ 232 (814)
T 3mkq_A 157 AS-GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVS 232 (814)
T ss_dssp EE-EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEEC--CSSCEE
T ss_pred EE-EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcC--CCCCEE
Confidence 33 66899999998754 444445444 48899999999 9999999999999 99999999999988887 778999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 308 SLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 308 ~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+++|+|++++|++++.||.|++||+.+++..
T Consensus 233 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9999999999999999999999999886644
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-31 Score=239.24 Aligned_cols=247 Identities=8% Similarity=0.038 Sum_probs=203.8
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|++++|++++ |+.|++||++..+......+. .+...+.++.|++++..+++++.| +.
T Consensus 46 ~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----~~ 119 (372)
T 1k8k_C 46 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL-RINRAARCVRWAPNEKKFAVGSGS-----RV 119 (372)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC-CCSSCEEEEEECTTSSEEEEEETT-----SS
T ss_pred eeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee-cCCCceeEEEECCCCCEEEEEeCC-----CE
Confidence 34457999999999999999999999 788999999877655444443 678889999999999888888887 99
Q ss_pred EEEEeCCCCcE---EEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEc------------------CCCeEEEEEe
Q 017642 158 VMIWDDHQSRC---IGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNF------------------ADLKLLHQIE 211 (368)
Q Consensus 158 i~vwd~~~~~~---~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~------------------~~~~~~~~~~ 211 (368)
|++||+..++. ...+. |...|.+++|+|++.+++ .|+.|++||+ ..++.+..+.
T Consensus 120 v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (372)
T 1k8k_C 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS 199 (372)
T ss_dssp EEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC
T ss_pred EEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC
Confidence 99999988763 33333 788999999999998887 5899999995 4678888888
Q ss_pred ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC
Q 017642 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 212 ~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
.|...+.+++|+++++. +++ ++.|+.|++|+.. .+.+..+..|...|.+++|+|++++|+++ .|+. |++||+.+
T Consensus 200 ~~~~~v~~~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-i~i~~~~~ 274 (372)
T 1k8k_C 200 SSCGWVHGVCFSANGSR--VAW-VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCF-PVLFTYDS 274 (372)
T ss_dssp CCSSCEEEEEECSSSSE--EEE-EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSS-CEEEEEET
T ss_pred CCCCeEEEEEECCCCCE--EEE-EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCe-EEEEEccC
Confidence 89999999999999984 343 5689999998875 56777888999999999999999988887 8899 99999987
Q ss_pred --Cce--e------------------------------------EeeEeccCcccEEEEEEe-cCC---CEEEEEeCCCe
Q 017642 291 --GTL--L------------------------------------QEVRRGADRAEIYSLAFS-SNA---QWLAVSSDKGT 326 (368)
Q Consensus 291 --~~~--~------------------------------------~~~~~~~~~~~v~~l~~s-p~~---~~l~s~s~dg~ 326 (368)
++. + ..+.. .|...|.+++|. ++| .+|++++.||.
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~ 353 (372)
T 1k8k_C 275 AAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDS-LHKNSVSQISVLSGGKAKCSQFCTTGMDGG 353 (372)
T ss_dssp TTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSS-SSSSCEEEEEEEESTTTSCSEEEEEETTSE
T ss_pred cCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccc-cccCCcceeEEecCCCcceeeEEEecCCCc
Confidence 421 0 22221 278899999976 666 99999999999
Q ss_pred EEEEEccCCCC
Q 017642 327 VHVFNLKVNSG 337 (368)
Q Consensus 327 i~iwd~~~~~~ 337 (368)
|++||++++++
T Consensus 354 i~~W~~~~~~~ 364 (372)
T 1k8k_C 354 MSIWDVRSLES 364 (372)
T ss_dssp EEEEEHHHHHH
T ss_pred eEEEEecChhH
Confidence 99999987654
No 61
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-32 Score=249.12 Aligned_cols=249 Identities=13% Similarity=0.185 Sum_probs=201.1
Q ss_pred cccCCCCCEEEEEEcC-CCCEEEEEe-CCeEEEEEecC---CCcc-eEEEcccCCceeEEEEEEeCCeEEEEecCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQ-DHGCFAAGT-DHGFRIYNCDP---FREI-FRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 153 (368)
....|.+.|++++|+| ++++|++|+ |+.|+|||+.. .... ....+ .|...+.++.|++++..+++++.|
T Consensus 58 ~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~d--- 132 (437)
T 3gre_A 58 LMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY--DCSSTVTQITMIPNFDAFAVSSKD--- 132 (437)
T ss_dssp ECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE--ECSSCEEEEEECTTSSEEEEEETT---
T ss_pred eccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec--cCCCCEEEEEEeCCCCEEEEEeCC---
Confidence 3377999999999999 999999999 88899999876 3211 11233 477889999999999889998888
Q ss_pred CCCcEEEEeCC---CCcEEEEEe-------------cCCceeEEE--EeeCccEEE---eCCcEEEEEcCCCeEEEEEec
Q 017642 154 PLNKVMIWDDH---QSRCIGELS-------------FRSEVRSVK--LRRDRIIVV---LEQKIFVYNFADLKLLHQIET 212 (368)
Q Consensus 154 ~~~~i~vwd~~---~~~~~~~~~-------------~~~~v~~~~--~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~ 212 (368)
+.|++||+. +++....+. +...+.++. +++++.+++ .|+.|++||+++++++..+..
T Consensus 133 --g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 133 --GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp --SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred --CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 999999984 555544333 344566666 456787777 589999999999999999987
Q ss_pred --cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeee-ccCcceEEEEECC----CCCEEEEEeCCCcEEE
Q 017642 213 --IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIM-AHDSRIACFALTQ----DGQLLATSSTKGTLVR 284 (368)
Q Consensus 213 --~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~-~~~~~i~~v~~sp----~g~~l~s~~~dg~~i~ 284 (368)
|...+.+++|+|+++. +++ |+.||.|++|+... ..+..+. .|...|.+++|+| ++.+|++++.||. |+
T Consensus 211 ~~h~~~v~~~~~s~~~~~--l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~ 286 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCV--LIL-GTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LT 286 (437)
T ss_dssp CGGGCCEEEEEECTTSCE--EEE-EETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EE
T ss_pred CCCCCceEEEEECCCCCE--EEE-EcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EE
Confidence 7899999999999874 443 67899999998765 4445554 7888999996664 6779999999999 99
Q ss_pred EEECCCCceeEeeEecc------------------------CcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 285 IFNTLDGTLLQEVRRGA------------------------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 285 iwd~~~~~~~~~~~~~~------------------------~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
|||+++++.+..+..+. |...|.+++|+ ++++|++++.||.|++||+.+++....
T Consensus 287 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 287 IWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKA 365 (437)
T ss_dssp EEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEE
T ss_pred EEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceE
Confidence 99999999888877431 55679999999 789999999999999999998876543
No 62
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.4e-32 Score=239.83 Aligned_cols=247 Identities=14% Similarity=0.051 Sum_probs=202.0
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcce-EEEcccCCceeEEEEEEeCCeE-EEEecCCCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIF-RRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLN 156 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~~ 156 (368)
+...|.+.|++++|+|++++|++++ |+.|+||++....... ...+. .+...+.++.|++++. .+++++.| +
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d-----g 79 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ-----G 79 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT-----S
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC-----C
Confidence 3457999999999999999999998 8889999998766211 12222 6778899999998888 88888877 9
Q ss_pred cEEEEeC-CCCcEEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEcCC---------CeEEEEEeccCCCeeEEE
Q 017642 157 KVMIWDD-HQSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFAD---------LKLLHQIETIANPKGLCA 221 (368)
Q Consensus 157 ~i~vwd~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~---------~~~~~~~~~~~~~v~~~~ 221 (368)
.|++||+ .+++...... |...|.+++|++ +.+++ .|+.|++||+++ ++++..+. +...+.+++
T Consensus 80 ~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~ 157 (342)
T 1yfq_A 80 EILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMD 157 (342)
T ss_dssp CEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEE
T ss_pred eEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEE
Confidence 9999999 8887755555 889999999999 77666 589999999987 76666665 788899999
Q ss_pred EecCCCeEEEEeecCCCCeEEEEecCc-ce---eeeeeccCcceEEEEECC-CCCEEEEEeCCCcEEEEEECCCC-----
Q 017642 222 VSQGVGSLVLVCPGLQKGQVRVEHYAS-KR---TKFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDG----- 291 (368)
Q Consensus 222 ~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~---~~~~~~~~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~~----- 291 (368)
|++++ +++ ++.|+.|++|+... .. ......|...|.+++|+| ++++|++++.||. |+|||+...
T Consensus 158 ~~~~~----l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 158 TNSSR----LIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDYN 231 (342)
T ss_dssp ECSSE----EEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCSTT
T ss_pred ecCCc----EEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCcccc
Confidence 98876 333 56899999998776 22 223456888999999999 9999999999999 999999887
Q ss_pred -ceeEeeEecc-------CcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 292 -TLLQEVRRGA-------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 292 -~~~~~~~~~~-------~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+.+..+..+. |...|.+++|+|++++|++++.||.|++||+.+++....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhh
Confidence 7777777631 134899999999999999999999999999998775543
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2e-32 Score=249.10 Aligned_cols=237 Identities=8% Similarity=0.065 Sum_probs=195.5
Q ss_pred CEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 87 TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
.+++++|+|+|++|++++ |+.|++||+.+.+.. ..+. .+ ..+....+++++..+++++.| +.|++||+.+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~--~~~~-~~-~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 128 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGS--KMLK-RA-DYTAVDTAKLQMRRFILGTTE-----GDIKVLDSNF 128 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETT--TTSC-SC-CEEEEEEECSSSCEEEEEETT-----SCEEEECTTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEeccccee--eEEe-cC-CceEEEEEecCCCEEEEEECC-----CCEEEEeCCC
Confidence 345689999999999999 888999998765543 2232 33 333444678888888888887 9999999999
Q ss_pred CcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeE
Q 017642 166 SRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQV 241 (368)
Q Consensus 166 ~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i 241 (368)
++....+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...|.+++|+|+++. ++ +++.|+.|
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~-s~~~d~~v 205 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRN--VL-SASLDGTI 205 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTE--EE-EEETTSCE
T ss_pred cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCE--EE-EEcCCCcE
Confidence 99888875 999999999999998887 5899999999999999999999999999999999985 33 36689999
Q ss_pred EEEecCc-ceeeeeec---cCcceE---------------------EEEECCCCCEEEEEeCCCcEEEEEECCCCceeEe
Q 017642 242 RVEHYAS-KRTKFIMA---HDSRIA---------------------CFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (368)
Q Consensus 242 ~i~~~~~-~~~~~~~~---~~~~i~---------------------~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~ 296 (368)
++|+... +.+..+.. |...|. +++|+|++++|++++.||. |++||+++++.+..
T Consensus 206 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 206 RLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEEEE
T ss_pred EEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCceeEE
Confidence 9998764 44455543 334444 4555789999999999999 99999999998877
Q ss_pred eEeccCcccEEEEEEecCCC-EEEEEeCCCeEEEEEccCCCC
Q 017642 297 VRRGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 297 ~~~~~~~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~~ 337 (368)
+... |...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 285 ~~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 285 LPSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp ECCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 7643 678999999999999 999999999999999998754
No 64
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.3e-31 Score=238.81 Aligned_cols=247 Identities=16% Similarity=0.226 Sum_probs=202.0
Q ss_pred ccccCCCCCEEEEEEcCC---CC--EEEEEeCCeEEEEEecCCCcceEEE-cc-cCCceeEEEEEEeCC----eEEEEec
Q 017642 79 STSSSPPPTLLHISFNQD---HG--CFAAGTDHGFRIYNCDPFREIFRRD-FE-RGGGIGVVEMLFRCN----ILALVGG 147 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~---g~--~l~~~~d~~i~iw~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~----~~~~~s~ 147 (368)
.....|...|++++|+|+ +. ++++++++.|++|++.+.+...... +. ..+...+.+++|+++ +..++++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 345589999999999984 33 5555568899999998655432211 11 125677889999887 6788888
Q ss_pred CCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEE---eccCCCeeE
Q 017642 148 GPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQI---ETIANPKGL 219 (368)
Q Consensus 148 ~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~---~~~~~~v~~ 219 (368)
+.| |.|++||+.+++.+..+. |...|.+++|+| ++.+++ .|+.|++||+++++.+..+ ..|...+.+
T Consensus 92 ~~d-----g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 92 GSR-----GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp ETT-----CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEE
T ss_pred cCC-----CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeE
Confidence 887 999999999999999998 999999999999 888777 5899999999999998888 678999999
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCcce-eeee----------------------------eccCcceEEEEECCCC
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFI----------------------------MAHDSRIACFALTQDG 270 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~-~~~~----------------------------~~~~~~i~~v~~sp~g 270 (368)
++|+++++. +++ ++.||.|++|+..... ...+ ..|...|.+++|+ +
T Consensus 167 ~~~~~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~ 241 (366)
T 3k26_A 167 ADYDLLGEK--IMS-CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G 241 (366)
T ss_dssp EEECTTSSE--EEE-EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T
T ss_pred EEECCCCCE--EEE-ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C
Confidence 999999985 333 5689999999876532 2222 2389999999998 7
Q ss_pred CEEEEEeCCCcEEEEEECCCCce--------------eEeeEeccCcccEEEEEEecC--CCEEEEEeCCCeEEEEEccC
Q 017642 271 QLLATSSTKGTLVRIFNTLDGTL--------------LQEVRRGADRAEIYSLAFSSN--AQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~~~~~~--------------~~~~~~~~~~~~v~~l~~sp~--~~~l~s~s~dg~i~iwd~~~ 334 (368)
++|++++.||. |++||+.+++. +..+.. |...|.+++|+|+ +++|++++.||.|++||+.+
T Consensus 242 ~~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 242 DLILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp TEEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 79999999999 99999987754 666666 7788999999999 99999999999999999998
Q ss_pred CCCC
Q 017642 335 NSGS 338 (368)
Q Consensus 335 ~~~~ 338 (368)
++..
T Consensus 319 ~~~~ 322 (366)
T 3k26_A 319 EDPH 322 (366)
T ss_dssp SSGG
T ss_pred CCCc
Confidence 7643
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-31 Score=242.18 Aligned_cols=238 Identities=11% Similarity=0.103 Sum_probs=194.8
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
..+....|++++++|++|+ |+.|++||+...... ..+. .|...+.++.|++++..+++++.| +.|++||+.
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~ 169 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR--EIDQ-AHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVK 169 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE--EETT-SSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETT
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee--eecc-cccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCC
Confidence 3445557899999999999 788999998755443 4454 788999999999999999999888 999999999
Q ss_pred CCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEec---cCCCeeEE-----------------
Q 017642 165 QSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIET---IANPKGLC----------------- 220 (368)
Q Consensus 165 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~---~~~~v~~~----------------- 220 (368)
+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+.. +...+..+
T Consensus 170 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 170 DGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp TCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred CCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 999999888 999999999999999887 589999999999999988864 33344444
Q ss_pred ----EEecCCCeEEEEeecCCCCeEEEEecCcc-eeeee-eccCcceEEEEECCCCC-EEEEEeCCCcEEEEEECCCCce
Q 017642 221 ----AVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFI-MAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGTL 293 (368)
Q Consensus 221 ----~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~-~~~~~~i~~v~~sp~g~-~l~s~~~dg~~i~iwd~~~~~~ 293 (368)
+|+++++. +++ |+.||.|++|+.... .+..+ ..|...|.+++|+|+++ +|++|+.||. |++||+++++.
T Consensus 250 v~~~~~s~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~ 325 (420)
T 3vl1_A 250 KNNLEFGTYGKY--VIA-GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPEC 325 (420)
T ss_dssp CCTTCSSCTTEE--EEE-EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTS
T ss_pred ccceEEcCCCCE--EEE-EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcC
Confidence 45666654 443 678999999887653 33343 45888999999999999 9999999999 99999998754
Q ss_pred -eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 294 -LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 294 -~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
+..+..+ |...|.++.| +++++|++++.|+.|++|++.+++.
T Consensus 326 ~~~~~~~~-~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 326 PVGEFLIN-EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp CSEEEEES-TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTC
T ss_pred chhhhhcc-CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCC
Confidence 6667654 5667888855 5788999999999999999988544
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=244.07 Aligned_cols=239 Identities=11% Similarity=0.143 Sum_probs=202.7
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCcee---------------EEEEEEeCCeE
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIG---------------VVEMLFRCNIL 142 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 142 (368)
.....|...|.+++|+|++++|++++ |+.|++||+.+.+... .+. .+... +.++.|.+++.
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (425)
T 1r5m_A 143 NVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ--HFE-LKETGGSSINAENHSGDGSLGVDVEWVDDDK 219 (425)
T ss_dssp EEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE--EEC-CC---------------CCCBSCCEEEETTE
T ss_pred eeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE--Eee-ccccCccceeeccccCCcceeeEEEEcCCCE
Confidence 44567999999999999999999998 8889999998766543 332 23333 67788888877
Q ss_pred EEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCee
Q 017642 143 ALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKG 218 (368)
Q Consensus 143 ~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~ 218 (368)
++++ +.+ +.|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+.
T Consensus 220 ~~~~-~~~-----g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~ 293 (425)
T 1r5m_A 220 FVIP-GPK-----GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIV 293 (425)
T ss_dssp EEEE-CGG-----GCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEE
T ss_pred EEEE-cCC-----CeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEE
Confidence 5554 444 999999999998888887 899999999999998887 589999999999999999988999999
Q ss_pred EEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCc-----
Q 017642 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT----- 292 (368)
Q Consensus 219 ~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~----- 292 (368)
+++|++++ .+++ ++.|+.|++|+.. .+.+..+..|...|.+++|+|++++|++++.||. |++||+.+++
T Consensus 294 ~~~~~~~~---~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~i~~~~~~~~~~~~ 368 (425)
T 1r5m_A 294 SASWVGDD---KVIS-CSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ-VNVYDLKKLNSKSRS 368 (425)
T ss_dssp EEEEETTT---EEEE-EETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC-EEEEECHHHHC----
T ss_pred EEEECCCC---EEEE-EeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe-EEEEECCCCccceee
Confidence 99999998 2343 5689999998865 4666678889999999999999999999999999 9999999888
Q ss_pred ---------------eeEeeEeccCcc--cEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 293 ---------------LLQEVRRGADRA--EIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 293 ---------------~~~~~~~~~~~~--~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
.+..+.. |.. .|.+++|+|++++|++++.||.|++||++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 369 LYGNRDGILNPLPIPLYASYQS--SQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ----------CEECCEEEEECC--TTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eecccccccCcccchhhhhhcC--cccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 7878877 544 89999999999999999999999999985
No 67
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-32 Score=264.36 Aligned_cols=246 Identities=16% Similarity=0.167 Sum_probs=203.0
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCC--eEEEEecCCCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN--ILALVGGGPDPQYPLN 156 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~d~~~~~~ 156 (368)
+..+|.+.|++++|+|+|++|++|+ |+.|+||++..........+. .|...|.++.|+++ +..+++++.| |
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~~~l~s~s~D-----g 77 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-GHEGPVWRVDWAHPKFGTILASCSYD-----G 77 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCTTSCSEEEEEETT-----S
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-CCcCceEEEEecCCCCCCEEEEEeCC-----C
Confidence 4578999999999999999999998 888999999865555556665 78899999999877 8888888887 9
Q ss_pred cEEEEeCCCCc--EEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEEEEcCCC--eEEEEEeccCCCeeEEEEecC-
Q 017642 157 KVMIWDDHQSR--CIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADL--KLLHQIETIANPKGLCAVSQG- 225 (368)
Q Consensus 157 ~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~- 225 (368)
.|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .||.|++||++++ .....+..|...+.+++|+|.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999999886 555565 8999999999998 87777 5899999999877 334556788899999999994
Q ss_pred ------------CCeEEEEeecCCCCeEEEEecCc-----ceeeeeeccCcceEEEEECCC---CCEEEEEeCCCcEEEE
Q 017642 226 ------------VGSLVLVCPGLQKGQVRVEHYAS-----KRTKFIMAHDSRIACFALTQD---GQLLATSSTKGTLVRI 285 (368)
Q Consensus 226 ------------~~~~~l~~~g~~dg~i~i~~~~~-----~~~~~~~~~~~~i~~v~~sp~---g~~l~s~~~dg~~i~i 285 (368)
++. +++ |+.||.|++|+... .....+.+|...|++++|+|+ +++|++++.||. |++
T Consensus 158 ~~~~~~~~~~~d~~~--l~s-gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~i 233 (753)
T 3jro_A 158 IEEDGEHNGTKESRK--FVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CII 233 (753)
T ss_dssp ---------CGGGCC--EEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEE
T ss_pred cccccccccCCCCCE--EEE-EECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEE
Confidence 553 343 66899999988754 344567889999999999999 899999999999 999
Q ss_pred EECCCCc-----eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 286 FNTLDGT-----LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 286 wd~~~~~-----~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
||+.+++ .+.... .|...|.+++|+|+|++|++++.||.|++|++.++..
T Consensus 234 wd~~~~~~~~~~~~~~~~--~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~ 288 (753)
T 3jro_A 234 WTQDNEQGPWKKTLLKEE--KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 288 (753)
T ss_dssp EEESSSSSCCBCCBSSSS--CCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSC
T ss_pred ecCCCCCCcceeEEeccC--CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCC
Confidence 9998874 222222 2677899999999999999999999999999986543
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.2e-31 Score=238.33 Aligned_cols=241 Identities=19% Similarity=0.232 Sum_probs=193.4
Q ss_pred cCCCCCEEEEEEcCC---CCEEEEEe-CCeEEEEEecCCC-cceEEEcccCCceeEEEEEE------eCCeEEEEecCCC
Q 017642 82 SSPPPTLLHISFNQD---HGCFAAGT-DHGFRIYNCDPFR-EIFRRDFERGGGIGVVEMLF------RCNILALVGGGPD 150 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~---g~~l~~~~-d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~~s~~~d 150 (368)
..|...|.+++|+|+ |++|++|+ |+.|++||+...+ .. ..+. .|...+.++.| ++++..+++++.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV--YSVK-GHKEIINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS--EEEC-CCSSCEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE--EEEE-ecccceEEEeeccccccCCCccEEEEEeCC
Confidence 468899999999998 69999998 8889999998776 33 3343 67777888854 5678788888887
Q ss_pred CCCCCCcEEEEeCCCCc-EEEEEe-cCC----ceeEEE----EeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCe
Q 017642 151 PQYPLNKVMIWDDHQSR-CIGELS-FRS----EVRSVK----LRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPK 217 (368)
Q Consensus 151 ~~~~~~~i~vwd~~~~~-~~~~~~-~~~----~v~~~~----~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v 217 (368)
+.|++||+.+++ .+..+. +.+ .+.+++ |++++.+++ .|+.|++||+++++.... ..+...+
T Consensus 139 -----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v 212 (357)
T 3i2n_A 139 -----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGV 212 (357)
T ss_dssp -----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCE
T ss_pred -----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCce
Confidence 999999999886 667765 333 788988 678888888 579999999999987554 4678899
Q ss_pred eEEEEec---CCCeEEEEeecCCCCeEEEEecCcce-eeee-----eccCcceEEEEECCCCC-EEEEEeCCCcEEEEEE
Q 017642 218 GLCAVSQ---GVGSLVLVCPGLQKGQVRVEHYASKR-TKFI-----MAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFN 287 (368)
Q Consensus 218 ~~~~~~~---~~~~~~l~~~g~~dg~i~i~~~~~~~-~~~~-----~~~~~~i~~v~~sp~g~-~l~s~~~dg~~i~iwd 287 (368)
.+++|+| +++. +++ |+.||.|++|+..... ...+ ..|...|++++|+|+++ +|++++.||. |++||
T Consensus 213 ~~~~~~~~~~~~~~--l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd 288 (357)
T 3i2n_A 213 CSLEFDRKDISMNK--LVA-TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWK 288 (357)
T ss_dssp EEEEESCSSSSCCE--EEE-EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEE
T ss_pred EEEEcCCCCCCCCE--EEE-ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEee
Confidence 9999999 7775 333 5689999998866532 2233 38999999999999998 8999999999 99999
Q ss_pred CCCC-------------------ceeEeeEeccCcccEEEEEEecCCCEEE-EEeCCCeEEEEEccCCCC
Q 017642 288 TLDG-------------------TLLQEVRRGADRAEIYSLAFSSNAQWLA-VSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 288 ~~~~-------------------~~~~~~~~~~~~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~~~ 337 (368)
++++ +.+..+.. |...|.+++|+|++++|+ +++.||.|+|||+.+.+.
T Consensus 289 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 289 YEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EECCSCC--CCTTSCCCCCCCEEEEEEEEEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred cCCCcccccccCCCCccccccccceeecccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 9754 34556666 788999999999999988 899999999999987653
No 69
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-30 Score=227.80 Aligned_cols=240 Identities=14% Similarity=0.157 Sum_probs=201.3
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|.+.|++++| +++++|++|+ |+.|++||+.+.... ..+. .+...+.++.|++++..+++++.| +.
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----g~ 82 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLG--TVVY-TGQGFLNSVCYDSEKELLLFGGKD-----TM 82 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEE--EEEE-ECSSCEEEEEEETTTTEEEEEETT-----SC
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEE--EEee-cCCccEEEEEECCCCCEEEEecCC-----Ce
Confidence 456789999999999 9999999999 888999999765544 3343 678889999999999999998887 99
Q ss_pred EEEEeCCCC---cEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEec-CCCeE
Q 017642 158 VMIWDDHQS---RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQ-GVGSL 229 (368)
Q Consensus 158 i~vwd~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~ 229 (368)
|++|++... +.+..+. |...|.++.|. +.+++ .|+.|++|| .++.+..+..|...+..+.+.+ +++.
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~- 157 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENK- 157 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTE-
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCE-
Confidence 999998754 5566666 89999999994 44444 699999999 6788888889999999999998 6664
Q ss_pred EEEeecCCCCeEEEEecCcceeeeeec-cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 230 VLVCPGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~~~~~~~~~-~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
+++ ++.||.|++|+ .......+.. |...|.+++|+|++. |++++.||. |++||+++++.+..+.. |...|.+
T Consensus 158 -l~~-~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~--~~~~i~~ 230 (313)
T 3odt_A 158 -FLT-ASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEG--HESFVYC 230 (313)
T ss_dssp -EEE-EETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEE
T ss_pred -EEE-EECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhc--CCceEEE
Confidence 333 56899999998 4455556665 899999999999998 999999999 99999999999999987 7889999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 309 LAFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 309 l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
++|+|++ .|++++.||.|++||+.+++....
T Consensus 231 ~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 231 IKLLPNG-DIVSCGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp EEECTTS-CEEEEETTSEEEEECTTTCCEEEE
T ss_pred EEEecCC-CEEEEecCCEEEEEECCCCceeEE
Confidence 9999999 588999999999999998865443
No 70
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.1e-31 Score=243.27 Aligned_cols=247 Identities=12% Similarity=0.158 Sum_probs=202.2
Q ss_pred ccccCCCCCEEEEEEcCC-CCEEEEEe-CCeEEEEEecCC--------CcceEEEcccCCceeEEEEEEeCCeE-EEEec
Q 017642 79 STSSSPPPTLLHISFNQD-HGCFAAGT-DHGFRIYNCDPF--------REIFRRDFERGGGIGVVEMLFRCNIL-ALVGG 147 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~ 147 (368)
.....|.+.|++++|+|+ +.+|++++ ++.|++|++... .......+. .|...+.++.|++++. .++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR-GHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE-CCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec-CCCCCeEEEEeCCCCCCeEEEE
Confidence 345679999999999997 67889888 777999999761 122223443 7788899999999877 88888
Q ss_pred CCCCCCCCCcEEEEeCCCCcE-------EEEEe-cCCceeEEEEee-CccEEE---eCCcEEEEEcCCC---eEEEEEec
Q 017642 148 GPDPQYPLNKVMIWDDHQSRC-------IGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADL---KLLHQIET 212 (368)
Q Consensus 148 ~~d~~~~~~~i~vwd~~~~~~-------~~~~~-~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~---~~~~~~~~ 212 (368)
+.| |.|++||+..+.. ...+. |...|.+++|+| ++.+++ .|+.|++||++++ +.+..+..
T Consensus 201 ~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 201 SDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp CTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 877 9999999987421 34444 889999999999 566665 5899999999887 56777888
Q ss_pred cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc--ceeeeeeccCcceEEEEECCCCC-EEEEEeCCCcEEEEEECC
Q 017642 213 IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTL 289 (368)
Q Consensus 213 ~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~~~~~~~~~~~i~~v~~sp~g~-~l~s~~~dg~~i~iwd~~ 289 (368)
|...+.+++|+|+++.+++ +|+.||.|++|+... ..+..+..|...|.+++|+|+++ +|++++.||. |+|||+.
T Consensus 276 ~~~~v~~i~~~p~~~~~l~--tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~ 352 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILA--TGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLS 352 (430)
T ss_dssp CSSCEEEEEECSSCTTEEE--EEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGG
T ss_pred CCCCeEEEEeCCCCCCEEE--EEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCC
Confidence 9999999999999986443 367899999998775 45777888999999999999995 7999999999 9999998
Q ss_pred C--------------CceeEeeEeccCcccEEEEEEecCCC-EEEEEeCCCeEEEEEccCCC
Q 017642 290 D--------------GTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 290 ~--------------~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~ 336 (368)
. .+.+..+.+ |...|.+++|+|++. +|++++.||.|+||++.+..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHH
T ss_pred CCccccCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEEECCCCEEEeEccccc
Confidence 7 245555555 778899999999999 89999999999999997643
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-32 Score=253.34 Aligned_cols=242 Identities=10% Similarity=-0.001 Sum_probs=190.8
Q ss_pred CCCCCEEEEEEcCCC---------CEEEEEe--------------------CCeEEEEEecCCCcceE--EEcccCCcee
Q 017642 83 SPPPTLLHISFNQDH---------GCFAAGT--------------------DHGFRIYNCDPFREIFR--RDFERGGGIG 131 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g---------~~l~~~~--------------------d~~i~iw~~~~~~~~~~--~~~~~~~~~~ 131 (368)
.+.+.|.+|+|+|++ ++||+|. |+.|+||++++.+.... ..+. .+...
T Consensus 131 ~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~ 209 (524)
T 2j04_B 131 NVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGE 209 (524)
T ss_dssp ECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE-ECCCS
T ss_pred ECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCc
Confidence 457789999999886 6776644 45699999987664321 2233 45667
Q ss_pred EEEEEEeCC------eEEEEecCCCCCCCCCcEEEEeCCCCcE-----------EEEEe-cCCceeEEEEeeCccEEE--
Q 017642 132 VVEMLFRCN------ILALVGGGPDPQYPLNKVMIWDDHQSRC-----------IGELS-FRSEVRSVKLRRDRIIVV-- 191 (368)
Q Consensus 132 ~~~~~~~~~------~~~~~s~~~d~~~~~~~i~vwd~~~~~~-----------~~~~~-~~~~v~~~~~~~~~~~l~-- 191 (368)
+..+.|+++ +..+++++.| |+|++||+.+++. ...+. |...|.+++|++++.++.
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~D-----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs 284 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQE-----GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGF 284 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETT-----SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEE
T ss_pred EEEEEECCCCCCCCCCceEEEEecC-----CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEe
Confidence 889999986 4678888887 9999999987642 23555 889999999998775444
Q ss_pred eCCcEEEEEcCCCe-EEEEEeccCCCeeEE--EEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCc--ceEEEE
Q 017642 192 LEQKIFVYNFADLK-LLHQIETIANPKGLC--AVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDS--RIACFA 265 (368)
Q Consensus 192 ~d~~i~vwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~--~i~~v~ 265 (368)
.||+|++||+++++ ....+..|...|.++ ++++++.. +++ +|+.|++|+||+... +....+.+|.. .|.+++
T Consensus 285 ~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~-~la-S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~ 362 (524)
T 2j04_B 285 KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDT-VVS-TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVV 362 (524)
T ss_dssp TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCC-EEE-EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEE
T ss_pred CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCe-EEE-EeccCCeEEEEECCCCCcccccccccccCcccceE
Confidence 69999999998764 455678899999998 56777633 344 477999999998765 44555666653 588999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 266 LTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 266 ~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
|+|+++.|++++.|+. |++||++++.++..+.+ |.+.|++|+|+|+|++|++|+.||+|++||+..+
T Consensus 363 fsp~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 363 YCPQIYSYIYSDGASS-LRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp EETTTTEEEEECSSSE-EEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred eCCCcCeEEEeCCCCc-EEEEECcccccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 9999999999999999 99999999998888887 8899999999999999999999999999998653
No 72
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.5e-31 Score=239.73 Aligned_cols=246 Identities=12% Similarity=0.142 Sum_probs=202.0
Q ss_pred ccccCCCCCEEEEEEcC-CCCEEEEEe-CCeEEEEEecCCCc-----ceEEEcccCCceeEEEEEEeCCe-EEEEecCCC
Q 017642 79 STSSSPPPTLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFRE-----IFRRDFERGGGIGVVEMLFRCNI-LALVGGGPD 150 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d 150 (368)
.....|...|++++|+| ++++|++|+ |+.|+||++..... .....+. .|...+.++.|++++ ..+++++.|
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE-GHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE-CCSSCEEEEEECSSBTTEEEEEETT
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec-CCCCeEEEEEECcCCCCEEEEEcCC
Confidence 34568999999999999 999999999 88899999987632 1123444 788899999999997 578888777
Q ss_pred CCCCCCcEEEEeCCCCcEEEEE--e-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEE-eccCCC-eeEEEE
Q 017642 151 PQYPLNKVMIWDDHQSRCIGEL--S-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQI-ETIANP-KGLCAV 222 (368)
Q Consensus 151 ~~~~~~~i~vwd~~~~~~~~~~--~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~-~~~~~~-v~~~~~ 222 (368)
+.|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++.+..+ ..|.+. +..+.|
T Consensus 154 -----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 154 -----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp -----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred -----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 99999999999999998 5 899999999999998887 5899999999999999888 677665 788999
Q ss_pred ecCCCeEEEEeec---CCCCeEEEEecCcce--eeee-eccCcceEEEEECCCCCEEE-EEeCCCcEEEEEECCCCce-e
Q 017642 223 SQGVGSLVLVCPG---LQKGQVRVEHYASKR--TKFI-MAHDSRIACFALTQDGQLLA-TSSTKGTLVRIFNTLDGTL-L 294 (368)
Q Consensus 223 ~~~~~~~~l~~~g---~~dg~i~i~~~~~~~--~~~~-~~~~~~i~~v~~sp~g~~l~-s~~~dg~~i~iwd~~~~~~-~ 294 (368)
++++.. +++ | +.|+.|++|+..... +... ..|...+.+++|+|++++|+ +++.||. |++||+.+++. +
T Consensus 229 ~~~~~~--l~~-g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~ 304 (402)
T 2aq5_A 229 VSEGKI--LTT-GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFL 304 (402)
T ss_dssp CSTTEE--EEE-EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCE
T ss_pred cCCCcE--EEE-eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcce
Confidence 999864 333 4 689999999877632 2222 25777899999999999886 4557999 99999999884 5
Q ss_pred EeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 295 QEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 295 ~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
..+....+...|.+++|+|++.++++ .++.+++|++.+++
T Consensus 305 ~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 305 HYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp EEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTE
T ss_pred EeecccccCCcccceEEeccccccee--cceeEEEEEcCCCc
Confidence 56665445689999999999998864 56799999998753
No 73
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-30 Score=225.01 Aligned_cols=241 Identities=15% Similarity=0.210 Sum_probs=199.4
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCc-ceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFRE-IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.....|...|.+++|+|++++|++++ |+.|++|++..... .....+. .|...+.++.|+++ .+++++.| +
T Consensus 53 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~--~l~~~~~d-----~ 124 (313)
T 3odt_A 53 TVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSFQDG--VVISGSWD-----K 124 (313)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEEETT--EEEEEETT-----S
T ss_pred EEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchh-hcccCEEEEEecCC--EEEEEeCC-----C
Confidence 34557889999999999999999999 77899999876432 2223443 78888999999655 44555555 9
Q ss_pred cEEEEeCCCCcEEEEEe-cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEec-cCCCeeEEEEecCCCeEE
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 230 (368)
.|++|| .++.+..+. |...+.++++.+ ++..++ .|+.|++|| .++....+.. +...+.+++|++++.
T Consensus 125 ~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~--- 197 (313)
T 3odt_A 125 TAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH--- 197 (313)
T ss_dssp EEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE---
T ss_pred CEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe---
Confidence 999999 677777777 999999999998 777776 589999999 4566677766 888999999999986
Q ss_pred EEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEE
Q 017642 231 LVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (368)
+++ ++.||.|++|+.. .+.+..+..|...|++++|+|++ .|++++.||. |++||+.+++.+..+.. |...|.++
T Consensus 198 ~~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~--~~~~i~~~ 272 (313)
T 3odt_A 198 FIS-CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITL--PAISIWSV 272 (313)
T ss_dssp EEE-EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEEC--SSSCEEEE
T ss_pred EEE-ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEec--cCceEEEE
Confidence 333 6689999998876 46677788999999999999999 5889999999 99999999999999987 67799999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 310 AFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 310 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+|+|+++ +++++.||.|++||+++++....
T Consensus 273 ~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 273 DCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred EEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 9999998 56788999999999998776544
No 74
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.2e-31 Score=229.55 Aligned_cols=206 Identities=11% Similarity=0.190 Sum_probs=182.7
Q ss_pred EEEcccCCceeEEEEEEeCCe-EEEEecCCCCCCCCCcEEEEeCCC-----CcEEEEEe-cCCceeEEEEeeCccEEE--
Q 017642 121 RRDFERGGGIGVVEMLFRCNI-LALVGGGPDPQYPLNKVMIWDDHQ-----SRCIGELS-FRSEVRSVKLRRDRIIVV-- 191 (368)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~~~~i~vwd~~~-----~~~~~~~~-~~~~v~~~~~~~~~~~l~-- 191 (368)
...+. +|...|.+++|+++. ..+++++.| ++|++||+.. +.++..+. |...|.+++|++++.+++
T Consensus 10 ~~~l~-gH~~~V~~l~~~~~~~~~l~s~s~D-----~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 10 RGTLE-GHNGWVTSLATSAGQPNLLLSASRD-----KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEC-CCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEc-cccceEEEEEccCCCccEEEEecCC-----ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 34565 899999999999854 678888887 9999999764 34566777 999999999999999888
Q ss_pred -eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCC-
Q 017642 192 -LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQD- 269 (368)
Q Consensus 192 -~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~- 269 (368)
.|++|++||+++++.+..+.+|...|.+++|++++.. ++ +|+.|+.|++|+..+..+..+.+|...|.++.|+|.
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~--l~-s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~ 160 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASM--II-SGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNE 160 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCE--EE-EEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC-
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCE--EE-EEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCC
Confidence 5999999999999999999999999999999999884 44 377899999999999999999999999999999985
Q ss_pred -----CCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 270 -----GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 270 -----g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+.+|++++.|+. |++||+++++....+.+ |...|.+++|+|+|++|++++.||+|+|||+.+++..
T Consensus 161 ~~~~~~~~l~s~~~d~~-i~~wd~~~~~~~~~~~~--h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 161 KADDDSVTIISAGNDKM-VKAWNLNQFQIEADFIG--HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp -----CCEEEEEETTSC-EEEEETTTTEEEEEECC--CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CCCCCccEEEEEeCCCE-EEEEECCcchhheeecC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 448999999999 99999999998888887 7889999999999999999999999999999887543
No 75
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.1e-30 Score=264.81 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=212.8
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|.+.|++++|+|+|++|++|+ |+.|+|||+.+++.. ..+. .|...+.+++|++++..+++++.| +.
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~l~s~~~d-----~~ 680 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL--LDIK-AHEDEVLCCAFSSDDSYIATCSAD-----KK 680 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE--EEEC-CCSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE--EEec-cCCCCEEEEEEecCCCEEEEEeCC-----Ce
Confidence 34568999999999999999999999 788999999877655 4454 788999999999999999998887 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
|++||+.+++.+..+. |...|.+++|+++ +.+++ .|+.|++||+++++++..+.+|...|.+++|+|+++. +
T Consensus 681 v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~--l 758 (1249)
T 3sfz_A 681 VKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL--L 758 (1249)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE--E
T ss_pred EEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCE--E
Confidence 9999999999999998 9999999999994 44555 5899999999999999999999999999999999985 3
Q ss_pred EeecCCCCeEEEEecCcce-ee------------------------------------------------------e-ee
Q 017642 232 VCPGLQKGQVRVEHYASKR-TK------------------------------------------------------F-IM 255 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~-~~------------------------------------------------------~-~~ 255 (368)
++ |+.||.|++|+..... .. . ..
T Consensus 759 ~s-~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~ 837 (1249)
T 3sfz_A 759 AS-CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHT 837 (1249)
T ss_dssp EE-EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred EE-EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcC
Confidence 43 6689999999865321 11 1 12
Q ss_pred ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 256 AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 256 ~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
+|...|.+++|+|+++++++++.||. |++||+.+++.+..+.+ |...|.+++|+|+|++|++++.||.|++|++.+.
T Consensus 838 ~~~~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 838 GHHSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRG--HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp SSSSCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHH
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecCC--CccceEEEEECCCCCEEEEEeCCCeEEEEEcccc
Confidence 67788999999999999999999999 99999999999988887 7889999999999999999999999999998754
No 76
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-31 Score=248.77 Aligned_cols=240 Identities=10% Similarity=0.073 Sum_probs=188.1
Q ss_pred cCCCCCEEEEEEcCC------CCEEEEEe-CCeEEEEEecCCCcc---------eEEEcccCCceeEEEEEEeCCeEEEE
Q 017642 82 SSPPPTLLHISFNQD------HGCFAAGT-DHGFRIYNCDPFREI---------FRRDFERGGGIGVVEMLFRCNILALV 145 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~------g~~l~~~~-d~~i~iw~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (368)
..|.+.|.+++|+|+ +.+||+++ |+.|+|||+...... ....+. .|...+.+++|+++. .++
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~-~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLS-LADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEEC-CTTTCEEEEEESSSS-EEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEE-cCCCCEEEEEecCCC-eEE
Confidence 457789999999997 57999998 888999999765421 012343 677889999998876 577
Q ss_pred ecCCCCCCCCCcEEEEeCCCCc-EEEEEe-cCCceeEE--EEeeCc-cEEE---eCCcEEEEEcCCCeEEEEEeccCC--
Q 017642 146 GGGPDPQYPLNKVMIWDDHQSR-CIGELS-FRSEVRSV--KLRRDR-IIVV---LEQKIFVYNFADLKLLHQIETIAN-- 215 (368)
Q Consensus 146 s~~~d~~~~~~~i~vwd~~~~~-~~~~~~-~~~~v~~~--~~~~~~-~~l~---~d~~i~vwd~~~~~~~~~~~~~~~-- 215 (368)
+++.| |+|++||+++++ +...+. |...|.++ +|++++ .+++ .|++|+|||+++++++..+.+|..
T Consensus 282 sgs~D-----gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 282 CGFKN-----GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEETT-----SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred EEeCC-----CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 77777 999999998774 445566 99999999 567887 7766 599999999999887777766643
Q ss_pred CeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCC---
Q 017642 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG--- 291 (368)
Q Consensus 216 ~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~--- 291 (368)
.+.+++|+|+++. +++ ++.|+.|++|+... ..+..+.+|...|++|+|+|+|++|++|+.||. |+|||+..+
T Consensus 357 ~v~~v~fsp~~~~--l~s-~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~~~~ 432 (524)
T 2j04_B 357 NLVPVVYCPQIYS--YIY-SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARRLLH 432 (524)
T ss_dssp SCCCEEEETTTTE--EEE-ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSSTTT
T ss_pred cccceEeCCCcCe--EEE-eCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHhhcc
Confidence 4788999999885 443 56799999988654 555778899999999999999999999999999 999986321
Q ss_pred -----------------------------------------ceeEeeEeccCcccEEEEEEecCCC---EEEEEeCCCeE
Q 017642 292 -----------------------------------------TLLQEVRRGADRAEIYSLAFSSNAQ---WLAVSSDKGTV 327 (368)
Q Consensus 292 -----------------------------------------~~~~~~~~~~~~~~v~~l~~sp~~~---~l~s~s~dg~i 327 (368)
..+..+.+ |...|.+|+|+|++. +|++|+.||.|
T Consensus 433 ~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~g--h~~~V~~Vafsp~~~~~~~lAsg~~~g~v 510 (524)
T 2j04_B 433 GIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDA--HGINITCTKWNETSAGGKCYAFSNSAGLL 510 (524)
T ss_dssp CC------CCCCEEEECBCCSSSCEEEECCCCCCCC---------------CCCSCCCEEECCSTTTTTEEEEECTTSEE
T ss_pred ccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecC--CCceEEEEECCCCCCccHHHHhhccCceE
Confidence 00111222 667899999999964 99999999999
Q ss_pred EEEEccC
Q 017642 328 HVFNLKV 334 (368)
Q Consensus 328 ~iwd~~~ 334 (368)
+||++.-
T Consensus 511 rlw~l~~ 517 (524)
T 2j04_B 511 TLEYLSL 517 (524)
T ss_dssp EEEECSC
T ss_pred EEEEccc
Confidence 9999853
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=9.9e-31 Score=249.18 Aligned_cols=240 Identities=14% Similarity=0.202 Sum_probs=207.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecCC----CcceEEEcccCCcee-EEEEEEeC--CeEEEEecCCCCCCCC
Q 017642 83 SPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDPF----REIFRRDFERGGGIG-VVEMLFRC--NILALVGGGPDPQYPL 155 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~s~~~d~~~~~ 155 (368)
.|.+.|.+++|+|+|++|++++++.|+||++++. +.. ..+. .|... +.++.|++ ++..+++++.|
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~--~~~~-~h~~~~v~~~~~sp~~~~~~l~s~~~d----- 87 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPV--VQFT-GHGSSVVTTVKFSPIKGSQYLCSGDES----- 87 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSE--EEEC-TTTTSCEEEEEECSSTTCCEEEEEETT-----
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccc--eEEe-cCCCceEEEEEECcCCCCCEEEEecCC-----
Confidence 6788999999999999999999989999999866 333 4554 78888 99999999 99999999887
Q ss_pred CcEEEEeCCCC--------cEEEEEe-cCCceeEEEEeeCccEEE---eC----CcEEEEEcCCCeEEEEEeccCCCeeE
Q 017642 156 NKVMIWDDHQS--------RCIGELS-FRSEVRSVKLRRDRIIVV---LE----QKIFVYNFADLKLLHQIETIANPKGL 219 (368)
Q Consensus 156 ~~i~vwd~~~~--------~~~~~~~-~~~~v~~~~~~~~~~~l~---~d----~~i~vwd~~~~~~~~~~~~~~~~v~~ 219 (368)
|.|++||+.++ +.+..+. |...|.+++|+|++.+++ .+ +.|++|| .++.+..+..|...+.+
T Consensus 88 g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 88 GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINA 165 (615)
T ss_dssp SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEE
T ss_pred CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEE
Confidence 99999999754 6666777 899999999999999888 23 5777777 67788889999999999
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCc---ceEEEEECCC-CCEEEEEeCCCcEEEEEECCCCcee
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDS---RIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLL 294 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~---~i~~v~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~ 294 (368)
++|+|+++..++ +++.|+.|++|+... +.+..+..|.. .|.+++|+|+ +++|++++.||. |++||+.+++.+
T Consensus 166 ~~~~~~~~~~l~--~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~~ 242 (615)
T 1pgu_A 166 CHLKQSRPMRSM--TVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEFL 242 (615)
T ss_dssp EEECSSSSCEEE--EEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCEE
T ss_pred EEECCCCCcEEE--EEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCEe
Confidence 999999985333 366899999988665 55667888998 9999999999 999999999999 999999999999
Q ss_pred Eee-E---eccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 295 QEV-R---RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 295 ~~~-~---~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
..+ . . |...|.+++|+ ++++|++++.|+.|++||+++++..
T Consensus 243 ~~~~~~~~~--~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 243 KYIEDDQEP--VQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp EECCBTTBC--CCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEecccccc--cCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 888 3 4 78899999999 9999999999999999999877644
No 78
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.1e-32 Score=247.29 Aligned_cols=249 Identities=12% Similarity=0.124 Sum_probs=202.6
Q ss_pred CcccccCCCCCEEEEEEcCC-CCEEEEEe-CCeEEEEEecCCC------cceEE-EcccCCceeEEEEEEeCC-eEEEEe
Q 017642 77 AESTSSSPPPTLLHISFNQD-HGCFAAGT-DHGFRIYNCDPFR------EIFRR-DFERGGGIGVVEMLFRCN-ILALVG 146 (368)
Q Consensus 77 ~~~~~~~h~~~v~~~~~s~~-g~~l~~~~-d~~i~iw~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~s 146 (368)
.......|...|++++|+|+ +++|++++ |+.|++||+...+ ..... .+. .|...+.++.|+++ ...+++
T Consensus 105 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~ 183 (416)
T 2pm9_A 105 SMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM-SSVDEVISLAWNQSLAHVFAS 183 (416)
T ss_dssp EEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC-CSSCCCCEEEECSSCTTEEEE
T ss_pred chhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc-CCCCCeeEEEeCCCCCcEEEE
Confidence 34455679999999999998 88999998 8889999998765 32221 222 67788899999998 677788
Q ss_pred cCCCCCCCCCcEEEEeCCCCcEEEEEe-c------CCceeEEEEeeCc-cEEE---eCC---cEEEEEcCCC-eEEEEEe
Q 017642 147 GGPDPQYPLNKVMIWDDHQSRCIGELS-F------RSEVRSVKLRRDR-IIVV---LEQ---KIFVYNFADL-KLLHQIE 211 (368)
Q Consensus 147 ~~~d~~~~~~~i~vwd~~~~~~~~~~~-~------~~~v~~~~~~~~~-~~l~---~d~---~i~vwd~~~~-~~~~~~~ 211 (368)
++.| +.|++||+++++.+..+. + ...|.+++|+|++ .+++ .|+ .|++||++++ +.+..+.
T Consensus 184 ~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~ 258 (416)
T 2pm9_A 184 AGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLN 258 (416)
T ss_dssp ESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCC
T ss_pred EcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEee
Confidence 7777 999999999999998887 4 7889999999997 4555 466 9999999986 6677777
Q ss_pred -ccCCCeeEEEEec-CCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCC-CEEEEEeCCCcEEEEEE
Q 017642 212 -TIANPKGLCAVSQ-GVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDG-QLLATSSTKGTLVRIFN 287 (368)
Q Consensus 212 -~~~~~v~~~~~~~-~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g-~~l~s~~~dg~~i~iwd 287 (368)
.|...+.+++|+| +++. +++ ++.||.|++|+... +.+..+..|...|.+++|+|++ .+|++++.||. |+|||
T Consensus 259 ~~~~~~v~~~~~s~~~~~~--l~s-~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~-i~iw~ 334 (416)
T 2pm9_A 259 QGHQKGILSLDWCHQDEHL--LLS-SGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNK-IEVQT 334 (416)
T ss_dssp SCCSSCEEEEEECSSCSSC--EEE-EESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSE-EEEEE
T ss_pred cCccCceeEEEeCCCCCCe--EEE-EeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCc-EEEEE
Confidence 8999999999999 6664 333 66899999988654 6677788999999999999999 89999999999 99999
Q ss_pred CCCCceeEeeEe---------------------------------ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 288 TLDGTLLQEVRR---------------------------------GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 288 ~~~~~~~~~~~~---------------------------------~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
+.+++....... ..+...+.+++|+|||++|++++.|+.|+||++.+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 335 LQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp SCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 987654322110 00455778999999999999999999999999986
Q ss_pred C
Q 017642 335 N 335 (368)
Q Consensus 335 ~ 335 (368)
.
T Consensus 415 ~ 415 (416)
T 2pm9_A 415 S 415 (416)
T ss_dssp C
T ss_pred C
Confidence 4
No 79
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.7e-30 Score=235.48 Aligned_cols=241 Identities=14% Similarity=0.179 Sum_probs=192.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEec---CCCcce--------EEEccc-CCceeEEEEE--EeCCeEEEEec
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCD---PFREIF--------RRDFER-GGGIGVVEML--FRCNILALVGG 147 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~---~~~~~~--------~~~~~~-~~~~~~~~~~--~~~~~~~~~s~ 147 (368)
.|...|++++|+|++++|++|+ |+.|++||++ .++... ...+.. .+...+.++. +++++..++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 5899999999999999999999 8889999995 332221 111110 0344455555 56788888888
Q ss_pred CCCCCCCCCcEEEEeCCCCcEEEEEe---cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEe-ccCCCeeEE
Q 017642 148 GPDPQYPLNKVMIWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE-TIANPKGLC 220 (368)
Q Consensus 148 ~~d~~~~~~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~ 220 (368)
+.| +.|++||+++++.+..+. |...|.+++|+|++.+++ .||.|++||+++++++..+. .+...|.++
T Consensus 189 ~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 189 TNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp ETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred eCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 887 999999999999998887 678999999999999888 58999999999999998886 677789999
Q ss_pred EEecC--CCeEEEEeecCCCCeEEEEecCc-ceeeeeec--------------------------cCcceEEEEECCCCC
Q 017642 221 AVSQG--VGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMA--------------------------HDSRIACFALTQDGQ 271 (368)
Q Consensus 221 ~~~~~--~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~--------------------------~~~~i~~v~~sp~g~ 271 (368)
+++|. .+..++++ |+.||.|++|+... +.+..+.+ |...|++++|+ +++
T Consensus 264 ~~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 264 EVCQFYGKNSVIVVG-GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EECTTTCTTEEEEEE-ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EeccccCCCccEEEE-EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 77764 23334554 78899999998864 43333332 66678999999 788
Q ss_pred EEEEEeCCCcEEEEEECCCCceeEeeEecc-----------------------------------CcccEEEEEEecC--
Q 017642 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------------------------------DRAEIYSLAFSSN-- 314 (368)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------------------------------~~~~v~~l~~sp~-- 314 (368)
+|++|+.||. |++||+.+++.+..+..+. |...|.+++|+++
T Consensus 342 ~l~s~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~ 420 (437)
T 3gre_A 342 ILLTDEATSS-IVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE 420 (437)
T ss_dssp EEEEEGGGTE-EEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred EEEecCCCCe-EEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence 9999999999 9999999998877776421 6789999999998
Q ss_pred CCEEEEEeCCCeEEEEE
Q 017642 315 AQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 315 ~~~l~s~s~dg~i~iwd 331 (368)
+.+|++|+.||.|+||+
T Consensus 421 ~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 421 TPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SEEEEEEETTSCEEEEC
T ss_pred ceEEEEEcCCceEEEeC
Confidence 77999999999999995
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=1.4e-29 Score=233.38 Aligned_cols=238 Identities=18% Similarity=0.268 Sum_probs=197.8
Q ss_pred ccccCCCCCE-EEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 79 STSSSPPPTL-LHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 79 ~~~~~h~~~v-~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.....|...| .++.+ ++++|++|+ |+.|++||+.+++.. ..+. +|...+.++.|++++ .+++++.| |
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~--~~~~-~h~~~V~~l~~~~~~-~l~s~s~d-----g 183 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL--LQLS-GHDGGVWALKYAHGG-ILVSGSTD-----R 183 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEECSTT-EEEEEETT-----S
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE--EEEe-CCCcCEEEEEEcCCC-EEEEEeCC-----C
Confidence 3556787775 66666 567999998 888999998876654 5564 789999999999888 66777776 9
Q ss_pred cEEEEeCCCCcEEEEEe-cCCceeEEEEee--CccEEE---eCCcEEEEEcCCCeE-----------------------E
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRR--DRIIVV---LEQKIFVYNFADLKL-----------------------L 207 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~--~~~~l~---~d~~i~vwd~~~~~~-----------------------~ 207 (368)
.|++||+.+++.+..+. |...|.+++|++ ++.+++ .|+.|++||+++++. +
T Consensus 184 ~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 263 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEE
T ss_pred CEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEE
Confidence 99999999999999998 999999999995 666666 599999999987652 4
Q ss_pred EEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEE
Q 017642 208 HQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (368)
Q Consensus 208 ~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iw 286 (368)
..+.+|...+.++ +++++. +++ |+.||.|++|+... +.+..+.+|...|.+++|+|++++|++|+.||. |++|
T Consensus 264 ~~~~~~~~~v~~~--~~~~~~--l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vw 337 (464)
T 3v7d_B 264 GVLRGHMASVRTV--SGHGNI--VVS-GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIW 337 (464)
T ss_dssp EEECCCSSCEEEE--EEETTE--EEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEE
T ss_pred EEccCccceEEEE--cCCCCE--EEE-EeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEE
Confidence 4556666666654 667764 343 66899999988654 666778899999999999999999999999999 9999
Q ss_pred ECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 287 NTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 287 d~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
|+++++.+..+.. |...|.++.|+ +++|++++.||.|++||+.+++.
T Consensus 338 d~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 338 DLENGELMYTLQG--HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp ETTTTEEEEEECC--CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred ECCCCcEEEEEeC--CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 9999999999987 78899999997 58999999999999999987654
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=4.7e-29 Score=229.91 Aligned_cols=239 Identities=16% Similarity=0.225 Sum_probs=198.9
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEe--CCeEEEEecCCCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYPLN 156 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~d~~~~~~ 156 (368)
....|...|.+++|++++ +|++|+ |+.|++||+++++.. ..+. .|...+.++.+. +++..+++++.| +
T Consensus 157 ~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d-----~ 227 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT--HVFE-GHNSTVRCLDIVEYKNIKYIVTGSRD-----N 227 (464)
T ss_dssp EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEEESSSCEEEEEEETT-----S
T ss_pred EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE--EEEC-CCCCccEEEEEecCCCCCEEEEEcCC-----C
Confidence 345799999999999988 788888 888999999876654 4454 677777777776 677888888887 9
Q ss_pred cEEEEeCCCCcE-----------------------EEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEE
Q 017642 157 KVMIWDDHQSRC-----------------------IGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQ 209 (368)
Q Consensus 157 ~i~vwd~~~~~~-----------------------~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~ 209 (368)
.|++||+.+++. +..+. |...|.++ ++++.+++ .|+.|++||+++++++..
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 305 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYI 305 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 999999987753 33344 67777776 56666666 599999999999999999
Q ss_pred EeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 210 IETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 210 ~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
+.+|...+.+++|+++++. +++ |+.||.|++|+.. ++.+..+.+|...|.+++|+ +++|++++.||. |++||+
T Consensus 306 ~~~~~~~v~~~~~~~~~~~--l~s-g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~ 379 (464)
T 3v7d_B 306 LSGHTDRIYSTIYDHERKR--CIS-ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDA 379 (464)
T ss_dssp ECCCSSCEEEEEEETTTTE--EEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEET
T ss_pred ecCCCCCEEEEEEcCCCCE--EEE-EeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEEC
Confidence 9999999999999999985 333 6789999998874 57777889999999999997 579999999999 999999
Q ss_pred CCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 289 LDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
.+++....+. +...+..++|++++++|++++ ||.|++||+++++...
T Consensus 380 ~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 380 NDYSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVH 426 (464)
T ss_dssp TTCCEEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEE
T ss_pred CCCceeeeec---CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEe
Confidence 9988776664 456788899999999999998 8999999999987654
No 82
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=6.4e-31 Score=235.73 Aligned_cols=241 Identities=10% Similarity=0.058 Sum_probs=182.4
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCC-cceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFR-EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
....|...|.+++|+|++++|++++ |+.|++||+...+ ......+. .|...+.++.|++++..+++++.| +.
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-----~~ 123 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKFAVGSGA-----RV 123 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECC-CCSSCEEEEECCTTSSCCEEEESS-----SC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEec-ccCCceEEEEECCCCCEEEEEecC-----Ce
Confidence 4457999999999999999999999 8889999998766 22334454 788899999999999888888887 99
Q ss_pred EEEEeCCCCc---EEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEcC------------------CCeEEEEEe
Q 017642 158 VMIWDDHQSR---CIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFA------------------DLKLLHQIE 211 (368)
Q Consensus 158 i~vwd~~~~~---~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~------------------~~~~~~~~~ 211 (368)
|++||+++++ ....+. |...|.+++|+|++.+++ .|+.|++||++ .++++..+
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 9999999886 355665 899999999999998888 58999999995 35566666
Q ss_pred ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc-e----eeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEE
Q 017642 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-R----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIF 286 (368)
Q Consensus 212 ~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~----~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iw 286 (368)
.|...+.+++|+|+++. +++ |+.||.|++|+.... . +..+..|...|.+++|+|++++|++++.++. .+|
T Consensus 203 ~~~~~v~~~~~sp~~~~--l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~--~~~ 277 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNA--LAY-AGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP--ILL 277 (377)
T ss_dssp CCSSSEEEEEECTTSSC--EEE-EETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE--EEE
T ss_pred cCCceEEEEEECCCCCE--EEE-EeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE--EEE
Confidence 88899999999999985 443 668999999887653 3 5778899999999999999999999987765 577
Q ss_pred ECCCCc--e-------------------------e---------EeeE--------------eccCcccEEEEEEecCC-
Q 017642 287 NTLDGT--L-------------------------L---------QEVR--------------RGADRAEIYSLAFSSNA- 315 (368)
Q Consensus 287 d~~~~~--~-------------------------~---------~~~~--------------~~~~~~~v~~l~~sp~~- 315 (368)
+..... . . ..+. ...|...|+++.+.+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~ 357 (377)
T 3dwl_C 278 QGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTP 357 (377)
T ss_dssp CCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEET
T ss_pred EeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCC
Confidence 664211 0 0 0000 01177899999976543
Q ss_pred C---EEEEEeCCCeEEEEEc
Q 017642 316 Q---WLAVSSDKGTVHVFNL 332 (368)
Q Consensus 316 ~---~l~s~s~dg~i~iwd~ 332 (368)
. .|++++.||.|+|||+
T Consensus 358 ~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 358 GNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp TEEEEEEEEETTSEEEEECC
T ss_pred CceEEEEeecCCCcEEEecC
Confidence 3 6999999999999986
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=2.8e-29 Score=227.14 Aligned_cols=238 Identities=13% Similarity=0.099 Sum_probs=195.6
Q ss_pred CCCCC--EEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 83 SPPPT--LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 83 ~h~~~--v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
.|... +.++.|++ +.+++++.|+.|++|++.+++....... .+...+.++.|++++..+++++.| |.|++
T Consensus 89 ~~~~~~~~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~--~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~i 160 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAET--DESTYVASVKWSHDGSFLSVGLGN-----GLVDI 160 (401)
T ss_dssp TCCCCTTCBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEEC--CTTCCEEEEEECTTSSEEEEEETT-----SCEEE
T ss_pred CCcCCceEEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeec--CCCCCEEEEEECCCCCEEEEECCC-----CeEEE
Confidence 44443 55577775 3455555599999999988776544333 578889999999999888888887 99999
Q ss_pred EeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcC-CCeEEEEEeccCCCeeEEEEecCCCeEEEEeec
Q 017642 161 WDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 161 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
||+.+++.+..+. |...|.+++|++ .+++ .|+.|++||++ .+..+..+..|...+.+++|+++++. +++ |
T Consensus 161 wd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~s-~ 235 (401)
T 4aez_A 161 YDVESQTKLRTMAGHQARVGCLSWNR--HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ--LAS-G 235 (401)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-E
T ss_pred EECcCCeEEEEecCCCCceEEEEECC--CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE--EEE-E
Confidence 9999999999997 999999999954 4444 69999999998 56778888899999999999999875 443 6
Q ss_pred CCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCC-EEEEEe--CCCcEEEEEECCCCceeEeeEeccCcccEEEEEE
Q 017642 236 LQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQ-LLATSS--TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF 311 (368)
Q Consensus 236 ~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~-~l~s~~--~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 311 (368)
+.|+.|++|+... ..+..+..|...|.+++|+|++. ++++++ .|+. |++||+.+++.+..+. +...|.+++|
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~---~~~~v~~~~~ 311 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVD---AGSQVTSLIW 311 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEE
T ss_pred eCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEe---CCCcEEEEEE
Confidence 6899999988765 55667788999999999999775 666655 7999 9999999999998886 4568999999
Q ss_pred ecCCCEEEEE--eCCCeEEEEEccCCCC
Q 017642 312 SSNAQWLAVS--SDKGTVHVFNLKVNSG 337 (368)
Q Consensus 312 sp~~~~l~s~--s~dg~i~iwd~~~~~~ 337 (368)
+|++++|+++ +.||.|++||+.+++.
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGL 339 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEE
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCccc
Confidence 9999999985 4899999999988543
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=231.12 Aligned_cols=237 Identities=8% Similarity=0.081 Sum_probs=194.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEecCCC---cceEEEcc-------------------------------------
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFR---EIFRRDFE------------------------------------- 125 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~---~~~~~~~~------------------------------------- 125 (368)
.++.+++|+++|++|+++.++.|++||+.+++ ........
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 47889999999998888888899999998877 22111100
Q ss_pred --------------cCCceeEEEEEEeCCeEEE-EecCCCCCCCCCcEEEEeCC--CCcEEEEEe---cCCceeEEEEee
Q 017642 126 --------------RGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKVMIWDDH--QSRCIGELS---FRSEVRSVKLRR 185 (368)
Q Consensus 126 --------------~~~~~~~~~~~~~~~~~~~-~s~~~d~~~~~~~i~vwd~~--~~~~~~~~~---~~~~v~~~~~~~ 185 (368)
..+...+.++.|++++..+ ++++.| +.|++||+. +++.+..+. +...|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 0122258999999998875 777777 999999999 888888774 678999999999
Q ss_pred CccEEE---eCCcEEEEEcCCCeEEE----EEeccCCCeeEEEEecC---CCeEEEEeecCCCCeEEEEecCc-ceeee-
Q 017642 186 DRIIVV---LEQKIFVYNFADLKLLH----QIETIANPKGLCAVSQG---VGSLVLVCPGLQKGQVRVEHYAS-KRTKF- 253 (368)
Q Consensus 186 ~~~~l~---~d~~i~vwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~~l~~~g~~dg~i~i~~~~~-~~~~~- 253 (368)
++.+++ .++.|++|++.+++... .+.+|...+.+++|+|+ ++. +++ |+.|+.|++|+... ..+..
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~--l~s-~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQF--IIT-SDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEE--EEE-EETTSCEEEEEESCTTCEEEE
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcE--EEE-EcCCCcEEEEECCCCceeeee
Confidence 998888 47999999998876544 67789999999999999 653 443 67899999998765 44444
Q ss_pred eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec-----------------------cCcccEEEEE
Q 017642 254 IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-----------------------ADRAEIYSLA 310 (368)
Q Consensus 254 ~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~l~ 310 (368)
+.+|...|.+++|+ ++++|++++.|+. |+|||+.+++.+..+..+ .....|.+++
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 56899999999999 9999999999999 999999999988887632 1235689999
Q ss_pred EecCCCEEEEEe-CCCeEEEEEc
Q 017642 311 FSSNAQWLAVSS-DKGTVHVFNL 332 (368)
Q Consensus 311 ~sp~~~~l~s~s-~dg~i~iwd~ 332 (368)
|+|++++|++++ .|+.|+||++
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEe
Confidence 999999999998 8999999999
No 85
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.4e-29 Score=231.67 Aligned_cols=235 Identities=14% Similarity=0.303 Sum_probs=190.1
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++| ++++|++|+ |+.|++||+.+++.. ..+. .|...+.++.++++ .+++++.| +.
T Consensus 167 ~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~l~~~~~--~l~s~s~d-----g~ 234 (435)
T 1p22_A 167 RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML--NTLI-HHCEAVLHLRFNNG--MMVTCSKD-----RS 234 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE--EEEC-CCCSCEEEEECCTT--EEEEEETT-----SC
T ss_pred EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE--EEEc-CCCCcEEEEEEcCC--EEEEeeCC-----Cc
Confidence 445679999999999 788999999 888999999877654 4454 78888999999866 45555666 99
Q ss_pred EEEEeCCCCcEE---EEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEE
Q 017642 158 VMIWDDHQSRCI---GELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 158 i~vwd~~~~~~~---~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (368)
|++||+.+++.. ..+. |...|.++++ ++.+++ .|+.|++||+++++.+..+..|...+.++.+. ++ +
T Consensus 235 i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~--~ 308 (435)
T 1p22_A 235 IAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DR--L 308 (435)
T ss_dssp EEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TT--E
T ss_pred EEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CC--E
Confidence 999999887654 4444 8899999999 455555 58999999999999999999999999988884 44 3
Q ss_pred EEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCc---------eeEeeEec
Q 017642 231 LVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT---------LLQEVRRG 300 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~---------~~~~~~~~ 300 (368)
+++ |+.||.|++|+.. +..+..+.+|...|.+++| ++++|++|+.||. |++||+.+++ .+..+..
T Consensus 309 l~~-g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~- 383 (435)
T 1p22_A 309 VVS-GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTLVE- 383 (435)
T ss_dssp EEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEECC-
T ss_pred EEE-EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeeccC-
Confidence 443 6789999998876 5677788999999999999 7889999999999 9999998766 7777776
Q ss_pred cCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 301 ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 301 ~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
|.+.|.+++| ++.+|++++.||.|++||+.+.....
T Consensus 384 -h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 384 -HSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp -CSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred -CCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 7889999999 78899999999999999998876543
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=7.2e-29 Score=226.92 Aligned_cols=232 Identities=15% Similarity=0.300 Sum_probs=193.8
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
...|...|+++.| ++++|++|+ |+.|++||+.+++.. ..+. +|...+.++.++ +..+++++.| |.|+
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~--~~~~-~h~~~v~~l~~~--~~~l~sg~~d-----g~i~ 196 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK--RILT-GHTGSVLCLQYD--ERVIITGSSD-----STVR 196 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE--EEEC-CCSSCEEEEECC--SSEEEEEETT-----SCEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEE--EEEc-CCCCcEEEEEEC--CCEEEEEcCC-----CeEE
Confidence 3467778999887 789999999 888999999876654 4454 788889999994 4466666666 9999
Q ss_pred EEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEE---EEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLL---HQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 160 vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
+||+.+++.+..+. |...|.+++|+++ .++. .|+.|++||+++++.. ..+.+|...+.++++ +++. +++
T Consensus 197 vwd~~~~~~~~~~~~h~~~v~~l~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~s 271 (435)
T 1p22_A 197 VWDVNTGEMLNTLIHHCEAVLHLRFNNG-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKY--IVS 271 (435)
T ss_dssp EEESSSCCEEEEECCCCSCEEEEECCTT-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTE--EEE
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEEcCC-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCE--EEE
Confidence 99999999999998 9999999999754 3333 6999999999887654 667788889998888 5553 443
Q ss_pred ecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEe
Q 017642 234 PGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFS 312 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 312 (368)
|+.||.|++|+... +.+..+.+|...|.++.| ++++|++|+.||. |++||+++++.+..+.. |...|.+++|
T Consensus 272 -~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~- 344 (435)
T 1p22_A 272 -ASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLEG--HEELVRCIRF- 344 (435)
T ss_dssp -EETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECC--CSSCEEEEEC-
T ss_pred -EeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEeC--CcCcEEEEEe-
Confidence 66899999988654 667778899999999999 5789999999999 99999999999999987 7889999999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 313 SNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 313 p~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
++.+|++|+.||.|++||+.+++.
T Consensus 345 -~~~~l~sg~~dg~i~vwd~~~~~~ 368 (435)
T 1p22_A 345 -DNKRIVSGAYDGKIKVWDLVAALD 368 (435)
T ss_dssp -CSSEEEEEETTSCEEEEEHHHHTS
T ss_pred -cCCEEEEEeCCCcEEEEECCCCCC
Confidence 789999999999999999987763
No 87
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.3e-28 Score=209.69 Aligned_cols=241 Identities=11% Similarity=0.094 Sum_probs=167.6
Q ss_pred CEEEEEEcCCCC---EEEEEeCCeEEEEEecCC---CcceEEEcc----------------------cCCceeEEEEEEe
Q 017642 87 TLLHISFNQDHG---CFAAGTDHGFRIYNCDPF---REIFRRDFE----------------------RGGGIGVVEMLFR 138 (368)
Q Consensus 87 ~v~~~~~s~~g~---~l~~~~d~~i~iw~~~~~---~~~~~~~~~----------------------~~~~~~~~~~~~~ 138 (368)
.+.++-|-..|- .++++++..|++|+.... +....-.+. +-+...+..++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 567777765544 778888999999999876 222221111 1122245566666
Q ss_pred CC----eEEEEecCCCC---------------CCCCCcEEEEeC-CCCcEEEEEe-cCCceeEEEEee---CccEEE---
Q 017642 139 CN----ILALVGGGPDP---------------QYPLNKVMIWDD-HQSRCIGELS-FRSEVRSVKLRR---DRIIVV--- 191 (368)
Q Consensus 139 ~~----~~~~~s~~~d~---------------~~~~~~i~vwd~-~~~~~~~~~~-~~~~v~~~~~~~---~~~~l~--- 191 (368)
++ +..+++++.+. ...++.|++|++ .+|+.+..+. |...+..++|++ ++.+++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS 200 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTT 200 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEec
Confidence 77 55555543210 012488999998 4577777776 888888889988 668888
Q ss_pred eCCcEEEEEcCCCeEEEEEeccCC---CeeEEEEecCCCeEEE---------EeecCCCCeEEEEecCccee-eee----
Q 017642 192 LEQKIFVYNFADLKLLHQIETIAN---PKGLCAVSQGVGSLVL---------VCPGLQKGQVRVEHYASKRT-KFI---- 254 (368)
Q Consensus 192 ~d~~i~vwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~l---------~~~g~~dg~i~i~~~~~~~~-~~~---- 254 (368)
.|++|+|||+++|++++++.++.. .+.+++|+|+|..++. +.+|+.|++|++|+...... ..+
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence 599999999999999999976543 4566789999875432 23588999999998776543 222
Q ss_pred -eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCccc-EEEEEEecCCCEEEEEeCCCeEEEEEc
Q 017642 255 -MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE-IYSLAFSSNAQWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 255 -~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~-v~~l~~sp~~~~l~s~s~dg~i~iwd~ 332 (368)
.+|...+.+..+ ++.++++++.|++ |+|||+.+++++.++.+ |... +..++|+|||++|++|+.|++|+|||+
T Consensus 281 p~Gh~~~~lsg~~--sg~~lASgS~DgT-IkIWDl~tGk~l~tL~g--H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 281 PPGQAGRFLEGDV--KDHCAAAILTSGT-IAIWDLLLGQCTALLPP--VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CTTCCCCEEEEEE--ETTEEEEEETTSC-EEEEETTTCSEEEEECC--C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cCCCcceeEcccc--CCCEEEEEcCCCc-EEEEECCCCcEEEEecC--CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 356655554444 4789999999999 99999999999999987 5444 446899999999999999999999996
No 88
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.1e-29 Score=226.92 Aligned_cols=240 Identities=11% Similarity=0.131 Sum_probs=193.1
Q ss_pred EEEEEEcCCCCEEEE-Ee-CCeEEEEEecCCCcc--eEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEe
Q 017642 88 LLHISFNQDHGCFAA-GT-DHGFRIYNCDPFREI--FRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 88 v~~~~~s~~g~~l~~-~~-d~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
...++++|+...++. ++ ++.|+||++...... ....+. +|...+.++.|++ ++..+++++.| |.|++||
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~p~~~~~l~s~s~d-----g~v~vw~ 110 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVC-GHTAPVLDIAWCPHNDNVIASGSED-----CTVMVWE 110 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBC-CCSSCEEEEEECTTCTTEEEEEETT-----SEEEEEE
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEe-cCCCCEEEEEeCCCCCCEEEEEeCC-----CeEEEEE
Confidence 345789988765543 45 778999998654321 112343 7889999999999 88888888887 9999999
Q ss_pred CCCC-------cEEEEEe-cCCceeEEEEeeCc-cEEE---eCCcEEEEEcCCCeEEEEE--eccCCCeeEEEEecCCCe
Q 017642 163 DHQS-------RCIGELS-FRSEVRSVKLRRDR-IIVV---LEQKIFVYNFADLKLLHQI--ETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 163 ~~~~-------~~~~~~~-~~~~v~~~~~~~~~-~~l~---~d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~ 228 (368)
+.++ +.+..+. |...|.+++|+|++ .+++ .|+.|++||+++++.+..+ ..|...+.+++|+++++.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGAL 190 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSC
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCE
Confidence 9987 5677777 99999999999998 4665 5899999999999999999 789999999999999985
Q ss_pred EEEEeecCCCCeEEEEecCc-ceeeee-eccCcc-eEEEEECCCCCEEEEE---eCCCcEEEEEECCCCceeEeeEeccC
Q 017642 229 LVLVCPGLQKGQVRVEHYAS-KRTKFI-MAHDSR-IACFALTQDGQLLATS---STKGTLVRIFNTLDGTLLQEVRRGAD 302 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~-~~~~~~-~~~~~~-i~~v~~sp~g~~l~s~---~~dg~~i~iwd~~~~~~~~~~~~~~~ 302 (368)
+++ ++.||.|++|+... +.+..+ ..|.+. +.++.|+|++++|++| +.|+. |++||+++++.........+
T Consensus 191 --l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~~~ 266 (402)
T 2aq5_A 191 --ICT-SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQELDT 266 (402)
T ss_dssp --EEE-EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEECCC
T ss_pred --EEE-EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEeccC
Confidence 333 56899999988665 555566 678765 8999999999999999 78999 99999998765222222225
Q ss_pred cccEEEEEEecCCCEEEE-EeCCCeEEEEEccCCCC
Q 017642 303 RAEIYSLAFSSNAQWLAV-SSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 303 ~~~v~~l~~sp~~~~l~s-~s~dg~i~iwd~~~~~~ 337 (368)
...+.+++|+|++++|++ ++.||.|++||+.+++.
T Consensus 267 ~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 267 SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 678999999999999865 55799999999998764
No 89
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.6e-29 Score=246.06 Aligned_cols=239 Identities=10% Similarity=0.087 Sum_probs=191.0
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
..+|...|++++|+|+|++||+|+ |+.|+||+....+.. ..+ .+...|.++.|++ +..+++++.| +.|+
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~--~~~--~~~~~V~~l~fsp-g~~L~S~s~D-----~~v~ 82 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV--IKL--EDRSAIKEMRFVK-GIYLVVINAK-----DTVY 82 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE--EEC--SSCCCEEEEEEET-TTEEEEEETT-----CEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE--EEc--CCCCCEEEEEEcC-CCEEEEEECc-----CeEE
Confidence 457899999999999999999999 888999997654432 333 5677899999999 5578888877 9999
Q ss_pred EEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEE-----------EEEeccCCCeeEEEEecC
Q 017642 160 IWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLL-----------HQIETIANPKGLCAVSQG 225 (368)
Q Consensus 160 vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~-----------~~~~~~~~~v~~~~~~~~ 225 (368)
+||+.+++++..+.+...|++++|+|++.+++ .||.|++||++++++. ..+.+|...|.+++|+|+
T Consensus 83 lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 83 VLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp EEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 99999999999999889999999999999888 5999999999988764 223557889999999997
Q ss_pred CCeEEEEeecCCCCeEEEEecCcc-eeeeeecc------------------CcceEEEEECCCCCEEEEEeCCCcEEEEE
Q 017642 226 VGSLVLVCPGLQKGQVRVEHYASK-RTKFIMAH------------------DSRIACFALTQDGQLLATSSTKGTLVRIF 286 (368)
Q Consensus 226 ~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~~------------------~~~i~~v~~sp~g~~l~s~~~dg~~i~iw 286 (368)
+... +++ |+.||.| +|+.... .+..+..| ...|++++|+|+|++|++++.||. |+||
T Consensus 163 ~~~~-l~~-g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lW 238 (902)
T 2oaj_A 163 DIGT-VLI-SYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFW 238 (902)
T ss_dssp EEEE-EEE-ECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEE
T ss_pred CCCE-EEE-EeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEE
Confidence 6443 333 6789999 9987664 34445444 577999999999999999999999 9999
Q ss_pred ECCCCceeEe--eE---ec-----------cCcccEEEEEEec----CC-CEEEEEeCC-----CeEEEEEcc
Q 017642 287 NTLDGTLLQE--VR---RG-----------ADRAEIYSLAFSS----NA-QWLAVSSDK-----GTVHVFNLK 333 (368)
Q Consensus 287 d~~~~~~~~~--~~---~~-----------~~~~~v~~l~~sp----~~-~~l~s~s~d-----g~i~iwd~~ 333 (368)
|+++++++.. +. .+ .|...|.+++|++ ++ .+|++|+.| ..|++|++.
T Consensus 239 d~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~ 311 (902)
T 2oaj_A 239 DANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLG 311 (902)
T ss_dssp ETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEE
T ss_pred ECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecC
Confidence 9999987653 21 11 1345799999964 43 567777665 379999863
No 90
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=3.3e-29 Score=217.40 Aligned_cols=199 Identities=12% Similarity=0.164 Sum_probs=168.7
Q ss_pred CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC--CcEEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEE
Q 017642 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ--SRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFV 198 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~--~~~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~v 198 (368)
+|...|.+++|++++..+++++.| +.|++||+.. ++.+..+. |.+.|.+++|+++ +.+++ .|++|++
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 788899999999999999999988 9999999874 36677777 9999999999863 77777 5999999
Q ss_pred EEcCCCe--EEEEEeccCCCeeEEEEecC--CCeEEEEeecCCCCeEEEEecCcc---eeeeeeccCcceEEEEECCC--
Q 017642 199 YNFADLK--LLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQD-- 269 (368)
Q Consensus 199 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~v~~sp~-- 269 (368)
||+++++ .+..+..|...|.+++|+|+ +. ++++ |+.|+.|++|+.... ....+.+|...|.+++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~--~l~s-~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP--MLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS--EEEE-EETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCc--EEEE-EECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 9998874 55667788999999999998 54 3443 678999999987653 23567789999999999997
Q ss_pred -----------CCEEEEEeCCCcEEEEEECCCCc----eeEeeEeccCcccEEEEEEecCC---CEEEEEeCCCeEEEEE
Q 017642 270 -----------GQLLATSSTKGTLVRIFNTLDGT----LLQEVRRGADRAEIYSLAFSSNA---QWLAVSSDKGTVHVFN 331 (368)
Q Consensus 270 -----------g~~l~s~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~sp~~---~~l~s~s~dg~i~iwd 331 (368)
+++|++|+.|+. |+|||+++++ ....+.+ |...|.+++|+|++ .+|++++.|++|+|||
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp -----------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 579999999999 9999998776 4556666 78899999999985 8999999999999999
Q ss_pred ccCCC
Q 017642 332 LKVNS 336 (368)
Q Consensus 332 ~~~~~ 336 (368)
+++..
T Consensus 236 ~~~~~ 240 (297)
T 2pm7_B 236 QDNEQ 240 (297)
T ss_dssp ESSTT
T ss_pred eCCCC
Confidence 98753
No 91
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=9.8e-30 Score=261.16 Aligned_cols=246 Identities=17% Similarity=0.273 Sum_probs=214.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
.+...|.+++|+|+|+++++|+ ++.|++|++.+.... ..+. .|...+.++.|++++..+++++.| +.|++|
T Consensus 959 ~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~--~~~~-~h~~~v~~l~~s~dg~~l~s~~~d-----g~i~vw 1030 (1249)
T 3sfz_A 959 LPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVF--SSGV-GHKKAVRHIQFTADGKTLISSSED-----SVIQVW 1030 (1249)
T ss_dssp ECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCE--EECC-CCSSCCCCEEECSSSSCEEEECSS-----SBEEEE
T ss_pred cccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCcee--eecc-cCCCceEEEEECCCCCEEEEEcCC-----CEEEEE
Confidence 3466899999999999999999 777999999876654 4454 788889999999999999999988 999999
Q ss_pred eCCCCcEEEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCC
Q 017642 162 DDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (368)
Q Consensus 162 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg 239 (368)
|+.+++......|...|.++.|++++.+++ .|+.|++||+.+++.+..+..|...+.+++|+|+++.+ ++ ++.||
T Consensus 1031 d~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l--~s-~s~d~ 1107 (1249)
T 3sfz_A 1031 NWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKF--SS-TSADK 1107 (1249)
T ss_dssp ETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSC--EE-ECCSS
T ss_pred ECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEE--EE-EcCCC
Confidence 999998876666999999999999998877 69999999999999999999999999999999999863 33 66899
Q ss_pred eEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEee---------EeccCcccEEEE
Q 017642 240 QVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV---------RRGADRAEIYSL 309 (368)
Q Consensus 240 ~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~---------~~~~~~~~v~~l 309 (368)
.|++|+... ..+..+.+|...|++++|+|+|++|++++.||. |++||+.+++.+..+ .. |.+.|.++
T Consensus 1108 ~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~l 1184 (1249)
T 3sfz_A 1108 TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE-IRIWNVSDGQLLHSCAPISVEEGTAT--HGGWVTDV 1184 (1249)
T ss_dssp CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-CCEEESSSSCCCCCCCCCC---------CCSCCCEE
T ss_pred cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-EEEEECCCCceEEEeccccccccccc--cCceEEEE
Confidence 999988764 566778899999999999999999999999999 999999999887665 33 77889999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCCCCCCC
Q 017642 310 AFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSEPR 344 (368)
Q Consensus 310 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~ 344 (368)
+|+|||++|++++ |.|++||+.+++.......+
T Consensus 1185 ~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~ 1217 (1249)
T 3sfz_A 1185 CFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTN 1217 (1249)
T ss_dssp EECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCS
T ss_pred EECCCCCEEEECC--CeEEEEECCCCceeeeeecc
Confidence 9999999999885 89999999998876554433
No 92
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=5.4e-29 Score=219.99 Aligned_cols=234 Identities=12% Similarity=0.129 Sum_probs=192.4
Q ss_pred cccCCCCCEEEEEEcCCCC-EEEEEe-CCeEEEEEe-cCCCcceEEEcccC--CceeEEEEEEeCCeEEEEecCCCCCCC
Q 017642 80 TSSSPPPTLLHISFNQDHG-CFAAGT-DHGFRIYNC-DPFREIFRRDFERG--GGIGVVEMLFRCNILALVGGGPDPQYP 154 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~-~l~~~~-d~~i~iw~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~d~~~~ 154 (368)
....|...|++++|+|+++ +|++|+ |+.|++|++ ..... ..+. . |...+.++.|++ +..+++++.|
T Consensus 51 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~---~~~~-~~~~~~~v~~l~~~~-~~~l~s~~~d---- 121 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF---QALT-NNEANLGICRICKYG-DDKLIAASWD---- 121 (342)
T ss_dssp EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE---EECB-SCCCCSCEEEEEEET-TTEEEEEETT----
T ss_pred eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce---Eecc-ccCCCCceEEEEeCC-CCEEEEEcCC----
Confidence 3447899999999999999 999998 888999998 76543 3443 6 888899999998 7777777777
Q ss_pred CCcEEEEeCCC---------CcEEEEEecCCceeEEEEeeCccEEE-eCCcEEEEEcCC-CeE--EEEEeccCCCeeEEE
Q 017642 155 LNKVMIWDDHQ---------SRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFAD-LKL--LHQIETIANPKGLCA 221 (368)
Q Consensus 155 ~~~i~vwd~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~-~~~--~~~~~~~~~~v~~~~ 221 (368)
+.|++||+.+ ++++..+.+...|.+++|++++.+++ .|+.|++||+++ +.. ......+...+.+++
T Consensus 122 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~ 200 (342)
T 1yfq_A 122 -GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVA 200 (342)
T ss_dssp -SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEE
T ss_pred -CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEE
Confidence 9999999987 77666777899999999999983223 689999999988 542 334446778899999
Q ss_pred Eec-CCCeEEEEeecCCCCeEEEEecCc-------ceeeeeeccCc---------ceEEEEECCCCCEEEEEeCCCcEEE
Q 017642 222 VSQ-GVGSLVLVCPGLQKGQVRVEHYAS-------KRTKFIMAHDS---------RIACFALTQDGQLLATSSTKGTLVR 284 (368)
Q Consensus 222 ~~~-~~~~~~l~~~g~~dg~i~i~~~~~-------~~~~~~~~~~~---------~i~~v~~sp~g~~l~s~~~dg~~i~ 284 (368)
|++ +++. +++ |+.||.|++|+... .....+..|.. .|.+++|+|++++|++++.||. |+
T Consensus 201 ~~~~~~~~--l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~ 276 (342)
T 1yfq_A 201 LLPKEQEG--YAC-SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-IS 276 (342)
T ss_dssp ECSGGGCE--EEE-EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EE
T ss_pred ECCCCCCE--EEE-EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EE
Confidence 999 8875 333 56799999987654 44556677755 9999999999999999999999 99
Q ss_pred EEECCCCceeEeeEeccC-cccEEEEEEecCCCEEEEEeCCCe-EEEEE
Q 017642 285 IFNTLDGTLLQEVRRGAD-RAEIYSLAFSSNAQWLAVSSDKGT-VHVFN 331 (368)
Q Consensus 285 iwd~~~~~~~~~~~~~~~-~~~v~~l~~sp~~~~l~s~s~dg~-i~iwd 331 (368)
+||+.+++.+..+.. | ...|.+++ |++++|++++.||. .+.|.
T Consensus 277 vwd~~~~~~~~~~~~--~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 277 CWNLQTRKKIKNFAK--FNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEETTTTEEEEECCC--CSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred EEcCccHhHhhhhhc--ccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 999999999988887 5 88999999 99999999999998 44444
No 93
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=9.3e-28 Score=220.16 Aligned_cols=237 Identities=16% Similarity=0.271 Sum_probs=196.3
Q ss_pred ccccCCCCCE-EEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 79 STSSSPPPTL-LHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 79 ~~~~~h~~~v-~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.....|.+.| .+ ++++|++|++|+ |+.|++||+.+++.. ..+. +|...+.++.++++ .+++++.| |
T Consensus 112 ~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~--~l~s~~~d-----g 179 (445)
T 2ovr_B 112 KVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCL--RTLV-GHTGGVWSSQMRDN--IIISGSTD-----R 179 (445)
T ss_dssp EEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEE--EECC-CCSSCEEEEEEETT--EEEEEETT-----S
T ss_pred EEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEE--EEEc-CCCCCEEEEEecCC--EEEEEeCC-----C
Confidence 4556788865 55 455689999999 888999999876654 5565 78889999999865 45555665 9
Q ss_pred cEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEee
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 234 (368)
.|++||+.+++.+..+. |...|.++.++++....+ .|+.|++||+++++.+..+..|...+.++.+ +++. +++
T Consensus 180 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~~- 254 (445)
T 2ovr_B 180 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRR--VVS- 254 (445)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSC--EEE-
T ss_pred eEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCE--EEE-
Confidence 99999999999999988 999999999975432222 6999999999999999999999999999888 5654 343
Q ss_pred cCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 235 GLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 235 g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
|+.||.|++|+... ..+..+.+|...|.+++| ++.+|++++.||. |++||+++++.+..+.. |...+.++.++
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~~v~~~~~~- 328 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTG--HQSLTSGMELK- 328 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECC--CCSCEEEEEEE-
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcC--CcccEEEEEEe-
Confidence 66899999988654 566778899999999999 8899999999999 99999999999988887 77788888774
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 314 NAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 314 ~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
+++|++++.||.|++||+++++...
T Consensus 329 -~~~l~~~~~dg~i~vwd~~~~~~~~ 353 (445)
T 2ovr_B 329 -DNILVSGNADSTVKIWDIKTGQCLQ 353 (445)
T ss_dssp -TTEEEEEETTSCEEEEETTTCCEEE
T ss_pred -CCEEEEEeCCCeEEEEECCCCcEEE
Confidence 6799999999999999998876543
No 94
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.6e-29 Score=219.23 Aligned_cols=228 Identities=9% Similarity=0.049 Sum_probs=174.9
Q ss_pred EEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC------
Q 017642 92 SFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH------ 164 (368)
Q Consensus 92 ~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~------ 164 (368)
.+.+++.+|++|+ |+.|++||+++++...... ...+..+.+++. +++++.| +.|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~~~~---~~s~s~D-----~~i~~w~~~~~~~~~ 109 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGEHPA---IISRGPC-----NRLLLLYPGNQITIL 109 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCCCCS---EEEECST-----TEEEEEETTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeeeCCc---eEEecCC-----CeEEEEEccCceEEe
Confidence 4456788999999 8899999998776653322 233445556666 6777777 999999654
Q ss_pred ---CCcEEEEEe--cCCceeEEEEee--CccEEE---eCCcEEEEEcCCCeEEEEEec-cCCCeeEEEEecCCCeEEEEe
Q 017642 165 ---QSRCIGELS--FRSEVRSVKLRR--DRIIVV---LEQKIFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 165 ---~~~~~~~~~--~~~~v~~~~~~~--~~~~l~---~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~ 233 (368)
+++.+..+. |.+.|.+++|+| ++.+++ .|+.|++||+++++.+..... +...+.+++|+|++.. +++
T Consensus 110 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~--las 187 (343)
T 3lrv_A 110 DSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL--LAL 187 (343)
T ss_dssp ETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE--EEE
T ss_pred ecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE--EEE
Confidence 555565555 668899999999 998888 599999999999988776643 4557999999999974 443
Q ss_pred ecCCCCeEEEEecCcce-e-eeeec-cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc-CcccE--E
Q 017642 234 PGLQKGQVRVEHYASKR-T-KFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA-DRAEI--Y 307 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~~~-~-~~~~~-~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-~~~~v--~ 307 (368)
|+.||.|++|+..... + ..+.. |...|++++|+|+|.+|++++. +. |+|||+++++.+..+.... |...+ .
T Consensus 188 -g~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 264 (343)
T 3lrv_A 188 -YSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECD-QT-VVCFDLRKDVGTLAYPTYTIPEFKTGTV 264 (343)
T ss_dssp -ECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEES-SB-EEEEETTSSTTCBSSCCCBC-----CCE
T ss_pred -EcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeC-Ce-EEEEEcCCCCcceeecccccccccccce
Confidence 7799999998877644 3 46777 9999999999999999999995 48 9999999988765554310 12233 4
Q ss_pred EEEEecCCCEEEEEeC-CCeEEEEEccCCCC
Q 017642 308 SLAFSSNAQWLAVSSD-KGTVHVFNLKVNSG 337 (368)
Q Consensus 308 ~l~~sp~~~~l~s~s~-dg~i~iwd~~~~~~ 337 (368)
+++|+|+|++|++++. |+.|+||++++...
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEccccc
Confidence 6999999999999988 99999999976644
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=2.2e-28 Score=240.75 Aligned_cols=243 Identities=12% Similarity=0.169 Sum_probs=205.3
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+|+|++|++|+ |+.|+|||+.+++.. ..+. .|...+.++.|++++..+++++.| |.
T Consensus 49 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-----g~ 120 (814)
T 3mkq_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV--VDFE-AHPDYIRSIAVHPTKPYVLSGSDD-----LT 120 (814)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE--EEEE-CCSSCEEEEEECSSSSEEEEEETT-----SE
T ss_pred EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE--EEEe-cCCCCEEEEEEeCCCCEEEEEcCC-----CE
Confidence 34457999999999999999999999 778999999877655 4453 788889999999999888888887 99
Q ss_pred EEEEeCCCC-cEEEEEe-cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEeccC-CCeeEEEEec--CCCe
Q 017642 158 VMIWDDHQS-RCIGELS-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIA-NPKGLCAVSQ--GVGS 228 (368)
Q Consensus 158 i~vwd~~~~-~~~~~~~-~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~ 228 (368)
|++||+.++ .....+. |...|.+++|+| ++..++ .||.|++||+++++....+..+. ..+..++|+| ++..
T Consensus 121 i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 200 (814)
T 3mkq_A 121 VKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY 200 (814)
T ss_dssp EEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCE
T ss_pred EEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCE
Confidence 999999887 6666676 899999999999 777776 58999999998888777776554 7899999999 6653
Q ss_pred EEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEE
Q 017642 229 LVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIY 307 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (368)
+++ |+.||.|++|+... ..+..+..|...|.+++|+|++++|++++.||. |++||+.+++.+..+.. +...+.
T Consensus 201 --l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--~~~~v~ 274 (814)
T 3mkq_A 201 --MIT-ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNV--GLERSW 274 (814)
T ss_dssp --EEE-ECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECC--SSSSEE
T ss_pred --EEE-EeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeec--CCCcEE
Confidence 444 67899999988654 566778889999999999999999999999999 99999999999988887 677999
Q ss_pred EEEEecCCC--EEEEEeCCCeEEEEEccCCC
Q 017642 308 SLAFSSNAQ--WLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 308 ~l~~sp~~~--~l~s~s~dg~i~iwd~~~~~ 336 (368)
+++|+|++. +++++ .++.+.+|++....
T Consensus 275 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 275 CIATHPTGRKNYIASG-FDNGFTVLSLGNDE 304 (814)
T ss_dssp EEEECTTCGGGEEEEE-ETTEEEEEECSCCS
T ss_pred EEEEccCCCceEEEEE-eCCCEEEEEcCCCC
Confidence 999999987 45554 56679999987654
No 96
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6.5e-29 Score=224.11 Aligned_cols=239 Identities=13% Similarity=0.025 Sum_probs=166.0
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEE---EcccCCceeEEEEEEeC--------CeEEEEecCC
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRR---DFERGGGIGVVEMLFRC--------NILALVGGGP 149 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~s~~~ 149 (368)
..|...+....+++++.+|++++ |+.|+|||++..+..... .+. +|...|.++.|+| ++..+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~~las~s~ 164 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQVIASVGD 164 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEEEEEEEET
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccC-CCCCceEEEEEccccccccCCCCCEEEEEEC
Confidence 34555556666677888999999 888999999877654322 243 7899999999987 7889999999
Q ss_pred CCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEE--------------
Q 017642 150 DPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQI-------------- 210 (368)
Q Consensus 150 d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~-------------- 210 (368)
| ++|+|||+.++.++..+. |...|.+++|+|++. +++ .|+.|++||+++++.....
T Consensus 165 D-----~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 165 D-----CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp T-----SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred C-----CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 8 999999998887766655 999999999999875 455 5999999999887643322
Q ss_pred -----------eccCCCeeEEEEe-cCCCeEEEEeecCCCCeEEEEecCcc-eeeeeeccCcceEEE-------------
Q 017642 211 -----------ETIANPKGLCAVS-QGVGSLVLVCPGLQKGQVRVEHYASK-RTKFIMAHDSRIACF------------- 264 (368)
Q Consensus 211 -----------~~~~~~v~~~~~~-~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~~~~~i~~v------------- 264 (368)
.+|...+.++.|. ++++. ++ +++.|+.+++|+.... ....+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~--l~-s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSG--IL-AMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCE--EE-EECTTSEEEEEEC-------------------CCSCSEEEECSSC
T ss_pred ccccceeeeecccccccceeeeeecCCCCE--EE-EEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccC
Confidence 2455667788886 67774 33 3678999999986542 223333333333332
Q ss_pred -----EECC--CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 265 -----ALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 265 -----~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
.|++ ++.++++|+.||. |+|||+.+++.+..+.. |...|.+++|+|||++||+++++| +.+|++.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGL-IQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTE-EEEEETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred cceeEEEccCCCCEEEEEECCCCE-EEEEECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 2333 3447788899999 99999999998888776 678999999999999999998776 7777764
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=5.1e-28 Score=230.43 Aligned_cols=251 Identities=12% Similarity=0.125 Sum_probs=206.8
Q ss_pred cccccCCCCC-EEEEEEcC--CCCEEEEEe-CCeEEEEEecCC------CcceEEEcccCCceeEEEEEEeCCeEEEEec
Q 017642 78 ESTSSSPPPT-LLHISFNQ--DHGCFAAGT-DHGFRIYNCDPF------REIFRRDFERGGGIGVVEMLFRCNILALVGG 147 (368)
Q Consensus 78 ~~~~~~h~~~-v~~~~~s~--~g~~l~~~~-d~~i~iw~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 147 (368)
......|... |++++|+| ++++|++|+ |+.|+|||+.++ .......+. .+...+.++.|++++..++++
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ-VLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE-CCSSCEEEEEECTTSSEEEEE
T ss_pred ceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh-cccccEEEEEEeCCCCEEEEe
Confidence 3455689999 99999999 999999999 888999999755 334445554 678889999999998888777
Q ss_pred CCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEEeccCC---CeeE
Q 017642 148 GPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIETIAN---PKGL 219 (368)
Q Consensus 148 ~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~~~~~~---~v~~ 219 (368)
+.+.. ..+.|++|| .++.+..+. |...|.+++|+|++. .++ .|+.|++||+++++.+..+..|.. .+.+
T Consensus 135 ~~~~~-~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 135 GEGRD-NFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp ECCSS-CSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred ccCCC-CccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 65300 014777777 667777877 999999999999986 454 589999999999999999999988 9999
Q ss_pred EEEecC-CCeEEEEeecCCCCeEEEEecCc-ceeeee-e---ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCce
Q 017642 220 CAVSQG-VGSLVLVCPGLQKGQVRVEHYAS-KRTKFI-M---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL 293 (368)
Q Consensus 220 ~~~~~~-~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~-~---~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~ 293 (368)
++|+|+ ++. +++ ++.||.|++|+... +.+..+ . .|...|.+++|+ ++++|++++.||. |++||+.+++.
T Consensus 212 ~~~~~~~~~~--l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~-i~~wd~~~~~~ 286 (615)
T 1pgu_A 212 VEFSPDSGEF--VIT-VGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADAT-IRVWDVTTSKC 286 (615)
T ss_dssp EEECSTTCCE--EEE-EETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSE-EEEEETTTTEE
T ss_pred EEECCCCCCE--EEE-EeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCc-EEEEECCCCcE
Confidence 999999 774 333 56799999998654 555666 5 899999999999 9999999999999 99999999999
Q ss_pred eEeeEecc--CcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 294 LQEVRRGA--DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 294 ~~~~~~~~--~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+..+..+. +...+.++.|. ++.++++++.||.|++||+.+++..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~ 332 (615)
T 1pgu_A 287 VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVL 332 (615)
T ss_dssp EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEE
T ss_pred EEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEE
Confidence 88887631 23578888886 8999999999999999999875543
No 98
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=9.2e-28 Score=218.55 Aligned_cols=242 Identities=14% Similarity=0.155 Sum_probs=200.1
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCC
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~ 166 (368)
-++.|+||++ ++||+|.|+.|+|||..+++......+. .|...|.+++|++++..+++++.| +.|++||+.++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~-~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~ 179 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQME-QPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQ 179 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECC-STTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTT
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEec-CCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCC
Confidence 3567999975 5899999999999999988766554553 778889999999999999999988 99999999999
Q ss_pred cEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCC-CeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeE
Q 017642 167 RCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQV 241 (368)
Q Consensus 167 ~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i 241 (368)
+.+..+. |...+.++.+++ .+++ .|+.+++||... ...+..+.+|...+..+.++++++. +++ ++.|+.+
T Consensus 180 ~~~~~~~~h~~~v~~~s~~~--~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~--l~s-~~~D~~v 254 (420)
T 4gga_A 180 KRLRNMTSHSARVGSLSWNS--YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH--LAS-GGNDNLV 254 (420)
T ss_dssp EEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE--EEE-EETTSCE
T ss_pred cEEEEEeCCCCceEEEeeCC--CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCe--eee-eeccccc
Confidence 9999988 899998887754 4555 589999999976 4556778899999999999999985 343 6689999
Q ss_pred EEEecCcc-----eeeeeeccCcceEEEEECCCCC-EEEE--EeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 242 RVEHYASK-----RTKFIMAHDSRIACFALTQDGQ-LLAT--SSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 242 ~i~~~~~~-----~~~~~~~~~~~i~~v~~sp~g~-~l~s--~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
++|+.... .+.....|...|.+++|+|++. ++++ |+.|+. |+|||+.+++++..+.. ...+.++.|++
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~---~~~v~~~~~~~ 330 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDA---HSQVCSILWSP 330 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEET
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeecc---ccceeeeeecC
Confidence 99876542 3455678999999999999765 5554 457999 99999999999988875 45799999999
Q ss_pred CCCEEEEEe--CCCeEEEEEccCCCCCCCCCCC
Q 017642 314 NAQWLAVSS--DKGTVHVFNLKVNSGSARSEPR 344 (368)
Q Consensus 314 ~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~ 344 (368)
+++.+++++ .|+.|+|||+.+++......++
T Consensus 331 ~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH 363 (420)
T 4gga_A 331 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGH 363 (420)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCC
T ss_pred CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC
Confidence 999988765 7899999999998876655544
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=3.3e-27 Score=216.51 Aligned_cols=237 Identities=21% Similarity=0.293 Sum_probs=198.1
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 79 STSSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 79 ~~~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.....|...|.+++|+ +.+|++|+ |+.|++||+.+++.. ..+. .|...+.++.++++. +++++.| +.
T Consensus 153 ~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~--~~~~-~h~~~v~~~~~~~~~--l~s~s~d-----g~ 220 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECI--HTLY-GHTSTVRCMHLHEKR--VVSGSRD-----AT 220 (445)
T ss_dssp EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE--EEEC-CCSSCEEEEEEETTE--EEEEETT-----SE
T ss_pred EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEE--EEEC-CCCCcEEEEEecCCE--EEEEeCC-----CE
Confidence 4456899999999997 56888888 888999999876554 4454 788889999998765 4555555 99
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
|++||+.+++.+..+. |...|.++++ ++.+++ .|+.|++||+++++.+..+..|...+.++.+ ++.. +++
T Consensus 221 i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~--l~~ 294 (445)
T 2ovr_B 221 LRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIH--VVS 294 (445)
T ss_dssp EEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSE--EEE
T ss_pred EEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCE--EEE
Confidence 9999999999999988 9999999999 455555 5999999999999999999999999998888 6654 343
Q ss_pred ecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec-cCcccEEEEEE
Q 017642 234 PGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLAF 311 (368)
Q Consensus 234 ~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~ 311 (368)
|+.||.|++|+.. ++.+..+.+|...+.++.+ ++++|++|+.||. |++||+++++.+..+... .|...|.+++|
T Consensus 295 -~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 295 -GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQF 370 (445)
T ss_dssp -EETTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEEEE
T ss_pred -EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEEEE
Confidence 6689999998865 4667778899999999887 5679999999999 999999999999888752 26678999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 312 SSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 312 sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
+ +++|++++.||.|++||+.+++...
T Consensus 371 ~--~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 371 N--KNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp C--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred C--CCEEEEEeCCCeEEEEECCCCceee
Confidence 5 6899999999999999999887654
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.8e-27 Score=211.02 Aligned_cols=238 Identities=11% Similarity=0.077 Sum_probs=193.1
Q ss_pred CCCEEEEEEcCCCCEE-EEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEE-EecCCCCCCCCCcEEEE
Q 017642 85 PPTLLHISFNQDHGCF-AAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l-~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~~~~~~i~vw 161 (368)
...+.+++|+|+|++| ++++ ++.|++||+.+++.. ..+. .+ ..+.++.|++++..+ +++..+ +.|++|
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--~~~~-~~-~~v~~~~~spdg~~l~~~~~~~-----~~v~v~ 101 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--ATVP-AG-SSPQGVAVSPDGKQVYVTNMAS-----STLSVI 101 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE--EEEE-CS-SSEEEEEECTTSSEEEEEETTT-----TEEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE--EEEE-CC-CCccceEECCCCCEEEEEECCC-----CEEEEE
Confidence 3468999999999987 5554 888999999876655 3343 22 278899999887654 555555 899999
Q ss_pred eCCCCcEEEEEecCCceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCC
Q 017642 162 DDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 162 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
|+.+++.+..+.+...+.+++|+++++.++ .++.|++||+++++.+..+..+ ..+..++|+++++.++++ ++.
T Consensus 102 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~--~~~ 178 (391)
T 1l0q_A 102 DTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVA--NFD 178 (391)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEE--ETT
T ss_pred ECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEE--eCC
Confidence 999999999888778899999999998663 4899999999999998888755 456889999999875443 567
Q ss_pred CCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe---CCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecC
Q 017642 238 KGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS---TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSN 314 (368)
Q Consensus 238 dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~---~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~ 314 (368)
++.|++|+...........+...+.+++|+|+|++|++++ .++. |++||+.+++.+..+.. + ..+.+++|+|+
T Consensus 179 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~--~-~~~~~~~~s~d 254 (391)
T 1l0q_A 179 SMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPV--G-PDPAGIAVTPD 254 (391)
T ss_dssp TTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEEC--C-SSEEEEEECTT
T ss_pred CCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEec--C-CCccEEEEccC
Confidence 8999999887765555555667899999999999988888 6888 99999999998888876 3 35889999999
Q ss_pred CCEE-EEEeCCCeEEEEEccCCCCC
Q 017642 315 AQWL-AVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 315 ~~~l-~s~s~dg~i~iwd~~~~~~~ 338 (368)
|++| ++++.|+.|++||+.+++..
T Consensus 255 g~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 255 GKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEE
Confidence 9977 56688999999999886543
No 101
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=4.9e-29 Score=223.92 Aligned_cols=206 Identities=14% Similarity=0.254 Sum_probs=177.1
Q ss_pred EEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcE
Q 017642 121 RRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKI 196 (368)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i 196 (368)
...+. +|...|.++.|++++..+++++.| ++|++||+.+++....+. |...|.+++|+|++.+++ .|+.|
T Consensus 59 ~~~l~-gH~~~V~~~~~sp~~~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 59 CRTLQ-GHSGKVYSLDWTPEKNWIVSASQD-----GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEEEC-CCSSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred eeccc-ccccEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 35565 899999999999999999999998 999999999999999998 999999999999999998 69999
Q ss_pred EEEEcCCCe-------EEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc-eeeee-----eccCcceEE
Q 017642 197 FVYNFADLK-------LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFI-----MAHDSRIAC 263 (368)
Q Consensus 197 ~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~-----~~~~~~i~~ 263 (368)
++||+.+.. ....+.+|.+.+.++.|.|++...+ + +|+.|+.|++|+.... .+..+ .+|...|.+
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l-~-s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRL-I-TGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCE-E-EECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEE-E-EECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 999996532 3455678999999999999876533 3 3778999999987653 34334 578999999
Q ss_pred EEECC-CCCEEEEEeCCCcEEEEEECC-CCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 264 FALTQ-DGQLLATSSTKGTLVRIFNTL-DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 264 v~~sp-~g~~l~s~~~dg~~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
++|++ ++.+|++|+.|+. |++||++ .++.+..+.+ |.+.|.+++|+|++++|++++.||+|++||+++++.
T Consensus 211 ~~~~~~~~~~l~sgs~D~~-v~~wd~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTT-VRLWDLRITSRAVRTYHG--HEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp EEECSSSCCEEEEEETTSC-EEEEETTTTCCCCEEECC--CSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEE
T ss_pred EEeecCCCCEEEEEECCCe-EEEEECCCCCcceEEECC--cCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcE
Confidence 99987 8889999999999 9999998 4567777777 888999999999999999999999999999988754
No 102
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=3.1e-28 Score=223.16 Aligned_cols=235 Identities=12% Similarity=0.144 Sum_probs=184.2
Q ss_pred CCEEEEEEcCCC--CEEEEEe-CCeEEEEEecCCCcce-------------------------------------EEEcc
Q 017642 86 PTLLHISFNQDH--GCFAAGT-DHGFRIYNCDPFREIF-------------------------------------RRDFE 125 (368)
Q Consensus 86 ~~v~~~~~s~~g--~~l~~~~-d~~i~iw~~~~~~~~~-------------------------------------~~~~~ 125 (368)
..|++++|+|++ .+|++++ |+.|++|++....... ...+.
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 889999999998 7888888 8889999987533210 11222
Q ss_pred cCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC-CcEEEEE-------e-cCCceeEEEEeeCc-cEEE---e
Q 017642 126 RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGEL-------S-FRSEVRSVKLRRDR-IIVV---L 192 (368)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~-~~~~~~~-------~-~~~~v~~~~~~~~~-~~l~---~ 192 (368)
..|...+.++.|++++..++++ .| +.|++||+.+ ++.+..+ . |...|.+++|+|++ .+++ .
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~ 247 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS 247 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC
Confidence 3688889999999999988888 56 9999999984 4455433 3 88899999999998 7776 5
Q ss_pred CCcEEEEEcCCCeE----EEEEeccCC------------CeeEEEEecCCCeEEEEeecCCCCeEEEEecC--cceeeee
Q 017642 193 EQKIFVYNFADLKL----LHQIETIAN------------PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKRTKFI 254 (368)
Q Consensus 193 d~~i~vwd~~~~~~----~~~~~~~~~------------~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~--~~~~~~~ 254 (368)
|+.|++||+++++. +..+..+.. .+.+++|+|+++. +++ ++. +.|++|+.. .+.+..+
T Consensus 248 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~--l~~-~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 248 KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY--MMT-RDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE--EEE-EES-SEEEEEETTCCSSCSCCE
T ss_pred CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE--EEE-eeC-CeEEEEeCCCCcccccee
Confidence 99999999999886 678877775 8999999999985 443 555 999999876 4566677
Q ss_pred eccCcc---------------eEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec-------------------
Q 017642 255 MAHDSR---------------IACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG------------------- 300 (368)
Q Consensus 255 ~~~~~~---------------i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~------------------- 300 (368)
..|... +..++|+|++++|++|+.||. |+|||+.+++.+ .+..+
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~-v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 401 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNF-FRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASG 401 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTE-EEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSS
T ss_pred eccccccccccccccccccccceEEEECCCCCEEEEeccCCE-EEEEEcCCCcce-eeeecccccccccccCCccccccC
Confidence 777542 334999999999999999999 999999988776 32221
Q ss_pred ------------cCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 301 ------------ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 301 ------------~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
.....|..++|+|++.+|++++.++ +++|.-+
T Consensus 402 ~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 402 KRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred CcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 1235688999999999999998776 8888743
No 103
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.9e-29 Score=227.22 Aligned_cols=228 Identities=8% Similarity=-0.006 Sum_probs=180.2
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCC-----------------------------cceEEEcccCCceeE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFR-----------------------------EIFRRDFERGGGIGV 132 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~-----------------------------~~~~~~~~~~~~~~~ 132 (368)
.-...|.+++|+|||+++|+++ |++|+ |....+ ......+ .+...|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~--~~~~~V 88 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS--QPVCYP 88 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT--SCSCCE
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeec--CCCCcE
Confidence 4457899999999999999988 77785 432222 1111111 346779
Q ss_pred EEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCC-----ceeEEEEeeCccEEE---eCCcEEEEEcCCC
Q 017642 133 VEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS-----EVRSVKLRRDRIIVV---LEQKIFVYNFADL 204 (368)
Q Consensus 133 ~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~---~d~~i~vwd~~~~ 204 (368)
.+++|+|++..+++++.| |.|++||... ++..+.|.. .|.+++|+|||++++ .||+|++||+.++
T Consensus 89 ~~vawSPdG~~LAs~s~d-----g~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNN-----GNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EEEEECSSSSCEEEEETT-----SCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred EEEEECCCCCEEEEEeCC-----CcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 999999999999999988 9999999544 555555443 599999999999999 5999999999887
Q ss_pred e-------EEEEE----eccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceee----ee-eccCcceEEEEECC
Q 017642 205 K-------LLHQI----ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK----FI-MAHDSRIACFALTQ 268 (368)
Q Consensus 205 ~-------~~~~~----~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~----~~-~~~~~~i~~v~~sp 268 (368)
+ .+.++ .+|...|.+++|+|+| + ++ ++.|+.|++|+..++... .+ .+|...|.+++|+
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---L-aa-ss~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---L-VA-ALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---E-EE-EETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc---E-EE-EeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 5 35676 5567899999999998 3 33 456999999998876643 35 4788899999999
Q ss_pred CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEE--ecCCCEEEEEeCCCeEEEEEcc
Q 017642 269 DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF--SSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 269 ~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~--sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
|++||+++ ++. |++||+.+++......+ |...|.+++| +||+..|+++++||+ ++|.++
T Consensus 236 -g~~LASa~-~~t-IkLWd~~~~~~~~~~~g--h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 236 -DYKVVLTC-PGY-VHKIDLKNYSISSLKTG--SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -TTEEEEEC-SSE-EEEEETTTTEEEEEECS--CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred -CCEEEEEe-CCe-EEEEECCCCeEEEEEcC--CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 68899887 588 99999988777433324 7889999999 999999999999999 999986
No 104
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=4.3e-29 Score=218.60 Aligned_cols=200 Identities=14% Similarity=0.178 Sum_probs=166.0
Q ss_pred CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCc--EEEEEe-cCCceeEEEEee--CccEEE---eCCcEEE
Q 017642 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR--CIGELS-FRSEVRSVKLRR--DRIIVV---LEQKIFV 198 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~--~~~~~~-~~~~v~~~~~~~--~~~~l~---~d~~i~v 198 (368)
+|...|.++.|++++..+++++.| ++|++||+.+++ .+..+. |.+.|.+++|++ ++.+++ .|++|++
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cccCeEEEeeEcCCCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 788899999999999999999988 999999998875 456676 999999999986 366666 5999999
Q ss_pred EEcCCC--eEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcce----eeeeeccCcceEEEEECCC---
Q 017642 199 YNFADL--KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR----TKFIMAHDSRIACFALTQD--- 269 (368)
Q Consensus 199 wd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~----~~~~~~~~~~i~~v~~sp~--- 269 (368)
||++++ +....+.+|...|.+++|+|++...++++ |+.|+.|++|+..... ...+.+|...|.+++|+|+
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~las-gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC-GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEE-ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEE-EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 999887 45667788999999999999843334554 7889999999876531 3456789999999999997
Q ss_pred --------------CCEEEEEeCCCcEEEEEECCCC---ceeEeeEeccCcccEEEEEEecCC----CEEEEEeCCCeEE
Q 017642 270 --------------GQLLATSSTKGTLVRIFNTLDG---TLLQEVRRGADRAEIYSLAFSSNA----QWLAVSSDKGTVH 328 (368)
Q Consensus 270 --------------g~~l~s~~~dg~~i~iwd~~~~---~~~~~~~~~~~~~~v~~l~~sp~~----~~l~s~s~dg~i~ 328 (368)
+++|++|+.|+. |+|||++.. +.+..+.+ |...|.+++|+|++ ++|++++.|++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEA--HSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp ------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBC--CSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred ccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeeccc--CCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 468999999999 999999755 35666766 78899999999987 7999999999999
Q ss_pred EEEccCC
Q 017642 329 VFNLKVN 335 (368)
Q Consensus 329 iwd~~~~ 335 (368)
||++++.
T Consensus 242 iw~~~~~ 248 (316)
T 3bg1_A 242 IWTCDDA 248 (316)
T ss_dssp EEECSST
T ss_pred EEEccCc
Confidence 9999874
No 105
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=8.2e-27 Score=212.88 Aligned_cols=239 Identities=13% Similarity=0.118 Sum_probs=196.0
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEE-EecCCCCCCCCCcE
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKV 158 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~~~~~~i 158 (368)
...|...|.+++|+++++++++++ |+.|++||+++.+.. ..+. .+...+.++.|++++..+ +++..+ +.|
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~-----~~i 236 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK--ATVD-LTGKWSKILLYDPIRDLVYCSNWIS-----EDI 236 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE--EEEE-CSSSSEEEEEEETTTTEEEEEETTT-----TEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE--EEEc-CCCCCeeEEEEcCCCCEEEEEecCC-----CcE
Confidence 347888999999999999999998 788999999876654 3343 567778899999877544 555555 999
Q ss_pred EEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--e---------CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCC
Q 017642 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--L---------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG 227 (368)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~---------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 227 (368)
++||+.+++.+..+.....+.+++|+|++..++ . |+.|++||+++++.+..+. +...+..++|+++++
T Consensus 237 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 237 SVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTEN 315 (433)
T ss_dssp EEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTT
T ss_pred EEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCC
Confidence 999999999988888777899999999997776 2 5799999999998877663 455788899999998
Q ss_pred eEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeC---------------CCcEEEEEECCCCc
Q 017642 228 SLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST---------------KGTLVRIFNTLDGT 292 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~---------------dg~~i~iwd~~~~~ 292 (368)
.++++ ++.++.|++|+...........+...+.+++|+|+|++|++++. ||. |++||+.+++
T Consensus 316 ~l~~~--~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~ 392 (433)
T 3bws_A 316 KIYVS--DMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDT 392 (433)
T ss_dssp EEEEE--ETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTE
T ss_pred EEEEE--ecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCc
Confidence 75443 56799999998876544444457788999999999998888876 468 9999999999
Q ss_pred eeEeeEeccCcccEEEEEEecCCCEEEEEeC-CCeEEEEEccC
Q 017642 293 LLQEVRRGADRAEIYSLAFSSNAQWLAVSSD-KGTVHVFNLKV 334 (368)
Q Consensus 293 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~-dg~i~iwd~~~ 334 (368)
.+..+.. ...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 393 ~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 393 VKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9888875 347899999999999988774 99999999863
No 106
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.1e-27 Score=216.99 Aligned_cols=240 Identities=9% Similarity=0.041 Sum_probs=188.6
Q ss_pred cCCCCCEEEEEEcCCCCEE-EEEe-CCeEEEEEec--CCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 82 SSPPPTLLHISFNQDHGCF-AAGT-DHGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l-~~~~-d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
..|.+.|++++|+|+|++| ++|+ |+.|+||++. .++....... +.+...+.++.|++++..+++++.+ +.
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~-----g~ 172 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-FCFSKRPNAISIAEDDTTVIIADKF-----GD 172 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-EECSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec-ccCCCCceEEEEcCCCCEEEEEeCC-----Cc
Confidence 4678899999999999996 7887 8889999998 5544422221 2466789999999999888888877 99
Q ss_pred EEEEeCCCCcEEE----EEe-cCCceeEEEEeeC---ccEEE---eCCcEEEEEcCCCeEEEE-EeccCCCeeEEEEecC
Q 017642 158 VMIWDDHQSRCIG----ELS-FRSEVRSVKLRRD---RIIVV---LEQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQG 225 (368)
Q Consensus 158 i~vwd~~~~~~~~----~~~-~~~~v~~~~~~~~---~~~l~---~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~ 225 (368)
|++|++.+++... .+. |...|.+++|+|+ +.+++ .|+.|++||+++++.+.. +.+|...+.+++|+ +
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d 251 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-K 251 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-S
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-C
Confidence 9999998876543 555 8899999999999 88887 589999999999988877 55789999999999 8
Q ss_pred CCeEEEEeecCCCCeEEEEecCc-ceeeeeec-------------------------cCcceEEEEECCCCCEEEEEe-C
Q 017642 226 VGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMA-------------------------HDSRIACFALTQDGQLLATSS-T 278 (368)
Q Consensus 226 ~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~-------------------------~~~~i~~v~~sp~g~~l~s~~-~ 278 (368)
++. +++ |+.|+.|++|+... +.+..+.. ....|.+++|+|++++|++++ .
T Consensus 252 ~~~--l~s-~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 252 DYL--LLS-AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp TTE--EEE-EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred CCE--EEE-EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 874 343 66899999998765 44444432 235689999999999999998 8
Q ss_pred CCcEEEEEEC--CCC---ceeEeeEeccCcccEEEEEEecCCCEEEEEeC------CCeEEEEEccCC
Q 017642 279 KGTLVRIFNT--LDG---TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD------KGTVHVFNLKVN 335 (368)
Q Consensus 279 dg~~i~iwd~--~~~---~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~------dg~i~iwd~~~~ 335 (368)
++. |+|||+ .++ +.+..+.. + +.|.+++|+|++.++++++. ++.|.+|.+...
T Consensus 329 d~~-i~iw~~~~~~~~~l~~~~~~~~--~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 329 TKC-IIILEMSEKQKGDLALKQIITF--P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp CSE-EEEEEECSSSTTCEEEEEEEEC--S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCe-EEEEEeccCCCCceeeccEecc--C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 888 999999 555 56666665 4 78999999996544444343 456899988654
No 107
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=2.5e-28 Score=223.34 Aligned_cols=202 Identities=15% Similarity=0.118 Sum_probs=164.5
Q ss_pred CCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEE--e-cCCceeEEEEee-CccEEE---eCCcEEE
Q 017642 127 GGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL--S-FRSEVRSVKLRR-DRIIVV---LEQKIFV 198 (368)
Q Consensus 127 ~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~--~-~~~~v~~~~~~~-~~~~l~---~d~~i~v 198 (368)
.+...|.+++|+| +...+++|+.| |.|+|||+.+++....+ . |.+.|.+++|+| ++.+++ .|++|++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~d-----g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKG-----GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETT-----SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4666799999998 45577888887 99999999877644433 3 899999999998 577776 5999999
Q ss_pred EEcCCCeEEEEEec--cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCC-EEEE
Q 017642 199 YNFADLKLLHQIET--IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQ-LLAT 275 (368)
Q Consensus 199 wd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~l~s 275 (368)
||++++........ +...+.+++|++++.. +++ |+.||.|++|+.+++.+..+.+|...|++++|+|++. +|++
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~-g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRM--VVT-GDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTE--EEE-ECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCE--EEE-EeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEE
Confidence 99987654433332 2335678999999984 443 7789999999999988889999999999999999986 7889
Q ss_pred EeCCCcEEEEEECCCCceeEeeE-eccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 276 SSTKGTLVRIFNTLDGTLLQEVR-RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 276 ~~~dg~~i~iwd~~~~~~~~~~~-~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
|+.|+. |+|||+++.+....+. ...|...|.+++|+|+|++|++++.||.|+|||+.+++.
T Consensus 269 ~s~d~~-v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 269 ASVDQT-VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp EETTSB-CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred ecCcce-eeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 999999 9999998876544332 122788999999999999999999999999999988654
No 108
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=5e-27 Score=210.96 Aligned_cols=205 Identities=12% Similarity=0.171 Sum_probs=175.6
Q ss_pred EEcccCCceeEEEEEEeCCe-EEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe---cCCceeEEEEee-CccEEE---eC
Q 017642 122 RDFERGGGIGVVEMLFRCNI-LALVGGGPDPQYPLNKVMIWDDHQSRCIGELS---FRSEVRSVKLRR-DRIIVV---LE 193 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~-~~~~l~---~d 193 (368)
..+. .|...+.++.|++++ ..+++++.| +.|++||+.+++....+. |...|.+++|+| ++.+++ .|
T Consensus 67 ~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d 140 (383)
T 3ei3_B 67 RTAS-PFDRRVTSLEWHPTHPTTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR 140 (383)
T ss_dssp EEEC-CCSSCEEEEEECSSCTTEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT
T ss_pred Eecc-CCCCCEEEEEECCCCCCEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC
Confidence 3443 788899999999998 788888877 999999999888877765 899999999999 667776 58
Q ss_pred CcEEEEEcCCCeEEEEEecc---CCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCC
Q 017642 194 QKIFVYNFADLKLLHQIETI---ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDG 270 (368)
Q Consensus 194 ~~i~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g 270 (368)
+.|++||+++ +.+..+..+ ...+.+++|+++++. +++ |+.|+.|++|+.+++.+..+..|...|.+++|+|++
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~ 216 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQM--LAT-GDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRC 216 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTE--EEE-EETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSC
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCE--EEE-ECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCC
Confidence 9999999985 455555443 377999999999985 343 678999999999888899999999999999999999
Q ss_pred C-EEEEEeCCCcEEEEEECCC----CceeEeeEeccCcccEEEEEEec-CCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 271 Q-LLATSSTKGTLVRIFNTLD----GTLLQEVRRGADRAEIYSLAFSS-NAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 271 ~-~l~s~~~dg~~i~iwd~~~----~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+ +|++++.|+. |++||+++ +..+..+ . |...|.+++|+| ++++|++++.|+.|++||+++++....
T Consensus 217 ~~~l~s~~~d~~-i~iwd~~~~~~~~~~~~~~-~--~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 217 DWLMATSSVDAT-VKLWDLRNIKDKNSYIAEM-P--HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp TTEEEEEETTSE-EEEEEGGGCCSTTCEEEEE-E--CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred CCEEEEEeCCCE-EEEEeCCCCCcccceEEEe-c--CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 9 9999999999 99999998 5666665 3 788999999999 999999999999999999998776443
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-26 Score=206.85 Aligned_cols=204 Identities=11% Similarity=0.179 Sum_probs=178.0
Q ss_pred EEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEE
Q 017642 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIF 197 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~ 197 (368)
..+. +|...+.+++|++++..+++++.| +.|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|+
T Consensus 26 ~~l~-~h~~~v~~~~~s~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 26 IKLT-GHERPLTQVKYNKEGDLLFSCSKD-----SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEE-CCSSCEEEEEECTTSCEEEEEESS-----SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE
T ss_pred EEEE-EeeceEEEEEEcCCCCEEEEEeCC-----CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 4454 889999999999999999998887 999999999999999998 999999999999998887 589999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCC-----CeEEEEecCcc------------eeeeeeccCc-
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-----GQVRVEHYASK------------RTKFIMAHDS- 259 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~d-----g~i~i~~~~~~------------~~~~~~~~~~- 259 (368)
+||+++++.+..+. +...+.+++|+++++.++. ++.+ +.|++|+.... ....+..|..
T Consensus 100 iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~---~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 100 LWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLA---ILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEE---EECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EEECCCCcEEEEee-cCCCeEEEEEccCCCEEEE---ecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 99999999988887 7889999999999986443 3355 99999876542 3344555666
Q ss_pred -ceEEEEECCCCCEEEEEeCCCcEEEEEECCC-CceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 260 -RIACFALTQDGQLLATSSTKGTLVRIFNTLD-GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 260 -~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
.+.+++|+|++++|++++.||. |++||+.+ ++.+..+.. |...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGK-ISKYDVSNNYEYVDSIDL--HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQV 252 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSE-EEEEETTTTTEEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cceeEEEEcCCCCEEEEEcCCCE-EEEEECCCCcEeEEEEec--CCCceeEEEECCCCCEEEEecCCceEEEEECCCCce
Confidence 8999999999999999999999 99999998 777878877 778999999999999999999999999999988765
Q ss_pred C
Q 017642 338 S 338 (368)
Q Consensus 338 ~ 338 (368)
.
T Consensus 253 ~ 253 (369)
T 3zwl_B 253 L 253 (369)
T ss_dssp E
T ss_pred e
Confidence 4
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=3.9e-27 Score=210.28 Aligned_cols=194 Identities=11% Similarity=0.078 Sum_probs=157.6
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe---CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
.+...+.+++|+|||++|++++ |+.|+|||+.+.+.. ..+ .+...|.+++|++++..+++++. +.++
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~--~~~--~~~~~V~~v~fspdg~~l~s~s~------~~~~ 200 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK--FEI--ETRGEVKDLHFSTDGKVVAYITG------SSLE 200 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE--EEE--ECSSCCCEEEECTTSSEEEEECS------SCEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE--EEe--CCCCceEEEEEccCCceEEeccc------eeEE
Confidence 4556789999999999987554 677999999876665 344 34556889999999999998886 5788
Q ss_pred EEeCCCCcEEEEEe---cCCceeEEEEeeCccEEE---eCC----cEEEEEcCCCeE----EEEEeccCCCeeEEEEecC
Q 017642 160 IWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQ----KIFVYNFADLKL----LHQIETIANPKGLCAVSQG 225 (368)
Q Consensus 160 vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~---~d~----~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~ 225 (368)
+|+..+++.+.... |...|.+++|+|++.+++ .|+ .+++||+..... ...+..|...|.+++|+|+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spd 280 (365)
T 4h5i_A 201 VISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMK 280 (365)
T ss_dssp EEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTT
T ss_pred EEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCC
Confidence 88878887665432 778899999999999887 344 688899876543 3456778889999999999
Q ss_pred CCeEEEEeecCCCCeEEEEecCc-ceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC
Q 017642 226 VGSLVLVCPGLQKGQVRVEHYAS-KRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 226 ~~~~~l~~~g~~dg~i~i~~~~~-~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
|+. ||+ |+.|+.|+||+... +.+.. +.+|...|++|+|+|||++||+|+.|++ |+|||+..
T Consensus 281 g~~--las-gs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~t-vrvw~ip~ 343 (365)
T 4h5i_A 281 GEL--AVL-ASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANT-IHIIKLPL 343 (365)
T ss_dssp SCE--EEE-EETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSE-EEEEECCT
T ss_pred CCc--eEE-EcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCe-EEEEEcCC
Confidence 984 454 77899999998765 55665 4789999999999999999999999999 99999964
No 111
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1e-26 Score=205.00 Aligned_cols=219 Identities=10% Similarity=0.139 Sum_probs=180.7
Q ss_pred EEEEEecCCCcceEEEcccCCceeEEEEEEeCC-eEEEEecCCCCCCCCCcEEEEeCCCCc-----EEEEEe-cCCceeE
Q 017642 108 FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSR-----CIGELS-FRSEVRS 180 (368)
Q Consensus 108 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~d~~~~~~~i~vwd~~~~~-----~~~~~~-~~~~v~~ 180 (368)
+.++...+.+..+..+|. +|...|.+++|+|+ +.++++++.| ++|+|||+.+++ +...+. |...|.+
T Consensus 18 ~~~~~~~~~~~~l~~tL~-GH~~~V~~v~~sp~~~~~l~S~s~D-----~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~ 91 (340)
T 4aow_A 18 LYFQSMMTEQMTLRGTLK-GHNGWVTQIATTPQFPDMILSASRD-----KTIIMWKLTRDETNYGIPQRALRGHSHFVSD 91 (340)
T ss_dssp --------CEEEEEEEEC-CCSSCEEEEEECTTCTTEEEEEETT-----SCEEEEEECCSSSCSEEEEEEECCCSSCEEE
T ss_pred EEEEEccCCceEEEEEEC-CccCCEEEEEEeCCCCCEEEEEcCC-----CeEEEEECCCCCcccceeeEEEeCCCCCEEE
Confidence 555555555556666786 89999999999987 5788888888 999999987653 455666 8999999
Q ss_pred EEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCccee--eeee
Q 017642 181 VKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT--KFIM 255 (368)
Q Consensus 181 ~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~--~~~~ 255 (368)
++|+|++.+++ .|+.|++|+............+...+..+.++++++. +++ |+.|+.+++|+...... ....
T Consensus 92 ~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~s-~s~d~~~~~~d~~~~~~~~~~~~ 168 (340)
T 4aow_A 92 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ--IVS-GSRDKTIKLWNTLGVCKYTVQDE 168 (340)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSC--EEE-EETTSCEEEECTTSCEEEEECSS
T ss_pred EEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCcc--cee-ecCCCeEEEEEeCCCceEEEEec
Confidence 99999999888 5999999999999888888888888888999998885 333 67899999998766443 3456
Q ss_pred ccCcceEEEEECCCC--CEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 256 AHDSRIACFALTQDG--QLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 256 ~~~~~i~~v~~sp~g--~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
+|...+..++|++++ .++++++.|+. |++||+++++.+..+.. |.+.|.+++|+|++++|++++.||.|++||++
T Consensus 169 ~~~~~v~~~~~~~~~~~~~~~s~~~d~~-i~i~d~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 169 SHSEWVSCVRFSPNSSNPIIVSCGWDKL-VKVWNLANCKLKTNHIG--HTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred cccCcccceEEccCCCCcEEEEEcCCCE-EEEEECCCCceeeEecC--CCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence 789999999999875 47899999999 99999999999988887 78899999999999999999999999999998
Q ss_pred CCCCC
Q 017642 334 VNSGS 338 (368)
Q Consensus 334 ~~~~~ 338 (368)
+.+..
T Consensus 246 ~~~~~ 250 (340)
T 4aow_A 246 EGKHL 250 (340)
T ss_dssp TTEEE
T ss_pred cCcee
Confidence 87654
No 112
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.8e-27 Score=211.65 Aligned_cols=199 Identities=13% Similarity=0.167 Sum_probs=171.0
Q ss_pred CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC--CCcEEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEE
Q 017642 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFV 198 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~v 198 (368)
+|...|.+++|++++..+++++.| +.|++||+. +++.+..+. |...|.+++|+++ +.+++ .|+.|++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 83 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred CCcccEEEEEEcCCCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEE
Confidence 788999999999999999998887 999999998 556677777 9999999999976 77777 5899999
Q ss_pred EEcCCCe--EEEEEeccCCCeeEEEEecC--CCeEEEEeecCCCCeEEEEecCcc---eeeeeeccCcceEEEEECC---
Q 017642 199 YNFADLK--LLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQ--- 268 (368)
Q Consensus 199 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~v~~sp--- 268 (368)
||+++++ .+..+..|...+.+++|+++ +.. +++ ++.|+.|++|+.... ....+..|...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL--LLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE--EEE-EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCE--EEE-ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 9999887 67777889999999999999 664 343 568999999987764 3445678999999999999
Q ss_pred ----------CCCEEEEEeCCCcEEEEEECCCCc----eeEeeEeccCcccEEEEEEecC---CCEEEEEeCCCeEEEEE
Q 017642 269 ----------DGQLLATSSTKGTLVRIFNTLDGT----LLQEVRRGADRAEIYSLAFSSN---AQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 269 ----------~g~~l~s~~~dg~~i~iwd~~~~~----~~~~~~~~~~~~~v~~l~~sp~---~~~l~s~s~dg~i~iwd 331 (368)
++.+|++++.||. |++||+++++ .+..+.. |...|.+++|+|+ +++|++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999999 9999998765 3344554 7889999999999 89999999999999999
Q ss_pred ccCCC
Q 017642 332 LKVNS 336 (368)
Q Consensus 332 ~~~~~ 336 (368)
+.+++
T Consensus 238 ~~~~~ 242 (379)
T 3jrp_A 238 QDNEQ 242 (379)
T ss_dssp ESSTT
T ss_pred CCCCC
Confidence 98864
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3.9e-26 Score=208.44 Aligned_cols=244 Identities=10% Similarity=0.043 Sum_probs=196.3
Q ss_pred CCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEE---EcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRR---DFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
...+.+++|+|++.++++++ ++.|++||+.+++..... .+. .|...+.++.+++++..+++++.| +.|++
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~ 195 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYK-KKLGFVETISIPEHNELWVSQMQA-----NAVHV 195 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHH-TTCCEEEEEEEGGGTEEEEEEGGG-----TEEEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCccccc-ccCCceeEEEEcCCCEEEEEECCC-----CEEEE
Confidence 34567899999777777777 666999999876654221 222 667788999999999888988887 99999
Q ss_pred EeCCCCcEEEEEe-cCCceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeec
Q 017642 161 WDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 161 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
||+.+++.+..+. +...+.+++|+|++..++ .|+.|++||+++++.+..+..+ ..+..++|+|+++.++++..+
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEE
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECC
Confidence 9999999998887 888999999999998774 3789999999999988887654 458889999999875544322
Q ss_pred C-----CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCE-EEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEE
Q 017642 236 L-----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQL-LATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 236 ~-----~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~-l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (368)
. .|+.|++|+...........|...+.+++|+|++++ +++++.++. |++||+.+++.+..+. +...+.++
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~---~~~~~~~~ 350 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIP---VFDKPNTI 350 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSSEEEE
T ss_pred CCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEec---CCCCCCeE
Confidence 1 488999999876655555566778999999999974 566688998 9999999998887776 45679999
Q ss_pred EEecCCCEEEEEeC---------------CCeEEEEEccCCCCCC
Q 017642 310 AFSSNAQWLAVSSD---------------KGTVHVFNLKVNSGSA 339 (368)
Q Consensus 310 ~~sp~~~~l~s~s~---------------dg~i~iwd~~~~~~~~ 339 (368)
+|+|+|++|++++. ||.|++||+.+++...
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE
Confidence 99999999888876 5799999998876543
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.2e-26 Score=211.81 Aligned_cols=200 Identities=15% Similarity=0.169 Sum_probs=167.4
Q ss_pred CCceeEEEEEEeCC-eEEEEecCCCCCCCCCcEEEEeCCC----------CcEEEEEe-cCCceeEEEEeeCcc-EEE--
Q 017642 127 GGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQ----------SRCIGELS-FRSEVRSVKLRRDRI-IVV-- 191 (368)
Q Consensus 127 ~~~~~~~~~~~~~~-~~~~~s~~~d~~~~~~~i~vwd~~~----------~~~~~~~~-~~~~v~~~~~~~~~~-~l~-- 191 (368)
.|...+.++.|+++ ..++++++.+ |.|++||+.+ .+.+..+. |...|.+++|+|++. +++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 57778889999997 6788888877 9999999876 56667777 999999999999987 666
Q ss_pred -eCCcEEEEEcCCCeE-------EEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc----eeeeeeccCc
Q 017642 192 -LEQKIFVYNFADLKL-------LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK----RTKFIMAHDS 259 (368)
Q Consensus 192 -~d~~i~vwd~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~----~~~~~~~~~~ 259 (368)
.||.|++||+..+.. ...+..|...+.+++|+|++..++ ++ ++.||.|++|+.... .+..+..|..
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l-~s-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF-GS-VADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE-EE-EETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE-EE-EeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 589999999987322 456668889999999999665533 33 568999999987753 5566778999
Q ss_pred ceEEEEECCCCC-EEEEEeCCCcEEEEEECCC-CceeEeeEeccCcccEEEEEEecCCC-EEEEEeCCCeEEEEEccCCC
Q 017642 260 RIACFALTQDGQ-LLATSSTKGTLVRIFNTLD-GTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 260 ~i~~v~~sp~g~-~l~s~~~dg~~i~iwd~~~-~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~s~dg~i~iwd~~~~~ 336 (368)
.|++++|+|++. +|++|+.||. |+|||+++ .+.+..+.. |...|.+++|+|+++ +|++++.||.|+|||+....
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999999999997 7999999999 99999998 566777877 788999999999995 78999999999999998844
No 115
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.7e-27 Score=233.04 Aligned_cols=248 Identities=13% Similarity=0.111 Sum_probs=192.4
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcc----eEEEc----ccCCceeEEEEEEeCCeEEEEecCCCC
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREI----FRRDF----ERGGGIGVVEMLFRCNILALVGGGPDP 151 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~----~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~d~ 151 (368)
..+|...+.+++|+|+|++|++|+ |+.|++||+..+... +...+ ..+|...|.+++|++++..+++++.|
T Consensus 431 l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~D- 509 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIET- 509 (902)
T ss_dssp CCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETT-
T ss_pred ccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecC-
Confidence 345666677778889999999999 889999999876421 11111 01577889999999999999999998
Q ss_pred CCCCCcEEEEeCCCCc---------------------------------------------EEEEEe-cCCceeEEEEee
Q 017642 152 QYPLNKVMIWDDHQSR---------------------------------------------CIGELS-FRSEVRSVKLRR 185 (368)
Q Consensus 152 ~~~~~~i~vwd~~~~~---------------------------------------------~~~~~~-~~~~v~~~~~~~ 185 (368)
|+|+|||+.+++ ++..+. |.+.|++++|+|
T Consensus 510 ----gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp 585 (902)
T 2oaj_A 510 ----GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN 585 (902)
T ss_dssp ----SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB
T ss_pred ----cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC
Confidence 999999987662 356666 999999999999
Q ss_pred CccEEE---eCCcEEEEEcCCCeEEEE-----Ee-ccCCCeeEEEEe-----cCCC-eEEEEeecCCCCeEEEEec----
Q 017642 186 DRIIVV---LEQKIFVYNFADLKLLHQ-----IE-TIANPKGLCAVS-----QGVG-SLVLVCPGLQKGQVRVEHY---- 246 (368)
Q Consensus 186 ~~~~l~---~d~~i~vwd~~~~~~~~~-----~~-~~~~~v~~~~~~-----~~~~-~~~l~~~g~~dg~i~i~~~---- 246 (368)
|| +++ .|++|+|||++++..+.. +. +|...|++++|+ +||. ...|++ |+.|++|++|+.
T Consensus 586 dG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~s-gs~D~tv~~wd~~p~~ 663 (902)
T 2oaj_A 586 IG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVC-GTDMGEVITYKILPAS 663 (902)
T ss_dssp TS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEE-EETTSEEEEEEEEECG
T ss_pred Cc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEE-EecCCcEEEEEEecCC
Confidence 99 777 589999999988876542 22 678889999999 8862 234554 789999999986
Q ss_pred Ccceeeeeecc-----CcceEEEE-EC----------------------CCCCEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 247 ASKRTKFIMAH-----DSRIACFA-LT----------------------QDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 247 ~~~~~~~~~~~-----~~~i~~v~-~s----------------------p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
+++....+.+| .++|..++ |+ +++.+|+++ +.. ||||++.++++.+...
T Consensus 664 ~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~-ir~~~~~~~k~~~k~~ 740 (902)
T 2oaj_A 664 GGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDD-IRLITLGKSKSTHKGF 740 (902)
T ss_dssp GGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSE-EEEECTTCCCEEEEEC
T ss_pred CCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccc-eEEEeCccccceeeEc
Confidence 55666666666 46777776 65 455555544 556 9999999999987775
Q ss_pred eccCcccEEEE---E------EecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 299 RGADRAEIYSL---A------FSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 299 ~~~~~~~v~~l---~------~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
. |...+.++ . |++++..|++++.||+|++|++.+.+....
T Consensus 741 ~--~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~s~p~l~~~~~ 789 (902)
T 2oaj_A 741 K--YPLAATGLSYISTVEKNNDRKNLTVIITLEINGHLRVFTIPDFKEQMS 789 (902)
T ss_dssp S--SCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEEEEEETTTCCEEEE
T ss_pred c--cceeeeEEEEEEeccccccccCceEEEEEeCCCcEEEEECcchHHHhh
Confidence 4 45566666 5 788999999999999999999999887544
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=1.3e-25 Score=199.80 Aligned_cols=232 Identities=11% Similarity=0.119 Sum_probs=176.5
Q ss_pred CEEEEEEcCCCCEEEE-Ee-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 87 TLLHISFNQDHGCFAA-GT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~-~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
.+..+++.++++.++. ++ |+.|+|||+.+++... .+. +...+.++.++++..+++. + +.|++||+.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~--~~~--~~~~v~~v~~~~~~~~~~~---~-----~~i~i~d~~ 127 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVS--RIK--VDAPVKDLFLSREFIVVSY---G-----DVISVFKFG 127 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEE--EEE--CSSCEEEEEECSSEEEEEE---T-----TEEEEEESS
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEE--EEE--CCCceEEEEEcCCEEEEEE---c-----CEEEEEECC
Confidence 5778889998888754 44 7789999988776653 342 4457889999998877664 2 789999999
Q ss_pred CC-cEEEEEecCCceeEEEEeeCccEEE----eCCcEEEEEcCCCe----------------EEEEEeccCCCeeEEEEe
Q 017642 165 QS-RCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLK----------------LLHQIETIANPKGLCAVS 223 (368)
Q Consensus 165 ~~-~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~----------------~~~~~~~~~~~v~~~~~~ 223 (368)
++ +.+..+.. ....+++++ ..+++ .||.|++||+++++ ++..+.+|...|.+++|+
T Consensus 128 ~~~~~~~~~~~--~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 128 NPWKRITDDIR--FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp TTCCBSSCCEE--EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEEC
T ss_pred CCceeeEEecc--CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEEC
Confidence 88 66555554 444556666 33322 47899999998765 267888999999999999
Q ss_pred cCCCeEEEEeecCCCCe-EEEEecC-cceeeeee-c-cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeE--e-
Q 017642 224 QGVGSLVLVCPGLQKGQ-VRVEHYA-SKRTKFIM-A-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--E- 296 (368)
Q Consensus 224 ~~~~~~~l~~~g~~dg~-i~i~~~~-~~~~~~~~-~-~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~--~- 296 (368)
|+++. +++ |+.|++ |++|+.. ++.+..+. + |...|.+++|+|+|++|++++.|+. |+|||++.+.... .
T Consensus 205 ~~g~~--l~s-~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~-v~iw~~~~~~~~~~~~~ 280 (355)
T 3vu4_A 205 RKSDM--VAT-CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT-LHVFEIFNDQDNKRHAL 280 (355)
T ss_dssp TTSSE--EEE-EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE-EEEEESSCCSCCCSEET
T ss_pred CCCCE--EEE-EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE-EEEEEccCCCCcccccc
Confidence 99984 443 778998 9999876 46667777 5 9999999999999999999999999 9999997653211 1
Q ss_pred -------------------eEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 297 -------------------VRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 297 -------------------~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+... +......++|++|+++|++++.||.+++|++..++..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 281 KGWINMKYFQSEWSLCNFKLSVD-KHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp TTTEECCCCCCSSCSEEEECCCC-TTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred cceeeccccccccceeEEEeccC-CCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 1100 1123467899999999999999999999999876653
No 117
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=4.3e-26 Score=205.95 Aligned_cols=224 Identities=14% Similarity=0.196 Sum_probs=180.6
Q ss_pred CeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-----------
Q 017642 106 HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS----------- 173 (368)
Q Consensus 106 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~----------- 173 (368)
..+++|+++..+.. ..+. .|...+.++.|++ ++..+++++.| |.|++||+.+++....+.
T Consensus 23 ~~~~v~~~~~~~~~--~~~~-~h~~~v~~~~~s~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 94 (408)
T 4a11_B 23 STRRVLGLELNKDR--DVER-IHGGGINTLDIEPVEGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDH 94 (408)
T ss_dssp HHHHHHTEEECTTE--EECC-CCSSCEEEEEECTTTCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTC
T ss_pred CcceeeccccCcce--eeee-ccCCcEEEEEEecCCCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccc
Confidence 34677877665544 3443 7899999999999 99999998887 999999999876554443
Q ss_pred ---cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCe-EEEEeecCCCCeEEEEe
Q 017642 174 ---FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS-LVLVCPGLQKGQVRVEH 245 (368)
Q Consensus 174 ---~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~g~~dg~i~i~~ 245 (368)
|...|.+++|+| ++.+++ .|+.|++||+++++.+..+. +...+..+.+.+.+.. .++++ |+.|+.|++|+
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d 172 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAV-GTRGPKVQLCD 172 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEE-EESSSSEEEEE
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEE-EcCCCeEEEEe
Confidence 888999999999 666666 48999999999999888876 6778889999886542 13333 67899999988
Q ss_pred cCc-ceeeeeeccCcceEEEEECCCCC-EEEEEeCCCcEEEEEECCCCc-eeEeeEe-------------ccCcccEEEE
Q 017642 246 YAS-KRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLDGT-LLQEVRR-------------GADRAEIYSL 309 (368)
Q Consensus 246 ~~~-~~~~~~~~~~~~i~~v~~sp~g~-~l~s~~~dg~~i~iwd~~~~~-~~~~~~~-------------~~~~~~v~~l 309 (368)
... ..+..+..|...|.+++|+|+++ +|++++.||. |++||++++. .+..+.. ..|...|.++
T Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 173 LKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR-VKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC-EEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred CCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc-EEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 664 56677888999999999999998 6999999999 9999998765 3333311 1267899999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 310 AFSSNAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 310 ~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+|+|++++|++++.||.|++||+.+++....
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLV 282 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCcccee
Confidence 9999999999999999999999998876543
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=5.6e-25 Score=197.98 Aligned_cols=223 Identities=14% Similarity=0.124 Sum_probs=178.5
Q ss_pred EEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEE-EecCCCCCCCCCcEEEEeCCCCcEEEEEecCC
Q 017642 99 CFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS 176 (368)
Q Consensus 99 ~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~ 176 (368)
++++++ |+.|++||+++++.. ..+. .+ ..+.++.|++++..+ ++++.| +.|++||+.+++.+..+.+..
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~--~~~~-~~-~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~ 74 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVT--ATIP-VG-SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPAGS 74 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEE--EEEE-CS-SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECSS
T ss_pred EEEEcCCCCEEEEEECCCCeEE--EEee-cC-CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEECCC
Confidence 566666 888999999876554 3443 22 347899999988654 666566 999999999999999998777
Q ss_pred ceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc-ee
Q 017642 177 EVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RT 251 (368)
Q Consensus 177 ~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~ 251 (368)
.+.+++|+|++..++ .++.|++||+++++.+..+..+ ..+..++|+++++.++++ ++.++.|++|+.... .+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVT--NNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEE--ETTTTEEEEEETTTTEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEE--eCCCCEEEEEECCCCcEE
Confidence 999999999998775 3689999999999988887654 467889999999875443 567999999987654 44
Q ss_pred eeeeccCcceEEEEECCCCCEE-EEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEe---CCCeE
Q 017642 252 KFIMAHDSRIACFALTQDGQLL-ATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS---DKGTV 327 (368)
Q Consensus 252 ~~~~~~~~~i~~v~~sp~g~~l-~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s---~dg~i 327 (368)
..+..+ ..+.+++|+|++++| ++++.++. |++||+++++.+..+. +...+.+++|+|++++|++++ .++.|
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~v 226 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVK---VEAAPSGIAVNPEGTKAYVTNVDKYFNTV 226 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSEEEEEEECTTSSEEEEEEECSSCCEE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEe---cCCCccceEECCCCCEEEEEecCcCCCcE
Confidence 444444 557999999999977 57778888 9999999998887776 345789999999999998887 68999
Q ss_pred EEEEccCCCCC
Q 017642 328 HVFNLKVNSGS 338 (368)
Q Consensus 328 ~iwd~~~~~~~ 338 (368)
++||+.+++..
T Consensus 227 ~~~d~~~~~~~ 237 (391)
T 1l0q_A 227 SMIDTGTNKIT 237 (391)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCeEE
Confidence 99999877543
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.2e-25 Score=205.12 Aligned_cols=218 Identities=9% Similarity=0.045 Sum_probs=171.9
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCC----ceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.|.+.|.+++|||+|++||+++ |+.|+||+.+. ....+. .+ ...+.+++|+|++..+++++.| |+
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-----Gt 152 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-----GE 152 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT-----SE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC-----CE
Confidence 5678999999999999999999 88899999543 333343 12 2258899999999999999998 99
Q ss_pred EEEEeCCCCc-------EEEEEe-----cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeE---EEEE-eccCCCeeE
Q 017642 158 VMIWDDHQSR-------CIGELS-----FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKL---LHQI-ETIANPKGL 219 (368)
Q Consensus 158 i~vwd~~~~~-------~~~~~~-----~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~---~~~~-~~~~~~v~~ 219 (368)
|++||+.+++ .+.++. |...|.+++|+||| +++ .|+.|++||+.+++. .+++ ..|...|..
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~s 231 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITD 231 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEE
Confidence 9999999885 356663 56799999999999 555 699999999987763 3556 367789999
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCcceeeeee-ccCcceEEEEE--CCCCCEEEEEeCCCcEEEEEECCC------
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFAL--TQDGQLLATSSTKGTLVRIFNTLD------ 290 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~-~~~~~i~~v~~--sp~g~~l~s~~~dg~~i~iwd~~~------ 290 (368)
++|+ ++ .+++ ++ ++.|++|+..+.....+. +|...|..++| +|++..|+++++||. ++|....
T Consensus 232 vaFs--g~--~LAS-a~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~--klw~~d~~~~spd 303 (588)
T 2j04_A 232 LKIV--DY--KVVL-TC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY--KVLLEDELHVTAD 303 (588)
T ss_dssp EEEE--TT--EEEE-EC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE--EEEESSSEEEECC
T ss_pred EEEE--CC--EEEE-Ee-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC--EEEeeccEEECCC
Confidence 9999 44 3454 33 699999998887775544 89999999999 999999999999985 8888641
Q ss_pred -----------------CceeEeeEeccCcccEEEEEEecCCCEEEEEe
Q 017642 291 -----------------GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (368)
Q Consensus 291 -----------------~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s 322 (368)
+..+..+. +...|.+++|+|||+.+|+++
T Consensus 304 ~~l~a~~d~~v~lW~~~g~~l~~~~---~~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 304 NIIAPYLEKKFKKWSTIWNEFNNYE---TTLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp CSSHHHHHHHHHHTTTTTTSSSSSC---CEEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCEEEEEECCCCceeeec---cceEEEEEEECCCCCEEEEEE
Confidence 11111111 234699999999999999886
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=7.5e-26 Score=220.43 Aligned_cols=199 Identities=13% Similarity=0.166 Sum_probs=171.3
Q ss_pred CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC--CCcEEEEEe-cCCceeEEEEeeC--ccEEE---eCCcEEE
Q 017642 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGELS-FRSEVRSVKLRRD--RIIVV---LEQKIFV 198 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~--~~~~~~~~~-~~~~v~~~~~~~~--~~~l~---~d~~i~v 198 (368)
+|...|.++.|++++..+++++.| |.|++||+. +++.+..+. |.+.|.+++|+++ +.+++ .||.|++
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 888999999999999999998887 999999987 456677777 9999999999987 87777 5999999
Q ss_pred EEcCCCe--EEEEEeccCCCeeEEEEecC--CCeEEEEeecCCCCeEEEEecCcc---eeeeeeccCcceEEEEECC---
Q 017642 199 YNFADLK--LLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQ--- 268 (368)
Q Consensus 199 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~v~~sp--- 268 (368)
||+++++ .+..+..|...|.+++|+|+ ++. +++ |+.||.|++|+.... ....+..|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~--l~s-gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPL--LLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSE--EEE-EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCE--EEE-EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999887 67777889999999999999 664 443 668999999987664 3445678999999999999
Q ss_pred ----------CCCEEEEEeCCCcEEEEEECCCC----ceeEeeEeccCcccEEEEEEecC---CCEEEEEeCCCeEEEEE
Q 017642 269 ----------DGQLLATSSTKGTLVRIFNTLDG----TLLQEVRRGADRAEIYSLAFSSN---AQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 269 ----------~g~~l~s~~~dg~~i~iwd~~~~----~~~~~~~~~~~~~~v~~l~~sp~---~~~l~s~s~dg~i~iwd 331 (368)
++.+|++|+.||. |++||++++ .....+.. |...|.+++|+|+ +++|++++.||.|++||
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp --------CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred ccccccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 5899999999999 999999887 44455555 7889999999999 89999999999999999
Q ss_pred ccCCC
Q 017642 332 LKVNS 336 (368)
Q Consensus 332 ~~~~~ 336 (368)
+.+++
T Consensus 236 ~~~~~ 240 (753)
T 3jro_A 236 QDNEQ 240 (753)
T ss_dssp ESSSS
T ss_pred CCCCC
Confidence 99875
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=7.5e-25 Score=191.23 Aligned_cols=202 Identities=16% Similarity=0.258 Sum_probs=161.8
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEE-------------------------------------
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRD------------------------------------- 123 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~------------------------------------- 123 (368)
..|...|++++|+|+|++|++|+ |+.|++|++++++......
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~ 143 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHV 143 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeE
Confidence 46888999999999999999999 8889999988765432111
Q ss_pred --cccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEE----EEE-ecCCceeEEEEeeCccEEE-----
Q 017642 124 --FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI----GEL-SFRSEVRSVKLRRDRIIVV----- 191 (368)
Q Consensus 124 --~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~----~~~-~~~~~v~~~~~~~~~~~l~----- 191 (368)
+ ..|...+..+.+.+++..+++++.| +.|++||+.+++.. ... .+.+.|.++.+.+++..++
T Consensus 144 ~~~-~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 217 (318)
T 4ggc_A 144 ATL-SGHSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG 217 (318)
T ss_dssp EEE-ECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEEC
T ss_pred EEE-cCccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEec
Confidence 1 2345556677777778888888887 99999999876532 222 3788999999999765433
Q ss_pred -eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCC
Q 017642 192 -LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQD 269 (368)
Q Consensus 192 -~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~ 269 (368)
.++.|++||.+........ .+...+..+.++++++.+++++ |+.|+.|++|+.. ++.+..+.+|.+.|++|+|+|+
T Consensus 218 ~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~s-g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd 295 (318)
T 4ggc_A 218 TSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGH-GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 295 (318)
T ss_dssp TTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEE-CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred CCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEE-EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 4789999999888776655 4667888999999999866554 7789999998865 5777889999999999999999
Q ss_pred CCEEEEEeCCCcEEEEEECCCCc
Q 017642 270 GQLLATSSTKGTLVRIFNTLDGT 292 (368)
Q Consensus 270 g~~l~s~~~dg~~i~iwd~~~~~ 292 (368)
|++|++|+.||. |+|||+.+..
T Consensus 296 g~~l~S~s~D~~-v~iWd~~~~d 317 (318)
T 4ggc_A 296 GATVASAAADET-LRLWRCFELD 317 (318)
T ss_dssp SSCEEEEETTTE-EEEECCSCCC
T ss_pred CCEEEEEecCCe-EEEEECCCCC
Confidence 999999999999 9999987653
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=6.3e-25 Score=193.62 Aligned_cols=200 Identities=12% Similarity=0.151 Sum_probs=167.2
Q ss_pred CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCC----cEEEEEe-cCCceeEEEEee--CccEEE---eCCcE
Q 017642 127 GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS-FRSEVRSVKLRR--DRIIVV---LEQKI 196 (368)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~----~~~~~~~-~~~~v~~~~~~~--~~~~l~---~d~~i 196 (368)
+|...|.++.|++++..+++++.| |.|++||+.++ +....+. |...|.+++|++ ++.+++ .|+.|
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v 83 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV 83 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ccccceeEEEEcCCCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE
Confidence 788999999999999999999888 99999999876 4566666 999999999999 577777 58999
Q ss_pred EEEEcCCC---------eEEEEEeccCCCeeEEEEecC--CCeEEEEeecCCCCeEEEEecCc-ceeeee----------
Q 017642 197 FVYNFADL---------KLLHQIETIANPKGLCAVSQG--VGSLVLVCPGLQKGQVRVEHYAS-KRTKFI---------- 254 (368)
Q Consensus 197 ~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~---------- 254 (368)
++||++++ +.+..+..|...+.+++|+++ ++. +++ ++.||.|++|+... +.+..+
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLK--LAC-LGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSE--EEE-EETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcE--EEE-ecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999887 667888889999999999999 764 443 66899999998654 222222
Q ss_pred ---eccCcceEEEEECCC---CCEEEEEeCCCcEEEEEECCCCce--eEeeEeccCcccEEEEEEecCC----CEEEEEe
Q 017642 255 ---MAHDSRIACFALTQD---GQLLATSSTKGTLVRIFNTLDGTL--LQEVRRGADRAEIYSLAFSSNA----QWLAVSS 322 (368)
Q Consensus 255 ---~~~~~~i~~v~~sp~---g~~l~s~~~dg~~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~sp~~----~~l~s~s 322 (368)
..|...+.+++|+|+ +.+|++++.++. +.+|+...++. +..+.. |...|.+++|+|++ ++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~--h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA-IIYQRGKDGKLHVAAKLPG--HKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE-EEEEECTTSCEEEEEECCC--CCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCc-EEEEccCCCceeeeeecCC--CCcceeEEEECCCCCCcceEEEEEc
Confidence 257788999999997 889999999999 98888877765 445554 78899999999998 8999999
Q ss_pred CCCeEEEEEccCCCC
Q 017642 323 DKGTVHVFNLKVNSG 337 (368)
Q Consensus 323 ~dg~i~iwd~~~~~~ 337 (368)
.||.|++||++++..
T Consensus 238 ~dg~i~iwd~~~~~~ 252 (351)
T 3f3f_A 238 KDGRIRIFKITEKLS 252 (351)
T ss_dssp TTSCEEEEEEEECC-
T ss_pred CCCeEEEEeCCCCcC
Confidence 999999999998644
No 123
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.3e-25 Score=196.16 Aligned_cols=229 Identities=11% Similarity=0.021 Sum_probs=171.2
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCeEEEEEecCC-------CcceEEEcccCCceeEEEEEEeC--CeEEEEecCCCCCCCC
Q 017642 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPF-------REIFRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQYPL 155 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~d~~~~~ 155 (368)
..|.++.|+|+ +++++ |+.|++|+.+.. .......+...+...+.++.+++ ++..+++++.|
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d----- 148 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNR----- 148 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETT-----
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-----
Confidence 45666777777 77777 888999976521 11111222225667899999999 88999988888
Q ss_pred CcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEE-EEEec-cCCCeeEEEEecCCCe
Q 017642 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLL-HQIET-IANPKGLCAVSQGVGS 228 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~ 228 (368)
+.|++||+++++.+..+. +...|.+++|+|++.+++ .|+.|++||+++++.+ ..+.. |...|.+++|+|++..
T Consensus 149 g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~ 228 (343)
T 3lrv_A 149 GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW 228 (343)
T ss_dssp CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE
T ss_pred CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE
Confidence 999999999999877664 566899999999999988 5899999999999877 77887 8999999999999985
Q ss_pred EEEEeecCCCCeEEEEecCcc-eeeeee---ccCcceE--EEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEecc
Q 017642 229 LVLVCPGLQKGQVRVEHYASK-RTKFIM---AHDSRIA--CFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGA 301 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~~-~~~~~~---~~~~~i~--~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~ 301 (368)
+++ ++ ++.|++|+.... .+..+. .|...+. +++|+|+|++|++++. |+. |+||++.+.......
T Consensus 229 --l~s-~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~-i~v~~~~~~~~~~~~---- 299 (343)
T 3lrv_A 229 --MVV-EC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNS-LTIYKFDKKTKNWTK---- 299 (343)
T ss_dssp --EEE-EE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCSEEE----
T ss_pred --EEE-Ee-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCc-EEEEEEcccccceEe----
Confidence 443 44 559999987653 223333 2444444 6999999999999998 888 999999766543332
Q ss_pred CcccEEEEEEec---CCCEEEEEeCCCeEEEEEcc
Q 017642 302 DRAEIYSLAFSS---NAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 302 ~~~~v~~l~~sp---~~~~l~s~s~dg~i~iwd~~ 333 (368)
.++..++|.+ +++.|++++.||.++++-..
T Consensus 300 --~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 300 --DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp --EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred --cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 3577888888 88899999999998887543
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=2e-24 Score=192.25 Aligned_cols=208 Identities=15% Similarity=0.145 Sum_probs=161.7
Q ss_pred EEcccCCceeEEEEEEeCC---eEEEEecCCCCCCCCCcEEEEeCCC-CcEE-EEEe-cCCceeEEEEeeCccEEE---e
Q 017642 122 RDFERGGGIGVVEMLFRCN---ILALVGGGPDPQYPLNKVMIWDDHQ-SRCI-GELS-FRSEVRSVKLRRDRIIVV---L 192 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~---~~~~~s~~~d~~~~~~~i~vwd~~~-~~~~-~~~~-~~~~v~~~~~~~~~~~l~---~ 192 (368)
..+. .|...|.+++|+++ +..+++++.| |.|++||+.+ ++.+ ..+. |...|.+++|+|++.+++ .
T Consensus 33 ~~~~-~h~~~v~~~~~~~~~~~g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 33 EVTS-SPDDSIGCLSFSPPTLPGNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp ECSS-CCSSCEEEEEECCTTSSSEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred Eecc-CCCCceEEEEEcCCCCCceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 3443 88999999999998 5888888887 9999999987 5554 5555 999999999999998887 5
Q ss_pred CCcEEEEEcCCCeEEEEEeccCCCeeEEEE--ecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeecc------------
Q 017642 193 EQKIFVYNFADLKLLHQIETIANPKGLCAV--SQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAH------------ 257 (368)
Q Consensus 193 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~------------ 257 (368)
|+.|++||+++++.+. +..|...+.+++| ++++. ++++ ++.||.|++|+... +.+..+..+
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~--~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS--CVMT-GSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPM 182 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE--EEEE-EETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTE
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCC--EEEE-ccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCe
Confidence 8999999999998776 4568999999999 66654 3444 66899999998654 322222222
Q ss_pred -----------------------------CcceEEEEECCCCCE----EEEEeCCCcEEEEEECCCC---ceeEeeEecc
Q 017642 258 -----------------------------DSRIACFALTQDGQL----LATSSTKGTLVRIFNTLDG---TLLQEVRRGA 301 (368)
Q Consensus 258 -----------------------------~~~i~~v~~sp~g~~----l~s~~~dg~~i~iwd~~~~---~~~~~~~~~~ 301 (368)
...+.++.+.++... +++++.||. |++||+... +.+..+..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~~~~-- 259 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFTFKC-- 259 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEEEEC--
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCccccceeeee--
Confidence 123445555444433 999999999 999999887 55666665
Q ss_pred Ccc------------cEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCCCCC
Q 017642 302 DRA------------EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSARSE 342 (368)
Q Consensus 302 ~~~------------~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 342 (368)
|.. .|.+++|+|++++|++++.||.|++||+.+++......
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 312 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE 312 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec
Confidence 443 69999999999999999999999999999876654443
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.93 E-value=1.3e-24 Score=196.00 Aligned_cols=242 Identities=12% Similarity=0.135 Sum_probs=162.0
Q ss_pred CEEEEEEc---CC-CCEEEEEeCCeEEEEEecCCCc--------ceEEEcccCCceeEEEEE------------------
Q 017642 87 TLLHISFN---QD-HGCFAAGTDHGFRIYNCDPFRE--------IFRRDFERGGGIGVVEML------------------ 136 (368)
Q Consensus 87 ~v~~~~~s---~~-g~~l~~~~d~~i~iw~~~~~~~--------~~~~~~~~~~~~~~~~~~------------------ 136 (368)
..+++.|. ++ ..++++|.++.|++|+...... .....+ .+...+..+.
T Consensus 17 ~p~~~~w~~~~~~~~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (393)
T 4gq1_A 17 RPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTI--QTGLPTLHLSFSSSCSYSENLHDGDGNV 94 (393)
T ss_dssp CEEEEEECTTSGGGTTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEE--ECSSCEEEEEECTTCEEECC--------
T ss_pred CCeEEEEeCCCCCCCCEEEEECCCCEEEEECCCCCcccccccceeeeEEE--ecCCCeeeEeecCCccccccccCCCcce
Confidence 45667774 33 4577778899999998743211 001111 1222222222
Q ss_pred --EeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEE-----Ee-cCCceeEEEEee--------CccEEE---eCCcEE
Q 017642 137 --FRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE-----LS-FRSEVRSVKLRR--------DRIIVV---LEQKIF 197 (368)
Q Consensus 137 --~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~-----~~-~~~~v~~~~~~~--------~~~~l~---~d~~i~ 197 (368)
+.++...+++++.| ++|+|||+++++.... +. |.+.|.+++|+| |+++++ .|++|+
T Consensus 95 ~~~~~~~~~las~~~d-----~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~ 169 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQD-----NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLI 169 (393)
T ss_dssp --CCEEEEEEEEEETT-----SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEE
T ss_pred eecCCCCCEEEEEeCC-----CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEE
Confidence 23456678888888 9999999988865432 23 899999999998 788888 599999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCccee--------------------------
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT-------------------------- 251 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~-------------------------- 251 (368)
|||++++.++..+..|...+.+++|+|++..++ + +|+.|+.|++|+......
T Consensus 170 ~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l-~-~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 170 IWRLTDEGPILAGYPLSSPGISVQFRPSNPNQL-I-VGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp EEEEETTEEEEEEEECSSCEEEEEEETTEEEEE-E-EEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred EEECCCCceeeeecCCCCCcEEEEECCCCCceE-E-ecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 999998888888888999999999999986533 3 377899999998764221
Q ss_pred eeeeccCcceEEEEEC-CCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEE------------------EEe
Q 017642 252 KFIMAHDSRIACFALT-QDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL------------------AFS 312 (368)
Q Consensus 252 ~~~~~~~~~i~~v~~s-p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l------------------~~s 312 (368)
....+|...+.++.|+ ++|+.|++++.|+. +++||+..++....+.. |...+..+ .|+
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFANNDYNEISD--STMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC---------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCC-EEEEECccCCCCceEee--ecCccccEEEccccccccccCcceeEEEc
Confidence 1123577788899986 79999999999999 99999988776655554 33333333 333
Q ss_pred c--CCCEEEEEeCCCeEEEEEccCCCCCCC
Q 017642 313 S--NAQWLAVSSDKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 313 p--~~~~l~s~s~dg~i~iwd~~~~~~~~~ 340 (368)
+ ++.++++|+.||+|+|||+.+++....
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTCCEE
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 3 344677888999999999998876543
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=6.9e-24 Score=182.05 Aligned_cols=195 Identities=9% Similarity=0.028 Sum_probs=136.3
Q ss_pred CCCCCEEEEEEcCC----CCEEEEEe---------------------CCeEEEEEecCCCcceEEEcccCCceeEEEEEE
Q 017642 83 SPPPTLLHISFNQD----HGCFAAGT---------------------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF 137 (368)
Q Consensus 83 ~h~~~v~~~~~s~~----g~~l~~~~---------------------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (368)
.+...|.+++|+|| +++++.++ |+.|++|++.+..........+.....+..+++
T Consensus 109 ~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 109 LEIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp SSEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE
T ss_pred ccccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeec
Confidence 44557777788887 66666543 555777777443322222111345555555655
Q ss_pred -eCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cC---CceeEEEEeeCccEEE---------------eCCcEE
Q 017642 138 -RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FR---SEVRSVKLRRDRIIVV---------------LEQKIF 197 (368)
Q Consensus 138 -~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~---~~v~~~~~~~~~~~l~---------------~d~~i~ 197 (368)
.+++.++++++.| ++|+|||+++|++++++. |. ..+.+++|+|++.+++ .|++|+
T Consensus 189 ~~g~~~~LaSgS~D-----~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIk 263 (356)
T 2w18_A 189 VQGMQEALLGTTIM-----NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLI 263 (356)
T ss_dssp EETSTTEEEEEETT-----SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEE
T ss_pred cCCCCceEEEecCC-----CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEE
Confidence 4577888998888 999999999999999997 33 3677889999998863 478999
Q ss_pred EEEcCCCeEEEEEe-----ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceE-EEEECCCC
Q 017642 198 VYNFADLKLLHQIE-----TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIA-CFALTQDG 270 (368)
Q Consensus 198 vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~-~v~~sp~g 270 (368)
+||..+++.+..+. +|...+. ..+.++. +++ +|+.|++|+||+... +.+.++.+|...+. +++|+|||
T Consensus 264 lWd~~tgk~l~v~~~~~p~Gh~~~~l--sg~~sg~--~lA-SgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 264 VINPKTTLSVGVMLYCLPPGQAGRFL--EGDVKDH--CAA-AILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEETTTTEEEEEEEECCCTTCCCCEE--EEEEETT--EEE-EEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS
T ss_pred EEECCCCEEEEEEEeeccCCCcceeE--ccccCCC--EEE-EEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC
Confidence 99999998877652 3333322 2222333 344 478999999988776 56777888877655 68999999
Q ss_pred CEEEEEeCCCcEEEEEEC
Q 017642 271 QLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~ 288 (368)
++|++|+.|++ |+|||+
T Consensus 339 ~~LaSGS~D~T-IklWd~ 355 (356)
T 2w18_A 339 SHLLAGQKDGN-IFVYHY 355 (356)
T ss_dssp SEEEEECTTSC-EEEEEE
T ss_pred CEEEEEECCCc-EEEecC
Confidence 99999999999 999995
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=1.4e-22 Score=183.93 Aligned_cols=226 Identities=12% Similarity=0.041 Sum_probs=171.5
Q ss_pred CCEEEEEe-C------CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEE
Q 017642 97 HGCFAAGT-D------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (368)
Q Consensus 97 g~~l~~~~-d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~ 169 (368)
+..++.++ + +.|++||++... . ..+. .+...+.++.|+|++..++.++.+. .+..|++||+.+++..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~--~~l~-~~~~~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN-Q--FVVH-RSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVR 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS-C--EEEE-EESSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC-C--EEEe-CCCCcceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEE
Confidence 55565555 3 469999987433 2 2332 5667889999999998777766540 0138999999999887
Q ss_pred EEEecCCceeEEEEeeCccEEE-e---C--CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCC--eE
Q 017642 170 GELSFRSEVRSVKLRRDRIIVV-L---E--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG--QV 241 (368)
Q Consensus 170 ~~~~~~~~v~~~~~~~~~~~l~-~---d--~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg--~i 241 (368)
....+...+.+++|+|||+.++ . + ..|++||+++++. ..+..+...+..++|+|+|+.+++.. ..++ .|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s--~~~g~~~i 293 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTS--DQAGRPQV 293 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEE--CTTSSCEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEE--CCCCCcEE
Confidence 5555888999999999998776 2 3 3599999988876 55666778899999999999755433 3345 56
Q ss_pred EEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCC---CcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEE
Q 017642 242 RVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK---GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWL 318 (368)
Q Consensus 242 ~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~d---g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 318 (368)
.+|+........+..+...+.+++|+|+|++|++++.+ .. |++||+.+++.. .+.. +. .+.+++|+|||++|
T Consensus 294 ~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~~~~~~~-~l~~--~~-~~~~~~~spdg~~l 368 (415)
T 2hqs_A 294 YKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDLATGGVQ-VLSS--TF-LDETPSLAPNGTMV 368 (415)
T ss_dssp EEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEETTTCCEE-ECCC--SS-SCEEEEECTTSSEE
T ss_pred EEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEECCCCCEE-EecC--CC-CcCCeEEcCCCCEE
Confidence 66777766666667777889999999999999888764 46 999999988874 4444 33 78999999999999
Q ss_pred EEEeCCC---eEEEEEccCCC
Q 017642 319 AVSSDKG---TVHVFNLKVNS 336 (368)
Q Consensus 319 ~s~s~dg---~i~iwd~~~~~ 336 (368)
++++.++ .|++||+..+.
T Consensus 369 ~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEEETTEEEEEEEETTSCC
T ss_pred EEEEcCCCccEEEEEECCCCc
Confidence 9888776 79999987543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=5.8e-23 Score=186.36 Aligned_cols=245 Identities=13% Similarity=0.062 Sum_probs=174.4
Q ss_pred CCEEEEEEcCCCC-EEEEEe-----CC----eEEEEEe--cCCCcceEEEcccCCceeEEEEEEe---------------
Q 017642 86 PTLLHISFNQDHG-CFAAGT-----DH----GFRIYNC--DPFREIFRRDFERGGGIGVVEMLFR--------------- 138 (368)
Q Consensus 86 ~~v~~~~~s~~g~-~l~~~~-----d~----~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 138 (368)
..+....|++.|. ++++|+ ++ .++|||+ .+++......+. .+...+..+++.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK-VNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE-ECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE-cChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 3577778888875 555665 35 6999999 777755444443 443333333332
Q ss_pred -CCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eC---CcEEEEEcCCCeEEEEEe
Q 017642 139 -CNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LE---QKIFVYNFADLKLLHQIE 211 (368)
Q Consensus 139 -~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d---~~i~vwd~~~~~~~~~~~ 211 (368)
...+++++.... .-..+.|++||+..+.......|...+.+++|+|||+.++ .+ ..|++||+++++.. .+.
T Consensus 142 ~~~~l~~~s~~~~-~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~ 219 (415)
T 2hqs_A 142 FRTRIAYVVQTNG-GQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA 219 (415)
T ss_dssp TTCEEEEEEECSS-SSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE
T ss_pred CCCEEEEEEecCC-CCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee
Confidence 334444443321 0001589999987554433334899999999999999887 34 39999999998875 455
Q ss_pred ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeC-CC--cEEEEEEC
Q 017642 212 TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST-KG--TLVRIFNT 288 (368)
Q Consensus 212 ~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~-dg--~~i~iwd~ 288 (368)
.+...+.+++|+|||+.++++.+...+..|++|+........+..|...+.+++|+|||++|++++. ++ . |.+||+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~-i~~~d~ 298 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ-VYKVNI 298 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCE-EEEEET
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcE-EEEEEC
Confidence 6777899999999999755443222234478888877777788888899999999999998888876 44 5 778898
Q ss_pred CCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCC---CeEEEEEccCCCC
Q 017642 289 LDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK---GTVHVFNLKVNSG 337 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~d---g~i~iwd~~~~~~ 337 (368)
.+++.. .+.. +...+.+++|+|||++|++++.+ ..|++||+.+++.
T Consensus 299 ~~~~~~-~l~~--~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 299 NGGAPQ-RITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp TSSCCE-ECCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred CCCCEE-EEec--CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 887743 3433 45678999999999999988754 5899999988765
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=1.2e-21 Score=172.64 Aligned_cols=238 Identities=11% Similarity=0.103 Sum_probs=167.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-C-CeEEEEEec--CCCcceEEEcccCCceeEEEEEEeCCeEEE-EecCCCCCCCCCc
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-D-HGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFRCNILAL-VGGGPDPQYPLNK 157 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d-~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~d~~~~~~~ 157 (368)
.|...+.+++|+|+|++|++++ + +.|++|+++ ++.......+. .+. .+..+.|++++..+ +++..+ +.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~s~dg~~l~~~~~~~-----~~ 107 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-LPG-SLTHISTDHQGQFVFVGSYNA-----GN 107 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE-CSS-CCSEEEECTTSSEEEEEETTT-----TE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccc-cCC-CCcEEEEcCCCCEEEEEecCC-----Ce
Confidence 3556788899999999888887 4 679999998 44433333443 222 66788899887654 444444 88
Q ss_pred EEEEeCC---CCcEEEEEecCCceeEEEEeeCccEEE----eCCcEEEEEcCC-CeEEE----EEec-cCCCeeEEEEec
Q 017642 158 VMIWDDH---QSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFAD-LKLLH----QIET-IANPKGLCAVSQ 224 (368)
Q Consensus 158 i~vwd~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~-~~~~~----~~~~-~~~~v~~~~~~~ 224 (368)
|.+||+. ..+.+..+.....+.+++|+|++++++ .++.|++||+.+ ++... .+.. ....+..++|+|
T Consensus 108 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 187 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP 187 (343)
T ss_dssp EEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT
T ss_pred EEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECC
Confidence 9999984 344555555666799999999998666 478999999987 65432 2222 234667899999
Q ss_pred CCCeEEEEeecCCCCeEEEEecCc--ce---eeeee---cc---CcceEEEEECCCCCEEEE-EeCCCcEEEEEECC--C
Q 017642 225 GVGSLVLVCPGLQKGQVRVEHYAS--KR---TKFIM---AH---DSRIACFALTQDGQLLAT-SSTKGTLVRIFNTL--D 290 (368)
Q Consensus 225 ~~~~~~l~~~g~~dg~i~i~~~~~--~~---~~~~~---~~---~~~i~~v~~sp~g~~l~s-~~~dg~~i~iwd~~--~ 290 (368)
+++.++++ +..++.|.+|+... .. ...+. .. ...+..++|+|+|++|++ +..++. |++||+. +
T Consensus 188 dg~~l~~~--~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~ 264 (343)
T 1ri6_A 188 NEQYAYCV--NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDG 264 (343)
T ss_dssp TSSEEEEE--ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTS
T ss_pred CCCEEEEE--eCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCC
Confidence 99865543 45689999988743 21 11221 11 235678999999997774 446888 9999998 3
Q ss_pred C--ceeEeeEeccCcccEEEEEEecCCCEEEEEe-CCCeEEEEEcc
Q 017642 291 G--TLLQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLK 333 (368)
Q Consensus 291 ~--~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~ 333 (368)
+ +.+..+.. + ..+.+++|+|+|++|++++ .++.|.+|+++
T Consensus 265 ~~~~~~~~~~~--~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 265 SVLSKEGFQPT--E-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CCEEEEEEEEC--S-SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CceEEeeeecC--C-CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 2 34444443 2 3488999999999888887 68999999775
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.7e-21 Score=182.24 Aligned_cols=248 Identities=11% Similarity=0.054 Sum_probs=186.1
Q ss_pred CCCCEEEEEEcC----CCCEEEEEe--CCeEEEEEecCCCcceEEEccc--------CCceeEEEEEEeCC-eEEEEecC
Q 017642 84 PPPTLLHISFNQ----DHGCFAAGT--DHGFRIYNCDPFREIFRRDFER--------GGGIGVVEMLFRCN-ILALVGGG 148 (368)
Q Consensus 84 h~~~v~~~~~s~----~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-~~~~~s~~ 148 (368)
+...+..++|+| ||++|++++ ++.|.|||..+.+......... .....+..+.++++ ..++++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 455689999999 999998887 7889999988776653332210 01225778888874 45666666
Q ss_pred CCCCCCCCcEEEEeCCCCcEEE--EEecCCceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEEEec----cCCCee
Q 017642 149 PDPQYPLNKVMIWDDHQSRCIG--ELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIET----IANPKG 218 (368)
Q Consensus 149 ~d~~~~~~~i~vwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~----~~~~v~ 218 (368)
.+ +.|.+||..+++.+. .+.+...+.++.|+|++++++ .+++|.+||+.+++++..+.. |.+...
T Consensus 300 ~~-----g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 300 ET-----GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp TT-----TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred CC-----CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 66 999999998876544 555777899999999999765 378999999999999888864 332222
Q ss_pred EEEEecCCCeEEEEeecCCCCeEEEEecC--------cceeeeeeccCcceEEEEECCCCCEEEEEe-------CCCcEE
Q 017642 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYA--------SKRTKFIMAHDSRIACFALTQDGQLLATSS-------TKGTLV 283 (368)
Q Consensus 219 ~~~~~~~~~~~~l~~~g~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~-------~dg~~i 283 (368)
.+ ++|++..+ +++....|++|.+|+.. .+.++++..|...+..|+++|+|++|++++ .+++ |
T Consensus 375 ~~-~~p~~g~~-~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~-v 451 (543)
T 1nir_A 375 NF-VHPKYGPV-WSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS-V 451 (543)
T ss_dssp EE-EETTTEEE-EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC-E
T ss_pred cc-CCCCCccE-EEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce-E
Confidence 22 46775553 44433358999998765 467788899988889999999999999987 2668 9
Q ss_pred EEEECCCCcee-EeeEe------ccCcccEEEEEEecCCCEEEEEe-----CCCeEEEEEccCCCCCC
Q 017642 284 RIFNTLDGTLL-QEVRR------GADRAEIYSLAFSSNAQWLAVSS-----DKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 284 ~iwd~~~~~~~-~~~~~------~~~~~~v~~l~~sp~~~~l~s~s-----~dg~i~iwd~~~~~~~~ 339 (368)
.|||+.+++.. ..+.. ..+...+..+.|+|+|+.|+++. .|+.|.|||.++++...
T Consensus 452 ~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 519 (543)
T 1nir_A 452 AVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKA 519 (543)
T ss_dssp EEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred EEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEE
Confidence 99999999877 33321 11456899999999999888662 47999999999987653
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=3.6e-21 Score=169.05 Aligned_cols=242 Identities=9% Similarity=0.061 Sum_probs=169.0
Q ss_pred CCCCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC--cEE
Q 017642 84 PPPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN--KVM 159 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~--~i~ 159 (368)
+...+ +++|+|+|++|++++ ++.|.+||+.+++.. ...+. .+.....++.+++++..++....+ ++ .|.
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~-~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~----~~~~~i~ 111 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK-VVAIQ-EGQSSMADVDITPDDQFAVTVTGL----NHPFNMQ 111 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE-EEEEE-ECSSCCCCEEECTTSSEEEECCCS----SSSCEEE
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee-EEecc-cCCCCccceEECCCCCEEEEecCC----CCcccEE
Confidence 34456 999999999776665 667999999876651 23332 233333337888888766654432 12 899
Q ss_pred EEeCCCCcEEEEEecCCceeEEEEeeCccEEE----eCCc-EEEEEcCCCeEE----EEEeccCCCeeEEEEecCCCeEE
Q 017642 160 IWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQK-IFVYNFADLKLL----HQIETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 160 vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~-i~vwd~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~ 230 (368)
+||+.+++.+..+.......+++|+|+|++++ .++. |.+|++.....+ ............++|+|+++.++
T Consensus 112 v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAF 191 (331)
T ss_dssp EEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEE
T ss_pred EEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEE
Confidence 99999999998888777789999999997554 2477 999998753322 11112344567899999998755
Q ss_pred EEeecCCCCeEEEEecCc-ce---eeeeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCce--eEeeEec--c
Q 017642 231 LVCPGLQKGQVRVEHYAS-KR---TKFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL--LQEVRRG--A 301 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~~-~~---~~~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~--~~~~~~~--~ 301 (368)
++ +..++.|++|+... +. +..+.. ...+..++|+|+|++|++++ .++. |.+||+.+++. +..+... .
T Consensus 192 v~--~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 192 VA--NLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVD-VFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp EE--ETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEE-EEEEETTTTEEEEEEEEECCCCC
T ss_pred EE--eCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCE-EEEEECCCCceeeeccccccccc
Confidence 54 45688999988764 33 444443 45678999999999776655 4667 99999998877 4433321 0
Q ss_pred Ccc---cEEEEEEecCCCEEEEEe-CCCeEEEEEccCCC
Q 017642 302 DRA---EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (368)
Q Consensus 302 ~~~---~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~~~~ 336 (368)
+.. ....++|+|||++|++++ .++.|++||+.+..
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 111 235689999999886655 56799999998754
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.5e-21 Score=171.51 Aligned_cols=239 Identities=9% Similarity=-0.001 Sum_probs=176.0
Q ss_pred CEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccC--CceeEEEEEEeCCeEEEEecC------------CC
Q 017642 87 TLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERG--GGIGVVEMLFRCNILALVGGG------------PD 150 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~------------~d 150 (368)
.+.+++|+|+|++++++. ++.|.+||+.+++......+.+. +...+..+.+++++..++.+. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 367789999998775554 56799999987665533333100 112445678888875444442 23
Q ss_pred CCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeE
Q 017642 151 PQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (368)
Q Consensus 151 ~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (368)
+.|.+||+.+++.+..+.....+.+++|+|++++++ .++.|++||+++++.+..+..+... ..+.|+|++..+
T Consensus 115 -----~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l 188 (337)
T 1pby_B 115 -----TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAV 188 (337)
T ss_dssp -----CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCC
T ss_pred -----ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEE
Confidence 899999999999888888777889999999998666 7899999999999988777644311 133788998864
Q ss_pred EEEeecCCCCe-----------------------EEEEecCcceee--eeeccCcceEEEEECCCCCEEEEEeCCCcEEE
Q 017642 230 VLVCPGLQKGQ-----------------------VRVEHYASKRTK--FIMAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (368)
Q Consensus 230 ~l~~~g~~dg~-----------------------i~i~~~~~~~~~--~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~ 284 (368)
++. +..++. |.+|+....... .+..+...+.+++|+|+|++|+++ ++. |+
T Consensus 189 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~ 263 (337)
T 1pby_B 189 WNQ--HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LE 263 (337)
T ss_dssp CCC--CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EE
T ss_pred eee--ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EE
Confidence 432 333333 456666554332 234566678899999999998888 677 99
Q ss_pred EEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 285 IFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 285 iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
+||+.+++.+..+.. ...+.+++|+|||++|++++.++.|++||+.+++...
T Consensus 264 ~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 264 SFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred EEECCCCcCcceecC---CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 999999998877764 2467899999999999999999999999999886543
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=7.7e-22 Score=169.84 Aligned_cols=239 Identities=8% Similarity=-0.083 Sum_probs=172.7
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecC-CCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcE
Q 017642 80 TSSSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP-FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 80 ~~~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (368)
....|...|.+++|+|+|++|+++.++.|++||+++ .+.. ..+...+...+.++.|++++..++.+..+.. ....|
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l 112 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPE--KVDTGFATICNNDHGISPDGALYAISDKVEF-GKSAI 112 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCE--ECCCTTCCCBCSCCEECTTSSEEEEEECTTT-SSCEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCce--EeccccccccccceEECCCCCEEEEEEeCCC-CcceE
Confidence 344578899999999999999999999999999987 5543 2232122356677889988877666552100 01455
Q ss_pred EEEeCCCCcEEEEEecCCceeEEEEeeCccEEE----eCCcEEEEEcC-CCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 159 MIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFA-DLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 159 ~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
.+|+..+++ ...+.....+..++|+|+++.++ .++.+++|++. .+.....+..+...+..++|+|+++.++++
T Consensus 113 ~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~- 190 (297)
T 2ojh_A 113 YLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFN- 190 (297)
T ss_dssp EEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEE-
T ss_pred EEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEE-
Confidence 566655555 34455455689999999998766 47888898863 223345566677788999999999864443
Q ss_pred ecCCCCeEEEEec--CcceeeeeeccCcceEEEEECCCCCEEEEEeCC-----------CcEEEEEECCCCceeEeeEec
Q 017642 234 PGLQKGQVRVEHY--ASKRTKFIMAHDSRIACFALTQDGQLLATSSTK-----------GTLVRIFNTLDGTLLQEVRRG 300 (368)
Q Consensus 234 ~g~~dg~i~i~~~--~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~d-----------g~~i~iwd~~~~~~~~~~~~~ 300 (368)
+..++.+++|.. .......+..|...+.+++|+|+|++|++++.+ +. |++||+.+++........
T Consensus 191 -~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 191 -SSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp -ECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EEEEETTSCSCEEEEEEE
T ss_pred -ecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EEEEecCCCCceeeeccC
Confidence 445788888665 456667777888889999999999999888765 46 999999888764333321
Q ss_pred cCcccEEEEEEecCCCEEEEEeCCC
Q 017642 301 ADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 301 ~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
.|...+.+++|+|+|++|++++.+.
T Consensus 269 ~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 GGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp ESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCCcccccceECCCCCEEEEEEecc
Confidence 1667899999999999998887553
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=3.1e-22 Score=194.97 Aligned_cols=239 Identities=14% Similarity=0.063 Sum_probs=175.7
Q ss_pred CCCEEEEEEcCCCCEEEEEe--CC-----eEEEEEecCCCcceEEEcccCCc----------------------eeEEEE
Q 017642 85 PPTLLHISFNQDHGCFAAGT--DH-----GFRIYNCDPFREIFRRDFERGGG----------------------IGVVEM 135 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~--d~-----~i~iw~~~~~~~~~~~~~~~~~~----------------------~~~~~~ 135 (368)
...|.+++|+|||++|++++ |+ .|++||+++++........ .+. ..+..+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSK-VVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGG-GTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchh-hcccccccccchhhhhhhhhhhccccCccee
Confidence 45799999999999998887 55 6999999876654332221 121 346788
Q ss_pred EEeCCeEEEEecCCCCCCCCCcEEEEeCCCC---cEEEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEE
Q 017642 136 LFRCNILALVGGGPDPQYPLNKVMIWDDHQS---RCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI 210 (368)
Q Consensus 136 ~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~ 210 (368)
.|++++..++.++. +.|++||+.++ +......+...+..++|+|||+.++ .++.|++||+.+++..+..
T Consensus 115 ~~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp EECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred EECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 99999987777664 79999999988 5443333778899999999999887 6889999999988776544
Q ss_pred eccCCC----------------eeEEEEecCCCeEEEEeecC----------------------------CCC--eEEEE
Q 017642 211 ETIANP----------------KGLCAVSQGVGSLVLVCPGL----------------------------QKG--QVRVE 244 (368)
Q Consensus 211 ~~~~~~----------------v~~~~~~~~~~~~~l~~~g~----------------------------~dg--~i~i~ 244 (368)
..+... +..++|+|||+.++++.... .++ .|.+|
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 433322 36799999999866543110 011 56667
Q ss_pred ecCc-ceeeeee---ccCcceEEEEECCCCCEEEEEeC-----CCcEEEEEECCCCceeEeeEeccCcc---cEEEEEEe
Q 017642 245 HYAS-KRTKFIM---AHDSRIACFALTQDGQLLATSST-----KGTLVRIFNTLDGTLLQEVRRGADRA---EIYSLAFS 312 (368)
Q Consensus 245 ~~~~-~~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~-----dg~~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~s 312 (368)
+... .....+. .|...+..++| |||++|++++. +.. |++||+.+++....+..+ ... .+.+++|+
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHET-SPTWVPLHNSLRFL 345 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCSCCEEC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcC-CCCcCCcCCceEEC
Confidence 7665 4444333 47788999999 99998887654 456 999999999887666652 122 34689999
Q ss_pred cCCCEEEEEeCCCeEEEEEcc
Q 017642 313 SNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 313 p~~~~l~s~s~dg~i~iwd~~ 333 (368)
|||+++++++.||.++||.++
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEEC
T ss_pred CCCeEEEEecCCCccEEEEEc
Confidence 999998899999988888876
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=8.1e-21 Score=168.16 Aligned_cols=238 Identities=14% Similarity=0.087 Sum_probs=178.8
Q ss_pred CCCCEEEEEEcCCCCEEEEEe--------CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeE-EEEecCCCCCCC
Q 017642 84 PPPTLLHISFNQDHGCFAAGT--------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYP 154 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~--------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~ 154 (368)
....+..++|+|+|++|++++ ++.|.+||..+++....... . .....+.+++++. ++++...+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~--~~~~~~~~s~dg~~l~v~~~~~---- 110 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--D--LKPFGATINNTTQTLWFGNTVN---- 110 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--S--SCCCSEEEETTTTEEEEEETTT----
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--C--CCcceEEECCCCCEEEEEecCC----
Confidence 345788999999999888877 33599999887665533322 2 2245667777664 44555555
Q ss_pred CCcEEEEeCCCCcEEEEEec-CC---------ceeEEEEeeCccEEE--e---CCcEEEEEcCCCeEEEEEeccCCCeeE
Q 017642 155 LNKVMIWDDHQSRCIGELSF-RS---------EVRSVKLRRDRIIVV--L---EQKIFVYNFADLKLLHQIETIANPKGL 219 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~~~~-~~---------~v~~~~~~~~~~~l~--~---d~~i~vwd~~~~~~~~~~~~~~~~v~~ 219 (368)
+.|.+||..+++.+..+.. .. .+.+++|+|++..++ . ++.|.+||+++++.+..+..+...+..
T Consensus 111 -~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 111 -SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTG 189 (353)
T ss_dssp -TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCC
T ss_pred -CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccce
Confidence 8999999999999888873 22 278899999988665 2 678999999999998888755556788
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCcc-eeeeeec----cCcceEEEEECCCCCEEEEEeCC-CcEEEEEECCCCce
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFIMA----HDSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTL 293 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~----~~~~i~~v~~sp~g~~l~s~~~d-g~~i~iwd~~~~~~ 293 (368)
++|+++++.++++ ..++.|.+|+.... ....+.. +...+..++|+|+|++|++++.+ +. |.+||+.+++.
T Consensus 190 ~~~s~dg~~l~~~---~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~ 265 (353)
T 3vgz_A 190 LALDSEGKRLYTT---NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNI 265 (353)
T ss_dssp CEEETTTTEEEEE---CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCE
T ss_pred EEECCCCCEEEEE---cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcE
Confidence 9999999975543 35889999776553 3334432 45568899999999977776655 77 99999999998
Q ss_pred eEeeEeccCcccEEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCC
Q 017642 294 LQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNSGS 338 (368)
Q Consensus 294 ~~~~~~~~~~~~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~~~~~~ 338 (368)
+..+..+ . ...++|+|+|+++++++ .++.|.+||+.+++..
T Consensus 266 ~~~~~~~--~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 266 LAKVAAP--E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEECS--S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEcC--C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 8887753 2 25699999999666555 7899999999887654
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=6.2e-21 Score=168.83 Aligned_cols=239 Identities=12% Similarity=0.152 Sum_probs=159.7
Q ss_pred CCCCEEEEEEcCCCCEEEEEe---CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecC-CCCCCCCCcEE
Q 017642 84 PPPTLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPLNKVM 159 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~~~~~~i~ 159 (368)
+...+..++|+|||++++++. ++.|.+|+++.+.......+. .+......+++++++..++.++ .+ +.|.
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~~~~~p~~~a~spdg~~l~~~~~~~-----~~v~ 111 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVV-APGTPPAYVAVDEARQLVYSANYHK-----GTAE 111 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEE-EESCCCSEEEEETTTTEEEEEETTT-----TEEE
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeee-cCCCCCEEEEECCCCCEEEEEeCCC-----CEEE
Confidence 345567799999999444443 356999999766543333322 3444566788888876544443 44 8999
Q ss_pred EEeCC-CCc--EEEEEecC----------CceeEEEEeeCccEEE---eCCcEEEEEcC-CCeEEE--EEecc-CCCeeE
Q 017642 160 IWDDH-QSR--CIGELSFR----------SEVRSVKLRRDRIIVV---LEQKIFVYNFA-DLKLLH--QIETI-ANPKGL 219 (368)
Q Consensus 160 vwd~~-~~~--~~~~~~~~----------~~v~~~~~~~~~~~l~---~d~~i~vwd~~-~~~~~~--~~~~~-~~~v~~ 219 (368)
+|++. ++. .+..+.+. ..+.+++|+|++++++ .++.|++||+. +++... .+... ......
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~ 191 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRH 191 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCce
Confidence 99986 332 33333322 2478899999999555 36789999998 554332 22222 225667
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCc--ce---eeeeeccC------cceEEEEECCCCCEEE-EEeCCCcEEEEEE
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KR---TKFIMAHD------SRIACFALTQDGQLLA-TSSTKGTLVRIFN 287 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~---~~~~~~~~------~~i~~v~~sp~g~~l~-s~~~dg~~i~iwd 287 (368)
++|+|+|+.++++ +..++.+.+|+... .. +..+.... ..+..++|+|||++|+ +...++. |.+||
T Consensus 192 ~~~spdg~~l~v~--~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~ 268 (347)
T 3hfq_A 192 LVFSPDGQYAFLA--GELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFA 268 (347)
T ss_dssp EEECTTSSEEEEE--ETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEE
T ss_pred EEECCCCCEEEEE--eCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEE
Confidence 9999999875543 45678999977653 22 22222222 3588999999999774 5556788 99999
Q ss_pred CCC-C--ceeEeeEeccCcccEEEEEEecCCCEEEEEeC-CCeEEEEEcc
Q 017642 288 TLD-G--TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD-KGTVHVFNLK 333 (368)
Q Consensus 288 ~~~-~--~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~-dg~i~iwd~~ 333 (368)
+.. + +.+..+.. +...+..++|+|||++|++++. ++.|.+|+++
T Consensus 269 ~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 269 VTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp ECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 973 2 34444443 3456889999999998888775 5899999664
No 137
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=8.8e-21 Score=177.40 Aligned_cols=230 Identities=11% Similarity=0.098 Sum_probs=177.2
Q ss_pred EEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC--CCCcE
Q 017642 92 SFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD--HQSRC 168 (368)
Q Consensus 92 ~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~--~~~~~ 168 (368)
+|+|++.+++++. ++.|.+||..+++.. ..+..++. +..+.+++++..+++++.| +.|++||+ .++++
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~--~~i~~g~~--~~~v~~spdg~~l~v~~~d-----~~V~v~D~~~~t~~~ 214 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIV--KVIDTGYA--VHISRMSASGRYLLVIGRD-----ARIDMIDLWAKEPTK 214 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEE--EEEECSTT--EEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEE--EEEecCcc--cceEEECCCCCEEEEECCC-----CeEEEEECcCCCCcE
Confidence 3789998888888 888999998877665 33431333 6788899999888888877 99999999 88999
Q ss_pred EEEEecCCceeEEEEee----CccEEE----eCCcEEEEEcCCCeEEEEEecc-----------CCCeeEEEEecCCCeE
Q 017642 169 IGELSFRSEVRSVKLRR----DRIIVV----LEQKIFVYNFADLKLLHQIETI-----------ANPKGLCAVSQGVGSL 229 (368)
Q Consensus 169 ~~~~~~~~~v~~~~~~~----~~~~l~----~d~~i~vwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~ 229 (368)
+.++.+...+..++|+| ||++++ .++.|.+||..+++++..+..+ ...+..+.+++++..+
T Consensus 215 ~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~ 294 (543)
T 1nir_A 215 VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEF 294 (543)
T ss_dssp EEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEE
T ss_pred EEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEE
Confidence 99998888899999999 998877 4899999999999998888642 2257789999998875
Q ss_pred EEEeecCCCCeEEEEecCcc-eee-eeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCceeEeeEecc--Ccc
Q 017642 230 VLVCPGLQKGQVRVEHYASK-RTK-FIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEVRRGA--DRA 304 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~~-~~~-~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~~~~~~~~~--~~~ 304 (368)
++. ...++.|.+|+.... .+. ....+...+..+.|+|+|++|++++ .++. |.+||+.+++++..+..+. |.+
T Consensus 295 ~vs--~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 295 IVN--VKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEE--ETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCT
T ss_pred EEE--ECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCC
Confidence 543 567899999876542 222 1223556788999999999776554 5778 9999999999988887531 433
Q ss_pred cEEEEEEecC-CCEEEEEe-CCCeEEEEEccC
Q 017642 305 EIYSLAFSSN-AQWLAVSS-DKGTVHVFNLKV 334 (368)
Q Consensus 305 ~v~~l~~sp~-~~~l~s~s-~dg~i~iwd~~~ 334 (368)
....+ ++|+ |.+++++. .|++|.|||+.+
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 33333 4777 56666765 689999999987
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.88 E-value=3.3e-21 Score=182.61 Aligned_cols=233 Identities=8% Similarity=0.003 Sum_probs=165.8
Q ss_pred CCCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCc-eeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 85 PPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGG-IGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
..+|++++|+|||++||.++ |+.++||+++.++. ..+. .+. ..+....|+++ ..+++++.+. .+...++|
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~---~~lt-~~~~~~~~~~~~spd-~~l~~~~~~~--g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET---VKLN-REPINSVLDPHYGVG-RVILVRDVSK--GAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE---EECC-SSCCSEECEECTTCS-EEEEEEECST--TSCCEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc---Eeee-cccccccccccCCCC-eEEEEeccCC--CCcceEEE
Confidence 45799999999999998876 77799999865432 2333 333 57888899998 4444332200 01445554
Q ss_pred eCC---CCcEEEEEecCCceeEEEEeeCccE--EE--eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEee
Q 017642 162 DDH---QSRCIGELSFRSEVRSVKLRRDRII--VV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCP 234 (368)
Q Consensus 162 d~~---~~~~~~~~~~~~~v~~~~~~~~~~~--l~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 234 (368)
.+. .+... .+.....+...+|+|++.. ++ .++.+.+||+.+++.......+. ..++|+|||+.++.+..
T Consensus 94 ~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 94 KVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp EEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEE
T ss_pred EEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEE
Confidence 432 23333 4443444557788888753 33 45667799999887665554332 78999999997543321
Q ss_pred cC-CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCC--cEEEEEECCCCceeEeeEeccCcccEEEEE-
Q 017642 235 GL-QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKG--TLVRIFNTLDGTLLQEVRRGADRAEIYSLA- 310 (368)
Q Consensus 235 g~-~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg--~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~- 310 (368)
.. ..+.|++|+........+..|...+..++|+|||++|+++..++ . |++||+.+++.. .+.. +...+..++
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~~--~~~~~~~~~~ 245 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLEL--PSKDFSSYRP 245 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECCC--SCSHHHHHCC
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-EccC--CCcChhhhhh
Confidence 11 11678888877777778888989999999999999999888888 7 999999988877 5554 555566666
Q ss_pred -------EecCCCEEEEEeCCCeEEEEEc
Q 017642 311 -------FSSNAQWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 311 -------~sp~~~~l~s~s~dg~i~iwd~ 332 (368)
|+|||.++++++.|++++||++
T Consensus 246 ~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 246 TAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp SEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999998899999999999999
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=1e-19 Score=159.70 Aligned_cols=230 Identities=13% Similarity=0.092 Sum_probs=164.8
Q ss_pred EEcCCCCEE-EEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeE-EEEecCCCCCCCCCcEEEEeCCCCcE
Q 017642 92 SFNQDHGCF-AAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSRC 168 (368)
Q Consensus 92 ~~s~~g~~l-~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~~~i~vwd~~~~~~ 168 (368)
.|.+++.++ +++. ++.|++||.++++...... .+.... .+.+++++. +++++..+ +.|.+||+.+++.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~---~~~~~~-~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQIT---LGYDFV-DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPP 74 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE---CCCCEE-EEEECSSSCEEEEEESTT-----CEEEEEECSSSSC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEE---ccCCcc-eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCce
Confidence 466666664 4555 7779999998776654333 233344 888988875 44444444 8999999999987
Q ss_pred -EEEEecCCceeE-EEEeeCccEEE--e-C-C--cEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCe
Q 017642 169 -IGELSFRSEVRS-VKLRRDRIIVV--L-E-Q--KIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (368)
Q Consensus 169 -~~~~~~~~~v~~-~~~~~~~~~l~--~-d-~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~ 240 (368)
...+........ ++|+|++++++ . + + .|++||+++++.+..+..+ .....++|+|+|+.++++. ..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~--~~~~~ 151 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILID--RSSAN 151 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEE--ETTTT
T ss_pred eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEe--cCCCc
Confidence 777774444455 99999999877 2 3 3 8999999999988887654 3457899999998755543 34566
Q ss_pred -EEEEecCcce-e----eeeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCce---eEeeEeccCcccEEEEE
Q 017642 241 -VRVEHYASKR-T----KFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL---LQEVRRGADRAEIYSLA 310 (368)
Q Consensus 241 -i~i~~~~~~~-~----~~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~---~~~~~~~~~~~~v~~l~ 310 (368)
+.+|+..... + .........+..++|+|+|++|++++ .++. |++||+.+++. +..+.. ...+..++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~---~~~~~~~~ 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGT---NNLPGTIV 227 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEEC---SSCCCCEE
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccC---CCCCceEE
Confidence 8887765311 1 11223345689999999999665554 5777 99999999988 766664 35678999
Q ss_pred EecCCCEEEEEe-CCCeEEEEEccCCCC
Q 017642 311 FSSNAQWLAVSS-DKGTVHVFNLKVNSG 337 (368)
Q Consensus 311 ~sp~~~~l~s~s-~dg~i~iwd~~~~~~ 337 (368)
|+|||++|++++ .++.|.+||+.+++.
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 999999776664 578899999988765
No 140
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=5e-20 Score=162.69 Aligned_cols=229 Identities=11% Similarity=0.042 Sum_probs=164.8
Q ss_pred EEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeE-EEEecCCCCCCCCCcEEEEeCCCCc
Q 017642 90 HISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSR 167 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~~~i~vwd~~~~~ 167 (368)
.+++++++++++++. ++.|++||+.+++....... ........+.+++++. ++++...+ +.|.+||+.+++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM--PDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC--SSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec--CCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCc
Confidence 346778888888887 88899999887655433332 2212355677888764 44555555 899999999999
Q ss_pred EEEEEecC-------CceeEEEEeeCccEEE---e------------CCcEEEEEcCCCe---EEEEEeccCCCeeEEEE
Q 017642 168 CIGELSFR-------SEVRSVKLRRDRIIVV---L------------EQKIFVYNFADLK---LLHQIETIANPKGLCAV 222 (368)
Q Consensus 168 ~~~~~~~~-------~~v~~~~~~~~~~~l~---~------------d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~ 222 (368)
.+..+... ..+..++|+|+|++++ . ++.|.+||+.+++ .+..+.. ...+.+++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~ 155 (349)
T 1jmx_B 77 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRA 155 (349)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEE
T ss_pred EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeE
Confidence 88877632 2388999999998877 2 3899999998843 3334433 345778999
Q ss_pred ecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeecc--------------------------------------------
Q 017642 223 SQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAH-------------------------------------------- 257 (368)
Q Consensus 223 ~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~-------------------------------------------- 257 (368)
+++++ +++ . + +.|.+|+... +....+..+
T Consensus 156 s~dg~-l~~-~-~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 229 (349)
T 1jmx_B 156 ADDGS-LYV-A-G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATA 229 (349)
T ss_dssp CTTSC-EEE-E-S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCC
T ss_pred CCCCc-EEE-c-c---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccc
Confidence 99998 443 2 2 3377776543 333332211
Q ss_pred ------------------------CcceEEEEECC-CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEe
Q 017642 258 ------------------------DSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFS 312 (368)
Q Consensus 258 ------------------------~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 312 (368)
...+..++|+| +|++|+++ ++. |.+||+.+++.+..+.. ...+.+++|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~---~~~~~~~~~s 303 (349)
T 1jmx_B 230 DLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANL---DHTYYCVAFD 303 (349)
T ss_dssp EEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEEC---SSCCCEEEEC
T ss_pred ccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcC---CCCccceEEC
Confidence 11355778889 99998888 778 99999999998877764 2357799999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 313 SNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 313 p~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
|+|++|++++.++.|++||+++++..
T Consensus 304 ~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 304 KKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp SSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred CCCCEEEEecCCCeEEEEecccccee
Confidence 99998888888999999999887654
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=3.2e-20 Score=159.68 Aligned_cols=216 Identities=10% Similarity=0.008 Sum_probs=161.9
Q ss_pred CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC-CcEEEEEe-c-CCceeEE
Q 017642 105 DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCIGELS-F-RSEVRSV 181 (368)
Q Consensus 105 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~-~~~~~~~~-~-~~~v~~~ 181 (368)
++.|++||+.+.+.. ... .+...+.++.|++++..++.+.. +.|++||+.+ ++...... + ...+.++
T Consensus 21 ~~~i~~~d~~~~~~~--~~~--~~~~~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMR--VVW--QTPELFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDH 90 (297)
T ss_dssp CEEEEEEETTTTEEE--EEE--EESSCCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCC
T ss_pred ceeEEEEeCCCCcee--eec--cCCcceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccce
Confidence 566999998765544 223 45667889999999888877663 8999999999 87776665 3 4788999
Q ss_pred EEeeCccEEE--e---C--CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEec--Ccceee
Q 017642 182 KLRRDRIIVV--L---E--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY--ASKRTK 252 (368)
Q Consensus 182 ~~~~~~~~l~--~---d--~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~--~~~~~~ 252 (368)
+|+|++++++ . + ..|.+|++.+++ ...+..+ ..+..++|+|+++.++++ +..++.++||.. ......
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~--~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYC--GIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEE--EEETTEEEEEEEETTTCCEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEE--ECCCCceEEEEEECCCCcce
Confidence 9999999888 2 2 345555555554 3444333 347889999999975543 456888888764 445566
Q ss_pred eeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECC-CCceeEeeEeccCcccEEEEEEecCCCEEEEEeCC------
Q 017642 253 FIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTL-DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK------ 324 (368)
Q Consensus 253 ~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~-~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~d------ 324 (368)
.+..+...+.+++|+|+|++|+.++ .++. ++||++. .+..+..+.. +...+..++|+|+|++|++++.+
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCC--CSEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEec--CCcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 6777888999999999999887666 5888 9999986 5555666665 56789999999999999888765
Q ss_pred -----CeEEEEEccCCCC
Q 017642 325 -----GTVHVFNLKVNSG 337 (368)
Q Consensus 325 -----g~i~iwd~~~~~~ 337 (368)
+.|++||+.+++.
T Consensus 244 ~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CSSEEEEEEEEETTSCSC
T ss_pred cccCceEEEEEecCCCCc
Confidence 5699999987754
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=4.5e-19 Score=157.73 Aligned_cols=237 Identities=13% Similarity=0.108 Sum_probs=157.9
Q ss_pred CCCCEEEEEEcCCCCEEEEEeC-----CeEEEEEecCC--CcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 84 PPPTLLHISFNQDHGCFAAGTD-----HGFRIYNCDPF--REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~d-----~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
+...+..++|+|||++|++++. +.|.+|+++.. +........ .+......+++ ....++++...+ +
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~-~~~~~p~~~~~-dg~~l~~~~~~~-----~ 120 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQK-TMGADPCYLTT-NGKNIVTANYSG-----G 120 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEE-CSSSCEEEEEE-CSSEEEEEETTT-----T
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEec-cCCCCcEEEEE-CCCEEEEEECCC-----C
Confidence 5667788999999999988884 46999999864 222222222 33445556666 333344444444 8
Q ss_pred cEEEEeCCCCcEEE----EEec-----------CCceeEEEEeeCccEEE----eCCcEEEEEcCCCe-------EE---
Q 017642 157 KVMIWDDHQSRCIG----ELSF-----------RSEVRSVKLRRDRIIVV----LEQKIFVYNFADLK-------LL--- 207 (368)
Q Consensus 157 ~i~vwd~~~~~~~~----~~~~-----------~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~-------~~--- 207 (368)
.|.+|++.....+. .+.+ ...+.+++|+|+|++++ .++.|++|++.... ..
T Consensus 121 ~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~ 200 (361)
T 3scy_A 121 SITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKG 200 (361)
T ss_dssp EEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEE
T ss_pred EEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecc
Confidence 99999987543221 1111 22357899999998665 37899999986433 11
Q ss_pred --EEE-eccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceee---ee---eccCcceEEEEECCCCCEEEEEeC
Q 017642 208 --HQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTK---FI---MAHDSRIACFALTQDGQLLATSST 278 (368)
Q Consensus 208 --~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~---~~---~~~~~~i~~v~~sp~g~~l~s~~~ 278 (368)
..+ .........++|+|+++.++++ +..++.|.+|+.....+. .+ ..+......++|+|||++|+++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~spdg~~l~v~--~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 201 TPEAFKVAPGSGPRHLIFNSDGKFAYLI--NEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEE--ETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred cccceecCCCCCCeEEEEcCCCCEEEEE--cCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 111 2234456789999999875543 446889999877543332 22 223345789999999998877665
Q ss_pred C--CcEEEEEECC--CCc--eeEeeEeccCcccEEEEEEecCCCEEEEEe-CCCeEEEEEcc
Q 017642 279 K--GTLVRIFNTL--DGT--LLQEVRRGADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLK 333 (368)
Q Consensus 279 d--g~~i~iwd~~--~~~--~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~ 333 (368)
+ +. |.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|+++
T Consensus 279 ~~~~~-i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 279 LKADG-VAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SSSCE-EEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCE-EEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 5 77 9999985 444 3333332 34678999999999888887 67899997765
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=5.3e-20 Score=178.28 Aligned_cols=244 Identities=11% Similarity=0.044 Sum_probs=171.3
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCeEEEEEecC-----CCcceEEEcccCCcee--------------EEEEEEeCCeE
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGTDHGFRIYNCDP-----FREIFRRDFERGGGIG--------------VVEMLFRCNIL 142 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~ 142 (368)
..+...+.+++|+|||++|+++.++.|++|++.+ ++.. .... .+... +..+.|++++.
T Consensus 117 ~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~--~~~~-~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~ 193 (706)
T 2z3z_A 117 FDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI--AVTI-DGTETLVYGQAVHQREFGIEKGTFWSPKGS 193 (706)
T ss_dssp ECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE--ESCS-CCBTTEEESSCCGGGCTTCCCSEEECTTSS
T ss_pred cCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE--Eecc-CCCCCeEcccchhhhhcCCCceEEECCCCC
Confidence 3456678889999999999998899999999987 5433 2121 22221 36788999887
Q ss_pred EEEecCCCC----------------------------CCCCCcEEEEeCCCCcEEEEEe---cCCceeEEEEeeCccEEE
Q 017642 143 ALVGGGPDP----------------------------QYPLNKVMIWDDHQSRCIGELS---FRSEVRSVKLRRDRIIVV 191 (368)
Q Consensus 143 ~~~s~~~d~----------------------------~~~~~~i~vwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~ 191 (368)
.++.++.|. ...+..|++||+.+++...... +...+..++|+|||+.++
T Consensus 194 ~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 273 (706)
T 2z3z_A 194 CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILY 273 (706)
T ss_dssp EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEE
T ss_pred EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEE
Confidence 776654110 0012679999999887655442 556799999999999776
Q ss_pred ---eCC-----cEEEEEcCCCeEEEEEe-c-cCC---CeeEEEEec--CCCeEEEEeecCCCCeEEEEec--Ccceeeee
Q 017642 192 ---LEQ-----KIFVYNFADLKLLHQIE-T-IAN---PKGLCAVSQ--GVGSLVLVCPGLQKGQVRVEHY--ASKRTKFI 254 (368)
Q Consensus 192 ---~d~-----~i~vwd~~~~~~~~~~~-~-~~~---~v~~~~~~~--~~~~~~l~~~g~~dg~i~i~~~--~~~~~~~~ 254 (368)
.++ .|++||+.+++....+. . ... .+..++|+| +|+. +++ +..++.++||.. +++.+..+
T Consensus 274 ~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~--l~~-~~~~g~~~l~~~~~~~~~~~~l 350 (706)
T 2z3z_A 274 VAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQF--IWQ-SRRDGWNHLYLYDTTGRLIRQV 350 (706)
T ss_dssp EEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEE--EEE-ECTTSSCEEEEEETTSCEEEEC
T ss_pred EEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEE--EEE-EccCCccEEEEEECCCCEEEec
Confidence 344 89999999984333332 2 221 235689999 8873 333 557888888654 45667777
Q ss_pred eccCcceEE-EEECCCCCEEEEEeC-CC----cEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCC----
Q 017642 255 MAHDSRIAC-FALTQDGQLLATSST-KG----TLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK---- 324 (368)
Q Consensus 255 ~~~~~~i~~-v~~sp~g~~l~s~~~-dg----~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~d---- 324 (368)
..|...+.. ++|+|+|+.|+.++. ++ . |..||+.+++ ...+. +...+.+++|+|||++|+..+.+
T Consensus 351 ~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~-l~~~d~~~~~-~~~l~---~~~~~~~~~~spdg~~l~~~~~~~~~p 425 (706)
T 2z3z_A 351 TKGEWEVTNFAGFDPKGTRLYFESTEASPLERH-FYCIDIKGGK-TKDLT---PESGMHRTQLSPDGSAIIDIFQSPTVP 425 (706)
T ss_dssp CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBE-EEEEETTCCC-CEESC---CSSSEEEEEECTTSSEEEEEEECSSCS
T ss_pred CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEE-EEEEEcCCCC-ceecc---CCCceEEEEECCCCCEEEEEecCCCCC
Confidence 788878877 799999997765544 44 4 7778877766 33443 45578999999999988776433
Q ss_pred CeEEEEEccCCC
Q 017642 325 GTVHVFNLKVNS 336 (368)
Q Consensus 325 g~i~iwd~~~~~ 336 (368)
+.|++||+.+++
T Consensus 426 ~~i~l~d~~~~~ 437 (706)
T 2z3z_A 426 RKVTVTNIGKGS 437 (706)
T ss_dssp CEEEEEESSSCE
T ss_pred cEEEEEECCCCe
Confidence 569999998765
No 144
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=3.7e-20 Score=180.37 Aligned_cols=234 Identities=10% Similarity=0.037 Sum_probs=171.7
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCC--cceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
.|.+++|+|||++|++++++.|++||+.++. .. ..+. .+...+..+.|+|++..++.+.. +.|++||+.
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~--~~l~-~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~ 180 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAV--RQLT-HGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLA 180 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSC--CBCC-CSSSCEEEEEECTTSSEEEEEET------TEEEEEETT
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceE--EEcc-cCCcccccccCCCCCCEEEEEeC------CcEEEEecC
Confidence 4788999999999999999889999998762 22 2232 45567889999999987777664 789999999
Q ss_pred CCcEEEEEe-cCCc----------------eeEEEEeeCccEEE---eCC------------------------------
Q 017642 165 QSRCIGELS-FRSE----------------VRSVKLRRDRIIVV---LEQ------------------------------ 194 (368)
Q Consensus 165 ~~~~~~~~~-~~~~----------------v~~~~~~~~~~~l~---~d~------------------------------ 194 (368)
+++...... +... +..++|+|||+.++ .|+
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 887665444 2221 47899999999877 344
Q ss_pred ---cEEEEEcCC-CeEEEEEe--ccCCCeeEEEEecCCCeEEEEee--cCCCCeEEEEecCcceee-eeeccCc----ce
Q 017642 195 ---KIFVYNFAD-LKLLHQIE--TIANPKGLCAVSQGVGSLVLVCP--GLQKGQVRVEHYASKRTK-FIMAHDS----RI 261 (368)
Q Consensus 195 ---~i~vwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~--g~~dg~i~i~~~~~~~~~-~~~~~~~----~i 261 (368)
.|++||+.+ ++...... .+...+..++| |||+.+++... +..+..|++|+....... .+..+.. .+
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 339 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLH 339 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcC
Confidence 789999988 77554432 35567888999 99998665542 223567777876654433 3344432 45
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEEECC-CCceeEeeEeccCcccEEEE-EEecCCCEEEE-EeCCC--eEEEEEccC
Q 017642 262 ACFALTQDGQLLATSSTKGTLVRIFNTL-DGTLLQEVRRGADRAEIYSL-AFSSNAQWLAV-SSDKG--TVHVFNLKV 334 (368)
Q Consensus 262 ~~v~~sp~g~~l~s~~~dg~~i~iwd~~-~~~~~~~~~~~~~~~~v~~l-~~sp~~~~l~s-~s~dg--~i~iwd~~~ 334 (368)
..++|+|||+++++++.||. ++||.+. +++ ...+.. +...+..+ .|+|||+.|+. ++.++ .++||++..
T Consensus 340 ~~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 340 NSLRFLDDGSILWSSERTGF-QHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SCCEECTTSCEEEEECTTSS-CEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CceEECCCCeEEEEecCCCc-cEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 68999999999999999998 8888765 445 656665 55678887 59999997754 44555 899999975
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=1.1e-18 Score=154.27 Aligned_cols=226 Identities=11% Similarity=0.073 Sum_probs=167.5
Q ss_pred CCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCC------ceeEEEEEEeCCeEEE-Eec-CCCCCCCC
Q 017642 86 PTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGG------GIGVVEMLFRCNILAL-VGG-GPDPQYPL 155 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~s~-~~d~~~~~ 155 (368)
..+..++|+++|++++++. ++.|.+||.++++........... ......+.+++++..+ ++. +.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~----- 163 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE----- 163 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-----
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-----
Confidence 3467789999999776555 577999999877665443331000 1136778888875433 333 344
Q ss_pred CcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEec----cCCCeeEEEEecCCC
Q 017642 156 NKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIET----IANPKGLCAVSQGVG 227 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~----~~~~v~~~~~~~~~~ 227 (368)
+.|.+||..+++.+..+. +...+.+++|+|++..++ .++.|.+||+.+++.+..+.. +...+..++|+|+++
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 889999999999999888 667799999999998776 578999999999998887764 344566799999999
Q ss_pred eEEEEeecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCceeEeeEeccCccc
Q 017642 228 SLVLVCPGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEVRRGADRAE 305 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 305 (368)
.++++ ...++.|.+|+... +.+..+.... ...++|+|+|+++++++ .++. |.+||+.+++.+..+.. ...
T Consensus 244 ~l~~~--~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~-v~~~d~~~~~~~~~~~~---~~~ 315 (353)
T 3vgz_A 244 RAFIT--DSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGK-VSVIDAKSYKVVKTFDT---PTH 315 (353)
T ss_dssp EEEEE--ESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTE-EEEEETTTTEEEEEEEC---CSE
T ss_pred EEEEE--eCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCe-EEEEECCCCeEEEEEec---CCC
Confidence 76554 34568999987754 4444444332 25699999999665555 6788 99999999998888775 346
Q ss_pred EEEEEEecCCCEEEEEeCC
Q 017642 306 IYSLAFSSNAQWLAVSSDK 324 (368)
Q Consensus 306 v~~l~~sp~~~~l~s~s~d 324 (368)
+.+++|+|||++|+++..+
T Consensus 316 ~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 316 PNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEECTTSCEEEEEEEC
T ss_pred CCeEEEcCCCCEEEEEEcc
Confidence 8999999999977766655
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=4.2e-21 Score=186.47 Aligned_cols=239 Identities=9% Similarity=0.008 Sum_probs=168.3
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCce---eEEEEEEeCCeEEEEecCCCCC----CCCCcEE
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI---GVVEMLFRCNILALVGGGPDPQ----YPLNKVM 159 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~d~~----~~~~~i~ 159 (368)
.+.+++|+|||++++++.|+.|++||+.+++.. ..+. .+.. .+.++.|++++..++.+..+.. ..++.|+
T Consensus 18 ~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~--~~~~-~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYREQKGTVRLWNVETNTST--VLIE-GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCE--EEEC-TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEEeCCCCEEEEECCCCcEE--EEec-cccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 466789999999887755888999999877654 3332 3332 3788999999887776654311 1137899
Q ss_pred EEeCCCCcEEEEEe----cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCe----------------
Q 017642 160 IWDDHQSRCIGELS----FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPK---------------- 217 (368)
Q Consensus 160 vwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v---------------- 217 (368)
+||+.+++. ..+. +...+..++|+|||+.++ .++.|++||+.+++..+....+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 999999876 3343 333488999999998888 68899999999887766554433332
Q ss_pred --eEEEEecCCCeEEEEeecC-------------------------------CCCeEEEEecCcce-eeeeecc------
Q 017642 218 --GLCAVSQGVGSLVLVCPGL-------------------------------QKGQVRVEHYASKR-TKFIMAH------ 257 (368)
Q Consensus 218 --~~~~~~~~~~~~~l~~~g~-------------------------------~dg~i~i~~~~~~~-~~~~~~~------ 257 (368)
..++|+|||+.++++.... .+..|++|+..... ...+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 6799999999765543110 01267778776654 3445443
Q ss_pred CcceEEEEECCCCCEEEEEeCC----CcEEEEEECCCCceeEeeEeccCcccE----EEEEEecCCCEEEE--EeCCC--
Q 017642 258 DSRIACFALTQDGQLLATSSTK----GTLVRIFNTLDGTLLQEVRRGADRAEI----YSLAFSSNAQWLAV--SSDKG-- 325 (368)
Q Consensus 258 ~~~i~~v~~sp~g~~l~s~~~d----g~~i~iwd~~~~~~~~~~~~~~~~~~v----~~l~~sp~~~~l~s--~s~dg-- 325 (368)
...+..++|+|||++|++.... .. |++||+.+++....+... +...+ ..++|+|||+.|+. ...++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 6678999999999988776532 45 999999999877665442 23333 37899999997765 44667
Q ss_pred ----eEEEEE
Q 017642 326 ----TVHVFN 331 (368)
Q Consensus 326 ----~i~iwd 331 (368)
.|++||
T Consensus 332 ~~~~~l~~~d 341 (723)
T 1xfd_A 332 GKFYHITVSS 341 (723)
T ss_dssp SCEEEEEEEC
T ss_pred cceeEEEEEe
Confidence 466676
No 147
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=2.1e-19 Score=160.29 Aligned_cols=240 Identities=11% Similarity=0.110 Sum_probs=162.0
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEec-CCCcceEEEcccCCceeEEEEEEeCCeE--EEEecC-------------C
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCD-PFREIFRRDFERGGGIGVVEMLFRCNIL--ALVGGG-------------P 149 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~-------------~ 149 (368)
..+..++|+|||++|++++.+.|.+|+++ +++........ .+. ....+.+++++. ++++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~-~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHP-IGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEE-CCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEee-cCC-CCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 35778999999999988884499999997 54433221111 111 133467788877 344443 3
Q ss_pred CCCCCCCcEEEEeCC-CCcEEEEEe-----cCCceeEEEEeeCccEEE----eCCcEEEEEcC-CCeEE--EEEec--cC
Q 017642 150 DPQYPLNKVMIWDDH-QSRCIGELS-----FRSEVRSVKLRRDRIIVV----LEQKIFVYNFA-DLKLL--HQIET--IA 214 (368)
Q Consensus 150 d~~~~~~~i~vwd~~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~-~~~~~--~~~~~--~~ 214 (368)
+ +.+.+|++. +++....+. +...+.+++|+|||++++ .++.|++||+. +++.. ..+.. +.
T Consensus 118 ~-----g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 118 A-----GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp C-----CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred C-----ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 4 899999987 466554443 456799999999998766 25789999998 67653 23331 24
Q ss_pred CCeeEEEEecCCCeEEEEeecCCCCeEEEEecC---ccee---e---eee----ccCc------ceEEEE-ECCCCCEEE
Q 017642 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA---SKRT---K---FIM----AHDS------RIACFA-LTQDGQLLA 274 (368)
Q Consensus 215 ~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~---~~~~---~---~~~----~~~~------~i~~v~-~sp~g~~l~ 274 (368)
.....++|+|+|+.++++ +..++.|.+|+.+ ++.. . .+. +|.. .+..++ |+|||++|+
T Consensus 193 ~~p~~~~~spdg~~l~v~--~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYAL--MEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp CCEEEEEECTTSSEEEEE--ETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCEeEECCCCCEEEEE--ECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 567889999999976554 3457889987653 2221 1 121 1222 588999 999999887
Q ss_pred EEeCCC------cEEEEEECC-CCceeEeeE-eccCcccEEEEEEec---CCCEEEEEeC-CCeEEEEEccCC
Q 017642 275 TSSTKG------TLVRIFNTL-DGTLLQEVR-RGADRAEIYSLAFSS---NAQWLAVSSD-KGTVHVFNLKVN 335 (368)
Q Consensus 275 s~~~dg------~~i~iwd~~-~~~~~~~~~-~~~~~~~v~~l~~sp---~~~~l~s~s~-dg~i~iwd~~~~ 335 (368)
+++.+. . |.+|++. +++...... ...+...+..++|+| ||++|++++. ++.|++|+++..
T Consensus 271 v~~~~~~~~~~~~-i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 271 ASSRANKFELQGY-IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEESSTTSCCE-EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EECCCCCCCCCCe-EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 766432 7 9999996 566543211 111334567889999 8999999876 489999999765
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=8.6e-20 Score=176.80 Aligned_cols=235 Identities=11% Similarity=0.104 Sum_probs=164.9
Q ss_pred EEEEEEcCCCCEEEEEeCCeEEEEEecCCCc--ceEEEccc-------------CCceeEEEEEEeCCeEEEEecCCCCC
Q 017642 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFRE--IFRRDFER-------------GGGIGVVEMLFRCNILALVGGGPDPQ 152 (368)
Q Consensus 88 v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~--~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~s~~~d~~ 152 (368)
+..+.|. |..++++.+++| +||+.+++. ........ .....+.++.|+++..++++.+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~~---- 100 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFTQ---- 100 (706)
T ss_dssp CTTCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEET----
T ss_pred CCCCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEEC----
Confidence 4446788 666666664558 999988766 33222100 0014588899999966666543
Q ss_pred CCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCC-----CeEEEEEeccCCC---------
Q 017642 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFAD-----LKLLHQIETIANP--------- 216 (368)
Q Consensus 153 ~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~-----~~~~~~~~~~~~~--------- 216 (368)
+.|++||+.+++......+...+..++|+|||+.++ .++.|++||+.+ ++..+....+...
T Consensus 101 ---~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 ---GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp ---TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred ---CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 899999999987766666778899999999999887 799999999988 7765544333332
Q ss_pred -----eeEEEEecCCCeEEEEee------------------------------cCCCCeEEEEecCcceeeeee---ccC
Q 017642 217 -----KGLCAVSQGVGSLVLVCP------------------------------GLQKGQVRVEHYASKRTKFIM---AHD 258 (368)
Q Consensus 217 -----v~~~~~~~~~~~~~l~~~------------------------------g~~dg~i~i~~~~~~~~~~~~---~~~ 258 (368)
+..+.|+|||+.++++.. ...+..|++|+........+. .|.
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 257 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKE 257 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTT
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCc
Confidence 478999999997554420 013456777887765544433 566
Q ss_pred cceEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCceeEeeEeccCcc---cEEEEEEec--CCCEEEEEeCCCeEE
Q 017642 259 SRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTLLQEVRRGADRA---EIYSLAFSS--NAQWLAVSSDKGTVH 328 (368)
Q Consensus 259 ~~i~~v~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~---~v~~l~~sp--~~~~l~s~s~dg~i~ 328 (368)
..+.+++|+|||++|++++.++ . |++||+.+++....+....+.. .+.+++|+| ||++|++++.|+.++
T Consensus 258 ~~~~~~~~spdg~~l~~~~~~~~~~~~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 258 KFLTNLSWSPDENILYVAEVNRAQNECK-VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp CEEEEEEECTTSSEEEEEEECTTSCEEE-EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred eeEeeEEEECCCCEEEEEEeCCCCCeeE-EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccE
Confidence 7899999999999999887765 6 9999999984444443221222 246789999 999999999999999
Q ss_pred EEEcc
Q 017642 329 VFNLK 333 (368)
Q Consensus 329 iwd~~ 333 (368)
||+++
T Consensus 337 l~~~~ 341 (706)
T 2z3z_A 337 LYLYD 341 (706)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99987
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=9.9e-20 Score=183.62 Aligned_cols=236 Identities=9% Similarity=0.099 Sum_probs=177.7
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
..|...+.++.|+++ .+++++. ++.++||.++...... ..+. .+. .+....|++++..++.+. + +.|++
T Consensus 200 ~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~-~~l~-~~~-~~~~~~~SpDG~~la~~~-~-----~~i~~ 269 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL-RKHT-SFT-DYYPRHLNTDGRRILFSK-G-----GSIYI 269 (1045)
T ss_dssp ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC-EECC-CCC-SSCEEEEEESSSCEEEEE-T-----TEEEE
T ss_pred cCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc-eEec-CCC-CcceeeEcCCCCEEEEEe-C-----CEEEE
Confidence 678999999999988 5555666 6678999887533322 2232 222 233446777766555543 3 89999
Q ss_pred EeCCCCcEEEEEec------------CCceeEEEEe-eCccEEE--eCCcEEEEEcCCCeEEEEEeccCC-CeeEEEEec
Q 017642 161 WDDHQSRCIGELSF------------RSEVRSVKLR-RDRIIVV--LEQKIFVYNFADLKLLHQIETIAN-PKGLCAVSQ 224 (368)
Q Consensus 161 wd~~~~~~~~~~~~------------~~~v~~~~~~-~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~ 224 (368)
||+...+ +..+.. ...+..++|+ |||+.++ .++.|++|++..++... +..+.. .+..++|+
T Consensus 270 ~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~s- 346 (1045)
T 1k32_A 270 FNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPEPLRIRYVRRGGD- 346 (1045)
T ss_dssp ECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSCCSCEEEEEECSS-
T ss_pred ecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccCCCcceEEeeeEc-
Confidence 9985443 334432 3369999999 9998777 68999999998876543 555666 78889999
Q ss_pred CCCeEEEEeecCCCCeEE-EEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCc
Q 017642 225 GVGSLVLVCPGLQKGQVR-VEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR 303 (368)
Q Consensus 225 ~~~~~~l~~~g~~dg~i~-i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~ 303 (368)
+|+.++++. .++.+. +|+........+..|...+..++|+|||++|++++.++. |++||+.+++....+.. |.
T Consensus 347 dg~~l~~~s---~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~--~~ 420 (1045)
T 1k32_A 347 TKVAFIHGT---REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERS--RE 420 (1045)
T ss_dssp SEEEEEEEE---TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--SS
T ss_pred CCCeEEEEE---CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccC--CC
Confidence 887644432 367787 778777666666678888999999999999999999999 99999999988776655 67
Q ss_pred ccEEEEEEecCCCEEEEEeCCC----------eEEEEEccCCC
Q 017642 304 AEIYSLAFSSNAQWLAVSSDKG----------TVHVFNLKVNS 336 (368)
Q Consensus 304 ~~v~~l~~sp~~~~l~s~s~dg----------~i~iwd~~~~~ 336 (368)
+.+.+++|+|||++|++++.++ .|++||+.+++
T Consensus 421 ~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 421 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 7889999999999998887644 89999998765
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=1.2e-19 Score=176.24 Aligned_cols=240 Identities=7% Similarity=-0.019 Sum_probs=162.4
Q ss_pred CEEEEEEcCCCCEEEEEeC----------CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 87 TLLHISFNQDHGCFAAGTD----------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.|.+++|||||++|+++.+ +.+.+||+++++........ .+...+..+.|+|++..++.++. +
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~~~~~~~~SPdG~~la~~~~------~ 134 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPE-VSNAKLQYAGWGPKGQQLIFIFE------N 134 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTT-CCSCCCSBCCBCSSTTCEEEEET------T
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCc-cccccccccEECCCCCEEEEEEC------C
Confidence 4899999999999998873 55889999876642111111 23334667889998877776654 7
Q ss_pred cEEEEeCCCCcEEEEEe-cCCce------------------eEEEEeeCccEEE---eCC--------------------
Q 017642 157 KVMIWDDHQSRCIGELS-FRSEV------------------RSVKLRRDRIIVV---LEQ-------------------- 194 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~-~~~~v------------------~~~~~~~~~~~l~---~d~-------------------- 194 (368)
.|++||+.+++...... +...+ .+++|+|||+.++ .++
T Consensus 135 ~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (723)
T 1xfd_A 135 NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214 (723)
T ss_dssp EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCE
T ss_pred eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcce
Confidence 89999999988766554 33333 7899999999887 232
Q ss_pred --------------cEEEEEcCCCeEEEEEecc------CCCeeEEEEecCCCeEEEEee-cCCCCeEEEEecCcceee-
Q 017642 195 --------------KIFVYNFADLKLLHQIETI------ANPKGLCAVSQGVGSLVLVCP-GLQKGQVRVEHYASKRTK- 252 (368)
Q Consensus 195 --------------~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l~~~-g~~dg~i~i~~~~~~~~~- 252 (368)
.|++||+.+++....+..+ ...+..++|+|||+.++.... +..+..|++|+.......
T Consensus 215 ~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 215 PYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp EEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred eccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 7999999888765566543 456788999999985433221 123456777877654433
Q ss_pred eeec-cCcce----EEEEECCCCCEEEE--EeCCC------cEEEEEE-CCCCc--eeEeeEeccCcccEEE-EEEecCC
Q 017642 253 FIMA-HDSRI----ACFALTQDGQLLAT--SSTKG------TLVRIFN-TLDGT--LLQEVRRGADRAEIYS-LAFSSNA 315 (368)
Q Consensus 253 ~~~~-~~~~i----~~v~~sp~g~~l~s--~~~dg------~~i~iwd-~~~~~--~~~~~~~~~~~~~v~~-l~~sp~~ 315 (368)
.+.. +...+ ..++|+|||+.|+. +..++ . |.+|| ...++ +...+.. +...+.. ++|+|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 295 KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH-ITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE-EEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTT
T ss_pred EEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE-EEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCC
Confidence 3333 33433 37899999996664 45566 4 67777 34444 1445543 2234554 6999999
Q ss_pred CEEEEEeCC---CeEEEEEccCCC
Q 017642 316 QWLAVSSDK---GTVHVFNLKVNS 336 (368)
Q Consensus 316 ~~l~s~s~d---g~i~iwd~~~~~ 336 (368)
+.|+..+.+ +.++||++....
T Consensus 372 ~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 372 NKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp TEEEEEESSSCTTCCEEEEECSST
T ss_pred CEEEEEEcCCCCcceEEEEEeCCC
Confidence 999766554 789999997543
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=4.9e-19 Score=161.18 Aligned_cols=239 Identities=14% Similarity=0.079 Sum_probs=163.6
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCc--------ceEEEcc----cCCceeEEEEEEeCCeEEEE----ecCC
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFRE--------IFRRDFE----RGGGIGVVEMLFRCNILALV----GGGP 149 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~~----s~~~ 149 (368)
..++.+++++++.++++++.++++||+...... ....... ..+...+.+++|++++..++ +++.
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 457889999999999999966799988642110 0011110 13445689999999998888 7887
Q ss_pred CCCCCCCcEEEEeCCCC--------cE---EEEEe-cCCceeEEEEeeC-ccEEE---eCCcEEEEEcCCCeEEEEEecc
Q 017642 150 DPQYPLNKVMIWDDHQS--------RC---IGELS-FRSEVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQIETI 213 (368)
Q Consensus 150 d~~~~~~~i~vwd~~~~--------~~---~~~~~-~~~~v~~~~~~~~-~~~l~---~d~~i~vwd~~~~~~~~~~~~~ 213 (368)
| +.|++||+.++ +. +..+. |...|.+++|+|+ +.+++ .||+|++||+++++.+.....|
T Consensus 117 d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~ 191 (434)
T 2oit_A 117 G-----SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPS 191 (434)
T ss_dssp E-----EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECG
T ss_pred C-----ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCC
Confidence 7 99999998654 22 33344 7899999999998 66666 5999999999998777666778
Q ss_pred CCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeecc-------CcceEEEEECCCCCEEEEE-eCCCc----
Q 017642 214 ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAH-------DSRIACFALTQDGQLLATS-STKGT---- 281 (368)
Q Consensus 214 ~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~-------~~~i~~v~~sp~g~~l~s~-~~dg~---- 281 (368)
...+.+++|+|+|+. +++ |+.||.|++|+..+.....+..| ...|.+++|++++.++++. +.+|.
T Consensus 192 ~~~v~~v~wspdg~~--las-gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 192 TVAVTSVCWSPKGKQ--LAV-GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGCEEEEEECTTSSC--EEE-EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCceeEEEEcCCCCE--EEE-EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 889999999999986 343 66899999999885554444433 3379999999988877543 33321
Q ss_pred -EEEEEECCCCc-----eeEeeEec-----cCcccEEEEEEecCCCEEEEEe-CCCeEEEEEc
Q 017642 282 -LVRIFNTLDGT-----LLQEVRRG-----ADRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNL 332 (368)
Q Consensus 282 -~i~iwd~~~~~-----~~~~~~~~-----~~~~~v~~l~~sp~~~~l~s~s-~dg~i~iwd~ 332 (368)
.+++|++.+.+ ....+... ....+-..+.+-++.+++++++ ..+.|.|+..
T Consensus 269 ~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~ 331 (434)
T 2oit_A 269 PDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILAR 331 (434)
T ss_dssp CEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEE
T ss_pred CceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEe
Confidence 28899998652 11111110 1122223344447777766654 3444665554
No 152
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=4.2e-17 Score=140.12 Aligned_cols=238 Identities=13% Similarity=0.204 Sum_probs=173.4
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcc-----cCCceeEEEEEE-eCCeEEEEecCC-CCCCC
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFE-----RGGGIGVVEMLF-RCNILALVGGGP-DPQYP 154 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~~~~s~~~-d~~~~ 154 (368)
.+-..+.+++++++|+++++.. ++.|.+|+.+ ++.. ..+. ..+......+++ .+++.++++... +
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~--~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~---- 99 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFK--FQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT---- 99 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEE--EEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG----
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEE--EEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC----
Confidence 4556789999999999888776 7789999976 2322 2221 012345678888 466666665532 4
Q ss_pred CCcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEe--ccCCCeeEEEEecCCC
Q 017642 155 LNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVG 227 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~ 227 (368)
+.|++|| .+++.+..+. +...+.++++++++++++ .++.|++||. +++.+..+. .+......++++++++
T Consensus 100 -~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 100 -HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp -CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred -CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 8999999 6777777775 345789999999998777 3678999996 466666664 2334577899999886
Q ss_pred eEEEEeecCCCCeEEEEecCcceeeeeecc--CcceEEEEECCCCCEEEEEeCCC-cEEEEEECCCCceeEeeEeccCcc
Q 017642 228 SLVLVCPGLQKGQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTKG-TLVRIFNTLDGTLLQEVRRGADRA 304 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~--~~~i~~v~~sp~g~~l~s~~~dg-~~i~iwd~~~~~~~~~~~~~~~~~ 304 (368)
++++ ...++.|++|+..++.+..+..+ ...+..|+++++|+++++...++ . |++||. +++.+..+..+....
T Consensus 177 -l~v~--~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~ 251 (286)
T 1q7f_A 177 -IFIS--DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISALESKVKHA 251 (286)
T ss_dssp -EEEE--EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEEEESSCCS
T ss_pred -EEEE--ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEEcccCCCC
Confidence 3433 44578999988887776666543 35789999999999888887775 8 999994 677777776533333
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 305 EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 305 ~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
.+.+++++|+|+++++ +.|++|++|++....
T Consensus 252 ~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp CEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred cceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 5789999999987777 679999999986543
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=4.5e-18 Score=149.64 Aligned_cols=226 Identities=10% Similarity=0.113 Sum_probs=152.3
Q ss_pred CEEEEE-e-CCeEEEEEecC-CCcceEEEcccCCceeEEEEEEeCCeEEEEec-CCCCCCCCCcEEEEeCC--CCc--EE
Q 017642 98 GCFAAG-T-DHGFRIYNCDP-FREIFRRDFERGGGIGVVEMLFRCNILALVGG-GPDPQYPLNKVMIWDDH--QSR--CI 169 (368)
Q Consensus 98 ~~l~~~-~-d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~d~~~~~~~i~vwd~~--~~~--~~ 169 (368)
++++++ . ++.|++|+++. +.......+ .+...+..+.|++++..++.+ ..+ +.|++|++. +++ .+
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~ 77 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV--DVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGALTFA 77 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE--ecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCceeec
Confidence 344444 4 88899999964 222223333 344556678888887644443 333 899999987 554 34
Q ss_pred EEEecCCceeEEEEeeCccEEE----eCCcEEEEEcC---CCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEE
Q 017642 170 GELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFA---DLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (368)
Q Consensus 170 ~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~ 242 (368)
..+.....+..++|+|++.+++ .++.|.+||+. .++.+..+.. ...+..++|+|+++.++++ +..++.|+
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~~~~v~ 154 (343)
T 1ri6_A 78 AESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVP--ALKQDRIC 154 (343)
T ss_dssp EEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEE--EGGGTEEE
T ss_pred cccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEe--cCCCCEEE
Confidence 4555455899999999998765 37889999994 4445555543 3457789999999875543 33688999
Q ss_pred EEecCc-ceee-----eeec-cCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCC--Cce--eEeeEec----cCcccE
Q 017642 243 VEHYAS-KRTK-----FIMA-HDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLD--GTL--LQEVRRG----ADRAEI 306 (368)
Q Consensus 243 i~~~~~-~~~~-----~~~~-~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~--~~~--~~~~~~~----~~~~~v 306 (368)
+|+... ..+. .+.. ....+..++|+|+|++|++++ .++. |++||+.. ++. ...+... .....+
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCc
Confidence 988765 3332 2222 344788999999999776554 7788 99999953 433 2222211 012357
Q ss_pred EEEEEecCCCEEEEE-eCCCeEEEEEccC
Q 017642 307 YSLAFSSNAQWLAVS-SDKGTVHVFNLKV 334 (368)
Q Consensus 307 ~~l~~sp~~~~l~s~-s~dg~i~iwd~~~ 334 (368)
..++|+|+|++|+++ ..++.|++||+..
T Consensus 234 ~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 234 ADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred cceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 789999999987754 4789999999973
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=7.6e-19 Score=154.22 Aligned_cols=224 Identities=9% Similarity=-0.000 Sum_probs=160.3
Q ss_pred CEEEEEe-CCeEEEEEecCCCcceEEEcccCCce-eEEEEEEeCCe-EEEEecCCCCCCCCCcEEEEeCCCCcEEEEEec
Q 017642 98 GCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGI-GVVEMLFRCNI-LALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (368)
Q Consensus 98 ~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~ 174 (368)
++|+++. ++.|++||+.+++......+ .+.. ....+.+++++ .+++++..+ +.|.+||+.+++.+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI--ADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC--TTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc--CCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEeeEEc
Confidence 3677777 88899999887665533332 2211 35677888887 445555555 8999999999998888774
Q ss_pred CC------ceeEEEEeeCccEEE-e--------------CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 175 RS------EVRSVKLRRDRIIVV-L--------------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 175 ~~------~v~~~~~~~~~~~l~-~--------------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
.. .+..++|+|+++.++ . ++.|++||+.+++.+..+.. ...+..++|+|+++.++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe-
Confidence 33 788999999997666 3 48999999999988877764 4456778999999875543
Q ss_pred ecCCCCeEEEEecCcc-eeeeeeccCcceEEEEECCCCCEEEEEeCCCc-----------------------EEEEEECC
Q 017642 234 PGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDGQLLATSSTKGT-----------------------LVRIFNTL 289 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~~-~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~-----------------------~i~iwd~~ 289 (368)
++.|.+|+.... ....+..+.. ...+.|+|+|++|+..+.++. .|.+||+.
T Consensus 153 ----~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 153 ----GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp ----SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred ----CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 578999877654 3334443321 112378999987665554332 16899999
Q ss_pred CCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+++.. .+....+...+.+++|+|||++|+++ ++.|++||+.+++..
T Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 228 TGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI 273 (337)
T ss_dssp TCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred CCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence 98875 43333355678899999999999888 789999999876543
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1.1e-18 Score=175.95 Aligned_cols=241 Identities=11% Similarity=0.017 Sum_probs=182.7
Q ss_pred CCCCEEEEEEc-CCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCce-eEEEEEEeCCeEEEEecCCCCCCCCCcEE-E
Q 017642 84 PPPTLLHISFN-QDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI-GVVEMLFRCNILALVGGGPDPQYPLNKVM-I 160 (368)
Q Consensus 84 h~~~v~~~~~s-~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~d~~~~~~~i~-v 160 (368)
|...+.+++|+ |||++|+++.++.+.+|++...... .+. .+.. .+..+.|+ ++..++.++.+ +.|. +
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~---~~~-~~~~~~~~~~~~s-dg~~l~~~s~~-----~~l~~~ 363 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVL---KVP-EPLRIRYVRRGGD-TKVAFIHGTRE-----GDFLGI 363 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEE---ECS-CCSCEEEEEECSS-SEEEEEEEETT-----EEEEEE
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceE---Ecc-CCCcceEEeeeEc-CCCeEEEEECC-----CceEEE
Confidence 34468999999 9999999998888999998754422 233 4444 78888999 88777766655 7888 9
Q ss_pred EeCCCCcEEEEEecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeec--
Q 017642 161 WDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG-- 235 (368)
Q Consensus 161 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g-- 235 (368)
||+.+++......+...+..++|+|||+.++ .++.|++||+.+++....+..+...+..++|+|||+.++.+...
T Consensus 364 ~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~ 443 (1045)
T 1k32_A 364 YDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 443 (1045)
T ss_dssp EETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECS
T ss_pred EECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCcc
Confidence 9988776544334778899999999999887 47899999999998887777788888999999999975444311
Q ss_pred -----CCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCce-----------------
Q 017642 236 -----LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL----------------- 293 (368)
Q Consensus 236 -----~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~----------------- 293 (368)
..++.|++|+........+..|...+..++|+|||++|++++.++. .++|+......
T Consensus 444 ~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (1045)
T 1k32_A 444 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL-DPSPDRVVLNFSFEVVSKPFVIPLIPGS 522 (1045)
T ss_dssp STTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCC-CCEECSSSSCEECCSCBEEEEEESSTTC
T ss_pred ccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccC-CcCcchhccccccccCceeEEEEeCCCC
Confidence 1235899999887777778888888999999999999999998877 77776543221
Q ss_pred --------------------------eEeeEeccCcccEEEEEEecCCCEEEE-------------EeCCCeEEEEEccC
Q 017642 294 --------------------------LQEVRRGADRAEIYSLAFSSNAQWLAV-------------SSDKGTVHVFNLKV 334 (368)
Q Consensus 294 --------------------------~~~~~~~~~~~~v~~l~~sp~~~~l~s-------------~s~dg~i~iwd~~~ 334 (368)
+..+.. +.+.+..++++|||+++++ ...+..|++||+.+
T Consensus 523 ~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~--~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~ 600 (1045)
T 1k32_A 523 PNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV--DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT 600 (1045)
T ss_dssp CCGGGCCCGGGSCCCCCCCCTTGGGGCEECSC--CCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTT
T ss_pred CCccccCcCccccccccccccCHhHceEEcCC--CCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCC
Confidence 111111 4467889999999987775 12345788888877
Q ss_pred CCC
Q 017642 335 NSG 337 (368)
Q Consensus 335 ~~~ 337 (368)
++.
T Consensus 601 ~~~ 603 (1045)
T 1k32_A 601 RKV 603 (1045)
T ss_dssp CCE
T ss_pred CcE
Confidence 654
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=1.3e-18 Score=164.81 Aligned_cols=226 Identities=8% Similarity=0.073 Sum_probs=167.8
Q ss_pred CCCCEEEEEEcCCCCEEEEEeC----CeEEEEEecC--CCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 84 PPPTLLHISFNQDHGCFAAGTD----HGFRIYNCDP--FREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~d----~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
+...+..++|+|| ++++++.. ...+||.++. ..... .+.......+.++.++++.++++++.. +.
T Consensus 63 ~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l~~~~~~~~~~~s~dg~~~~~~s~~~------~~ 133 (582)
T 3o4h_A 63 PINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ--RLEAVKPMRILSGVDTGEAVVFTGATE------DR 133 (582)
T ss_dssp CCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE--ECTTSCSBEEEEEEECSSCEEEEEECS------SC
T ss_pred cccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc--cccCCCCceeeeeCCCCCeEEEEecCC------CC
Confidence 3368999999999 77766653 3467777755 33332 232233445667888888888888776 45
Q ss_pred EEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eC----CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEE
Q 017642 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LE----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (368)
+.+||+.+++......+.. .+++|+|||++++ .+ +.|++||+.+++.. .+..+...+..++|+|||+.++
T Consensus 134 ~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~ 210 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTA 210 (582)
T ss_dssp EEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEE
T ss_pred ceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEE
Confidence 6699999987766665544 8999999999988 23 67999999888754 5667777889999999999754
Q ss_pred EEeecCCCC--eEEEEecCcceeeeeeccCcceEEEE--------ECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec
Q 017642 231 LVCPGLQKG--QVRVEHYASKRTKFIMAHDSRIACFA--------LTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG 300 (368)
Q Consensus 231 l~~~g~~dg--~i~i~~~~~~~~~~~~~~~~~i~~v~--------~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~ 300 (368)
. +..++ .|++|+..+.....+..|...+..++ |+|||.++++++.++. ++||++ ++.+. .
T Consensus 211 --~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-~~l~~~--g~~~~---~- 280 (582)
T 3o4h_A 211 --G-LETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-SAVFID--GERVE---A- 280 (582)
T ss_dssp --E-EECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-EEEEET--TEEEC---C-
T ss_pred --E-ccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc-EEEEEE--CCeec---c-
Confidence 2 44677 78888877655556667777777777 9999999999999999 999999 66553 1
Q ss_pred cCcccEEEEEEecCCCEEEEEeCCCe---EEEEEcc
Q 017642 301 ADRAEIYSLAFSSNAQWLAVSSDKGT---VHVFNLK 333 (368)
Q Consensus 301 ~~~~~v~~l~~sp~~~~l~s~s~dg~---i~iwd~~ 333 (368)
..+.+.+++|+ +++++++++.+.+ |++||..
T Consensus 281 -~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~ 314 (582)
T 3o4h_A 281 -PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSG 314 (582)
T ss_dssp -CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred -CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCC
Confidence 34578999999 9999988877644 6666654
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=7.5e-20 Score=177.63 Aligned_cols=237 Identities=9% Similarity=0.001 Sum_probs=161.9
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCce---eEEEEEEeCCeEEEEecCC---------CCCCCCCc
Q 017642 90 HISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGI---GVVEMLFRCNILALVGGGP---------DPQYPLNK 157 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~s~~~---------d~~~~~~~ 157 (368)
+++|+|||++++++.|+.|++||+.+++.. ..+. .+.. .+.++.|++++..++.++. + +.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~--~~~~-~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~-----~~ 91 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSY--TILS-NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT-----AT 91 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEE--EEEC-HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE-----EE
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEE--EEEc-cccccccceeeEEECCCCCeEEEEecCceeEEeecc-----eE
Confidence 569999998777666888999999877654 3332 2222 2678899999887766543 4 79
Q ss_pred EEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEE-eccCCC-----------------e
Q 017642 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI-ETIANP-----------------K 217 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~-~~~~~~-----------------v 217 (368)
|++||+.+++.+........+..++|+|||+.++ .++.|++||+.+++..+.. .++... .
T Consensus 92 i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 92 YYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp EEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred EEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9999999987632122346789999999999888 7999999999888765432 122211 1
Q ss_pred eEEEEecCCCeEEEEeecC-------------------------------CCCeEEEEecCccee---------eeeecc
Q 017642 218 GLCAVSQGVGSLVLVCPGL-------------------------------QKGQVRVEHYASKRT---------KFIMAH 257 (368)
Q Consensus 218 ~~~~~~~~~~~~~l~~~g~-------------------------------~dg~i~i~~~~~~~~---------~~~~~~ 257 (368)
..++|+|||+.++++.... ....|++|+...... ..+..|
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 4799999999755543110 011666787766543 123457
Q ss_pred CcceEEEEECCCCCEEEEEeCC----CcEEEEEE----CCCCceeEeeE---eccCcccEE-----EEEEecCCCEEEE-
Q 017642 258 DSRIACFALTQDGQLLATSSTK----GTLVRIFN----TLDGTLLQEVR---RGADRAEIY-----SLAFSSNAQWLAV- 320 (368)
Q Consensus 258 ~~~i~~v~~sp~g~~l~s~~~d----g~~i~iwd----~~~~~~~~~~~---~~~~~~~v~-----~l~~sp~~~~l~s- 320 (368)
...+..++|+||++++++.... .. |.+|| +.+++....+. .. |.+.+. .+.|+|||+.|+.
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~-l~~~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSV-LSICDFREDWQTWDCPKTQEHIEES-RTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEE-EEEEEECSSSSSEECCGGGEEEEEC-SSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEE-EEEEcccCCCCCCceEEEEeccccc-CCceEccccCCccEECCCCCeEEEE
Confidence 8889999999998877764322 24 88899 87777665552 21 455565 7899999996554
Q ss_pred -EeCCC--eEEEEEccCCC
Q 017642 321 -SSDKG--TVHVFNLKVNS 336 (368)
Q Consensus 321 -~s~dg--~i~iwd~~~~~ 336 (368)
...+| .|++||+.+++
T Consensus 330 ~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp EECTTSCEEEEEESSCSTT
T ss_pred EEccCCceEEEEEECCCCc
Confidence 44555 56777776554
No 158
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=8.7e-19 Score=159.55 Aligned_cols=195 Identities=11% Similarity=0.119 Sum_probs=140.9
Q ss_pred EEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC-----------Cc-----EEEEEecCCceeEEEEeeCccEEE----
Q 017642 132 VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ-----------SR-----CIGELSFRSEVRSVKLRRDRIIVV---- 191 (368)
Q Consensus 132 ~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~-----------~~-----~~~~~~~~~~v~~~~~~~~~~~l~---- 191 (368)
+..++++++...++.++.+ + +++|+... .. ....+.+...|.+++|++++.+++
T Consensus 39 ~n~lavs~~~~~l~~~~~d-----g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGAS-----G-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CBCEEEETTTTEEEEEETT-----E-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred ccEEEEecCCCEEEEECCC-----E-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 3455566655555555554 4 88876421 01 112344667899999999999887
Q ss_pred e---CCcEEEEEcCCC--------e---EEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc-eeeeeec
Q 017642 192 L---EQKIFVYNFADL--------K---LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFIMA 256 (368)
Q Consensus 192 ~---d~~i~vwd~~~~--------~---~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~ 256 (368)
. |+.|++||++++ + .+..+.+|...|.+++|+|+...+ +++ ++.||.|++|+.... .......
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~-las-~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM-VAV-CLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTE-EEE-EETTSCEEEEEESSSEEEEEEEC
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCE-EEE-EECCCeEEEEEcCCCcceeeccC
Confidence 2 889999998654 2 234556688999999999984442 333 668999999987654 3344567
Q ss_pred cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc-----CcccEEEEEEecCCCEEEEE-eCCC-----
Q 017642 257 HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----DRAEIYSLAFSSNAQWLAVS-SDKG----- 325 (368)
Q Consensus 257 ~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----~~~~v~~l~~sp~~~~l~s~-s~dg----- 325 (368)
|...|.+++|+|+|++|++|+.||. |++||++ ++....+..+. |...|.+++|++++.++++. +.||
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~-v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGT-VVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSC-EEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCc-EEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 8899999999999999999999999 9999998 66555554321 23479999999998887654 3443
Q ss_pred -eEEEEEccCCC
Q 017642 326 -TVHVFNLKVNS 336 (368)
Q Consensus 326 -~i~iwd~~~~~ 336 (368)
.+++|++.+.+
T Consensus 269 ~~v~i~~l~~~~ 280 (434)
T 2oit_A 269 PDVVMALLPKKE 280 (434)
T ss_dssp CEEEEEECCCTT
T ss_pred CceEEEEeccCC
Confidence 38999998654
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.80 E-value=7.8e-19 Score=170.89 Aligned_cols=247 Identities=11% Similarity=0.035 Sum_probs=163.6
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCc-----eeEEEEEEeCCeEEEEecCCCCC-C---CCC
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGG-----IGVVEMLFRCNILALVGGGPDPQ-Y---PLN 156 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~s~~~d~~-~---~~~ 156 (368)
....+++|+|||++|+++ |+.|++||+.+++.... +. .+. .....+.|+|++..++....+.. + ..+
T Consensus 17 ~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVF--LE-NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEE--EC-TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECCCCcEEEEc-CCcEEEEECCCCceEEE--Ee-chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 345678999999999887 88999999988775432 32 222 12234778888877666554200 0 014
Q ss_pred cEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEE-eccCC-----------------C
Q 017642 157 KVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI-ETIAN-----------------P 216 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~-~~~~~-----------------~ 216 (368)
.+.+||+.+++......+...+...+|+|||+.++ .++.|++||+.+++..+.. .++.. .
T Consensus 93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 67799999988654333778899999999999888 7999999999887754321 12211 1
Q ss_pred eeEEEEecCCCeEEEEee-------------------------------cCCCC--eEEEEecCc---c---eeeeee--
Q 017642 217 KGLCAVSQGVGSLVLVCP-------------------------------GLQKG--QVRVEHYAS---K---RTKFIM-- 255 (368)
Q Consensus 217 v~~~~~~~~~~~~~l~~~-------------------------------g~~dg--~i~i~~~~~---~---~~~~~~-- 255 (368)
...+.|+|||+.++++.. |..+. .|++|+..+ . ....+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 234889999997655421 01111 456677766 4 333443
Q ss_pred ----ccCcceEEEEECCCCCEEEEEeC----CCcEEEEEECCCCc----ee--EeeEeccCcccEE-----EEEEecCCC
Q 017642 256 ----AHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDGT----LL--QEVRRGADRAEIY-----SLAFSSNAQ 316 (368)
Q Consensus 256 ----~~~~~i~~v~~sp~g~~l~s~~~----dg~~i~iwd~~~~~----~~--~~~~~~~~~~~v~-----~l~~sp~~~ 316 (368)
+|...+..++|+|||++++.... +.. |++||+.+++ +. ..+....+...|. .+.|+|||+
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC
Confidence 37778999999999996665432 236 9999999887 22 2221111444443 788999999
Q ss_pred EEE-EEe-CCC--eEEEEEccCCCC
Q 017642 317 WLA-VSS-DKG--TVHVFNLKVNSG 337 (368)
Q Consensus 317 ~l~-s~s-~dg--~i~iwd~~~~~~ 337 (368)
.|+ ..+ .+| .|++||+..++.
T Consensus 332 ~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 332 SFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EEEEEEECTTSCEEEEEEETTCSSC
T ss_pred EEEEEEEcCCCceEEEEEECCCCce
Confidence 877 665 344 588888876543
No 160
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.79 E-value=1.5e-16 Score=139.55 Aligned_cols=240 Identities=10% Similarity=0.064 Sum_probs=173.9
Q ss_pred CCCEEEEEEcCCCCEEEEEeCC-------------------------eEEEEEecCCCcceEEEcccCCceeEEEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGTDH-------------------------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC 139 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~-------------------------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (368)
-+.+.+|+++++|+++++...+ .|.+||.++++.. ..+...+-.....+++++
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccCCCccCCceEEEECC
Confidence 4579999999999999887733 5899987665543 333223334677888998
Q ss_pred CeEEEEecCCCCCCCCCcEEEEeCCCCc-EEEEEe----------cCCceeEEEEee-CccEEEe----CCcEEEEEcCC
Q 017642 140 NILALVGGGPDPQYPLNKVMIWDDHQSR-CIGELS----------FRSEVRSVKLRR-DRIIVVL----EQKIFVYNFAD 203 (368)
Q Consensus 140 ~~~~~~s~~~d~~~~~~~i~vwd~~~~~-~~~~~~----------~~~~v~~~~~~~-~~~~l~~----d~~i~vwd~~~ 203 (368)
++.++++...+ +.|++||..... .+..+. +-.....+++++ ++.+++. ++.|++|| .+
T Consensus 101 ~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 101 DGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp TSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 88777777665 899999975442 455552 223688999999 7877772 56899999 57
Q ss_pred CeEEEEEeccC----------CCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeee--ccCcceEEEEECCCC
Q 017642 204 LKLLHQIETIA----------NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIM--AHDSRIACFALTQDG 270 (368)
Q Consensus 204 ~~~~~~~~~~~----------~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~--~~~~~i~~v~~sp~g 270 (368)
++.+..+.... .....+++++++..++++ ...++.|++|+.. ++.+..+. .+...+..++|+| +
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~--d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA--DRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE--ETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE--ECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 77777764322 236779999996665554 4568899998887 77666663 4566788999999 4
Q ss_pred CEEEE-------EeCCCcEEEEEECCCCceeEeeEec-cCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 271 QLLAT-------SSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 271 ~~l~s-------~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
..+++ ...+.. |++||+.+++.+..+... .+...+.+|+++|+|.++++...++.|++|+++...
T Consensus 252 ~~~~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred EEEEeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 33333 333457 999999999988877421 145578999999999888888889999999997643
No 161
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.79 E-value=1.2e-16 Score=141.22 Aligned_cols=220 Identities=11% Similarity=0.103 Sum_probs=144.2
Q ss_pred CCeEEEEEecCCCcceEE-EcccCCceeEEEEEEeCCeEEEEecC--CCCCCCCCcEEEEeCCCCc--EEEEEe-cCCce
Q 017642 105 DHGFRIYNCDPFREIFRR-DFERGGGIGVVEMLFRCNILALVGGG--PDPQYPLNKVMIWDDHQSR--CIGELS-FRSEV 178 (368)
Q Consensus 105 d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~--~d~~~~~~~i~vwd~~~~~--~~~~~~-~~~~v 178 (368)
+++|.+|+++........ ... .+......+++++++.+++++. .+ +.|++||+.+++ .+..+. +...+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~-~~~~~p~~~a~spdg~l~~~~~~~~~-----~~v~~~~~~~g~~~~~~~~~~~~~~p 88 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLL-AATQNPTYLALSAKDCLYSVDKEDDE-----GGIAAWQIDGQTAHKLNTVVAPGTPP 88 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE-EECSCCCCEEECTTCEEEEEEEETTE-----EEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred CCCEEEEEEcCCCCeEEEeeee-eccCCcceEEEccCCeEEEEEecCCC-----ceEEEEEecCCcEEEeeeeecCCCCC
Confidence 456889988764433222 111 2334456688888887444432 24 799999997775 334433 67889
Q ss_pred eEEEEeeCccEEE----eCCcEEEEEcC-CC--eEEEEEecc---------CCCeeEEEEecCCCeEEEEeecCCCCeEE
Q 017642 179 RSVKLRRDRIIVV----LEQKIFVYNFA-DL--KLLHQIETI---------ANPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (368)
Q Consensus 179 ~~~~~~~~~~~l~----~d~~i~vwd~~-~~--~~~~~~~~~---------~~~v~~~~~~~~~~~~~l~~~g~~dg~i~ 242 (368)
..++|+|++++++ .++.|.+||+. ++ +.+..+... ...+..++|+|+++ +++ + +..++.|+
T Consensus 89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v-~-~~~~~~v~ 165 (347)
T 3hfq_A 89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAV-I-DLGSDKVY 165 (347)
T ss_dssp SEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEE-E-ETTTTEEE
T ss_pred EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEE-E-eCCCCEEE
Confidence 9999999998776 36899999995 33 333333221 12367799999998 443 3 45678999
Q ss_pred EEecC-cceeee---eec-cCcceEEEEECCCCCEEEEE-eCCCcEEEEEECCC--Cce--eEeeEeccC----cccEEE
Q 017642 243 VEHYA-SKRTKF---IMA-HDSRIACFALTQDGQLLATS-STKGTLVRIFNTLD--GTL--LQEVRRGAD----RAEIYS 308 (368)
Q Consensus 243 i~~~~-~~~~~~---~~~-~~~~i~~v~~sp~g~~l~s~-~~dg~~i~iwd~~~--~~~--~~~~~~~~~----~~~v~~ 308 (368)
+|+.. ...+.. +.. ....+..++|+|||++|+++ ..++. |++|++.. ++. +..+..... ...+..
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 244 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ-IASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAA 244 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEE
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCceEEeeeeeecCCCCCCCCccee
Confidence 98876 222221 222 23367889999999966664 55677 99999874 443 222222111 135889
Q ss_pred EEEecCCCEEE-EEeCCCeEEEEEccC
Q 017642 309 LAFSSNAQWLA-VSSDKGTVHVFNLKV 334 (368)
Q Consensus 309 l~~sp~~~~l~-s~s~dg~i~iwd~~~ 334 (368)
++|+|||++|+ +...++.|.+|++..
T Consensus 245 i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 245 IRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 99999999874 555689999999973
No 162
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.79 E-value=1.1e-17 Score=150.02 Aligned_cols=246 Identities=13% Similarity=0.001 Sum_probs=160.5
Q ss_pred cCCCCCEEE-----EEEcCCCCEEEEEeC-Ce---EEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCC
Q 017642 82 SSPPPTLLH-----ISFNQDHGCFAAGTD-HG---FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ 152 (368)
Q Consensus 82 ~~h~~~v~~-----~~~s~~g~~l~~~~d-~~---i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~ 152 (368)
+.|...... .+|+|||++|+.+++ ++ |.+||+++++.. .... .+...+....|++++..++....+
T Consensus 27 t~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--~lt~-~~~~~~~~~~~spdg~~l~~~~~~-- 101 (388)
T 3pe7_A 27 TPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--QLTE-GRGDNTFGGFLSPDDDALFYVKDG-- 101 (388)
T ss_dssp SCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--ECCC-SSCBCSSSCEECTTSSEEEEEETT--
T ss_pred cCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--Eeee-CCCCCccceEEcCCCCEEEEEeCC--
Confidence 344444444 789999999988873 44 777777654433 2232 343333356789988777766655
Q ss_pred CCCCcEEEEeCCCCcEEEEEe-cCCceeEEE--EeeCccEEE-------------------------eCCcEEEEEcCCC
Q 017642 153 YPLNKVMIWDDHQSRCIGELS-FRSEVRSVK--LRRDRIIVV-------------------------LEQKIFVYNFADL 204 (368)
Q Consensus 153 ~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~--~~~~~~~l~-------------------------~d~~i~vwd~~~~ 204 (368)
+.|++||+.+++....+. +...+.... +++++..++ .+..|++||+.++
T Consensus 102 ---~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 102 ---RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp ---TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred ---CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 799999999998877766 444443333 478888876 1257999999988
Q ss_pred eEEEEEeccCCCeeEEEEec-CCCeEEEEeecCC---CCeEEEEecCcceeeeeeccC--cceEEEEECCCCCEEEEEeC
Q 017642 205 KLLHQIETIANPKGLCAVSQ-GVGSLVLVCPGLQ---KGQVRVEHYASKRTKFIMAHD--SRIACFALTQDGQLLATSST 278 (368)
Q Consensus 205 ~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~g~~---dg~i~i~~~~~~~~~~~~~~~--~~i~~v~~sp~g~~l~s~~~ 278 (368)
+..... .+...+..+.|+| +|+.++++..+.. ...|.+++..+.....+..+. ..+..++|+|||+.|+..+.
T Consensus 179 ~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (388)
T 3pe7_A 179 ESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSY 257 (388)
T ss_dssp CEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEec
Confidence 754443 4566788899999 9987655542211 336666666666666665554 35788999999997765443
Q ss_pred -C----CcEEEEEECCCCceeEeeEeccCccc---EEEEEEecCCCEEEEE---------eCCCeEEEEEccCCCC
Q 017642 279 -K----GTLVRIFNTLDGTLLQEVRRGADRAE---IYSLAFSSNAQWLAVS---------SDKGTVHVFNLKVNSG 337 (368)
Q Consensus 279 -d----g~~i~iwd~~~~~~~~~~~~~~~~~~---v~~l~~sp~~~~l~s~---------s~dg~i~iwd~~~~~~ 337 (368)
+ +. |++||+.+++.........+... ...+.|+|||+.|+.. ..+..|++||+.+++.
T Consensus 258 ~~~~~~~~-l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 258 LKGSPDRF-IYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp ETTCCCEE-EEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred CCCCCcce-EEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 2 24 99999998875432221100000 1123799999988754 4566899999987653
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=8.8e-17 Score=144.19 Aligned_cols=244 Identities=12% Similarity=0.071 Sum_probs=159.3
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEe-------------
Q 017642 81 SSSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVG------------- 146 (368)
Q Consensus 81 ~~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s------------- 146 (368)
...|...+..+.|+|||+.|+.+. ++.|++||+.+++........ ........+.+++++..++.
T Consensus 76 t~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~ 154 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP-AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTD 154 (388)
T ss_dssp CCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC-TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS
T ss_pred eeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech-hhcccccceeECCCCCeeccccccCcccccccc
Confidence 334444555678999999999988 667999999887765443332 22222234455777766653
Q ss_pred ---------cCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEee-CccEEE--e-------CCcEEEEEcCCCeEE
Q 017642 147 ---------GGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DRIIVV--L-------EQKIFVYNFADLKLL 207 (368)
Q Consensus 147 ---------~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~--~-------d~~i~vwd~~~~~~~ 207 (368)
...+ ..|++||+.+++......+...+..++|+| |++.++ . ...|.++|+..++.
T Consensus 155 ~~~~~~~~~~~~~-----~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~- 228 (388)
T 3pe7_A 155 WKKFHEFYFTKPC-----CRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM- 228 (388)
T ss_dssp HHHHHHHGGGCCC-----EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-
T ss_pred cchhhhhhccCCc-----ceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-
Confidence 1222 689999999998766666888899999999 998876 2 23788888765543
Q ss_pred EEEeccC--CCeeEEEEecCCCeEEEEeecCC--CCeEEEEecCcceeeeeeccCc---c---eEEEEECCCCCEEEEE-
Q 017642 208 HQIETIA--NPKGLCAVSQGVGSLVLVCPGLQ--KGQVRVEHYASKRTKFIMAHDS---R---IACFALTQDGQLLATS- 276 (368)
Q Consensus 208 ~~~~~~~--~~v~~~~~~~~~~~~~l~~~g~~--dg~i~i~~~~~~~~~~~~~~~~---~---i~~v~~sp~g~~l~s~- 276 (368)
..+..+. ..+....|+|||+.++++..... +..|++|+........+..... . ...+.|+|||+.|+..
T Consensus 229 ~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 308 (388)
T 3pe7_A 229 RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDV 308 (388)
T ss_dssp EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC----
T ss_pred EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEe
Confidence 3443333 24667899999998655442211 1238888877654433322211 0 1123699999977754
Q ss_pred --------eCCCcEEEEEECCCCceeEeeEeccCcc-----------cEEEEEEecCCCEEEEEe-CCCeEEEEEccCC
Q 017642 277 --------STKGTLVRIFNTLDGTLLQEVRRGADRA-----------EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVN 335 (368)
Q Consensus 277 --------~~dg~~i~iwd~~~~~~~~~~~~~~~~~-----------~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~~~ 335 (368)
..+.. |++||+.+++.. .+.. +.. .+.+++|+|||+.|+..+ .+|...||.++-.
T Consensus 309 ~~~~~~~~~~~~~-i~~~d~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 309 QDDSGYKIENDPF-LYVFNMKNGTQH-RVAR--HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp --------CCCCE-EEEEETTTTEEE-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred eeccccccCCCCE-EEEEeccCCceE-Eecc--ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 34556 999999887654 4544 333 478899999999887665 5677777766543
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=1.7e-16 Score=140.01 Aligned_cols=205 Identities=10% Similarity=0.058 Sum_probs=142.9
Q ss_pred CEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCC----ceeEEEEEEeCCeEEEEecCCC-----CCC--
Q 017642 87 TLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGGPD-----PQY-- 153 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~~d-----~~~-- 153 (368)
.+..++|+|+|++++++. ++.|.+||+.+++......+. .. ...+..+.+++++..++.+..+ ..|
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS-SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC-CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc-cccccccccccceEECCCCCEEEEEccccccccccccc
Confidence 467899999999765544 667999998876655333331 11 2335677888887655544410 000
Q ss_pred CCCcEEEEeCCCCc---EEEEEecCCceeEEEEeeCccEEEeCCcEEEEEcCCCeEEEEEeccC----------------
Q 017642 154 PLNKVMIWDDHQSR---CIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQIETIA---------------- 214 (368)
Q Consensus 154 ~~~~i~vwd~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~d~~i~vwd~~~~~~~~~~~~~~---------------- 214 (368)
.++.|.+||+.+++ .+..+.+...+.+++|+|++++++.++.|++||+.+++.+..+....
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWP 202 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCC
T ss_pred CCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceeeec
Confidence 01789999998854 34455566679999999999955577789999999988777664321
Q ss_pred ----------------------------------------------------CCeeEEEEec-CCCeEEEEeecCCCCeE
Q 017642 215 ----------------------------------------------------NPKGLCAVSQ-GVGSLVLVCPGLQKGQV 241 (368)
Q Consensus 215 ----------------------------------------------------~~v~~~~~~~-~~~~~~l~~~g~~dg~i 241 (368)
.....++++| +++.++++ ++.|
T Consensus 203 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v 277 (349)
T 1jmx_B 203 HQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRL 277 (349)
T ss_dssp CCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEE
T ss_pred CCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeE
Confidence 0223456678 88764432 6789
Q ss_pred EEEecCccee-eeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 242 RVEHYASKRT-KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 242 ~i~~~~~~~~-~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
.+|+...... ..+. ....+.+++|+|+|++|++++.++. |++||+.+++.+..+..
T Consensus 278 ~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~-v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 278 AKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFND-LAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSE-EEEEETTTTEEEEEEEC
T ss_pred EEEECccCeEEEEEc-CCCCccceEECCCCCEEEEecCCCe-EEEEeccccceeeeeec
Confidence 9988765443 3443 3445789999999998888888888 99999999998888765
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=8.2e-17 Score=144.61 Aligned_cols=234 Identities=10% Similarity=-0.047 Sum_probs=153.7
Q ss_pred CEEEEEEcCCCCEEEEEeC--C--eEEEEEecCCCcceEEEcccCCceeEE-EEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 87 TLLHISFNQDHGCFAAGTD--H--GFRIYNCDPFREIFRRDFERGGGIGVV-EMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d--~--~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
.+..++|+|||++|+...+ + .|.+|++..++.. .+. .+..... ...|++++..++....+ +.|++|
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---~l~-~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~ 107 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---QLT-EGKGDNTFGGFISTDERAFFYVKNE-----LNLMKV 107 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---ECC-CSSCBCTTTCEECTTSSEEEEEETT-----TEEEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---Eee-cCCCCccccceECCCCCEEEEEEcC-----CcEEEE
Confidence 3566789999999887762 2 4777887654432 222 2222222 26688888777665555 789999
Q ss_pred eCCCCcEEEEEe-cCCceeE-------------------EEEeeCccEEE--------eCCcEEEEEcCCCeEEEEEecc
Q 017642 162 DDHQSRCIGELS-FRSEVRS-------------------VKLRRDRIIVV--------LEQKIFVYNFADLKLLHQIETI 213 (368)
Q Consensus 162 d~~~~~~~~~~~-~~~~v~~-------------------~~~~~~~~~l~--------~d~~i~vwd~~~~~~~~~~~~~ 213 (368)
|+.+++...... +...... +.++|++..++ .+..|++||+.+++..... .+
T Consensus 108 d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~ 186 (396)
T 3c5m_A 108 DLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QD 186 (396)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EE
T ss_pred ECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cC
Confidence 999888766655 3332222 24566665544 1347999999888765544 45
Q ss_pred CCCeeEEEEec-CCCeEEEEeecCCC----CeEEEEecCcceeeeeecc--CcceEEEEECCCCCEEEEEeCC-----Cc
Q 017642 214 ANPKGLCAVSQ-GVGSLVLVCPGLQK----GQVRVEHYASKRTKFIMAH--DSRIACFALTQDGQLLATSSTK-----GT 281 (368)
Q Consensus 214 ~~~v~~~~~~~-~~~~~~l~~~g~~d----g~i~i~~~~~~~~~~~~~~--~~~i~~v~~sp~g~~l~s~~~d-----g~ 281 (368)
...+..+.|+| +++.++++. .... ..|.+++..+.....+..+ ...+..++|+|||++|+.++.+ +.
T Consensus 187 ~~~~~~~~~sp~dg~~l~~~~-~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 265 (396)
T 3c5m_A 187 TAWLGHPIYRPFDDSTVGFCH-EGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRV 265 (396)
T ss_dssp SSCEEEEEEETTEEEEEEEEE-CSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEE
T ss_pred CcccccceECCCCCCEEEEEe-cCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccce
Confidence 66788899999 777655544 2222 4577777666554444443 2357889999999987776544 45
Q ss_pred EEEEEECCCCceeEeeEeccCcccEEEEEEec-CCCEEEEEe----------------CCCeEEEEEccCCCC
Q 017642 282 LVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS-NAQWLAVSS----------------DKGTVHVFNLKVNSG 337 (368)
Q Consensus 282 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp-~~~~l~s~s----------------~dg~i~iwd~~~~~~ 337 (368)
|++||+.+++....... .. .. +.|+| ||+++++++ .++.|++||+.+++.
T Consensus 266 -l~~~d~~~g~~~~l~~~---~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 266 -IYKANPETLENEEVMVM---PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp -EEEECTTTCCEEEEEEC---CS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred -EEEEECCCCCeEEeeeC---CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 99999988876533222 11 23 89999 999888754 347899999987654
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.72 E-value=2.2e-15 Score=133.80 Aligned_cols=231 Identities=14% Similarity=0.094 Sum_probs=144.1
Q ss_pred CCCEEEEEe-----CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC--CcE
Q 017642 96 DHGCFAAGT-----DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ--SRC 168 (368)
Q Consensus 96 ~g~~l~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~--~~~ 168 (368)
...++++|+ +++|.+|.++........... .+......+++++++..+++++.+. -.++.|.+|++.. ++.
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~-~~~~~p~~l~~spdg~~l~~~~~~~-~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSD-AEVANPSYLIPSADGKFVYSVNEFS-KDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEE-EECSCCCSEEECTTSSEEEEEECCS-STTCEEEEEEEETTTTEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeec-ccCCCCceEEECCCCCEEEEEEccC-CCCCcEEEEEEeCCCCcE
Confidence 344555664 456999988654333222211 1334445577888876555444310 0127899998765 433
Q ss_pred --EEEEe-cCCceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEE----Ee--c--------cCCCeeEEEEecCCC
Q 017642 169 --IGELS-FRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQ----IE--T--------IANPKGLCAVSQGVG 227 (368)
Q Consensus 169 --~~~~~-~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~----~~--~--------~~~~v~~~~~~~~~~ 227 (368)
+.... +......+++ ++++++ .++.|.+|++.....+.. +. + +...+..++|+|+++
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 23333 4556777777 666555 378999999975332211 11 1 011236799999999
Q ss_pred eEEEEeecCCCCeEEEEecCcce-------e-------eeeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCc
Q 017642 228 SLVLVCPGLQKGQVRVEHYASKR-------T-------KFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGT 292 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~~~~-------~-------~~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~ 292 (368)
.++++ +..++.|.+|+..... + .....+...+..++|+|||++|++++ .++. |.+||+.+++
T Consensus 168 ~l~~~--~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~g~ 244 (361)
T 3scy_A 168 YLLAD--DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYADGM 244 (361)
T ss_dssp EEEEE--ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEETTE
T ss_pred EEEEE--eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecCCc
Confidence 75543 4457889998665322 1 11223445678999999999887777 5777 9999998775
Q ss_pred e--eEeeEec-cCcccEEEEEEecCCCEEEEEeC--CCeEEEEEcc
Q 017642 293 L--LQEVRRG-ADRAEIYSLAFSSNAQWLAVSSD--KGTVHVFNLK 333 (368)
Q Consensus 293 ~--~~~~~~~-~~~~~v~~l~~sp~~~~l~s~s~--dg~i~iwd~~ 333 (368)
. +..+... .+......++|+|||++|+++.. ++.|.+|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 4 2223221 12235689999999999877665 4899999996
No 167
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=1.5e-15 Score=147.10 Aligned_cols=247 Identities=10% Similarity=0.035 Sum_probs=167.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CC-----eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCC----
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DH-----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ---- 152 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~---- 152 (368)
.|...+..++|||||++||.+. ++ .|++||+++++.... .+ ....+..+.|++++..++.+..+..
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-~~---~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-VL---ERVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-EE---EEECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-cc---cCcccceEEEEeCCCEEEEEEECCccccc
Confidence 4545688999999999998776 22 599999987665422 22 1122456788888765555444311
Q ss_pred -------CCCCcEEEEeCCCCcE--EEEEe---cCCceeEEEEeeCccEEE---e-----CCcEEEEEcCC------Ce-
Q 017642 153 -------YPLNKVMIWDDHQSRC--IGELS---FRSEVRSVKLRRDRIIVV---L-----EQKIFVYNFAD------LK- 205 (368)
Q Consensus 153 -------~~~~~i~vwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~---~-----d~~i~vwd~~~------~~- 205 (368)
.....|++|++.+++. ...+. +...+..+.|+|||++++ . +..|++||+.+ +.
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 1123499999988762 22333 345578999999999887 2 46899999976 43
Q ss_pred EEEEEeccCCCeeEEEEecCCCeEEEEeecC-CCCeEEEEecCcce---eeeeeccCc--ceEEEEECCCCCEEEEEeCC
Q 017642 206 LLHQIETIANPKGLCAVSQGVGSLVLVCPGL-QKGQVRVEHYASKR---TKFIMAHDS--RIACFALTQDGQLLATSSTK 279 (368)
Q Consensus 206 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~-~dg~i~i~~~~~~~---~~~~~~~~~--~i~~v~~sp~g~~l~s~~~d 279 (368)
....+..+...+.. .|+++|+.+++..... ..+.|.+++..... ...+..|.. .+..++|++++.++++...+
T Consensus 278 ~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 278 KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 34555555555543 5889999877664211 13467777765532 344555543 68889999777888888888
Q ss_pred Cc-EEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE-e---CCCeEEEEEccCCC
Q 017642 280 GT-LVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS-S---DKGTVHVFNLKVNS 336 (368)
Q Consensus 280 g~-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~-s---~dg~i~iwd~~~~~ 336 (368)
+. .|.+||+.+++.+..+.. +.+.+..+.++|++..|+.. + ..++|++||+.+++
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCCEEEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 84 166778778887777765 46678899999999766533 2 45789999998876
No 168
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.71 E-value=9.9e-17 Score=155.68 Aligned_cols=233 Identities=8% Similarity=0.036 Sum_probs=155.3
Q ss_pred CEEEEEEcCCCCEEEEEeC----------CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCC
Q 017642 87 TLLHISFNQDHGCFAAGTD----------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLN 156 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~ 156 (368)
.|.+++|||||++|+++++ +.|++||+++++......+ ...+..+.|+|++..++.+.. +
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~~------~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVYQ------N 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC----CSSBCCEEECSSTTCEEEEET------T
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec----CcccccceECCCCCEEEEEEC------C
Confidence 4889999999999988764 5699999987654110112 123667889998877776643 8
Q ss_pred cEEEEeCCCCcEEEEEe--cCCce-----------------eEEEEeeCccEEE---eCC--------------------
Q 017642 157 KVMIWDDHQSRCIGELS--FRSEV-----------------RSVKLRRDRIIVV---LEQ-------------------- 194 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~--~~~~v-----------------~~~~~~~~~~~l~---~d~-------------------- 194 (368)
.|++||+.+++...... +...| .+++|+|||+.++ .|.
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 210 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTI 210 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEE
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccce
Confidence 99999998887754332 22222 4899999999888 231
Q ss_pred --------------cEEEEEcCCCeEE--EE------EeccCCCeeEEEEecCCCeEEEEeecCCCC--eEEEEe----c
Q 017642 195 --------------KIFVYNFADLKLL--HQ------IETIANPKGLCAVSQGVGSLVLVCPGLQKG--QVRVEH----Y 246 (368)
Q Consensus 195 --------------~i~vwd~~~~~~~--~~------~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg--~i~i~~----~ 246 (368)
.|++||+.+++.. .. +..+...+..++|+||++ +++......++ .|.+|+ .
T Consensus 211 ~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~~~~~ 289 (719)
T 1z68_A 211 NIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDFREDW 289 (719)
T ss_dssp EEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEECSSS
T ss_pred eecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcccCCC
Confidence 7889999887642 11 224666788999999964 33332222233 355566 4
Q ss_pred Ccce-eeee----eccCcceE-----EEEECCCCCEEEE--EeCCCc-EEEEEECCCCceeEeeEeccCcccEEEEEEec
Q 017642 247 ASKR-TKFI----MAHDSRIA-----CFALTQDGQLLAT--SSTKGT-LVRIFNTLDGTLLQEVRRGADRAEIYSLAFSS 313 (368)
Q Consensus 247 ~~~~-~~~~----~~~~~~i~-----~v~~sp~g~~l~s--~~~dg~-~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp 313 (368)
.... ...+ ..|...+. .+.|+|||+.|+. ...+|. .|.+||+.+++ ...+.. +...+..+.++
T Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~--~~~~v~~~~~~- 365 (719)
T 1z68_A 290 QTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS--GKWEAINIFRV- 365 (719)
T ss_dssp SSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC--SSSCEEEEEEE-
T ss_pred CCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc--CceEEEEEEEE-
Confidence 4433 3333 35666666 8899999995543 445553 17777877766 334543 34567888888
Q ss_pred CCCEEEEEeCC-----CeEEEEEccC
Q 017642 314 NAQWLAVSSDK-----GTVHVFNLKV 334 (368)
Q Consensus 314 ~~~~l~s~s~d-----g~i~iwd~~~ 334 (368)
+++.|+..+.+ +.+++|.+..
T Consensus 366 d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 366 TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 88877766654 8899999875
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.71 E-value=5.5e-15 Score=131.57 Aligned_cols=226 Identities=11% Similarity=0.021 Sum_probs=147.6
Q ss_pred EEEEEe--C-CeEEEEEecCCCcce--EEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC-CCcEEEEE
Q 017642 99 CFAAGT--D-HGFRIYNCDPFREIF--RRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH-QSRCIGEL 172 (368)
Q Consensus 99 ~l~~~~--d-~~i~iw~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~-~~~~~~~~ 172 (368)
+|++|+ . ++|.+|+++.....+ ...........+..+++++++..+++++. +.|.+|++. +++.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~------~~v~~~~~~~~g~~~~~~ 77 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM------KKWSSFAVKSPTEIVHEA 77 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB------TEEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc------ceEEEEEECCCCCEEEee
Confidence 345555 2 468888876433322 11211012234567888998876666654 489999987 77765544
Q ss_pred ec--CCceeEEEEeeCccE--EE----------------eCCcEEEEEcC-CCeEEEEEec----cCCCeeEEEEecCCC
Q 017642 173 SF--RSEVRSVKLRRDRII--VV----------------LEQKIFVYNFA-DLKLLHQIET----IANPKGLCAVSQGVG 227 (368)
Q Consensus 173 ~~--~~~v~~~~~~~~~~~--l~----------------~d~~i~vwd~~-~~~~~~~~~~----~~~~v~~~~~~~~~~ 227 (368)
.+ .+.+..++|+|+|+. ++ .++.+.+|++. +++....+.. +...+..++|+|+|+
T Consensus 78 ~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 78 SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 42 244667899999984 32 25789999997 4665544432 345678899999998
Q ss_pred eEEEEeecCCCCeEEEEecC-ccee---eeee--ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECC--CCceeE---
Q 017642 228 SLVLVCPGLQKGQVRVEHYA-SKRT---KFIM--AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTL--DGTLLQ--- 295 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~-~~~~---~~~~--~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~--~~~~~~--- 295 (368)
.++++ ...++.|++|+.. ...+ ..+. .|...+..++|+|||++|++++. ++. |.+|++. +++...
T Consensus 158 ~l~~~--~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~ 234 (365)
T 1jof_A 158 YLYSA--DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR-ICEYVIDPATHMPVYTHH 234 (365)
T ss_dssp EEEEE--ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCEEEEEE
T ss_pred EEEEE--cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe-EEEEEEeCCCCcEEEccc
Confidence 75443 3346789998775 3322 2232 24567899999999998888775 567 9999865 565431
Q ss_pred eeEecc-----Ccc------cEEEEE-EecCCCEEEEEeCC-C-----eEEEEEcc
Q 017642 296 EVRRGA-----DRA------EIYSLA-FSSNAQWLAVSSDK-G-----TVHVFNLK 333 (368)
Q Consensus 296 ~~~~~~-----~~~------~v~~l~-~sp~~~~l~s~s~d-g-----~i~iwd~~ 333 (368)
.+.... +.. .+..++ |+|||++|++++.+ + .|.+|++.
T Consensus 235 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 235 SFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred eEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 222110 111 488999 99999988776532 2 89999996
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=1e-15 Score=147.06 Aligned_cols=243 Identities=12% Similarity=-0.016 Sum_probs=161.4
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEE--e-CCeEEEEEecCCCcceEEEcccCCceeEE---------EEEEe--CCeEE
Q 017642 78 ESTSSSPPPTLLHISFNQDHGCFAAG--T-DHGFRIYNCDPFREIFRRDFERGGGIGVV---------EMLFR--CNILA 143 (368)
Q Consensus 78 ~~~~~~h~~~v~~~~~s~~g~~l~~~--~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~ 143 (368)
......|...|..++|++++.+++.. . ++...||........ +.+. .+...+. .+.++ |++..
T Consensus 16 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~l~-~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 16 AALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE--ESAL-PAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE--EESS-CTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc--ceeC-CCCccccccccccCCccceeeeecCCCe
Confidence 33455688899999999887777776 3 556899987443332 3333 3333333 34444 66544
Q ss_pred -EE-ecCCCCCCCCCcEEEEeCC--C-CcEEEEEe-----cCCceeEEEEeeCccEEE---eC----------CcEEEEE
Q 017642 144 -LV-GGGPDPQYPLNKVMIWDDH--Q-SRCIGELS-----FRSEVRSVKLRRDRIIVV---LE----------QKIFVYN 200 (368)
Q Consensus 144 -~~-s~~~d~~~~~~~i~vwd~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~---~d----------~~i~vwd 200 (368)
++ +...+ ..|++|++. . ++...... +...+..++|+|||+.++ .+ ..|++||
T Consensus 93 ~la~~~~~~-----~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 93 LLVFTHFGD-----QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp EEEEEBTTT-----CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred EEEEEECCC-----CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 33 33333 778888876 3 44333222 356788999999999887 34 4899999
Q ss_pred cCC------CeEEEEEe-ccCCCeeEEEEecCCCeEEEEeecC-----CCCeEEEEecC-cc---eeeee-eccCcceEE
Q 017642 201 FAD------LKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPGL-----QKGQVRVEHYA-SK---RTKFI-MAHDSRIAC 263 (368)
Q Consensus 201 ~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~g~-----~dg~i~i~~~~-~~---~~~~~-~~~~~~i~~ 263 (368)
+.+ ++. ..+. .+...+..++|+|||+.++++.... ....|++|+.. .. ....+ ..|...+..
T Consensus 168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp TTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred CCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 987 544 4444 4456677889999999765543111 11478887776 23 34444 445788999
Q ss_pred EEECCCCCEEEEEeCCC--cEEEEEECCCCceeEeeEeccCccc--------EEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 264 FALTQDGQLLATSSTKG--TLVRIFNTLDGTLLQEVRRGADRAE--------IYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 264 v~~sp~g~~l~s~~~dg--~~i~iwd~~~~~~~~~~~~~~~~~~--------v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
++|+|||+++++++.++ . |.+||+.+++....... +... +..++|+++++++++++. +.++||.++
T Consensus 247 ~~~spdg~l~~~~~~~~~~~-l~~~~~~~~~~~~l~~~--~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWN-LHRVDPATGAATQLCRR--EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp EEECTTSCEEEEECTTSSCE-EEEECTTTCCEEESSCC--SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred eEECCCCeEEEEECCCCCeE-EEEEECCCCceeecccc--cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 99999999888888888 5 66677666765543332 2111 567899999999999988 999999554
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.70 E-value=4.6e-14 Score=121.75 Aligned_cols=231 Identities=8% Similarity=-0.030 Sum_probs=161.0
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 83 SPPPTLLHISFNQDHG-CFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~-~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
.+.....+++|+|+|+ +++++. +++|.+|+.+.. . ..+. .+...+..+.+++++.++++...+ +.|.+
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~--~~~~-~~~~~~~~l~~~~dg~l~v~~~~~-----~~i~~ 94 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--L--SPEM-HPSHHQNGHCLNKQGHLIACSHGL-----RRLER 94 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--E--EEEE-SSCSSEEEEEECTTCCEEEEETTT-----TEEEE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--e--EEEE-CCCCCcceeeECCCCcEEEEecCC-----CeEEE
Confidence 4556778999999998 666666 778999998765 2 2332 445567889999988777776654 78999
Q ss_pred EeCCCCcEEEEEe-c----CCceeEEEEeeCccEEEeC--------------------CcEEEEEcCCCeEEEEEeccCC
Q 017642 161 WDDHQSRCIGELS-F----RSEVRSVKLRRDRIIVVLE--------------------QKIFVYNFADLKLLHQIETIAN 215 (368)
Q Consensus 161 wd~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~d--------------------~~i~vwd~~~~~~~~~~~~~~~ 215 (368)
||..+++...... . ...+..++++++|++++.| +.|..++.. ++. ..+..+..
T Consensus 95 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~ 172 (296)
T 3e5z_A 95 QREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRV 172 (296)
T ss_dssp ECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCS
T ss_pred EcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCC
Confidence 9988887654432 1 2356789999999988842 355555544 443 34444555
Q ss_pred CeeEEEEecCCCeEEEEeecCCCCeEEEEecC--cce---eeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC
Q 017642 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SKR---TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 216 ~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~--~~~---~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
....++|+++++.+ ++ ...++.|.+|+.. +.. ...+..+...+.+++++++|+++++. ++. |.+||..
T Consensus 173 ~~~gi~~s~dg~~l-v~--~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~- 245 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VS--DTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD- 245 (296)
T ss_dssp SEEEEEECTTSCEE-EE--ETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-
T ss_pred CCccEEECCCCCEE-EE--eCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-
Confidence 66789999999864 32 4567888887764 222 22233345567789999999976666 677 9999975
Q ss_pred CceeEeeEeccCcccEEEEEE-ecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 291 GTLLQEVRRGADRAEIYSLAF-SSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~-sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
++.+..+.. +.. +.+++| +++++.|++++.++ |.-++.++.+
T Consensus 246 g~~~~~~~~--~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 246 GDELGRVLT--PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp SCEEEEEEC--SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred CCEEEEEEC--CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 787777776 444 899999 58999888888764 4445554443
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=2.3e-15 Score=133.67 Aligned_cols=233 Identities=12% Similarity=0.089 Sum_probs=154.0
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEEecCCCcceEEEcccC---CceeEEEEEEeCCeEEEEecC--CCCCC
Q 017642 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFERG---GGIGVVEMLFRCNILALVGGG--PDPQY 153 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~--~d~~~ 153 (368)
.++|+|||++|+++. ++.|.+||..+.+......+... +......+.+++++.+++.+. .+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~--- 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPA--- 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSS---
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCC---
Confidence 889999999998875 34599999887665533332100 122344677888876665543 23
Q ss_pred CCCcEEEEeCCCCcEEEE-EecCCceeEEEEeeCc--cEEE--eCCcEEEEEcCC-CeEEEEE------eccCCCeeEEE
Q 017642 154 PLNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDR--IIVV--LEQKIFVYNFAD-LKLLHQI------ETIANPKGLCA 221 (368)
Q Consensus 154 ~~~~i~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~--~~l~--~d~~i~vwd~~~-~~~~~~~------~~~~~~v~~~~ 221 (368)
+.|.+||+.+++.+.. +...+. ..+.+.|++ .+++ .||.+.+|++.. ++..... .....++ .+.
T Consensus 131 --~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~ 206 (361)
T 2oiz_A 131 --TSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIA 206 (361)
T ss_dssp --EEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSC
T ss_pred --CeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEE
Confidence 7899999999998888 664332 335667765 2233 588999999865 5544221 1222222 234
Q ss_pred EecCCCeEEEEeecCCCCeEEEEecCcceeee---eec------cC----cceEEEEECCCCCEEEEEeC----------
Q 017642 222 VSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF---IMA------HD----SRIACFALTQDGQLLATSST---------- 278 (368)
Q Consensus 222 ~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~---~~~------~~----~~i~~v~~sp~g~~l~s~~~---------- 278 (368)
+.+++..++++. .++.+.+++........ +.. +. .....++|+|+++.++++..
T Consensus 207 ~~~~g~~~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 207 PALDKDKAHFVS---YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp CEECSSEEEEEB---TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred ecccCCEEEEEe---CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence 467776655432 57888887665432211 110 00 11123789999887776543
Q ss_pred -CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC--CCC
Q 017642 279 -KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN--SGS 338 (368)
Q Consensus 279 -dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~--~~~ 338 (368)
.+. |.+||+.+++.+..+.. +. +.+++|+|||++|++++. +.|.+||..++ +..
T Consensus 284 ~~~~-v~viD~~t~~~v~~i~~--~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 284 PAAE-IWVMDTKTKQRVARIPG--RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp CCSE-EEEEETTTTEEEEEEEC--TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred CCce-EEEEECCCCcEEEEEec--CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence 346 99999999999999987 33 899999999999998887 99999999998 544
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=1.6e-14 Score=127.41 Aligned_cols=224 Identities=8% Similarity=0.029 Sum_probs=146.9
Q ss_pred CCEEEEEEcCCCCEEEEEe----------CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCC
Q 017642 86 PTLLHISFNQDHGCFAAGT----------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPL 155 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~ 155 (368)
..+..+++ ||++++... +..|.+|+++.++.. .+ ..+..+.|+|++..++....+..-..
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l-----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI-----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE-----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec-----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 45777888 999887642 334888888765432 22 33567788888765554432100001
Q ss_pred CcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--e-C---------------------------CcEEEEEcCCCe
Q 017642 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--L-E---------------------------QKIFVYNFADLK 205 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~-d---------------------------~~i~vwd~~~~~ 205 (368)
..|.+||+.+++......+.. +..++|+||++.++ . + ..|++||+.+++
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred ceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 358899998887766666555 99999999998777 2 2 469999999888
Q ss_pred EEEEEeccCCCeeEEEEecCCCeEEEEeecCCC----C-eEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCC-
Q 017642 206 LLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK----G-QVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTK- 279 (368)
Q Consensus 206 ~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~d----g-~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~d- 279 (368)
.+..+.. . .+..+.|+|+| ++++.....+ . ...||..+......+..+ ..+..+ +|||++|+.++.+
T Consensus 164 ~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 164 VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred EEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 7455544 3 77889999998 3333321111 2 334433224444455555 555554 9999988877644
Q ss_pred -------CcEEEEEECCCCceeEeeEeccCcccEEE-EEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 280 -------GTLVRIFNTLDGTLLQEVRRGADRAEIYS-LAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 280 -------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~-l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
.. |.+|| +++....... +...+.. +.|+ |+ ++++++.++.++|| +.++
T Consensus 237 ~~~~~~~~~-l~~~d--~~~~~~l~~~--~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g 292 (347)
T 2gop_A 237 KKYMSEHNK-LYIYD--GKEVMGILDE--VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG 292 (347)
T ss_dssp SSCCCSSCE-EEEEC--SSCEEESSTT--CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS
T ss_pred cCCccccce-EEEEC--CCceEecccc--CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC
Confidence 35 88888 5554433332 4567886 9999 88 88899999999999 8843
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.67 E-value=2.2e-14 Score=126.49 Aligned_cols=227 Identities=12% Similarity=0.098 Sum_probs=146.9
Q ss_pred CCEEEEEEcCCCCEEEEEe-C---Ce--EEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCC--------
Q 017642 86 PTLLHISFNQDHGCFAAGT-D---HG--FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDP-------- 151 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~-d---~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~-------- 151 (368)
..+..++|+|||++|+... + +. |.+|+++.++.. ... .... +..+.|++++..++....+.
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~--~l~--~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK--KIL--EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE--EEE--EESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE--EEE--cCCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 4678899999999998876 3 33 666776654433 222 1223 78889998876554432110
Q ss_pred -----------CC---CCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE-e--C------C-cEEEEEcCCCeEE
Q 017642 152 -----------QY---PLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L--E------Q-KIFVYNFADLKLL 207 (368)
Q Consensus 152 -----------~~---~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~--d------~-~i~vwd~~~~~~~ 207 (368)
.| ....|++||+.+++.+..+... .+..+.|+||| +++ . + . ...||.+.+++..
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~ 211 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE 211 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE
Confidence 00 0157999999988874555433 88999999999 555 2 2 2 3344444455543
Q ss_pred EEEeccCCCeeEEEEecCCCeEEEEeecC-----CCCeEEEEecCcceeeeeeccCcceEE-EEECCCCCEEEEEeCCCc
Q 017642 208 HQIETIANPKGLCAVSQGVGSLVLVCPGL-----QKGQVRVEHYASKRTKFIMAHDSRIAC-FALTQDGQLLATSSTKGT 281 (368)
Q Consensus 208 ~~~~~~~~~v~~~~~~~~~~~~~l~~~g~-----~dg~i~i~~~~~~~~~~~~~~~~~i~~-v~~sp~g~~l~s~~~dg~ 281 (368)
.+..+ ..+.. ++|+|+.++++.... ....|.+++ .++.......+...+.. +.|+ +| ++++++.++.
T Consensus 212 -~l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 212 -KMFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp -EEEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred -EeccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 33333 44443 499999865543211 124677777 55444444566777886 9999 88 8999999998
Q ss_pred EEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeE-EEEEcc
Q 017642 282 LVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV-HVFNLK 333 (368)
Q Consensus 282 ~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i-~iwd~~ 333 (368)
++|| +.+++.. .+.. +.+.|.+++|++ .++++++.++.. .||.++
T Consensus 285 -~~l~-~~~g~~~-~~~~--~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 285 -VNLY-IWDGEIK-PIAK--GRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -EEEE-EESSSEE-EEEC--SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -EEEE-EcCCceE-EEec--CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999 8766654 3433 456899999999 677777766654 777775
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.67 E-value=3.8e-14 Score=127.11 Aligned_cols=229 Identities=10% Similarity=0.007 Sum_probs=145.2
Q ss_pred EEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEE---E----------------EEeCCeEEEEec--
Q 017642 90 HISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVE---M----------------LFRCNILALVGG-- 147 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~s~-- 147 (368)
.+.|+|||++|+.+. ++.|++|++.+++....... +...... + .+++++..++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTV---DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC---CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec---ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 368999999998887 66799999887654433222 1111111 1 122222221111
Q ss_pred ---CCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEee-CccEEE--eC-------CcEEEEEcCCCeEEEEEecc-
Q 017642 148 ---GPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRR-DRIIVV--LE-------QKIFVYNFADLKLLHQIETI- 213 (368)
Q Consensus 148 ---~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~--~d-------~~i~vwd~~~~~~~~~~~~~- 213 (368)
..+ ..|++||+.+++......+...+..+.|+| ++..++ .+ ..|.+||+..++.. .+..+
T Consensus 162 ~~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~ 235 (396)
T 3c5m_A 162 YHTNPT-----CRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHA 235 (396)
T ss_dssp HHTCCC-----EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCC
T ss_pred ccCCCc-----ceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccC
Confidence 222 689999999988776666788899999999 787555 21 47999998765433 33222
Q ss_pred -CCCeeEEEEecCCCeEEEEeecCCC--CeEEEEecCcceeeeeeccCcceEEEEECC-CCCEEEEEe------------
Q 017642 214 -ANPKGLCAVSQGVGSLVLVCPGLQK--GQVRVEHYASKRTKFIMAHDSRIACFALTQ-DGQLLATSS------------ 277 (368)
Q Consensus 214 -~~~v~~~~~~~~~~~~~l~~~g~~d--g~i~i~~~~~~~~~~~~~~~~~i~~v~~sp-~g~~l~s~~------------ 277 (368)
...+..++|+|+|+.++++...... +.|++|+........+..... .. +.|+| ||++|++++
T Consensus 236 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 236 EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC---------
T ss_pred CCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccc
Confidence 2246778999999986655321112 448888876554444432222 33 88999 999888754
Q ss_pred ----CCCcEEEEEECCCCceeEeeEeccCcc-----------cEEEEEEecCCCEEEEEeC-CCeEEEEEcc
Q 017642 278 ----TKGTLVRIFNTLDGTLLQEVRRGADRA-----------EIYSLAFSSNAQWLAVSSD-KGTVHVFNLK 333 (368)
Q Consensus 278 ----~dg~~i~iwd~~~~~~~~~~~~~~~~~-----------~v~~l~~sp~~~~l~s~s~-dg~i~iwd~~ 333 (368)
.++. |++||+.+++.. .+.. +.. .+..++|+|||+.|+.++. ++...||.+.
T Consensus 314 ~~~~~~~~-i~~~d~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 314 YNIENDPF-LYVLNTKAKSAQ-KLCK--HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp -CCCCCCE-EEEEETTTTBCC-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccCCCCc-EEEEecccCceE-EccC--CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 2356 999999887754 4443 222 2567899999998887764 5555555554
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=2.4e-14 Score=121.63 Aligned_cols=236 Identities=8% Similarity=-0.046 Sum_probs=159.2
Q ss_pred CEEEEEEcCCCCEEE-EEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 87 TLLHISFNQDHGCFA-AGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~-~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
...+++++++|++++ +.. ++.|.+|+....... .+...+......+++++++.++++.. + +.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~-~-----~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT---VLPFNGLYQPQGLAVDGAGTVYVTDF-N-----NRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----E---ECCCCSCCSCCCEEECTTCCEEEEET-T-----TEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccc---eEeeCCcCCcceeEECCCCCEEEEcC-C-----CEEEEEeCC
Confidence 678999999999776 434 677999986543321 11112334456778888776666654 4 899999976
Q ss_pred CCcEEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCC
Q 017642 165 QSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKG 239 (368)
Q Consensus 165 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg 239 (368)
.... ..+. ....+.++++++++.+++ .++.|.+|+..+................+++.++++ ++++. ..++
T Consensus 96 ~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~--~~~~ 171 (270)
T 1rwi_B 96 SNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTD--TDNN 171 (270)
T ss_dssp CSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEE--GGGT
T ss_pred CceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEE--CCCC
Confidence 6543 3333 336789999999998776 367899998655443322222233567799999886 44432 3467
Q ss_pred eEEEEecCcceeeee-eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEE
Q 017642 240 QVRVEHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWL 318 (368)
Q Consensus 240 ~i~i~~~~~~~~~~~-~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 318 (368)
.|.+++..+...... ..+...+.+|+++++|.++++...++. |.+||........ +... +...+.+++++++|+++
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~-~~~~-~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTV-LPFT-GLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEE-CCCC-SCSCEEEEEECTTCCEE
T ss_pred EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCccee-eccC-CCCCceeEEECCCCCEE
Confidence 888877766544332 233366899999999987777777888 9999986654332 2211 23468999999999988
Q ss_pred EEEeCCCeEEEEEccCCCCC
Q 017642 319 AVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 319 ~s~s~dg~i~iwd~~~~~~~ 338 (368)
++...++.|++|++...+..
T Consensus 249 v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 249 VADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp EEEGGGTEEEEECCCGGGSC
T ss_pred EEECCCCEEEEEcCCCcccc
Confidence 88889999999999876654
No 177
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.66 E-value=5.3e-15 Score=143.91 Aligned_cols=192 Identities=11% Similarity=0.118 Sum_probs=139.0
Q ss_pred EEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCC-----ceeEEEEeeCccEEE--eC----------
Q 017642 132 VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRS-----EVRSVKLRRDRIIVV--LE---------- 193 (368)
Q Consensus 132 ~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~-----~v~~~~~~~~~~~l~--~d---------- 193 (368)
...+.|++++.+++++ | +.|++||+.++++...+. +.. ....+.|+|||+.++ .+
T Consensus 19 ~~~~~w~~dg~~~~~~--~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--E-----NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCEEECSSSEEEEEE--T-----TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccEECCCCcEEEEc--C-----CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 4578899999888886 5 999999999999877776 332 224488999999888 22
Q ss_pred CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeee--ccCcce----------
Q 017642 194 QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM--AHDSRI---------- 261 (368)
Q Consensus 194 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~--~~~~~i---------- 261 (368)
+.+++||+.+++... +..+...+...+|+|||+.++++ .++.|++|+..+.....+. ++...+
T Consensus 92 ~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~la~~----~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHKLAYV----WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTCEEEE----ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred eEEEEEECCCCcEEE-cccCCCcceeeEECCCCCEEEEE----ECCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 678899999987653 55566788999999999985543 3789999887654444332 232222
Q ss_pred -------EEEEECCCCCEEEEEeCCC------------------------------------cEEEEEECCC---Cc--e
Q 017642 262 -------ACFALTQDGQLLATSSTKG------------------------------------TLVRIFNTLD---GT--L 293 (368)
Q Consensus 262 -------~~v~~sp~g~~l~s~~~dg------------------------------------~~i~iwd~~~---~~--~ 293 (368)
..+.|||||++||.++.|. . |++||+.+ ++ .
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~-l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK-FFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE-EEEEETTSCCSSSCCC
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE-EEEEECCCCCCCCcce
Confidence 3589999999999875321 4 88899988 73 2
Q ss_pred eEeeEec----cCcccEEEEEEecCCCEEEEEeC----CCeEEEEEccCCC
Q 017642 294 LQEVRRG----ADRAEIYSLAFSSNAQWLAVSSD----KGTVHVFNLKVNS 336 (368)
Q Consensus 294 ~~~~~~~----~~~~~v~~l~~sp~~~~l~s~s~----dg~i~iwd~~~~~ 336 (368)
...+... .+...+..++|+|||+.++.... +..|++||+.+++
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 2233321 15567999999999997665532 3479999999886
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=1.4e-14 Score=139.23 Aligned_cols=236 Identities=11% Similarity=0.010 Sum_probs=149.2
Q ss_pred EEEEc--CCCCE-EEEEeCCeEEEEEecCC----CcceEEEcccC-----CceeEEEEEEeCCeEEEEecCCCCC-----
Q 017642 90 HISFN--QDHGC-FAAGTDHGFRIYNCDPF----REIFRRDFERG-----GGIGVVEMLFRCNILALVGGGPDPQ----- 152 (368)
Q Consensus 90 ~~~~s--~~g~~-l~~~~d~~i~iw~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~s~~~d~~----- 152 (368)
...|+ |||+. |+.+.+....||.++.. ... ..+. . +...+..+.|++++..++..+.+..
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~--~~l~-~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~ 157 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP--RPLT-PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPS 157 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC--EECS-CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTT
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC--Eecc-CCccCCCCccccCcEECCCCCEEEEEEecccCCCCC
Confidence 45555 99998 88777544444444432 222 2332 2 5667888999998876665543200
Q ss_pred CCCCcEEEEeCCC------CcEEEEE-ecCCceeEEEEeeCccEEE---eC--------CcEEEEEcC-CC---eEEEEE
Q 017642 153 YPLNKVMIWDDHQ------SRCIGEL-SFRSEVRSVKLRRDRIIVV---LE--------QKIFVYNFA-DL---KLLHQI 210 (368)
Q Consensus 153 ~~~~~i~vwd~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~---~d--------~~i~vwd~~-~~---~~~~~~ 210 (368)
.....|++||+.+ ++..... .+...+..++|+|||+.++ .+ ..|++||+. ++ +.....
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 158 DVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp CEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred CceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 0014799999988 6655444 4566788899999999887 23 379999998 57 444444
Q ss_pred eccCCCeeEEEEecCCCeEEEEeecCCCCe--EEEEecCcceeeeeeccC-cc--------eEEEEECCCCCEEEEEeCC
Q 017642 211 ETIANPKGLCAVSQGVGSLVLVCPGLQKGQ--VRVEHYASKRTKFIMAHD-SR--------IACFALTQDGQLLATSSTK 279 (368)
Q Consensus 211 ~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~--i~i~~~~~~~~~~~~~~~-~~--------i~~v~~sp~g~~l~s~~~d 279 (368)
..+...+..+.|+|||+ ++++ +..++. |.+++........+..+. .. +..++|+++++++++++.
T Consensus 238 ~~~~~~~~~~~~spdg~-l~~~--~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGS-LIVA--TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp EETTBCEEEEEECTTSC-EEEE--ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CCCCceEcceEECCCCe-EEEE--ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 44567888999999998 4433 346774 444554344333333322 21 567899999999999998
Q ss_pred CcEEEEE--ECCCCceeEeeEeccCcccEEEE-EEecCCCEEEEEeCCCe--EEEEEccCCC
Q 017642 280 GTLVRIF--NTLDGTLLQEVRRGADRAEIYSL-AFSSNAQWLAVSSDKGT--VHVFNLKVNS 336 (368)
Q Consensus 280 g~~i~iw--d~~~~~~~~~~~~~~~~~~v~~l-~~sp~~~~l~s~s~dg~--i~iwd~~~~~ 336 (368)
+. ++|| |+.+++ +..+.. +...+..+ +++.+.-++++++.+.. |++||+.+++
T Consensus 314 ~~-~~l~~~d~~~~~-~~~l~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 314 GA-AVLGILDPESGE-LVDAAG--PWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SS-CEEEEEETTTTE-EEECCS--SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred Cc-cEEEEEECCCCc-EEEecC--CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88 8999 555555 556655 45567766 44433334445555554 5555655554
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=4.8e-13 Score=117.26 Aligned_cols=242 Identities=9% Similarity=0.006 Sum_probs=159.6
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
.+...+.+++|+++|++++++. +++|.+||.++++.... .. .+...+..+.+++++.++++...+. ...+.|.+|
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~--~~-~~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~ 117 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRP--FV-SHKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAA 117 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEE--EE-CSSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEE--ee-CCCCCcceEEECCCCcEEEEeCCCC-CCCceEEEE
Confidence 4556789999999999877777 67799999876554321 21 3445688899998877666544210 001479999
Q ss_pred eCCCCcEEEEEe---cCCceeEEEEeeCccEEEeC---------CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeE
Q 017642 162 DDHQSRCIGELS---FRSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSL 229 (368)
Q Consensus 162 d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~d---------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 229 (368)
|..+++....+. ....+.++++++++.+++.+ +.|..||..+++... +.........++|+++++.+
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l 196 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVL 196 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEE
Confidence 988877654433 34578999999999887721 356666655544433 22233456789999999876
Q ss_pred EEEeecCCCCeEEEEecC--cceeee--------eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 230 VLVCPGLQKGQVRVEHYA--SKRTKF--------IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~--~~~~~~--------~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
+++. ..++.|.+|+.. +..... +..+ ..+..++++++|+++++...++. |.+||. +++.+..+..
T Consensus 197 ~v~~--~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 197 WVTE--TTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQILI 271 (333)
T ss_dssp EEEE--GGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEEC
T ss_pred EEEe--CCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEEc
Confidence 6543 346788887763 222221 1122 36788999999998888777888 999997 5777766654
Q ss_pred ccC----cccEEEEEEecCCCEEEEEeCCC----eEEEEEccC
Q 017642 300 GAD----RAEIYSLAFSSNAQWLAVSSDKG----TVHVFNLKV 334 (368)
Q Consensus 300 ~~~----~~~v~~l~~sp~~~~l~s~s~dg----~i~iwd~~~ 334 (368)
... ...+.+++|++|++.|+.++.++ .-.||.++.
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 211 11588999999987776655442 244555543
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.63 E-value=7.3e-15 Score=141.90 Aligned_cols=245 Identities=9% Similarity=-0.049 Sum_probs=158.6
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe------CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCC----
Q 017642 83 SPPPTLLHISFNQDHGCFAAGT------DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQ---- 152 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~---- 152 (368)
.|...+..++|||||++||.+. +..|++||+++++......+. ......+.|++++..++....|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~---~~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE---GGKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS---CCTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC---cccccceEEecCCCEEEEEEecCCCCCc
Confidence 4556789999999999998543 235999999887653111221 111246788888776666554410
Q ss_pred ----CCCCcEEEEeCCCCcE--EEEEe---cCCceeEEEEeeCccEEE---eCC----cEEEEEcCCCeEEEEEeccCCC
Q 017642 153 ----YPLNKVMIWDDHQSRC--IGELS---FRSEVRSVKLRRDRIIVV---LEQ----KIFVYNFADLKLLHQIETIANP 216 (368)
Q Consensus 153 ----~~~~~i~vwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~---~d~----~i~vwd~~~~~~~~~~~~~~~~ 216 (368)
.....|++|++.+++. ...+. +...+..+.|+|||++++ .++ .|++||..+++. ..+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 0113499999988762 23333 345788999999999887 344 677777655543 344444445
Q ss_pred eeEEEEecCCCeEEEEeec-CCCCeEEEEecCcce---eeeeecc--CcceEEEEECCCCCEEEEEeCCCcEEEEEECC-
Q 017642 217 KGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYASKR---TKFIMAH--DSRIACFALTQDGQLLATSSTKGTLVRIFNTL- 289 (368)
Q Consensus 217 v~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~~~---~~~~~~~--~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~- 289 (368)
+....+ ++++ +++.+.. ..++.|.+|+..... ...+..+ ...+..++|+ ++.++++...|+. .+||.+.
T Consensus 274 ~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~ 349 (695)
T 2bkl_A 274 KYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVATL 349 (695)
T ss_dssp CEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEET
T ss_pred eEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeC
Confidence 555555 6777 5554321 135778887765433 2344333 4568888888 6778888899988 8887654
Q ss_pred CCceeEeeEeccCcccEEEEEEecCCCEEEEE----eCCCeEEEEEccCCC
Q 017642 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS----SDKGTVHVFNLKVNS 336 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~----s~dg~i~iwd~~~~~ 336 (368)
+++.+..+... ..+.+..+.++|+++.|+.. ...++|++||+.+++
T Consensus 350 ~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 350 KGKPVRTVQLP-GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TCCEEEECCCS-SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCCeeEEecCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 46655555542 25678888999999876633 235789999998765
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=3.3e-13 Score=118.13 Aligned_cols=235 Identities=10% Similarity=0.034 Sum_probs=158.5
Q ss_pred CEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 87 TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
....+.+. +++++++.. ++.|.+||..+++... .+. .......+++++++.++++...+ +.|.+||..+
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~--~i~--~~~~p~~i~~~~~g~lyv~~~~~-----~~v~~iD~~t 114 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVG--RIT--GFTSPRYIHFLSDEKAYVTQIWD-----YRIFIINPKT 114 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEE--EEE--CCSSEEEEEEEETTEEEEEEBSC-----SEEEEEETTT
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEE--EcC--CCCCCcEEEEeCCCeEEEEECCC-----CeEEEEECCC
Confidence 45677774 344444444 6779999988776653 332 23445667776666666665344 8999999999
Q ss_pred CcEEEEEecCC------ceeEEEEeeCccEEE--e--CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeec
Q 017642 166 SRCIGELSFRS------EVRSVKLRRDRIIVV--L--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 166 ~~~~~~~~~~~------~v~~~~~~~~~~~l~--~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
++....+.... ....+++ .++++++ . ++.|.+||+++++.+..+.... ....++++++|+ +++++.+
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~-l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNK-MWTITDG 191 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSE-EEEEBCC
T ss_pred CeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCC-EEEEECC
Confidence 99888887444 6677888 4555544 2 6789999999999888876543 345688899886 4444422
Q ss_pred CC--------CCeEEEEecCc-ceeeeeecc-CcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCccc
Q 017642 236 LQ--------KGQVRVEHYAS-KRTKFIMAH-DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAE 305 (368)
Q Consensus 236 ~~--------dg~i~i~~~~~-~~~~~~~~~-~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~ 305 (368)
.. .+.|.+++... +....+... ......++|+|++++|+++.. . |.+||..+++.............
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCCSSCSBCCCSSC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCceeeeeeecCCCCc
Confidence 21 26788866654 444344322 236799999999998887765 6 99999988876421111101346
Q ss_pred EEEEEEec-CCCEEEEE----eCCCeEEEEEccCCCCC
Q 017642 306 IYSLAFSS-NAQWLAVS----SDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 306 v~~l~~sp-~~~~l~s~----s~dg~i~iwd~~~~~~~ 338 (368)
...++++| ++.++++. ..++.|.+||.+ ++..
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 88999999 55666665 568899999987 6543
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.62 E-value=4.4e-13 Score=114.19 Aligned_cols=211 Identities=12% Similarity=0.037 Sum_probs=155.5
Q ss_pred CCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEec
Q 017642 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (368)
Q Consensus 96 ~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~ 174 (368)
.+++|++++ ++.|.+||.++++....... .....+.++.+.+++.++++.. +.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~--~~~~~~~~~~~~pdG~ilvs~~-------~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL--EKGWECNSVAATKAGEILFSYS-------KGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC--CTTCCCCEEEECTTSCEEEECB-------SEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC--CccCCCcCeEECCCCCEEEeCC-------CCEEEECC-CCCEEEEEcC
Confidence 457788887 77899999877777655443 2213566777888888888542 78999998 8999999883
Q ss_pred --CCceeEEEEeeCccEEEe----CCcEEEEEcCCCeEEEEEeccC------CCeeEEEEecCCCeEEEEeecCCCCeEE
Q 017642 175 --RSEVRSVKLRRDRIIVVL----EQKIFVYNFADLKLLHQIETIA------NPKGLCAVSQGVGSLVLVCPGLQKGQVR 242 (368)
Q Consensus 175 --~~~v~~~~~~~~~~~l~~----d~~i~vwd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~l~~~g~~dg~i~ 242 (368)
...+.++.+.++|.+++. ++.|..+|. +|+.+..+.... .....+++.++|+. +++ ...++.|.
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~--lv~-~~~~~~v~ 149 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY--LVP-LFATSEVR 149 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE--EEE-ETTTTEEE
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE--EEE-ecCCCEEE
Confidence 357889999999999882 456666674 788777765221 23345677888874 333 45789999
Q ss_pred EEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc----CcccEEEEEEecCCCEE
Q 017642 243 VEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA----DRAEIYSLAFSSNAQWL 318 (368)
Q Consensus 243 i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~----~~~~v~~l~~sp~~~~l 318 (368)
.++..++.+..+... ..+.++.+.++|++++++..++. |..+|..+|+.+.++.... .-..+..+...++|.++
T Consensus 150 ~~d~~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 150 EIAPNGQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp EECTTSCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred EECCCCCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 988888887777654 34566788899999999888888 9999999999998887421 11237888889999988
Q ss_pred EEEe
Q 017642 319 AVSS 322 (368)
Q Consensus 319 ~s~s 322 (368)
++..
T Consensus 228 v~~~ 231 (276)
T 3no2_A 228 ICNW 231 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8773
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=1.1e-12 Score=114.94 Aligned_cols=217 Identities=9% Similarity=0.038 Sum_probs=155.0
Q ss_pred CCeEEEEEecCCCcceEEEcc---c--CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCcee
Q 017642 105 DHGFRIYNCDPFREIFRRDFE---R--GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVR 179 (368)
Q Consensus 105 d~~i~iw~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~ 179 (368)
+++|.+||.++++.. ..+. . ........+.+..+.++++.... +.|.+||..+++.+.++.......
T Consensus 16 ~~~l~~~d~~t~~~~--~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~~------~~v~viD~~t~~~~~~i~~~~~p~ 87 (328)
T 3dsm_A 16 NATLSYYDPATCEVE--NEVFYRANGFKLGDVAQSMVIRDGIGWIVVNNS------HVIFAIDINTFKEVGRITGFTSPR 87 (328)
T ss_dssp CBEEEEEETTTTEEE--CSHHHHHHSSCCBSCEEEEEEETTEEEEEEGGG------TEEEEEETTTCCEEEEEECCSSEE
T ss_pred CceEEEEECCCCEEh--hhhHhhhcCcccCccceEEEEECCEEEEEEcCC------CEEEEEECcccEEEEEcCCCCCCc
Confidence 566999998765533 2221 0 11223456677777777776543 899999999999999988777899
Q ss_pred EEEEeeCccEEE-e--CCcEEEEEcCCCeEEEEEeccC-----CCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ce
Q 017642 180 SVKLRRDRIIVV-L--EQKIFVYNFADLKLLHQIETIA-----NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KR 250 (368)
Q Consensus 180 ~~~~~~~~~~l~-~--d~~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~ 250 (368)
.+++++++++.+ . ++.|.+||..+++....+.... .....+++ +++.++++. -..++.|.+++... +.
T Consensus 88 ~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~-~~~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNC-WSYQNRILKIDTETDKV 164 (328)
T ss_dssp EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEE-CTTCCEEEEEETTTTEE
T ss_pred EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEc-CCCCCEEEEEECCCCeE
Confidence 999999987666 3 6899999999999887776443 03345666 556655543 22477888866554 44
Q ss_pred eeeeeccCcceEEEEECCCCCEEEEEeCC----------CcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEE
Q 017642 251 TKFIMAHDSRIACFALTQDGQLLATSSTK----------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAV 320 (368)
Q Consensus 251 ~~~~~~~~~~i~~v~~sp~g~~l~s~~~d----------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s 320 (368)
...+.. ......++++++|++++++..+ +. |.++|..+++....+... .......++|+|+++.|++
T Consensus 165 ~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 165 VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECC-TTCCCEEEEECTTSCEEEE
T ss_pred EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecC-CCCCceeEEEecCCCEEEE
Confidence 444543 2345788999999977776654 67 999999999887776542 1236889999999999888
Q ss_pred EeCCCeEEEEEccCCCC
Q 017642 321 SSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 321 ~s~dg~i~iwd~~~~~~ 337 (368)
+.. .|.+||+.+++.
T Consensus 242 ~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 242 INN--DIWRMPVEADRV 256 (328)
T ss_dssp ESS--SEEEEETTCSSC
T ss_pred Ecc--EEEEEECCCCce
Confidence 754 899999987764
No 184
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=3.4e-12 Score=110.72 Aligned_cols=235 Identities=10% Similarity=0.049 Sum_probs=159.2
Q ss_pred CCEEEEEEcCCCCEEEE-------Ee-CCeEEEEEecCCCcceEEEcc--cCCceeEEEEEEeCC-eEEEEecCCCCCCC
Q 017642 86 PTLLHISFNQDHGCFAA-------GT-DHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCN-ILALVGGGPDPQYP 154 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~-------~~-d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~s~~~d~~~~ 154 (368)
....+++|+++|+++++ +. +++|.+|+..+++.... ... ..+...+..+.++++ +.++++...
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~----- 91 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI-CKPEVNGYGGIPAGCQCDRDANQLFVADMR----- 91 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE-ECCEETTEECCEEEEEECSSSSEEEEEETT-----
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE-EecccCCCCCCCceEEEecCCCcEEEEECC-----
Confidence 35678999999998887 34 77899999765543211 110 013345778889888 765555443
Q ss_pred CCcEEEEeCCCCcEEEE-Ee-----cCCceeEEEEeeCccEEEe---C---------------CcEEEEEcCCCeEEEEE
Q 017642 155 LNKVMIWDDHQSRCIGE-LS-----FRSEVRSVKLRRDRIIVVL---E---------------QKIFVYNFADLKLLHQI 210 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~---d---------------~~i~vwd~~~~~~~~~~ 210 (368)
+.|.+||.. ++.... .. ....+.+++++++|.+++. + +.|..||.. ++.....
T Consensus 92 -~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~ 168 (314)
T 1pjx_A 92 -LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD 168 (314)
T ss_dssp -TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE
T ss_pred -CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec
Confidence 579999988 765433 22 1235889999999987772 2 457777765 5544333
Q ss_pred eccCCCeeEEEEe----cCCCeEEEEeecCCCCeEEEEecC--cc-----eeeeeeccC-cceEEEEECCCCCEEEEEeC
Q 017642 211 ETIANPKGLCAVS----QGVGSLVLVCPGLQKGQVRVEHYA--SK-----RTKFIMAHD-SRIACFALTQDGQLLATSST 278 (368)
Q Consensus 211 ~~~~~~v~~~~~~----~~~~~~~l~~~g~~dg~i~i~~~~--~~-----~~~~~~~~~-~~i~~v~~sp~g~~l~s~~~ 278 (368)
........++++ ++++.++++ ...++.|.+|+.. +. ....+..+. ..+..++++++|+++++...
T Consensus 169 -~~~~~~~~i~~~~~~d~dg~~l~v~--~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 169 -TAFQFPNGIAVRHMNDGRPYQLIVA--ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp -EEESSEEEEEEEECTTSCEEEEEEE--ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred -cCCCCcceEEEecccCCCCCEEEEE--ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 233345678899 888765554 3356788886643 22 122233333 56789999999998888777
Q ss_pred CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEE-EEeCCCeEEEEEccCC
Q 017642 279 KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLA-VSSDKGTVHVFNLKVN 335 (368)
Q Consensus 279 dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~-s~s~dg~i~iwd~~~~ 335 (368)
++. |.+||..+++.+..+.. +...+.+++|+++|+.|+ +...++.|..|++...
T Consensus 246 ~~~-i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 SSH-IEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTE-EEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCE-EEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 888 99999887877766665 446799999999999555 4456688999998753
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=2.2e-13 Score=119.44 Aligned_cols=235 Identities=14% Similarity=0.092 Sum_probs=156.7
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
..|.++.|++++..++... ++.++.|.- +.. ..+. .+......+.|++++.+++++..+ +.|.+||..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~-~~~~~~~~~~~~~~g~l~~~~~~~-----~~i~~~d~~ 74 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---EPW--LEIS-KKGLQLEGLNFDRQGQLFLLDVFE-----GNIFKINPE 74 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEE--EEEE-SSCCCEEEEEECTTSCEEEEETTT-----CEEEEECTT
T ss_pred cccceeeecCCccceeEEeecccCccccc---cee--EEEe-ccCccccCcEECCCCCEEEEECCC-----CEEEEEeCC
Confidence 3467788888887665544 777888831 111 2232 444556788888888877766655 899999998
Q ss_pred CCcEEEEEe-cCCceeEEEEeeCccEEE-e--C----CcEEEEEcCCCeEEEEEe--ccCCCeeEEEEecCCCeEEEEee
Q 017642 165 QSRCIGELS-FRSEVRSVKLRRDRIIVV-L--E----QKIFVYNFADLKLLHQIE--TIANPKGLCAVSQGVGSLVLVCP 234 (368)
Q Consensus 165 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~--d----~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~ 234 (368)
+++...... +...+.++++++++++++ . + +.|.+||.++++....+. .....+..++++++++. ++...
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~ 153 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGF-YFTDF 153 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCE-EEEEC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCE-EEEec
Confidence 887665553 667899999999998777 2 2 489999998776543332 23346788999999863 33321
Q ss_pred cC----CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEE-EEeCCCcEEEEEECCC-CceeEeeE-----eccCc
Q 017642 235 GL----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLA-TSSTKGTLVRIFNTLD-GTLLQEVR-----RGADR 303 (368)
Q Consensus 235 g~----~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~-s~~~dg~~i~iwd~~~-~~~~~~~~-----~~~~~ 303 (368)
.. ..+.|..++..+.....+..+...+..++|+|+|++|+ +.+.++. |.+||+.+ ++.+..+. .....
T Consensus 154 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~ 232 (333)
T 2dg1_A 154 RGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFTGH 232 (333)
T ss_dssp CCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECCSS
T ss_pred cccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecCCC
Confidence 10 12445555554444444444445678999999998654 4455677 99999864 44332211 10011
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 304 ~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
..+..++++++|+++++...++.|.+||.+
T Consensus 233 ~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 233 EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 367889999999988887788999999974
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.59 E-value=3.3e-13 Score=114.96 Aligned_cols=184 Identities=19% Similarity=0.142 Sum_probs=143.0
Q ss_pred eEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cC-CceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEeccC-CC
Q 017642 141 ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FR-SEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIA-NP 216 (368)
Q Consensus 141 ~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~~-~~ 216 (368)
+..+++++.+ +.|.+||.++|+.+.++. +. ..+.++.+.|+|++++ .++.|+.||. +++.+..+..+. ..
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 3445555655 999999998999999998 33 4789999999999888 6788999998 899999987643 46
Q ss_pred eeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeec------cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC
Q 017642 217 KGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 217 v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~------~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
+..+.+.++|+.++. . +..++.+..++.+++.+..+.. +......+++.++|++|++...++. |..||..
T Consensus 79 ~~~~~~~~dG~~lv~-~-~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~- 154 (276)
T 3no2_A 79 MQTARILPDGNALVA-W-CGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN- 154 (276)
T ss_dssp EEEEEECTTSCEEEE-E-ESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT-
T ss_pred ccccEECCCCCEEEE-e-cCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC-
Confidence 777889999985332 2 2125666667777776665542 2234556678999999999999999 9999987
Q ss_pred CceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q 017642 291 GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
|+.+.++... ..+.++.+.++|+++++++.++.|..+|.++++.
T Consensus 155 G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 155 GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCE
T ss_pred CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcE
Confidence 9999888762 3466788889999999888888899999887765
No 187
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.59 E-value=2.9e-13 Score=118.59 Aligned_cols=206 Identities=12% Similarity=0.102 Sum_probs=145.7
Q ss_pred eeEEEEEEeCCeEEEEecCCCCCC-------------------CCCcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCcc
Q 017642 130 IGVVEMLFRCNILALVGGGPDPQY-------------------PLNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRI 188 (368)
Q Consensus 130 ~~~~~~~~~~~~~~~~s~~~d~~~-------------------~~~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~ 188 (368)
..+..+++++++.++++...+..+ .++.|.+||..+++.+..+. +-.....++++++|.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 457788888888777766553110 11479999998999877765 335789999999998
Q ss_pred EEE---eCCcEEEEEcCCCe-EEEEEe---------ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeee
Q 017642 189 IVV---LEQKIFVYNFADLK-LLHQIE---------TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM 255 (368)
Q Consensus 189 ~l~---~d~~i~vwd~~~~~-~~~~~~---------~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~ 255 (368)
+++ .++.|++||..... .+..+. .+......+++++++..++++- +..++.|++|+.++..+..+.
T Consensus 104 l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d-~~~~~~I~~~~~~g~~~~~~~ 182 (329)
T 3fvz_A 104 YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSD-GYCNSRIVQFSPSGKFVTQWG 182 (329)
T ss_dssp EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEE-CSSCCEEEEECTTSCEEEEEC
T ss_pred EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEe-CCCCCeEEEEcCCCCEEEEec
Confidence 777 36799999975432 455552 2233567899999444444432 225788999888887776664
Q ss_pred cc----------CcceEEEEECCC-CCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE---
Q 017642 256 AH----------DSRIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS--- 321 (368)
Q Consensus 256 ~~----------~~~i~~v~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~--- 321 (368)
.. -.....|+++|+ +.++++...++. |++||..+++.+..+....+...+.+++|+| +..+++.
T Consensus 183 ~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~ 260 (329)
T 3fvz_A 183 EESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKP 260 (329)
T ss_dssp EECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCC
T ss_pred cCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCE
Confidence 32 234889999998 777777777888 9999998899988886544556788999999 4333333
Q ss_pred ----eCCCeEEEEEccCCCCC
Q 017642 322 ----SDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 322 ----s~dg~i~iwd~~~~~~~ 338 (368)
..+..|++|++.+++..
T Consensus 261 ~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp CTTCSCCCCEEEEETTTCCEE
T ss_pred EeccCCCcEEEEEEcCCCeEE
Confidence 34458999999887654
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.59 E-value=1.2e-13 Score=134.47 Aligned_cols=245 Identities=10% Similarity=0.024 Sum_probs=155.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeC--C----eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCC---
Q 017642 83 SPPPTLLHISFNQDHGCFAAGTD--H----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY--- 153 (368)
Q Consensus 83 ~h~~~v~~~~~s~~g~~l~~~~d--~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~--- 153 (368)
.|...+..++|||||++||.+.+ + .|++||+++++.... .+ +...+..+.|+++ ..++.+..+...
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~---~~~~~~~~~wspD-~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-EL---KWVKFSGLAWLGN-DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EE---EEEESCCCEESTT-SEEEEEECCCC----
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cC---CCceeccEEEECC-CEEEEEEecCccccc
Confidence 34446889999999999988762 2 399999987765321 11 2222246778887 544443332110
Q ss_pred ------CCCcEEEEeCCCCcE--EEEEe---cCCceeEEEEeeCccEEE---eC-----CcEEEEEcCCC--eEEEEEec
Q 017642 154 ------PLNKVMIWDDHQSRC--IGELS---FRSEVRSVKLRRDRIIVV---LE-----QKIFVYNFADL--KLLHQIET 212 (368)
Q Consensus 154 ------~~~~i~vwd~~~~~~--~~~~~---~~~~v~~~~~~~~~~~l~---~d-----~~i~vwd~~~~--~~~~~~~~ 212 (368)
....|++|++.++.. ...+. +...+..+.|+|||++++ .+ ..|++||+.++ ++...+..
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~ 314 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP 314 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC
Confidence 024599999987752 33333 223588999999998877 23 38999999877 31445544
Q ss_pred cCCCeeEEEEecCCCeEEEEeec-CCCCeEEEEecCc--ceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 213 IANPKGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYAS--KRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 213 ~~~~v~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~--~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
+...+... +.++++.+++.+.. ..++.|.+++... ..... +..+...+..+.|+ ++.++++...|+. .+||.+
T Consensus 315 ~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~ 391 (741)
T 1yr2_A 315 DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAF 391 (741)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEE
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEE
Confidence 44444444 45899887766421 1245677777655 23333 34455567778887 5667888888887 777755
Q ss_pred C-CCceeEeeEeccCcccEEEEEEecCCCEEEEE----eCCCeEEEEEccCCC
Q 017642 289 L-DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS----SDKGTVHVFNLKVNS 336 (368)
Q Consensus 289 ~-~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~----s~dg~i~iwd~~~~~ 336 (368)
. +++....+... +.+.+..+.++|+++.|+.. ...++|++||+.+++
T Consensus 392 ~~~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 392 DLDGKPAGAVSLP-GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ETTSCEEEECBCS-SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eCCCCceeeccCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4 46656555532 35678899999998865522 235789999998765
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.58 E-value=1.8e-11 Score=105.10 Aligned_cols=232 Identities=11% Similarity=0.005 Sum_probs=159.9
Q ss_pred CCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEe
Q 017642 84 PPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
+...+.++++.++|+++++.. ++.|.+|+.+ .. .....+. .....+..+.+++++.++++...+ +.|..||
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~ 84 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLP-TPDAKVMCLTISSDGEVWFTENAA-----NKIGRIT 84 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECS-STTCCEEEEEECTTSCEEEEETTT-----TEEEEEC
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCC-cccCceeeEEECCCCCEEEeCCCC-----CeEEEEC
Confidence 446799999999999877766 6779999976 33 2222221 344567888898887777766544 7899999
Q ss_pred CCCCcEEEEEe---cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEE-eccCCCeeEEEEecCCCeEEEEeec
Q 017642 163 DHQSRCIGELS---FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 163 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
.. ++. ..+. ....+..+++.+++.+++ .++.|.+||. +++..... ......+..+++.+++. ++++ .
T Consensus 85 ~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~--~ 158 (299)
T 2z2n_A 85 KK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFT--E 158 (299)
T ss_dssp TT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEE--E
T ss_pred CC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEE--e
Confidence 76 432 3333 345789999999988777 2578999998 55543322 22344577888988885 3433 3
Q ss_pred CCCCeEEEEecCcceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecC
Q 017642 236 LQKGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSN 314 (368)
Q Consensus 236 ~~dg~i~i~~~~~~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~ 314 (368)
..++.|..++.+++.... +..+...+..++++++|+++++...++. |.+||. +++.. .+....+...+.+++++++
T Consensus 159 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 159 NQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEIT-EFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEE-EEECSSTTCCEEEEEECST
T ss_pred CCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEE-EEECCCCCCCceeEEECCC
Confidence 345778776664433322 2334456889999999997777666777 999998 66643 3332223457899999999
Q ss_pred CCEEEEEeCCCeEEEEEc
Q 017642 315 AQWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 315 ~~~l~s~s~dg~i~iwd~ 332 (368)
|+++++...++.|.+||.
T Consensus 236 g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCEEEEETTTTEEEEEET
T ss_pred CCEEEeccCCceEEEECC
Confidence 997776667788999997
No 190
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.57 E-value=6.5e-12 Score=108.30 Aligned_cols=220 Identities=10% Similarity=-0.005 Sum_probs=148.7
Q ss_pred CCCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEe
Q 017642 85 PPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
..-..+..|++++..|...+ .+.|..|+.++.... .+ .....+..+.+++++.++++.. +.|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~--~~~~~~~~i~~~~dG~l~v~~~-------~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ---RV--TMDAPVSSVALRQSGGYVATIG-------TKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE---EE--ECSSCEEEEEEBTTSSEEEEET-------TEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE---EE--eCCCceEEEEECCCCCEEEEEC-------CeEEEEE
Confidence 34556789999766554444 667999998765432 22 2234577888888887666653 6899999
Q ss_pred CCCCcEEEEEec-----CCceeEEEEeeCccEEEeC------------CcEEEEEcC-CCeEEEEEeccCCCeeEEEEec
Q 017642 163 DHQSRCIGELSF-----RSEVRSVKLRRDRIIVVLE------------QKIFVYNFA-DLKLLHQIETIANPKGLCAVSQ 224 (368)
Q Consensus 163 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~d------------~~i~vwd~~-~~~~~~~~~~~~~~v~~~~~~~ 224 (368)
..+++....... ...+..++++++|++++.+ ....||.+. .++... +.........++|++
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSL 158 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECT
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcC
Confidence 988765443332 2347889999999977721 234555554 244333 222333456799999
Q ss_pred CCCeEEEEeecCCCCeEEEEecC---cc-----eeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEe
Q 017642 225 GVGSLVLVCPGLQKGQVRVEHYA---SK-----RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQE 296 (368)
Q Consensus 225 ~~~~~~l~~~g~~dg~i~i~~~~---~~-----~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~ 296 (368)
+++.++++- +.++.|.+++.+ +. ....+..+...+..++++++|++.++...++. |.+||..+++.+..
T Consensus 159 dg~~lyv~~--~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 159 DHKIFYYID--SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQT 235 (297)
T ss_dssp TSCEEEEEE--GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEEE
T ss_pred CCCEEEEec--CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEEE
Confidence 999766553 456788886542 21 11223334456889999999998887777788 99999988999888
Q ss_pred eEeccCcccEEEEEEe-cCCCEEEEEe
Q 017642 297 VRRGADRAEIYSLAFS-SNAQWLAVSS 322 (368)
Q Consensus 297 ~~~~~~~~~v~~l~~s-p~~~~l~s~s 322 (368)
+.. ....+++++|. ||++.|+.++
T Consensus 236 i~~--p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 236 VKL--PVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEC--SSSBEEEEEEESGGGCEEEEEE
T ss_pred EEC--CCCCceEEEEeCCCCCEEEEEc
Confidence 876 44579999998 8888766554
No 191
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=4.3e-12 Score=118.55 Aligned_cols=242 Identities=12% Similarity=0.020 Sum_probs=161.1
Q ss_pred CEEEEEEcCCCCEEEEEe-CCeEEEEEec--CCCcceEEEcccCCceeEEEEEEe----CCeEEE-EecCCCCCCCCCcE
Q 017642 87 TLLHISFNQDHGCFAAGT-DHGFRIYNCD--PFREIFRRDFERGGGIGVVEMLFR----CNILAL-VGGGPDPQYPLNKV 158 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~s~~~d~~~~~~~i 158 (368)
.+..+.|+|||+++++++ ++.|.+||+. +.+.. ..+. . ......+.++ +++..+ ++...+ +.|
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v--~~i~-~-G~~P~~ia~s~~~~pDGk~l~v~n~~~-----~~v 268 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV--AEIK-I-GSEARSIETSKMEGWEDKYAIAGAYWP-----PQY 268 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE--EEEE-C-CSEEEEEEECCSTTCTTTEEEEEEEET-----TEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe--EEEe-c-CCCCceeEEccccCCCCCEEEEEEccC-----CeE
Confidence 567899999999998888 7789999985 44433 4443 2 2345678888 466443 343333 889
Q ss_pred EEEeCCCCcEEEEEecC--------------------------------------------------------CceeEEE
Q 017642 159 MIWDDHQSRCIGELSFR--------------------------------------------------------SEVRSVK 182 (368)
Q Consensus 159 ~vwd~~~~~~~~~~~~~--------------------------------------------------------~~v~~~~ 182 (368)
.++|..+.+.+..+... ....++.
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~ 348 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 348 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCce
Confidence 99998888777665410 1123567
Q ss_pred EeeCccEEE----eCCcEEEEEcCCCeEEEEEec-cCCCe--eEEE-EecCCCeEEEEeecCCCCeEEEEecC-------
Q 017642 183 LRRDRIIVV----LEQKIFVYNFADLKLLHQIET-IANPK--GLCA-VSQGVGSLVLVCPGLQKGQVRVEHYA------- 247 (368)
Q Consensus 183 ~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~-~~~~v--~~~~-~~~~~~~~~l~~~g~~dg~i~i~~~~------- 247 (368)
|++++++++ .++.|.++|+.+++.+..+.. ...+- .... ++|++..+++ ++...++.|.+++..
T Consensus 349 ~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~-t~~~g~~~Vsvid~~~~~~~~~ 427 (567)
T 1qks_A 349 LDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWA-TSHMGDDSVALIGTDPEGHPDN 427 (567)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEE-EEBSSSSEEEEEECCTTTCTTT
T ss_pred ECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEE-eCCCCCCeEEEecCCCCCCccc
Confidence 899998876 468999999999998877754 22221 1223 5777665443 323346889886554
Q ss_pred -cceeeeeeccCcceEEEEECCCCCEEEEEeC-------CCcEEEEEECCCC-----cee-EeeEe------ccCcccEE
Q 017642 248 -SKRTKFIMAHDSRIACFALTQDGQLLATSST-------KGTLVRIFNTLDG-----TLL-QEVRR------GADRAEIY 307 (368)
Q Consensus 248 -~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~-------dg~~i~iwd~~~~-----~~~-~~~~~------~~~~~~v~ 307 (368)
.+.++.+......-..|..+|++++|.+... .+. |.|+|+.+. ... ..+.. ......+.
T Consensus 428 ~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~-v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 428 AWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGS-VAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp BTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTC-EEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred cCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCce-EEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 3455666654444355778999998888663 347 999999876 211 22221 00134689
Q ss_pred EEEEecCCCEEEEEe-----CCCeEEEEEccCCCCCC
Q 017642 308 SLAFSSNAQWLAVSS-----DKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 308 ~l~~sp~~~~l~s~s-----~dg~i~iwd~~~~~~~~ 339 (368)
.+.|+++|+.+..+. .++.|.|+|.++.+...
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 999999999877653 37899999999887543
No 192
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.56 E-value=2.4e-12 Score=110.23 Aligned_cols=194 Identities=12% Similarity=0.130 Sum_probs=143.1
Q ss_pred CceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEec-------CCceeEEEEe-eCccEEE-e---CCc
Q 017642 128 GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF-------RSEVRSVKLR-RDRIIVV-L---EQK 195 (368)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~-------~~~v~~~~~~-~~~~~l~-~---d~~ 195 (368)
+-.....+++++++.++++...+ +.|.+||.. ++.+..+.. ...+..+++. +++.+++ . ++.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~-----~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNN-----HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGG-----TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred ccCCCceEEECCCCCEEEEECCC-----CEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 33456788888887777775555 899999976 666666642 2468899994 7777766 2 689
Q ss_pred EEEEEcCCCeEEEEEec-cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeee--ccCcceEEEEECCCCCE
Q 017642 196 IFVYNFADLKLLHQIET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM--AHDSRIACFALTQDGQL 272 (368)
Q Consensus 196 i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~--~~~~~i~~v~~sp~g~~ 272 (368)
|++|| .+++.+..+.. +......+++.++++ ++++ ...++.|.+|+.+++.+..+. .+...+..|+++++|++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~--~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l 177 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVV--ECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEI 177 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEE--ETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEE--ECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCE
Confidence 99999 67777776643 334577899999986 3433 345788999887777666554 34456899999999998
Q ss_pred EEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCC-eEEEEEcc
Q 017642 273 LATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG-TVHVFNLK 333 (368)
Q Consensus 273 l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg-~i~iwd~~ 333 (368)
+++...++. |++||. +++.+..+....+...+..|+++++|+++++...++ .|++||.+
T Consensus 178 ~v~~~~~~~-i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 178 FISDNRAHC-VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEEGGGTE-EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEEECCCCE-EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 888777888 999996 566666665321235689999999999888887775 99999953
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.56 E-value=4.7e-12 Score=114.11 Aligned_cols=236 Identities=10% Similarity=0.089 Sum_probs=156.9
Q ss_pred CCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
-.....|+|+++|+++++.. ++.|++||.+....... .. ..... . +++++++..++.+..+ ....|.+|+.
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~--~~-~~~~~-~-ia~~~~g~~l~~~d~~---~~~~I~~~d~ 201 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV--HP-GFKGG-K-PAVTKDKQRVYSIGWE---GTHTVYVYMK 201 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE--EE-TCCBC-B-CEECTTSSEEEEEBSS---TTCEEEEEEG
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe--ec-cCCCC-c-eeEecCCCcEEEEecC---CCceEEEEEc
Confidence 34688999999999777666 56799999876544322 21 22222 2 6777776544444332 0027999998
Q ss_pred CCCcEEEEE----e-cCCceeEEEEee-CccEEE--eCCcEEEEEcCCCeEEEE----EeccCCCe--eEEEEecCCCeE
Q 017642 164 HQSRCIGEL----S-FRSEVRSVKLRR-DRIIVV--LEQKIFVYNFADLKLLHQ----IETIANPK--GLCAVSQGVGSL 229 (368)
Q Consensus 164 ~~~~~~~~~----~-~~~~v~~~~~~~-~~~~l~--~d~~i~vwd~~~~~~~~~----~~~~~~~v--~~~~~~~~~~~~ 229 (368)
..+.....+ . ....+.+++++| ++.+++ .++.|+.||..++..... ..+..... ..++|++++..+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 766554444 2 446788999999 666666 457899999987653322 11122222 289999977766
Q ss_pred EEEeecCCCCeEEEEecCcceeeeeeccC---------------cceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCce
Q 017642 230 VLVCPGLQKGQVRVEHYASKRTKFIMAHD---------------SRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTL 293 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~~~~~~~~~~~---------------~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~ 293 (368)
+++ ...++.|+.++.++. +..+.++. .....++++++|+++++-. .++. |+.||+.+++.
T Consensus 282 yv~--d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v 357 (409)
T 3hrp_A 282 YMS--DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYV 357 (409)
T ss_dssp EEE--ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEE
T ss_pred EEE--eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEE
Confidence 654 345778888877765 33333322 3478999999999777776 7777 99999877764
Q ss_pred eEeeEecc-------------CcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 294 LQEVRRGA-------------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 294 ~~~~~~~~-------------~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
. .+.+.. .-.....|+++++|.++++-..++.|+.++++
T Consensus 358 ~-~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 358 S-TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp E-EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred E-EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 3 444310 01358899999998888888888899988763
No 194
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=6.5e-12 Score=117.39 Aligned_cols=227 Identities=13% Similarity=0.104 Sum_probs=157.8
Q ss_pred CCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC--CCcEEEE
Q 017642 95 QDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH--QSRCIGE 171 (368)
Q Consensus 95 ~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~--~~~~~~~ 171 (368)
+.+.++++.. ++.|.++|..+.+... .+. .......+.+++++.+++.++.+ +.|.+||+. +++.+.+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~--~i~--~g~~p~~v~~SpDGr~lyv~~~d-----g~V~viD~~~~t~~~v~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKT--VLD--TGYAVHISRLSASGRYLFVIGRD-----GKVNMIDLWMKEPTTVAE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEE--EEE--CSSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCCEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEE--EEe--CCCCccceEECCCCCEEEEEcCC-----CeEEEEECCCCCCcEeEE
Confidence 3334445544 6779999988776653 332 22234478899988776666666 899999996 8888888
Q ss_pred EecCCceeEEEEe----eCccEEE----eCCcEEEEEcCCCeEEEEEeccC-----------CCeeEEEEecCCCeEEEE
Q 017642 172 LSFRSEVRSVKLR----RDRIIVV----LEQKIFVYNFADLKLLHQIETIA-----------NPKGLCAVSQGVGSLVLV 232 (368)
Q Consensus 172 ~~~~~~v~~~~~~----~~~~~l~----~d~~i~vwd~~~~~~~~~~~~~~-----------~~v~~~~~~~~~~~~~l~ 232 (368)
+........++|+ |||++++ .++.|.++|..+.+.+..+.... ..+..+..++++..+++.
T Consensus 236 i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 236 IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred EecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 8866678899999 6998877 57999999999999888775321 145677788887764444
Q ss_pred eecCCCCeEEEEecCcc-e--eeeeeccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEe-c--cCccc
Q 017642 233 CPGLQKGQVRVEHYASK-R--TKFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRR-G--ADRAE 305 (368)
Q Consensus 233 ~~g~~dg~i~i~~~~~~-~--~~~~~~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~-~--~~~~~ 305 (368)
. ..+|.|.+.+.... . +..+ ........+.|+|+|+++++++. ++. |.++|+.+++.+..+.. + .|.+.
T Consensus 316 ~--~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~i~vgg~~Phpg~ 391 (567)
T 1qks_A 316 V--KETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAIEDTGGQTPHPGR 391 (567)
T ss_dssp E--TTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSSBCCTT
T ss_pred e--cCCCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEEEeccCcCCCCcc
Confidence 3 46788888655432 1 1222 23345678899999998776664 566 99999999998877765 3 23322
Q ss_pred EEEEEEecCCCEE-EEEe-CCCeEEEEEccCC
Q 017642 306 IYSLAFSSNAQWL-AVSS-DKGTVHVFNLKVN 335 (368)
Q Consensus 306 v~~l~~sp~~~~l-~s~s-~dg~i~iwd~~~~ 335 (368)
-..+ ++|++..+ ++.. .+++|.++|..+.
T Consensus 392 g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 392 GANF-VHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred ceee-ECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 2222 57875544 4443 4689999999873
No 195
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.55 E-value=2.4e-12 Score=124.65 Aligned_cols=240 Identities=8% Similarity=-0.029 Sum_probs=151.7
Q ss_pred CCCCEEEEEe-CCe---EEEEEecCCCcceEEE-----cccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 95 QDHGCFAAGT-DHG---FRIYNCDPFREIFRRD-----FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 95 ~~g~~l~~~~-d~~---i~iw~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
|+|++++... +.+ -.+|..+......... +...+...+..+.|+|++..++.+..+.......|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 7888877655 322 2456554322211111 112344567788999998776643322000012899999999
Q ss_pred CcEEEEEecCCceeEEEEeeCccEEE---eCCc----------------EEEEEcCCCeE--EEEEec--cCCCeeEEEE
Q 017642 166 SRCIGELSFRSEVRSVKLRRDRIIVV---LEQK----------------IFVYNFADLKL--LHQIET--IANPKGLCAV 222 (368)
Q Consensus 166 ~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~----------------i~vwd~~~~~~--~~~~~~--~~~~v~~~~~ 222 (368)
++.+........+..++|+|||+.++ .++. |++|++.+++. ...+.. +...+..+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 98776443333477899999998877 3433 99999987652 222232 3344678999
Q ss_pred ecCCCeEEEEeecCC--CCeEEEEecCc------c--eeeeeeccCcceEEEEECCCCCEEEEEeC----CCcEEEEEEC
Q 017642 223 SQGVGSLVLVCPGLQ--KGQVRVEHYAS------K--RTKFIMAHDSRIACFALTQDGQLLATSST----KGTLVRIFNT 288 (368)
Q Consensus 223 ~~~~~~~~l~~~g~~--dg~i~i~~~~~------~--~~~~~~~~~~~i~~v~~sp~g~~l~s~~~----dg~~i~iwd~ 288 (368)
+|||+.+++...... +..|++++... . ....+..+...+.. .|+++|+.|+..+. ++. |.+||+
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~-l~~~d~ 318 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR-LINIDF 318 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE-EEEEET
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE-EEEEeC
Confidence 999998666542122 56788877654 2 45566666666655 48889987766554 235 999999
Q ss_pred CCCc--eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCe--EEEEEccCCC
Q 017642 289 LDGT--LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGT--VHVFNLKVNS 336 (368)
Q Consensus 289 ~~~~--~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~--i~iwd~~~~~ 336 (368)
.+++ ....+..+.....+..++|++++.++++...|+. |++|++.+++
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 8764 2344544212236888999988888888888885 5566765554
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.54 E-value=1.2e-12 Score=126.48 Aligned_cols=231 Identities=9% Similarity=-0.009 Sum_probs=147.2
Q ss_pred CCCCEEEEEe-CCe---EEEEEecCCCcceEEEcc-----cCCceeEEEEEEeCCeEEEE-----ecCCCCCCCCCcEEE
Q 017642 95 QDHGCFAAGT-DHG---FRIYNCDPFREIFRRDFE-----RGGGIGVVEMLFRCNILALV-----GGGPDPQYPLNKVMI 160 (368)
Q Consensus 95 ~~g~~l~~~~-d~~---i~iw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----s~~~d~~~~~~~i~v 160 (368)
|+|++++... +++ -.||............+. .++...+..+.|+|++..++ +++.+ ..|++
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~-----~~i~v 151 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE-----AVLHV 151 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC-----CEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce-----EEEEE
Confidence 7888887666 332 455655432222222221 13445688899999988877 45444 78999
Q ss_pred EeCCCCcEE-EEEecCCceeEEEEeeCccEEE---eCCc-------------EEEEEcCCCe----EEEEEeccCCCeeE
Q 017642 161 WDDHQSRCI-GELSFRSEVRSVKLRRDRIIVV---LEQK-------------IFVYNFADLK----LLHQIETIANPKGL 219 (368)
Q Consensus 161 wd~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~---~d~~-------------i~vwd~~~~~----~~~~~~~~~~~v~~ 219 (368)
||+.+++.+ ...........++|+|||+.++ .|.. |++|++.+++ ++.....+...+..
T Consensus 152 ~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 152 IDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp EETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred EECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 999999864 2111112226899999998887 3444 9999998775 22222234456778
Q ss_pred EEEecCCCeEEEEeecC-CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe---CCCcEEEEEECCCCce--
Q 017642 220 CAVSQGVGSLVLVCPGL-QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS---TKGTLVRIFNTLDGTL-- 293 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~-~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~---~dg~~i~iwd~~~~~~-- 293 (368)
+.|++||+.+++..... ....|.+++........+..+...+....+ ++|.+++... .++. |.+||+.+++.
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~-l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQR-VFEVDPAKPARAS 309 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCE-EEEEBTTBCSGGG
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCE-EEEEeCCCCCccC
Confidence 99999999866544211 112455555444455666666666677767 5666444443 2467 99999987753
Q ss_pred eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 294 LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 294 ~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
...+..+.....+..++|+ ++.++++...|+..+||.+.
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 2344432124568889998 77788888899998888776
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.53 E-value=2.1e-11 Score=108.43 Aligned_cols=236 Identities=11% Similarity=-0.003 Sum_probs=154.2
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEEecCCCcceEEEcc-cC---CceeEEEEEEeCCeEEEEecCCCCCCC
Q 017642 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFE-RG---GGIGVVEMLFRCNILALVGGGPDPQYP 154 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~s~~~d~~~~ 154 (368)
.++|+|||++|+++. ++.|.+||..+.+......+. .. ....-..+.+++++..++.++.. .
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---A 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC---C
Confidence 789999999998874 456999998876655333321 00 01223467888887766654321 0
Q ss_pred CCcEEEEeCCCCcEEEE-EecCCceeEEEEeeCcc--EEE--eCCcEEEEEcCCCeEEEEEe-----ccCCCe-eEEEEe
Q 017642 155 LNKVMIWDDHQSRCIGE-LSFRSEVRSVKLRRDRI--IVV--LEQKIFVYNFADLKLLHQIE-----TIANPK-GLCAVS 223 (368)
Q Consensus 155 ~~~i~vwd~~~~~~~~~-~~~~~~v~~~~~~~~~~--~l~--~d~~i~vwd~~~~~~~~~~~-----~~~~~v-~~~~~~ 223 (368)
++.|.++| .+++.+.+ +..... +.+.+++. ++. .||.+.++|. +++...... ....++ ....+.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 17899999 99998888 764433 44555543 222 6899999999 887663322 111121 224566
Q ss_pred cCCCeEEEEeecCCCCeEEEEecCcce---eeeeec----------cCcceEEEEECCCCCEEEEEeC----------CC
Q 017642 224 QGVGSLVLVCPGLQKGQVRVEHYASKR---TKFIMA----------HDSRIACFALTQDGQLLATSST----------KG 280 (368)
Q Consensus 224 ~~~~~~~l~~~g~~dg~i~i~~~~~~~---~~~~~~----------~~~~i~~v~~sp~g~~l~s~~~----------dg 280 (368)
+++..++++. ..+.+.+.+..... +..+.. .......++++++++.|+++.. .+
T Consensus 222 ~~~~~~~~~~---~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 222 NKSGRIVWPV---YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred ecCCEEEEEc---CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 6766655443 45677774443321 112211 1122445789999997777643 34
Q ss_pred cEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC-EEEEEe-CCCeEEEEEccCCCCCCC
Q 017642 281 TLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSS-DKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 281 ~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~s-~dg~i~iwd~~~~~~~~~ 340 (368)
. |.++|+.+++.+..+..+ ....+++|+|||+ +++++. .++.|.+||+.+++....
T Consensus 299 ~-V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 299 E-VTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred e-EEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 6 999999999999988753 3689999999999 777776 589999999999887654
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=1.3e-10 Score=99.81 Aligned_cols=233 Identities=11% Similarity=-0.005 Sum_probs=156.0
Q ss_pred CCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
...+.++++.++|.++++.. ++.|..|+.+ .......+. .....+..+.+++++.++++...+ +.|.+||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~ 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK--GIIKEYTLP-NPDSAPYGITEGPNGDIWFTEMNG-----NRIGRITD 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEECS-STTCCEEEEEECTTSCEEEEETTT-----TEEEEECT
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC--CcEEEEeCC-CcCCCceeeEECCCCCEEEEecCC-----ceEEEECC
Confidence 35789999999999887776 6779999865 222122221 244567788888877766665544 78999998
Q ss_pred CCCcEEEEE-e-cCCceeEEEEeeCccEEE-e--CCcEEEEEcCCCeEEEE-EeccCCCeeEEEEecCCCeEEEEeecCC
Q 017642 164 HQSRCIGEL-S-FRSEVRSVKLRRDRIIVV-L--EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 164 ~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~-~--d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
+++..... . ....+..+++.+++.+.+ . ++.|.+||. +++.... +.........+++.+++. ++++ ...
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~--~~~ 202 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFV--EII 202 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEE--ETT
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEE--ccC
Confidence 55544322 2 346789999999988777 2 578999998 6665433 222344567788988876 3443 234
Q ss_pred CCeEEEEecCcceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC
Q 017642 238 KGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (368)
Q Consensus 238 dg~i~i~~~~~~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~ 316 (368)
++.|.+++.++..... ...+...+.+++++++|+++++...++. |.+||. +++ +..+....+...+.++++ ++|.
T Consensus 203 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~ 278 (299)
T 2z2n_A 203 GNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGET 278 (299)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSC
T ss_pred CceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc-eEEEeCCCCCCccceEEe-cCCC
Confidence 6778877664433221 2334567899999999997766656777 999998 454 334432223457899999 8888
Q ss_pred EEEEEeCCCeEEEEEccCC
Q 017642 317 WLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 317 ~l~s~s~dg~i~iwd~~~~ 335 (368)
++++.. .+.|..++.+++
T Consensus 279 l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 279 IWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp EEEEET-TTEEEEEEEC--
T ss_pred EEEEec-CCcEEEEEcCcc
Confidence 777655 567888887654
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.49 E-value=4.6e-12 Score=122.23 Aligned_cols=245 Identities=10% Similarity=0.075 Sum_probs=152.4
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-----C-CeEEEEEecCCCcceEEEcccCCceeEEEEEEe-CCeEEEEecCCCC---
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-----D-HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR-CNILALVGGGPDP--- 151 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-----d-~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~d~--- 151 (368)
..|...+..++|||||++||.+. + ..|++||+++++.... .+. ......+.|+ .+.+++.+.....
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~---~~k~~~~~WsDg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLK---DVKFSGISWLGNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEE---EEESCCCEEETTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccC---CceeccEEEeCCCEEEEEEecCccccc
Confidence 34666788999999999998654 1 2399999988764322 221 1111234454 4444444432100
Q ss_pred ---CCCCCcEEEEeCCCCcE--EEEEec----CCceeEEEEeeCccEEE---e----CCcEEEEEcCCCe-EEEEEeccC
Q 017642 152 ---QYPLNKVMIWDDHQSRC--IGELSF----RSEVRSVKLRRDRIIVV---L----EQKIFVYNFADLK-LLHQIETIA 214 (368)
Q Consensus 152 ---~~~~~~i~vwd~~~~~~--~~~~~~----~~~v~~~~~~~~~~~l~---~----d~~i~vwd~~~~~-~~~~~~~~~ 214 (368)
......|++|++.++.. ...+.. ...+..+.++|||++++ . ...|+++|+.++. ....+..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 01125699999987643 333332 23478899999999886 1 2589999997763 344555555
Q ss_pred CCeeEEEEecCCCeEEEEeecC-CCCeEEEEecCccee---eeeeccCcceEEEEECCCCCEEEEEeCCC---cEEEEEE
Q 017642 215 NPKGLCAVSQGVGSLVLVCPGL-QKGQVRVEHYASKRT---KFIMAHDSRIACFALTQDGQLLATSSTKG---TLVRIFN 287 (368)
Q Consensus 215 ~~v~~~~~~~~~~~~~l~~~g~-~dg~i~i~~~~~~~~---~~~~~~~~~i~~v~~sp~g~~l~s~~~dg---~~i~iwd 287 (368)
...... ++++++.+++.+... ..+.|..++...... ..+..|...+. .|++++++|+....++ . |++||
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~-l~~~d 356 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR-VEQFD 356 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE-EEEEC
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE-EEEEE
Confidence 444443 778888876654211 135666666654332 45666665555 8889998777665544 5 89999
Q ss_pred CCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCC----CeEEEEEccCCC
Q 017642 288 TLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK----GTVHVFNLKVNS 336 (368)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~d----g~i~iwd~~~~~ 336 (368)
+..+ ....+... ..+.+..+.++++++.|+....+ ++|+.||+.+++
T Consensus 357 ~~g~-~~~~l~~p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 357 YEGK-RVREVALP-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTSC-EEEEECCS-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCCC-eeEEeecC-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 8744 44454432 34567788888888866655433 789999987764
No 200
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.47 E-value=2.2e-10 Score=100.09 Aligned_cols=216 Identities=10% Similarity=0.021 Sum_probs=144.0
Q ss_pred CEEEEEEcCCCCEE-EEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 87 TLLHISFNQDHGCF-AAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 87 ~v~~~~~s~~g~~l-~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
-..+..|++++..+ +++. ++.|.+|+.++++.. .+. ....+.++.+++++.++++.. ..|.+||..
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~---~~~--~~~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~ 117 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT---VHA--LPFMGSALAKISDSKQLIASD-------DGLFLRDTA 117 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE---EEE--CSSCEEEEEEEETTEEEEEET-------TEEEEEETT
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE---EEE--CCCcceEEEEeCCCeEEEEEC-------CCEEEEECC
Confidence 45678999986544 5554 667999997754332 221 234577788888877777653 459999998
Q ss_pred CCcEEEEEec-----CCceeEEEEeeCccEEEeC---------CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEE
Q 017642 165 QSRCIGELSF-----RSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 165 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~d---------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (368)
+++....... ...+.+++++++|++++.+ +.|+.+| +++... +.........++|+++++.++
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i~~s~dg~~ly 194 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSICFSPDGTTGY 194 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEEEECTTSCEEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCeEEcCCCCEEE
Confidence 8875433322 2358899999999877721 3566666 565433 322333456799999998766
Q ss_pred EEeecCCCCeEEEEecC---c-ce-----eeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc
Q 017642 231 LVCPGLQKGQVRVEHYA---S-KR-----TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA 301 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~---~-~~-----~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~ 301 (368)
++ ...++.|.+++.. + .. ...+......+..++++++|+++++...++. |.+||. +++.+..+..
T Consensus 195 v~--~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~-- 268 (326)
T 2ghs_A 195 FV--DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEV-- 268 (326)
T ss_dssp EE--ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEEC--
T ss_pred EE--ECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEEC--
Confidence 54 3456788887653 2 11 1122223456788999999997777766777 999997 6777777765
Q ss_pred CcccEEEEEEe-cCCCEEEEEeC
Q 017642 302 DRAEIYSLAFS-SNAQWLAVSSD 323 (368)
Q Consensus 302 ~~~~v~~l~~s-p~~~~l~s~s~ 323 (368)
....+.+++|+ ++++.|+.++.
T Consensus 269 ~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 269 PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp SCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCCCcEEEEEecCCCCEEEEEec
Confidence 44579999998 88887755543
No 201
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.46 E-value=1.5e-11 Score=109.13 Aligned_cols=215 Identities=11% Similarity=0.097 Sum_probs=137.1
Q ss_pred CCEEEEEEcCCCCEEEEEe---CCeEEEEEecCCCcceEEE-cccCCceeEEEEEEeCCe-EEEEecCCCCCCCCCcEEE
Q 017642 86 PTLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRD-FERGGGIGVVEMLFRCNI-LALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~~~~i~v 160 (368)
.....++|+|||++|+++. ++.|.+||+++.+.. .. +..... ..+.+.+.+ ..+++.+.| |.+.+
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~--~~~i~~~~~---~~v~~~p~~~~~~~~~~~d-----g~~~~ 177 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYV--EDVTAAAGC---WSVIPQPNRPRSFMTICGD-----GGLLT 177 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEE--EEEGGGTTE---EEEEECTTSSSEEEEEETT-----SSEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEE--EEEecCCCc---ceeEEcCCCCeeEEEECCC-----CcEEE
Confidence 3456789999999998876 356999999876543 44 431221 112334432 333444444 88999
Q ss_pred EeCCC-CcEEEEE------ecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCe--EEEEEecc----------CCCee
Q 017642 161 WDDHQ-SRCIGEL------SFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLK--LLHQIETI----------ANPKG 218 (368)
Q Consensus 161 wd~~~-~~~~~~~------~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~--~~~~~~~~----------~~~v~ 218 (368)
|+... ++..... ........+.+++++..++ .++.|+++|+.... ....+... .....
T Consensus 178 v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 257 (361)
T 2oiz_A 178 INLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYN 257 (361)
T ss_dssp EEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSS
T ss_pred EEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCee
Confidence 98765 5544221 1111112333456654443 57889999986543 22222110 01122
Q ss_pred EEEEecCCCeEEEEee-cC-------CCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECC
Q 017642 219 LCAVSQGVGSLVLVCP-GL-------QKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (368)
Q Consensus 219 ~~~~~~~~~~~~l~~~-g~-------~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (368)
.++++++++.++++.. .. ..+.|.+|+.. .+.+..+..+. +.+|+|+|||++|++++. +. |.|||+.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~-v~v~D~~ 333 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GN-VNVYDIS 333 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SC-EEEEECS
T ss_pred EEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-Ce-EEEEECC
Confidence 3789999998777642 01 13478886654 46666677766 899999999999998887 88 9999999
Q ss_pred CC--ceeEeeEeccCcccEEEEEEecCCC
Q 017642 290 DG--TLLQEVRRGADRAEIYSLAFSSNAQ 316 (368)
Q Consensus 290 ~~--~~~~~~~~~~~~~~v~~l~~sp~~~ 316 (368)
++ +.+..+.. .......++++|+|+
T Consensus 334 t~~l~~~~~i~~--~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 334 QPEPKLLRTIEG--AAEASLQVQFHPVGG 360 (361)
T ss_dssp SSSCEEEEEETT--SCSSEEEEEECCCSC
T ss_pred CCcceeeEEecc--CCCCcEEEEecCCCC
Confidence 99 88887643 345678899999986
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=6e-10 Score=95.58 Aligned_cols=231 Identities=9% Similarity=-0.009 Sum_probs=158.8
Q ss_pred CCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
...+.++++.++|+++++.. ++.|.+|+.+ .+.. ...+. .....+..+.+++++.++++...+ +.|..||.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~v~~~d~ 90 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVP-TPDAKVMCLIVSSLGDIWFTENGA-----NKIGKLSK 90 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECS-STTCCEEEEEECTTSCEEEEETTT-----TEEEEECT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECC-CCCCcceeEEECCCCCEEEEecCC-----CeEEEECC
Confidence 45788999999999887775 6789999876 3322 22232 334567788888877766665544 78999997
Q ss_pred CCCcEEEEEe---cCCceeEEEEeeCccEEE-e--CCcEEEEEcCCCeEEEE-EeccCCCeeEEEEecCCCeEEEEeecC
Q 017642 164 HQSRCIGELS---FRSEVRSVKLRRDRIIVV-L--EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 164 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~-~--d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
. ++.. .+. ....+.++++.+++.+.+ . ++.|..||.. ++.... +.........+++.++++ ++++. .
T Consensus 91 ~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~--~ 164 (300)
T 2qc5_A 91 K-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTE--N 164 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEE--T
T ss_pred C-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEe--c
Confidence 7 6543 333 346789999999988777 2 6789999987 654422 222344567888988887 44432 3
Q ss_pred CCCeEEEEecCcceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCC
Q 017642 237 QKGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNA 315 (368)
Q Consensus 237 ~dg~i~i~~~~~~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~ 315 (368)
.++.|..++.++..... ...+...+..++++++|+++++....+. |.+||. +++... +........+.+++++++|
T Consensus 165 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 165 QNNSIGRITNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISE-YDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEECSTT
T ss_pred CCCeEEEECCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEE-EECCCCCCCceEEEECCCC
Confidence 45677776665443321 2234456899999999987777666777 999997 555443 2221134568999999999
Q ss_pred CEEEEEeCCCeEEEEEc
Q 017642 316 QWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 316 ~~l~s~s~dg~i~iwd~ 332 (368)
+++++...++.|..||.
T Consensus 242 ~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 242 EIWFTEWGANQIGRITN 258 (300)
T ss_dssp CEEEEETTTTEEEEECT
T ss_pred CEEEeccCCCeEEEECC
Confidence 97777666788999987
No 203
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.43 E-value=3.7e-11 Score=103.42 Aligned_cols=192 Identities=10% Similarity=0.038 Sum_probs=132.7
Q ss_pred CceeEEEEEEeCCeE-EEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE-e--CCcEEEEEcC
Q 017642 128 GGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-L--EQKIFVYNFA 202 (368)
Q Consensus 128 ~~~~~~~~~~~~~~~-~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~--d~~i~vwd~~ 202 (368)
+......+.|++++. +++++..+ +.|..||..++ ...+. +...+.+++++++|.+++ . ++.|.+||..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~-----~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQ-----NRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred CCccccCCeEeCCCCEEEEEeCCC-----CEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 344456788888775 45554444 89999998877 55555 677899999999998877 2 4689999998
Q ss_pred CCeEEEEEecc----CCCeeEEEEecCCCeEEEEee--cC-------------CCCeEEEEecCcceeeeeeccCcceEE
Q 017642 203 DLKLLHQIETI----ANPKGLCAVSQGVGSLVLVCP--GL-------------QKGQVRVEHYASKRTKFIMAHDSRIAC 263 (368)
Q Consensus 203 ~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~--g~-------------~dg~i~i~~~~~~~~~~~~~~~~~i~~ 263 (368)
+++........ ...+..++++++|+. +++.+ |. ..+.|..++.. .....+..+......
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l-~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSL-WFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCE-EEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCE-EEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCcc
Confidence 88765443221 123567899999863 33211 21 12345445444 334445556667899
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEECC-CCce---eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 264 FALTQDGQLLATSSTKGTLVRIFNTL-DGTL---LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 264 v~~sp~g~~l~s~~~dg~~i~iwd~~-~~~~---~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
++|+|+|++|++.+.++. |++||+. +++. ...+ .. +.+.+.+++++++|+++++. ++.|.+||.+
T Consensus 177 i~~s~dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~-~~-~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNA-THRYCLNARGETEYQGVHF-TV-EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEECTTSCEEEEETTTTE-EEEEEECSSSCEEEEEEEE-CC-SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred EEECCCCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEe-eC-CCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 999999998877777788 9999987 5554 2333 21 44567789999999977666 7889999975
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=2.8e-11 Score=108.41 Aligned_cols=231 Identities=12% Similarity=0.064 Sum_probs=147.3
Q ss_pred CCCEEEEEe--C----CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecC----------CCCCCCCCcEE
Q 017642 96 DHGCFAAGT--D----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPLNKVM 159 (368)
Q Consensus 96 ~g~~l~~~~--d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~~~~~~i~ 159 (368)
+++.+.+.. + +.|.++|..+.+....... + ... .+.+++++..++.+. .+ +.|.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~-----~~Vs 152 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--G-FLP--HPVAAEDGSFFAQASTVFERIARGKRT-----DYVE 152 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEE-----EEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--C-CCC--ceEECCCCCEEEEEeccccccccCCCC-----CEEE
Confidence 555554444 2 5699999888776644333 2 223 677787765444332 23 6899
Q ss_pred EEeCCCCcEEEEEecC--------CceeEEEEeeCccEEE---e--CCcEEEEEcCCCeEEEEEeccCC-------CeeE
Q 017642 160 IWDDHQSRCIGELSFR--------SEVRSVKLRRDRIIVV---L--EQKIFVYNFADLKLLHQIETIAN-------PKGL 219 (368)
Q Consensus 160 vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~---~--d~~i~vwd~~~~~~~~~~~~~~~-------~v~~ 219 (368)
++|..+++.+.++... .....+.++|||++++ . ++.|.++|+.+++.+..+..... ....
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~ 232 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVF 232 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEE
Confidence 9999999999888732 3467899999998777 2 46899999999998887754211 0111
Q ss_pred EEEecCCCeEEEEee----------------------------------cCCCCeEEEEecCcceeeeeec---------
Q 017642 220 CAVSQGVGSLVLVCP----------------------------------GLQKGQVRVEHYASKRTKFIMA--------- 256 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~----------------------------------g~~dg~i~i~~~~~~~~~~~~~--------- 256 (368)
+.++++|+..++... ....+.+.+.+.....+..+..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 334444443222110 0012333332221111110000
Q ss_pred ----cCcceEEEEECCCCCEEEEEeC----------CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC-EEEEE
Q 017642 257 ----HDSRIACFALTQDGQLLATSST----------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVS 321 (368)
Q Consensus 257 ----~~~~i~~v~~sp~g~~l~s~~~----------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~ 321 (368)
.......++++++++.+++... .+. |.++|+.+.+.+..+..+ ....++.|+|||+ ++++.
T Consensus 313 ~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~-VsVID~~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF-VVVLNAETGERINKIELG---HEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp GGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE-EEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEEEE
T ss_pred ccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE-EEEEECCCCeEEEEEECC---CCcCeEEEccCCCEEEEEE
Confidence 0011223688999887666542 346 999999999999999863 3588999999999 88888
Q ss_pred e-CCCeEEEEEccCCCCCCC
Q 017642 322 S-DKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 322 s-~dg~i~iwd~~~~~~~~~ 340 (368)
. .++.|.|+|+.+.+....
T Consensus 389 n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 389 SAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp ETTTTEEEEEETTTCCEEEE
T ss_pred cCCCCeEEEEECCCCCEEEE
Confidence 7 589999999999887643
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.41 E-value=7.5e-11 Score=103.85 Aligned_cols=234 Identities=11% Similarity=-0.005 Sum_probs=149.1
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEEecCCCcceEEEcccCC----ceeEEEEEEeCCeEEEEecC--CCCC
Q 017642 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGG--PDPQ 152 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~--~d~~ 152 (368)
.++++|||++|.++. ++.|.+||..+.+......+..+. ...-..+.+++++..++..+ .+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~-- 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA-- 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS--
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC--
Confidence 399999999886664 355999999887765444332100 11233567777776544332 24
Q ss_pred CCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCc-c-EEE--eCCcEEEEEcCC-CeEEEEEeccC----CCee-EEEE
Q 017642 153 YPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR-I-IVV--LEQKIFVYNFAD-LKLLHQIETIA----NPKG-LCAV 222 (368)
Q Consensus 153 ~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~-~l~--~d~~i~vwd~~~-~~~~~~~~~~~----~~v~-~~~~ 222 (368)
+.|.++|+.+++.+.++...+. ..+.|.+ + ++. .||++.+.++.+ ++......... .++. ...|
T Consensus 160 ---~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~ 233 (386)
T 3sjl_D 160 ---PAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 233 (386)
T ss_dssp ---CEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE
T ss_pred ---CeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee
Confidence 7999999999999999874432 2223433 2 222 588888888865 55432221111 1221 1345
Q ss_pred e-cCCCeEEEEeecCCCCeEEEEecCcce---eeeee----------ccCcceEEEEECCCCCEEEEEeC----------
Q 017642 223 S-QGVGSLVLVCPGLQKGQVRVEHYASKR---TKFIM----------AHDSRIACFALTQDGQLLATSST---------- 278 (368)
Q Consensus 223 ~-~~~~~~~l~~~g~~dg~i~i~~~~~~~---~~~~~----------~~~~~i~~v~~sp~g~~l~s~~~---------- 278 (368)
. ++|+ +++++ .+|.+++.+..+.. ...+. -.......++++++++.|+....
T Consensus 234 ~~~dG~-~~~vs---~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 234 SQKAGR-LVWPT---YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp ETTTTE-EEEEB---TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred EcCCCc-EEEEe---CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 4 5664 33333 46889886654432 22221 01223445778999987777643
Q ss_pred CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC-EEEEE-eCCCeEEEEEccCCCCCC
Q 017642 279 KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVS-SDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 279 dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~-s~dg~i~iwd~~~~~~~~ 339 (368)
... |.+.|+.+++.+..+..+ ..+++|++++|++ +|++. ..++.|.++|..+++...
T Consensus 310 ~~~-V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 310 SRF-VVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEE-EEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCE-EEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 135 999999999999998864 3688999999997 66665 458999999999887654
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.41 E-value=2.1e-10 Score=99.13 Aligned_cols=227 Identities=11% Similarity=0.036 Sum_probs=146.3
Q ss_pred CCCCEEEEEEcCCCCEE-EEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 84 PPPTLLHISFNQDHGCF-AAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l-~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
.........|+++|+.| +++. ++.|..|+.. ++ . ..+. .....+..+.+++++.++++...+ +.|.+|
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~--~~~~-~~~~~~~gl~~d~dG~l~v~~~~~-----~~v~~~ 112 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-V--DVLL-DATAFTNGNAVDAQQRLVHCEHGR-----RAITRS 112 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-E--EEEE-ESCSCEEEEEECTTSCEEEEETTT-----TEEEEE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-E--EEEe-CCCCccceeeECCCCCEEEEECCC-----CEEEEE
Confidence 44567789999999954 5554 6679999863 22 2 2222 334457788899888777765544 789999
Q ss_pred eCCCCcEEEEEe-c----CCceeEEEEeeCccEEEeC--------------------CcEEEEEcCCCeEEEEEeccCCC
Q 017642 162 DDHQSRCIGELS-F----RSEVRSVKLRRDRIIVVLE--------------------QKIFVYNFADLKLLHQIETIANP 216 (368)
Q Consensus 162 d~~~~~~~~~~~-~----~~~v~~~~~~~~~~~l~~d--------------------~~i~vwd~~~~~~~~~~~~~~~~ 216 (368)
+.. ++...... . ...+..+++.++|.+.+.| +.|+.||..+++..... ....
T Consensus 113 ~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 113 DAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp CTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 975 55433222 1 2346789999999988843 45777777666544333 3344
Q ss_pred eeEEEEecCCCeEEEEeecC---CCCeEEEEecCcceee---ee-eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECC
Q 017642 217 KGLCAVSQGVGSLVLVCPGL---QKGQVRVEHYASKRTK---FI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTL 289 (368)
Q Consensus 217 v~~~~~~~~~~~~~l~~~g~---~dg~i~i~~~~~~~~~---~~-~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~ 289 (368)
...++|+++++.++++.+.. ..+.|.+++.....+. .+ .........++++++|++.+ ++.+ . |.+||.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~~~-g-v~~~~~- 265 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SSGT-G-VCVFDS- 265 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CCSS-E-EEEECT-
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ecCC-c-EEEECC-
Confidence 56799999999876654210 0257777655432211 11 11233456789999999544 4444 5 999997
Q ss_pred CCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 017642 290 DGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 290 ~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 331 (368)
+++.+..+.. .. .+.+++|+++++.|+.++.++ |..++
T Consensus 266 ~g~~~~~~~~--~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 266 DGQLLGHIPT--PG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp TSCEEEEEEC--SS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CCCEEEEEEC--CC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 6777777765 22 588999999998888877664 44333
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=6e-12 Score=111.21 Aligned_cols=169 Identities=11% Similarity=0.094 Sum_probs=121.9
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCC---------cceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCc
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFR---------EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~ 157 (368)
.++.+++++...++++|+..++++|+++... ....... .... +..+.| ++..++.+ .+ +.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~--~lp~-V~~l~f--d~~~L~v~-~~-----~~ 107 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEK--EIPD-VIFVCF--HGDQVLVS-TR-----NA 107 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEE--ECTT-EEEEEE--ETTEEEEE-ES-----SE
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEe--eCCC-eeEEEE--CCCEEEEE-cC-----Cc
Confidence 5888999999999999997788899976433 1110112 2333 788888 33333333 44 89
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeec
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
|++||+.+........ +...+.++.+.+....++ .||.|.+||+.+++... +...|.+++|+|+| +++ |
T Consensus 108 l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~v---g 178 (388)
T 1xip_A 108 LYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAV---L 178 (388)
T ss_dssp EEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEE---E
T ss_pred EEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEE---E
Confidence 9999998776555554 777888888776653333 79999999999887643 34579999999999 233 4
Q ss_pred CCCCeEEEEecCcce---eeee------e---ccCcceEEEEECCCCCEEEE
Q 017642 236 LQKGQVRVEHYASKR---TKFI------M---AHDSRIACFALTQDGQLLAT 275 (368)
Q Consensus 236 ~~dg~i~i~~~~~~~---~~~~------~---~~~~~i~~v~~sp~g~~l~s 275 (368)
..||.+++|...+.. ...+ . +|...|.+|.|.+++.++++
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 579999998777765 3344 2 37788999999999998876
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=8.7e-11 Score=114.24 Aligned_cols=235 Identities=8% Similarity=-0.025 Sum_probs=145.1
Q ss_pred cCCCCEEEEEe-CCe---EEEEEecCC---CcceEEE-----cccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEE
Q 017642 94 NQDHGCFAAGT-DHG---FRIYNCDPF---REIFRRD-----FERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIW 161 (368)
Q Consensus 94 s~~g~~l~~~~-d~~---i~iw~~~~~---~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vw 161 (368)
+|+|++++... +++ -.+|..+.. ....... +..++...+..+.|+|++..++.+..+.......|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 38999887766 433 566766532 2222222 11123346778899998876655432100001369999
Q ss_pred eCCCCcEEEEEecCCceeEEEEeeCccEEE---eCC--------------cEEEEEcCCCeE--EEEEeccC--CCeeEE
Q 017642 162 DDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQ--------------KIFVYNFADLKL--LHQIETIA--NPKGLC 220 (368)
Q Consensus 162 d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~--------------~i~vwd~~~~~~--~~~~~~~~--~~v~~~ 220 (368)
|+.+++.+....+...+..++|+|| +.++ .++ .|++|++.+++. ...+.... ..+..+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999987654323333468899999 7766 232 399999977652 22333222 347789
Q ss_pred EEecCCCeEEEEeecC--CCCeEEEEecCcc--e-eeeeeccCcceEEEEECCCCCEEEEEeC----CCcEEEEEECCCC
Q 017642 221 AVSQGVGSLVLVCPGL--QKGQVRVEHYASK--R-TKFIMAHDSRIACFALTQDGQLLATSST----KGTLVRIFNTLDG 291 (368)
Q Consensus 221 ~~~~~~~~~~l~~~g~--~dg~i~i~~~~~~--~-~~~~~~~~~~i~~v~~sp~g~~l~s~~~----dg~~i~iwd~~~~ 291 (368)
.|++||+.+++..... ....|++++.... . ...+..+...+.... +++|+.|+..+. ++. |.+||+.++
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~-l~~~d~~~~ 351 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK-IVRVDLSGS 351 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE-EEEEECSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE-EEEEeCCCC
Confidence 9999999866654211 2347888776554 3 555665555555554 488988777665 445 999998875
Q ss_pred -ceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 292 -TLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 292 -~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
.....+..+ +...+..+.|+ ++.++++...|+..+||.+.
T Consensus 352 ~~~~~~l~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 352 TPRFDTVVPE-SKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEEEEECC-CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred ccccEEEecC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 233344432 34457778887 56777888889988888765
No 209
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=4.3e-10 Score=98.95 Aligned_cols=231 Identities=8% Similarity=-0.015 Sum_probs=150.4
Q ss_pred CCEEEEEEcCCCCEEEEEe---CCeEEEEEecCCCcceEEEcc------cCCceeEEEEEEeCCeEEEEecCC-----CC
Q 017642 86 PTLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFE------RGGGIGVVEMLFRCNILALVGGGP-----DP 151 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~-----d~ 151 (368)
..+..++++++|+++++.. ++.++||.++.++ . ..+. ..+-..+..+.+++++.+++.... +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~--~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~- 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-L--IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV- 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-E--EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC-
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-e--ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC-
Confidence 6789999999999988864 2326777776322 1 2221 123467889999987765554321 2
Q ss_pred CCCCCcEEEEeCCCCcEEEEEecC-------CceeEEEEeeC-ccEEEe------CCcEEEEEcCCCeEEEEEeccC---
Q 017642 152 QYPLNKVMIWDDHQSRCIGELSFR-------SEVRSVKLRRD-RIIVVL------EQKIFVYNFADLKLLHQIETIA--- 214 (368)
Q Consensus 152 ~~~~~~i~vwd~~~~~~~~~~~~~-------~~v~~~~~~~~-~~~l~~------d~~i~vwd~~~~~~~~~~~~~~--- 214 (368)
+.|.+||+.+++.+..+... ..+..++++++ +...+. ++.|.+||+.+++..+.+..|.
T Consensus 93 ----~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 93 ----PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp ----CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred ----CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 68999999999887777622 34689999975 444442 4689999998887666553310
Q ss_pred --------------------------CCeeEEEEecCCCeEEEEeecCCCCeEEEEecC----c-----ceee--eeecc
Q 017642 215 --------------------------NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA----S-----KRTK--FIMAH 257 (368)
Q Consensus 215 --------------------------~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~----~-----~~~~--~~~~~ 257 (368)
.....++++++++.++++.. ....+...+.. . +... ...++
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM--HSTSMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES--SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC--CCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence 12466899999987666532 23344332211 0 0001 11234
Q ss_pred CcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEE
Q 017642 258 DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVH 328 (368)
Q Consensus 258 ~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~ 328 (368)
......++++++|+++++...++. |.+||..+++.. .+....+...+.+++|.++|+++++.+..+.+.
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~-V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~ 315 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSA-IGVITSADRAYK-LLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSA 315 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTE-EEEEETTTTEEE-EEEECGGGSCEEEEEECTTSCEEEEECCGGGSG
T ss_pred CCCCceEEECCCCCEEEEccCCCe-EEEEECCCCCEE-EEEECCceecCCeeEECCCCcEEEEeCcccccc
Confidence 445677999999998888888888 999998566643 333221234689999999999888876544443
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=1.8e-09 Score=92.57 Aligned_cols=231 Identities=10% Similarity=0.001 Sum_probs=152.8
Q ss_pred CCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
...+.++++.++|+++++.. ++.|.+||.+ ++. ....+. ........+.+++++.++++...+ +.|..||.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLP-QPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECS-STTCCEEEEEECSTTCEEEEETTT-----TEEEEECT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCC-CCCCCCccceECCCCCEEEEccCC-----CeEEEECC
Confidence 35788999999999777766 5679999866 332 222222 234567788888777666665544 78999997
Q ss_pred CCCcEEEE-Ee-cCCceeEEEEeeCccEEE-e--CCcEEEEEcCCCeEEEE-EeccCCCeeEEEEecCCCeEEEEeecCC
Q 017642 164 HQSRCIGE-LS-FRSEVRSVKLRRDRIIVV-L--EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 164 ~~~~~~~~-~~-~~~~v~~~~~~~~~~~l~-~--d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
. ++.... +. ....+..+++.+++.+.+ . ++.|..||. +++.... +.........+++.+++. ++++. ..
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~--~~ 207 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA-LWFVE--IM 207 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEE--TT
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC-EEEEc--cC
Confidence 7 654422 22 346789999999988666 2 578999998 5554432 122334567788888874 44432 34
Q ss_pred CCeEEEEecCcceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC
Q 017642 238 KGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (368)
Q Consensus 238 dg~i~i~~~~~~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~ 316 (368)
.+.|.+++..+..... +..+...+.+++++++|+++++...++. |..||. +++.. .+........+.++++.++|+
T Consensus 208 ~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~ 284 (300)
T 2qc5_A 208 GNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGS 284 (300)
T ss_dssp TTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTTSC
T ss_pred CCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCCCC
Confidence 5677777665443322 2334566899999999997776666677 999997 45433 333221335688999999998
Q ss_pred EEEEEeCCCeEEEEEcc
Q 017642 317 WLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 317 ~l~s~s~dg~i~iwd~~ 333 (368)
++++.. . .|..+|.+
T Consensus 285 l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 285 VWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEECS-S-EEEEEEEC
T ss_pred EEEEcc-C-ceEEeCCC
Confidence 666554 4 67777653
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.37 E-value=1.7e-09 Score=95.96 Aligned_cols=228 Identities=12% Similarity=0.056 Sum_probs=144.4
Q ss_pred CCCCEEEEEe--CCeEEEEEecCC--CcceEEEcc------cCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 95 QDHGCFAAGT--DHGFRIYNCDPF--REIFRRDFE------RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 95 ~~g~~l~~~~--d~~i~iw~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
.++++|++.+ ++.|.|+|+.+. +....+.++ ......-..+...++++++...+....-..+.|.++|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 8899988877 666999998643 334444441 012223345566788855543332111122689999999
Q ss_pred CCcEEEEEe-cCC---ceeEEEEeeCccEEE-e---------------------CCcEEEEEcCCCeEEEEEeccC--CC
Q 017642 165 QSRCIGELS-FRS---EVRSVKLRRDRIIVV-L---------------------EQKIFVYNFADLKLLHQIETIA--NP 216 (368)
Q Consensus 165 ~~~~~~~~~-~~~---~v~~~~~~~~~~~l~-~---------------------d~~i~vwd~~~~~~~~~~~~~~--~~ 216 (368)
+++.+.++. ... --+.+-|+|+++.++ . +.+|.+||+.+++.+.++.... ..
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 999999987 222 245688899998777 3 4799999999998888886531 12
Q ss_pred eeEEEE--ecCCCeEEEEee---cCCCCeEEEEecCcce---eee--eec----------------cCcceEEEEECCCC
Q 017642 217 KGLCAV--SQGVGSLVLVCP---GLQKGQVRVEHYASKR---TKF--IMA----------------HDSRIACFALTQDG 270 (368)
Q Consensus 217 v~~~~~--~~~~~~~~l~~~---g~~dg~i~i~~~~~~~---~~~--~~~----------------~~~~i~~v~~sp~g 270 (368)
...+.| +|+++..++++. -..+++|.+|..+... .+. +.. -......|.+++||
T Consensus 253 P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 253 ALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred cceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 223444 999998777642 0045677663332211 111 111 02346789999999
Q ss_pred CEEEEEeCCCcEEEEEECCC---CceeEeeEeccC------------cccEEEEEEecCCCEEEEEe
Q 017642 271 QLLATSSTKGTLVRIFNTLD---GTLLQEVRRGAD------------RAEIYSLAFSSNAQWLAVSS 322 (368)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~~~---~~~~~~~~~~~~------------~~~v~~l~~sp~~~~l~s~s 322 (368)
++|+++......|.+||+.. .+.+..+..+.. .+.-..++++|||++|+++.
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 98888777443399999863 345555544200 01357899999999999887
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.36 E-value=1.2e-09 Score=94.06 Aligned_cols=198 Identities=13% Similarity=0.094 Sum_probs=130.5
Q ss_pred EEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEE
Q 017642 132 VVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQ 209 (368)
Q Consensus 132 ~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~ 209 (368)
.-...|++ ++.++++.... +.|..||..+++. ..+.....+.++++++++.+++ .++.|.+||.++++....
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~-----~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA-----KKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT-----TEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEE
T ss_pred ccCCeEECCCCEEEEEECCC-----CEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEE
Confidence 34566776 34444444444 8999999887765 4556678899999999999777 678999999988865433
Q ss_pred Eecc----CCCeeEEEEecCCCeEEEEeecC---------CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEE-E
Q 017642 210 IETI----ANPKGLCAVSQGVGSLVLVCPGL---------QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLA-T 275 (368)
Q Consensus 210 ~~~~----~~~v~~~~~~~~~~~~~l~~~g~---------~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~-s 275 (368)
.... ...+..+++.++|+ +++...+. ..+.|...+..+.. ..+..+....+.++|+|+++.|+ +
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEEe
Confidence 3221 23467789999987 44433221 12334334433332 23333444568999999998665 4
Q ss_pred EeCCCcEEEEEEC--CCCcee--EeeEe-ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 276 SSTKGTLVRIFNT--LDGTLL--QEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 276 ~~~dg~~i~iwd~--~~~~~~--~~~~~-~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
.+.++. |.+||+ .++... ..+.. ..+.+....+++.++|++.++...++.|.+||.++++..
T Consensus 167 ~~~~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 167 DSLSYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp EGGGTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred cCCCCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 455677 999987 455432 11211 112356789999999998888777889999999877643
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=2e-11 Score=107.84 Aligned_cols=171 Identities=15% Similarity=0.138 Sum_probs=121.3
Q ss_pred eEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCc-----------EEEEEecCCceeEEEEeeCccEEE--eCCcEE
Q 017642 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR-----------CIGELSFRSEVRSVKLRRDRIIVV--LEQKIF 197 (368)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~ 197 (368)
.+..++.++....+++++. ..+++|++.+.+ ......+.. |+.++| |+.+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~a~~~------~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG------SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEET------TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEE
T ss_pred cccEEEEcCCCCEEEEeCC------CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEE
Confidence 3556677776655666655 478889865332 223445666 999999 777776 789999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS 277 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~ 277 (368)
+||+++......+..+...+..+.+.+. .+++ +..||.+.+|+........ +...|+|++|+|+| ++.|.
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av---~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVI---LNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSS--EEEE---EETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEE
T ss_pred EEEchhhhccCccceeecceeeEEecCC--CEEE---EECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEE
Confidence 9999876655555566667766555433 3332 3479999999887544332 45689999999999 67899
Q ss_pred CCCcEEEEEECCCCce--eEeeEe----c---cCcccEEEEEEecCCCEEEEE
Q 017642 278 TKGTLVRIFNTLDGTL--LQEVRR----G---ADRAEIYSLAFSSNAQWLAVS 321 (368)
Q Consensus 278 ~dg~~i~iwd~~~~~~--~~~~~~----~---~~~~~v~~l~~sp~~~~l~s~ 321 (368)
.||. +++|+...++. ..++.. . .|...|.+|.|.+++.++++-
T Consensus 180 ~dg~-i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 180 KDRS-FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TTSC-EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCc-EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999 99998877765 555521 1 146789999999999988864
No 214
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.30 E-value=2.2e-10 Score=96.93 Aligned_cols=194 Identities=9% Similarity=-0.012 Sum_probs=128.8
Q ss_pred eEEEEEEeCCeEEEE-ecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeE
Q 017642 131 GVVEMLFRCNILALV-GGGPDPQYPLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKL 206 (368)
Q Consensus 131 ~~~~~~~~~~~~~~~-s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~ 206 (368)
....+++++++.+++ +...+ +.|.+||..++....... ....+.++++++++.+++ .++.|.+||......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY-----GRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS-----CEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCC
T ss_pred CccceEECCCCCEEEEccCCC-----CcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceE
Confidence 566788888777666 54444 899999976554322111 335788999999988766 367899999865543
Q ss_pred EEEEe-ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeee-eeccCcceEEEEECCCCCEEEEEeCCCcEEE
Q 017642 207 LHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF-IMAHDSRIACFALTQDGQLLATSSTKGTLVR 284 (368)
Q Consensus 207 ~~~~~-~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~-~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~ 284 (368)
..+. ........+++.++++ ++++ ...++.|.+++........ .......+.+++++++|+++++...++. |.
T Consensus 100 -~~~~~~~~~~p~~i~~~~~g~-l~v~--~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~ 174 (270)
T 1rwi_B 100 -TVLPFDGLNYPEGLAVDTQGA-VYVA--DRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR-VV 174 (270)
T ss_dssp -EECCCCSCSSEEEEEECTTCC-EEEE--EGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTE-EE
T ss_pred -eeeecCCcCCCcceEECCCCC-EEEE--ECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCE-EE
Confidence 3332 2224577899999886 4443 2346778776543322221 2223345788999999997777777778 99
Q ss_pred EEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 285 IFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 285 iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
+||............ +...+.+|+++++|.++++...++.|.+|+.....
T Consensus 175 ~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 175 KLEAESNNQVVLPFT--DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp EECTTTCCEEECCCS--SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred EEecCCCceEeeccc--CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 999877665433222 23568899999999877777778899999986543
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=1.2e-09 Score=94.45 Aligned_cols=193 Identities=10% Similarity=0.053 Sum_probs=127.2
Q ss_pred EEEEEEeCCeEEEEe-------cCCCCCCCCCcEEEEeCCCCcEEEEEe-----cCCceeEEEEeeC-ccEEE--eCCcE
Q 017642 132 VVEMLFRCNILALVG-------GGPDPQYPLNKVMIWDDHQSRCIGELS-----FRSEVRSVKLRRD-RIIVV--LEQKI 196 (368)
Q Consensus 132 ~~~~~~~~~~~~~~s-------~~~d~~~~~~~i~vwd~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~--~d~~i 196 (368)
...++|++++.++++ ...+ +.|.+||..+++...... +...+.+++++++ +.+++ .++.|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l 94 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPA-----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGL 94 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEEC-----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCC-----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCE
Confidence 456777777766666 4444 889999988887643322 3467899999999 87665 34589
Q ss_pred EEEEcCCCeEEEE-Eec----cCCCeeEEEEecCCCeEEEEeecCCC---------------CeEEEEecCcceeeeeec
Q 017642 197 FVYNFADLKLLHQ-IET----IANPKGLCAVSQGVGSLVLVCPGLQK---------------GQVRVEHYASKRTKFIMA 256 (368)
Q Consensus 197 ~vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~l~~~g~~d---------------g~i~i~~~~~~~~~~~~~ 256 (368)
.+||.. ++.... ... ....+..+++.++++ ++++. ..+ +.|..++..++ ...+..
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~ 169 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITA--PAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDT 169 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEE--CBCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEe--cCcccccccccccccCCCCeEEEECCCCC-EEEecc
Confidence 999988 765433 221 123467899999886 34332 222 45555555433 333333
Q ss_pred cCcceEEEEEC----CCCCEEEEE-eCCCcEEEEEECC-CCce-----eEeeEeccCc-ccEEEEEEecCCCEEEEEeCC
Q 017642 257 HDSRIACFALT----QDGQLLATS-STKGTLVRIFNTL-DGTL-----LQEVRRGADR-AEIYSLAFSSNAQWLAVSSDK 324 (368)
Q Consensus 257 ~~~~i~~v~~s----p~g~~l~s~-~~dg~~i~iwd~~-~~~~-----~~~~~~~~~~-~~v~~l~~sp~~~~l~s~s~d 324 (368)
+......++|+ ++|+.|+.+ ..++. |.+||+. +++. ...+.. +. ..+..++++++|+++++...+
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~--~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPG--THEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCC--CSSCEEEEEEEBTTCCEEEEEETT
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCC--CCCCCCCceEECCCCCEEEEEcCC
Confidence 44456889999 999765554 55677 9999986 4432 122221 22 467889999999988888788
Q ss_pred CeEEEEEccCCCC
Q 017642 325 GTVHVFNLKVNSG 337 (368)
Q Consensus 325 g~i~iwd~~~~~~ 337 (368)
+.|.+||.++++.
T Consensus 247 ~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 247 SHIEVFGPDGGQP 259 (314)
T ss_dssp TEEEEECTTCBSC
T ss_pred CEEEEEcCCCCcE
Confidence 8999999875544
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=1.1e-08 Score=89.20 Aligned_cols=189 Identities=10% Similarity=-0.025 Sum_probs=122.4
Q ss_pred EEEEeCC-eEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEe
Q 017642 134 EMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIE 211 (368)
Q Consensus 134 ~~~~~~~-~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~ 211 (368)
...|+++ +.++++...+ +.|..||..+++. ..+.....+.++++++++.+++ .+..|.+||..+++......
T Consensus 53 gp~~~~~~~~l~~~d~~~-----~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILE-----RELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEETTTTEEEEEEGGG-----TEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred CCeEeCCCCEEEEEECCC-----CEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEee
Confidence 4566663 3444444333 8999999887754 3455567899999999998877 56679999998887543322
Q ss_pred cc----CCCeeEEEEecCCCeEEEEeecC----CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEE-eCCCcE
Q 017642 212 TI----ANPKGLCAVSQGVGSLVLVCPGL----QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATS-STKGTL 282 (368)
Q Consensus 212 ~~----~~~v~~~~~~~~~~~~~l~~~g~----~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~-~~dg~~ 282 (368)
.. ...+..++++++|+ +++...+. ..+.|..++ ++ ....+..+......++|+|+|+.|+.+ +.++.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~-~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~- 202 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA-KG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNR- 202 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE-TT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCE-
T ss_pred CCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe-CC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE-
Confidence 11 23467889999987 34432111 123444444 33 333333344457899999999866555 45677
Q ss_pred EEEEECC--CC-cee--EeeEe-ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEc
Q 017642 283 VRIFNTL--DG-TLL--QEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNL 332 (368)
Q Consensus 283 i~iwd~~--~~-~~~--~~~~~-~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~ 332 (368)
|.+||+. ++ +.. ..+.. ......+..+++.++|.++++...++.|.+||.
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 9999986 55 321 12211 112345788999999998877767788999987
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.24 E-value=3.1e-08 Score=82.63 Aligned_cols=205 Identities=12% Similarity=0.058 Sum_probs=137.0
Q ss_pred EEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCC--ceeEEEEeeCccEEE--eCCcEE
Q 017642 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRS--EVRSVKLRRDRIIVV--LEQKIF 197 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~--~d~~i~ 197 (368)
..+.++.......+.+++++.++++.+.. ..+.|.++|+.+++.+..+.... ....+++..+..+++ .++.+.
T Consensus 13 ~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 13 NEFPHDPYAFTQGLVYAENDTLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp EEEECCTTCCEEEEEECSTTEEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEE
T ss_pred EEEECCCCCCcccEEEeCCCeEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEE
Confidence 33433444445678888855555554320 12799999999999999887333 233455554333333 489999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-ceeeeeecc--C---cceEEEEECCCCC
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-KRTKFIMAH--D---SRIACFALTQDGQ 271 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~--~---~~i~~v~~sp~g~ 271 (368)
++|..+++.+.++... .+. ...+++|++.++++- | ++.|.+.+... +.+..+... . ..++.+.|. +|+
T Consensus 90 viD~~t~~v~~~i~~g-~~~-g~glt~Dg~~l~vs~-g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~ 163 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTHQ-MKD-GWGLATDGKILYGSD-G--TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE 163 (266)
T ss_dssp EEETTTTEEEEEEECC-SSS-CCEEEECSSSEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCCCcEEEEEECC-CCC-eEEEEECCCEEEEEC-C--CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE
Confidence 9999999999988644 121 245778998866532 3 67888855443 545554422 1 136788888 776
Q ss_pred EEEEEeCCCcEEEEEECCCCceeEeeEecc-----------CcccEEEEEEecCCCEE-EEEeCCCeEEEEEccCCC
Q 017642 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWL-AVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~sp~~~~l-~s~s~dg~i~iwd~~~~~ 336 (368)
+++....++. |.+.|..+++.+..+.... .......|+|+|+++.| +++...++|.+.++....
T Consensus 164 lyvn~~~~~~-V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 164 VWANIWQTDC-IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTSSE-EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEecCCCCe-EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 5555555677 9999999999998887520 01256899999998755 555578899999998764
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.21 E-value=3.6e-09 Score=95.20 Aligned_cols=194 Identities=10% Similarity=0.006 Sum_probs=129.5
Q ss_pred eEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eCC--cEEEEEcCCCe
Q 017642 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQ--KIFVYNFADLK 205 (368)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~--~i~vwd~~~~~ 205 (368)
....+++++++.++++...+ +.|++||..+++............ ++|++++..++ .++ .|++|+...+.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CEEEEEECSTTEEEEEETTT-----TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CceEEEEeCCCCEEEEecCC-----CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 46678888888777776655 899999988877665555444444 99999998665 223 79999987654
Q ss_pred EEEEE----eccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeee-----eccCcce-E-EEEECCC-CCEE
Q 017642 206 LLHQI----ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFI-----MAHDSRI-A-CFALTQD-GQLL 273 (368)
Q Consensus 206 ~~~~~----~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~-----~~~~~~i-~-~v~~sp~-g~~l 273 (368)
....+ .........+++++++..+++ + ..++.|+.++........+ .++...- . .++|+|+ +.++
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~--d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYF-V--DSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEE-E--CTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEE-E--ECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 43333 213455677999996666555 2 2477888877665444333 1122222 3 8999995 5555
Q ss_pred EEEeCCCcEEEEEECCCCceeEeeEecc-------------CcccEEEEEEecCCCEEEEEe-CCCeEEEEEccCCC
Q 017642 274 ATSSTKGTLVRIFNTLDGTLLQEVRRGA-------------DRAEIYSLAFSSNAQWLAVSS-DKGTVHVFNLKVNS 336 (368)
Q Consensus 274 ~s~~~dg~~i~iwd~~~~~~~~~~~~~~-------------~~~~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~~~~ 336 (368)
++-..++. |+.|+... + +..+.+.. .-.....++++++|+++++-. .++.|+.|++.++.
T Consensus 283 v~d~~~~~-I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 283 MSDQNLSS-VYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEETTTTE-EEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCE-EEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 56566777 99998653 3 33333310 013478999999999877777 78999999976554
No 219
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.20 E-value=1.1e-07 Score=80.23 Aligned_cols=231 Identities=6% Similarity=-0.047 Sum_probs=138.1
Q ss_pred CCEEEEEeCCeEEEEEecCCCcc---eEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEE
Q 017642 97 HGCFAAGTDHGFRIYNCDPFREI---FRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL 172 (368)
Q Consensus 97 g~~l~~~~d~~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~ 172 (368)
|.+|..+..+.|+.++++..... ....+. ........+++++ ++.++++.... +.|..++...+.....+
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~-~~~~~~~gi~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLH-IPAKVIIGLAFDCVDKVVYWTDISE-----PSIGRASLHGGEPTTII 74 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEE-EEEEEEEEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeec-CCCCcEEEEEEecCCCEEEEEECCC-----CEEEEEecCCCCcEEEE
Confidence 45666666557888888754321 011111 1223456788886 34455554444 89999998766544333
Q ss_pred e-cCCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC
Q 017642 173 S-FRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (368)
Q Consensus 173 ~-~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~ 247 (368)
. .......+++++++. +.+ ..+.|.++++........+.........+++++++..++++-.+...+.|...+.+
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 3 235788999998644 443 35789999986432222222222345678999988777765422224677766655
Q ss_pred cceeeeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCC
Q 017642 248 SKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 248 ~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
+.....+. ........+++++++..|+.+.. .+. |.++|+........+.. ......++.. ++.++++....+
T Consensus 155 g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~---~~~P~gi~~d-~~~lyva~~~~~ 229 (267)
T 1npe_A 155 GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPGRRKVLEG---LQYPFAVTSY-GKNLYYTDWKTN 229 (267)
T ss_dssp SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEEEEEEEEC---CCSEEEEEEE-TTEEEEEETTTT
T ss_pred CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCceEEEecC---CCCceEEEEe-CCEEEEEECCCC
Confidence 54443332 22345789999998776655554 456 99999875544333332 2234566654 344444444568
Q ss_pred eEEEEEccCCCCC
Q 017642 326 TVHVFNLKVNSGS 338 (368)
Q Consensus 326 ~i~iwd~~~~~~~ 338 (368)
.|.++|..+++..
T Consensus 230 ~v~~~d~~~g~~~ 242 (267)
T 1npe_A 230 SVIAMDLAISKEM 242 (267)
T ss_dssp EEEEEETTTTEEE
T ss_pred eEEEEeCCCCCce
Confidence 9999999877644
No 220
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.17 E-value=4.6e-08 Score=86.78 Aligned_cols=232 Identities=8% Similarity=-0.034 Sum_probs=141.9
Q ss_pred CCCCEEEEEeC--C----eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCC-C----CCCCCcEEEEeC
Q 017642 95 QDHGCFAAGTD--H----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPD-P----QYPLNKVMIWDD 163 (368)
Q Consensus 95 ~~g~~l~~~~d--~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d-~----~~~~~~i~vwd~ 163 (368)
|+++++.+... . .|.+||..+++.. ..+. ..... .+.+++++..++.+... . ...++.|.+||.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~--~~i~-~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSIL--GHVN-GGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEE--EEec-CCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 56665544431 1 6789998876654 4443 23222 77888887665554310 0 001268999999
Q ss_pred CCCcEEEEEecC--------CceeEEEEeeCccEEE----e-CCcEEEEEcCCCeEEEE-EeccCCCeeEEEEecCCCeE
Q 017642 164 HQSRCIGELSFR--------SEVRSVKLRRDRIIVV----L-EQKIFVYNFADLKLLHQ-IETIANPKGLCAVSQGVGSL 229 (368)
Q Consensus 164 ~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~----~-d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~ 229 (368)
.+.+.+.++... .....++++|||++++ . ++.|.++| .+++.+.. +.... ++.+.++++..
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~~ 179 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPST 179 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCce
Confidence 999888877632 3456899999999887 2 46799999 99988877 64322 25566777765
Q ss_pred EEEeecCCCCeEEEEecCcceeeeee-----ccCcce-EEEEECCCCCEEEEEeCCCcEEEEEECCCCc--eeEeeEec-
Q 017642 230 VLVCPGLQKGQVRVEHYASKRTKFIM-----AHDSRI-ACFALTQDGQLLATSSTKGTLVRIFNTLDGT--LLQEVRRG- 300 (368)
Q Consensus 230 ~l~~~g~~dg~i~i~~~~~~~~~~~~-----~~~~~i-~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~--~~~~~~~~- 300 (368)
+++. +.||.+.+++..++...... ....++ ....+.+++..++..+..+. +.+.|+..+. .+..+...
T Consensus 180 ~~~~--~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 180 FYLL--CAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNKAPIDALS 256 (373)
T ss_pred EEEE--cCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEeeeeeecC
Confidence 5554 35777777554444432211 111221 23456666665554556778 9999987653 22222210
Q ss_pred -------cCcccEEEEEEecCCCEEEEEeC----------CCeEEEEEccCCCCCC
Q 017642 301 -------ADRAEIYSLAFSSNAQWLAVSSD----------KGTVHVFNLKVNSGSA 339 (368)
Q Consensus 301 -------~~~~~v~~l~~sp~~~~l~s~s~----------dg~i~iwd~~~~~~~~ 339 (368)
........+.+++|++.|+++.. ++.|.++|+.+.+...
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~ 312 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSS 312 (373)
T ss_pred CcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEE
Confidence 01223455789999998877643 3579999998887644
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.15 E-value=1.7e-09 Score=95.25 Aligned_cols=228 Identities=7% Similarity=-0.017 Sum_probs=140.6
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEEecCCCcceEEEcccCC----ceeEEEEEEeCCeEEEEecC--CCCC
Q 017642 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGG--PDPQ 152 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~--~d~~ 152 (368)
.+.++|||+++.++. ++.|.+||..+.+......+.... ...-..+.+++++..++.+. ..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~-- 146 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS-- 146 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS--
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC--
Confidence 699999999887775 455999999888776444331000 01233567777775444332 22
Q ss_pred CCCCcEEE--EeCCCCcEEEEEecCCceeEEEEeeCc--cEEE--eCCcEEEEEcCC-----CeEEE----EEeccCCCe
Q 017642 153 YPLNKVMI--WDDHQSRCIGELSFRSEVRSVKLRRDR--IIVV--LEQKIFVYNFAD-----LKLLH----QIETIANPK 217 (368)
Q Consensus 153 ~~~~~i~v--wd~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~--~d~~i~vwd~~~-----~~~~~----~~~~~~~~v 217 (368)
+.|.+ +|+.+ +.++...+. +.+.|++ .+++ .|+.+.+.|+.+ ++... .+.....+.
T Consensus 147 ---~~v~V~~iD~~t---v~~i~v~~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~ 217 (368)
T 1mda_H 147 ---AAAGLSVPGASD---DQLTKSASC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA 217 (368)
T ss_dssp ---CEEEEEETTTEE---EEEEECSSC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE
T ss_pred ---CeEEEEEEchhh---ceEEECCCc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc
Confidence 67888 99877 555553222 2234544 3333 588888889876 44321 111122232
Q ss_pred eEEEEecCCCeEEEEeecCCCCeEEEEecCcc---eeeeeec-------c---CcceEEEEECCCCCEEEEEeC-C----
Q 017642 218 GLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMA-------H---DSRIACFALTQDGQLLATSST-K---- 279 (368)
Q Consensus 218 ~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~-------~---~~~i~~v~~sp~g~~l~s~~~-d---- 279 (368)
. .+++..++++. . +.+.+.+.... .+..+.. + ......+++++|++.++.+.. .
T Consensus 218 ---~-~~~~~~~~~vs---~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~ 289 (368)
T 1mda_H 218 ---Q-ANYPGMLVWAV---A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSC 289 (368)
T ss_dssp ---E-ETTTTEEEECB---S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCT
T ss_pred ---c-cccCCEEEEEc---C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcc
Confidence 3 66666644433 3 77777444321 1221110 1 111222689999997776543 2
Q ss_pred ----CcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC-EEEEEe-CCCeEEEEEccCCCCCCC
Q 017642 280 ----GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ-WLAVSS-DKGTVHVFNLKVNSGSAR 340 (368)
Q Consensus 280 ----g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~-~l~s~s-~dg~i~iwd~~~~~~~~~ 340 (368)
+. +.++|+.+++.+..+..+ .....|+|+|||+ ++++.. .++.|.++|+.+.+....
T Consensus 290 ~~~~~~-~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 290 LAAAEN-TSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp TSCEEE-EEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred cccCCC-EEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE
Confidence 35 679999999999998863 2588999999998 456666 589999999999876543
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.14 E-value=5.1e-09 Score=100.94 Aligned_cols=196 Identities=8% Similarity=0.077 Sum_probs=126.6
Q ss_pred CceeEEEEEEeCCeEEEEe-----cCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eCC-----
Q 017642 128 GGIGVVEMLFRCNILALVG-----GGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQ----- 194 (368)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~s-----~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~----- 194 (368)
+...+..+.|++++..++- +++. ..|++||+.+++.+...........++|+ |++.++ .+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~-----~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDW-----REIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCE-----EEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCce-----EEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 4456778899999877662 3322 57999999999876542222224678899 998777 242
Q ss_pred --------cEEEEEcCCCeE--EEEEec---cCCCeeEEEEecCCCeEEEEee-cCCCCeEEEEecCcc--eeeeeeccC
Q 017642 195 --------KIFVYNFADLKL--LHQIET---IANPKGLCAVSQGVGSLVLVCP-GLQKGQVRVEHYASK--RTKFIMAHD 258 (368)
Q Consensus 195 --------~i~vwd~~~~~~--~~~~~~---~~~~v~~~~~~~~~~~~~l~~~-g~~dg~i~i~~~~~~--~~~~~~~~~ 258 (368)
.|++|++.++.. ...+.. +......+.+++||+.+++... +.....|++++.... ....+..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 399999976542 223322 2334667899999998666542 223357888765443 455666666
Q ss_pred cceEEEEECCCCCEEE-EEeCC---CcEEEEEECCCCce--eEeeEeccCcccEEEEEEecCCCEEEEEeC-CC--eEEE
Q 017642 259 SRIACFALTQDGQLLA-TSSTK---GTLVRIFNTLDGTL--LQEVRRGADRAEIYSLAFSSNAQWLAVSSD-KG--TVHV 329 (368)
Q Consensus 259 ~~i~~v~~sp~g~~l~-s~~~d---g~~i~iwd~~~~~~--~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~-dg--~i~i 329 (368)
...... |+++|..|+ ....+ +. |.++|+.++.. ...+.. +...+. .|+++++.|+.... ++ .|++
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~--~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIP--ERQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEEC--CCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEec--CCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 666555 566666544 44433 46 99999987654 334554 333444 89999998876654 44 6889
Q ss_pred EEccCC
Q 017642 330 FNLKVN 335 (368)
Q Consensus 330 wd~~~~ 335 (368)
|++..+
T Consensus 355 ~d~~g~ 360 (693)
T 3iuj_A 355 FDYEGK 360 (693)
T ss_dssp ECTTSC
T ss_pred EECCCC
Confidence 988744
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.12 E-value=6.5e-08 Score=79.80 Aligned_cols=190 Identities=11% Similarity=0.153 Sum_probs=125.9
Q ss_pred EEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeE--EEEeeCccEEE--eCCcEE
Q 017642 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVV--LEQKIF 197 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~--~d~~i~ 197 (368)
..+.|........+.|+.+ .++.+.+.+ ....|+++|+.+++.+..+........ +++..+..+++ .++.+.
T Consensus 35 ~~~phd~~~ftqGL~~~~~-~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 35 HSYPHDTKAFTEGFFYRNG-YFYESTGLN---GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEECCTTCEEEEEEEETT-EEEEEEEET---TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEecCCCCcccceEEEECC-EEEEECCCC---CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEE
Confidence 4444456666677888855 444444433 013899999999999999885555544 44444434444 489999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-cceeeeeecc--C---cceEEEEECCCCC
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-SKRTKFIMAH--D---SRIACFALTQDGQ 271 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~--~---~~i~~v~~sp~g~ 271 (368)
+||.++++.+.++..... ...++++++.+++. .| ++.|.+.+.. .+.+..+... . ..++.+.|. +|+
T Consensus 111 v~D~~t~~~~~ti~~~~e---G~glt~dg~~L~~S-dG--s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~ 183 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDGE---GWGLTHNDQYLIMS-DG--TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE 183 (262)
T ss_dssp EEETTTCCEEEEEECSSC---CCCEEECSSCEEEC-CS--SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECccCcEEEEEECCCC---ceEEecCCCEEEEE-CC--CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE
Confidence 999999999999875432 23455788765543 23 5678875544 4555554432 2 234567776 777
Q ss_pred EEEEEeCCCcEEEEEECCCCceeEeeEecc----------CcccEEEEEEecCCCEEEEEeC
Q 017642 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA----------DRAEIYSLAFSSNAQWLAVSSD 323 (368)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~----------~~~~v~~l~~sp~~~~l~s~s~ 323 (368)
+.+..-.++. |.+.|.++++.+..+.... .....+.|+|+|+++.|.+.+.
T Consensus 184 lyan~w~~~~-I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 184 IFANVWQTNK-IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTSSE-EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEEccCCe-EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 6655555667 9999999999988877521 1135689999999887776664
No 224
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.10 E-value=5e-09 Score=96.27 Aligned_cols=235 Identities=10% Similarity=0.048 Sum_probs=150.0
Q ss_pred CCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEE-e-CCeEEEEecCCCC-------------CCCCCc
Q 017642 95 QDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-R-CNILALVGGGPDP-------------QYPLNK 157 (368)
Q Consensus 95 ~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~s~~~d~-------------~~~~~~ 157 (368)
+||++|.+.. ++.|.+.|+++.+......+. .......+.+ . +++.+++.++... ...++.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 4899998877 344999999988766444553 2223445554 2 4444443332100 011268
Q ss_pred EEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE--e-C--------------------------------------CcE
Q 017642 158 VMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV--L-E--------------------------------------QKI 196 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~-d--------------------------------------~~i 196 (368)
+.++|..+.+.+.++...+....++++|+|++++ . + +.|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999999999999988555778888999988777 1 1 247
Q ss_pred EEEEcCC--CeE-EEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc-------------eeeeeeccCcc
Q 017642 197 FVYNFAD--LKL-LHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-------------RTKFIMAHDSR 260 (368)
Q Consensus 197 ~vwd~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-------------~~~~~~~~~~~ 260 (368)
.+.|.++ ++. +..+.... ...++.++|||+++++ ++..+.+|.+++.... ....+. -...
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V--~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~g 332 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCV--AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLG 332 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEE--ECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSC
T ss_pred EEEeCcccCCceeEEEEecCC-CceEEEEcCCCCEEEE--eCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCC
Confidence 7777776 444 44554332 3346899999997554 3566788998766643 122222 2335
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEECCC----------CceeEeeEeccCcccE---EEEEEecCCCEEEEEeC---C
Q 017642 261 IACFALTQDGQLLATSSTKGTLVRIFNTLD----------GTLLQEVRRGADRAEI---YSLAFSSNAQWLAVSSD---K 324 (368)
Q Consensus 261 i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~----------~~~~~~~~~~~~~~~v---~~l~~sp~~~~l~s~s~---d 324 (368)
...++|+++|...++.-.|+. |.+||+.+ .+.+.++..+...+.. .++.++|||++|++... |
T Consensus 333 P~h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred cceEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 688999999954556666888 99999987 5567677663211111 12345799999998852 4
Q ss_pred Ce----------EEEEEccCCC
Q 017642 325 GT----------VHVFNLKVNS 336 (368)
Q Consensus 325 g~----------i~iwd~~~~~ 336 (368)
+. -.++|+..++
T Consensus 412 r~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 412 RFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp SSCCCCSSCCEEEEEEECSSSS
T ss_pred ccccCCCCCCCcceEEEcCCCc
Confidence 42 1888985443
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.09 E-value=4.6e-08 Score=93.72 Aligned_cols=237 Identities=9% Similarity=0.037 Sum_probs=147.4
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcc-cCCc-eeEE-EEEEeCCeEEEEecCC-CCCCCCCcEEEEeCCCCcEEEE
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFE-RGGG-IGVV-EMLFRCNILALVGGGP-DPQYPLNKVMIWDDHQSRCIGE 171 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~s~~~-d~~~~~~~i~vwd~~~~~~~~~ 171 (368)
+..|++++ |+.|..+|..+++........ .... ..+. ......+ .++++... +. -.++.|+.||..+|+.+..
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~-~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKG-KVIIGNGGAEY-GVRGYITAYDAETGERKWR 205 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETT-EEEECCBCTTT-CCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECC-EEEEEeccccc-CCCCEEEEEECCCCcEEEE
Confidence 45666666 888999999888887665542 0000 0111 1112233 44443321 00 0128999999999999988
Q ss_pred Eec-CCc--------------------------------eeEEEEeeCccEEE---eCC-------------------cE
Q 017642 172 LSF-RSE--------------------------------VRSVKLRRDRIIVV---LEQ-------------------KI 196 (368)
Q Consensus 172 ~~~-~~~--------------------------------v~~~~~~~~~~~l~---~d~-------------------~i 196 (368)
+.. ... ...+++++++..+. .++ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 762 111 12467888766555 222 49
Q ss_pred EEEEcCCCeEEEEEeccCC---------CeeEEEEecCCCeEEEEeecCCCCeEEEEec-Ccceeeeeecc---------
Q 017642 197 FVYNFADLKLLHQIETIAN---------PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY-ASKRTKFIMAH--------- 257 (368)
Q Consensus 197 ~vwd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~--------- 257 (368)
..+|.++|+.+..++.... ....+....+|+..-+++.++.+|.+++++. +++.+..+...
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d 365 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYD 365 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEC
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccC
Confidence 9999999999888764221 1122333446642112223678999999554 44544333211
Q ss_pred --Ccce------------------------EEEEECCCCCEEEEEeC---------------------------------
Q 017642 258 --DSRI------------------------ACFALTQDGQLLATSST--------------------------------- 278 (368)
Q Consensus 258 --~~~i------------------------~~v~~sp~g~~l~s~~~--------------------------------- 278 (368)
..++ ..++++|++.++++...
T Consensus 366 ~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 445 (677)
T 1kb0_A 366 KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKF 445 (677)
T ss_dssp TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEE
T ss_pred CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccc
Confidence 0111 15688998887776543
Q ss_pred ----------CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 279 ----------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 279 ----------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
.|. |..||+.+++.+..+.. ..++....+..++.+++.++.||.+++||+++++..-
T Consensus 446 ~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~---~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw 512 (677)
T 1kb0_A 446 FNAEPPKSKPFGR-LLAWDPVAQKAAWSVEH---VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLW 512 (677)
T ss_dssp ECSSCCCSCCEEE-EEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cccccCCCCCccE-EEEEeCCCCcEEeecCC---CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceee
Confidence 167 99999999999888774 3345556677788888889999999999999998653
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.08 E-value=3.2e-08 Score=95.01 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=143.7
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcc-cCCc-eeEE-EEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEE
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFE-RGGG-IGVV-EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL 172 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~-~~~~-~~~~-~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~ 172 (368)
+..|++++ |+.|..+|.++++........ +... ..+. .-... ++.++++.+....-.++.|+.||..+|+.+..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 44666666 888999999888877665441 0000 0000 00112 344444432100001289999999999998877
Q ss_pred ec-C-C------------------------------ceeEEEEeeCccEEE---eCC-------------------cEEE
Q 017642 173 SF-R-S------------------------------EVRSVKLRRDRIIVV---LEQ-------------------KIFV 198 (368)
Q Consensus 173 ~~-~-~------------------------------~v~~~~~~~~~~~l~---~d~-------------------~i~v 198 (368)
.. . . ....+++++++.+++ .++ .|..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 52 1 0 012567888655555 233 3999
Q ss_pred EEcCCCeEEEEEeccCC---------CeeEEEEecCCCeE-EEEeecCCCCeEEEEec-Ccceeeeeecc----------
Q 017642 199 YNFADLKLLHQIETIAN---------PKGLCAVSQGVGSL-VLVCPGLQKGQVRVEHY-ASKRTKFIMAH---------- 257 (368)
Q Consensus 199 wd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~~-~l~~~g~~dg~i~i~~~-~~~~~~~~~~~---------- 257 (368)
||.++|+.+..++.... +.....+..+|+.. +++ .++.+|.+++++. +++.+......
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~-~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~ 358 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLM-QAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDM 358 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEE-ECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEET
T ss_pred EEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEE-EECCCCeEEEEECCCCCEeccccccccccccccCc
Confidence 99999999988764211 11222233355421 233 3778999999554 44443211100
Q ss_pred ------------------Cc-----------ceEEEEECCCCCEEEEEeC------------------------------
Q 017642 258 ------------------DS-----------RIACFALTQDGQLLATSST------------------------------ 278 (368)
Q Consensus 258 ------------------~~-----------~i~~v~~sp~g~~l~s~~~------------------------------ 278 (368)
.. .-..++|+|+..++++...
T Consensus 359 ~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (689)
T 1yiq_A 359 KTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGM 438 (689)
T ss_dssp TTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECC
T ss_pred cCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccc
Confidence 00 0113688888887776532
Q ss_pred ---------------CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 279 ---------------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 279 ---------------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
+|. |+.||+.+++.+..+..+ .++..-.+...+.+++.++.||.|+.||.++++..
T Consensus 439 ~p~~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 439 MPEGAEGLLEMAKSWSGK-LIAWDPVKQQAAWEVPYV---TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp CCSSHHHHHHHHTTCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCcccccCCCCCCCccee-EEEEECCCCCeEeEccCC---CCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 377 999999999998887752 23444466677889999999999999999999865
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.06 E-value=2e-08 Score=87.32 Aligned_cols=218 Identities=12% Similarity=0.016 Sum_probs=143.1
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-c
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-F 174 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~ 174 (368)
+..|.+++ ++++..+|.+ ++....... ....+..+....++.++++.. + +.|..+|.. ++.+..+. .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~---~~~~~~~~~~~~~g~l~vgt~-~-----~~l~~~d~~-g~~~~~~~~~ 175 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT---KKAIYATPIVSEDGTIYVGSN-D-----NYLYAINPD-GTEKWRFKTN 175 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC---SSCCCSCCEECTTSCEEEECT-T-----SEEEEECTT-SCEEEEEECS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC---CCceeeeeEEcCCCEEEEEcC-C-----CEEEEECCC-CCEeEEEecC
Confidence 34455566 7889999876 444433332 222333445565555555443 2 789999988 88777776 4
Q ss_pred CCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeee
Q 017642 175 RSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKF 253 (368)
Q Consensus 175 ~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~ 253 (368)
...+.++...+++.+.+ . +.|..+| .+++.+..+......+.++...+++. +++ ++.++.+..++.++..+..
T Consensus 176 ~~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v---~t~~~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 176 DAITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYV---TSLDGHLYAINPDGTEKWR 249 (330)
T ss_dssp SCCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEE---EETTTEEEEECTTSCEEEE
T ss_pred CCceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEE---EcCCCeEEEECCCCCEeEE
Confidence 55677788878888777 6 9999999 78877777765556677777777764 333 3346667666666666655
Q ss_pred eeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 254 IMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 254 ~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
+......+..+.+.+++. |..++.+|. |..+|. +++.+..+.. ....+.++....+|++ ..++.+|.+++...+
T Consensus 250 ~~~~~~~~~~~~~~~~g~-l~v~t~~gg-l~~~d~-~g~~~~~~~~--~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 250 FKTGKRIESSPVIGNTDT-IYFGSYDGH-LYAINP-DGTEKWNFET--GSWIIATPVIDENGTI-YFGTRNGKFYALFNL 323 (330)
T ss_dssp EECSSCCCSCCEECTTSC-EEEECTTCE-EEEECT-TSCEEEEEEC--SSCCCSCCEECTTCCE-EEECTTSCEEEEEC-
T ss_pred eeCCCCccccceEcCCCe-EEEecCCCC-EEEECC-CCcEEEEEEc--CCccccceEEcCCCEE-EEEcCCCeEEEEecc
Confidence 554444445566666665 666777878 999995 7777766664 3445677777778775 457889999988876
Q ss_pred CCCC
Q 017642 334 VNSG 337 (368)
Q Consensus 334 ~~~~ 337 (368)
..+.
T Consensus 324 ~~~~ 327 (330)
T 3hxj_A 324 EHHH 327 (330)
T ss_dssp ----
T ss_pred cccc
Confidence 5544
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.06 E-value=4.5e-07 Score=74.17 Aligned_cols=199 Identities=15% Similarity=0.180 Sum_probs=131.4
Q ss_pred EEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEE--EEeeCccEEE--eCCcEE
Q 017642 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSV--KLRRDRIIVV--LEQKIF 197 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~--~~~~~~~~l~--~d~~i~ 197 (368)
..+.|......-.+.|+++.++..++... ...|+.+|+.+++.+..+......... ++..+..+.+ .++.+.
T Consensus 13 ~~~phd~~~ftqGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~ 88 (243)
T 3mbr_X 13 KRYPHDTTAFTEGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGF 88 (243)
T ss_dssp EEEECCTTCCEEEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEE
T ss_pred EEcCCCCccccccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEE
Confidence 44555666777788999866665555431 248999999999999998855555444 4443333333 489999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEec-Ccceeeeeecc--C---cceEEEEECCCCC
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY-ASKRTKFIMAH--D---SRIACFALTQDGQ 271 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~--~---~~i~~v~~sp~g~ 271 (368)
+||.++++.+.++...... ..+.++++.+++. .| ++.|.+.+. +.+.+..+... . ..++.+.+. +|+
T Consensus 89 v~D~~tl~~~~ti~~~~~G---wglt~dg~~L~vS-dg--s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 89 VYDLATLTPRARFRYPGEG---WALTSDDSHLYMS-DG--TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEETTTTEEEEEEECSSCC---CEEEECSSCEEEE-CS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCcCcEEEEEeCCCCc---eEEeeCCCEEEEE-CC--CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 9999999999998754332 4455788775553 23 677887554 44555554432 1 245667765 677
Q ss_pred EEEEEeCCCcEEEEEECCCCceeEeeEecc-----------CcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
+++..-.+.. |.+.|.++++.+..+.... ...-.+.|+++|+++.|.+.+.-= =++|.++
T Consensus 162 lyanvw~s~~-I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w-p~~~~v~ 232 (243)
T 3mbr_X 162 LLANVWLTSR-IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW-PMLYEIR 232 (243)
T ss_dssp EEEEETTTTE-EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC-SEEEEEE
T ss_pred EEEEECCCCe-EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC-CcEEEEE
Confidence 6655545667 9999999999998877421 123568999999887766655321 2345544
No 229
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.05 E-value=1e-06 Score=74.22 Aligned_cols=215 Identities=5% Similarity=-0.086 Sum_probs=133.5
Q ss_pred CEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeC
Q 017642 87 TLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
.+..++|++++..|..+. .+.|.+++.+..... ..+. ........+++++ ++.++++.... +.|.+++.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~--~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~-----~~I~~~~~ 108 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT--TIIR-QDLGSPEGIALDHLGRTIFWTDSQL-----DRIEVAKM 108 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE--EEEC-TTCCCEEEEEEETTTTEEEEEETTT-----TEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE--EEEE-CCCCCccEEEEEecCCeEEEEECCC-----CEEEEEEc
Confidence 578899999877776666 556999998654332 2221 2223556777876 34444444443 78999997
Q ss_pred CCCcEEEEEe-cCCceeEEEEeeC-ccEEEe-----CCcEEEEEcCCCeEEEEEe-ccCCCeeEEEEecCCCeEEEEeec
Q 017642 164 HQSRCIGELS-FRSEVRSVKLRRD-RIIVVL-----EQKIFVYNFADLKLLHQIE-TIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 164 ~~~~~~~~~~-~~~~v~~~~~~~~-~~~l~~-----d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
.......... .......++++++ +.+.+. .+.|..+++. ++....+. ........++++++++.++++-
T Consensus 109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d-- 185 (267)
T 1npe_A 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVD-- 185 (267)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEE--
T ss_pred CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEE--
Confidence 6443322222 2256789999995 444442 3578888875 33333332 2233456789999988877664
Q ss_pred CCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecC
Q 017642 236 LQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSN 314 (368)
Q Consensus 236 ~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~ 314 (368)
...+.|.+.+..+.....+.........++.. +..|+.+. ..+. |.++|..+++.+..+..+. ......+++.|+
T Consensus 186 ~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~-v~~~d~~~g~~~~~i~~g~-~~~p~gi~~~~~ 261 (267)
T 1npe_A 186 AGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNS-VIAMDLAISKEMDTFHPHK-QTRLYGITIALS 261 (267)
T ss_dssp TTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTE-EEEEETTTTEEEEEECCSS-CCCCCCEEEECS
T ss_pred CCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCe-EEEEeCCCCCceEEEcccc-ccccceeeecCc
Confidence 34678888766654443332222334667664 44455454 4566 9999999999888876531 124677888887
Q ss_pred CC
Q 017642 315 AQ 316 (368)
Q Consensus 315 ~~ 316 (368)
+.
T Consensus 262 ~~ 263 (267)
T 1npe_A 262 QC 263 (267)
T ss_dssp CC
T ss_pred cC
Confidence 65
No 230
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.04 E-value=3.9e-08 Score=86.62 Aligned_cols=228 Identities=11% Similarity=0.085 Sum_probs=137.3
Q ss_pred cCCCCEEEEEeC------CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecC----------CCCCCCCCc
Q 017642 94 NQDHGCFAAGTD------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG----------PDPQYPLNK 157 (368)
Q Consensus 94 s~~g~~l~~~~d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~----------~d~~~~~~~ 157 (368)
.|+++.+.+... +.|.++|..+.+....... +. .. .+.+++++..++.++ .+ +.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~-~P--~va~spDG~~lyVan~~~~r~~~G~~~-----~~ 110 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GF-LP--NPVVADDGSFIAHASTVFSRIARGERT-----DY 110 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CS-SC--EEEECTTSSCEEEEEEEEEETTEEEEE-----EE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CC-CC--cEEECCCCCEEEEEcccccccccCCCC-----CE
Confidence 478887777652 3589999877666533332 22 22 377888776544332 23 67
Q ss_pred EEEEeCCCCcEEEEEecC--------CceeEEEEeeCccEEE---e--CCcEEEEEcCCCeEEEEEeccCCCeeEEEEec
Q 017642 158 VMIWDDHQSRCIGELSFR--------SEVRSVKLRRDRIIVV---L--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQ 224 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~---~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 224 (368)
|.+||..+++.+.++... .....++++|||+++. . ++.|.++|+.+++.+.++..... ..+.|
T Consensus 111 VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~----~~~~P 186 (386)
T 3sjl_D 111 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC----YHIFP 186 (386)
T ss_dssp EEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE----EEEEE
T ss_pred EEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc----ceeec
Confidence 999999999999988732 2567899999999766 2 57899999999999988854321 11223
Q ss_pred CCCeEEEEeecCCCCeEEEEec-C-cceee----eeeccCcceE-EEEE-CCCCCEEEEEeCCCcEEEEEECCCCc--ee
Q 017642 225 GVGSLVLVCPGLQKGQVRVEHY-A-SKRTK----FIMAHDSRIA-CFAL-TQDGQLLATSSTKGTLVRIFNTLDGT--LL 294 (368)
Q Consensus 225 ~~~~~~l~~~g~~dg~i~i~~~-~-~~~~~----~~~~~~~~i~-~v~~-sp~g~~l~s~~~dg~~i~iwd~~~~~--~~ 294 (368)
.+...+++. +.||.+.+.+. . ++... .+.....++. ...| .++|++++ .+.+|. |.+.|+.+.. .+
T Consensus 187 ~g~~~~~~~--~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~v~ 262 (386)
T 3sjl_D 187 TAPDTFFMH--CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAKFL 262 (386)
T ss_dssp EETTEEEEE--ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCEEC
T ss_pred CCCceeEEE--CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcceee
Confidence 332222222 23555444222 2 12111 1111112222 2355 36786554 555788 9999987654 33
Q ss_pred EeeE--------eccCcccEEEEEEecCCCEEEEEeC----------CCeEEEEEccCCCCCC
Q 017642 295 QEVR--------RGADRAEIYSLAFSSNAQWLAVSSD----------KGTVHVFNLKVNSGSA 339 (368)
Q Consensus 295 ~~~~--------~~~~~~~v~~l~~sp~~~~l~s~s~----------dg~i~iwd~~~~~~~~ 339 (368)
..+. .+...+....++++++++.|+.... .+.|.++|+.+.+...
T Consensus 263 ~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~ 325 (386)
T 3sjl_D 263 PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA 325 (386)
T ss_dssp CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE
T ss_pred cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEE
Confidence 3332 1111234455788999998877642 2579999999887654
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.02 E-value=3.5e-07 Score=76.29 Aligned_cols=191 Identities=10% Similarity=-0.042 Sum_probs=126.2
Q ss_pred CEEEEEEcCCCCEEEEEe---CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 87 TLLHISFNQDHGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
....++|++++.++++.+ ++.|+++|+.+++......+ ........+.+.++.++.++.. + +.+.++|.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~~g~~lyv~t~~-~-----~~v~viD~ 93 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTLLNEKLYQVVWL-K-----NIGFIYDR 93 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEETT-C-----SEEEEEET
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEEeCCEEEEEEec-C-----CEEEEEEC
Confidence 357899999876555543 35699999998877655444 2333344567777766666643 3 89999999
Q ss_pred CCCcEEEEEecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCC-----CeeEEEEecCCCeEEEEeec
Q 017642 164 HQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIAN-----PKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 164 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~g 235 (368)
.+.+.+.++... .-....+++|+..++ .++.|.++|.++.+.+..+..... ..+.+.+. ++ .+++. .
T Consensus 94 ~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn--~ 168 (266)
T 2iwa_A 94 RTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWAN--I 168 (266)
T ss_dssp TTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEE--E
T ss_pred CCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEe--c
Confidence 999999998754 112344566766554 467899999999988888764321 24566777 55 44433 2
Q ss_pred CCCCeEEE-EecCcceeeeeecc-------------CcceEEEEECCCCCEEE-EEeCCCcEEEEEECCCC
Q 017642 236 LQKGQVRV-EHYASKRTKFIMAH-------------DSRIACFALTQDGQLLA-TSSTKGTLVRIFNTLDG 291 (368)
Q Consensus 236 ~~dg~i~i-~~~~~~~~~~~~~~-------------~~~i~~v~~sp~g~~l~-s~~~dg~~i~iwd~~~~ 291 (368)
..++.|.+ +..+++.+..+... ......|+|+|+++.|+ ++...+. |.+.++...
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~~ 238 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHLV 238 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEEC
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEecc
Confidence 34566666 66666666665421 13568999999987554 5555666 777776543
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=3.9e-07 Score=75.17 Aligned_cols=186 Identities=10% Similarity=0.072 Sum_probs=124.9
Q ss_pred EEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeE--EEEeeCccEEE--eCCcEE
Q 017642 122 RDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRS--VKLRRDRIIVV--LEQKIF 197 (368)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~--~d~~i~ 197 (368)
..+.+........+.|+.+.++..++.. |.|+++|+++++.+..+ ....... +++..+..+++ .++.+.
T Consensus 47 ~~~phd~~~ftqGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 47 REYPHATNAFTQGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEECCTTCCEEEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEcCCCccccceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 3444455566677888876655555544 78999999999988887 5555544 55555544555 489999
Q ss_pred EEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEec-Ccceeeeeec--cC---cceEEEEECCCCC
Q 017642 198 VYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY-ASKRTKFIMA--HD---SRIACFALTQDGQ 271 (368)
Q Consensus 198 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~--~~---~~i~~v~~sp~g~ 271 (368)
+||.++++.+.++...... ..++++++.+++. .| ++.|.+.+. +.+.+..+.. +. ..++.+.|. +|+
T Consensus 120 V~D~~Tl~~~~ti~~~~eG---wGLt~Dg~~L~vS-dG--s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 120 TWSGMPPQRERTTRYSGEG---WGLCYWNGKLVRS-DG--GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEETTTTEEEEEEECSSCC---CCEEEETTEEEEE-CS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCcCcEEEEEeCCCce---eEEecCCCEEEEE-CC--CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 9999999999998754322 3444678765543 23 678888554 4455555443 22 235667776 776
Q ss_pred EEEEEeCCCcEEEEEECCCCceeEeeEecc-----------CcccEEEEEEecCCCEEEEEe
Q 017642 272 LLATSSTKGTLVRIFNTLDGTLLQEVRRGA-----------DRAEIYSLAFSSNAQWLAVSS 322 (368)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~sp~~~~l~s~s 322 (368)
+++..-.+.. |.+.|.++++.+..+.... ...-.+.|+|+|+++.|++.+
T Consensus 193 lyanvw~s~~-I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 193 IYANIWHSSD-VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEETTCSE-EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCe-EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 5555545667 9999999999988877420 113568999999876555544
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=8.6e-07 Score=76.96 Aligned_cols=236 Identities=9% Similarity=0.027 Sum_probs=140.8
Q ss_pred EEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEccc----------------CCceeEEEEEEeC-CeEEEEecCC
Q 017642 88 LLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFER----------------GGGIGVVEMLFRC-NILALVGGGP 149 (368)
Q Consensus 88 v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~~s~~~ 149 (368)
..+++|.++|+++.++. ++.|..|+.+............ ........+++++ ++.++++...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 45678899998666666 6778888866433221110000 0012467788886 5655555333
Q ss_pred CCCCCCCcEEEEeCCCCcEEEEEe-----cCCceeEEEEee-CccEEEeC--------------------CcEEEEEcCC
Q 017642 150 DPQYPLNKVMIWDDHQSRCIGELS-----FRSEVRSVKLRR-DRIIVVLE--------------------QKIFVYNFAD 203 (368)
Q Consensus 150 d~~~~~~~i~vwd~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~d--------------------~~i~vwd~~~ 203 (368)
+.|..+|..+++...... .......+++.+ +|.+.+.| +.|..||..+
T Consensus 101 ------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 101 ------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp ------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred ------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 458888876554222111 113468899999 88877732 5688899877
Q ss_pred CeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc---eeeeeeccCcceEEEEECCCCCEEEEEeC--
Q 017642 204 LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK---RTKFIMAHDSRIACFALTQDGQLLATSST-- 278 (368)
Q Consensus 204 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~v~~sp~g~~l~s~~~-- 278 (368)
++....... ......++++++++.++++- ...+.|.+++..+. ....+....+ ...++++++|+++++...
T Consensus 175 ~~~~~~~~~-~~~p~gia~~~dg~~lyv~d--~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 175 KETTLLLKE-LHVPGGAEVSADSSFVLVAE--FLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp TEEEEEEEE-ESCCCEEEECTTSSEEEEEE--GGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEET
T ss_pred CEEEEeccC-CccCcceEECCCCCEEEEEe--CCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcc
Confidence 765433322 22345689999998766653 24567777555431 1222222223 788999999996666544
Q ss_pred --------CCcEEEEEECCCCceeEeeEeccC--cccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 279 --------KGTLVRIFNTLDGTLLQEVRRGAD--RAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 279 --------dg~~i~iwd~~~~~~~~~~~~~~~--~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
.+. |..+|. .++.+..+..... -..+..+++ .+++++++....+.|.++++....
T Consensus 251 ~~~~~~~~~~~-v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 251 DGNMHGRVDPK-GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp TSSTTSCEEEE-EEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred cccccCCCccE-EEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 456 888885 5777766664210 134666766 466666665678889999986443
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=3.4e-08 Score=86.75 Aligned_cols=200 Identities=10% Similarity=0.001 Sum_probs=125.4
Q ss_pred eeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe--------cCCceeEEEEeeCccEEEe--------C
Q 017642 130 IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS--------FRSEVRSVKLRRDRIIVVL--------E 193 (368)
Q Consensus 130 ~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~--------d 193 (368)
.....+++++++.++++.... .++.++||.+.+++. ..+. +-..+..+++++++++++. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~---~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQF---YQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGG---GCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCC---CCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 456778888887777764310 013244554445543 3221 3357899999999987763 3
Q ss_pred CcEEEEEcCCCeEEEEEeccC------CCeeEEEEecCCCeEEEEeec-CCCCeEEEEecCc-ceeeeeecc--------
Q 017642 194 QKIFVYNFADLKLLHQIETIA------NPKGLCAVSQGVGSLVLVCPG-LQKGQVRVEHYAS-KRTKFIMAH-------- 257 (368)
Q Consensus 194 ~~i~vwd~~~~~~~~~~~~~~------~~v~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~-~~~~~~~~~-------- 257 (368)
+.|.+||+.+++.++.+.... .....+++.+++..++++-.+ ..++.|.+++... +....+..|
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 689999999998777765321 235778999876665554311 0467787776543 332222221
Q ss_pred ---------------------CcceEEEEECCCCCEEEEEeCCCcEEEEEECC---CCc-----eeE--eeEeccCcccE
Q 017642 258 ---------------------DSRIACFALTQDGQLLATSSTKGTLVRIFNTL---DGT-----LLQ--EVRRGADRAEI 306 (368)
Q Consensus 258 ---------------------~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~---~~~-----~~~--~~~~~~~~~~v 306 (368)
...+..|+|+|+|+.|+.+..++..|..++.. .+. ... ...+ +.+..
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--~~g~p 250 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS--EKPIC 250 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE--ECCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc--cCCCC
Confidence 12368899999999888888777525555432 111 011 1111 23345
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 307 YSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 307 ~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
..++++++|.++++...++.|.+||.+++
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G 279 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADR 279 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTT
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCC
Confidence 67999999999998888999999998444
No 235
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.95 E-value=1.8e-10 Score=102.40 Aligned_cols=168 Identities=12% Similarity=0.015 Sum_probs=92.7
Q ss_pred CcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCCC-ee-EEEEecCCCeEE
Q 017642 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIANP-KG-LCAVSQGVGSLV 230 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~-v~-~~~~~~~~~~~~ 230 (368)
+.|+.||..+|+.+..+.. +.+.+..+..++.+++ .|+.|+.||.++|+.+..+..+... +. ...+. ++..
T Consensus 19 g~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~~-- 94 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDGI-- 94 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC--------
T ss_pred CEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCCE--
Confidence 8999999999999988876 5666665666775544 5899999999999877665432111 11 11111 2232
Q ss_pred EEeecCCCCeEEEEecC-cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEE
Q 017642 231 LVCPGLQKGQVRVEHYA-SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (368)
++ .|+.++.++.++.. ++.+..+..+. ...++|++..|++++.|+. |+.||.++|+.+..+.... ....
T Consensus 95 v~-~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~~~----~~~~ 164 (369)
T 2hz6_A 95 LY-MGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTRELRWNATYFD----YAAS 164 (369)
T ss_dssp CC-CCEEEEEEEEECCC--------------------------EEEEEEEEE-EECCCSSSSSCCCEEEEEE----ECCB
T ss_pred EE-EEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCCCEEEeEeccc----ccCc
Confidence 22 36678888887655 55555554443 2345678888999999999 9999999999877665321 1223
Q ss_pred EEecCC---CEEEEEeCCCeEEEEEccCCCC
Q 017642 310 AFSSNA---QWLAVSSDKGTVHVFNLKVNSG 337 (368)
Q Consensus 310 ~~sp~~---~~l~s~s~dg~i~iwd~~~~~~ 337 (368)
.+..+. ..+++++.||.|+.||.++++.
T Consensus 165 ~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 165 LPEDDVDYKMSHFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp CCCCCTTCCCCEEEEETSCEEEEECTTTCCE
T ss_pred cccCCccccceEEEECCCCEEEEEECCCCcE
Confidence 344432 4566788899999999988865
No 236
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.94 E-value=1.6e-06 Score=76.96 Aligned_cols=223 Identities=10% Similarity=0.077 Sum_probs=132.9
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccC-------CceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcE
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERG-------GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC 168 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~ 168 (368)
+..|.+++ ++.|..||.++++......+... ............+.+++.+. + +.|..+|..+|+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--~-----g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--K-----AQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--T-----SEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--C-----CEEEEEECCCCCE
Confidence 44555555 77899999888877766554210 11122334444555544443 2 8999999999999
Q ss_pred EEEEecCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCe-----eEEEEecCCCeEEEEeecCCCCeE
Q 017642 169 IGELSFRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPK-----GLCAVSQGVGSLVLVCPGLQKGQV 241 (368)
Q Consensus 169 ~~~~~~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~l~~~g~~dg~i 241 (368)
+..+.....+.......++.+++ .++.|+.+|.++|+.+..+....... ....+. +..++ + +..++.+
T Consensus 126 ~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~--~-g~~~g~l 200 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAV--V-GGDNGRV 200 (376)
T ss_dssp EEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEE--E-CCTTTEE
T ss_pred EEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEE--E-EcCCCEE
Confidence 88777443333222223555555 58899999999999888775432211 122222 23322 2 5567877
Q ss_pred EEEec-CcceeeeeeccCc----ceEE---EEECC--CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEE
Q 017642 242 RVEHY-ASKRTKFIMAHDS----RIAC---FALTQ--DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF 311 (368)
Q Consensus 242 ~i~~~-~~~~~~~~~~~~~----~i~~---v~~sp--~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 311 (368)
..++. +++.+........ .+.. +.-.| .+..++.++.++. |..+|..+++.+..... .....+..
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~----~~~~~~~~ 275 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKREL----GSVNDFIV 275 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECC----CCEEEEEE
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccC----CCCCCceE
Confidence 77554 4554444332110 0000 00111 2456777888888 99999999998866553 22344443
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 312 SSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 312 sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
++..|+.++.++.|..+|..+++..
T Consensus 276 --~~~~l~~~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 276 --DGNRIYLVDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp --ETTEEEEEETTCCEEEEETTTCCEE
T ss_pred --ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 3567777888999999999888753
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.94 E-value=5.4e-10 Score=99.27 Aligned_cols=183 Identities=13% Similarity=0.051 Sum_probs=91.8
Q ss_pred CCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEec
Q 017642 96 DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSF 174 (368)
Q Consensus 96 ~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~ 174 (368)
++..|++++ |+.|+.||..+++....... ..+.+.....++..++.++.| +.|+.||..+|+.+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLTKLPF 77 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTT-----CCEEEC-----CCSEECSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCC-----CEEEEEECCCCceeeeeec
Confidence 466777777 88899999988887755443 112222222345445555555 9999999999987766642
Q ss_pred C--Ccee-EEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-c
Q 017642 175 R--SEVR-SVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-S 248 (368)
Q Consensus 175 ~--~~v~-~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~ 248 (368)
. ..+. ...+..++.+++ .++.|+.||.++|+.+..+..+. ...++|+++.+++ ++.++.|+.|+.. +
T Consensus 78 ~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~---~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 78 TIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYL---GRTEYTITMYDTKTR 150 (369)
T ss_dssp CHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------------------EEE---EEEEEEEECCCSSSS
T ss_pred cCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEE---EecCCEEEEEECCCC
Confidence 1 1111 111113444443 58899999999999888776543 2345566654333 4568888887754 4
Q ss_pred ceeeeeeccCcceEEEEECCCC---CEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 249 KRTKFIMAHDSRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 249 ~~~~~~~~~~~~i~~v~~sp~g---~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
+.+..+..+. .....+..+. ..+++++.||. |+.||..+|+.+..+.
T Consensus 151 ~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 151 ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQN 200 (369)
T ss_dssp SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEEE
T ss_pred CEEEeEeccc--ccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEec
Confidence 4444433221 1223334332 45677888999 9999999999877765
No 238
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.91 E-value=1.6e-07 Score=80.96 Aligned_cols=196 Identities=9% Similarity=-0.038 Sum_probs=121.8
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEE-EcccCCceeEEEEEEeCCeEEEEec----CCC-----
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRR-DFERGGGIGVVEMLFRCNILALVGG----GPD----- 150 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~----~~d----- 150 (368)
..+...+..++++++|+++++.. +++|.+|+.+ ++..... .........+.++.+++++.++++. ..+
T Consensus 82 ~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~ 160 (305)
T 3dr2_A 82 LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGC 160 (305)
T ss_dssp EESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSC
T ss_pred eCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccc
Confidence 34556789999999999776655 5679999865 3322111 1110011224467888888777752 110
Q ss_pred ---CCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---eC------CcEEEEEcCCCeEE--EEE-eccCC
Q 017642 151 ---PQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---LE------QKIFVYNFADLKLL--HQI-ETIAN 215 (368)
Q Consensus 151 ---~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d------~~i~vwd~~~~~~~--~~~-~~~~~ 215 (368)
.....+.|..||..+++..... .......++|+||++.+. .. +.|++||+..+... ..+ .....
T Consensus 161 ~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~ 239 (305)
T 3dr2_A 161 PADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDG 239 (305)
T ss_dssp CCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSS
T ss_pred ccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCC
Confidence 0001156888887777654443 445568899999998554 22 68999998755411 111 11223
Q ss_pred CeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEE
Q 017642 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFN 287 (368)
Q Consensus 216 ~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd 287 (368)
....+++.++|+ ++++ ..+ .|.+++.+++.+..+..+. .+.+++|.++++.|+.++.++ +..++
T Consensus 240 ~pdgi~~d~~G~-lwv~---~~~-gv~~~~~~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~--l~~~~ 303 (305)
T 3dr2_A 240 LPDGFCVDRGGW-LWSS---SGT-GVCVFDSDGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC--LWMLP 303 (305)
T ss_dssp CCCSEEECTTSC-EEEC---CSS-EEEEECTTSCEEEEEECSS-CCCEEEECTTSCEEEEEETTE--EEEEE
T ss_pred CCCeEEECCCCC-EEEe---cCC-cEEEECCCCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe--EEEEE
Confidence 345688888887 3332 234 4777888887777776555 588999999998888877765 44444
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.89 E-value=1.5e-06 Score=77.27 Aligned_cols=190 Identities=12% Similarity=0.081 Sum_probs=121.7
Q ss_pred CeEEEEecCCCCCCCCCcEEEEeCCCC----cEEEEEe-------cC-CceeEEEEeeCccEEE--eC------CcEEEE
Q 017642 140 NILALVGGGPDPQYPLNKVMIWDDHQS----RCIGELS-------FR-SEVRSVKLRRDRIIVV--LE------QKIFVY 199 (368)
Q Consensus 140 ~~~~~~s~~~d~~~~~~~i~vwd~~~~----~~~~~~~-------~~-~~v~~~~~~~~~~~l~--~d------~~i~vw 199 (368)
...+++.+..+ +.|.++|+.+. +.+++++ .. ..-..+.+.|+|.++. .+ +.|.++
T Consensus 95 r~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 95 RRFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILML 169 (462)
T ss_dssp SCEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEE
T ss_pred CCEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEE
Confidence 34455666665 89999998765 6666662 11 2456778889993333 23 689999
Q ss_pred EcCCCeEEEEEeccCCC---eeEEEEecCCCeEEEEeec----------------CCCCeEEEEecCcc-eeeeeecc--
Q 017642 200 NFADLKLLHQIETIANP---KGLCAVSQGVGSLVLVCPG----------------LQKGQVRVEHYASK-RTKFIMAH-- 257 (368)
Q Consensus 200 d~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~l~~~g----------------~~dg~i~i~~~~~~-~~~~~~~~-- 257 (368)
|.++++.+.++.....+ -..+.|+|+++.++..--| .....|.+|+.... .+.++...
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 99999999888643222 2347789999853321000 23688999887654 34444431
Q ss_pred CcceEEEEE--CCCCCEEEEEeC------CCcEEEEEECCCCce--eEeeEeccC----------------cccEEEEEE
Q 017642 258 DSRIACFAL--TQDGQLLATSST------KGTLVRIFNTLDGTL--LQEVRRGAD----------------RAEIYSLAF 311 (368)
Q Consensus 258 ~~~i~~v~~--sp~g~~l~s~~~------dg~~i~iwd~~~~~~--~~~~~~~~~----------------~~~v~~l~~ 311 (368)
......|.| +|++++++++++ ++. |.+|....++. .+.+..... ......|.+
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~-V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSS-IWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEE-EEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCce-EEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 123456656 999998887775 445 87776554421 111110000 134678999
Q ss_pred ecCCCEEEEEe-CCCeEEEEEccCC
Q 017642 312 SSNAQWLAVSS-DKGTVHVFNLKVN 335 (368)
Q Consensus 312 sp~~~~l~s~s-~dg~i~iwd~~~~ 335 (368)
|+||++|.++. ..+.|.+||+...
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSST
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCC
Confidence 99999998776 4689999999744
No 240
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.86 E-value=4.1e-06 Score=69.12 Aligned_cols=184 Identities=8% Similarity=0.049 Sum_probs=121.2
Q ss_pred EEEEEEcCCCCEEEEEe-CC--eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 88 LLHISFNQDHGCFAAGT-DH--GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 88 v~~~~~s~~g~~l~~~~-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
...+.|+ ++.++.+.+ ++ .|+++|+++++......+ ........+....+.++.++... +.+.+||..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~~g~~ly~ltw~~------~~v~v~D~~ 115 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISDWKDKIVGLTWKN------GLGFVWNIR 115 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSS------SEEEEEETT
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEEeCCEEEEEEeeC------CEEEEEECc
Confidence 4778898 666555555 54 599999998887765555 33444455667788777776543 899999999
Q ss_pred CCcEEEEEecCCceeEEEEeeCccEEE-eC--CcEEEEEcCCCeEEEEEeccC-----CCeeEEEEecCCCeEEEEeecC
Q 017642 165 QSRCIGELSFRSEVRSVKLRRDRIIVV-LE--QKIFVYNFADLKLLHQIETIA-----NPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 165 ~~~~~~~~~~~~~v~~~~~~~~~~~l~-~d--~~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
+.+.+.++.....-..++ +|+..++ +| +.|.++|.++.+.+..+.... ..++.+.+. +| .+++.. .
T Consensus 116 t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~--w 189 (262)
T 3nol_A 116 NLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG-EIFANV--W 189 (262)
T ss_dssp TCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT-EEEEEE--T
T ss_pred cCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC-EEEEEE--c
Confidence 999999998544333444 5665555 44 569999999998888875432 223346665 55 444332 3
Q ss_pred CCCeEEE-EecCcceeeeeecc------------CcceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 237 QKGQVRV-EHYASKRTKFIMAH------------DSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 237 ~dg~i~i-~~~~~~~~~~~~~~------------~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
.+..|.+ +..+++.+..+... ....+.|+|+|+++.|+..+..-- ++|.+
T Consensus 190 ~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp--~~~ev 252 (262)
T 3nol_A 190 QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWP--KVFEI 252 (262)
T ss_dssp TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCS--EEEEE
T ss_pred cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCC--ceEEE
Confidence 4556655 65566655554321 235689999999988887776654 55543
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.84 E-value=3.3e-06 Score=74.88 Aligned_cols=218 Identities=11% Similarity=0.037 Sum_probs=130.8
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecC
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFR 175 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~ 175 (368)
+..+.+++ ++.|..+|.++++......+. .. . ........+ .+++... + +.|..+|..+|+.+..+...
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~-~~-~-~~~p~~~~~-~v~v~~~-~-----g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVA-GE-A-LSRPVVSDG-LVLIHTS-N-----GQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECS-SC-C-CSCCEEETT-EEEEECT-T-----SEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCC-Cc-e-EcCCEEECC-EEEEEcC-C-----CeEEEEECCCCcEEEEEeCC
Confidence 44555555 778999999888877655542 11 1 111122333 3444333 3 89999999999998887743
Q ss_pred Cce------eEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCC----------e-eEEEEecCCCeEEEEeecC
Q 017642 176 SEV------RSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANP----------K-GLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 176 ~~v------~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~~l~~~g~ 236 (368)
..+ ...... ++.+++ .++.|..+|.++|+.+......... + ....+ .+..+++ ++
T Consensus 173 ~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~---~~ 246 (376)
T 3q7m_A 173 MPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFA---LA 246 (376)
T ss_dssp C-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEE---EC
T ss_pred CCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEE---Ee
Confidence 333 222222 555555 4789999999999988776532110 1 11111 2333332 34
Q ss_pred CCCeEEEEec-CcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCC
Q 017642 237 QKGQVRVEHY-ASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNA 315 (368)
Q Consensus 237 ~dg~i~i~~~-~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~ 315 (368)
.++.+..++. +++.+.... ......+.. ++..|+.++.++. |..+|..+++.+...... ....+..... .+
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~~~~-~~~~~~~~~~--~~ 318 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQSDL-LHRLLTSPVL--YN 318 (376)
T ss_dssp TTSCEEEEETTTCCEEEEEC--CCCEEEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEECTT-TTSCCCCCEE--ET
T ss_pred cCcEEEEEECCCCcEEeecc--CCCCCCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEeeccc-CCCcccCCEE--EC
Confidence 5777777554 455443332 223344444 4567788888888 999999999987666521 1122223333 24
Q ss_pred CEEEEEeCCCeEEEEEccCCCCC
Q 017642 316 QWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 316 ~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
..|+.++.+|.|+++|.++++..
T Consensus 319 ~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 319 GNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEE
Confidence 67888889999999999988754
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.84 E-value=2e-06 Score=79.17 Aligned_cols=173 Identities=12% Similarity=0.054 Sum_probs=118.6
Q ss_pred CcEEEEeCCCCcEEEEEe--cCCceeEEEE-e-eCccEEE-e--------------------CCcEEEEEcCCCeEEEEE
Q 017642 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKL-R-RDRIIVV-L--------------------EQKIFVYNFADLKLLHQI 210 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~-~-~~~~~l~-~--------------------d~~i~vwd~~~~~~~~~~ 210 (368)
+.|.+.|+.+.++...+. .......+++ + |++.+++ . ++.+.++|..+++...++
T Consensus 112 ~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI 191 (595)
T 1fwx_A 112 TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQV 191 (595)
T ss_dssp TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEE
Confidence 789999999999888555 4567889998 4 8888776 2 247999999999998888
Q ss_pred eccCCCeeEEEEecCCCeEEEEeecCCC------------Ce-----------------------EEEEecCc---ce-e
Q 017642 211 ETIANPKGLCAVSQGVGSLVLVCPGLQK------------GQ-----------------------VRVEHYAS---KR-T 251 (368)
Q Consensus 211 ~~~~~~v~~~~~~~~~~~~~l~~~g~~d------------g~-----------------------i~i~~~~~---~~-~ 251 (368)
.... .-..++++++|+..++.+-.+.. .. |.+.+... .. +
T Consensus 192 ~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~ 270 (595)
T 1fwx_A 192 LVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFT 270 (595)
T ss_dssp EESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSE
T ss_pred EeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeE
Confidence 6544 34558899999987665522211 11 22211111 11 1
Q ss_pred eeeeccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCc------------eeEeeEeccCcccEEEEEEecCCCEE
Q 017642 252 KFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGT------------LLQEVRRGADRAEIYSLAFSSNAQWL 318 (368)
Q Consensus 252 ~~~~~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~------------~~~~~~~~~~~~~v~~l~~sp~~~~l 318 (368)
..+.. .....++.++|||+++++++. +.. |.++|+.+.+ .+.++.. ......++|+++|...
T Consensus 271 ~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~-VsVid~~~~~~~~~~~l~~~~~v~~~v~v---G~gP~h~aF~~dG~aY 345 (595)
T 1fwx_A 271 RYIPI-ANNPHGCNMAPDKKHLCVAGKLSPT-VTVLDVTRFDAVFYENADPRSAVVAEPEL---GLGPLHTAFDGRGNAY 345 (595)
T ss_dssp EEEEE-ESSCCCEEECTTSSEEEEECTTSSB-EEEEEGGGHHHHHHSCCCGGGGEEECCBC---CSCEEEEEECTTSEEE
T ss_pred EEEec-CCCceEEEEcCCCCEEEEeCCCCCe-EEEEECcccccccccccCcccceEEEcCC---CCCcceEEECCCCeEE
Confidence 12221 123467899999997776664 566 9999998653 3444443 3467899999999444
Q ss_pred EEEeCCCeEEEEEccC
Q 017642 319 AVSSDKGTVHVFNLKV 334 (368)
Q Consensus 319 ~s~s~dg~i~iwd~~~ 334 (368)
++.-.|+.|.+||+++
T Consensus 346 ~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 346 TSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEETTTTEEEEEEHHH
T ss_pred EEEecCCcEEEEEhhH
Confidence 4556899999999987
No 243
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.83 E-value=1.2e-06 Score=78.48 Aligned_cols=201 Identities=18% Similarity=0.108 Sum_probs=122.8
Q ss_pred EEEEcCCCCEEEEEe-----------CCeEEEEEecCCCcceEEEcccCC----ceeEEEEEEeCCeEEEEecC--CCCC
Q 017642 90 HISFNQDHGCFAAGT-----------DHGFRIYNCDPFREIFRRDFERGG----GIGVVEMLFRCNILALVGGG--PDPQ 152 (368)
Q Consensus 90 ~~~~s~~g~~l~~~~-----------d~~i~iw~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~s~~--~d~~ 152 (368)
.++++|||++|+++. ++.|.++|..+.+......+.... ...-..+.+++++..++.+. .+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~-- 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPA-- 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSS--
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCC--
Confidence 789999999887764 345999998877665443331000 11223567777775554432 23
Q ss_pred CCCCcEEEEeCCCCcEEEEEecCCc--------eeEEEEeeCccEEE---------------------------------
Q 017642 153 YPLNKVMIWDDHQSRCIGELSFRSE--------VRSVKLRRDRIIVV--------------------------------- 191 (368)
Q Consensus 153 ~~~~~i~vwd~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~--------------------------------- 191 (368)
+.|.+.|+.+++.+.++...+. -.-+.++++|++++
T Consensus 200 ---~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 200 ---PAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp ---CEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred ---CeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 7899999999998888763221 11133444444332
Q ss_pred -------eCCcEEEEEcCCCeEE--EEEec----------cCCCeeEEEEecCCCeEEEEeecC-------CCCeEEE-E
Q 017642 192 -------LEQKIFVYNFADLKLL--HQIET----------IANPKGLCAVSQGVGSLVLVCPGL-------QKGQVRV-E 244 (368)
Q Consensus 192 -------~d~~i~vwd~~~~~~~--~~~~~----------~~~~v~~~~~~~~~~~~~l~~~g~-------~dg~i~i-~ 244 (368)
..+.|.+.|+...... ..+.. .......++++++++.++++.... ..+.|.+ +
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 1233444444322210 11100 001112378899999877764211 1346777 4
Q ss_pred ecCcceeeeeeccCcceEEEEECCCCC-EEEEEe-CCCcEEEEEECCCCceeEee
Q 017642 245 HYASKRTKFIMAHDSRIACFALTQDGQ-LLATSS-TKGTLVRIFNTLDGTLLQEV 297 (368)
Q Consensus 245 ~~~~~~~~~~~~~~~~i~~v~~sp~g~-~l~s~~-~dg~~i~iwd~~~~~~~~~~ 297 (368)
..+.+.+..+.... ....|+|+|||+ ++++.. .++. |.|+|+.+++.+.++
T Consensus 357 ~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~-VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQT-LHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTE-EEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCe-EEEEECCCCCEEEEe
Confidence 45556666665322 478999999999 888888 4788 999999999999887
No 244
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.83 E-value=7.1e-06 Score=80.38 Aligned_cols=235 Identities=11% Similarity=0.153 Sum_probs=147.3
Q ss_pred EEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCc
Q 017642 88 LLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (368)
Q Consensus 88 v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~ 167 (368)
|.++...++|.+.+...++++..|+....+.. ..........+.++..+.++.+.++... +.|.+||..+++
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~--~~~~~~~~~~i~~i~~d~~g~lwigt~~------~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFE--KVIPILGTKQIQAILQQSPTRIWVATEG------AGLFLINPKTKE 246 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEE--ECC----CCCEEEEEEEETTEEEEEEBS------SCEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEE--EecCCCCCCeeEEEEEcCCCCEEEEECC------CCeEEEeCCCCe
Confidence 88888888887666433568999986654322 1111122345677777666655555432 459999987765
Q ss_pred EEEEEe--------cCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEec-------cCCCeeEEEEecCCCeEEE
Q 017642 168 CIGELS--------FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIET-------IANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 168 ~~~~~~--------~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~l 231 (368)
...... ....|.++...++|.+.+ .++.|.+||..+++....... ....|.++....+|. +.+
T Consensus 247 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWi 325 (795)
T 4a2l_A 247 IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWL 325 (795)
T ss_dssp EEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEE
T ss_pred EEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEE
Confidence 433221 135689999998888777 556899999887765433211 224577777777775 333
Q ss_pred EeecCCCCeEEEEecCcceeeeeec-------cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe-----
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIMA-------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR----- 299 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~~-------~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~----- 299 (368)
|+.++-|..++........+.. ....|.++....+|.+ ..|+.++. |..||..+++...-...
T Consensus 326 ---gt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~G-l~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 326 ---GTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGG-LNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp ---EESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSC-EEEECTTTCCEEEECCC-----
T ss_pred ---EECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCC-eEEEcCCCCcEEEEecCCCCcc
Confidence 3355556665544433332221 2346999999888874 45777767 99999877654422111
Q ss_pred -ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 300 -GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 300 -~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
......|.++...++|+.|..|+.++.|.+||.++++
T Consensus 401 ~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 401 RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp -CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 0123579999998899855667777779999987654
No 245
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.79 E-value=4.6e-05 Score=66.78 Aligned_cols=239 Identities=8% Similarity=-0.039 Sum_probs=142.0
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
.+...|.+..+ ..+|+.+..+.|+..+++..... ..+ ........+.|++ ++.++++.... +.|+.+++
T Consensus 33 ~d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~--~~~--~~~~~~~~l~~d~~~~~ly~~D~~~-----~~I~r~~~ 102 (349)
T 3v64_C 33 PDRRSCKALGP-EPVLLFANRIDIRQVLPHRSEYT--LLL--NNLENAIALDFHHRRELVFWSDVTL-----DRILRANL 102 (349)
T ss_dssp TTSSCEEESSS-CCEEEEECBSCEEEECTTSCCEE--EEE--CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEET
T ss_pred CCCCccccccc-CceeEeecccceEEEeCCCCeeE--Eee--cCCCceEEEEEeccccEEEEEeccC-----CceEEEec
Confidence 34455666556 34566666666777776543322 223 2333467788874 44444444433 88999998
Q ss_pred CCCcEEEEEe-cCCceeEEEEeeCc-cEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCC
Q 017642 164 HQSRCIGELS-FRSEVRSVKLRRDR-IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (368)
Q Consensus 164 ~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~d 238 (368)
..+.....+. .......+++.+.+ .+.+ ..+.|.+.++........+.........+++.|.+..++++-.+ ..
T Consensus 103 ~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~-~~ 181 (349)
T 3v64_C 103 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NT 181 (349)
T ss_dssp TSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECS-SS
T ss_pred CCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccC-CC
Confidence 7665444333 33456789998744 4434 35689999986443333333333455779999988776665422 22
Q ss_pred CeEEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCC
Q 017642 239 GQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQ 316 (368)
Q Consensus 239 g~i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~ 316 (368)
+.|...+.++.....+. ..-.....|++++++..|+.+.. .+. |..+|+..... ..+... .......|++ ..+.
T Consensus 182 ~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~~~-~~~~~~-~~~~P~giav-~~~~ 257 (349)
T 3v64_C 182 PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHR-KAVISQ-GLPHPFAITV-FEDS 257 (349)
T ss_dssp CEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC-EEEECS-SCSSEEEEEE-ETTE
T ss_pred CEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCCce-EEEEeC-CCCCceEEEE-ECCE
Confidence 67777666665444432 23345789999987776665554 455 99999764333 233221 2345677888 3455
Q ss_pred EEEEEeCCCeEEEEEccCCCCC
Q 017642 317 WLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 317 ~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
++++-...+.|..++..+++..
T Consensus 258 ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 258 LYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp EEEEETTTTEEEEEETTTCCSC
T ss_pred EEEecCCCCeEEEEEccCCCcc
Confidence 5555556778888885555543
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.79 E-value=1.7e-05 Score=68.21 Aligned_cols=221 Identities=11% Similarity=0.019 Sum_probs=130.6
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecC-CCCCCCCCcEEEEeC
Q 017642 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPLNKVMIWDD 163 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~~~~~~i~vwd~ 163 (368)
.....++|+++|+++++.. .+.|..|+.+.. .. ..+. .......+++++++.++++.. .+ ...|..+|.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~--~~~~--~~~~p~gia~~~dG~l~vad~~~~----~~~v~~~d~ 102 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQ--IHAT--VEGKVSGLAFTSNGDLVATGWNAD----SIPVVSLVK 102 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EE--EEEE--CSSEEEEEEECTTSCEEEEEECTT----SCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eE--EEEe--CCCCceeEEEcCCCcEEEEeccCC----cceEEEEcC
Confidence 4578899999999766664 666888876532 22 2221 223567788887776555542 21 024777787
Q ss_pred CCCcEEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeE-EEEEec---------cCCCeeEEEEecCCCe
Q 017642 164 HQSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKL-LHQIET---------IANPKGLCAVSQGVGS 228 (368)
Q Consensus 164 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~-~~~~~~---------~~~~v~~~~~~~~~~~ 228 (368)
.+++...... .......++..+++..++ .++.|+++|...++. +..... .......+ +++++.
T Consensus 103 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ 180 (306)
T 2p4o_A 103 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNF 180 (306)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTE
T ss_pred CCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCE
Confidence 7877544333 222334555556665555 267899999866532 211111 00112334 888887
Q ss_pred EEEEeecCCCCeEEEEecCc-ce---eeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeE--eeEeccC
Q 017642 229 LVLVCPGLQKGQVRVEHYAS-KR---TKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ--EVRRGAD 302 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~-~~---~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~--~~~~~~~ 302 (368)
++++- ...+.|..++... .. ...+.. ......++++++|+++++....+. |.++|.. ++... .+.. .
T Consensus 181 lyv~d--~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~~~~~~~~~--~ 253 (306)
T 2p4o_A 181 LYVSN--TEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RSTTIIAQAEQ--G 253 (306)
T ss_dssp EEEEE--TTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCEEEEECGGG--T
T ss_pred EEEEe--CCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCEEEEeeccc--c
Confidence 66654 3467787765543 11 111111 134567899999988777766778 9999964 65532 2222 2
Q ss_pred cccEEEEEEe---cCCCEEEEEeCC
Q 017642 303 RAEIYSLAFS---SNAQWLAVSSDK 324 (368)
Q Consensus 303 ~~~v~~l~~s---p~~~~l~s~s~d 324 (368)
.....+++|. +|++.|+.++..
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred cCCceEEEEecccCCCCEEEEECCC
Confidence 2468999998 888877766543
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.79 E-value=2e-07 Score=81.04 Aligned_cols=219 Identities=15% Similarity=0.073 Sum_probs=134.2
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCC
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~ 166 (368)
.+.++...++|.+ .+++++ +..||. +++....... ........... ++.++++.. + +.|..+|.. +
T Consensus 61 ~~~~~~~~~~g~l-~v~t~~-l~~~d~-~g~~~~~~~~---~~~~~~~~~~~-~~~l~v~t~-~-----~~l~~~d~~-g 126 (330)
T 3hxj_A 61 IECRPSIGKDGTI-YFGSDK-VYAINP-DGTEKWRFDT---KKAIVSDFTIF-EDILYVTSM-D-----GHLYAINTD-G 126 (330)
T ss_dssp EEECCEETTTTEE-CCSSCE-EEEECC-CGGGGGGSCC--------CCEEEE-TTEEEEECT-T-----SEEEEECTT-S
T ss_pred cccceEEecCCcE-EEecCc-EEEECC-CCcEEEEEEC---CCCcccCceEE-CCEEEEEec-C-----CEEEEEcCC-C
Confidence 4566677667764 445544 777764 3333211111 11111112223 344444332 2 789999988 8
Q ss_pred cEEEEEe-cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEE
Q 017642 167 RCIGELS-FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRV 243 (368)
Q Consensus 167 ~~~~~~~-~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i 243 (368)
+....+. ....+.++...+++.+++ .++.|..||.. ++.+..+......+..+.+..++. +++ ++ +.+..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~--l~v--~t--~~l~~ 199 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT--IYF--GS--DKVYA 199 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC--EEE--ES--SSEEE
T ss_pred CEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE--EEE--Ee--CEEEE
Confidence 7776666 445567777887887777 46899999998 887777765555566666666665 233 33 55666
Q ss_pred EecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeC
Q 017642 244 EHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD 323 (368)
Q Consensus 244 ~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~ 323 (368)
++.+++...........+.++...++|. |..++.++. |..+| .+++.+..+.. ....+..+.+.+++. |..++.
T Consensus 200 ~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~g-l~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~g~-l~v~t~ 273 (330)
T 3hxj_A 200 INPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGH-LYAIN-PDGTEKWRFKT--GKRIESSPVIGNTDT-IYFGSY 273 (330)
T ss_dssp ECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTE-EEEEC-TTSCEEEEEEC--SSCCCSCCEECTTSC-EEEECT
T ss_pred ECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCe-EEEEC-CCCCEeEEeeC--CCCccccceEcCCCe-EEEecC
Confidence 5566666655555556688888888876 455666777 88887 46776666654 233344555655665 556777
Q ss_pred CCeEEEEEc
Q 017642 324 KGTVHVFNL 332 (368)
Q Consensus 324 dg~i~iwd~ 332 (368)
+|.|..+|.
T Consensus 274 ~ggl~~~d~ 282 (330)
T 3hxj_A 274 DGHLYAINP 282 (330)
T ss_dssp TCEEEEECT
T ss_pred CCCEEEECC
Confidence 888988885
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.78 E-value=1.7e-06 Score=81.20 Aligned_cols=232 Identities=6% Similarity=-0.054 Sum_probs=137.2
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCc--eeEE-EEEEeCCeEEEEecCC-----CCCCCCCcEEEEeCCCCc
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGG--IGVV-EMLFRCNILALVGGGP-----DPQYPLNKVMIWDDHQSR 167 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~s~~~-----d~~~~~~~i~vwd~~~~~ 167 (368)
+..|++++ ++.+..+|..+++......+. .+. ..+. ...... +.++++... + +.|..+|..+|+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~-~~~~~~~~~~~P~v~~-g~v~vg~~~~~~~~~-----g~v~a~D~~tG~ 187 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVC-DPKVGSTLTQAPFVAK-DTVLMGCSGAELGVR-----GAVNAFDLKTGE 187 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEET-TEEEEECBCGGGTCC-----CEEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCC-CCCccceeccCCEEEC-CEEEEEecCCccCCC-----CEEEEEECCCCc
Confidence 44555565 777999998888877665543 110 0110 111123 344444331 3 899999999999
Q ss_pred EEEEEecCCce---------------------------------------eEEEEeeCccEE-E-e-C------------
Q 017642 168 CIGELSFRSEV---------------------------------------RSVKLRRDRIIV-V-L-E------------ 193 (368)
Q Consensus 168 ~~~~~~~~~~v---------------------------------------~~~~~~~~~~~l-~-~-d------------ 193 (368)
.+.++...... ..+++.++...+ + . +
T Consensus 188 ~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd 267 (571)
T 2ad6_A 188 LKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGD 267 (571)
T ss_dssp EEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSC
T ss_pred EEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCC
Confidence 99887632211 124566643333 3 2 1
Q ss_pred ----CcEEEEEcCCCeEEEEEeccCC------CeeE---EEEecCCCeEEEEeecCCCCeEEEEe-cCcceeeeeeccC-
Q 017642 194 ----QKIFVYNFADLKLLHQIETIAN------PKGL---CAVSQGVGSLVLVCPGLQKGQVRVEH-YASKRTKFIMAHD- 258 (368)
Q Consensus 194 ----~~i~vwd~~~~~~~~~~~~~~~------~v~~---~~~~~~~~~~~l~~~g~~dg~i~i~~-~~~~~~~~~~~~~- 258 (368)
+.|..+|.++|+.+..++.... .+.. +....+|+...+++.++.+|.+++.+ .+++.+.......
T Consensus 268 ~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~ 347 (571)
T 2ad6_A 268 NKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPA 347 (571)
T ss_dssp CTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTT
T ss_pred ceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCC
Confidence 2599999999999888764211 1111 22234664211222256788888844 4555444332110
Q ss_pred ------------cce--------------------------EEEEECCCCCEEEEEe-----------------------
Q 017642 259 ------------SRI--------------------------ACFALTQDGQLLATSS----------------------- 277 (368)
Q Consensus 259 ------------~~i--------------------------~~v~~sp~g~~l~s~~----------------------- 277 (368)
.++ ..++++|+..+|+...
T Consensus 348 ~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~ 427 (571)
T 2ad6_A 348 VNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGA 427 (571)
T ss_dssp CCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCE
T ss_pred ccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccc
Confidence 111 2357888777666543
Q ss_pred --------------CCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 278 --------------TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 278 --------------~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
.+|. |..||+.+++.+.++... ..+....+...+..++.++.||.|+.||.++++..-
T Consensus 428 ~~~~~~~~~~~~~~~~g~-l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 428 TLAMYPGPNGPTKKEMGQ-IRAFDLTTGKAKWTKWEK---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp EEEEEECTTSTTSCCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cceeccCccccCCCCCCe-EEEEECCCCCEEEEecCC---CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 3467 999999999988877642 233333334456677778999999999999988653
No 249
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.77 E-value=2.3e-05 Score=64.09 Aligned_cols=185 Identities=9% Similarity=0.012 Sum_probs=119.3
Q ss_pred CEEEEEEcCCCCEEEEEe-C--CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 87 TLLHISFNQDHGCFAAGT-D--HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~-d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
-...+.|+. +.++.+.+ + ..|+++|+++++......+ ........+....+.++.++... +.+.+||.
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~~~~~ly~ltw~~------~~v~v~D~ 92 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVAWRDRLIQLTWRN------HEGFVYDL 92 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEEETTEEEEEESSS------SEEEEEET
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEEeCCEEEEEEeeC------CEEEEEEC
Confidence 456889986 55444444 3 3599999998887766555 33334455666777777776443 89999999
Q ss_pred CCCcEEEEEecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccC-----CCeeEEEEecCCCeEEEEeec
Q 017642 164 HQSRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIA-----NPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 164 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~g 235 (368)
.+.+.+.++.....-..++ +++..++ .++.|.++|.++.+.+..+.... ..++.+.+. +| .++... -
T Consensus 93 ~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanv-w 167 (243)
T 3mbr_X 93 ATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG-ELLANV-W 167 (243)
T ss_dssp TTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEE-T
T ss_pred CcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC-EEEEEE-C
Confidence 9999999999555445555 4554444 35689999999998888876432 123444544 44 444332 2
Q ss_pred CCCCeEEE-EecCcceeeeeec-------------cCcceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 236 LQKGQVRV-EHYASKRTKFIMA-------------HDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 236 ~~dg~i~i-~~~~~~~~~~~~~-------------~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
.+..|.+ +..+++.+..+.. ...-.+.|+++|+++.|+..+..-- ++|.+
T Consensus 168 -~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp--~~~~v 231 (243)
T 3mbr_X 168 -LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWP--MLYEI 231 (243)
T ss_dssp -TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCS--EEEEE
T ss_pred -CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCC--cEEEE
Confidence 2345544 6666666555431 1235689999998887777766543 55543
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.76 E-value=2.6e-06 Score=81.67 Aligned_cols=179 Identities=12% Similarity=0.105 Sum_probs=114.9
Q ss_pred cEEEEeCCCCcEEEEEec--C--------CceeEEEEeeCc---cEEE---eCCcEEEEEcCCCeEEEEEeccCCC----
Q 017642 157 KVMIWDDHQSRCIGELSF--R--------SEVRSVKLRRDR---IIVV---LEQKIFVYNFADLKLLHQIETIANP---- 216 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~--~--------~~v~~~~~~~~~---~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~---- 216 (368)
.|..+|..+|+.+..++. . .....+....+| ..++ .+|.|+++|.++|+.+..+......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 599999999999988872 1 122233344466 3444 5899999999999988766422100
Q ss_pred -------e------------------------eEEEEecCCCeEEEEee--------------cC---------------
Q 017642 217 -------K------------------------GLCAVSQGVGSLVLVCP--------------GL--------------- 236 (368)
Q Consensus 217 -------v------------------------~~~~~~~~~~~~~l~~~--------------g~--------------- 236 (368)
+ ..++++|+...+++... |.
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 0 14677888776555321 00
Q ss_pred -----------CCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcc
Q 017642 237 -----------QKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRA 304 (368)
Q Consensus 237 -----------~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~ 304 (368)
..|.|..|+... +.+..+. +..++....+..++.+++.++.||. +++||.++++.+..+... +..
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~-l~a~D~~tG~~lw~~~~~-~~~ 520 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGR-LVAYHAATGEKLWEAPTG-TGV 520 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECS-SCC
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCc-EEEEECCCCceeeeeeCC-CCc
Confidence 125677666554 4443433 3334444456667888888999999 999999999999998864 222
Q ss_pred cEEEEEEecCCCEEEEE-eC----------------CCeEEEEEccCCCCC
Q 017642 305 EIYSLAFSSNAQWLAVS-SD----------------KGTVHVFNLKVNSGS 338 (368)
Q Consensus 305 ~v~~l~~sp~~~~l~s~-s~----------------dg~i~iwd~~~~~~~ 338 (368)
...-+.|..+|+.+++. +. .+.+.+|.+......
T Consensus 521 ~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~~a~~ 571 (677)
T 1kb0_A 521 VAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKARM 571 (677)
T ss_dssp CSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBCCC
T ss_pred ccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccccccc
Confidence 33446677888755433 22 368899998754333
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.75 E-value=7.4e-05 Score=64.48 Aligned_cols=227 Identities=9% Similarity=-0.076 Sum_probs=135.8
Q ss_pred EEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCC----CcEEEEEe
Q 017642 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELS 173 (368)
Q Consensus 99 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~----~~~~~~~~ 173 (368)
+|+.+..+.|+..+++..+.. ..+ ........+.|++ ++.++++.... +.|..+++.. ......+.
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~--~~~--~~~~~p~g~~~d~~~~~ly~~D~~~-----~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYT--SLI--PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCE--EEE--CSCSSEEEEEEETTTTEEEEEETTT-----TEEEEEEC--------CEEEEC
T ss_pred EEEEECCCeEEEEECCCcceE--ehh--cCCCceEEEEEEeCCCEEEEEECCC-----CcEEEEECCCCCCCcccEEEEe
Confidence 566666677999998765433 223 2334466788875 34444444443 8999999875 22222232
Q ss_pred -cCCceeEEEEeeC-ccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc
Q 017642 174 -FRSEVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS 248 (368)
Q Consensus 174 -~~~~v~~~~~~~~-~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~ 248 (368)
.-.....+++.+. +.+.+ ..+.|.++|+........+.........+++.|.+..++++-.+ ..+.|...+.++
T Consensus 74 ~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG 152 (316)
T 1ijq_A 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNG 152 (316)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTS
T ss_pred CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCC
Confidence 2245688999864 44433 36789999986543333333333456779999988776665422 236777766666
Q ss_pred ceeeeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEec-cCcccEEEEEEecCCCEEEEEeCCC
Q 017642 249 KRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 249 ~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
.....+. ..-.....|++++++..|+.+.. .+. |..+|+.. .....+... ........|++. .+.++++-...+
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~ 229 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 229 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCC
Confidence 5444432 23345789999988776666554 456 99999864 333333321 112346778885 355555656678
Q ss_pred eEEEEEccCCCCC
Q 017642 326 TVHVFNLKVNSGS 338 (368)
Q Consensus 326 ~i~iwd~~~~~~~ 338 (368)
.|..++..+++..
T Consensus 230 ~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 230 AIFSANRLTGSDV 242 (316)
T ss_dssp EEEEEETTTCCCC
T ss_pred eEEEEeCCCCcce
Confidence 8999987766543
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.75 E-value=7.5e-06 Score=67.55 Aligned_cols=178 Identities=8% Similarity=-0.011 Sum_probs=116.5
Q ss_pred CEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 87 TLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
-...+.|+. +.++.+.+ ++.|+++|+++++..... + ........+.+.++.++.++... +.+.+||..+
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l--~~~~FgeGit~~g~~Ly~ltw~~------~~v~V~D~~T 125 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R--LGNIFAEGLASDGERLYQLTWTE------GLLFTWSGMP 125 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E--CTTCCEEEEEECSSCEEEEESSS------CEEEEEETTT
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C--CCCcceeEEEEeCCEEEEEEccC------CEEEEEECCc
Confidence 346788873 44444444 667999999998877655 5 34444455677778777776543 8999999999
Q ss_pred CcEEEEEecCCceeEEEEeeCccEEE---eCCcEEEEEcCCCeEEEEEeccCC-----CeeEEEEecCCCeEEEEeecCC
Q 017642 166 SRCIGELSFRSEVRSVKLRRDRIIVV---LEQKIFVYNFADLKLLHQIETIAN-----PKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 166 ~~~~~~~~~~~~v~~~~~~~~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
.+.+.++.....-+.++ +|+..++ .++.|+++|.++.+.+..+..... .++.+.|. +| .+++.. ..
T Consensus 126 l~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanv--w~ 199 (268)
T 3nok_A 126 PQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG-VIYANI--WH 199 (268)
T ss_dssp TEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEE--TT
T ss_pred CcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEE--CC
Confidence 99999998554445555 4555554 356899999999998888754322 23445665 55 444332 33
Q ss_pred CCeEEE-EecCcceeeeeecc-------------CcceEEEEECCCCCEEEEEeCCC
Q 017642 238 KGQVRV-EHYASKRTKFIMAH-------------DSRIACFALTQDGQLLATSSTKG 280 (368)
Q Consensus 238 dg~i~i-~~~~~~~~~~~~~~-------------~~~i~~v~~sp~g~~l~s~~~dg 280 (368)
+..|.+ +..+++.+..+... ..-.+.|+++|+++.|+..+..-
T Consensus 200 s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~W 256 (268)
T 3nok_A 200 SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLW 256 (268)
T ss_dssp CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTC
T ss_pred CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCC
Confidence 556655 65666655554321 13568999999877666655543
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=1.6e-06 Score=83.02 Aligned_cols=237 Identities=9% Similarity=0.045 Sum_probs=140.6
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccCC-ceeEE-EEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGG-GIGVV-EMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~ 173 (368)
+..|++++ ++.|..+|.++++........... ...+. ..... ++.+++.......-.++.|..+|..+|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 34566666 888999999888887665542000 00000 01112 3344444321000012889999999999998876
Q ss_pred c-C-Cc------------------------------eeEEEEeeCccEEE---eCC-------------------cEEEE
Q 017642 174 F-R-SE------------------------------VRSVKLRRDRIIVV---LEQ-------------------KIFVY 199 (368)
Q Consensus 174 ~-~-~~------------------------------v~~~~~~~~~~~l~---~d~-------------------~i~vw 199 (368)
. . .. ...+++.++...+. .++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 2 1 10 11367777655444 233 49999
Q ss_pred EcCCCeEEEEEeccC---------CCeeEEEEecCCCeEEEEeecCCCCeEEEEe-cCcceeeeeeccC-----------
Q 017642 200 NFADLKLLHQIETIA---------NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEH-YASKRTKFIMAHD----------- 258 (368)
Q Consensus 200 d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~-~~~~~~~~~~~~~----------- 258 (368)
|.++|+.+..++... .+.....+..+++..-+++.++.+|.+++.+ .+++.+.......
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 999999988886421 2222233444665321222367899999854 4455442211100
Q ss_pred -cce------------------------EEEEECCCCCEEEEE------------------------------------e
Q 017642 259 -SRI------------------------ACFALTQDGQLLATS------------------------------------S 277 (368)
Q Consensus 259 -~~i------------------------~~v~~sp~g~~l~s~------------------------------------~ 277 (368)
.++ ..++++|+..+++.. .
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 000 126777776655531 1
Q ss_pred CCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 278 TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 278 ~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
.+|. |..||+.+++.+.++..+ .......+...+.+++.++.|+.|++||.++++..
T Consensus 436 ~~g~-l~A~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 436 VSGA-LLAWDPVKQKAAWKVPYP---THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccce-EEEEeCCCCcEEEEccCC---CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 2377 999999999998777652 23444455567888889999999999999998765
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.74 E-value=3.4e-05 Score=68.67 Aligned_cols=237 Identities=7% Similarity=-0.049 Sum_probs=141.0
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
.-.|.+..+ ..+|+.+..+.|+.++++..... ..+ ........+.|++ ++.++++.... +.|+.+++..
T Consensus 78 ~~~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~--~~~--~~~~~~~gl~~d~~~~~ly~~D~~~-----~~I~r~~~~g 147 (386)
T 3v65_B 78 RRSCKALGP-EPVLLFANRIDIRQVLPHRSEYT--LLL--NNLENAIALDFHHRRELVFWSDVTL-----DRILRANLNG 147 (386)
T ss_dssp SSCEEECSS-CCEEEEECBSCEEEECTTSCCCE--EEE--CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTS
T ss_pred CCeECCccc-cceeEeecCccceeeccCCCcEE--EEe--cCCCccEEEEEecCCCeEEEEeCCC-----CcEEEEecCC
Confidence 344555555 44666666667888887654332 222 2334467788874 44444444443 8899999876
Q ss_pred CcEEEEEe-cCCceeEEEEeeCc-cEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCe
Q 017642 166 SRCIGELS-FRSEVRSVKLRRDR-IIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQ 240 (368)
Q Consensus 166 ~~~~~~~~-~~~~v~~~~~~~~~-~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~ 240 (368)
......+. .......+++.+.+ .+.+ ..+.|.+.++........+.........+++.|.+..++++-.+ ..+.
T Consensus 148 ~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~-~~~~ 226 (386)
T 3v65_B 148 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG-NTPR 226 (386)
T ss_dssp CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS-SSCE
T ss_pred CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC-CCCE
Confidence 65444333 33456788888744 4333 35688888876443333333333455778999988876665422 2367
Q ss_pred EEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEE
Q 017642 241 VRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWL 318 (368)
Q Consensus 241 i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l 318 (368)
|...+.++.....+. ..-.....|+|++++..|+.+.. .+. |..+|+..... ..+... .......|++ ..+.++
T Consensus 227 I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG~~~-~~~~~~-~~~~P~giav-~~~~ly 302 (386)
T 3v65_B 227 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHR-KAVISQ-GLPHPFAITV-FEDSLY 302 (386)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTSCSC-EEEECS-SCSSEEEEEE-ETTEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCCCee-EEEEEC-CCCCceEEEE-ECCEEE
Confidence 777666665444432 23345789999987766665554 455 99999764333 233221 2335678888 345555
Q ss_pred EEEeCCCeEEEEEccCCCCC
Q 017642 319 AVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 319 ~s~s~dg~i~iwd~~~~~~~ 338 (368)
++-...+.|..++..+++..
T Consensus 303 ~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 303 WTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp EEETTTTEEEEEETTTCCSC
T ss_pred EeeCCCCeEEEEECCCCcce
Confidence 66667788888886555543
No 255
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.72 E-value=0.00013 Score=65.29 Aligned_cols=229 Identities=9% Similarity=-0.064 Sum_probs=137.7
Q ss_pred CEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCC----cEEEEE
Q 017642 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQS----RCIGEL 172 (368)
Q Consensus 98 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~----~~~~~~ 172 (368)
.+|+.+..+.|+..+++..... ..+ ........++|++ ++.++++.... +.|+.+++... .....+
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~--~~~--~~~~~~~~l~~d~~~~~lywsD~~~-----~~I~~~~~~g~~~~~~~~~~~ 154 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYT--SLI--PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVI 154 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCE--EEE--CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEEC------CCCEEEE
T ss_pred ceeEEeccceeEEEccCCccee--Eec--cccCcceEEeeeeccCceEEEecCC-----CeEEEEEcccCCCCCcceEEE
Confidence 4666677778888888755433 222 3444567788875 34444443333 78999987652 223333
Q ss_pred e-cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC
Q 017642 173 S-FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (368)
Q Consensus 173 ~-~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~ 247 (368)
. .......+++.. .+.+.+ ..+.|.+.++........+.........+++.|.+..++++-.+ ..+.|...+.+
T Consensus 155 ~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~d 233 (400)
T 3p5b_L 155 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLN 233 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETT
T ss_pred eCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCC
Confidence 3 445678899987 444444 35789999986554444444334456779999988776665422 34677776666
Q ss_pred cceeeeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCC
Q 017642 248 SKRTKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 248 ~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
+.....+. ..-.....|++++++..|+.+.. .+. |..+|+........+.....-....+|++. .+.++++-...+
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~ 311 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 311 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSC
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCC
Confidence 65544442 23356789999988777766654 455 999998644333222221112345677773 344555555677
Q ss_pred eEEEEEccCCCCC
Q 017642 326 TVHVFNLKVNSGS 338 (368)
Q Consensus 326 ~i~iwd~~~~~~~ 338 (368)
.|..+|..+++..
T Consensus 312 ~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 312 AIFSANRLTGSDV 324 (400)
T ss_dssp SEEEEESSSCCCC
T ss_pred eEEEEEcCCCCce
Confidence 8888887666554
No 256
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.70 E-value=4.7e-06 Score=80.05 Aligned_cols=190 Identities=13% Similarity=0.095 Sum_probs=111.3
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCc--------eeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCc
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGG--------IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR 167 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~ 167 (368)
+..|.+++ ++.|..+|..+++............ ..........+.++ +.. .| +.|..+|..+|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~-v~~-~d-----g~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVY-VGV-LD-----GRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEE-EEC-TT-----SEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEE-EEc-cC-----CEEEEEECCCCC
Confidence 34454455 7778888988888776654321100 00011233344433 333 33 899999999999
Q ss_pred EEEEEecC------CceeEEEEeeCccEEE-e-------CCcEEEEEcCCCeEEEEEeccC-C-----------------
Q 017642 168 CIGELSFR------SEVRSVKLRRDRIIVV-L-------EQKIFVYNFADLKLLHQIETIA-N----------------- 215 (368)
Q Consensus 168 ~~~~~~~~------~~v~~~~~~~~~~~l~-~-------d~~i~vwd~~~~~~~~~~~~~~-~----------------- 215 (368)
.+..+... ..+.+.-.-.++.+++ . ++.|+.||.++|+.+..+.... .
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 98887632 1222111112666666 2 5789999999999988775211 0
Q ss_pred -------------CeeEEEEecCCCeEEEEeecCCCC-------------------eEEEEe-cCcceeeeeec--cC--
Q 017642 216 -------------PKGLCAVSQGVGSLVLVCPGLQKG-------------------QVRVEH-YASKRTKFIMA--HD-- 258 (368)
Q Consensus 216 -------------~v~~~~~~~~~~~~~l~~~g~~dg-------------------~i~i~~-~~~~~~~~~~~--~~-- 258 (368)
....+++.++.+.+++. ..++ .|..++ .+++.+..+.. |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~---~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~w 299 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIG---VGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAW 299 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEE---CCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCS
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEe---CCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccc
Confidence 01246778877765543 2343 255544 44555555443 21
Q ss_pred -----cceEEEEECCCCC---EEEEEeCCCcEEEEEECCCCceeEee
Q 017642 259 -----SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEV 297 (368)
Q Consensus 259 -----~~i~~v~~sp~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (368)
.++.......+|+ .|+.++.+|. ++++|.++|+.+...
T Consensus 300 d~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 300 DYTATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAK 345 (689)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEE
T ss_pred cccCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEeccc
Confidence 1222222223665 7889999999 999999999987543
No 257
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.69 E-value=7e-05 Score=64.64 Aligned_cols=228 Identities=10% Similarity=-0.029 Sum_probs=135.2
Q ss_pred EEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEE-EEEe-cC
Q 017642 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCI-GELS-FR 175 (368)
Q Consensus 99 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~-~~~~-~~ 175 (368)
+|+.+..+.|+.++++.........+ ........+.|++ ++.++.+.... +.|..+++..+... ..+. .-
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~--~~~~~~~~ld~d~~~~~lyw~D~~~-----~~I~r~~~~g~~~~~~~~~~~l 78 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDVSE-----EAIKRTEFNKTESVQNVVVSGL 78 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEE--EEEEEEEEEEEEGGGTEEEEEETTT-----TEEEEEETTSSSCCCEEEEECC
T ss_pred EEEEEccCeEEEEECCCCceEEEEEe--cCCCccEEEEEEeCCCEEEEEECCC-----CcEEEEEccCCCceEEEEcCCC
Confidence 56666666799999876542222222 2334566777875 23344443333 78999998765321 1222 33
Q ss_pred CceeEEEEeeC-ccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCccee
Q 017642 176 SEVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (368)
Q Consensus 176 ~~v~~~~~~~~-~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~ 251 (368)
.....+++.+. +.+.+ ..+.|.++++........+......-..+++.|.+..++++-. ...+.|...+.++...
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~-~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDW-GEVPKIERAGMDGSSR 157 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEEC-SSSCEEEEEETTSCSC
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEec-CCCCEEEEEEcCCCCe
Confidence 46778899874 44444 3568999998643322223233345577899988777665432 2356677666666544
Q ss_pred eeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEE
Q 017642 252 KFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHV 329 (368)
Q Consensus 252 ~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~i 329 (368)
..+. ..-.....|++++++..|+.+.. .+. |..+|+.... ...+... .......+++.. +.++++-...+.|..
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG~~-~~~~~~~-~~~~P~glav~~-~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTN-RQAVVKG-SLPHPFALTLFE-DILYWTDWSTHSILA 233 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCS-CEEEECS-CCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCE-EEEEcCCCCc-eEEEecC-CCCCceEEEEeC-CEEEEEecCCCeEEE
Confidence 4332 22345689999997776666554 455 9999986433 3333321 233567777753 345555556788999
Q ss_pred EEccCCCCC
Q 017642 330 FNLKVNSGS 338 (368)
Q Consensus 330 wd~~~~~~~ 338 (368)
++..+++..
T Consensus 234 ~~~~~G~~~ 242 (318)
T 3sov_A 234 CNKYTGEGL 242 (318)
T ss_dssp EETTTCCSC
T ss_pred EECCCCCce
Confidence 998777653
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.62 E-value=6.5e-05 Score=73.54 Aligned_cols=236 Identities=11% Similarity=0.067 Sum_probs=147.3
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcc----cCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
...|.++...++|.+.+ |++++|.+|+..+.......... .-....+.++..+.++.+.++... +-|..
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~------~Gl~~ 334 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYF------GGLNY 334 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESS------SCEEE
T ss_pred CCeEEEEEEcCCCCEEE-EeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECC------CCeEE
Confidence 45799999998888655 44458999986544322111000 012356888888887766665443 67888
Q ss_pred EeCCCCcEEEEEe--------cCCceeEEEEeeCccEEE-e-CCcEEEEEcCCCeEEEEEec--------cCCCeeEEEE
Q 017642 161 WDDHQSRCIGELS--------FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQIET--------IANPKGLCAV 222 (368)
Q Consensus 161 wd~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~-~-d~~i~vwd~~~~~~~~~~~~--------~~~~v~~~~~ 222 (368)
|+..++... .+. ....|.++...++|.+.+ . ++.|..||..+++....... ....|.++..
T Consensus 335 ~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 335 YHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp ECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred eCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 886554432 222 234689999988887776 4 56899999877654333211 1345777777
Q ss_pred ecCCCeEEEEeecCCCCeEEEEecCcceeeeeec-----cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEee
Q 017642 223 SQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-----HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV 297 (368)
Q Consensus 223 ~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~-----~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (368)
..++..+++. ..++-+.+++........+.. ....|.++...++|++.+.. .+ . |.+||..+++.....
T Consensus 414 d~~g~~lWig---t~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~~-G-l~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 414 DEKKSLVYIG---THAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-LS-A-LVRFNPEQRSFTTIE 487 (795)
T ss_dssp ETTTTEEEEE---ETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-SS-C-EEEEETTTTEEEECC
T ss_pred cCCCCEEEEE---eCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-cC-c-eeEEeCCCCeEEEcc
Confidence 7676524543 344556666655444444331 34579999999888855544 44 4 899998776543221
Q ss_pred Ee----ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 298 RR----GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 298 ~~----~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
.. ......|.++...++|++.+... + .|..||..+++
T Consensus 488 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~ 528 (795)
T 4a2l_A 488 KEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLD 528 (795)
T ss_dssp BCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTE
T ss_pred ccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCe
Confidence 11 11235789999999998766544 4 48889887654
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.60 E-value=3e-05 Score=72.80 Aligned_cols=228 Identities=7% Similarity=0.006 Sum_probs=132.2
Q ss_pred EEEEe-CCeEEEEEecCCCcceEEEcccCCc--eeEE-EEEEeCCeEEEEecC-----CCCCCCCCcEEEEeCCCCcEEE
Q 017642 100 FAAGT-DHGFRIYNCDPFREIFRRDFERGGG--IGVV-EMLFRCNILALVGGG-----PDPQYPLNKVMIWDDHQSRCIG 170 (368)
Q Consensus 100 l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~s~~-----~d~~~~~~~i~vwd~~~~~~~~ 170 (368)
|++++ |+.+..+|..+++......+. ... ..+. .-... ++.+++..+ .+ +.|+.+|.++|+.+.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~-~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~-----g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENS-DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVR-----GYLTAYDVKTGEQVW 196 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECC-CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCC-----CEEEEEETTTCCEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCC-CCCccceeecCCEEE-CCEEEEEecccccCCC-----CeEEEEECCCCcEEE
Confidence 55565 777888888888877665542 110 0110 00112 344444432 23 899999999999988
Q ss_pred EEecCCce---------------------------------------eEEEEeeCccEEE---eC---------------
Q 017642 171 ELSFRSEV---------------------------------------RSVKLRRDRIIVV---LE--------------- 193 (368)
Q Consensus 171 ~~~~~~~v---------------------------------------~~~~~~~~~~~l~---~d--------------- 193 (368)
.+...... ..+++.++..++. .+
T Consensus 197 ~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y 276 (599)
T 1w6s_A 197 RAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKW 276 (599)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccc
Confidence 87632211 1245555444433 22
Q ss_pred -CcEEEEEcCCCeEEEEEeccCCCe---------eEEEEe-cCCCeEEEEeecCCCCeEEEEe-cCcceeeeeecc----
Q 017642 194 -QKIFVYNFADLKLLHQIETIANPK---------GLCAVS-QGVGSLVLVCPGLQKGQVRVEH-YASKRTKFIMAH---- 257 (368)
Q Consensus 194 -~~i~vwd~~~~~~~~~~~~~~~~v---------~~~~~~-~~~~~~~l~~~g~~dg~i~i~~-~~~~~~~~~~~~---- 257 (368)
+.|..+|.++|+.+..++...... ..+... .+|+..-+++.++.+|.+++.+ .+++.+......
T Consensus 277 ~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 356 (599)
T 1w6s_A 277 TMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVN 356 (599)
T ss_dssp SSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred cceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcc
Confidence 379999999999988876532211 112222 4564222222356789888844 455544332210
Q ss_pred ---------Ccce--------------------------EEEEECCCCCEEEEEe-------------------------
Q 017642 258 ---------DSRI--------------------------ACFALTQDGQLLATSS------------------------- 277 (368)
Q Consensus 258 ---------~~~i--------------------------~~v~~sp~g~~l~s~~------------------------- 277 (368)
..++ ..++++|+..++++..
T Consensus 357 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 436 (599)
T 1w6s_A 357 VFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATL 436 (599)
T ss_dssp SEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccc
Confidence 0111 2356677665554421
Q ss_pred --------------CCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 278 --------------TKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 278 --------------~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
.+|. |.-||+.+++.+-+.... .++..-.+.-.+.+++.++.|+.|+.||.++++..
T Consensus 437 ~~~~~p~~~~~~~~~~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 437 NMYPGPKGDRQNYEGLGQ-IKAYNAITGDYKWEKMER---FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp EEEECTTSBTTTTBCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eeccCCcCCcccCCCcCe-EEEEECCCCCEEeEecCC---CCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 3467 999999999988777642 12222122335667777999999999999998864
No 260
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.55 E-value=0.00022 Score=59.08 Aligned_cols=196 Identities=11% Similarity=0.085 Sum_probs=121.0
Q ss_pred CCceeEEEEEEeCC-eEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEE---eCCcEEEEE
Q 017642 127 GGGIGVVEMLFRCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVV---LEQKIFVYN 200 (368)
Q Consensus 127 ~~~~~~~~~~~~~~-~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~---~d~~i~vwd 200 (368)
+-...+..++++++ +.+++....+ +.|...|.. ++.++.+. .......+++.+++.+++ .++.+.+++
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~-----~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKP-----AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETT-----EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCC-----CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 44456888888864 3333333334 899999987 88888886 336788999999998866 367899998
Q ss_pred cCCCe---EEEEEec------cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEec--Ccceeeeee-------ccCcceE
Q 017642 201 FADLK---LLHQIET------IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHY--ASKRTKFIM-------AHDSRIA 262 (368)
Q Consensus 201 ~~~~~---~~~~~~~------~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~--~~~~~~~~~-------~~~~~i~ 262 (368)
+.... .+..... .......+++.+.++.++++. ......|..++- ....+..+. .+...+.
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~-E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK-EKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE-ESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE-CcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 85433 2222221 223346899999998887765 221213333431 111111111 1234578
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc--C-----cccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 017642 263 CFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA--D-----RAEIYSLAFSSNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 263 ~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~--~-----~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 331 (368)
+++++|....|...+.....|.++|. +++.+..+.... + -..-..|+|.++|++.++ ++.+.+++|.
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 99999976655544544443889985 566665555421 1 125689999999985555 6777666554
No 261
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.54 E-value=0.00041 Score=67.23 Aligned_cols=229 Identities=9% Similarity=-0.069 Sum_probs=134.4
Q ss_pred CEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCC----cEEEEE
Q 017642 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQS----RCIGEL 172 (368)
Q Consensus 98 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~----~~~~~~ 172 (368)
.+|+.+....|+..+++..... ..+ ........+.++. ++.++++.... +.|+.+++... .....+
T Consensus 396 p~Ll~an~~~Ir~i~l~~~~~~--~l~--~~~~~~~gl~~d~~~~~lY~sD~~~-----~~I~~~~l~g~~~~~~~~~vi 466 (791)
T 3m0c_C 396 AYLFFTNRHEVRKMTLDRSEYT--SLI--PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVI 466 (791)
T ss_dssp CEEEEECBSSEEEECTTSCCCE--EEE--CSCSSEEEEEEETTTTEEEEEETTT-----TEEEEEEC--------CEEEE
T ss_pred cccccccccceeEeeccCCcce--eee--cCCCceEEEeecccCCeeEEeeccc-----eeEEEEeccCCCCCcceeEEE
Confidence 3566666666888777654332 222 2334556777775 34444444333 78999987653 222333
Q ss_pred e-cCCceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC
Q 017642 173 S-FRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (368)
Q Consensus 173 ~-~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~ 247 (368)
. .-.....|++...+..|. ..+.|.+.++........+.........|++.|....+|++-.| ..+.|...+.+
T Consensus 467 ~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g-~~~~I~~~~~d 545 (791)
T 3m0c_C 467 SRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLN 545 (791)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETT
T ss_pred ecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCC-CCCeEEEEecC
Confidence 3 445677899987664433 36789999986544333333344456789999988777765422 33677776666
Q ss_pred cceeeeeec-cCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCC
Q 017642 248 SKRTKFIMA-HDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 248 ~~~~~~~~~-~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
+.....+.. .-.....|++++.+..|+.+.. .+. |...++........+.....-....+|++.. +.++++-...+
T Consensus 546 G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~ 623 (791)
T 3m0c_C 546 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINE 623 (791)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTT
T ss_pred CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCC
Confidence 655554433 3356889999987776666654 445 9999985444333333211122345677643 23444444667
Q ss_pred eEEEEEccCCCCC
Q 017642 326 TVHVFNLKVNSGS 338 (368)
Q Consensus 326 ~i~iwd~~~~~~~ 338 (368)
.|...+..+++..
T Consensus 624 ~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 624 AIFSANRLTGSDV 636 (791)
T ss_dssp EEEEEETTTCCCC
T ss_pred EEEEEeCCCCcce
Confidence 7888887676554
No 262
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.54 E-value=0.00029 Score=59.62 Aligned_cols=228 Identities=13% Similarity=0.177 Sum_probs=146.4
Q ss_pred EEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEE-eCCeEEEEecCCCCCCCCCcEEEEeCCC-CcEE
Q 017642 92 SFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVMIWDDHQ-SRCI 169 (368)
Q Consensus 92 ~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~~~~~~i~vwd~~~-~~~~ 169 (368)
-.+|..+.+|.-....+.|+|+++........+ ...+.-|.| +++.+.+++. ..|+-|++.. ..++
T Consensus 73 IMnP~~~ViALrag~~LQiFnletK~klks~~~----~e~VvfWkWis~~~L~lVT~--------taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 73 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQPV 140 (365)
T ss_dssp EECSSSSEEEEEETTEEEEEETTTTEEEEEEEC----SSCEEEEEECSSSEEEEEES--------SEEEEEESSTTCCCE
T ss_pred eeCCCccEEEEecCCeEEEechHHhhhhcceec----CCccEEEEecCCCeEEEEcC--------CcEEEEcccCCCCCc
Confidence 457888888777777799999998776644444 346777777 4567777875 6799999874 3566
Q ss_pred EEEe-c----CCceeEEEEeeCccEEE----------eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCC--eE-EE
Q 017642 170 GELS-F----RSEVRSVKLRRDRIIVV----------LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVG--SL-VL 231 (368)
Q Consensus 170 ~~~~-~----~~~v~~~~~~~~~~~l~----------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~-~l 231 (368)
+.+. | ...|..-..+++.++++ ..|.+.+|..+.+ ..+.+++|......+.+.-+.. .+ .+
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCCCCCCceEEEE
Confidence 6665 2 45677778888888877 2578999998654 4566777655443332222211 11 12
Q ss_pred EeecCCCCeEEEEecC----cce------eeeee---ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 232 VCPGLQKGQVRVEHYA----SKR------TKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~----~~~------~~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
+.-+...+.++|-... +.. +..+. .-.+-..++..++....++.-+.-|. |++||+.++.++..-+
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEEEec
Confidence 2211222567773321 111 11111 12344567888887788888999999 9999999999998777
Q ss_pred eccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 299 RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 299 ~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
- ....|..-+-.....=++.....|.|.--.++..
T Consensus 299 I--S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 299 I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp C--CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTT
T ss_pred c--CCCceEEecccCCCCcEEEEcCCCEEEEEEECcc
Confidence 6 3456655555555444555568887776666554
No 263
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.52 E-value=0.00019 Score=61.92 Aligned_cols=174 Identities=9% Similarity=-0.023 Sum_probs=112.5
Q ss_pred CcEEEEeCCCCcEEEEEecCCceeEEEEeeCcc-EEE---eCCcEEEEEcCC---CeEEE-EEeccCCCeeEEEEecCCC
Q 017642 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRI-IVV---LEQKIFVYNFAD---LKLLH-QIETIANPKGLCAVSQGVG 227 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~---~~~~~-~~~~~~~~v~~~~~~~~~~ 227 (368)
+.|+..|+...+....+.......+++|++++. +.+ .++.|+.+++.. +.... .+.........+++.+.++
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 579999998877666666666788999998654 333 367899999875 12222 2322223456788988777
Q ss_pred eEEEEeecCCCCeEEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEeCC--CcEEEEEECCCCceeEeeEeccCcc
Q 017642 228 SLVLVCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTK--GTLVRIFNTLDGTLLQEVRRGADRA 304 (368)
Q Consensus 228 ~~~l~~~g~~dg~i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~d--g~~i~iwd~~~~~~~~~~~~~~~~~ 304 (368)
.++++- ...+.|.+.+.++.....+. ........++++|.+..|+.+... +. |...++. |.....+... .-.
T Consensus 90 ~ly~~d--~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~-I~~~~~d-G~~~~~~~~~-~~~ 164 (316)
T 1ijq_A 90 NIYWTD--SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE-NIQ 164 (316)
T ss_dssp EEEEEE--TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCCEEEEECS-SCS
T ss_pred eEEEEE--CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe-EEEEcCC-CCCeEEEEEC-CCC
Confidence 766653 34678888666665444433 233567899999866655555443 56 8888874 4444333321 234
Q ss_pred cEEEEEEecCCCEEEEEe-CCCeEEEEEccC
Q 017642 305 EIYSLAFSSNAQWLAVSS-DKGTVHVFNLKV 334 (368)
Q Consensus 305 ~v~~l~~sp~~~~l~s~s-~dg~i~iwd~~~ 334 (368)
....|++++++..|+.+. ..+.|..+|+..
T Consensus 165 ~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 165 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 678999999877766554 567899999864
No 264
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.50 E-value=0.00037 Score=59.01 Aligned_cols=219 Identities=12% Similarity=0.146 Sum_probs=142.1
Q ss_pred eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeC
Q 017642 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD 186 (368)
Q Consensus 107 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~ 186 (368)
.|.|.|+.......++.+. ....++ .+...-+++-+ + ..|.++|+++.+.++.+.....|.--.|-.+
T Consensus 50 ~VvIiDl~n~~~~~Rrpi~--AdsAIM--nP~~~ViALra-g-------~~LQiFnletK~klks~~~~e~VvfWkWis~ 117 (365)
T 2xzh_A 50 QVVIIDMNDPSNPIRRPIS--ADSAIM--NPASKVIALKA-G-------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 117 (365)
T ss_dssp EEEEEETTSTTSCEEEECC--CSEEEE--CSSSSEEEEEE-T-------TEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred EEEEEECCCCCCccccccc--cceeee--CCCccEEEEec-C-------CeEEEechHHhhhhcceecCCccEEEEecCC
Confidence 4889999887776665552 333332 22223333333 2 7899999999999999998888988888776
Q ss_pred ccEEE-eCCcEEEEEcCC-CeEEEEEeccC----CCeeEEEEecCCCeEEEEeecC----CCCeEEEEecCcceeeeeec
Q 017642 187 RIIVV-LEQKIFVYNFAD-LKLLHQIETIA----NPKGLCAVSQGVGSLVLVCPGL----QKGQVRVEHYASKRTKFIMA 256 (368)
Q Consensus 187 ~~~l~-~d~~i~vwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~g~----~dg~i~i~~~~~~~~~~~~~ 256 (368)
..+.+ .+..|+-|++.. ..+.+.+..|. ..|.....+++.+++++..-.. -.|.+.++..+.+.-+.+++
T Consensus 118 ~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 197 (365)
T 2xzh_A 118 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 197 (365)
T ss_dssp SEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECC
T ss_pred CeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeee
Confidence 66555 899999999964 34555554433 3344455667777765543221 24667778888888888999
Q ss_pred cCcceEEEEECCCC---CEEEEEeC--C-CcEEEEEECCCC---ce-----eEeeE--eccCcccEEEEEEecCCCEEEE
Q 017642 257 HDSRIACFALTQDG---QLLATSST--K-GTLVRIFNTLDG---TL-----LQEVR--RGADRAEIYSLAFSSNAQWLAV 320 (368)
Q Consensus 257 ~~~~i~~v~~sp~g---~~l~s~~~--d-g~~i~iwd~~~~---~~-----~~~~~--~~~~~~~v~~l~~sp~~~~l~s 320 (368)
|...-..+.+..+. ++++.+.. . +. ++|.++... .. ...+. ......-..++..++.-..+..
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEE-EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 97655444432211 23444433 2 45 999998432 11 11111 1111234568888988888888
Q ss_pred EeCCCeEEEEEccCCCCC
Q 017642 321 SSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 321 ~s~dg~i~iwd~~~~~~~ 338 (368)
.+.-|.|++||++++...
T Consensus 277 iTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EETTSEEEEEETTTCCEE
T ss_pred EeCCcEEEEEEcccCcEE
Confidence 899999999999998754
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.48 E-value=0.00016 Score=64.36 Aligned_cols=174 Identities=10% Similarity=-0.004 Sum_probs=112.9
Q ss_pred CcEEEEeCCCCcEEEEEecCCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
..|+.+++........+.....+..++|.+.+. +++ ..+.|+.+++........+.........+++.+.+..+++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~ 175 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 175 (386)
T ss_dssp SCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred ccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE
Confidence 579999987766655555566788999997544 444 3678999998766544444333334456889888877666
Q ss_pred EeecCCCCeEEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEeC-C-CcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSST-K-GTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-d-g~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
+- ...+.|.+.+.++.....+. ........|+++|.+..|+.... . +. |..+++.... ...+... .-.....
T Consensus 176 ~d--~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~-I~r~~~dG~~-~~~~~~~-~~~~PnG 250 (386)
T 3v65_B 176 TD--SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSG-RRIIADT-HLFWPNG 250 (386)
T ss_dssp EE--TTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCS-CEEEECS-SCSCEEE
T ss_pred Ec--CCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE-EEEEeCCCCC-cEEEEEC-CCCCeee
Confidence 53 34567777666655443332 23356789999987765555543 3 56 8888875433 3333221 2335789
Q ss_pred EEEecCCCEEEEE-eCCCeEEEEEccC
Q 017642 309 LAFSSNAQWLAVS-SDKGTVHVFNLKV 334 (368)
Q Consensus 309 l~~sp~~~~l~s~-s~dg~i~iwd~~~ 334 (368)
|+|+|++..|+.+ ...+.|..+|+..
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 9999877766655 4567899998764
No 266
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.45 E-value=0.0011 Score=62.60 Aligned_cols=229 Identities=8% Similarity=-0.062 Sum_probs=139.9
Q ss_pred CEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cC
Q 017642 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FR 175 (368)
Q Consensus 98 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~ 175 (368)
.+|+.+..+.|+..+++.........+ ..-.....+.|++ ++.++++...+ +.|+.+++........+. .-
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~--~~~~~~~~l~~d~~~~~lywtD~~~-----~~I~r~~~~g~~~~~v~~~g~ 79 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPL--TGVKEASALDFDVTDNRIYWTDISL-----KTISRAFMNGSALEHVVEFGL 79 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCC--CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSC
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEc--CCCCceEEEEEECCCCEEEEEECCC-----CeEEEEECCCCCcEEEEeCCC
Confidence 466666777899999876543322222 2334567788875 34444444444 899999977554443443 23
Q ss_pred CceeEEEEeeCccEE-E---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCccee
Q 017642 176 SEVRSVKLRRDRIIV-V---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (368)
Q Consensus 176 ~~v~~~~~~~~~~~l-~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~ 251 (368)
.....+++...+..+ + ..+.|.+.++........+......-..+++.|....++++-.| ..+.|...+.++...
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSER 158 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCce
Confidence 467889998754433 3 35789999986443222222333445779999877766654322 345666666666555
Q ss_pred eeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 017642 252 KFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 252 ~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 331 (368)
..+...-.....|+++++++.|+.+......|..+|+..... ..+.. .......|++.. +.++++-...+.|...|
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec--cCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 554444556789999998776666655433399999865443 33333 223456788765 44444544678888888
Q ss_pred ccCCCCC
Q 017642 332 LKVNSGS 338 (368)
Q Consensus 332 ~~~~~~~ 338 (368)
..+++..
T Consensus 235 k~tg~~~ 241 (628)
T 4a0p_A 235 KTSGQNR 241 (628)
T ss_dssp TTTCCSC
T ss_pred CCCCCce
Confidence 7776643
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.45 E-value=0.00033 Score=61.33 Aligned_cols=174 Identities=11% Similarity=0.011 Sum_probs=112.1
Q ss_pred CcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE----eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
+.|+..++........+.....+..++|++.+..+. ..+.|+.+++........+.........+++.+.+..+++
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~ 132 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW 132 (349)
T ss_dssp SCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEE
T ss_pred cceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEE
Confidence 568888877665555555556688999997544443 3678999998765443333333334467899988877666
Q ss_pred EeecCCCCeEEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEe-CC-CcEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSS-TK-GTLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~-~d-g~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
+- ...+.|.+.+.++.....+. ..-.....|+++|.+..|+... .. +. |..+++.... ...+... .-.....
T Consensus 133 ~d--~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~-I~r~~~dG~~-~~~~~~~-~~~~PnG 207 (349)
T 3v64_C 133 TD--SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSG-RRIIADT-HLFWPNG 207 (349)
T ss_dssp EE--TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCS-CEESCCS-SCSCEEE
T ss_pred Ec--CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCE-EEEEeCCCCC-cEEEEEC-CCCCcce
Confidence 53 34667887666665444433 3335578999998666555444 34 66 8888875433 2233211 2345789
Q ss_pred EEEecCCCEEEEE-eCCCeEEEEEccC
Q 017642 309 LAFSSNAQWLAVS-SDKGTVHVFNLKV 334 (368)
Q Consensus 309 l~~sp~~~~l~s~-s~dg~i~iwd~~~ 334 (368)
|+|++++..|+.+ ...+.|..+|+..
T Consensus 208 la~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 208 LTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 9999877766655 4567899999864
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.44 E-value=2.2e-05 Score=76.22 Aligned_cols=242 Identities=11% Similarity=0.019 Sum_probs=124.9
Q ss_pred CEEEEEEc-CCCCEEEEEeC--C----eEEEEEecCC-CcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcE
Q 017642 87 TLLHISFN-QDHGCFAAGTD--H----GFRIYNCDPF-REIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 87 ~v~~~~~s-~~g~~l~~~~d--~----~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i 158 (368)
.+...+|| |||++||.+.+ + .|+++|++++ +.. ...+. .....+.|++++..|+....+.......|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l-~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI-ADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC-CCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC-Ccccc----CceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 99999987652 1 2899998876 421 11111 11235677777533332222100001368
Q ss_pred EEEeCCCCc--EEEEEe--cCCceeEEEEeeCccEEE--e----CCcEEEEEcCCCe-EE--EEEe-ccCCCeeEEEEec
Q 017642 159 MIWDDHQSR--CIGELS--FRSEVRSVKLRRDRIIVV--L----EQKIFVYNFADLK-LL--HQIE-TIANPKGLCAVSQ 224 (368)
Q Consensus 159 ~vwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~l~--~----d~~i~vwd~~~~~-~~--~~~~-~~~~~v~~~~~~~ 224 (368)
+++++.+++ ....+. .......+.|+|||++++ . ...|+++|+.++. .. ..+. ........+.|+
T Consensus 250 ~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~- 328 (751)
T 2xe4_A 250 WRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH- 328 (751)
T ss_dssp EEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-
T ss_pred EEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-
Confidence 888988764 233333 334466789999999887 1 3478999997652 12 3332 222333333332
Q ss_pred CCCeEEEEeecC--CCCeEEEEecCc-ceeee-eeccCc--ceEEEEECCCCCEEEEEeCCCc-EEEEEEC-------CC
Q 017642 225 GVGSLVLVCPGL--QKGQVRVEHYAS-KRTKF-IMAHDS--RIACFALTQDGQLLATSSTKGT-LVRIFNT-------LD 290 (368)
Q Consensus 225 ~~~~~~l~~~g~--~dg~i~i~~~~~-~~~~~-~~~~~~--~i~~v~~sp~g~~l~s~~~dg~-~i~iwd~-------~~ 290 (368)
+++.+++.+... ....|...+... ..... +..+.. .+..+.+. .+.++++...++. .|.++|+ ..
T Consensus 329 ~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~ 407 (751)
T 2xe4_A 329 GTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKA 407 (751)
T ss_dssp TTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCT
T ss_pred eCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccC
Confidence 367666654211 123444444442 22233 333333 45566664 2345566666664 1556665 34
Q ss_pred CceeEeeEeccCcccEEEEEE----ecCCC-EEEEEeCC---CeEEEEEccCCC
Q 017642 291 GTLLQEVRRGADRAEIYSLAF----SSNAQ-WLAVSSDK---GTVHVFNLKVNS 336 (368)
Q Consensus 291 ~~~~~~~~~~~~~~~v~~l~~----sp~~~-~l~s~s~d---g~i~iwd~~~~~ 336 (368)
++.+..+... ....+..+.+ ++++. ++++.+.. ..++.+|+.+++
T Consensus 408 g~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 408 GTGLREVVME-EPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTCCEECCCC-CSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred CccceEECCC-CceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4313333321 1122334433 34554 44444332 457777776554
No 269
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.00028 Score=68.92 Aligned_cols=236 Identities=11% Similarity=0.047 Sum_probs=140.7
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcc----cCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEE
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE----RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMI 160 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~v 160 (368)
...|.++...++|.+.+. +++++.+||..+.+......-. ......+.++..+.++.+.++... +-|.+
T Consensus 210 ~~~i~~i~~d~~g~lwig-t~~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~------~Gl~~ 282 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWIG-TSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATEL------NGIMI 282 (781)
T ss_dssp CSSEEEEEECTTCCEEEE-ETTEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESS------SCEEE
T ss_pred CCceeEEEEcCCCCEEEE-eCCcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCC------CCeEE
Confidence 357899998888886654 4448999986543322111000 012345788888777766665543 56888
Q ss_pred EeCCCCcEEEEEe---------------cCCceeEEEEeeCccEEE-e-CCcEEEEEcCCCeEEEEEe---------ccC
Q 017642 161 WDDHQSRCIGELS---------------FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQIE---------TIA 214 (368)
Q Consensus 161 wd~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~l~-~-d~~i~vwd~~~~~~~~~~~---------~~~ 214 (368)
+|..+++...... ....|.++...++|.+.+ . ++.|..++..++....... ...
T Consensus 283 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 283 LDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSN 362 (781)
T ss_dssp EETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSS
T ss_pred ECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCC
Confidence 9977664322111 235688999988887766 4 7889999986554322110 022
Q ss_pred CCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeee----ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC
Q 017642 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM----AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 215 ~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~----~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
..|.++....++. +++ |+.++-|..++........+. .....|.++...++|.+.+ |+.++. |..+|..+
T Consensus 363 ~~v~~i~~d~~g~-lWi---gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~G-l~~~~~~~ 436 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWI---GTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGN-ISYYNTRL 436 (781)
T ss_dssp SCEEEEEECTTSC-EEE---EEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEE-EEEECSSS
T ss_pred cceEEEEEcCCCC-EEE---EeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCC-EEEEcCCC
Confidence 4567776666654 343 333444655555443333221 2345689999888887544 666666 99999877
Q ss_pred CceeEeeEe-ccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 291 GTLLQEVRR-GADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 291 ~~~~~~~~~-~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
++.. .+.. ......|.++...++|.+.+ |+. +.|.+||..+++
T Consensus 437 ~~~~-~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 437 KKFQ-IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKK 480 (781)
T ss_dssp CEEE-ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSS
T ss_pred CcEE-EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCe
Confidence 6543 3321 11235789998888887555 444 458889887654
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.00022 Score=69.65 Aligned_cols=237 Identities=11% Similarity=0.040 Sum_probs=140.1
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEE--------c---ccCCceeEEEEEEeCCeEEEEecCCCCCC
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRD--------F---ERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 153 (368)
...|.++....+|.+.+....++|.+++........... . ..-....+.++..+.++.+.++...
T Consensus 257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~---- 332 (781)
T 3v9f_A 257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWG---- 332 (781)
T ss_dssp CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBS----
T ss_pred CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecC----
Confidence 457999998888875553334789999876543221111 0 0012345788888877665555422
Q ss_pred CCCcEEEEeCCCCcEEEEE-------e---cCCceeEEEEeeCccEEE-e-CCcEEEEEcCCCeEEEEE---eccCCCee
Q 017642 154 PLNKVMIWDDHQSRCIGEL-------S---FRSEVRSVKLRRDRIIVV-L-EQKIFVYNFADLKLLHQI---ETIANPKG 218 (368)
Q Consensus 154 ~~~~i~vwd~~~~~~~~~~-------~---~~~~v~~~~~~~~~~~l~-~-d~~i~vwd~~~~~~~~~~---~~~~~~v~ 218 (368)
+-|..++..++...... . ....|.++...+++.+.+ . ++.|.+||..+++..... ......|.
T Consensus 333 --~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~ 410 (781)
T 3v9f_A 333 --GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL 410 (781)
T ss_dssp --SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE
T ss_pred --CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE
Confidence 67888987665432221 0 235689999888887766 4 678999998655432211 11234566
Q ss_pred EEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeee---ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeE
Q 017642 219 LCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQ 295 (368)
Q Consensus 219 ~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~ 295 (368)
++....++. +++ |..++-+..++........+. .....|.++...++|++.+ |+. +. |.+||..+++...
T Consensus 411 ~i~~d~~g~-lWi---gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~G-l~~~~~~~~~~~~ 483 (781)
T 3v9f_A 411 CSLKDSEGN-LWF---GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AG-VFVIDLASKKVIH 483 (781)
T ss_dssp EEEECTTSC-EEE---EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-EET-TE-EEEEESSSSSCCE
T ss_pred EEEECCCCC-EEE---EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-EEC-Cc-eEEEeCCCCeEEe
Confidence 666665554 343 334455655555444444332 1345799999988887444 455 45 8999987766443
Q ss_pred eeEec---cCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 296 EVRRG---ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 296 ~~~~~---~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
..... .....|.++...++|.+.+....+| |..||.+++
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQ 525 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCC
T ss_pred cccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCC
Confidence 22110 0135789999999888765443345 777876543
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.40 E-value=0.001 Score=59.34 Aligned_cols=205 Identities=8% Similarity=-0.031 Sum_probs=123.9
Q ss_pred CCCCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCC--cceEEEcccCCceeEEEEEEeC--CeEEEEecCCCCCCCCCc
Q 017642 84 PPPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFR--EIFRRDFERGGGIGVVEMLFRC--NILALVGGGPDPQYPLNK 157 (368)
Q Consensus 84 h~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~d~~~~~~~ 157 (368)
....+..|+|++.+..|...+ .+.|+.++++... ......+. ........++++. +.++++-... +.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavD~~~~~lY~~d~~~------~~ 182 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVL------GT 182 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-SSCSCEEEEEEETTTTEEEEEETTT------TE
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-CCCCCcccEEEEecCCceEEEECCC------Ce
Confidence 345788999998777776665 5568888876422 11112221 2233344555553 4444444433 78
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEE-Ee----CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEE
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIV-VL----EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l-~~----d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 231 (368)
|.+.++........+. .-.....+++.|.+..+ +. .+.|...++........+......-..++++++++.+++
T Consensus 183 I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp EEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEE
Confidence 9999977655444444 44568899999855444 43 367999998543332233333345577999999888777
Q ss_pred EeecCCCCeEEEEecCcceeeeeec---cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~~---~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
+- ...+.|...+.++.....+.. .-.....|++. .+.++++-...+. |..+|..+|+.+..+..
T Consensus 263 aD--~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 263 VD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EE--TTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCCEEEEC
T ss_pred EE--CCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCceEEEec
Confidence 63 346778877676655444432 22345677773 3445555556677 99999888877766664
No 272
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.39 E-value=0.00091 Score=58.90 Aligned_cols=219 Identities=12% Similarity=0.148 Sum_probs=144.3
Q ss_pred eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeC
Q 017642 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD 186 (368)
Q Consensus 107 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~ 186 (368)
.|.|.|+.......++.+. ....+ |.+...-+++-+ + ..+.++|+++.+.++.+.....|.--.|-.+
T Consensus 49 ~vvIiDl~~~~~~~rrpi~--AdsAI--MnP~~~iiALra-g-------~~lQiFnle~K~klks~~~~e~VvfWkWis~ 116 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPIS--ADSAI--MNPASKVIALKA-G-------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 116 (494)
T ss_dssp EEEEEETTSTTSCEEEECC--CSEEE--ECSSSSCEEEEE-T-------TEEEEEETTTTEEEEEEECSSCCCEEEEEET
T ss_pred eEEEEECCCCCcceecccc--cceee--eCCCCcEEEEec-C-------CeEEEEchHHhhhhcceecCCCceEEEecCC
Confidence 4889999887776655552 22222 223333334433 2 7899999999999999998888888888776
Q ss_pred ccEEE-eCCcEEEEEcCC-CeEEEEEeccC----CCeeEEEEecCCCeEEEEeecC----CCCeEEEEecCcceeeeeec
Q 017642 187 RIIVV-LEQKIFVYNFAD-LKLLHQIETIA----NPKGLCAVSQGVGSLVLVCPGL----QKGQVRVEHYASKRTKFIMA 256 (368)
Q Consensus 187 ~~~l~-~d~~i~vwd~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~~~g~----~dg~i~i~~~~~~~~~~~~~ 256 (368)
..+.+ .+..|+-|++.. ..+.+.+..|. ..|.....+++.+++++..-.. -.|.+.++..+.+.-+.+++
T Consensus 117 ~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 196 (494)
T 1bpo_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (494)
T ss_dssp TEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECC
T ss_pred CeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhee
Confidence 66555 899999999964 34555555432 3444556677777766543222 24667778888888888999
Q ss_pred cCcceEEEEECCCC---CEEEEEeCC---CcEEEEEECCCC---c-----eeEeeE--eccCcccEEEEEEecCCCEEEE
Q 017642 257 HDSRIACFALTQDG---QLLATSSTK---GTLVRIFNTLDG---T-----LLQEVR--RGADRAEIYSLAFSSNAQWLAV 320 (368)
Q Consensus 257 ~~~~i~~v~~sp~g---~~l~s~~~d---g~~i~iwd~~~~---~-----~~~~~~--~~~~~~~v~~l~~sp~~~~l~s 320 (368)
|...-..+.+..+. ++++.+... +. ++|.++... . ....+. ...-..-..++..++.-..+..
T Consensus 197 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv 275 (494)
T 1bpo_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (494)
T ss_dssp SEEEEEEEECTTCSSEEEEEEEEECSTTCCE-EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE
Confidence 97766555543222 244444442 56 999998542 1 111111 1111234568889998888888
Q ss_pred EeCCCeEEEEEccCCCCC
Q 017642 321 SSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 321 ~s~dg~i~iwd~~~~~~~ 338 (368)
.+.-|.|++||++++...
T Consensus 276 iTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp EETTSEEEEEETTTCCEE
T ss_pred EecCceEEEEecccceee
Confidence 899999999999998754
No 273
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.38 E-value=0.00099 Score=58.69 Aligned_cols=230 Identities=13% Similarity=0.167 Sum_probs=148.9
Q ss_pred EEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEE-eCCeEEEEecCCCCCCCCCcEEEEeCCC-CcE
Q 017642 91 ISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVMIWDDHQ-SRC 168 (368)
Q Consensus 91 ~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~~~~~~i~vwd~~~-~~~ 168 (368)
.-.+|..+.+|.-....+.|+|+++........+ ...+.-|.| +++.+.+++. ..|+-|++.. ..+
T Consensus 71 AIMnP~~~iiALrag~~lQiFnle~K~klks~~~----~e~VvfWkWis~~~l~lVT~--------taVyHWsi~~~s~P 138 (494)
T 1bpo_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQP 138 (494)
T ss_dssp EEECSSSSCEEEEETTEEEEEETTTTEEEEEEEC----SSCCCEEEEEETTEEEEECS--------SEEEEEESSSSCCC
T ss_pred eeeCCCCcEEEEecCCeEEEEchHHhhhhcceec----CCCceEEEecCCCeEEEEcC--------CeeEEecccCCCCc
Confidence 3467888888777777799999998776655444 234555666 5677888875 6799999864 356
Q ss_pred EEEEe-c----CCceeEEEEeeCccEEE----------eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 169 IGELS-F----RSEVRSVKLRRDRIIVV----------LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 169 ~~~~~-~----~~~v~~~~~~~~~~~l~----------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
++.+. | ...|..-..+++.++++ ..|.+.+|..+.+ ..+.+++|......+.+.-+.....+.|
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFC 217 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEE
Confidence 66665 2 45677778888998887 2578999998654 4566777765544333332222111221
Q ss_pred ec---CCCCeEEEEecCcc----------eeeeee---ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEee
Q 017642 234 PG---LQKGQVRVEHYASK----------RTKFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV 297 (368)
Q Consensus 234 ~g---~~dg~i~i~~~~~~----------~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (368)
-+ ...+.++|-..... .+..+. .-.+-..++..++....++.-+.-|. |++||+.++.++..-
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~-i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMN 296 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce-EEEEecccceeeeee
Confidence 12 12367777333211 111111 12344567888888888889999999 999999999999877
Q ss_pred EeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 298 RRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 298 ~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
+- ....|..-+-.....=++.....|.|.--.++...
T Consensus 297 rI--s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 297 RI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EC--CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred cc--cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 75 44566665555555555566688877766665543
No 274
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.38 E-value=5.5e-06 Score=72.86 Aligned_cols=163 Identities=6% Similarity=-0.056 Sum_probs=107.3
Q ss_pred cEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE-e------------CCcEEEEEcCCCeEEEEEeccC-------CC
Q 017642 157 KVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV-L------------EQKIFVYNFADLKLLHQIETIA-------NP 216 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~------------d~~i~vwd~~~~~~~~~~~~~~-------~~ 216 (368)
.|.++|..+++.+.++.....- .+.++||++.+. . ++.|.+||+.+++.+.++..+. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~ 125 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPR 125 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCC
T ss_pred eEEEEECCCCeEEEEEeCCCCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCC
Confidence 7889999999999999833333 899999998777 2 4689999999999999986441 22
Q ss_pred eeEEEEecCCCeEEEEeecCCCCeEEE--EecCcceeeeeeccCcceEEEEECCCCC-EEEEEeCCCcEEEEEECCC---
Q 017642 217 KGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYASKRTKFIMAHDSRIACFALTQDGQ-LLATSSTKGTLVRIFNTLD--- 290 (368)
Q Consensus 217 v~~~~~~~~~~~~~l~~~g~~dg~i~i--~~~~~~~~~~~~~~~~~i~~v~~sp~g~-~l~s~~~dg~~i~iwd~~~--- 290 (368)
-..++++|||+.++++. ...+..+.+ ++... +..+..-. . +.+.|+|+ .+++.+.||. +.+.|+.+
T Consensus 126 P~~ia~SpDGk~lyVan-~~~~~~v~V~~iD~~t--v~~i~v~~-~---~~~~p~g~~~~~~~~~dg~-~~~vd~~~~~~ 197 (368)
T 1mda_H 126 VHIIGNCASSACLLFFL-FGSSAAAGLSVPGASD--DQLTKSAS-C---FHIHPGAAATHYLGSCPAS-LAASDLAAAPA 197 (368)
T ss_dssp TTSEEECTTSSCEEEEE-CSSSCEEEEEETTTEE--EEEEECSS-C---CCCEEEETTEEECCCCTTS-CEEEECCSSCC
T ss_pred cceEEEcCCCCEEEEEc-cCCCCeEEEEEEchhh--ceEEECCC-c---eEEccCCCeEEEEEcCCCC-EEEEECccccc
Confidence 35689999999877654 222456777 55443 33332211 1 12334543 4556677888 88888876
Q ss_pred --CceeE----eeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 291 --GTLLQ----EVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 291 --~~~~~----~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
++... .+.. ...+. . ++++..++..+. +.|.+.|+...
T Consensus 198 ~~~~v~~~~t~~i~v--g~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~ 241 (368)
T 1mda_H 198 AAGIVGAQCTGAQNC--SSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAA 241 (368)
T ss_dssp CCEECCCCSCTTSCB--CSCCE---E-ETTTTEEEECBS-SCCEEEECCSS
T ss_pred cCCeEEEEeeeeeeC--CCCcc---c-cccCCEEEEEcC-CEEEEEECCCC
Confidence 43321 1222 12233 3 666776666666 89999998653
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.37 E-value=0.00031 Score=63.36 Aligned_cols=237 Identities=9% Similarity=-0.010 Sum_probs=135.3
Q ss_pred CEEEEEEcCC--CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 87 TLLHISFNQD--HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 87 ~v~~~~~s~~--g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
....|+|.|+ +..|..+. .+.|+.++...+... ... ........+++++++.++++...... ....+..++.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~--~~~--~~~~~P~giavd~dG~lyVad~~~~~-~~~gv~~~~~ 214 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD--IKT--TNIGQCADVNFTLNGDMVVVDDQSSD-TNTGIYLFTR 214 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE--EEC--CCCSCEEEEEECTTCCEEEEECCSCT-TSEEEEEECG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE--Eee--cCCCCccEEEECCCCCEEEEcCCCCc-ccceEEEEEC
Confidence 4568899985 44455555 566888887544332 222 33344667888877765555431100 0012333332
Q ss_pred CCCcE-EEEEecCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEE-eccC-CCeeEEEEecCCCeEEEEeecC
Q 017642 164 HQSRC-IGELSFRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQI-ETIA-NPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 164 ~~~~~-~~~~~~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~-~~~~-~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
..+.. ...+..-.....+++++ ++.+.+ .++.|+.+|..++.....+ .... ..-..++++++++.++++- .
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad--~ 292 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY--N 292 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE--T
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe--C
Confidence 22211 12222344567788999 777766 3578999998877653333 2111 1223599999998777654 3
Q ss_pred CCCeEEEEecCc--cee---eeeecc---------------CcceEEEEE---------CCCCCEEEEEeCCCcEEEEEE
Q 017642 237 QKGQVRVEHYAS--KRT---KFIMAH---------------DSRIACFAL---------TQDGQLLATSSTKGTLVRIFN 287 (368)
Q Consensus 237 ~dg~i~i~~~~~--~~~---~~~~~~---------------~~~i~~v~~---------sp~g~~l~s~~~dg~~i~iwd 287 (368)
..+.|+..+.+. ..+ ..+.+. -.....+++ .++|.++++-...+. |+.++
T Consensus 293 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~ 371 (433)
T 4hw6_A 293 GKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLT 371 (433)
T ss_dssp TTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEEC
T ss_pred CCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEEC
Confidence 456777644332 111 112111 123577999 777776666666667 99998
Q ss_pred CCCCceeEeeEeccC----------------cccEEEEEEe-cCCCEEEEEeCCCeEEEEEcc
Q 017642 288 TLDGTLLQEVRRGAD----------------RAEIYSLAFS-SNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 288 ~~~~~~~~~~~~~~~----------------~~~v~~l~~s-p~~~~l~s~s~dg~i~iwd~~ 333 (368)
. +|... .+.+... -.....|+++ ++|.++++=...+.|+.++++
T Consensus 372 ~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 372 P-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp T-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred C-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4 56433 3332100 1236789999 667666666677889988875
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.36 E-value=0.00071 Score=55.94 Aligned_cols=192 Identities=6% Similarity=0.030 Sum_probs=114.2
Q ss_pred CCCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEe
Q 017642 85 PPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
...+..++|+|++..|.+.. ++.|...|.. ++......+ ......-.+++.+++.++++...+ +.+.+++
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l--~g~~D~EGIa~~~~g~~~vs~E~~-----~~l~~~~ 97 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL--DFVKDLETIEYIGDNQFVISDERD-----YAIYVIS 97 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC--SSCSSEEEEEECSTTEEEEEETTT-----TEEEEEE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec--CCCCChHHeEEeCCCEEEEEECCC-----CcEEEEE
Confidence 35799999999877666555 3346666655 333322223 333445566677777776666555 7899998
Q ss_pred CCCCcE---EEEEe-------cCCceeEEEEeeCccEEE---eCC--cEEEEEc-CCCeEEEEEec-------cCCCeeE
Q 017642 163 DHQSRC---IGELS-------FRSEVRSVKLRRDRIIVV---LEQ--KIFVYNF-ADLKLLHQIET-------IANPKGL 219 (368)
Q Consensus 163 ~~~~~~---~~~~~-------~~~~v~~~~~~~~~~~l~---~d~--~i~vwd~-~~~~~~~~~~~-------~~~~v~~ 219 (368)
+..... +.... .......++|++++..+. ... .|+.|+- .....+..+.. .......
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 765432 22222 234568999999874443 223 4555541 11111222211 2234678
Q ss_pred EEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccC---------cceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHD---------SRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~---------~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
+++.|....+++++ .....+.+.+..++.+..+.-.. .....|+|.++|++++ .++... +++|.-
T Consensus 178 l~~dp~tg~lliLS--~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~-~y~f~~ 251 (255)
T 3qqz_A 178 AEFNQQKNTLLVLS--HESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNR-FYRFTP 251 (255)
T ss_dssp EEEETTTTEEEEEE--TTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTE-EEEEEC
T ss_pred EEEcCCCCeEEEEE--CCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCce-EEEEEe
Confidence 99999988877664 35566666777777555443221 2568999999998444 466665 777753
No 277
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.35 E-value=9.8e-05 Score=63.84 Aligned_cols=200 Identities=11% Similarity=0.005 Sum_probs=112.6
Q ss_pred CEEEEEEcC-CCCEEEEEeCCeEEEEEecCCCcceEE-EcccCCceeEEEEEEeC-CeEEEEecCCCC------------
Q 017642 87 TLLHISFNQ-DHGCFAAGTDHGFRIYNCDPFREIFRR-DFERGGGIGVVEMLFRC-NILALVGGGPDP------------ 151 (368)
Q Consensus 87 ~v~~~~~s~-~g~~l~~~~d~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~------------ 151 (368)
.+..+++.+ +|+++++...+++.+++.+........ ............+..++ ++.++++.....
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 578899997 666555544667888875533221111 11000112356678888 766555432100
Q ss_pred CCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE----eCCcEEEEEcCCCe--EEEEEeccCCCeeEEEEecC
Q 017642 152 QYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV----LEQKIFVYNFADLK--LLHQIETIANPKGLCAVSQG 225 (368)
Q Consensus 152 ~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~----~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~ 225 (368)
.-..+.|..||..+++.......-.....+++++++..+. .++.|.+|++.... ....+....+ ...+++.++
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred cCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 0012678899987776543333334567899999987443 35789999986421 1122211223 556888888
Q ss_pred CCeEEEEeec--------CCCCeEEEEecCcceeeeeeccC----cceEEEEECCCCCEEEEEeCCCcEEEEEECCC
Q 017642 226 VGSLVLVCPG--------LQKGQVRVEHYASKRTKFIMAHD----SRIACFALTQDGQLLATSSTKGTLVRIFNTLD 290 (368)
Q Consensus 226 ~~~~~l~~~g--------~~dg~i~i~~~~~~~~~~~~~~~----~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~ 290 (368)
|+ ++++..+ ...+.|..++..++.+..+.... ..++++++ .+++++++...++. |.++++..
T Consensus 240 G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~-i~~~~~~~ 313 (322)
T 2fp8_A 240 GH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGS-VGILVYDK 313 (322)
T ss_dssp SC-EEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSE-EEEEEC--
T ss_pred CC-EEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCc-eEEEeccc
Confidence 86 5555422 11345666666676666555332 34666666 35665555556666 88888753
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.34 E-value=0.00063 Score=61.34 Aligned_cols=236 Identities=9% Similarity=0.099 Sum_probs=131.8
Q ss_pred CEEEEEEcC-CCCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeE-EEEecCCCCCCCCCcEEEEeC
Q 017642 87 TLLHISFNQ-DHGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNIL-ALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 87 ~v~~~~~s~-~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~d~~~~~~~i~vwd~ 163 (368)
....|+|+| ++..|.++. .+.|+.+|++..... ... ........+++++++. ++++...... ....+.+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~--~~~--~~~~~P~~ia~d~~G~~lyvad~~~~~-~~~~v~~~~- 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS--TVY--SGLSKVRTICWTHEADSMIITNDQNNN-DRPNNYILT- 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE--EEE--CCCSCEEEEEECTTSSEEEEEECCSCT-TSEEEEEEE-
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE--EEe--cCCCCcceEEEeCCCCEEEEEeCCCCc-ccceEEEEe-
Confidence 457789998 455566565 455888887654322 222 2334566788887765 4444332100 001233344
Q ss_pred CCCcEE--EEEecCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEecc-CCCeeEEEEecCCCeEEEEeecC
Q 017642 164 HQSRCI--GELSFRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 164 ~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
..+... ..+........++++| ++.+++ .++.|+.++...+......... ...-..++|+++++.++++- .
T Consensus 212 ~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d--~ 289 (430)
T 3tc9_A 212 RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV--V 289 (430)
T ss_dssp GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE--T
T ss_pred CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE--C
Confidence 333221 3333344567888999 677666 3678999999876543332221 12345799999999766654 3
Q ss_pred CCCeEEEEecCcc--e---eeeeecc---------------CcceE-EEEEC--------CCCCEEEEEeCCCcEEEEEE
Q 017642 237 QKGQVRVEHYASK--R---TKFIMAH---------------DSRIA-CFALT--------QDGQLLATSSTKGTLVRIFN 287 (368)
Q Consensus 237 ~dg~i~i~~~~~~--~---~~~~~~~---------------~~~i~-~v~~s--------p~g~~l~s~~~dg~~i~iwd 287 (368)
..+.|..++.++. . ...+.+. -.... .++.. ++|.++++-...+. |+.++
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~ 368 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT 368 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC
Confidence 4667777544421 1 1111111 01123 45553 34655555555566 99988
Q ss_pred CCCCceeEeeEec----c----C--------cccEEEEEEecC-CCEEEEEeCCCeEEEEEcc
Q 017642 288 TLDGTLLQEVRRG----A----D--------RAEIYSLAFSSN-AQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 288 ~~~~~~~~~~~~~----~----~--------~~~v~~l~~sp~-~~~l~s~s~dg~i~iwd~~ 333 (368)
.+|+.. .+.+. . . -.....|+++++ +.++++-.....|+.++++
T Consensus 369 -~~G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 369 -PQGRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -TTSEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -CCCcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 456443 33321 0 0 114789999995 5555555567789988864
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.33 E-value=0.0011 Score=57.02 Aligned_cols=200 Identities=10% Similarity=-0.001 Sum_probs=117.9
Q ss_pred CEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEe--CCeEEEEecCCCCCCCCCcEEEEe
Q 017642 87 TLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
.+..++|.+.+..|.... .+.|..++.+....... .+. ..-.....++++ ...++++-... +.|.+++
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~-~~~-~~l~~p~glavd~~~g~ly~~d~~~------~~I~~~~ 107 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN-VVV-SGLLSPDGLACDWLGEKLYWTDSET------NRIEVSN 107 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCE-EEE-ECCSCCCEEEEETTTTEEEEEETTT------TEEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEE-EEc-CCCCCccEEEEEcCCCeEEEEECCC------CEEEEEE
Confidence 567899998766666555 55688888765432111 111 111122344444 34444444333 7899999
Q ss_pred CCCCcEEEEEe-cCCceeEEEEeeCccEEE-e----CCcEEEEEcCCCeEEEEE-eccCCCeeEEEEecCCCeEEEEeec
Q 017642 163 DHQSRCIGELS-FRSEVRSVKLRRDRIIVV-L----EQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 163 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~----d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
+........+. .-.....+++.|.+..+. . .+.|...++. |.....+ ...-..-..++++++++.++++-
T Consensus 108 ~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD-- 184 (318)
T 3sov_A 108 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWAD-- 184 (318)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEE--
T ss_pred CCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEE--
Confidence 76543333332 445678999998644443 2 3678888875 3333333 22233446799999888877653
Q ss_pred CCCCeEEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 236 LQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 236 ~~dg~i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
...+.|...+.++.....+. ........+++.. +.++.+-...+. |..+|..+++.+..+..
T Consensus 185 ~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~-V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHS-ILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEEEC
T ss_pred CCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCe-EEEEECCCCCceEEEeC
Confidence 35678888777665444432 2334567777753 344555555666 99999878876655553
No 280
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.32 E-value=0.00024 Score=66.66 Aligned_cols=57 Identities=12% Similarity=0.281 Sum_probs=41.5
Q ss_pred CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 279 KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 279 dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
+|. |.-||+.+++.+.+.... .++..-.....+.+++.++.||.|+.||.++++..-
T Consensus 465 ~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW 521 (582)
T 1flg_A 465 VGS-LRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELW 521 (582)
T ss_dssp SEE-EEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred cce-EEEEECCCCCEEEEecCC---CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEE
Confidence 577 999999999988777642 222222223346677789999999999999988653
No 281
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.31 E-value=0.00026 Score=66.29 Aligned_cols=194 Identities=9% Similarity=0.110 Sum_probs=108.7
Q ss_pred CCCEEEEEe-CCeEEEEEe-cCCCcceEEEcccCCc--------eeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 96 DHGCFAAGT-DHGFRIYNC-DPFREIFRRDFERGGG--------IGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 96 ~g~~l~~~~-d~~i~iw~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
++.+++... ++.|.-+|. .+++......+..... ..........+.+++ ... | +.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v-~~~-d-----g~l~alD~~t 134 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVK-KQA-N-----GHLLALDAKT 134 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEE-ECT-T-----SEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEE-EeC-C-----CEEEEEECCC
Confidence 444444444 566878887 7777765554421100 000112333444433 332 3 8999999999
Q ss_pred CcEEEEEecCC-----ceeEEEEeeCccEEE--e------CCcEEEEEcCCCeEEEEEeccCCC----------------
Q 017642 166 SRCIGELSFRS-----EVRSVKLRRDRIIVV--L------EQKIFVYNFADLKLLHQIETIANP---------------- 216 (368)
Q Consensus 166 ~~~~~~~~~~~-----~v~~~~~~~~~~~l~--~------d~~i~vwd~~~~~~~~~~~~~~~~---------------- 216 (368)
|+.+..+.... .+.+--.-.++.+++ . ++.|+.+|.++|+.+..+......
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 214 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHY 214 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccc
Confidence 99988876322 222211112566555 2 689999999999998877542211
Q ss_pred ----------------------eeEEEEecCCCeEEEEeecC----------CC----CeEEE-EecCcceeeeeec--c
Q 017642 217 ----------------------KGLCAVSQGVGSLVLVCPGL----------QK----GQVRV-EHYASKRTKFIMA--H 257 (368)
Q Consensus 217 ----------------------v~~~~~~~~~~~~~l~~~g~----------~d----g~i~i-~~~~~~~~~~~~~--~ 257 (368)
...+++.++...+++.. +. .| +.|.. +..+++.+-.+.. |
T Consensus 215 G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~-g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~ 293 (571)
T 2ad6_A 215 GQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGS-GNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH 293 (571)
T ss_dssp CCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC-CCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred cccccccccCcccceecCCCCeeeeEEEcCCCCeEEEEC-CCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC
Confidence 01245556555544433 31 11 23444 4445555544432 2
Q ss_pred C--------cceEEEEECCCCC---EEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 258 D--------SRIACFALTQDGQ---LLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 258 ~--------~~i~~v~~sp~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
. .++. +....+|+ .++.++.+|. +.++|..+|+.+..+..
T Consensus 294 d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 294 DEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGI-LYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred cccccccCCCCEE-EecccCCcEEEEEEEeCCCcE-EEEEECCCCCEEeeecc
Confidence 1 2221 22224674 6778888999 99999999998877653
No 282
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.31 E-value=0.00031 Score=67.21 Aligned_cols=177 Identities=12% Similarity=0.161 Sum_probs=105.8
Q ss_pred cEEEEeCCCCcEEEEEecC----------CceeEEEEeeCcc---EEE---eCCcEEEEEcCCCeEEEEEeccCC-----
Q 017642 157 KVMIWDDHQSRCIGELSFR----------SEVRSVKLRRDRI---IVV---LEQKIFVYNFADLKLLHQIETIAN----- 215 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~----------~~v~~~~~~~~~~---~l~---~d~~i~vwd~~~~~~~~~~~~~~~----- 215 (368)
.|..+|..+|+.+..++.. .......+..+++ .++ .+|.++++|.++|+.+..+.....
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 5999999999999888721 2223333444664 333 589999999999998754432110
Q ss_pred -------C------------------------eeEEEEecCCCeEEEEe-------------------------------
Q 017642 216 -------P------------------------KGLCAVSQGVGSLVLVC------------------------------- 233 (368)
Q Consensus 216 -------~------------------------v~~~~~~~~~~~~~l~~------------------------------- 233 (368)
+ -..++++|+...+++-.
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 0 01256677666544321
Q ss_pred --ecCCCCeEEEEecCc-ceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEE
Q 017642 234 --PGLQKGQVRVEHYAS-KRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLA 310 (368)
Q Consensus 234 --~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~ 310 (368)
....+|.|..|+... +.+.....+ .+.....+...+.+++.++.||. |++||.++++.+..+.... ...-.-+.
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~-l~a~d~~tG~~l~~~~~~~-~~~~~p~~ 507 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQ-MHAYSADKGEALWQFEAQS-GIVAAPMT 507 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSE-EEEEETTTCCEEEEEECSS-CCCSCCEE
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCccc-chhhhhhcChhheEecCCC-CcccCceE
Confidence 011236677666544 444344332 22332333446778889999999 9999999999998887631 11112344
Q ss_pred EecCCC-EEEEEeC--------------------CCeEEEEEccCCC
Q 017642 311 FSSNAQ-WLAVSSD--------------------KGTVHVFNLKVNS 336 (368)
Q Consensus 311 ~sp~~~-~l~s~s~--------------------dg~i~iwd~~~~~ 336 (368)
+..+|+ +++.+.. .+.|.+|.+....
T Consensus 508 ~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~ 554 (668)
T 1kv9_A 508 FELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKA 554 (668)
T ss_dssp EEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCC
T ss_pred EEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCccC
Confidence 556776 4444432 3578889886533
No 283
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.30 E-value=0.00038 Score=59.92 Aligned_cols=172 Identities=14% Similarity=0.223 Sum_probs=110.5
Q ss_pred CcEEEEeCCCCcEEEEEecCCceeEEEEeeCc----c---EEE----e--CCcEEEEEc--CCCeEEEEEec-------c
Q 017642 156 NKVMIWDDHQSRCIGELSFRSEVRSVKLRRDR----I---IVV----L--EQKIFVYNF--ADLKLLHQIET-------I 213 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~----~---~l~----~--d~~i~vwd~--~~~~~~~~~~~-------~ 213 (368)
+.|.+||+ +|+.++.+.. +.++.+..-|+- + +++ . +++|.+|++ .+++ +..+.. .
T Consensus 50 ~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATA 126 (355)
T ss_dssp TEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECC
T ss_pred CCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCC
Confidence 78999998 8998888764 678888877742 1 222 3 578999977 3333 444421 1
Q ss_pred CCCeeEEEE--ecCCCeEEEEeecCCCCeEEEEecC--------cceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEE
Q 017642 214 ANPKGLCAV--SQGVGSLVLVCPGLQKGQVRVEHYA--------SKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLV 283 (368)
Q Consensus 214 ~~~v~~~~~--~~~~~~~~l~~~g~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i 283 (368)
......+|+ ++....+++.. ...+|.+..|... .+.++.+.. ...+..+...+....|+.+-++.. |
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV-~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G-I 203 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMV-TGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA-I 203 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEE-ECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE-E
T ss_pred CCCeeEEEEEecCCCCcEEEEE-ECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce-E
Confidence 134455777 56544434443 3467888775542 244455544 346788888888889999999977 7
Q ss_pred EEEECC-----CCceeEeeEeccCcccEEEEEE--ecCCC-EEEEEe-CCCeEEEEEcc
Q 017642 284 RIFNTL-----DGTLLQEVRRGADRAEIYSLAF--SSNAQ-WLAVSS-DKGTVHVFNLK 333 (368)
Q Consensus 284 ~iwd~~-----~~~~~~~~~~~~~~~~v~~l~~--sp~~~-~l~s~s-~dg~i~iwd~~ 333 (368)
..+|.+ +++.+..+....-...+..|++ .++++ +|++++ .+++..+||.+
T Consensus 204 w~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 777755 3445544432212346888888 45555 666666 67789999996
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.27 E-value=0.0011 Score=60.20 Aligned_cols=251 Identities=8% Similarity=0.018 Sum_probs=134.7
Q ss_pred CEEEEEEcC-CCCEEEEEeC--CeEEEEEecCCCcceEEEcccCCceeEEEEEE-------eCCeE-EEEecCCCCC-CC
Q 017642 87 TLLHISFNQ-DHGCFAAGTD--HGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-------RCNIL-ALVGGGPDPQ-YP 154 (368)
Q Consensus 87 ~v~~~~~s~-~g~~l~~~~d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~s~~~d~~-~~ 154 (368)
....|+|.| ++..|.++.+ +.|++.|++....................+++ ++++. ++++...+.. ..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 578899998 4555555553 34777776654433222211012234677888 76654 4444332100 00
Q ss_pred CCcEEEEeCCC-CcEE-----EEEecCCceeEEEEeeC-ccEEE---eCCcEEEEEcC-------CCeE-----------
Q 017642 155 LNKVMIWDDHQ-SRCI-----GELSFRSEVRSVKLRRD-RIIVV---LEQKIFVYNFA-------DLKL----------- 206 (368)
Q Consensus 155 ~~~i~vwd~~~-~~~~-----~~~~~~~~v~~~~~~~~-~~~l~---~d~~i~vwd~~-------~~~~----------- 206 (368)
...|.+++... ++.. ..+..-.....++++|+ +.+++ .++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 01366675333 2221 22222234567788994 55444 46789999987 5543
Q ss_pred EEE-Eec-cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc--cee---eeeecc---C------------cceE-E
Q 017642 207 LHQ-IET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS--KRT---KFIMAH---D------------SRIA-C 263 (368)
Q Consensus 207 ~~~-~~~-~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~~---~~~~~~---~------------~~i~-~ 263 (368)
... +.. ....-..++|+|+++.++++- .....|+..+.++ ..+ ..+.+. . .... .
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD--~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGV--INNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEE--TTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEe--CCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112 221 123346799999999767654 3456777644332 221 122111 0 1234 4
Q ss_pred EEEC-------CCCCEEEEEeCCCcEEEEEECCCCceeEeeEecc-------------Cc---------ccEEEEEEecC
Q 017642 264 FALT-------QDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGA-------------DR---------AEIYSLAFSSN 314 (368)
Q Consensus 264 v~~s-------p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~-------------~~---------~~v~~l~~sp~ 314 (368)
++.. .+|.++++=..+.. |+.++ .+|. +.++.+.. .. .....|++.++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~r-Ir~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFC-VRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTE-EEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEccccccccCCCeEEEEECCCCE-EEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 5554 45666665566666 99998 5664 44544310 01 23678999997
Q ss_pred -CCEEEEEeCCCeEEEEEccCCCCCCCCC
Q 017642 315 -AQWLAVSSDKGTVHVFNLKVNSGSARSE 342 (368)
Q Consensus 315 -~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 342 (368)
|.++++=.....||.++++......+..
T Consensus 455 ~g~lyVaD~~N~rIrki~~~~~~~~~~~~ 483 (496)
T 3kya_A 455 KEMFYVHDQVGHTIRTISMEQEENVAGDE 483 (496)
T ss_dssp TTEEEEEETTTTEEEEEEECCCC------
T ss_pred CCEEEEEeCCCCEEEEEECCCCcccccCC
Confidence 7666666678899999998766555443
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.24 E-value=4.7e-05 Score=72.80 Aligned_cols=238 Identities=8% Similarity=-0.026 Sum_probs=123.3
Q ss_pred EEEEcC-CCCEEEEEe-CC-----------eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecC-CCCCCCC
Q 017642 90 HISFNQ-DHGCFAAGT-DH-----------GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-PDPQYPL 155 (368)
Q Consensus 90 ~~~~s~-~g~~l~~~~-d~-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~d~~~~~ 155 (368)
++++.+ +|++++.|+ +. .+.+||..+.+......+...+.......++..++.+++.|+ .+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~----- 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----- 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-----
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-----
Confidence 456677 888888876 21 377888876654332223212222222345555555555555 43
Q ss_pred CcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEEeC---------CcEEEEEcCCCeEEEEE----eccCCCeeEE
Q 017642 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVLE---------QKIFVYNFADLKLLHQI----ETIANPKGLC 220 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~d---------~~i~vwd~~~~~~~~~~----~~~~~~v~~~ 220 (368)
..+.+||..+++....-. ....-.+++..+++++++.. ..+.+||..+.+-...- ..........
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~ 344 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQG 344 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTG
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccc
Confidence 689999988775443322 22223455666688777722 46999999876533220 0000000001
Q ss_pred EEecCCCeEEEEeecCCCCe---------EEEEecCcce-eeeeeccC---------cceEEEEEC-CCCCEEEEEeCCC
Q 017642 221 AVSQGVGSLVLVCPGLQKGQ---------VRVEHYASKR-TKFIMAHD---------SRIACFALT-QDGQLLATSSTKG 280 (368)
Q Consensus 221 ~~~~~~~~~~l~~~g~~dg~---------i~i~~~~~~~-~~~~~~~~---------~~i~~v~~s-p~g~~l~s~~~dg 280 (368)
.+..++. ++++ |..+|. +..|+..... ......+. ..-.++.|. .++++++.|+.++
T Consensus 345 ~~~~~~~-iyv~--Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~ 421 (656)
T 1k3i_A 345 LYRSDNH-AWLF--GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPD 421 (656)
T ss_dssp GGTTTCS-CCEE--ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSS
T ss_pred eeecCCc-eEEE--ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCC
Confidence 1112232 2222 223433 3444433322 11111111 122444443 3778888887543
Q ss_pred -----------cEEEEEECCCCceeEee-EeccCcccEEEEEEecCCCEEEEEeCC-----------CeEEEEEccCCC
Q 017642 281 -----------TLVRIFNTLDGTLLQEV-RRGADRAEIYSLAFSSNAQWLAVSSDK-----------GTVHVFNLKVNS 336 (368)
Q Consensus 281 -----------~~i~iwd~~~~~~~~~~-~~~~~~~~v~~l~~sp~~~~l~s~s~d-----------g~i~iwd~~~~~ 336 (368)
. |.+||..+.+..... ........-.+++..|++++++.|+.+ ..+.+||..+.+
T Consensus 422 ~~~~~~~~~~~~-v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 422 YQDSDATTNAHI-ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSSBCCCCEEE-EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCCcCCcceE-EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 5 788888776544322 011111122345667899999998854 468999998765
No 286
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=0.0005 Score=58.92 Aligned_cols=188 Identities=7% Similarity=-0.052 Sum_probs=110.2
Q ss_pred eEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEEeC---C--cEEEEEcCCCe
Q 017642 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVVLE---Q--KIFVYNFADLK 205 (368)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~d---~--~i~vwd~~~~~ 205 (368)
....+++++++.++++.... +.|..||... +....+........+++.+++++++.+ . .|..+|..+++
T Consensus 33 ~pegia~~~~g~lyv~d~~~-----~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEV-----GEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CEEEEEECTTSCEEEEETTT-----TEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CcceEEECCCCCEEEEeCCC-----CeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 44567777777666665444 8899999654 444445556678999999999877632 2 37777877877
Q ss_pred EEEEEeccC-CCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc--eeeee---------eccCcceEEEEECCCCCEE
Q 017642 206 LLHQIETIA-NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK--RTKFI---------MAHDSRIACFALTQDGQLL 273 (368)
Q Consensus 206 ~~~~~~~~~-~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~--~~~~~---------~~~~~~i~~v~~sp~g~~l 273 (368)
......... .....++..+ +..++ ++ ...++.|.+.+.... .+... ...-.....| ++++++|
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~-~~~~~-v~-d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLS-DTQYL-TA-DSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp EEEEEECTTCSCEEEEEESS-SSEEE-EE-ETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred EEEEEeCCCccccCcccccC-CCcEE-EE-ECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 543332211 1123344433 33333 33 334677777554432 11100 0111234555 7888766
Q ss_pred EEEeC-CCcEEEEEECCC-Cce--eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEcc
Q 017642 274 ATSST-KGTLVRIFNTLD-GTL--LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLK 333 (368)
Q Consensus 274 ~s~~~-dg~~i~iwd~~~-~~~--~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~ 333 (368)
+.+.. .+. |.+||+.. ++. ...+.. ......|++.++|+++++....+.|.+++..
T Consensus 182 yv~d~~~~~-I~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 182 YVSNTEKML-LLRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEEETTTTE-EEEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEEeCCCCE-EEEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 65554 556 99999864 332 112221 1235678999999887776667889999864
No 287
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.20 E-value=8.4e-05 Score=72.20 Aligned_cols=197 Identities=8% Similarity=0.023 Sum_probs=106.4
Q ss_pred eEEEEEEe-CCeEEEEecCCCCCCCCCcEEEEeCCCC-cEEEE-EecCCceeEEEEeeCccEEE---eC-----CcEEEE
Q 017642 131 GVVEMLFR-CNILALVGGGPDPQYPLNKVMIWDDHQS-RCIGE-LSFRSEVRSVKLRRDRIIVV---LE-----QKIFVY 199 (368)
Q Consensus 131 ~~~~~~~~-~~~~~~~s~~~d~~~~~~~i~vwd~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~---~d-----~~i~vw 199 (368)
.+..+.|+ |++..++-......-...+|+++|+.++ +.+.. +. .....++|+||++.++ .+ ..|+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 56778899 8876554221110000135999999998 63211 11 1245788999997776 23 368888
Q ss_pred EcCCCeE--EEEEec-cCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc--ee--eee-eccCcceEEEEECCCCC
Q 017642 200 NFADLKL--LHQIET-IANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK--RT--KFI-MAHDSRIACFALTQDGQ 271 (368)
Q Consensus 200 d~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~--~~--~~~-~~~~~~i~~v~~sp~g~ 271 (368)
++.+++. ...+.. .......+.|++||+.+++.........|.+.+.... .. ..+ .........+.|+..+.
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 9877642 223322 2233456889999998776653333455666555432 22 333 33445556666654444
Q ss_pred EEEEEeCC--C--cEEEEEECCCCceeEe-eEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEE
Q 017642 272 LLATSSTK--G--TLVRIFNTLDGTLLQE-VRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 272 ~l~s~~~d--g--~~i~iwd~~~~~~~~~-~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd 331 (368)
+++....+ + . |..+|+.++..... +..+.....+..+.+. .+.++++...++..+||-
T Consensus 333 l~~~t~~~~a~~~~-L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 333 LVILTNEGGAVNHK-LLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EEEEECTTTCTTCE-EEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCCCCCcE-EEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEE
Confidence 44444443 2 4 77777765322223 3321112245555554 234455666777654443
No 288
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.19 E-value=0.00037 Score=66.56 Aligned_cols=229 Identities=8% Similarity=-0.013 Sum_probs=115.3
Q ss_pred EEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCe-EEEEecCCCCCCCCCcEEEEeCC
Q 017642 88 LLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNI-LALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 88 v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
..++++..+|++++.|+ +..+.+||..+.+-.....+. ..+.. ......+++ +++++|..+.......+.+||..
T Consensus 245 ~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~-~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~ 322 (656)
T 1k3i_A 245 CPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQ-VARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 322 (656)
T ss_dssp SCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCS-SCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred cccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCC-ccccc-cceEEecCCeEEEEeCcccCCcccccceEeCCC
Confidence 34567788999999998 345999998765433222221 22222 233333344 44444423311122579999998
Q ss_pred CCcEEEE-------Ee---------cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEEeccCC---------Ce
Q 017642 165 QSRCIGE-------LS---------FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQIETIAN---------PK 217 (368)
Q Consensus 165 ~~~~~~~-------~~---------~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~~---------~v 217 (368)
+++.... +. ....+..+.. .++..+. ....+..||..+............ ..
T Consensus 323 t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg-~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~ 401 (656)
T 1k3i_A 323 SKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW-KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCG 401 (656)
T ss_dssp TTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC-GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTC
T ss_pred CCcceeCCCccccccccccccceeecCCceEEEEC-CCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCC
Confidence 8765432 00 0111111111 1233222 245688999877654333322211 12
Q ss_pred eEEEEecCCCeEEEEeecCCCC-----------eEEEEecCcceeeeee---ccCc-ceEEEEECCCCCEEEEEeCC---
Q 017642 218 GLCAVSQGVGSLVLVCPGLQKG-----------QVRVEHYASKRTKFIM---AHDS-RIACFALTQDGQLLATSSTK--- 279 (368)
Q Consensus 218 ~~~~~~~~~~~~~l~~~g~~dg-----------~i~i~~~~~~~~~~~~---~~~~-~i~~v~~sp~g~~l~s~~~d--- 279 (368)
.++.+...+..++ ++ |+.++ .+.+++.....-..+. .... .-.++...++|++++.|+.+
T Consensus 402 ~av~~~~~~~~i~-v~-GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 402 NAVMYDAVKGKIL-TF-GGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp EEEEEETTTTEEE-EE-CCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred ceEeccCCCCeEE-EE-eCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc
Confidence 3344444344444 44 33221 3444554433222221 1111 12345567899999998854
Q ss_pred --------CcEEEEEECCCCceeEeeEecc-CcccEEEEEEecCCCEEEEEeC
Q 017642 280 --------GTLVRIFNTLDGTLLQEVRRGA-DRAEIYSLAFSSNAQWLAVSSD 323 (368)
Q Consensus 280 --------g~~i~iwd~~~~~~~~~~~~~~-~~~~v~~l~~sp~~~~l~s~s~ 323 (368)
.. +.+||..+.+-.. +.... .........+.+||++++.|+.
T Consensus 480 ~~~~~~~~~~-v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFT-PEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTCCCSBCCC-CEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CcCCCCcccc-eEEEcCCCCceee-cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45 8999987765332 22110 1112234556799999999884
No 289
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.15 E-value=0.0011 Score=62.13 Aligned_cols=140 Identities=13% Similarity=0.156 Sum_probs=85.0
Q ss_pred CcEEEEeCCCCcEEEEEecCC-----ceeEEEEeeCccEEE-e-------CCcEEEEEcCCCeEEEEEeccCCCe-----
Q 017642 156 NKVMIWDDHQSRCIGELSFRS-----EVRSVKLRRDRIIVV-L-------EQKIFVYNFADLKLLHQIETIANPK----- 217 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~-~-------d~~i~vwd~~~~~~~~~~~~~~~~v----- 217 (368)
+.|.-+|..+|+.+....... .+.+--.-.++.+++ . ++.|+.+|.++|+.+..+.......
T Consensus 131 g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~ 210 (599)
T 1w6s_A 131 GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLA 210 (599)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBC
T ss_pred CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccc
Confidence 899999999999988776322 222211113566666 2 6899999999999988775432110
Q ss_pred ---------------------------------eEEEEecCCCeEEEEeecCC--------------CCeEEE-EecCcc
Q 017642 218 ---------------------------------GLCAVSQGVGSLVLVCPGLQ--------------KGQVRV-EHYASK 249 (368)
Q Consensus 218 ---------------------------------~~~~~~~~~~~~~l~~~g~~--------------dg~i~i-~~~~~~ 249 (368)
...++.+....+++.+ +.. .+.|.. +..+++
T Consensus 211 p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~-g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~ 289 (599)
T 1w6s_A 211 SDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT-GNPAPWNETMRPGDNKWTMTIFGRDADTGE 289 (599)
T ss_dssp TTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC-CCCSCSCGGGSCSCCTTSSEEEEEETTTCC
T ss_pred cccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC-CCCccccCcccCCCccccceEEEEeCCCCc
Confidence 1234555666544433 321 123443 444555
Q ss_pred eeeeeec--cC--------cceEEEEEC-CCC---CEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 250 RTKFIMA--HD--------SRIACFALT-QDG---QLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 250 ~~~~~~~--~~--------~~i~~v~~s-p~g---~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
.+-.+.. |. .++. +... .+| +.++.++.+|. +.++|.++|+.+....
T Consensus 290 ~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 290 AKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANK 350 (599)
T ss_dssp EEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred eeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeeccc
Confidence 5544432 21 1221 2222 467 46778899999 9999999999887665
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0076 Score=58.46 Aligned_cols=203 Identities=8% Similarity=-0.045 Sum_probs=116.1
Q ss_pred CCCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCc--ceEEEcc-cCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEE
Q 017642 85 PPTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFRE--IFRRDFE-RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVM 159 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~ 159 (368)
...+..|+|.+....|.... .+.|+.++++.... .....+. ......-+++.|..+.++++-... +.|.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~------~~I~ 496 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL------GTVS 496 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT------TEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCC------CeEE
Confidence 45678899998666665555 45588888764211 1112221 012222334444444555554443 7999
Q ss_pred EEeCCCCcEEEEEe-cCCceeEEEEeeCcc-EEEeC----CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe
Q 017642 160 IWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVVLE----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 160 vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~d----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ 233 (368)
+.++........+. .-.....|++.|.+. +++.| +.|.+.++........+......-..+++.+.+..+|++-
T Consensus 497 v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 497 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 99977554433333 445688999999744 44432 6799999864433333333334567799998888877763
Q ss_pred ecCCCCeEEEEecCcceeeeeec---cCcceEEEEECCCCCEEEEEe-CCCcEEEEEECCCCceeEeeE
Q 017642 234 PGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSS-TKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 234 ~g~~dg~i~i~~~~~~~~~~~~~---~~~~i~~v~~sp~g~~l~s~~-~dg~~i~iwd~~~~~~~~~~~ 298 (368)
...+.|...+.++.....+.. .-.....|++. +.+|+.+. ..+. |...|..+|+.+..+.
T Consensus 577 --~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~-I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 577 --SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA-IFSANRLTGSDVNLLA 640 (791)
T ss_dssp --TTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE-EEEEETTTCCCCEEEE
T ss_pred --CCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCE-EEEEeCCCCcceEEee
Confidence 345678776666655544432 12234567663 33454444 4555 8888877776555543
No 291
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=0.00072 Score=60.98 Aligned_cols=154 Identities=6% Similarity=0.011 Sum_probs=96.1
Q ss_pred ceeEEEEee--CccEEEe--CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCC-C-eEEEEecCcce
Q 017642 177 EVRSVKLRR--DRIIVVL--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK-G-QVRVEHYASKR 250 (368)
Q Consensus 177 ~v~~~~~~~--~~~~l~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~d-g-~i~i~~~~~~~ 250 (368)
....++++| ++.+.+. .+.|+.+|+..++...... .......++++++++.++++-.+... . .+.+....+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457889996 3555443 3789999998766544433 44456779999999876665422111 1 23333333322
Q ss_pred e--eeeeccCcceEEEEECC-CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE-eCCCe
Q 017642 251 T--KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS-SDKGT 326 (368)
Q Consensus 251 ~--~~~~~~~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~-s~dg~ 326 (368)
. ..+.. ......++++| +|.++++-..++. |..++...+......... .......|+|+|+|++|+.+ ...+.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~-V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQ-VFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTE-EEEEETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCE-EEEEECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCCCE
Confidence 2 22222 23457788999 6776666666777 999998766543222221 12356899999999955544 56788
Q ss_pred EEEEEccC
Q 017642 327 VHVFNLKV 334 (368)
Q Consensus 327 i~iwd~~~ 334 (368)
|+.++.+.
T Consensus 294 I~~~~~d~ 301 (430)
T 3tc9_A 294 ILRSDYDW 301 (430)
T ss_dssp EEEEEEET
T ss_pred EEEEeCCc
Confidence 99988764
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.01 E-value=2.2e-05 Score=75.37 Aligned_cols=226 Identities=10% Similarity=-0.064 Sum_probs=120.2
Q ss_pred EEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCC----CcEEEEEe
Q 017642 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQ----SRCIGELS 173 (368)
Q Consensus 99 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~----~~~~~~~~ 173 (368)
+|+....+.|++.+++..... ..+ ........++|++ .+.++++.... +.|+.+++.. ......+.
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~--~~~--~~~~~p~gla~d~~~~~Ly~sD~~~-----~~I~~~~~~g~~~~~~~~~~i~ 449 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYT--SLI--PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVIS 449 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEE--CCS--CCCTTCCCCEEETTTTEEEECCTTT-----TSBEEEESCCCCC-CCCCCBCC
T ss_pred eEEecCccceEEEeCCCCcce--eee--ccCcceEEEccccccCeEEEEecCC-----CeEEEEecCCCCCCcceEEEEe
Confidence 344444556777776653322 222 1122344566665 34444444333 7899998765 22211221
Q ss_pred -cCCceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc
Q 017642 174 -FRSEVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS 248 (368)
Q Consensus 174 -~~~~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~ 248 (368)
.-.....+++.+ .+.+++ ..+.|.++++........+.........+++.|.+..++++-. ...+.|.+.+.++
T Consensus 450 ~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~-~~~~~I~~~~~dG 528 (699)
T 1n7d_A 450 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDW-GTPAKIKKGGLNG 528 (699)
T ss_dssp SCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCC-SSSCCEEBCCSSS
T ss_pred CCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEccc-CCCCeEEEEeCCC
Confidence 123456778874 344444 3578999998654433333322334567889988776665431 1236677655555
Q ss_pred ceeeeee-ccCcceEEEEECCCCCEEEEE-eCCCcEEEEEECCCCceeEeeEec-cCcccEEEEEEecCCCEEEEEeCCC
Q 017642 249 KRTKFIM-AHDSRIACFALTQDGQLLATS-STKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 249 ~~~~~~~-~~~~~i~~v~~sp~g~~l~s~-~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
.....+. ..-...+.|+|++++..|+.+ ...+. |.++|+..... ..+... ........|++..+ .++++....+
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE-EEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe-EEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 4433332 223346789999876655544 44556 99999864332 233211 01123445666543 4444555667
Q ss_pred eEEEEEccCCCC
Q 017642 326 TVHVFNLKVNSG 337 (368)
Q Consensus 326 ~i~iwd~~~~~~ 337 (368)
.|..++..+++.
T Consensus 606 ~V~~~d~~~G~~ 617 (699)
T 1n7d_A 606 AIFSANRLTGSD 617 (699)
T ss_dssp CEEEEETTTEEE
T ss_pred eEEEEEccCCCc
Confidence 899998765543
No 293
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.00 E-value=0.0045 Score=58.05 Aligned_cols=194 Identities=9% Similarity=0.114 Sum_probs=108.5
Q ss_pred CCCEEEEEeCCeEEEEEecCCCcceEEEcccCCcee------EEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEE
Q 017642 96 DHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIG------VVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (368)
Q Consensus 96 ~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~ 169 (368)
++.+++.+.++.|.-+|..+++.............. ........+.+++.+. + +.|.-+|..+|+.+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--d-----g~l~AlD~~TG~~~ 140 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--D-----ASVVALNKNTGKVV 140 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--T-----TEEEEEESSSCCEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--C-----CEEEEEECCCCCEE
Confidence 444444444455888888877777665543111000 0112234444444432 3 89999999999998
Q ss_pred EEEecCC-----cee-EEEEeeC---c--cEEE-e-------CCcEEEEEcCCCeEEEEEeccCCCe-------------
Q 017642 170 GELSFRS-----EVR-SVKLRRD---R--IIVV-L-------EQKIFVYNFADLKLLHQIETIANPK------------- 217 (368)
Q Consensus 170 ~~~~~~~-----~v~-~~~~~~~---~--~~l~-~-------d~~i~vwd~~~~~~~~~~~~~~~~v------------- 217 (368)
..+.... .+. ...+..+ + .+++ . ++.|+.+|.++|+.+.........+
T Consensus 141 W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~ 220 (582)
T 1flg_A 141 WKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGD 220 (582)
T ss_dssp EEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSC
T ss_pred eeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccc
Confidence 8876221 121 1122222 2 3444 2 6899999999999887654321000
Q ss_pred ----------------------------eEEEEecCCCeEEEEeecC-----------C-------C----CeEEEEe-c
Q 017642 218 ----------------------------GLCAVSQGVGSLVLVCPGL-----------Q-------K----GQVRVEH-Y 246 (368)
Q Consensus 218 ----------------------------~~~~~~~~~~~~~l~~~g~-----------~-------d----g~i~i~~-~ 246 (368)
...++.+....+++.+ +. . | +.|..++ .
T Consensus 221 ~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~-gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~ 299 (582)
T 1flg_A 221 VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGA-GNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPS 299 (582)
T ss_dssp TTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEE-CCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTT
T ss_pred cccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeC-CCCCcccCcccccCCCcccccCCcccceEEEEeCC
Confidence 1245555666555543 31 1 2 4555544 4
Q ss_pred Ccceeeeeec--cC--------cceEEEEEC-CCCC---EEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 247 ASKRTKFIMA--HD--------SRIACFALT-QDGQ---LLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 247 ~~~~~~~~~~--~~--------~~i~~v~~s-p~g~---~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
+++.+-.++. |. .++. +... .+|+ +++.++.+|. ++++|..+|+.+..+..
T Consensus 300 TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 300 SGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp TCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred CCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCce-EEEEECCCCCEeccccc
Confidence 5555554432 32 1221 2221 4674 7888999999 99999999998876654
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.99 E-value=0.004 Score=58.81 Aligned_cols=229 Identities=10% Similarity=-0.028 Sum_probs=125.2
Q ss_pred CEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcE-EEEEe-c
Q 017642 98 GCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRC-IGELS-F 174 (368)
Q Consensus 98 ~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~-~~~~~-~ 174 (368)
.+|+-+..+.|++.+++.......... ..-.....+.+++ ++.++++.... +.|..+++..... ...+. .
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~--~~~~~~~~ld~~~~~~~ly~sD~~~-----~~I~r~~~~g~~~~~~v~~~~ 82 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVV--GGLEDAAAVDFVFSHGLIYWSDVSE-----EAIKRTEFNKTESVQNVVVSG 82 (619)
T ss_dssp CCEEEECSSBEEEECCC---------C--BCCSCEEEEEEETTTTEEEEEETTT-----TEEEEEEC-----CEEEECSS
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEE--cCCCceEEEEEEeCCCEEEEEECCC-----CeEEEEEccCCCceEEEEeCC
Confidence 355666677788888875432211222 2333456777775 34444443333 7899998765432 22233 2
Q ss_pred CCceeEEEEeeCcc-EEE---eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcce
Q 017642 175 RSEVRSVKLRRDRI-IVV---LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKR 250 (368)
Q Consensus 175 ~~~v~~~~~~~~~~-~l~---~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~ 250 (368)
-.....+++...+. +.+ ..+.|.+.++........+......-..+++.|.+..++++-.| ..+.|.....++..
T Consensus 83 ~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g-~~~~I~r~~~dG~~ 161 (619)
T 3s94_A 83 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSS 161 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS-SSCEEEEEETTSCS
T ss_pred CCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC-CCCEEEEEECCCCc
Confidence 35788999998544 433 35789999986443222232333445678999987776654322 34566665555554
Q ss_pred eeeee-ccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEE
Q 017642 251 TKFIM-AHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVH 328 (368)
Q Consensus 251 ~~~~~-~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~ 328 (368)
...+. ..-.....|++++++..|+.+.. .+. |...|+...... .+... ......+|++..+ .++++-...+.|.
T Consensus 162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~-I~~~~~dG~~~~-~~~~~-~~~~P~gi~~~~~-~ly~td~~~~~V~ 237 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTNRQ-AVVKG-SLPHPFALTLFED-ILYWTDWSTHSIL 237 (619)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEETTTCC-EEEESSSCCEEC-----------CCCEEESSS-EEEEECTTTCSEE
T ss_pred eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe-EEEecCCCCccE-EEEeC-CCCCceEEEEeCC-EEEEecCCCCEEE
Confidence 44432 23345789999987666655544 456 888887543332 22211 1122346677654 3333434567788
Q ss_pred EEEccCCCCC
Q 017642 329 VFNLKVNSGS 338 (368)
Q Consensus 329 iwd~~~~~~~ 338 (368)
..|..+++..
T Consensus 238 ~~d~~tg~~~ 247 (619)
T 3s94_A 238 ACNKYTGEGL 247 (619)
T ss_dssp EEESSSCCCC
T ss_pred EEECCCCccc
Confidence 8888777654
No 295
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.99 E-value=0.0005 Score=62.04 Aligned_cols=152 Identities=11% Similarity=0.117 Sum_probs=94.1
Q ss_pred ceeEEEEeeC---ccEEEeC--CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCC---CCeEEEEecCc
Q 017642 177 EVRSVKLRRD---RIIVVLE--QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ---KGQVRVEHYAS 248 (368)
Q Consensus 177 ~v~~~~~~~~---~~~l~~d--~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~---dg~i~i~~~~~ 248 (368)
....++++++ +.+++.| +.|+.+|..+++..... ........++++++++ ++++-.+.. .+.+.+ ....
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~-~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLF-TRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEE-CGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEE-ECCC
Confidence 4568999984 6666633 79999999887765443 3444567899999998 665542211 122222 2222
Q ss_pred cee--eeeeccCcceEEEEECC-CCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE-eCC
Q 017642 249 KRT--KFIMAHDSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS-SDK 324 (368)
Q Consensus 249 ~~~--~~~~~~~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~-s~d 324 (368)
... ..+. .......+++++ +|.++++-..++. |+.+|..+++....+........-..|+|+|+|++|+.+ ...
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~-V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAM-ISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSE-EEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCE-EEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 111 1121 233456788999 6766666666777 999998877763333221112233579999999955554 466
Q ss_pred CeEEEEEcc
Q 017642 325 GTVHVFNLK 333 (368)
Q Consensus 325 g~i~iwd~~ 333 (368)
+.|+.+++.
T Consensus 295 ~~I~~~~~d 303 (433)
T 4hw6_A 295 HCIYRVDYN 303 (433)
T ss_dssp TEEEEEEBC
T ss_pred CEEEEEeCC
Confidence 789998875
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.96 E-value=0.014 Score=55.29 Aligned_cols=199 Identities=9% Similarity=-0.054 Sum_probs=118.3
Q ss_pred CCEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCcceEEEcccC-CceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEe
Q 017642 86 PTLLHISFNQDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERG-GGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
..+..|+|.+.+..|..+. .+.|..++++..... ..+..+ ....-+++.|..+.++++-... +.|.+.+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~--~v~~~g~~~P~GlAvD~~~~~LY~tD~~~------~~I~v~~ 108 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE--HVVEFGLDYPEGMAVDWLGKNLYWADTGT------NRIEVSK 108 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE--EEECSSCSCCCEEEEETTTTEEEEEETTT------TEEEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE--EEEeCCCCCcceEEEEeCCCEEEEEECCC------CEEEEEe
Confidence 3578999999877776666 556888887654332 222101 1222334444445555554433 7899999
Q ss_pred CCCCcEEEEE-ecCCceeEEEEeeC-ccEEEe----CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecC
Q 017642 163 DHQSRCIGEL-SFRSEVRSVKLRRD-RIIVVL----EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 163 ~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~----d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
+........+ ..-.....+++.|. |.+.+. .+.|...++.... ...+-.....-..+++.++++.++++- .
T Consensus 109 ~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD--~ 185 (628)
T 4a0p_A 109 LDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTD--L 185 (628)
T ss_dssp TTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEE--T
T ss_pred cCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEE--C
Confidence 7654433233 24456789999984 554443 3578888875433 333323334556799999988877764 3
Q ss_pred CCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEee
Q 017642 237 QKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEV 297 (368)
Q Consensus 237 ~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~ 297 (368)
..+.|...+.++.....+.........|++.. +.++++-...+. |...|..+++....+
T Consensus 186 ~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 186 DTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQNRTII 244 (628)
T ss_dssp TTTEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEE
T ss_pred CCCEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCceEEE
Confidence 46778776666644444444444556788764 444444444666 888887776544333
No 297
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.90 E-value=7.7e-05 Score=71.64 Aligned_cols=200 Identities=9% Similarity=-0.052 Sum_probs=114.1
Q ss_pred CCEEEEEEcCCCCEEEEEe--CCeEEEEEecC----CCcceEEEcccCCceeEEEEEEe--CCeEEEEecCCCCCCCCCc
Q 017642 86 PTLLHISFNQDHGCFAAGT--DHGFRIYNCDP----FREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQYPLNK 157 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~d~~~~~~~ 157 (368)
..+..|+|.+.+..|.... .+.|+.++++. .... ..+. ........++++ .+.+++ +.... +.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~--~~i~-~~~~~P~glavD~~~g~LY~-tD~~~-----~~ 476 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD--TVIS-RDIQAPDGLAVDWIHSNIYW-TDSVL-----GT 476 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCC--CBCC-SCC--CCCEECCCSSSBCEE-CCTTT-----SC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceE--EEEe-CCCCCcceEEEEeeCCcEEE-EeccC-----Ce
Confidence 3566789998877777766 45588888764 1111 1111 111112234444 333443 33333 78
Q ss_pred EEEEeCCCCcEEEEEe-cCCceeEEEEeeCcc-EEEeC----CcEEEEEcCCCeEEEEE-eccCCCeeEEEEecCCCeEE
Q 017642 158 VMIWDDHQSRCIGELS-FRSEVRSVKLRRDRI-IVVLE----QKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 158 i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~d----~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~ 230 (368)
|.++++........+. .......+++.|.+. +++.| +.|.++++.. .....+ ......-..++|+++++.+|
T Consensus 477 I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 477 VSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp EEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTTCCEE
T ss_pred EEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccCCEEE
Confidence 9999976554433333 235578889998644 44422 6788887743 222222 22223345699999988877
Q ss_pred EEeecCCCCeEEEEecCcceeeeeec---cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe
Q 017642 231 LVCPGLQKGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR 299 (368)
Q Consensus 231 l~~~g~~dg~i~i~~~~~~~~~~~~~---~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~ 299 (368)
++- ...+.|...+.++.....+.. .......|++..+ .++++....+. |..+|..+++.+..+..
T Consensus 556 ~aD--~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 556 WVD--SKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEE--TTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEEEECCCT
T ss_pred EEe--cCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCceEEeec
Confidence 764 346778876666544443322 1123345666443 44555555667 99999888887766654
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.89 E-value=0.0063 Score=51.92 Aligned_cols=188 Identities=5% Similarity=0.026 Sum_probs=110.9
Q ss_pred EEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEE-Eec-------CCceeEEEE---eeCccEEE-e--------
Q 017642 134 EMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGE-LSF-------RSEVRSVKL---RRDRIIVV-L-------- 192 (368)
Q Consensus 134 ~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~-~~~-------~~~v~~~~~---~~~~~~l~-~-------- 192 (368)
+..|+. ++.++++.-.. ++|..||...+..... +.. ...+..+.| .+++++++ .
T Consensus 17 ~~~wd~~~g~~~vs~l~~-----g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYK-----GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CEEEETTTTEEEEEETTT-----TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred CccCcCCCCEEEEEeccC-----CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 456655 45555665444 9999999876644333 212 114679999 68887776 2
Q ss_pred -------CCcEEEEEcC---CCeEEEEEecc-------------CCCeeEEEEecCCCeEEEEeecCCC-CeEEEEecCc
Q 017642 193 -------EQKIFVYNFA---DLKLLHQIETI-------------ANPKGLCAVSQGVGSLVLVCPGLQK-GQVRVEHYAS 248 (368)
Q Consensus 193 -------d~~i~vwd~~---~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~l~~~g~~d-g~i~i~~~~~ 248 (368)
+..|..||+. +++.+...... ......+++.++|+. |+. ++.. +.|...+.++
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gna-YVt--~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNS-YVA--FALGMPAIARVSADG 168 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCE-EEE--EEESSCEEEEECTTS
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCE-EEe--CCCCCCeEEEEeCCC
Confidence 3679999998 78776655411 123567888888875 332 3334 5555555555
Q ss_pred ceeeeee------ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEe---cc--CcccEEEE-EEecCCC
Q 017642 249 KRTKFIM------AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRR---GA--DRAEIYSL-AFSSNAQ 316 (368)
Q Consensus 249 ~~~~~~~------~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~---~~--~~~~v~~l-~~sp~~~ 316 (368)
+.+..+. ......+.|+++|+|+.|++....|. |..+|+.+.... .+.. +. .-.....| ..-.+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~pv~~-~v~~~~~G~~~~~~~~dgilp~~~~G~ 246 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSKPYAW-PEPVKINGDFGTLSGTEKIVTVPVGNE 246 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSSSSCC-CEECEESSCCCCCTTEEEEEEEEETTE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCCCcce-eecccccCCcccccCcccccccccCCE
Confidence 4333322 11223678999999998888877888 999998843220 1221 10 01123343 3345777
Q ss_pred EE-EEEeCCCeEEEEE
Q 017642 317 WL-AVSSDKGTVHVFN 331 (368)
Q Consensus 317 ~l-~s~s~dg~i~iwd 331 (368)
.| ++....+.+.+.+
T Consensus 247 vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 247 SVLVGARAPYAISFRS 262 (334)
T ss_dssp EEEEEEETTEEEEEEC
T ss_pred EEEEEcCCCCEEEEEC
Confidence 74 4444555444443
No 299
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.64 E-value=0.026 Score=49.18 Aligned_cols=227 Identities=12% Similarity=0.056 Sum_probs=117.2
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcc--cCCceeEEEEEEeCC-----eEEEEecCCCCCCCCCcE
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCN-----ILALVGGGPDPQYPLNKV 158 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~s~~~d~~~~~~~i 158 (368)
..-..|+|.|+|+++++-..+.|.+++ .++......+. .........++++++ .++++...... -..+.|
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~-~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG-GLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT-SSEEEE
T ss_pred CCceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC-CCccEE
Confidence 356799999999977665577788887 33322111111 123456788899987 34444332100 000357
Q ss_pred EEEeCCCCc-----EEE-EEec-C---CceeEEEEeeCccEEEeC----------------CcEEEEEcCCC--------
Q 017642 159 MIWDDHQSR-----CIG-ELSF-R---SEVRSVKLRRDRIIVVLE----------------QKIFVYNFADL-------- 204 (368)
Q Consensus 159 ~vwd~~~~~-----~~~-~~~~-~---~~v~~~~~~~~~~~l~~d----------------~~i~vwd~~~~-------- 204 (368)
..|+...+. .+. .+.. . .....++|.|||.+.+.+ +.|..++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 777766432 111 1221 1 234689999999777732 34555554320
Q ss_pred ----eEEEEE-eccCCCeeEEEEecCCCeEEEEeecCCCC-------eEEEEecCc-----------------ceeeeee
Q 017642 205 ----KLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKG-------QVRVEHYAS-----------------KRTKFIM 255 (368)
Q Consensus 205 ----~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~~dg-------~i~i~~~~~-----------------~~~~~~~ 255 (368)
.....+ .++.+ ...++|+++...++++-.| .+. .|.+..... ..+..+
T Consensus 188 ~~~~~~~~i~a~G~rn-p~g~a~d~~~g~l~v~d~g-~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~- 264 (352)
T 2ism_A 188 GRRGARPEVYSLGHRN-PQGLAWHPKTGELFSSEHG-PSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW- 264 (352)
T ss_dssp TCTTSCTTEEEECCSE-ECCCEECTTTCCEEEEEEC-C------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-
T ss_pred CCCCCCccEEEEcCCC-cccEEEECCCCCEEEEEcC-CCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-
Confidence 011111 12222 3457899855555655433 232 233211111 111122
Q ss_pred ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCce------eEeeEeccCcccEEEEEEecCCCEEEEEe
Q 017642 256 AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL------LQEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (368)
Q Consensus 256 ~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~------~~~~~~~~~~~~v~~l~~sp~~~~l~s~s 322 (368)
.+......++| .+|.++++.-..+. |...++..... ...+.. ....+..+++.|||.++++..
T Consensus 265 ~~~~ap~G~~~-~~G~l~v~~~~~~~-v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDLYVAGLRGQA-LLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-ETTEEEEEETTTTE-EEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-ECCEEEEEECCCCE-EEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEe
Confidence 12234567777 46766555555555 77777654331 122222 235789999999998776653
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.64 E-value=0.044 Score=51.70 Aligned_cols=224 Identities=7% Similarity=-0.041 Sum_probs=127.0
Q ss_pred EEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeC-CeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe-cCC
Q 017642 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRC-NILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS-FRS 176 (368)
Q Consensus 99 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~-~~~ 176 (368)
+|+.+..+.|+..+++....... .+....-.....+.+++ ++.++++.... +.|+.+++........+. .-.
T Consensus 319 ~Ll~~~~~~i~~i~l~~~~~~~~-~~~~~~l~~~~~ld~d~~~~~ly~sD~~~-----~~I~r~~~~g~~~~~v~~~~~~ 392 (619)
T 3s94_A 319 LLLLARRTDLRRISLDTPDFTDI-VLQLEDIRHAIAIDYDPVEGYIYWTDDEV-----RAIRRSFIDGSGSQFVVTAQIA 392 (619)
T ss_dssp EEEEEESSCEEEEESSSTTCCCE-ECCCSCCSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEEcccceEEEecCCCcccee-EEeccccCccEEEEEEcCCCeEEEEeCCC-----CeEEEEEcCCCccEEEEECCCC
Confidence 56666666787777765443211 11112234567888886 34444444333 789999976544333333 335
Q ss_pred ceeEEEEeeC-ccEEE---eCCcEEEEEcCCCeEEEEE-eccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCccee
Q 017642 177 EVRSVKLRRD-RIIVV---LEQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRT 251 (368)
Q Consensus 177 ~v~~~~~~~~-~~~l~---~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~ 251 (368)
....+++... +.+.+ ..+.|.+.++.... ...+ ......-..+++.|....++++-.| ..+.|.....++...
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~g-~~~~I~r~~~dG~~~ 470 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDWG-EIPKIERAALDGSDR 470 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSC
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecCC-CCCEEEEEccCCCcc
Confidence 6788999864 43333 35789999986443 3333 2333456779999986666654322 245666555555443
Q ss_pred eee-eccCcceEEEEECCCCCEEEEEeCC-CcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE-eCCCeEE
Q 017642 252 KFI-MAHDSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS-SDKGTVH 328 (368)
Q Consensus 252 ~~~-~~~~~~i~~v~~sp~g~~l~s~~~d-g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~-s~dg~i~ 328 (368)
..+ ...-...+.|++++++..|+.+... +. |..+++.... ...+... .-....+|+...+ .|+.. ...+.|.
T Consensus 471 ~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~-I~~~~~dG~~-~~~~~~~-~l~~P~glav~~~--~ly~tD~~~~~I~ 545 (619)
T 3s94_A 471 VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDK-IEVMNTDGTG-RRVLVED-KIPHIFGFTLLGD--YVYWTDWQRRSIE 545 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEESSSCC-CEEEEEC-CCCSSCCEEEETT--EEEEECTTSSCEE
T ss_pred EEEEeCCCCCCeeeEEcccCCEEEEEECCCCE-EEEEecCCCc-eEEEecc-CCCCcEEEEEECC--EEEEeecCCCeEE
Confidence 333 2234567899999877766666554 55 8889875433 3233211 1122345555433 44444 3455677
Q ss_pred EEEccCC
Q 017642 329 VFNLKVN 335 (368)
Q Consensus 329 iwd~~~~ 335 (368)
..|..++
T Consensus 546 ~~~k~~g 552 (619)
T 3s94_A 546 RVHKRSA 552 (619)
T ss_dssp EEESSSC
T ss_pred EEEcCCC
Confidence 7776665
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.61 E-value=0.027 Score=48.51 Aligned_cols=188 Identities=13% Similarity=0.190 Sum_probs=107.8
Q ss_pred CCEEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEE----eCCe--EEEEecCC--CCCCCCCcEEEEeC--CC
Q 017642 97 HGCFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF----RCNI--LALVGGGP--DPQYPLNKVMIWDD--HQ 165 (368)
Q Consensus 97 g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~s~~~--d~~~~~~~i~vwd~--~~ 165 (368)
..+++... ++++.+||+ .++.. ..+. .....-+.+.. .... +++++... + ++|.+|++ .+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l--~~~~-~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~-----n~l~vf~iDp~~ 110 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKML--HSYN-TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGK-----NTIEIYAIDGKN 110 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEE--EEEC-CSCEEEEEEEEEEEETTEEEEEEEEEECSTTC-----CEEEEEEECTTT
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEE--EEcc-CCCcccEEEecccccCCceEeEEEEeCCCCCC-----CeEEEEEECCCC
Confidence 34443333 777999999 44443 3342 23333333332 1111 45566554 5 89999966 34
Q ss_pred CcEEEEEe-------cC-CceeEEEE--eeC-cc-EEE---eCCcEEEEEcC-------CCeEEEEEeccCCCeeEEEEe
Q 017642 166 SRCIGELS-------FR-SEVRSVKL--RRD-RI-IVV---LEQKIFVYNFA-------DLKLLHQIETIANPKGLCAVS 223 (368)
Q Consensus 166 ~~~~~~~~-------~~-~~v~~~~~--~~~-~~-~l~---~d~~i~vwd~~-------~~~~~~~~~~~~~~v~~~~~~ 223 (368)
++ +..+. .. ..+..+++ ++. +. +++ .+|.+..|++. +.+.++++... ..+..|...
T Consensus 111 ~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvD 188 (355)
T 3amr_A 111 GT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAAD 188 (355)
T ss_dssp CC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEE
T ss_pred Cc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEc
Confidence 43 44442 11 56777887 553 43 333 57899999882 34667777653 467778888
Q ss_pred cCCCeEEEEeecCCCCeEEEEecC------cceeeeee-c-cCcceEEEEE--CCCCC-EEEEEe-CCCcEEEEEECC-C
Q 017642 224 QGVGSLVLVCPGLQKGQVRVEHYA------SKRTKFIM-A-HDSRIACFAL--TQDGQ-LLATSS-TKGTLVRIFNTL-D 290 (368)
Q Consensus 224 ~~~~~~~l~~~g~~dg~i~i~~~~------~~~~~~~~-~-~~~~i~~v~~--sp~g~-~l~s~~-~dg~~i~iwd~~-~ 290 (368)
+....+++. .++.-|..++.. ...+..+. + -...+..|++ .++++ ||++++ .+.. ..|||.. +
T Consensus 189 d~~g~Lyv~---eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s-~~Vydr~~~ 264 (355)
T 3amr_A 189 DEYGRLYIA---EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS-YAIYDRQGK 264 (355)
T ss_dssp TTTTEEEEE---ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE-EEEEESSTT
T ss_pred CCCCeEEEe---cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE-EEEEECCCC
Confidence 877776653 345333333322 12332221 2 2236788887 56666 666666 4556 9999996 6
Q ss_pred CceeEeeEe
Q 017642 291 GTLLQEVRR 299 (368)
Q Consensus 291 ~~~~~~~~~ 299 (368)
.+.+..|..
T Consensus 265 ~~~vg~f~I 273 (355)
T 3amr_A 265 NKYVADFRI 273 (355)
T ss_dssp CCEEEEEEE
T ss_pred CcEEEEEEe
Confidence 777777763
No 302
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.56 E-value=0.0091 Score=52.64 Aligned_cols=133 Identities=17% Similarity=0.186 Sum_probs=85.9
Q ss_pred eCCcEEEEEcCCCeEEEEEecc----CCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-c---c---------eeeee
Q 017642 192 LEQKIFVYNFADLKLLHQIETI----ANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-S---K---------RTKFI 254 (368)
Q Consensus 192 ~d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~---~---------~~~~~ 254 (368)
.++.||.-++......+.+... ...+..+.++|+|+.+.++ | +..|.|-... + . ..+.+
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~--g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty 114 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF--N--DNEIFVMEVPWGYSNVEDVSIQDAFQIFHY 114 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE--C--SSEEEEEECCTTCSCCCCHHHHHTTEEEEE
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe--c--CCeEEEEEecCccccCcccccccccceeEE
Confidence 7888888888754445555443 2357779999999964443 4 4566662221 1 1 11122
Q ss_pred ec------cCcceEEEEECCCC---CEEEEEeCCCcEEEEEECCCCc--eeEeeEe-------ccCcccEEEEEEecCCC
Q 017642 255 MA------HDSRIACFALTQDG---QLLATSSTKGTLVRIFNTLDGT--LLQEVRR-------GADRAEIYSLAFSSNAQ 316 (368)
Q Consensus 255 ~~------~~~~i~~v~~sp~g---~~l~s~~~dg~~i~iwd~~~~~--~~~~~~~-------~~~~~~v~~l~~sp~~~ 316 (368)
.- ...+|..+.|||-+ ..|++-..|+. |++||+.... +. .+.. ......|.+++|..++-
T Consensus 115 ~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~l 192 (452)
T 3pbp_A 115 SIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGL 192 (452)
T ss_dssp EGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSS
T ss_pred EcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCc
Confidence 21 24679999999954 48999999999 9999998522 22 2221 11225789999999887
Q ss_pred EEEEEe--CCCeEEEE
Q 017642 317 WLAVSS--DKGTVHVF 330 (368)
Q Consensus 317 ~l~s~s--~dg~i~iw 330 (368)
.|...+ .+|.|+-.
T Consensus 193 TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 193 TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEECTTSCEEEEE
T ss_pred EEEEEecCCCCCEEEE
Confidence 777655 77877643
No 303
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.50 E-value=0.082 Score=51.27 Aligned_cols=228 Identities=13% Similarity=0.147 Sum_probs=127.2
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
...|.+|.-..+|.+- .|+.+++..||-...... ..........+.++..+.++.+.++.. +-+..||..
T Consensus 21 ~n~V~~I~qD~~G~lW-igT~~GL~ryDG~~~~~~--~~~~~~~~~~i~~i~~d~~g~lWigT~-------~Gl~~yd~~ 90 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIW-IGSNKGLFSYDGYSTQQH--FTYGENNNTRIYCGVIIDNTYLYMGTD-------NGILVYNYR 90 (758)
T ss_dssp CCCEEEEEECTTSCEE-EEESSCEEEECSSCEEEC--SCTTSTTSSCEEEEEEETTTEEEEEET-------TEEEEEETT
T ss_pred cceEEEEEECCCCCEE-EEECCCccccCCCceEEE--EccCCCCCceEEEEEEcCCCcEEEEeC-------CCeEEEeCC
Confidence 5679999888887644 466678888873221110 000001234577777777665555443 458899987
Q ss_pred CCcEEEEEe-cCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEe-----ccCCCeeEEEEecCCCeEEEEeecCC
Q 017642 165 QSRCIGELS-FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIE-----TIANPKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 165 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
+.+...... ....|.++.. .++.+.+ ..+.|..+|..+++.. .+. .....|.++....++. +++++ .
T Consensus 91 ~~~f~~~~~~~~~~i~~i~~-~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~-lWigt---~ 164 (758)
T 3ott_A 91 ADRYEQPETDFPTDVRTMAL-QGDTLWLGALNGLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ-IYVGT---Y 164 (758)
T ss_dssp TTEECCCSCCCCSCEEEEEE-ETTEEEEEETTEEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC-EEEEE---T
T ss_pred CCEEECcccCCCceEEEEEe-cCCcEEEEcCCcceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC-EEEEe---C
Confidence 764322111 2335666654 4555554 6668999998766543 231 1123455555555554 34432 3
Q ss_pred CCeEEEEecCcceeeeeec------cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEE
Q 017642 238 KGQVRVEHYASKRTKFIMA------HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAF 311 (368)
Q Consensus 238 dg~i~i~~~~~~~~~~~~~------~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 311 (368)
+|.. .++........+.. ....|.++....++..|..|+. +. |..+|..+++.. .+... ....|.++..
T Consensus 165 ~Gl~-~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G-l~~~~~~~~~~~-~~~~l-~~~~i~~i~~ 239 (758)
T 3ott_A 165 NGLC-RYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY-LFQYFPSTGQIK-QTEAF-HNNSIKSLAL 239 (758)
T ss_dssp TEEE-EEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE-EEEEETTTTEEE-EEEEE-EEEEEEEEEE
T ss_pred CCHh-hCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC-CeEEcCCCCeEE-eccCC-CCCeEEEEEE
Confidence 4543 34433333222211 1224888888777765555654 45 889998766543 22211 2346888888
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCC
Q 017642 312 SSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 312 sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
..+|.+.+. +.+ -|.+++..++
T Consensus 240 d~~g~lWig-T~~-Gl~~~~~~~~ 261 (758)
T 3ott_A 240 DGNGDLLAG-TDN-GLYVYHNDTT 261 (758)
T ss_dssp CTTCCEEEE-ETT-EEEEECCTTS
T ss_pred cCCCCEEEE-eCC-ceeEEecCCC
Confidence 888876654 444 4888887654
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.48 E-value=0.0067 Score=55.16 Aligned_cols=156 Identities=10% Similarity=0.075 Sum_probs=91.5
Q ss_pred ceeEEEEeeC--ccEEE-e--CCcEEEEEcCCCeEEEEEeccC---CCeeEEEE-------ecCCCeEEEEeecCC----
Q 017642 177 EVRSVKLRRD--RIIVV-L--EQKIFVYNFADLKLLHQIETIA---NPKGLCAV-------SQGVGSLVLVCPGLQ---- 237 (368)
Q Consensus 177 ~v~~~~~~~~--~~~l~-~--d~~i~vwd~~~~~~~~~~~~~~---~~v~~~~~-------~~~~~~~~l~~~g~~---- 237 (368)
....|+|.|. +.+++ . .+.|++.|++++.....+.... .....++| +++++.++++.....
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568899973 44444 2 3579999998877655443321 23577899 999987666542210
Q ss_pred CCeEEEEecCc--cee-----eeeeccCcceEEEEECCC-CCEEEEEeCCCcEEEEEECC-------CCce---------
Q 017642 238 KGQVRVEHYAS--KRT-----KFIMAHDSRIACFALTQD-GQLLATSSTKGTLVRIFNTL-------DGTL--------- 293 (368)
Q Consensus 238 dg~i~i~~~~~--~~~-----~~~~~~~~~i~~v~~sp~-g~~l~s~~~dg~~i~iwd~~-------~~~~--------- 293 (368)
...|.+.+... ... ..+... .....++++|+ +.++++-..++. |..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeecccccccc
Confidence 11233332222 111 122222 23457888995 555556667777 9999987 5543
Q ss_pred --eEeeEeccCcccEEEEEEecCCCEEEEE-eCCCeEEEEEccC
Q 017642 294 --LQEVRRGADRAEIYSLAFSSNAQWLAVS-SDKGTVHVFNLKV 334 (368)
Q Consensus 294 --~~~~~~~~~~~~v~~l~~sp~~~~l~s~-s~dg~i~iwd~~~ 334 (368)
...+...........|+|+|+|++|+.+ +....|+.++...
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 1122111123456899999999965544 5667888877643
No 305
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.47 E-value=0.0049 Score=62.34 Aligned_cols=231 Identities=13% Similarity=0.166 Sum_probs=135.5
Q ss_pred EEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEE-eCCeEEEEecCCCCCCCCCcEEEEeCCCC-cEE
Q 017642 92 SFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF-RCNILALVGGGPDPQYPLNKVMIWDDHQS-RCI 169 (368)
Q Consensus 92 ~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~d~~~~~~~i~vwd~~~~-~~~ 169 (368)
-.+|..+.+|.-....+.|+|+++........+ ...|.-|.| +++.+.+++. ..|+-|++... .++
T Consensus 72 IMnP~~~iiALrag~~lQiFnl~~k~klks~~~----~e~VvfWkWis~~~l~lVT~--------~aVyHW~~~~~s~P~ 139 (1630)
T 1xi4_A 72 IMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM----TDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQPV 139 (1630)
T ss_pred ccCCCcceEEEecCCeEEEeehHHhhhhccccc----CCCceEEEecCCCeeEEEcC--------CeEEEeccCCCCccH
Confidence 456777777766666799999987666644333 345677777 4567777775 57999998642 344
Q ss_pred EEEe-c----CCceeEEEEeeCccEEE----------eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCC--CeEE-E
Q 017642 170 GELS-F----RSEVRSVKLRRDRIIVV----------LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGV--GSLV-L 231 (368)
Q Consensus 170 ~~~~-~----~~~v~~~~~~~~~~~l~----------~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~-l 231 (368)
+.+. | ...|..-..+++.++++ ..|.+.+|..+.+ ..+.+++|......+.+.... ..++ +
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEE
Confidence 4443 2 45677778888888887 2588999998644 345556665544333332111 1111 1
Q ss_pred EeecCCCCeEEEEecC----ccee------eeee---ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 232 VCPGLQKGQVRVEHYA----SKRT------KFIM---AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~----~~~~------~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
+......+.++|-... +... ..+. .-..-..++..++....+...+.-|. |.++|+.++.++..-+
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhhhcc
Confidence 1111123566663221 1111 0111 11233456777877778888889999 9999999999886655
Q ss_pred eccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 299 RGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 299 ~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
- ....|...+-.....=++.....|.|.--.++...-.
T Consensus 298 i--s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 298 I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred c--cCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 4 2334444443333233334446666665555554433
No 306
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.45 E-value=0.045 Score=47.11 Aligned_cols=229 Identities=10% Similarity=-0.006 Sum_probs=121.6
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEccc-CCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFER-GGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
...+.+|.|.+ +..++++..+.| |....+.......... .....+..+.+.+++..++.+.. +.|..-+
T Consensus 79 ~~~~~~i~~~~-~~~~~~g~~g~i--~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~- 148 (327)
T 2xbg_A 79 DYRFNSVSFQG-NEGWIVGEPPIM--LHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV------GAIYRTK- 148 (327)
T ss_dssp CCEEEEEEEET-TEEEEEEETTEE--EEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT------CCEEEES-
T ss_pred CccEEEEEecC-CeEEEEECCCeE--EEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC------ccEEEEc-
Confidence 34688999986 555566556544 3333333333222110 11233556666554555555443 5443221
Q ss_pred CCCcEEEEEe--cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEE-eccCCCeeEEEEecCCCeEEEEeecCCC
Q 017642 164 HQSRCIGELS--FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQK 238 (368)
Q Consensus 164 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~~d 238 (368)
..|+.-.... ....+..+.+.+++.+++ .++.++.-+-..++.-..+ ......+..+.+.+++. ++++. .+
T Consensus 149 DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~~~~---~~ 224 (327)
T 2xbg_A 149 DSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LWMIV---NG 224 (327)
T ss_dssp STTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EEEEE---TT
T ss_pred CCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EEEEe---CC
Confidence 2333222222 456788999999888877 3555554431112221111 12344667788888775 33322 46
Q ss_pred CeEEEEecC-cceeeeee----ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec-cCcccEEEEEEe
Q 017642 239 GQVRVEHYA-SKRTKFIM----AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLAFS 312 (368)
Q Consensus 239 g~i~i~~~~-~~~~~~~~----~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s 312 (368)
|.+++...+ +..-..+. .+...+..+.+.+++.+++++. +|. | ++....|+.-..+... .....+.++.|.
T Consensus 225 G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~-i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~ 301 (327)
T 2xbg_A 225 GKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGA-L-LCSQDGGQTWQQDVDVKKVPSNFYKILFF 301 (327)
T ss_dssp TEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTC-E-EEESSTTSSCEECGGGTTSSSCCCEEEEE
T ss_pred ceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCe-E-EEeCCCCcccEEcCccCCCCCCeEEEEEE
Confidence 777665322 22222222 1223588999998887666654 676 5 4555556555444321 123467889997
Q ss_pred cCCCEEEEEeCCCeEEEEE
Q 017642 313 SNAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 313 p~~~~l~s~s~dg~i~iwd 331 (368)
+++. +++++.+|.|.-++
T Consensus 302 ~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 302 SPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp ETTE-EEEECSTTEEEEEC
T ss_pred CCCc-eEEEcCCceEEEEc
Confidence 6555 55667789776654
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.45 E-value=0.048 Score=47.37 Aligned_cols=203 Identities=7% Similarity=0.060 Sum_probs=106.9
Q ss_pred CEEEEEEcCCCCEEEEE-------------eCCeEEEEEecCCCc-ceEEEccc----CCceeEEEEEEeC----CeEEE
Q 017642 87 TLLHISFNQDHGCFAAG-------------TDHGFRIYNCDPFRE-IFRRDFER----GGGIGVVEMLFRC----NILAL 144 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~-------------~d~~i~iw~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~----~~~~~ 144 (368)
..-.+...++|..++++ .++.|.++|.++... .....+.. ........+.+.. ...++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34455677888776665 356699999864221 11112211 1122344444422 22333
Q ss_pred EecCCCCCCCCCcEEEEeCCCC-cE---EEEEec--CCceeEEEEeeCccEEEe------C--------------CcEEE
Q 017642 145 VGGGPDPQYPLNKVMIWDDHQS-RC---IGELSF--RSEVRSVKLRRDRIIVVL------E--------------QKIFV 198 (368)
Q Consensus 145 ~s~~~d~~~~~~~i~vwd~~~~-~~---~~~~~~--~~~v~~~~~~~~~~~l~~------d--------------~~i~v 198 (368)
+..... .+..|.+|++..+ .. +..+.+ -...+++.+.++|.+.+. | |.|+.
T Consensus 131 Vvnh~~---~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 131 VVNHPG---SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEECST---TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEECCC---CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 332220 1267778776543 22 223332 235789999999987661 1 33444
Q ss_pred EEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC--cc--eeeeeeccCcceEEEEECC-CCCEE
Q 017642 199 YNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA--SK--RTKFIMAHDSRIACFALTQ-DGQLL 273 (368)
Q Consensus 199 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~--~~--~~~~~~~~~~~i~~v~~sp-~g~~l 273 (368)
+|. ++. +.+...-..-+.++|+||++.++++-+ ..+.|..++.. +. ....+ ...+....+++.+ +|++.
T Consensus 208 ~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 208 YSP--NDV-RVVAEGFDFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp ECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEE
T ss_pred EEC--CeE-EEeecCCcccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEE
Confidence 443 332 222222334567999999998877653 45777775443 21 12223 2345678899999 59977
Q ss_pred EEEeCCCcEEEEEECC--CCceeEeeE
Q 017642 274 ATSSTKGTLVRIFNTL--DGTLLQEVR 298 (368)
Q Consensus 274 ~s~~~dg~~i~iwd~~--~~~~~~~~~ 298 (368)
+++..++..|..||-. .+..+..++
T Consensus 282 va~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 282 VGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEecCCceEEEEECCCCCCCCEEEEEE
Confidence 7666554214444433 234444444
No 308
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.41 E-value=0.0048 Score=62.45 Aligned_cols=220 Identities=10% Similarity=0.101 Sum_probs=136.4
Q ss_pred eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeC
Q 017642 107 GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRD 186 (368)
Q Consensus 107 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~ 186 (368)
.|.|.|+.......++.+. .... .-+|...+++--.. .++.|+|+++...++.+.....|.--.|-.+
T Consensus 49 ~vvIidl~~~~~~~rrpi~--AdsA----IMnP~~~iiALrag------~~lQiFnl~~k~klks~~~~e~VvfWkWis~ 116 (1630)
T 1xi4_A 49 QVVIIDMNDPSNPIRRPIS--ADSA----IMNPASKVIALKAG------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 116 (1630)
T ss_pred eEEEEECCCCCCccccccc--chhh----ccCCCcceEEEecC------CeEEEeehHHhhhhcccccCCCceEEEecCC
Confidence 4888998876665444432 2111 12333333332222 7899999999999999887788888888766
Q ss_pred ccEEE-eCCcEEEEEcCC-CeEEEEEecc----CCCeeEEEEecCCCeEEEEee----cCCCCeEEEEecCcceeeeeec
Q 017642 187 RIIVV-LEQKIFVYNFAD-LKLLHQIETI----ANPKGLCAVSQGVGSLVLVCP----GLQKGQVRVEHYASKRTKFIMA 256 (368)
Q Consensus 187 ~~~l~-~d~~i~vwd~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~----g~~dg~i~i~~~~~~~~~~~~~ 256 (368)
..+.+ .+..|+.|++.. ..+.+.+..| ...|.....+++.++++++.- |.-.|.+.++....+..+.+.+
T Consensus 117 ~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ieg 196 (1630)
T 1xi4_A 117 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 196 (1630)
T ss_pred CeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhH
Confidence 55544 899999999964 2333333333 334555666777777665432 2245777788888787788888
Q ss_pred cCcceEEEEECC--C-CCEEEEEeC---CCcEEEEEECCCC---ceeE-----e--eEeccCcccEEEEEEecCCCEEEE
Q 017642 257 HDSRIACFALTQ--D-GQLLATSST---KGTLVRIFNTLDG---TLLQ-----E--VRRGADRAEIYSLAFSSNAQWLAV 320 (368)
Q Consensus 257 ~~~~i~~v~~sp--~-g~~l~s~~~---dg~~i~iwd~~~~---~~~~-----~--~~~~~~~~~v~~l~~sp~~~~l~s 320 (368)
|.+.-..+.... . ..+++.+.. .+. ++|-++... .... . +....-..-..++..++.-..+..
T Consensus 197 ha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k-Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 197 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred hHhhhheeccCCCCCCceEEEEEEecCCCce-EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 876655544421 1 223333322 256 999998542 1110 0 111001123456777887778888
Q ss_pred EeCCCeEEEEEccCCCCCC
Q 017642 321 SSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 321 ~s~dg~i~iwd~~~~~~~~ 339 (368)
.+.-|.|++||+.++...=
T Consensus 276 itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EecCceEEEEecccchhhh
Confidence 8899999999999987653
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.40 E-value=0.056 Score=46.97 Aligned_cols=184 Identities=12% Similarity=0.120 Sum_probs=102.1
Q ss_pred EEEEEeCCeEEEEecCC-CCC------CCCCcEEEEeCCCC-cEEEEEec--------CCceeEEEEee--Ccc--EEEe
Q 017642 133 VEMLFRCNILALVGGGP-DPQ------YPLNKVMIWDDHQS-RCIGELSF--------RSEVRSVKLRR--DRI--IVVL 192 (368)
Q Consensus 133 ~~~~~~~~~~~~~s~~~-d~~------~~~~~i~vwd~~~~-~~~~~~~~--------~~~v~~~~~~~--~~~--~l~~ 192 (368)
-++...+++.++++++. .+. -.+|.|.++|.++. .....+.. .-....+.+.+ ++. +++.
T Consensus 53 EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vv 132 (355)
T 3sre_A 53 EDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVV 132 (355)
T ss_dssp CEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEE
T ss_pred ceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEE
Confidence 34445677777777531 000 02389999998742 12233331 13677788766 342 3332
Q ss_pred -----CCcEEEEEcCCC--e--EEEEEecc-CCCeeEEEEecCCCeEEEEeec----------------CCCCeEEEEec
Q 017642 193 -----EQKIFVYNFADL--K--LLHQIETI-ANPKGLCAVSQGVGSLVLVCPG----------------LQKGQVRVEHY 246 (368)
Q Consensus 193 -----d~~i~vwd~~~~--~--~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~g----------------~~dg~i~i~~~ 246 (368)
+..|.+|++... . .+..+.+. ....+.+.+.++|.. ++... ...|.|..++.
T Consensus 133 nh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~f--yvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 133 NHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHF--YATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp ECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEE--EEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred ECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCE--EecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 567888777442 2 22333321 234567888888862 22211 01233333333
Q ss_pred CcceeeeeeccCcceEEEEECCCCCEEEEEeC-CCcEEEEEECCC-Cce--eEeeEeccCcccEEEEEEec-CCCEEEEE
Q 017642 247 ASKRTKFIMAHDSRIACFALTQDGQLLATSST-KGTLVRIFNTLD-GTL--LQEVRRGADRAEIYSLAFSS-NAQWLAVS 321 (368)
Q Consensus 247 ~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~-dg~~i~iwd~~~-~~~--~~~~~~~~~~~~v~~l~~sp-~~~~l~s~ 321 (368)
..+..+...-...+.|+|+||++.|+.+.. .+. |..|++.. ++. ...+. ..+..-.+++.+ +|++.+++
T Consensus 211 --~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~-I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 211 --NDVRVVAEGFDFANGINISPDGKYVYIAELLAHK-IHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp --TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCCEEEEE
T ss_pred --CeEEEeecCCcccCcceECCCCCEEEEEeCCCCe-EEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCcEEEEe
Confidence 233333333345789999999987776654 556 99999863 332 22332 245678899999 59988766
Q ss_pred eCC
Q 017642 322 SDK 324 (368)
Q Consensus 322 s~d 324 (368)
..+
T Consensus 285 ~~~ 287 (355)
T 3sre_A 285 HPN 287 (355)
T ss_dssp ESC
T ss_pred cCC
Confidence 544
No 310
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.31 E-value=0.026 Score=48.18 Aligned_cols=156 Identities=12% Similarity=0.081 Sum_probs=95.4
Q ss_pred ceeEEEEee-CccEEE---eCCcEEEEEcCCCeEEEE-Eec----cCC--CeeEEEE---ecCCCeEEEEeec-------
Q 017642 177 EVRSVKLRR-DRIIVV---LEQKIFVYNFADLKLLHQ-IET----IAN--PKGLCAV---SQGVGSLVLVCPG------- 235 (368)
Q Consensus 177 ~v~~~~~~~-~~~~l~---~d~~i~vwd~~~~~~~~~-~~~----~~~--~v~~~~~---~~~~~~~~l~~~g------- 235 (368)
--.+++|.+ ++++++ ..++|..||...+..... +.. ... ....+.+ .+++ .+++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEccccccccc
Confidence 445788877 455555 479999999875543333 221 111 2356777 4663 33433210
Q ss_pred ----CCCCeEEEEecC----cceeeeee--cc-----------CcceEEEEECCCCCEEEEEeCC-CcEEEEEECCCCce
Q 017642 236 ----LQKGQVRVEHYA----SKRTKFIM--AH-----------DSRIACFALTQDGQLLATSSTK-GTLVRIFNTLDGTL 293 (368)
Q Consensus 236 ----~~dg~i~i~~~~----~~~~~~~~--~~-----------~~~i~~v~~sp~g~~l~s~~~d-g~~i~iwd~~~~~~ 293 (368)
+.+..+..++.. ++.+.... .. ......|+..++|+..++++.. +. |...+.. |+.
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~-I~rV~pd-G~~ 170 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA-IARVSAD-GKT 170 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE-EEEECTT-SCC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe-EEEEeCC-CCE
Confidence 014555556655 44443322 11 1247899999999988888887 77 7777643 443
Q ss_pred eEeeEec----cCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q 017642 294 LQEVRRG----ADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 294 ~~~~~~~----~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
+..+... ......+.|+++|+|+.|++...+|.|..+|+.+.
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3333211 11224679999999999988877999999998843
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.28 E-value=0.01 Score=52.33 Aligned_cols=114 Identities=11% Similarity=0.117 Sum_probs=76.9
Q ss_pred EEEecCCCeEEEEeecCCCCeEEE-EecCcceeeeeecc----CcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCc--
Q 017642 220 CAVSQGVGSLVLVCPGLQKGQVRV-EHYASKRTKFIMAH----DSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGT-- 292 (368)
Q Consensus 220 ~~~~~~~~~~~l~~~g~~dg~i~i-~~~~~~~~~~~~~~----~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~-- 292 (368)
...+.++..++++. ++.||. ........+.+... -..|..+..+|+|++||..+..+ |.|-.+..+.
T Consensus 26 ~~~~~n~t~i~~a~----~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~--V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQ----DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE--IFVMEVPWGYSN 99 (452)
T ss_dssp EEEETTTTEEEEEE----TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE--EEEEECCTTCSC
T ss_pred EEEEcCCCEEEEEE----CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe--EEEEEecCcccc
Confidence 34566777766654 678887 33323334444332 23578899999999999987764 8998887321
Q ss_pred ----------eeEeeEecc----CcccEEEEEEecC---CCEEEEEeCCCeEEEEEccCCCCCC
Q 017642 293 ----------LLQEVRRGA----DRAEIYSLAFSSN---AQWLAVSSDKGTVHVFNLKVNSGSA 339 (368)
Q Consensus 293 ----------~~~~~~~~~----~~~~v~~l~~sp~---~~~l~s~s~dg~i~iwd~~~~~~~~ 339 (368)
..+.+..+. ...+|..+.|+|- +..|++-..|+.||+||+......|
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P 163 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKP 163 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCC
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCC
Confidence 122333321 2457999999995 4589999999999999999855444
No 312
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.27 E-value=0.074 Score=45.74 Aligned_cols=231 Identities=11% Similarity=0.084 Sum_probs=124.3
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcc--cCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeC
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDD 163 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~ 163 (368)
..+.+|.|.+++..+++|..+.| |....+......... ......+..+.+.++..++++ . . +.|..- .
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g-~-~-----g~i~~S-~ 105 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVG-E-P-----PIMLHT-T 105 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEE-E-T-----TEEEEE-S
T ss_pred CcEEEEEECCCCcEEEEcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEE-C-C-----CeEEEE-C
Confidence 46999999888888887766654 333333333222211 012446778888875555443 2 2 544432 2
Q ss_pred CCCcEEEEEe----cCCceeEEEEeeCccEEE--eCCcEEEEEcCCCeEEEEE-eccCCCeeEEEEecCCCeEEEEeecC
Q 017642 164 HQSRCIGELS----FRSEVRSVKLRRDRIIVV--LEQKIFVYNFADLKLLHQI-ETIANPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 164 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
..|+.-..+. ..+.+..+.+.+++.+++ .++.|+. ....|+.-..+ ......+..+.+.+++.. +++ +
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~--~~~-g- 180 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEY--VAV-S- 180 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCE--EEE-E-
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcE--EEE-E-
Confidence 3333222222 234577888777777666 3454432 11223322222 233446777888887653 333 3
Q ss_pred CCCeEEE-EecCcceeeee-eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec--cCcccEEEEEEe
Q 017642 237 QKGQVRV-EHYASKRTKFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG--ADRAEIYSLAFS 312 (368)
Q Consensus 237 ~dg~i~i-~~~~~~~~~~~-~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s 312 (368)
.+|.+.. ++..+..-..+ ......+..+.+.+++++++ ++.+|. +++.+...++....+... .....+.++.+.
T Consensus 181 ~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 181 SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGK-IAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTE-EEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCce-EEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 3566655 44322222111 23445788999999987654 556777 777753334444333321 122358899999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCC
Q 017642 313 SNAQWLAVSSDKGTVHVFNLKVN 335 (368)
Q Consensus 313 p~~~~l~s~s~dg~i~iwd~~~~ 335 (368)
+++.+++++. +|.| ++..+.+
T Consensus 259 ~~~~~~~~g~-~g~i-~~S~DgG 279 (327)
T 2xbg_A 259 TPNEVWLAGG-AGAL-LCSQDGG 279 (327)
T ss_dssp SSSCEEEEES-TTCE-EEESSTT
T ss_pred CCCEEEEEeC-CCeE-EEeCCCC
Confidence 8888776654 6666 3444433
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.19 E-value=0.099 Score=45.54 Aligned_cols=230 Identities=10% Similarity=0.030 Sum_probs=119.1
Q ss_pred CCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcc--cCCceeEEEEEEeCC----eEEEEecCC--CCCCCCCc
Q 017642 86 PTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFE--RGGGIGVVEMLFRCN----ILALVGGGP--DPQYPLNK 157 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----~~~~~s~~~--d~~~~~~~ 157 (368)
.....|+|.|+|+++++-.++.|++++. .+. .....+. .........++++++ +.++++... ...-..+.
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4568999999999777665877888863 222 2111111 123345778899886 444443221 00000035
Q ss_pred EEEEeCCCC-------cEE-EEEe--cCCceeEEEEeeCccEEEeC----------------CcEEEEEcCCCeE-----
Q 017642 158 VMIWDDHQS-------RCI-GELS--FRSEVRSVKLRRDRIIVVLE----------------QKIFVYNFADLKL----- 206 (368)
Q Consensus 158 i~vwd~~~~-------~~~-~~~~--~~~~v~~~~~~~~~~~l~~d----------------~~i~vwd~~~~~~----- 206 (368)
|..|+...+ +.+ ..+. .......++|.|||.+.+.. +.|..++.. ++.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCC
Confidence 666765543 111 1122 11234679999999877732 345555543 320
Q ss_pred ---EEEE-eccCCCeeEEEEecCCCeEEEEeecCCCC--eEEEEecCc-----------------ceeeeeeccCcceEE
Q 017642 207 ---LHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKG--QVRVEHYAS-----------------KRTKFIMAHDSRIAC 263 (368)
Q Consensus 207 ---~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~~dg--~i~i~~~~~-----------------~~~~~~~~~~~~i~~ 263 (368)
...+ .++.+ ...++|+++...++++-.+ .++ .|.+-.... ..+..+.........
T Consensus 186 f~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g-~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 186 FPNSPIWSYGHRN-PQGIDWHRASGVMVATEHG-PVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp STTCCEEEECCSC-CCEEEECTTTCCEEEEECC-SSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCcEEEEccCC-cceEEEeCCCCCEEEEecC-CCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 1111 23333 3458899954455555433 222 222211110 111122111235678
Q ss_pred EEEC-------CCCCEEEEEeCCCcEEEEEECCCC-cee--EeeEeccCcccEEEEEEecCCCEEEEEe
Q 017642 264 FALT-------QDGQLLATSSTKGTLVRIFNTLDG-TLL--QEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (368)
Q Consensus 264 v~~s-------p~g~~l~s~~~dg~~i~iwd~~~~-~~~--~~~~~~~~~~~v~~l~~sp~~~~l~s~s 322 (368)
++|. .+|.++++.-..+. |...++... +.. ..+... ....+..+++.|||.++++..
T Consensus 264 ~~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKN-VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTT-TSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccC-CCCCeeEEEECCCCcEEEEEe
Confidence 8883 46766666555566 888887753 332 222211 135789999999998776654
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.13 E-value=0.096 Score=44.27 Aligned_cols=230 Identities=14% Similarity=0.169 Sum_probs=105.4
Q ss_pred CCEEEEEe-C----CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEE
Q 017642 97 HGCFAAGT-D----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGE 171 (368)
Q Consensus 97 g~~l~~~~-d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~ 171 (368)
+.+++.|+ + +.+.+||..+..-.....+. ..... ..+....+.+++++|..+ ...-..+.+||..+.+....
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~ 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELP-SRRCR-AGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSV 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCS-SCCBS-CEEEEETTEEEEESCBCS-SSBCCCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCC-ccccc-ceEEEECCEEEEEeCcCC-CccccceEEECCCCCceeeC
Confidence 44556665 2 23778887655433222221 11111 122333556666655332 11125689999888764433
Q ss_pred Ee--cCCceeEEEEeeCccEEE---eC-----CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCC----
Q 017642 172 LS--FRSEVRSVKLRRDRIIVV---LE-----QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ---- 237 (368)
Q Consensus 172 ~~--~~~~v~~~~~~~~~~~l~---~d-----~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~---- 237 (368)
-. ....-.+++.. ++.+++ .+ ..+.+||+.+.+-...-..........+...+ +.++++ .|..
T Consensus 93 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-~~iyv~-GG~~~~~~ 169 (302)
T 2xn4_A 93 ANMRDRRSTLGAAVL-NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVG-GLLYAV-GGYDVASR 169 (302)
T ss_dssp CCCSSCCBSCEEEEE-TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEET-TEEEEE-CCEETTTT
T ss_pred CCCCccccceEEEEE-CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEEC-CEEEEE-eCCCCCCC
Confidence 22 22122233332 444444 12 35888998776533221111111111111123 344443 2321
Q ss_pred --CCeEEEEecCcceeeee---eccCcceEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCceeEeeEeccCcccEE
Q 017642 238 --KGQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTLLQEVRRGADRAEIY 307 (368)
Q Consensus 238 --dg~i~i~~~~~~~~~~~---~~~~~~i~~v~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~~v~ 307 (368)
...+.+++.....-..+ .........+.+ ++++++.|+.++ . +.+||+.+.+-. .+........-.
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~-~~~~~~~~r~~~ 245 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNAWR-QVADMNMCRRNA 245 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTEEE-EECCCSSCCBSC
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCCEe-eCCCCCCccccC
Confidence 12345555444322222 111112223333 677778877643 5 899998876533 222110111111
Q ss_pred EEEEecCCCEEEEEeCCC-----eEEEEEccCCCC
Q 017642 308 SLAFSSNAQWLAVSSDKG-----TVHVFNLKVNSG 337 (368)
Q Consensus 308 ~l~~sp~~~~l~s~s~dg-----~i~iwd~~~~~~ 337 (368)
+++. -++++++.|+.++ .+.+||+++.+=
T Consensus 246 ~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 246 GVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred eEEE-ECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 2222 3677777777553 489999887653
No 315
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.12 E-value=0.097 Score=44.18 Aligned_cols=228 Identities=11% Similarity=0.078 Sum_probs=106.1
Q ss_pred CCCEEEEEe-C------CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCc-
Q 017642 96 DHGCFAAGT-D------HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSR- 167 (368)
Q Consensus 96 ~g~~l~~~~-d------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~- 167 (368)
++.+++.|+ . +.+.+||..+.+-.....+. ..... ..+....+.++++++..+ ......+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSIT-RKRRY-VASVSLHDRIYVIGGYDG-RSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCS-SCCBS-CEEEEETTEEEEECCBCS-SCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCC-hhhcc-ccEEEECCEEEEEcCCCC-CccCceEEEEECCCCCC
Confidence 445566665 2 23778887654432222221 11111 222334556666655331 1112579999988776
Q ss_pred --EEEEEe--cCCceeEEEEeeCccEEEe--------CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeec
Q 017642 168 --CIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPG 235 (368)
Q Consensus 168 --~~~~~~--~~~~v~~~~~~~~~~~l~~--------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g 235 (368)
....-. ....-.+++.. ++++++. ...+.+||+.+.+-...-..........+...+ +.++++ |
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~-~~iyv~--G 166 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTL-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVAS-GVIYCL--G 166 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEET-TEEEEE--C
T ss_pred CeeEECCCCCCCccceeEEEE-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEEC-CEEEEE--C
Confidence 333222 22222222332 5555552 236899998776533221111111111122223 344443 3
Q ss_pred CCC-----CeEEEEecCcceeeeee---ccCcceEEEEECCCCCEEEEEeCC-----CcEEEEEECCCCceeEeeEeccC
Q 017642 236 LQK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTLLQEVRRGAD 302 (368)
Q Consensus 236 ~~d-----g~i~i~~~~~~~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~~~~~~~~~~ 302 (368)
+.+ ..+.+++.....-..+. ........+.+ ++++++.|+.+ .. +.+||+.+.+-.. +.....
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~ 242 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDSWTT-VTSMTT 242 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEE-ECCCSS
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCcEEE-CCCCCC
Confidence 333 23555554443322221 11112223333 66777777764 35 8999998765432 221101
Q ss_pred -cccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCC
Q 017642 303 -RAEIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (368)
Q Consensus 303 -~~~v~~l~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 336 (368)
......+. -++++++.|+.+ ..|.+||+++.+
T Consensus 243 ~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 243 PRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred cccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11112222 267777777655 357888887653
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.81 E-value=0.54 Score=47.79 Aligned_cols=169 Identities=7% Similarity=0.027 Sum_probs=99.1
Q ss_pred CCCcEEEEeCCCCcEEEEE--ecCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEE
Q 017642 154 PLNKVMIWDDHQSRCIGEL--SFRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 154 ~~~~i~vwd~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 230 (368)
..|.|.+|++..++..... ..++.|++++-- +|++++ .+.+|++|++...+.++.-...-..+..+.+...++.+
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I- 939 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFI- 939 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEE-
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEE-
Confidence 3489999998755433332 367889998755 456666 78999999997655443111111123333444455543
Q ss_pred EEeecCCCCeEEE--EecCcceeeeeec--cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCC-------cee---Ee
Q 017642 231 LVCPGLQKGQVRV--EHYASKRTKFIMA--HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG-------TLL---QE 296 (368)
Q Consensus 231 l~~~g~~dg~i~i--~~~~~~~~~~~~~--~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~-------~~~---~~ 296 (368)
++ |..-..+.+ |......+..+.. +...++++.|-.++ .++.+..+|. |.++..... +.+ ..
T Consensus 940 -~v-gD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gN-l~vl~~~~~~~~~~~~~~L~~~~~ 1015 (1158)
T 3ei3_A 940 -LV-GDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFN-LFVCQKDSAATTDEERQHLQEVGL 1015 (1158)
T ss_dssp -EE-EESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSE-EEEEEECTTCCSTTGGGBEEEEEE
T ss_pred -EE-EEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCc-EEEEecCCCCCCccccceeeeEEE
Confidence 32 333344444 6655555554433 44568888886554 6777899999 998876431 222 22
Q ss_pred eEeccCcccEEEEE---EecC---------CCEEEEEeCCCeEEEEE
Q 017642 297 VRRGADRAEIYSLA---FSSN---------AQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 297 ~~~~~~~~~v~~l~---~sp~---------~~~l~s~s~dg~i~iwd 331 (368)
|.. ...|+++. +.+. ...++.++.+|.|.+.-
T Consensus 1016 fhl---G~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 1016 FHL---GEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp EEC---SSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEE
T ss_pred EeC---CCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEE
Confidence 222 33566665 2222 23467778899887764
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.61 E-value=0.27 Score=42.53 Aligned_cols=159 Identities=12% Similarity=-0.010 Sum_probs=86.9
Q ss_pred cCCceeEEEEeeCccEEE--e-CCcEEEEEcCCCeEEEE--E----eccCCCeeEEEEecC---CCeEEEEeecCCCCeE
Q 017642 174 FRSEVRSVKLRRDRIIVV--L-EQKIFVYNFADLKLLHQ--I----ETIANPKGLCAVSQG---VGSLVLVCPGLQKGQV 241 (368)
Q Consensus 174 ~~~~v~~~~~~~~~~~l~--~-d~~i~vwd~~~~~~~~~--~----~~~~~~v~~~~~~~~---~~~~~l~~~g~~dg~i 241 (368)
.-...+.|+|.|||.+++ . .|.|++++..+++.... + .........++++|+ +..+++.++...++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 445678999999999888 3 68899998765553221 1 122345677999996 4566665543333333
Q ss_pred EEEecCc-----------ceee-eee-ccCcceEEEEECCCCCEEEEEeC-------------CCcEEEEEECCCCc---
Q 017642 242 RVEHYAS-----------KRTK-FIM-AHDSRIACFALTQDGQLLATSST-------------KGTLVRIFNTLDGT--- 292 (368)
Q Consensus 242 ~i~~~~~-----------~~~~-~~~-~~~~~i~~v~~sp~g~~l~s~~~-------------dg~~i~iwd~~~~~--- 292 (368)
.-+.... +.+. .+. .....-..|.|.|||.++++.+. .|. |.-.+.. ++
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~-IlRi~~d-G~ip~ 187 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGK-ILRMTPD-GEPAP 187 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTC-EEEECTT-SSBCT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCE-EEEEeCC-CCccC
Confidence 3233222 1111 121 11223467999999987776542 244 4434432 22
Q ss_pred -----eeEeeEeccCcccEEEEEEecCCCEEEEE-eCCCeEEEEEccCCC
Q 017642 293 -----LLQEVRRGADRAEIYSLAFSSNAQWLAVS-SDKGTVHVFNLKVNS 336 (368)
Q Consensus 293 -----~~~~~~~~~~~~~v~~l~~sp~~~~l~s~-s~dg~i~iwd~~~~~ 336 (368)
....+..+ +. ....++|+|+|.++++= +.|+.=.|-.+..+.
T Consensus 188 ~nPf~~~~i~a~G-~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ 235 (347)
T 3das_A 188 GNPFPGSPVYSYG-HR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGD 235 (347)
T ss_dssp TCSSTTCCEEEBC-CS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTC
T ss_pred CCCCCCCeEEeeC-CC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCC
Confidence 11122222 32 45789999998866554 334434444444443
No 318
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.53 E-value=0.34 Score=41.93 Aligned_cols=74 Identities=12% Similarity=0.161 Sum_probs=36.8
Q ss_pred CCCEEEEEe--CCeEEEEEecCCCcceEE--EcccCCceeEEEEEEeCCeEEEEecC-C--C-CCCCCCcEEEEeCCCCc
Q 017642 96 DHGCFAAGT--DHGFRIYNCDPFREIFRR--DFERGGGIGVVEMLFRCNILALVGGG-P--D-PQYPLNKVMIWDDHQSR 167 (368)
Q Consensus 96 ~g~~l~~~~--d~~i~iw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~-~--d-~~~~~~~i~vwd~~~~~ 167 (368)
++++++.|+ .+.+.+||..+....... .+. .....-.++....+.+++++|. . + ..-....+.+||+.+.+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p-~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFP-GGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCT-TCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCC-CCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 677777777 345888887642222221 121 0111112233335666666554 1 1 00011578999988876
Q ss_pred EEE
Q 017642 168 CIG 170 (368)
Q Consensus 168 ~~~ 170 (368)
...
T Consensus 98 W~~ 100 (357)
T 2uvk_A 98 WVK 100 (357)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 319
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.53 E-value=0.26 Score=42.90 Aligned_cols=142 Identities=11% Similarity=0.001 Sum_probs=77.8
Q ss_pred CCceeEEEEeeCccEEE--eCCcEEEEEcCCCe-EEEEEe---ccCCCeeEEEEecC---CCeEEEEeec-CCC----Ce
Q 017642 175 RSEVRSVKLRRDRIIVV--LEQKIFVYNFADLK-LLHQIE---TIANPKGLCAVSQG---VGSLVLVCPG-LQK----GQ 240 (368)
Q Consensus 175 ~~~v~~~~~~~~~~~l~--~d~~i~vwd~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~~l~~~g-~~d----g~ 240 (368)
-.....|+|.|+|++++ .++.|+++| .+++ .+..+. ........++++|+ +..++++.+. ..+ ..
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 35678999999999877 468999997 4565 222111 12245677999998 6676766532 112 33
Q ss_pred EEEEecCcc--------ee-eeeec-cCcceEEEEECCCCCEEEEEeC-------------CCcEEEEEECCCCc-----
Q 017642 241 VRVEHYASK--------RT-KFIMA-HDSRIACFALTQDGQLLATSST-------------KGTLVRIFNTLDGT----- 292 (368)
Q Consensus 241 i~i~~~~~~--------~~-~~~~~-~~~~i~~v~~sp~g~~l~s~~~-------------dg~~i~iwd~~~~~----- 292 (368)
|..++.... .+ ..+.. .......|+|.|||.++++.+. .|. |.-++.. ++
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~-I~ri~~d-G~~p~~n 184 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGK-ILRVDEE-GRPPADN 184 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSE-EEEECTT-SCCCTTS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeE-EEEEcCC-CCCCCCC
Confidence 433333322 11 11221 1123467999999986666433 134 5555543 32
Q ss_pred ---eeEeeEeccCcccEEEEEEec-CCCEEEEE
Q 017642 293 ---LLQEVRRGADRAEIYSLAFSS-NAQWLAVS 321 (368)
Q Consensus 293 ---~~~~~~~~~~~~~v~~l~~sp-~~~~l~s~ 321 (368)
....+..+ + .....++|+| +|+++++-
T Consensus 185 pf~~~~i~a~G-~-rnp~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 185 PFPNSPIWSYG-H-RNPQGIDWHRASGVMVATE 215 (354)
T ss_dssp SSTTCCEEEEC-C-SCCCEEEECTTTCCEEEEE
T ss_pred CCCCCcEEEEc-c-CCcceEEEeCCCCCEEEEe
Confidence 01122221 2 2356899999 66665543
No 320
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.51 E-value=0.36 Score=41.93 Aligned_cols=241 Identities=8% Similarity=0.023 Sum_probs=121.3
Q ss_pred CCEEEEEEcCCCC-EEEEEeCCeEEEEEecCCCcceEEE---cccCCceeEEEEEEeCC----eEEEEecCCCCCC--CC
Q 017642 86 PTLLHISFNQDHG-CFAAGTDHGFRIYNCDPFREIFRRD---FERGGGIGVVEMLFRCN----ILALVGGGPDPQY--PL 155 (368)
Q Consensus 86 ~~v~~~~~s~~g~-~l~~~~d~~i~iw~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~s~~~d~~~--~~ 155 (368)
.....|+|.|+|+ ++++-..+.|++++.+......... +..........++++++ +.++++......- ..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3568999999999 7666557778888743211000000 10122345678899873 4444432110000 00
Q ss_pred CcEEEEeCCCC--c--EEEE-Ee-c------CCceeEEEEeeCccEEEe--C--------------CcEEEEEcCCCe--
Q 017642 156 NKVMIWDDHQS--R--CIGE-LS-F------RSEVRSVKLRRDRIIVVL--E--------------QKIFVYNFADLK-- 205 (368)
Q Consensus 156 ~~i~vwd~~~~--~--~~~~-~~-~------~~~v~~~~~~~~~~~l~~--d--------------~~i~vwd~~~~~-- 205 (368)
..|..|+...+ + .... +. . ......++|.|||.+.+. | |.|.-+|.. ++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p 176 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIP 176 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCC
Confidence 35666665432 1 1111 11 1 112467999999977762 2 356666654 22
Q ss_pred -----------EEEEEe-ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC-c------------------------
Q 017642 206 -----------LLHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA-S------------------------ 248 (368)
Q Consensus 206 -----------~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~------------------------ 248 (368)
....+. ++. ....++|.+....++++-.| .++.=.|.... +
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g-~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHG-PRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEEC-SBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecC-CCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 111221 222 24568899854555554322 22111221110 0
Q ss_pred -------ceeeeeeccCcceEEEEECC-------CCCEEEEEeCCCcEEEEEECCCCceeEeeEec-cCcccEEEEEEec
Q 017642 249 -------KRTKFIMAHDSRIACFALTQ-------DGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG-ADRAEIYSLAFSS 313 (368)
Q Consensus 249 -------~~~~~~~~~~~~i~~v~~sp-------~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~-~~~~~v~~l~~sp 313 (368)
..+..+ .+...+..++|.. +|+++++.-..+. |...++..++.+.....- .....+..|++.|
T Consensus 255 ~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 255 EIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKD-VIVMSVNGDKVTEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp SSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTE-EEEEEEETTEEEEEEEESGGGCCCEEEEEECT
T ss_pred CCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCE-EEEEEeCCCeEeeeEEcccCCCCceeEEEECC
Confidence 000111 1223466777753 4666666555666 888887765443322110 1134789999999
Q ss_pred CCCEEEEEe-CCCeEEEEEcc
Q 017642 314 NAQWLAVSS-DKGTVHVFNLK 333 (368)
Q Consensus 314 ~~~~l~s~s-~dg~i~iwd~~ 333 (368)
||.++++.. .+| +||.+.
T Consensus 333 dG~lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 333 DGYLYVLTDESSG--ELLKVS 351 (353)
T ss_dssp TSCEEEEECSTTE--EEEEEE
T ss_pred CCcEEEEEeCCCC--EEEEEe
Confidence 999766543 344 556553
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.46 E-value=0.34 Score=41.03 Aligned_cols=229 Identities=13% Similarity=0.062 Sum_probs=105.8
Q ss_pred CCCCEEEEEe-C----CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCC---CCCCCCCcEEEEeCCCC
Q 017642 95 QDHGCFAAGT-D----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQYPLNKVMIWDDHQS 166 (368)
Q Consensus 95 ~~g~~l~~~~-d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~~~~~~i~vwd~~~~ 166 (368)
-++.+++.|+ + +.+.+||..+.+-.....+. ..... ..+....+.+++++|.. +.......+.+||+.+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQ-VPRSG-LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCS-SCCBS-CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCC-ccccc-ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 3566666666 2 23788887654433222221 11111 12233355666665531 10001146889998877
Q ss_pred cEEEEEe--cCCceeEEEEeeCccEEEe--------CCcEEEEEcCCCeEEEE--EeccCCCeeEEEEecCCCeEEEEee
Q 017642 167 RCIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLKLLHQ--IETIANPKGLCAVSQGVGSLVLVCP 234 (368)
Q Consensus 167 ~~~~~~~--~~~~v~~~~~~~~~~~l~~--------d~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~~~ 234 (368)
+....-. ....-.+++.. ++++++. -..+.+||+.+.+-... +.........+.+ ++.++++
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~-- 174 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL---NRLLYAV-- 174 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEE--
T ss_pred eEeECCCCCcCccccEEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE---CCEEEEE--
Confidence 5433221 11111222222 5555542 24688999877653221 1111111122222 3344443
Q ss_pred cCCC-----CeEEEEecCcceeeee---eccCcceEEEEECCCCCEEEEEeCC-----CcEEEEEECCCCceeEeeEecc
Q 017642 235 GLQK-----GQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTLLQEVRRGA 301 (368)
Q Consensus 235 g~~d-----g~i~i~~~~~~~~~~~---~~~~~~i~~v~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~~~~~~~~~ 301 (368)
|+.+ ..+.+++.....-..+ .........+.+ ++++++.|+.+ .. +.+||+.+.+-.. +....
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p 250 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETETWTF-VAPMK 250 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEE-CCCCS
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCcEEE-CCCCC
Confidence 3333 2355555444332222 111112233333 67777777654 45 8999988765332 21110
Q ss_pred CcccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCC
Q 017642 302 DRAEIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (368)
Q Consensus 302 ~~~~v~~l~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 336 (368)
....-.+++. -++++++.|+.+ ..+.+||+++.+
T Consensus 251 ~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 251 HRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1111112222 267777777643 457888887654
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.34 E-value=0.4 Score=40.58 Aligned_cols=175 Identities=9% Similarity=0.004 Sum_probs=96.3
Q ss_pred EEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE---e-C-------------CcEEE
Q 017642 136 LFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV---L-E-------------QKIFV 198 (368)
Q Consensus 136 ~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---~-d-------------~~i~v 198 (368)
++..+.+++.....+ +.|...+..... ...+.. . .+--+++++.++. . + ..|+.
T Consensus 22 ~~~g~~iy~~n~~d~-----~~ly~~~~dg~~-~~~l~~-~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~ 92 (302)
T 3s25_A 22 CESDGEVFFSNTNDN-----GRLYAMNIDGSN-IHKLSN-D--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCR 92 (302)
T ss_dssp EEETTEEEEEEGGGT-----TEEEEEETTSCS-CEEEEE-E--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEE
T ss_pred EEeCCEEEEEeCCCC-----ceEEEEcCCCCC-CEEccC-C--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEE
Confidence 355666666655433 677777754333 333321 1 1234577777776 1 2 35777
Q ss_pred EEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEe-ecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEe
Q 017642 199 YNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVC-PGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSS 277 (368)
Q Consensus 199 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~ 277 (368)
.++..++.. .+.. . ....++++++.++++- +...+..|+.-+.++.....+..+.. ..++++++.|+-.+
T Consensus 93 i~~dg~~~~-~l~~--~--~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 93 IKRNGHGST-VLDP--D--PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp EETTSCCCE-EEEC--S--CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEEC
T ss_pred EeCCCCcce-Eeec--C--CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEe
Confidence 777655432 2321 1 1236788898866653 11234555555556655555555433 34677888777666
Q ss_pred C-CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCC--CeEEEEEccCC
Q 017642 278 T-KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDK--GTVHVFNLKVN 335 (368)
Q Consensus 278 ~-dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~d--g~i~iwd~~~~ 335 (368)
. ... |.+.++..+... .+.. . ... ..++|++.+|+-...+ ..|..-++...
T Consensus 164 ~g~~~-Iy~~~l~g~~~~-~l~~--~--~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 164 PKNGQ-LYRYDTASQSEA-LFYD--C--NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp TTTCC-EEEEETTTTEEE-EEEC--S--CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred CCCce-EEEEECCCCCEE-EEeC--C--Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 5 456 888887665544 3322 1 122 2356899888766543 24555555443
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.29 E-value=0.48 Score=40.96 Aligned_cols=229 Identities=9% Similarity=0.005 Sum_probs=119.5
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEcc---cCCceeEEEEEEeCC----eEEEEe--cCCCC
Q 017642 82 SSPPPTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDFE---RGGGIGVVEMLFRCN----ILALVG--GGPDP 151 (368)
Q Consensus 82 ~~h~~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~s--~~~d~ 151 (368)
...-...+.|+|.|||+++++-. .+.|++++.+.+.......+. .........++++++ +.++++ ...+
T Consensus 28 a~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~- 106 (347)
T 3das_A 28 ATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD- 106 (347)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS-
T ss_pred ecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC-
Confidence 33445678999999999888877 666888875433332222221 134556788999874 333332 1222
Q ss_pred CCCCCcEEEEeCCCC----------cEEE-EEe--cCCceeEEEEeeCccEEEe----------------CCcEEEEEcC
Q 017642 152 QYPLNKVMIWDDHQS----------RCIG-ELS--FRSEVRSVKLRRDRIIVVL----------------EQKIFVYNFA 202 (368)
Q Consensus 152 ~~~~~~i~vwd~~~~----------~~~~-~~~--~~~~v~~~~~~~~~~~l~~----------------d~~i~vwd~~ 202 (368)
+.|.-|....+ +.+. .+. .......|.|.|||.+.+. .|.|.-++..
T Consensus 107 ----~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 107 ----NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp ----EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred ----CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 56666655431 1221 122 1223467999999987762 1455555543
Q ss_pred CCe--------EEEEE-eccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEe-cCcc------------------eeeee
Q 017642 203 DLK--------LLHQI-ETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEH-YASK------------------RTKFI 254 (368)
Q Consensus 203 ~~~--------~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~-~~~~------------------~~~~~ 254 (368)
++ ....+ .++.++ ..++|.+++. ++++-.| .++.-.|.. ..+. .+..+
T Consensus 183 -G~ip~~nPf~~~~i~a~G~RNp-~Gla~dp~G~-L~~~d~g-~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~ 258 (347)
T 3das_A 183 -GEPAPGNPFPGSPVYSYGHRNV-QGLAWDDKQR-LFASEFG-QDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQW 258 (347)
T ss_dssp -SSBCTTCSSTTCCEEEBCCSBC-CEEEECTTCC-EEEEECC-SSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEE
T ss_pred -CCccCCCCCCCCeEEeeCCCCc-ceEEECCCCC-EEEEecC-CCCCceeeEEcCCCEecCCcccCCCCCccccCCcEec
Confidence 22 01112 234333 4588999765 3433222 333233311 1110 11112
Q ss_pred eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCcee---EeeEeccCcccEEEEEEecCCCEEEEEe
Q 017642 255 MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLL---QEVRRGADRAEIYSLAFSSNAQWLAVSS 322 (368)
Q Consensus 255 ~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~---~~~~~~~~~~~v~~l~~sp~~~~l~s~s 322 (368)
..+......|+|. +|.+++..-..+. |....+.....+ ..+... ..+.+.+|+..|||.++++..
T Consensus 259 ~~~~~ap~G~~~~-~g~~~~~~l~~~~-l~~v~~~~~~~~~~~e~~l~~-~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 259 STDEASPSGIAYA-EGSVWMAGLRGER-LWRIPLKGTAAAADPQAFLEG-EYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp CTTTCCEEEEEEE-TTEEEEEESTTCS-EEEEEEETTEESSCCEEESTT-TSSCEEEEEEEETTEEEEEEC
T ss_pred CCCCCCCcceEEE-cCceeeccccCCE-EEEEEecCCceecceEEeecC-CCCCccEEEECCCCcEEEEEc
Confidence 2222345677776 4555555555555 666666544321 122211 236799999999998776654
No 324
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.29 E-value=0.42 Score=40.32 Aligned_cols=227 Identities=10% Similarity=0.062 Sum_probs=106.4
Q ss_pred CCEEEEEe---CCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe
Q 017642 97 HGCFAAGT---DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (368)
Q Consensus 97 g~~l~~~~---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~ 173 (368)
+.+++.|+ .+.+.+||..+.+-.....+. ..... ..+....+.+++++|.. ......+.+||..+++....-.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPF-EKRRD-AACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCS-CCCBS-CEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCC-cccce-eEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCC
Confidence 33555665 234888887665433222221 11111 12223355566665532 1122679999998876543322
Q ss_pred --cCCceeEEEEeeCccEEE---eC------CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCC-----
Q 017642 174 --FRSEVRSVKLRRDRIIVV---LE------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ----- 237 (368)
Q Consensus 174 --~~~~v~~~~~~~~~~~l~---~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~----- 237 (368)
....-.+++.. ++++++ .+ ..+.+||..+.+-...-..........+...++ .++++ .|..
T Consensus 88 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv~-GG~~~~~~~ 164 (306)
T 3ii7_A 88 PPTPRDSLAACAA-EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANG-LIYVC-GGSLGNNVS 164 (306)
T ss_dssp CSSCCBSCEEEEE-TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT-EEEEE-CCEESCTTT
T ss_pred CCccccceeEEEE-CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECC-EEEEE-CCCCCCCCc
Confidence 22222222222 555544 22 458999998765332211111111111122233 44443 2321
Q ss_pred ---CCeEEEEecCcceeeeeec---cCcceEEEEECCCCCEEEEEeCC-----CcEEEEEECCCCceeEeeEecc-Cccc
Q 017642 238 ---KGQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGTLLQEVRRGA-DRAE 305 (368)
Q Consensus 238 ---dg~i~i~~~~~~~~~~~~~---~~~~i~~v~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~~~~~~~~~~-~~~~ 305 (368)
-..+.+++.....-..+.. ....-..+.+ ++++++.|+.+ .. +.+||+.+.+-.. +.... ....
T Consensus 165 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~W~~-~~~~p~~r~~ 240 (306)
T 3ii7_A 165 GRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDN-VEYYDIKLNEWKM-VSPMPWKGVT 240 (306)
T ss_dssp CEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCC-EEEEETTTTEEEE-CCCCSCCBSC
T ss_pred ccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCce-EEEeeCCCCcEEE-CCCCCCCccc
Confidence 2334555554433222221 1112222333 66777777653 34 8999988764332 21110 1112
Q ss_pred EEEEEEecCCCEEEEEeCC-----CeEEEEEccCCC
Q 017642 306 IYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (368)
Q Consensus 306 v~~l~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 336 (368)
...+.+ ++++++.|+.+ ..+.+||+++.+
T Consensus 241 ~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 241 VKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp CEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 222222 67788888744 568889987754
No 325
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.29 E-value=0.056 Score=46.58 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=59.1
Q ss_pred EEEEEe-CCeEEEEEecCCCcceEEEcccCCceeEEEEEE---eCC-eEEEEecCCCCCCCCCcEEEEeCCCCcEEEEEe
Q 017642 99 CFAAGT-DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLF---RCN-ILALVGGGPDPQYPLNKVMIWDDHQSRCIGELS 173 (368)
Q Consensus 99 ~l~~~~-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~~ 173 (368)
++++++ |+.|.-+|.++++........ .....+.... ..+ ..+++....| |.|..++..+|.....+.
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~d-----G~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGD-----GNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTT-----TEEEEEETTTEEEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCC-----CEEEEEECCCCcEEeeec
Confidence 344444 666777776666555443321 0011111100 012 3333332344 999999999886665554
Q ss_pred cCCcee--EEEE------------eeCccEEE--eCCcEEEEEcCCCeEEEEEec
Q 017642 174 FRSEVR--SVKL------------RRDRIIVV--LEQKIFVYNFADLKLLHQIET 212 (368)
Q Consensus 174 ~~~~v~--~~~~------------~~~~~~l~--~d~~i~vwd~~~~~~~~~~~~ 212 (368)
-...+. -+.. +.++.+++ .++.+...|+++|+.+..+..
T Consensus 85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 222111 1111 24566665 689999999999999998864
No 326
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.25 E-value=1.2 Score=45.23 Aligned_cols=171 Identities=12% Similarity=0.145 Sum_probs=101.0
Q ss_pred CcEEEEeCCCCcEEEEEe--cCCceeEEEEe---eC-ccEEE-------------eCCcEEEEEcCCCeEEEEE-eccCC
Q 017642 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLR---RD-RIIVV-------------LEQKIFVYNFADLKLLHQI-ETIAN 215 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~---~~-~~~l~-------------~d~~i~vwd~~~~~~~~~~-~~~~~ 215 (368)
+.|++.|..+.+.+..+. ....+.+++.- .+ ..+++ ..|.|++|++..++..... ....+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 468899988888877776 45556666532 22 23444 1368999999755432222 12355
Q ss_pred CeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeec-cCcceEEEEECCCCCEEEEEeCCCcEEEEEECCC-Cce
Q 017642 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMA-HDSRIACFALTQDGQLLATSSTKGTLVRIFNTLD-GTL 293 (368)
Q Consensus 216 ~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~-~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~-~~~ 293 (368)
++.+++-- +| + +++. ....+++|+...+....... +-..|..+.....+.+++.|..-.. |.++..+. ...
T Consensus 887 ~v~al~~~-~g-~-Lla~---ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~S-v~~~~y~~~~~~ 959 (1158)
T 3ei3_A 887 AVYSMVEF-NG-K-LLAS---INSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRS-VLLLAYKPMEGN 959 (1158)
T ss_dssp CEEEEEEE-TT-E-EEEE---ETTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBC-EEEEEEETTTTE
T ss_pred cCEEEeee-CC-E-EEEE---cCCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhhe-EEEEEEEcCCCe
Confidence 66665432 33 4 3333 24789997766542211211 1111332233335778888888777 76654332 233
Q ss_pred eEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccC
Q 017642 294 LQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 294 ~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~ 334 (368)
+..+........++++.|-.++ .++.+..+|.|.+.....
T Consensus 960 L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 960 FEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 4455554456689999987654 667788999999999876
No 327
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.21 E-value=0.54 Score=40.78 Aligned_cols=190 Identities=14% Similarity=0.111 Sum_probs=100.5
Q ss_pred eEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcE--EEEEe----cCCceeEEEEeeC----ccEEE--e-C----
Q 017642 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRC--IGELS----FRSEVRSVKLRRD----RIIVV--L-E---- 193 (368)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~--~~~~~----~~~~v~~~~~~~~----~~~l~--~-d---- 193 (368)
.-..+++.+++.++++... +.|++++ +++. +..+. .......++++|+ +.+.+ . .
T Consensus 32 ~P~~ia~~pdG~l~V~e~~------g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERP------GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CEEEEEECTTSCEEEEETT------TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CceEEEEcCCCeEEEEeCC------CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3567888888877666543 8899998 4432 22221 2457889999998 44444 2 2
Q ss_pred -CcEEEEEcCCCe-----EE-EEEe---ccCCCeeEEEEecCCCeEEEEeecCC------------CCeEEEEecCcc--
Q 017642 194 -QKIFVYNFADLK-----LL-HQIE---TIANPKGLCAVSQGVGSLVLVCPGLQ------------KGQVRVEHYASK-- 249 (368)
Q Consensus 194 -~~i~vwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~~~l~~~g~~------------dg~i~i~~~~~~-- 249 (368)
+.|..|+...++ .+ ..+. ........++|.++| .++++. |.. .|.|.-.+.++.
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~-G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTT-GEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEEC-CCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEE-CCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 678888876432 11 1122 111223579999999 455553 421 134433333331
Q ss_pred -----------eeeee-eccCcceEEEEECC-CCCEEEEEeCCCcEE------EEEECCCCc------------------
Q 017642 250 -----------RTKFI-MAHDSRIACFALTQ-DGQLLATSSTKGTLV------RIFNTLDGT------------------ 292 (368)
Q Consensus 250 -----------~~~~~-~~~~~~i~~v~~sp-~g~~l~s~~~dg~~i------~iwd~~~~~------------------ 292 (368)
....+ .++. ....++|+| +|+++++-...+. + .|.-+..+.
T Consensus 182 ~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~-~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSG-EQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp TTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC-------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred CCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCC-CCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence 11111 2232 356789999 6665544332221 1 233222222
Q ss_pred eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 293 LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 293 ~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
++..+. +......++| .+|.++++.-..+.|...+++...
T Consensus 260 p~~~~~---~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~ 299 (352)
T 2ism_A 260 PLYFWP---QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGER 299 (352)
T ss_dssp CSEECT---TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEET
T ss_pred CeEecC---CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCC
Confidence 111221 1234567777 567766666566778877776543
No 328
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.92 E-value=1.3 Score=42.74 Aligned_cols=222 Identities=14% Similarity=0.101 Sum_probs=126.3
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCC
Q 017642 85 PPTLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDH 164 (368)
Q Consensus 85 ~~~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~ 164 (368)
...|.++.-..+| .|.+|+++++..||..+..-. .... .....+..+....+.+++.+. +.|..+|..
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~Gl~~yd~~~~~f~--~~~~-~~~~~i~~i~~~~g~lWigt~--------~Gl~~~~~~ 129 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNGILVYNYRADRYE--QPET-DFPTDVRTMALQGDTLWLGAL--------NGLYTYQLQ 129 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTEEEEEETTTTEEC--CCSC-CCCSCEEEEEEETTEEEEEET--------TEEEEEETT
T ss_pred CceEEEEEEcCCC-cEEEEeCCCeEEEeCCCCEEE--Cccc-CCCceEEEEEecCCcEEEEcC--------CcceeEeCC
Confidence 3468888777766 455667778999997653221 1110 112234555545555555543 458889977
Q ss_pred CCcEEEEEe------cCCceeEEEEeeCccEEE-eCCcEEEEEcCCCeEEEEEecc------CCCeeEEEEecCCCeEEE
Q 017642 165 QSRCIGELS------FRSEVRSVKLRRDRIIVV-LEQKIFVYNFADLKLLHQIETI------ANPKGLCAVSQGVGSLVL 231 (368)
Q Consensus 165 ~~~~~~~~~------~~~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~l 231 (368)
+++.. .+. ....|.++....++.+.+ .++.|..+|..+++... +... ...|.++....++..+++
T Consensus 130 ~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWi 207 (758)
T 3ott_A 130 SRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWI 207 (758)
T ss_dssp TCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEE
T ss_pred CCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEE
Confidence 66543 331 234688888887777766 66678889987765432 2111 123566666666665565
Q ss_pred EeecCCCCeEEEEecCcceeeeee-ccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEec------cCcc
Q 017642 232 VCPGLQKGQVRVEHYASKRTKFIM-AHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG------ADRA 304 (368)
Q Consensus 232 ~~~g~~dg~i~i~~~~~~~~~~~~-~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~------~~~~ 304 (368)
.+ ..| +..++........+. .....|.++....+|.+.+ |+.+ . |.+++..+++.. .+... -...
T Consensus 208 gt---~~G-l~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-G-l~~~~~~~~~~~-~~~~~~~~~~~l~~~ 279 (758)
T 3ott_A 208 GT---EGY-LFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-G-LYVYHNDTTPLQ-HIIHDSRNIQSLTNN 279 (758)
T ss_dssp EE---EEE-EEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-E-EEEECCTTSCCE-EECCCTTCTTSCSCS
T ss_pred EE---CCC-CeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-c-eeEEecCCCcEE-EEEcCCCCcCcCCcC
Confidence 43 234 444444333332222 1234588888888887554 4444 5 889987765533 22210 0123
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEE
Q 017642 305 EIYSLAFSSNAQWLAVSSDKGTVHVF 330 (368)
Q Consensus 305 ~v~~l~~sp~~~~l~s~s~dg~i~iw 330 (368)
.|.++....+|.+.+ |+..| +.++
T Consensus 280 ~i~~i~~D~~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 280 IIWNIFADQEHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp CEEEEEECTTCCEEE-EESSS-EEEE
T ss_pred eEEEEEEcCCCCEEE-EeCCc-cccc
Confidence 588888887777554 44456 4433
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.85 E-value=0.71 Score=39.08 Aligned_cols=228 Identities=12% Similarity=0.061 Sum_probs=102.5
Q ss_pred EEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecC-----CCCCCCCCcEEEEeCCCCcEEEEEe-
Q 017642 100 FAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGG-----PDPQYPLNKVMIWDDHQSRCIGELS- 173 (368)
Q Consensus 100 l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-----~d~~~~~~~i~vwd~~~~~~~~~~~- 173 (368)
++.|+ +.+.+||..+.+-.. ..+.........++....+.+++++|. .........+.+||..+++....-.
T Consensus 8 ~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC-CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 34444 568889877655432 222111122233344445666666662 1000001237889988876432211
Q ss_pred -cCCceeEEEEeeCccEEEeC-----------CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCC---
Q 017642 174 -FRSEVRSVKLRRDRIIVVLE-----------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK--- 238 (368)
Q Consensus 174 -~~~~v~~~~~~~~~~~l~~d-----------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~d--- 238 (368)
....-.+++.. ++++++.. ..+.+||..+.+-...-..........+...++ .+++ ..|..+
T Consensus 86 p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~-~iyv-~GG~~~~~~ 162 (315)
T 4asc_A 86 PSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMD-LVYV-IGGKGSDRK 162 (315)
T ss_dssp SSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT-EEEE-ECCBCTTSC
T ss_pred CcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECC-EEEE-EeCCCCCCc
Confidence 11111222232 44444411 358999998764322111111111112222333 4443 324312
Q ss_pred --CeEEEEecCcceeeeee---ccCcceEEEEECCCCCEEEEEeCCCc----EEEEEECCCCceeEeeEeccCcccEEEE
Q 017642 239 --GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKGT----LVRIFNTLDGTLLQEVRRGADRAEIYSL 309 (368)
Q Consensus 239 --g~i~i~~~~~~~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg~----~i~iwd~~~~~~~~~~~~~~~~~~v~~l 309 (368)
..+.+++.....-..+. .......++.+ ++++++.|+.++. .+.+||+.+.+-.. +........-.++
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~ 239 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP-FEAFPQERSSLSL 239 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEE-ECCCSSCCBSCEE
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEE-CCCCCCcccceeE
Confidence 23555554443222221 11112223333 6777777776541 28889987764332 2211011111122
Q ss_pred EEecCCCEEEEEeCC--------------CeEEEEEccCCC
Q 017642 310 AFSSNAQWLAVSSDK--------------GTVHVFNLKVNS 336 (368)
Q Consensus 310 ~~sp~~~~l~s~s~d--------------g~i~iwd~~~~~ 336 (368)
+. -++++++.|+.+ ..|.+||+++.+
T Consensus 240 ~~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 240 VS-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EE-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EE-ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 22 256777777653 247788887764
No 330
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.74 E-value=1.1 Score=40.39 Aligned_cols=106 Identities=11% Similarity=0.048 Sum_probs=58.0
Q ss_pred CCEEEEEEcCCCCEEEEEeCC-eEEEEEecCCCcceEEEccc-----CCceeEEEEEEeC----CeEEEEecCC------
Q 017642 86 PTLLHISFNQDHGCFAAGTDH-GFRIYNCDPFREIFRRDFER-----GGGIGVVEMLFRC----NILALVGGGP------ 149 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~d~-~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~s~~~------ 149 (368)
...+.|+|.|+|+++++-..+ .|++++...+.......+.. ......+.+++++ ++.++++...
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 356799999999988876665 47777644333322222321 1345677899997 4444444321
Q ss_pred CCC-CCCCcEEEEeCCCC--c-----EEEE-Ee--cCCceeEEEEeeCccEEE
Q 017642 150 DPQ-YPLNKVMIWDDHQS--R-----CIGE-LS--FRSEVRSVKLRRDRIIVV 191 (368)
Q Consensus 150 d~~-~~~~~i~vwd~~~~--~-----~~~~-~~--~~~~v~~~~~~~~~~~l~ 191 (368)
+.. -....|.-|+...+ + .+.. +. .......|+|.+||.+.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv 159 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY 159 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence 000 00034555554322 1 1111 22 123478899999998777
No 331
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.53 E-value=0.48 Score=41.15 Aligned_cols=140 Identities=7% Similarity=0.021 Sum_probs=75.2
Q ss_pred CceeEEEEeeCcc-EEE--eCCcEEEEEcCCCeEEEEEe-------ccCCCeeEEEEecC---CCeEEEEeecC-CC---
Q 017642 176 SEVRSVKLRRDRI-IVV--LEQKIFVYNFADLKLLHQIE-------TIANPKGLCAVSQG---VGSLVLVCPGL-QK--- 238 (368)
Q Consensus 176 ~~v~~~~~~~~~~-~l~--~d~~i~vwd~~~~~~~~~~~-------~~~~~v~~~~~~~~---~~~~~l~~~g~-~d--- 238 (368)
...+.|+|.|+|+ +++ ..|.|++++. +++....+. ........++++|+ +..+++..+.. .+
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 4568999999998 777 4789999985 444321111 12234567899997 66667664321 11
Q ss_pred -CeEEEEecCcc-----eeee----ee---ccCcceEEEEECCCCCEEEEEeC-------------CCcEEEEEECCCCc
Q 017642 239 -GQVRVEHYASK-----RTKF----IM---AHDSRIACFALTQDGQLLATSST-------------KGTLVRIFNTLDGT 292 (368)
Q Consensus 239 -g~i~i~~~~~~-----~~~~----~~---~~~~~i~~v~~sp~g~~l~s~~~-------------dg~~i~iwd~~~~~ 292 (368)
..|..+..+.. .... +. ........|+|.|||.++++.+. .|. |.-+|.. ++
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~-I~ri~~d-G~ 174 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGK-LVRLTDQ-GE 174 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTE-EEEEETT-SC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeE-EEEECCC-CC
Confidence 12332332211 1111 11 11112357999999975555433 245 5556653 22
Q ss_pred -------------eeEeeEeccCcccEEEEEEec-CCCEEEE
Q 017642 293 -------------LLQEVRRGADRAEIYSLAFSS-NAQWLAV 320 (368)
Q Consensus 293 -------------~~~~~~~~~~~~~v~~l~~sp-~~~~l~s 320 (368)
....+..+ + .....++|.| +|+++++
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G-~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYG-I-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEEC-C-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEEc-C-cCccceEEECCCCCEEEE
Confidence 11122221 2 2478999999 5655544
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.48 E-value=0.38 Score=38.40 Aligned_cols=149 Identities=13% Similarity=-0.025 Sum_probs=82.8
Q ss_pred CceeEEEEeeCccEEE-eCCcEEEEEcCCCeE------EEEEe-ccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecC
Q 017642 176 SEVRSVKLRRDRIIVV-LEQKIFVYNFADLKL------LHQIE-TIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYA 247 (368)
Q Consensus 176 ~~v~~~~~~~~~~~l~-~d~~i~vwd~~~~~~------~~~~~-~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~ 247 (368)
..+..++|+|+|.+.+ .+|.++-.+..+.+. -..+- ..-.....+.|.++|.. .+. .||.|+-++..
T Consensus 41 ~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~L--Yav---~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYL--YAV---SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCE--EEE---ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCE--EEe---CCCEEEEeCCC
Confidence 4678999999998777 788877777644211 11221 01112467888888862 332 46888664432
Q ss_pred c-cee------eee-eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCce-----eEeeEeccCcccEEEEEEecC
Q 017642 248 S-KRT------KFI-MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTL-----LQEVRRGADRAEIYSLAFSSN 314 (368)
Q Consensus 248 ~-~~~------~~~-~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~-----~~~~~~~~~~~~v~~l~~sp~ 314 (368)
. ..- ..+ ..--..+..|.|.|+|.+.+.. |+. ++-+...++.. .........-..-.-+.|.++
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~-lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ-FYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE-EEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc-EEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 1 110 011 1112468999999999876666 776 54443322210 011111112224455779999
Q ss_pred CCEEEEEeCCCeEEEEEccCCC
Q 017642 315 AQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 315 ~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
|.+.++. ++ ++|....++
T Consensus 193 G~l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 193 GTLFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp SCEEEEE--TT--EEEEESCCC
T ss_pred CcEEEEe--CC--eEEecCCcc
Confidence 9887766 67 566654443
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.23 E-value=0.55 Score=42.99 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=67.6
Q ss_pred CEEEEEEcCCCCEEEEEe--CCeEEEEEecCCCc-----------ceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCC
Q 017642 87 TLLHISFNQDHGCFAAGT--DHGFRIYNCDPFRE-----------IFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQY 153 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~--d~~i~iw~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~ 153 (368)
....+.++|||+++++++ +..+.|++++.... ...... .-...-+...|++++.++.+.--|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~--e~GlGPlHt~Fd~~G~aYTtlfid--- 398 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP--ELGLGPLHTTFDGRGNAYTTLFID--- 398 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC--BCCSCEEEEEECSSSEEEEEETTT---
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec--cCCCcccEEEECCCCceEeeeeec---
Confidence 345678899999998888 77799999874221 122222 244567788999999888887666
Q ss_pred CCCcEEEEeCCCC----------cEEEEEecCCceeEEEE------eeCccEEE
Q 017642 154 PLNKVMIWDDHQS----------RCIGELSFRSEVRSVKL------RRDRIIVV 191 (368)
Q Consensus 154 ~~~~i~vwd~~~~----------~~~~~~~~~~~v~~~~~------~~~~~~l~ 191 (368)
.+|.-|++... ..+..+.....+-.+.. .++|++++
T Consensus 399 --SqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv 450 (638)
T 3sbq_A 399 --SQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLV 450 (638)
T ss_dssp --TEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEE
T ss_pred --ceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEE
Confidence 89999998653 45556653344444433 46788887
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.19 E-value=1.7 Score=39.13 Aligned_cols=103 Identities=13% Similarity=-0.034 Sum_probs=58.9
Q ss_pred CCceeEEEEeeCccEEEe--C-CcEEEEEcCCCeEEE--EEec------cCCCeeEEEEecC---CCeEEEEeecC----
Q 017642 175 RSEVRSVKLRRDRIIVVL--E-QKIFVYNFADLKLLH--QIET------IANPKGLCAVSQG---VGSLVLVCPGL---- 236 (368)
Q Consensus 175 ~~~v~~~~~~~~~~~l~~--d-~~i~vwd~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~~~l~~~g~---- 236 (368)
-...+.|+|.|+|++++. . +.|++++..+++... .+.. .......++|+|+ +..+++..+..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 346789999999998882 3 368888865554322 2211 1334557999997 77777766420
Q ss_pred -------CCCeEEE-EecCc------ceeee-ee-ccCcceEEEEECCCCCEEEEEe
Q 017642 237 -------QKGQVRV-EHYAS------KRTKF-IM-AHDSRIACFALTQDGQLLATSS 277 (368)
Q Consensus 237 -------~dg~i~i-~~~~~------~~~~~-~~-~~~~~i~~v~~sp~g~~l~s~~ 277 (368)
.....++ ++... +.+.. +. ........|+|.|||+++++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 0122223 22111 11111 21 1123468999999999666544
No 335
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.77 E-value=4.1 Score=37.47 Aligned_cols=218 Identities=10% Similarity=-0.022 Sum_probs=116.7
Q ss_pred CCCCEEEEEe--CCeEEEEEecCCCcceEEEcccCCceeEEEEEEe--CCeEEEEecCCCCC--CCC------------C
Q 017642 95 QDHGCFAAGT--DHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFR--CNILALVGGGPDPQ--YPL------------N 156 (368)
Q Consensus 95 ~~g~~l~~~~--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~d~~--~~~------------~ 156 (368)
-||++|..-. ...|...+++..+......+. ....+..+.+. |+..+++.+++... -.| +
T Consensus 140 yDGrylfiNdkan~RvAri~l~~~~~d~Ii~iP--n~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~ 217 (638)
T 3sbq_A 140 YDGKYLFINDKANSRVARIRLDIMKCDKMITVP--NVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYT 217 (638)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECT--TCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEE
T ss_pred eeeEEEEEecCCCcceEEEECCcEeeceeEeCC--CCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhce
Confidence 4788998888 333878888887776555553 33444455553 44444443333210 001 1
Q ss_pred cEEEEeCCCCcEEEEEecCCceeEEEEeeCccEEE------------------------------------------eCC
Q 017642 157 KVMIWDDHQSRCIGELSFRSEVRSVKLRRDRIIVV------------------------------------------LEQ 194 (368)
Q Consensus 157 ~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~------------------------------------------~d~ 194 (368)
.....|..+.+....+...+....+...+++.+.+ .+|
T Consensus 218 ~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 218 MYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 12223444444444433333343444444554443 011
Q ss_pred -cEEEEEcCC----C-eEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCc-------ce-------eeee
Q 017642 195 -KIFVYNFAD----L-KLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYAS-------KR-------TKFI 254 (368)
Q Consensus 195 -~i~vwd~~~----~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-------~~-------~~~~ 254 (368)
.+.+.|.+. + ..+..+.....+ ..+.++|||+++++ +|-.+.++.+.+... +. ....
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~pksP-HGv~vsPDGkyi~v--~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~ 374 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVPKNP-HGCNTSSDGKYFIA--AGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP 374 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEESSSC-CCEEECTTSCEEEE--ECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC
T ss_pred CCeeEEccccccccCCceEEEEeCCCCC-cceeeCCCCCEEEE--cCCCCCeEEEEEeehhhhhhhccccCcccceEeec
Confidence 355555544 2 122333333333 34789999997443 477788998865542 11 1112
Q ss_pred eccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCC----------ceeEeeEeccCcccEEEEEE------ecCCCEE
Q 017642 255 MAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDG----------TLLQEVRRGADRAEIYSLAF------SSNAQWL 318 (368)
Q Consensus 255 ~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~----------~~~~~~~~~~~~~~v~~l~~------sp~~~~l 318 (368)
+ -.-.....+|.++|....+.-.|.. |..|++... ..+..+..+. .+-.+.- .+||++|
T Consensus 375 e-~GlGPlHt~Fd~~G~aYTtlfidSq-vvkWni~~a~~~~~g~~~~~v~~k~dv~Y---qpGH~~~~~get~~~dGk~l 449 (638)
T 3sbq_A 375 E-LGLGPLHTTFDGRGNAYTTLFIDSQ-VVKWNMEEAVRAYKGEKVNYIKQKLDVHY---QPGHLHASLCETNEADGKWL 449 (638)
T ss_dssp B-CCSCEEEEEECSSSEEEEEETTTTE-EEEEEHHHHHHHHTTCCCCCEEEEEECSS---CEEEEEETTTTSTTCCSCEE
T ss_pred c-CCCcccEEEECCCCceEeeeeecce-EEEEeccHHHHHhcCccCCeeeecccccc---CCcccccCCCccCCCCccEE
Confidence 2 2234577899999966667778888 999998753 3455555422 2223322 4678888
Q ss_pred EEEe
Q 017642 319 AVSS 322 (368)
Q Consensus 319 ~s~s 322 (368)
++..
T Consensus 450 v~ln 453 (638)
T 3sbq_A 450 VALS 453 (638)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7763
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.87 E-value=3.7 Score=34.41 Aligned_cols=172 Identities=7% Similarity=0.027 Sum_probs=79.5
Q ss_pred CcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEEeC------------CcEEEEEcCCCeEEEEEeccCCCeeEEE
Q 017642 156 NKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVLE------------QKIFVYNFADLKLLHQIETIANPKGLCA 221 (368)
Q Consensus 156 ~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~d------------~~i~vwd~~~~~~~~~~~~~~~~v~~~~ 221 (368)
..+.+||..+++....-. ....-.+++.. ++.+++.. ..+.+||+.+.+-...-..........+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 578999988776443211 11111223332 44444422 3588899877653221111111111111
Q ss_pred EecCCCeEEEEeecCCC----CeEEEEecCcceeeee---eccCcceEEEEECCCCCEEEEEeCC-----CcEEEEEECC
Q 017642 222 VSQGVGSLVLVCPGLQK----GQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTL 289 (368)
Q Consensus 222 ~~~~~~~~~l~~~g~~d----g~i~i~~~~~~~~~~~---~~~~~~i~~v~~sp~g~~l~s~~~d-----g~~i~iwd~~ 289 (368)
..-+ +.++++ .|... ..+.+++.....-..+ ......-..+.+ ++++++.|+.+ .. +.+||+.
T Consensus 118 ~~~~-~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~ 192 (308)
T 1zgk_A 118 GVID-GHIYAV-GGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNS-AECYYPE 192 (308)
T ss_dssp EEET-TEEEEE-CCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCC-EEEEETT
T ss_pred EEEC-CEEEEE-cCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCce-EEEEeCC
Confidence 1123 344433 23221 2344444443322222 111112223333 67777777754 35 8899987
Q ss_pred CCceeEeeEecc-CcccEEEEEEecCCCEEEEEeCC-----CeEEEEEccCCC
Q 017642 290 DGTLLQEVRRGA-DRAEIYSLAFSSNAQWLAVSSDK-----GTVHVFNLKVNS 336 (368)
Q Consensus 290 ~~~~~~~~~~~~-~~~~v~~l~~sp~~~~l~s~s~d-----g~i~iwd~~~~~ 336 (368)
+.+-.. +.... ....-..+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 193 ~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 193 RNEWRM-ITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTEEEE-CCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCeEee-CCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 765332 11110 1111122222 67777777654 468999987764
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.78 E-value=0.44 Score=38.08 Aligned_cols=104 Identities=13% Similarity=0.053 Sum_probs=59.2
Q ss_pred CCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcceeeeeeccCcc--------eEEEEECCCCCEEEEEeCCCcEEEEE
Q 017642 215 NPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASKRTKFIMAHDSR--------IACFALTQDGQLLATSSTKGTLVRIF 286 (368)
Q Consensus 215 ~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~--------i~~v~~sp~g~~l~s~~~dg~~i~iw 286 (368)
..+..++|+|++. ++ ++ .+|.++--+.....-..+.+-... -.++.|.++|.+.++ .||. |.-+
T Consensus 41 ~~~~~laf~P~G~-LY-aV---~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~-iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LY-GV---LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK-LYKA 112 (236)
T ss_dssp TTCSEEEECTTSC-EE-EE---ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTE-EEEE
T ss_pred ccceeEEECCCcc-EE-EE---eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCE-EEEe
Confidence 3667899999876 33 32 356665533222111111111122 378999999987777 5588 8777
Q ss_pred ECCCCceeE-----eeEeccCcccEEEEEEecCCCEEEEEeCCCeEE
Q 017642 287 NTLDGTLLQ-----EVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVH 328 (368)
Q Consensus 287 d~~~~~~~~-----~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~ 328 (368)
+-.+...-. ...+...-..+..|.|.|+|.+.++. |+.++
T Consensus 113 ~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 113 SPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp SCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 753321110 11110012468999999999987776 77643
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.51 Score=40.61 Aligned_cols=113 Identities=12% Similarity=0.135 Sum_probs=63.7
Q ss_pred CccEEE--eCCcEEEEEcCCCeEEEEEeccC-CCeeEEEE--ecCCCeEEEEeecCCCCeEEEEecCcce-eeeeec---
Q 017642 186 DRIIVV--LEQKIFVYNFADLKLLHQIETIA-NPKGLCAV--SQGVGSLVLVCPGLQKGQVRVEHYASKR-TKFIMA--- 256 (368)
Q Consensus 186 ~~~~l~--~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~~~l~~~g~~dg~i~i~~~~~~~-~~~~~~--- 256 (368)
++.+++ .||.|+-+|.++|+.+..++... .+.....- .+.+...+++. ...||.+..++..... ...+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~-p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIE-PFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEEC-CSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEE-ECCCCEEEEEECCCCcEEeeeccccc
Confidence 344444 69999999999999999886541 12111000 01122333321 2468888775544322 111111
Q ss_pred -cCcceEE---EEE-C----CCCCEEEEEeCCCcEEEEEECCCCceeEeeEec
Q 017642 257 -HDSRIAC---FAL-T----QDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRG 300 (368)
Q Consensus 257 -~~~~i~~---v~~-s----p~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~ 300 (368)
...++.. ..+ . ..+..+++|+.+|. +.-.|+.+|+.+.++...
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEESTT
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEecC
Confidence 1122221 001 0 13457889999999 999999999999888753
No 339
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.12 E-value=4.5 Score=33.62 Aligned_cols=187 Identities=10% Similarity=0.045 Sum_probs=89.0
Q ss_pred CCCEEEEEe-C-----CeEEEEEecCCC---cceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCC
Q 017642 96 DHGCFAAGT-D-----HGFRIYNCDPFR---EIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (368)
Q Consensus 96 ~g~~l~~~~-d-----~~i~iw~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~ 166 (368)
++++++.|+ + +.+.+||..+.. -.....+. ...... .+....+.++++++... .-....+.+||+.+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p-~~r~~~-~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMN-VRRGLA-GATTLGDMIYVSGGFDG-SRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCS-SCCBSC-EEEEETTEEEEECCBCS-SCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCC-CCccce-eEEEECCEEEEEcccCC-CcccceEEEEcCCCC
Confidence 566777776 3 238888887665 33222222 111111 22223555555554332 111257999998887
Q ss_pred cEEEEEe--cCCceeEEEEeeCccEEEe--------CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecC
Q 017642 167 RCIGELS--FRSEVRSVKLRRDRIIVVL--------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 167 ~~~~~~~--~~~~v~~~~~~~~~~~l~~--------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
+....-. ....-.++... ++++++. -..+.+||+.+.+-...-..........+... ++.++++ |+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~--GG 214 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL-NDHIYVV--GG 214 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEE--CC
T ss_pred eEEECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE-CCEEEEE--eC
Confidence 6443322 22222223332 5555551 24689999987654322111111111111222 3444443 33
Q ss_pred CC-----CeEEEEecCcceeeeee---ccCcceEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCc
Q 017642 237 QK-----GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGT 292 (368)
Q Consensus 237 ~d-----g~i~i~~~~~~~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~ 292 (368)
.+ ..+.+++.....-..+. ........+.+ ++++++.|+.++ . |.+||+.+.+
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 280 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSS-IECYDPIIDS 280 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEE-EEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCccccc-EEEEcCCCCe
Confidence 32 34556655543332222 11112223333 677777777653 4 7888987654
No 340
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.33 E-value=5.9 Score=33.32 Aligned_cols=228 Identities=12% Similarity=0.061 Sum_probs=100.9
Q ss_pred EEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCC---CCC--CCCCcEEEEeCCCCcEEEEEe
Q 017642 99 CFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGP---DPQ--YPLNKVMIWDDHQSRCIGELS 173 (368)
Q Consensus 99 ~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~---d~~--~~~~~i~vwd~~~~~~~~~~~ 173 (368)
+++.|+ ..+.+||..+.+-.. ..+.........++....+.+++++|.. +.. .....+.+||..+++....-.
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc-cceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344444 347888876655432 1221012222334444556666666621 100 000137888988776543211
Q ss_pred --cCCceeEEEEeeCccEEE---eC-------CcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCC---
Q 017642 174 --FRSEVRSVKLRRDRIIVV---LE-------QKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQK--- 238 (368)
Q Consensus 174 --~~~~v~~~~~~~~~~~l~---~d-------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~d--- 238 (368)
....-.+++.. ++++++ .+ ..+.+||+.+.+-...-..........+...+ +.++++ .|..+
T Consensus 96 ~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~-~~iyv~-GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHN-GMIYCL-GGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEET-TEEEEE-CCEESSSC
T ss_pred CCccccccceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEEC-CEEEEE-cCCCCCCC
Confidence 11122233333 444444 22 25888898776533221111111111122233 344433 23211
Q ss_pred --CeEEEEecCcceeeeee---ccCcceEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCceeEeeEeccCcccEEE
Q 017642 239 --GQVRVEHYASKRTKFIM---AHDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTLLQEVRRGADRAEIYS 308 (368)
Q Consensus 239 --g~i~i~~~~~~~~~~~~---~~~~~i~~v~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~ 308 (368)
..+.+++.....-..+. ........+.+ ++++++.|+.++ . +.+||+.+.+-.. +........-.+
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~-~~~~p~~r~~~~ 248 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSAS-VEAFDLKTNKWEV-MTEFPQERSSIS 248 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEE-EEEEETTTCCEEE-CCCCSSCCBSCE
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccce-EEEEECCCCeEEE-CCCCCCcccceE
Confidence 23555555443322221 11111222333 667777776543 3 7789987765332 211101111112
Q ss_pred EEEecCCCEEEEEeCC--------------CeEEEEEccCCC
Q 017642 309 LAFSSNAQWLAVSSDK--------------GTVHVFNLKVNS 336 (368)
Q Consensus 309 l~~sp~~~~l~s~s~d--------------g~i~iwd~~~~~ 336 (368)
++ .-++++++.|+.+ ..+.+||+++.+
T Consensus 249 ~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 249 LV-SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EE-EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EE-EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 22 2356777777643 357788887654
No 341
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.00 E-value=7.5 Score=33.91 Aligned_cols=163 Identities=10% Similarity=0.067 Sum_probs=94.0
Q ss_pred CcEEEEeCCCC--cEEEEEec-------CCceeEEEEe---eC----ccEEE----eCCcEEEEEcCCCeEEEEEecc--
Q 017642 156 NKVMIWDDHQS--RCIGELSF-------RSEVRSVKLR---RD----RIIVV----LEQKIFVYNFADLKLLHQIETI-- 213 (368)
Q Consensus 156 ~~i~vwd~~~~--~~~~~~~~-------~~~v~~~~~~---~~----~~~l~----~d~~i~vwd~~~~~~~~~~~~~-- 213 (368)
-+|.+||+.++ +.++.+.. ...+..+++. ++ +.++. ....|.|+|+.+++.-+.+...
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 57999999999 99988863 2357788887 21 22222 3578999999998766554210
Q ss_pred ----------------CCCeeEEEEecC----CCeEEEEeecCCCCeEEEE---ecCc---ceeeeeeccC---cceEEE
Q 017642 214 ----------------ANPKGLCAVSQG----VGSLVLVCPGLQKGQVRVE---HYAS---KRTKFIMAHD---SRIACF 264 (368)
Q Consensus 214 ----------------~~~v~~~~~~~~----~~~~~l~~~g~~dg~i~i~---~~~~---~~~~~~~~~~---~~i~~v 264 (368)
...+..++++|+ ++.+++.. -+.....+|- ..+. ..++.+ +.. ..-..+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p-lss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA-GSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE-SSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE-CCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceE
Confidence 124566788887 56655543 2222333331 1111 111222 222 233456
Q ss_pred EEC-CCCCEEEEEeCCCcEEEEEECCC-C---ceeEeeEeccCcccEEEEEEecCCCEEEEE
Q 017642 265 ALT-QDGQLLATSSTKGTLVRIFNTLD-G---TLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (368)
Q Consensus 265 ~~s-p~g~~l~s~~~dg~~i~iwd~~~-~---~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 321 (368)
+++ .+|.++++--+... |..|+..+ . +....+.....-..+..+.+..+|.+.+..
T Consensus 281 ~~D~~~G~ly~~~~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EECTTTCEEEEEESSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EEeCCCCeEEEEeccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 675 67777777777777 99999765 1 222333322122356777777777655554
No 342
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.47 E-value=7.1 Score=32.76 Aligned_cols=68 Identities=21% Similarity=0.221 Sum_probs=34.8
Q ss_pred EeCCeEEEEecCC--CCCCCCCcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEEe---------CCcEEEEEcCC
Q 017642 137 FRCNILALVGGGP--DPQYPLNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVL---------EQKIFVYNFAD 203 (368)
Q Consensus 137 ~~~~~~~~~s~~~--d~~~~~~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~---------d~~i~vwd~~~ 203 (368)
...+.+++++|.. +..-....+.+||..+++-...-. ....-.+++. -++++++. -..+.+||+.+
T Consensus 96 ~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 96 EALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp EETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTT
T ss_pred EECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCC
Confidence 3356666665521 101112579999998875433222 1212222333 34554442 13689999987
Q ss_pred Ce
Q 017642 204 LK 205 (368)
Q Consensus 204 ~~ 205 (368)
.+
T Consensus 175 ~~ 176 (315)
T 4asc_A 175 FE 176 (315)
T ss_dssp TE
T ss_pred Ce
Confidence 64
No 343
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.18 E-value=7.3 Score=32.46 Aligned_cols=188 Identities=14% Similarity=0.061 Sum_probs=88.8
Q ss_pred CCCEEEEEe-C----CeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEE
Q 017642 96 DHGCFAAGT-D----HGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCIG 170 (368)
Q Consensus 96 ~g~~l~~~~-d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~ 170 (368)
++++++.|+ + +.+.+||..+.+-.....+. ...... .+....+.+++++|..........+.+||..+.+...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP-TPRDSL-AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS-SCCBSC-EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC-ccccce-eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 666777776 3 34778887665443333332 112211 2223355566665533111122579999988876443
Q ss_pred EEe--cCCceeEEEEeeCccEEEe------------CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecC
Q 017642 171 ELS--FRSEVRSVKLRRDRIIVVL------------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGL 236 (368)
Q Consensus 171 ~~~--~~~~v~~~~~~~~~~~l~~------------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~ 236 (368)
.-. ....-.+++.. ++++++. -..+.+||+.+.+-...-..........+..- ++.++++ |+
T Consensus 133 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~--GG 208 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAV--GG 208 (306)
T ss_dssp ECCCSSCCBSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEE--CC
T ss_pred CCCCcCCcceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEE--eC
Confidence 322 22222223333 4554441 24588999987753322111111111111222 3344443 33
Q ss_pred CC-----CeEEEEecCcceeeee---eccCcceEEEEECCCCCEEEEEeCC-----CcEEEEEECCCCc
Q 017642 237 QK-----GQVRVEHYASKRTKFI---MAHDSRIACFALTQDGQLLATSSTK-----GTLVRIFNTLDGT 292 (368)
Q Consensus 237 ~d-----g~i~i~~~~~~~~~~~---~~~~~~i~~v~~sp~g~~l~s~~~d-----g~~i~iwd~~~~~ 292 (368)
.+ ..+.+++.....-..+ ........++.+ ++++++.|+.+ .. +.+||..+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGH-ILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCE-EEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeee-EEEEcCCCCe
Confidence 32 2344555444332222 211222333333 67788888754 34 8889987754
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.17 E-value=13 Score=35.41 Aligned_cols=196 Identities=13% Similarity=0.074 Sum_probs=93.9
Q ss_pred CCCCEEEEEe-C----CeEEEEEecCCCcceEE-E-----cccCCceeEEEEEEe-CCeEEEEecCCCCCCCCCcEEEEe
Q 017642 95 QDHGCFAAGT-D----HGFRIYNCDPFREIFRR-D-----FERGGGIGVVEMLFR-CNILALVGGGPDPQYPLNKVMIWD 162 (368)
Q Consensus 95 ~~g~~l~~~~-d----~~i~iw~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~-~~~~~~~s~~~d~~~~~~~i~vwd 162 (368)
-++.+++.|+ + +.+.+||..+..-.... . +. ............ .+.+++++|.....-.-+.+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p-~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVP-VARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCC-CCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCC-ccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 5677777777 3 23788888765543332 1 11 122222223332 555555555332110124689999
Q ss_pred CCCCcEEEEEe--cCCceeEEEEeeCccEEEeCC-----cEEEEEcCCCeEEEEEe-----ccCCCeeEEEEecCCCeEE
Q 017642 163 DHQSRCIGELS--FRSEVRSVKLRRDRIIVVLEQ-----KIFVYNFADLKLLHQIE-----TIANPKGLCAVSQGVGSLV 230 (368)
Q Consensus 163 ~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~d~-----~i~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~ 230 (368)
..+.+....-. ....-.+++...++++++..| .+.+||..+.+-...-. ........+.+..+.+.++
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 88865433222 222223333323666655222 79999998765322111 1111222344554434545
Q ss_pred EEeecCC-C-----CeEEEEecCcce------eeeeec----cCcceEEEEECCCCCEEEEEeCC--------CcEEEEE
Q 017642 231 LVCPGLQ-K-----GQVRVEHYASKR------TKFIMA----HDSRIACFALTQDGQLLATSSTK--------GTLVRIF 286 (368)
Q Consensus 231 l~~~g~~-d-----g~i~i~~~~~~~------~~~~~~----~~~~i~~v~~sp~g~~l~s~~~d--------g~~i~iw 286 (368)
++ .|.. + ..+.+++..... -..+.. .......+. ..++++++.|+.+ .. |.+|
T Consensus 555 v~-GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~-v~~y 631 (695)
T 2zwa_A 555 IL-GGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNS-IISL 631 (695)
T ss_dssp EE-CCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTS-EEEE
T ss_pred EE-CCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCe-EEEE
Confidence 44 2321 2 245555544433 111211 111122233 3337777777742 45 8999
Q ss_pred ECCCCcee
Q 017642 287 NTLDGTLL 294 (368)
Q Consensus 287 d~~~~~~~ 294 (368)
|+.+.+-.
T Consensus 632 d~~t~~W~ 639 (695)
T 2zwa_A 632 DPLSETLT 639 (695)
T ss_dssp ETTTTEEE
T ss_pred ECCCCeEE
Confidence 99876543
No 345
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.87 E-value=7.6 Score=32.25 Aligned_cols=188 Identities=14% Similarity=0.096 Sum_probs=87.0
Q ss_pred CCCEEEEEe-CC-----eEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCCcEE
Q 017642 96 DHGCFAAGT-DH-----GFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQSRCI 169 (368)
Q Consensus 96 ~g~~l~~~~-d~-----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~ 169 (368)
++++++.|+ ++ .+.+||..+.+-.....+. ..... ..+....+.+++++|.... ..-..+.+||+.+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMR-DRRST-LGAAVLNGLLYAVGGFDGS-TGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCS-SCCBS-CEEEEETTEEEEEEEECSS-CEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCC-ccccc-eEEEEECCEEEEEcCCCCC-ccCceEEEEeCCCCeEe
Confidence 667777776 32 2777887655433322222 11111 1222335666666653320 00135888998877644
Q ss_pred EEEe--cCCceeEEEEeeCccEEEe----------CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCeEEEEeecCC
Q 017642 170 GELS--FRSEVRSVKLRRDRIIVVL----------EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQ 237 (368)
Q Consensus 170 ~~~~--~~~~v~~~~~~~~~~~l~~----------d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~ 237 (368)
..-. ....-.+++.. ++++++. -..+.+||+.+.+-...-..........+... ++.++++ |+.
T Consensus 138 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~--GG~ 213 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAV--GGH 213 (302)
T ss_dssp EECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEE--CCB
T ss_pred ecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEE--CCC
Confidence 3322 22222233333 4444441 23588999987653322111111111111122 3344443 333
Q ss_pred C-----CeEEEEecCcceeeeeec---cCcceEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCce
Q 017642 238 K-----GQVRVEHYASKRTKFIMA---HDSRIACFALTQDGQLLATSSTKG-----TLVRIFNTLDGTL 293 (368)
Q Consensus 238 d-----g~i~i~~~~~~~~~~~~~---~~~~i~~v~~sp~g~~l~s~~~dg-----~~i~iwd~~~~~~ 293 (368)
+ ..+.+++.....-..+.. .......+.+ ++++++.|+.++ . +.+||+.+.+-
T Consensus 214 ~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W 279 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLAS-VEYYNPTTDKW 279 (302)
T ss_dssp SSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEE
T ss_pred CCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCccccc-EEEEcCCCCeE
Confidence 3 245555554433222221 1111222333 677777777653 4 88999877653
No 346
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.71 E-value=8.3 Score=32.41 Aligned_cols=208 Identities=7% Similarity=-0.002 Sum_probs=111.9
Q ss_pred EEEcCCCCEEEEEe-CC------------e--EEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEec--CCCCCC
Q 017642 91 ISFNQDHGCFAAGT-DH------------G--FRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGG--GPDPQY 153 (368)
Q Consensus 91 ~~~s~~g~~l~~~~-d~------------~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~d~~~ 153 (368)
--++++|.+|.... .. . |+..+++..+.. . +. ... ...+....+.++++.. ...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~--~-l~-~~~--~~~~s~~g~~Iy~~~~~~~~~--- 128 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST--V-LD-PDP--CIYASLIGNYIYYLHYDTQTA--- 128 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE--E-EE-CSC--EEEEEEETTEEEEEEESSSSC---
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce--E-ee-cCC--ccEEEEeCCEEEEEeecCCCC---
Confidence 34688999998776 32 2 555555544322 2 21 222 2255667777777661 222
Q ss_pred CCCcEEEEeCCCCcEEEEEe-cCCceeEEEEeeCccEEE--e--CCcEEEEEcCCCeEEEEEeccCCCeeEEEEecCCCe
Q 017642 154 PLNKVMIWDDHQSRCIGELS-FRSEVRSVKLRRDRIIVV--L--EQKIFVYNFADLKLLHQIETIANPKGLCAVSQGVGS 228 (368)
Q Consensus 154 ~~~~i~vwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~--~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 228 (368)
..|...++..... ..+. +.. ..+++++..+. . ...|++.++..+.....+. +... ..+.|+++.
T Consensus 129 --~~Iy~~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~ 197 (302)
T 3s25_A 129 --TSLYRIRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTN 197 (302)
T ss_dssp --EEEEEEETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTE
T ss_pred --ceEEEEECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCE
Confidence 5677777664433 3333 322 45677777777 2 4688888887665444333 2222 346689988
Q ss_pred EEEEeecCCCCeEEEEecCcceeeeeeccCcceEEEEECCCCCEEEEEeC--CCcEEEEEECCCCceeEeeEeccCcccE
Q 017642 229 LVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTQDGQLLATSST--KGTLVRIFNTLDGTLLQEVRRGADRAEI 306 (368)
Q Consensus 229 ~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~v~~sp~g~~l~s~~~--dg~~i~iwd~~~~~~~~~~~~~~~~~~v 306 (368)
++..- ......|..-..++.....+... .+ ..|+|++++|+.+.. .+. |..-++. |...+.+... .+
T Consensus 198 iy~t~-~~~~~~I~~~~ldG~~~~~Lt~~--~~--~~~~~~g~~Iy~~~~~~~~~-i~~~~~D-G~~r~~l~~~----~~ 266 (302)
T 3s25_A 198 VYYMD-VNRDNAIVHVNINNPNPVVLTEA--NI--EHYNVYGSLIFYQRGGDNPA-LCVVKND-GTGFKELAKG----EF 266 (302)
T ss_dssp EEEEE-GGGTTEEEEECSSSCCCEECSCS--CE--EEEEEETTEEEEEECSSSCE-EEEEETT-SCCCEEEEES----CE
T ss_pred EEEEE-cCCCcEEEEEECCCCCeEEEeCC--Cc--ceEEECCCEEEEEECCCCcE-EEEEECC-CCccEEeeCC----cc
Confidence 66653 22224565544455444444322 23 337788888776533 344 6666764 4333444431 23
Q ss_pred EEEEEecCCCEEEEEe-CCCeEEEEE
Q 017642 307 YSLAFSSNAQWLAVSS-DKGTVHVFN 331 (368)
Q Consensus 307 ~~l~~sp~~~~l~s~s-~dg~i~iwd 331 (368)
. .+++.+.+|+-.. ..+.|..-+
T Consensus 267 ~--~i~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 267 C--NINVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp E--EEEECSSEEEEEETTTCCEEEEE
T ss_pred c--eEEEeCCEEEEEECCCCeEEEEE
Confidence 3 3455677776554 345544333
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=88.81 E-value=13 Score=33.45 Aligned_cols=106 Identities=14% Similarity=0.092 Sum_probs=59.0
Q ss_pred CeeEEEEecCCC-eEEEEeecCCCCeEEEEecCcce----eeeee---------ccCcceEEEEECCC----CCEEEEEe
Q 017642 216 PKGLCAVSQGVG-SLVLVCPGLQKGQVRVEHYASKR----TKFIM---------AHDSRIACFALTQD----GQLLATSS 277 (368)
Q Consensus 216 ~v~~~~~~~~~~-~~~l~~~g~~dg~i~i~~~~~~~----~~~~~---------~~~~~i~~v~~sp~----g~~l~s~~ 277 (368)
.-..++|.|++. .++++ ...|.|++.+.++.. +..+. ........|+|+|+ +.+.++-+
T Consensus 15 ~P~~~a~~pdG~~rl~V~---er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt 91 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFIL---EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYT 91 (463)
T ss_dssp SEEEEECCSSSSCCEEEE---ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEECCCCCeEEEEE---eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEe
Confidence 445689999986 44443 367889886544321 11111 11356789999996 44333322
Q ss_pred C--C----------CcEEEEEECCC----------CceeEeeEeccCcccEEEEEEecCCCEEEEEeCCC
Q 017642 278 T--K----------GTLVRIFNTLD----------GTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKG 325 (368)
Q Consensus 278 ~--d----------g~~i~iwd~~~----------~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg 325 (368)
. + .. |.-|.+.. .+.+..+...........|.|.|||.+.++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~-v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 92 TNQERWAIGPHDHILR-VVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp ECCCSSCSSSSCEEEE-EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCCCcccCCcccceE-EEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1 13 44455532 12333333211122468899999999877766543
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=87.49 E-value=13 Score=31.79 Aligned_cols=22 Identities=9% Similarity=0.034 Sum_probs=15.2
Q ss_pred CCeEEEEecCCCCCCCCCcEEEEeCCC
Q 017642 139 CNILALVGGGPDPQYPLNKVMIWDDHQ 165 (368)
Q Consensus 139 ~~~~~~~s~~~d~~~~~~~i~vwd~~~ 165 (368)
.+.+++++|... ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~-----~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGSAG-----TAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGGGT-----TCEEEEETTS
T ss_pred CCEEEEEeCcCC-----CeEEEEcccc
Confidence 566666666543 6799999864
No 349
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.87 E-value=7.7 Score=38.57 Aligned_cols=38 Identities=8% Similarity=0.146 Sum_probs=32.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 260 RIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 260 ~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
.+.+++..++..++++.+.|++ +|||++.+++++.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeeec
Confidence 4677777888889999999999 9999999999887754
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=85.10 E-value=15 Score=30.39 Aligned_cols=222 Identities=13% Similarity=0.015 Sum_probs=110.0
Q ss_pred CEEEEEEcCCCCEEEEEeCCeEEEEEecCCCcceEEEcccCCceeEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCC
Q 017642 87 TLLHISFNQDHGCFAAGTDHGFRIYNCDPFREIFRRDFERGGGIGVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS 166 (368)
Q Consensus 87 ~v~~~~~s~~g~~l~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~ 166 (368)
.|..|+...... ++.. |+.|..|-.......-... .....+..++......+++. | |.|+.|-....
T Consensus 25 ~i~~ia~G~~h~-~~l~-~G~v~~wG~n~~Gqlg~p~---~~~~~i~~ia~G~~hs~~l~---~-----G~v~~wG~n~~ 91 (282)
T 3qhy_B 25 GVDAIAGGYFHG-LALK-GGKVLGWGANLNGQLTMPA---ATQSGVDAIAAGNYHSLALK---D-----GEVIAWGGNED 91 (282)
T ss_dssp SCCEEEECSSEE-EEEE-TTEEEEEECCSSSTTSCCG---GGGSCCCEEEECSSEEEEEE---T-----TEEEEEECCTT
T ss_pred CCcEEEeCCCeE-EEEE-CCEEEEEeCCCCCCCCCCc---cCCCCEEEEEeCCCEEEEEE---C-----CEEEEeeCCCC
Confidence 455555543322 2333 7778888755433221111 12234556666555555552 3 88988875432
Q ss_pred -cEEEEEecCCceeEEEEeeCccEEEeCCcEEEEEcCC-CeEEEEEeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEE
Q 017642 167 -RCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFAD-LKLLHQIETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVE 244 (368)
Q Consensus 167 -~~~~~~~~~~~v~~~~~~~~~~~l~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~ 244 (368)
+.-........|..++...+..+++.+|.|+.|-... +++- .-......+..++ ....+ .++.+ ||.+..|
T Consensus 92 Gqlg~P~~~~~~v~~ia~G~~hs~al~~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~--~G~~~-~~~l~---~G~v~~w 164 (282)
T 3qhy_B 92 GQTTVPAEARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTT-VPAEAQSGVTALD--GGVYT-ALAVK---NGGVIAW 164 (282)
T ss_dssp STTCCCGGGSSSEEEEEEETTEEEEEETTEEEEEECCTTSTTS-CCGGGGSSEEEEE--ECSSE-EEEEE---TTEEEEE
T ss_pred CCCCCCcccCCCeEEEECcCCEEEEEeCCeEEEecCCCCCcCC-CCccCCCCeEEEE--cccCE-EEEEE---CCEEEEe
Confidence 2111111245677777776665555689999997644 2221 1111122343333 23333 23332 6888876
Q ss_pred ecCcc-eeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEEeC
Q 017642 245 HYASK-RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSD 323 (368)
Q Consensus 245 ~~~~~-~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~ 323 (368)
-.... .+..-..-...|..|+.-.+. .++. .||. |..|-......+- +... ....|..|+...+...++ .
T Consensus 165 G~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~-v~~wG~n~~gqlg-~p~~-~~~~v~~i~~G~~h~~al--~- 235 (282)
T 3qhy_B 165 GDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGK-VIAWGDNRYKQTT-VPTE-ALSGVSAIASGEWYSLAL--K- 235 (282)
T ss_dssp ECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTE-EEEEECCTTSTTC-CCGG-GGSSCCEEEECSSCEEEE--E-
T ss_pred cCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCe-EEEEECCCCCCCC-CCcc-cCCCceEEEcCCCEEEEE--E-
Confidence 55431 111111113457777654332 3333 5888 9999754322111 1111 123567776554333333 3
Q ss_pred CCeEEEEEccCCCC
Q 017642 324 KGTVHVFNLKVNSG 337 (368)
Q Consensus 324 dg~i~iwd~~~~~~ 337 (368)
||.|+.|-.....+
T Consensus 236 ~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 236 NGKVIAWGSSRTAP 249 (282)
T ss_dssp TTEEEEESTTCCCC
T ss_pred CCEEEEecCCCCcc
Confidence 89999997665444
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.29 E-value=8.9 Score=38.14 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=29.0
Q ss_pred ccEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 304 AEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 304 ~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
..+.+++..++..++++-+.|+++|||++.+++
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence 357788888888999999999999999999875
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=80.38 E-value=41 Score=32.01 Aligned_cols=194 Identities=7% Similarity=0.018 Sum_probs=92.1
Q ss_pred eCCeEEEEecCCCCCCCCCcEEEEeCCCCcEEEEE--------ecCCceeEEEEee-CccEEEe---------CCcEEEE
Q 017642 138 RCNILALVGGGPDPQYPLNKVMIWDDHQSRCIGEL--------SFRSEVRSVKLRR-DRIIVVL---------EQKIFVY 199 (368)
Q Consensus 138 ~~~~~~~~s~~~d~~~~~~~i~vwd~~~~~~~~~~--------~~~~~v~~~~~~~-~~~~l~~---------d~~i~vw 199 (368)
..+.+++++|... -.-..+.+||..+++....- .....-.+++... ++.+++. -..+.+|
T Consensus 396 ~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEE
Confidence 3445555554321 11256889998877644332 1112223344442 5555541 1358899
Q ss_pred EcCCCeEEEEEeccCCCee-EEEEecCCCeEEEEeecCCCC--eEEEEecCcceeeeeec------cCcceEEEEECCC-
Q 017642 200 NFADLKLLHQIETIANPKG-LCAVSQGVGSLVLVCPGLQKG--QVRVEHYASKRTKFIMA------HDSRIACFALTQD- 269 (368)
Q Consensus 200 d~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~g~~dg--~i~i~~~~~~~~~~~~~------~~~~i~~v~~sp~- 269 (368)
|..+.+-...-........ +++...++ .+++ . |+.++ .+.+++.....-..+.. ......++.+..+
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~-~iyv-~-GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDG-NVLI-L-GGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVS 550 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTS-CEEE-E-CCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTT
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCC-EEEE-E-CCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCC
Confidence 9887543221111111111 12221244 3343 3 33332 46666655433322221 1122233555544
Q ss_pred CCEEEEEeC--C-----CcEEEEEECCCCce-----eEeeEec-cCcccEEEEEEecCCCEEEEEeC--------CCeEE
Q 017642 270 GQLLATSST--K-----GTLVRIFNTLDGTL-----LQEVRRG-ADRAEIYSLAFSSNAQWLAVSSD--------KGTVH 328 (368)
Q Consensus 270 g~~l~s~~~--d-----g~~i~iwd~~~~~~-----~~~~~~~-~~~~~v~~l~~sp~~~~l~s~s~--------dg~i~ 328 (368)
+++++.|+. + .. +.+||+.+.+. ...+... .....-.+++...++++++.|+. ...|.
T Consensus 551 ~~iyv~GG~~~~~~~~~~~-v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 629 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDK-AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSII 629 (695)
T ss_dssp TEEEEECCBCTTSSCBCCE-EEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEE
T ss_pred CEEEEECCcCCCCCeeeCc-EEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEE
Confidence 677777765 2 34 88999987761 2222210 01111122333344777777764 24589
Q ss_pred EEEccCCCC
Q 017642 329 VFNLKVNSG 337 (368)
Q Consensus 329 iwd~~~~~~ 337 (368)
+||+.+.+-
T Consensus 630 ~yd~~t~~W 638 (695)
T 2zwa_A 630 SLDPLSETL 638 (695)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCeE
Confidence 999887643
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=79.66 E-value=12 Score=35.57 Aligned_cols=73 Identities=21% Similarity=0.201 Sum_probs=46.2
Q ss_pred cceEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeEeccCc-----------ccEEEEEEecCCCEEEEEe--CCC
Q 017642 259 SRIACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR-----------AEIYSLAFSSNAQWLAVSS--DKG 325 (368)
Q Consensus 259 ~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~-----------~~v~~l~~sp~~~~l~s~s--~dg 325 (368)
..|.++.+ +..+|++.+.|.+ +|+||+++++++......... ..-.-+... +.++++-. .+|
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~--~~~lv~y~P~~~G 296 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLY--NNTLVTLLPLENG 296 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEES--SSEEEEEETTTTC
T ss_pred ceEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhe--eeEEEEEecCCCC
Confidence 34666665 4679999999999 999999999988776542110 000001111 24555443 568
Q ss_pred eEEEEEccCCC
Q 017642 326 TVHVFNLKVNS 336 (368)
Q Consensus 326 ~i~iwd~~~~~ 336 (368)
..++|++....
T Consensus 297 ~Fk~~~l~~~~ 307 (729)
T 3f7f_A 297 LFQMGTLLVDS 307 (729)
T ss_dssp EEEEEEEEC--
T ss_pred eEEEEEEEEcC
Confidence 99999996544
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=79.58 E-value=31 Score=30.06 Aligned_cols=137 Identities=9% Similarity=0.085 Sum_probs=76.5
Q ss_pred cEEEEEcCCC--eEEEEEecc------CCCeeEEEEe---cC---CCeEEEEeecCCCCeEEEEecC-cceeeeee----
Q 017642 195 KIFVYNFADL--KLLHQIETI------ANPKGLCAVS---QG---VGSLVLVCPGLQKGQVRVEHYA-SKRTKFIM---- 255 (368)
Q Consensus 195 ~i~vwd~~~~--~~~~~~~~~------~~~v~~~~~~---~~---~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~---- 255 (368)
+|.+||+.+. +.++++.-. ......+.+. +. ++..+.++- +..+-|.|++.. ++..+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD-~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITN-FLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEE-TTTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEc-CCCCcEEEEECCCCcEEEEccCCCc
Confidence 5778899888 888777532 2235566666 22 133333432 234445554433 32221110
Q ss_pred ----------cc----CcceEEEEECCC----CCEEEEEeCCCcEEEEEECCC-----Cc---eeEeeEeccCcccEEEE
Q 017642 256 ----------AH----DSRIACFALTQD----GQLLATSSTKGTLVRIFNTLD-----GT---LLQEVRRGADRAEIYSL 309 (368)
Q Consensus 256 ----------~~----~~~i~~v~~sp~----g~~l~s~~~dg~~i~iwd~~~-----~~---~~~~~~~~~~~~~v~~l 309 (368)
+. ...|..|+++|+ ++.|......+. ++|.+.+ .. .++.+-.......-..+
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 11 236889999998 788888777775 6665532 21 12222110001233456
Q ss_pred EEe-cCCCEEEEEeCCCeEEEEEccC
Q 017642 310 AFS-SNAQWLAVSSDKGTVHVFNLKV 334 (368)
Q Consensus 310 ~~s-p~~~~l~s~s~dg~i~iwd~~~ 334 (368)
++. .+|.++++--..+.|..|+..+
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTS
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 675 5677777777888999999875
No 355
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=77.87 E-value=29 Score=28.89 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=34.5
Q ss_pred eCCeEEEEecCCC-CCCCCCcEEEEeCCCCcEEEEEe--cCCceeEEEEeeCccEEEe---------CCcEEEEEcCCCe
Q 017642 138 RCNILALVGGGPD-PQYPLNKVMIWDDHQSRCIGELS--FRSEVRSVKLRRDRIIVVL---------EQKIFVYNFADLK 205 (368)
Q Consensus 138 ~~~~~~~~s~~~d-~~~~~~~i~vwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~---------d~~i~vwd~~~~~ 205 (368)
..+.+++++|... .......+.+||..+.+-...-. ....-.+++. .++++++. -..+.+||+.+.+
T Consensus 108 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 108 VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 3566666665421 00011358889988776443322 1111122222 45555542 1358999998765
Q ss_pred E
Q 017642 206 L 206 (368)
Q Consensus 206 ~ 206 (368)
-
T Consensus 187 W 187 (318)
T 2woz_A 187 W 187 (318)
T ss_dssp E
T ss_pred E
Confidence 3
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.58 E-value=13 Score=34.54 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=41.0
Q ss_pred eEEEEECCCCCEEEEEeCC------------CcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE
Q 017642 261 IACFALTQDGQLLATSSTK------------GTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (368)
Q Consensus 261 i~~v~~sp~g~~l~s~~~d------------g~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 321 (368)
.-.|+|+++|++++.-..+ .. +.+.+..+++..+-+... ....++.++|+||++.|.+.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~-~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCE-EEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccce-EEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 4679999999966554322 12 555666677766555543 56789999999999887665
No 357
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=73.09 E-value=22 Score=32.84 Aligned_cols=60 Identities=13% Similarity=0.183 Sum_probs=41.3
Q ss_pred ceEEEEECCCCCEEEEEeC------------CCcEEEEEECCCCceeEeeEeccCcccEEEEEEecCCCEEEEE
Q 017642 260 RIACFALTQDGQLLATSST------------KGTLVRIFNTLDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVS 321 (368)
Q Consensus 260 ~i~~v~~sp~g~~l~s~~~------------dg~~i~iwd~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~ 321 (368)
....|.|+++|.+.+.... ... |..++..+++....+.. .....++.++|+||++.|.++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~-v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCE-EEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCce-EEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEE
Confidence 4678999999987663221 114 66777767776554443 234578999999999988765
No 358
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=72.63 E-value=39 Score=27.84 Aligned_cols=185 Identities=11% Similarity=0.005 Sum_probs=94.0
Q ss_pred eEEEEEEeCCeEEEEecCCCCCCCCCcEEEEeCCCC-cEEEEEecCCceeEEEEeeCccEEEeCCcEEEEEcCCCeEEEE
Q 017642 131 GVVEMLFRCNILALVGGGPDPQYPLNKVMIWDDHQS-RCIGELSFRSEVRSVKLRRDRIIVVLEQKIFVYNFADLKLLHQ 209 (368)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~d~~~~~~~i~vwd~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~d~~i~vwd~~~~~~~~~ 209 (368)
.+..++......+++. | |.|+.|-.... +.-........|..++...+..+++.||.|+.|-....-.+-.
T Consensus 25 ~i~~ia~G~~h~~~l~---~-----G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 25 GVDAIAGGYFHGLALK---G-----GKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp SCCEEEECSSEEEEEE---T-----TEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEETTEEEEEECCTTSTTCC
T ss_pred CCcEEEeCCCeEEEEE---C-----CEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEECCEEEEeeCCCCCCCCC
Confidence 4556665555555553 3 88999875432 1111111344677887777666666899999998643211110
Q ss_pred EeccCCCeeEEEEecCCCeEEEEeecCCCCeEEEEecCcc-eeeeeeccCcceEEEEECCCCCEEEEEeCCCcEEEEEEC
Q 017642 210 IETIANPKGLCAVSQGVGSLVLVCPGLQKGQVRVEHYASK-RTKFIMAHDSRIACFALTQDGQLLATSSTKGTLVRIFNT 288 (368)
Q Consensus 210 ~~~~~~~v~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~iwd~ 288 (368)
-......+..++... .+ .++. . +|.|+.|-.+.. .+-.-......|..|+.-.+ +.+.-. ||. |..|-.
T Consensus 97 P~~~~~~v~~ia~G~--~h-s~al--~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~-v~~wG~ 166 (282)
T 3qhy_B 97 PAEARSGVDAIAAGA--WA-SYAL--K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGG-VIAWGD 166 (282)
T ss_dssp CGGGSSSEEEEEEET--TE-EEEE--E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTE-EEEEEC
T ss_pred CcccCCCeEEEECcC--CE-EEEE--e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCE-EEEecC
Confidence 000122344443332 22 2333 2 788888755431 11111112345777765433 222234 688 999976
Q ss_pred CCCceeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q 017642 289 LDGTLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNSGS 338 (368)
Q Consensus 289 ~~~~~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~~~ 338 (368)
.....+. +... -...|..|+...+.. ++. .||.|+.|-.....+.
T Consensus 167 n~~gqlg-~p~~-~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 167 NYFGQTT-VPAE-AQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp CTTSTTS-CCGG-GGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTT
T ss_pred CCCCCCC-Ccee-cCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCC
Confidence 5422221 1111 124577777654332 333 5999999976654433
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.11 E-value=7.8 Score=39.43 Aligned_cols=32 Identities=28% Similarity=0.287 Sum_probs=27.4
Q ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q 017642 305 EIYSLAFSSNAQWLAVSSDKGTVHVFNLKVNS 336 (368)
Q Consensus 305 ~v~~l~~sp~~~~l~s~s~dg~i~iwd~~~~~ 336 (368)
.+.+++..++..++++-+.|+++|||++.+++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCC
Confidence 45566677888999999999999999999885
No 360
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=71.48 E-value=37 Score=32.05 Aligned_cols=69 Identities=22% Similarity=0.378 Sum_probs=43.8
Q ss_pred eEEEEE----CCCCC--EEEEEeCCCcEEEEEECCCCc-------eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeE
Q 017642 261 IACFAL----TQDGQ--LLATSSTKGTLVRIFNTLDGT-------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTV 327 (368)
Q Consensus 261 i~~v~~----sp~g~--~l~s~~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i 327 (368)
.+.|+. ..+|+ .+..|+.+|..+|+.-...+. .+.++.......+|..|.+++++..|++++.++.+
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~ 493 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 493 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEE
Confidence 455554 23454 677899999845555433221 23334433356689999999999999999888755
Q ss_pred EE
Q 017642 328 HV 329 (368)
Q Consensus 328 ~i 329 (368)
+|
T Consensus 494 kV 495 (667)
T 4gz8_A 494 QL 495 (667)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 361
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=66.91 E-value=27 Score=31.64 Aligned_cols=70 Identities=21% Similarity=0.376 Sum_probs=44.5
Q ss_pred ceEEEEECC----CCC--EEEEEeCCCcEEEEEECCCCc-------eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCe
Q 017642 260 RIACFALTQ----DGQ--LLATSSTKGTLVRIFNTLDGT-------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGT 326 (368)
Q Consensus 260 ~i~~v~~sp----~g~--~l~s~~~dg~~i~iwd~~~~~-------~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~ 326 (368)
..++|+... ++. .+..|+.+|..+|+.-...+. .+.++.......+|..|.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 356666543 243 677899999844555433321 2333433223568999999999999999998886
Q ss_pred EEE
Q 017642 327 VHV 329 (368)
Q Consensus 327 i~i 329 (368)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.92 E-value=65 Score=27.78 Aligned_cols=59 Identities=8% Similarity=0.112 Sum_probs=30.7
Q ss_pred ceEEEEECCC-CCEEEEEeCCCcEEEEEECCCCceeEeeEeccCc---ccEEEEEEecC-CCEEEEE
Q 017642 260 RIACFALTQD-GQLLATSSTKGTLVRIFNTLDGTLLQEVRRGADR---AEIYSLAFSSN-AQWLAVS 321 (368)
Q Consensus 260 ~i~~v~~sp~-g~~l~s~~~dg~~i~iwd~~~~~~~~~~~~~~~~---~~v~~l~~sp~-~~~l~s~ 321 (368)
.+.+|.++|+ ...|..+...+ |...+ ..++....+...... ..+..+.++|. ...|..+
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g--l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG--IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE--EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred ceeEEEECCCCCCEEEEEcCCe--EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 4889999986 34566665443 55544 234433333211111 24567888763 3334443
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=65.26 E-value=97 Score=29.56 Aligned_cols=236 Identities=12% Similarity=0.071 Sum_probs=113.9
Q ss_pred EEEE-EcCCCCEEEEEe-CCe-----EEEEEecCCCcceEEEcccCCce--------eEEEEEEeCCeEEEEecCCCCC-
Q 017642 89 LHIS-FNQDHGCFAAGT-DHG-----FRIYNCDPFREIFRRDFERGGGI--------GVVEMLFRCNILALVGGGPDPQ- 152 (368)
Q Consensus 89 ~~~~-~s~~g~~l~~~~-d~~-----i~iw~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~s~~~d~~- 152 (368)
..+. ++|++++++.+- +++ ++++|+.+.+.+. ..|...... .+.+|. +.++.++.+.-....
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~-~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK-NGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT-TCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC-CCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 3455 889999887764 332 8999998765431 111100111 233443 445554432111000
Q ss_pred ---CCCCcEEEEeCCCCc--EEEEEe--cCCceeEEEEeeCccE-----EE--e----CCcEEEEEcCC--CeEEEEEec
Q 017642 153 ---YPLNKVMIWDDHQSR--CIGELS--FRSEVRSVKLRRDRII-----VV--L----EQKIFVYNFAD--LKLLHQIET 212 (368)
Q Consensus 153 ---~~~~~i~vwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~-----l~--~----d~~i~vwd~~~--~~~~~~~~~ 212 (368)
-...+|+.|.+-+.. -...+. ...--.....+.++.+ ++ . ...+++.|... ++. ..+..
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 288 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINM 288 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCS
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeec
Confidence 112679999876652 233343 2222233445556552 33 1 24567777643 432 23322
Q ss_pred cCCCeeEEEEecCCCeEEEEeecC---------CCCeEEEEecCc--------ceeee-e-eccCcceEEEEECCCCCEE
Q 017642 213 IANPKGLCAVSQGVGSLVLVCPGL---------QKGQVRVEHYAS--------KRTKF-I-MAHDSRIACFALTQDGQLL 273 (368)
Q Consensus 213 ~~~~v~~~~~~~~~~~~~l~~~g~---------~dg~i~i~~~~~--------~~~~~-~-~~~~~~i~~v~~sp~g~~l 273 (368)
.... .+....++ .+++.. .+ ..+.|.+.+... ..... + ......+..+.|..+ .++
T Consensus 289 ~~~~--~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 289 PSDA--TLQGSFKE-YVFWLL-RSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp CTTC--EEEEEETT-EEEEEC-SSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred CCcc--eEeeeECC-EEEEEE-CcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 2221 12233333 434322 11 244555533332 11222 2 223446788888865 567
Q ss_pred EEEeCCCc-EEEEEECCCCc-eeEe-eEeccCcccEEEEEEecCCC-EEEEEe---CCCeEEEEEcc
Q 017642 274 ATSSTKGT-LVRIFNTLDGT-LLQE-VRRGADRAEIYSLAFSSNAQ-WLAVSS---DKGTVHVFNLK 333 (368)
Q Consensus 274 ~s~~~dg~-~i~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~sp~~~-~l~s~s---~dg~i~iwd~~ 333 (368)
++...++. .|.++|+.+++ .+.. +... ..+.+..+.+++++. ++++.+ .-+.+..+|+.
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLP-YQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCC-STTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCC-CCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 77777763 26778776664 2223 2221 124566666777765 444433 34678888775
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=63.93 E-value=5.5 Score=40.56 Aligned_cols=37 Identities=8% Similarity=0.152 Sum_probs=30.9
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEECCCCceeEeeE
Q 017642 261 IACFALTQDGQLLATSSTKGTLVRIFNTLDGTLLQEVR 298 (368)
Q Consensus 261 i~~v~~sp~g~~l~s~~~dg~~i~iwd~~~~~~~~~~~ 298 (368)
+.+++..++..++++.+.|++ +|||++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEeec
Confidence 445556678889999999999 9999999999887754
No 365
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=63.78 E-value=27 Score=32.28 Aligned_cols=57 Identities=5% Similarity=-0.032 Sum_probs=41.5
Q ss_pred ceeEEEEeeCccEEE-eCC--------------cEEEEEcCCCeEEEEEecc-CCCeeEEEEecCCCeEEEEe
Q 017642 177 EVRSVKLRRDRIIVV-LEQ--------------KIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 177 ~v~~~~~~~~~~~l~-~d~--------------~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~ 233 (368)
....|.|.++|.+.+ .|+ .++.++..+++....+... ....+.++|+||++.++++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 345788999998877 554 4667777778766655433 34678899999999887765
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=51.97 E-value=40 Score=31.30 Aligned_cols=56 Identities=5% Similarity=-0.034 Sum_probs=39.4
Q ss_pred eeEEEEeeCccEEE-eCC--------------cEEEEEcCCCeEEEEEecc-CCCeeEEEEecCCCeEEEEe
Q 017642 178 VRSVKLRRDRIIVV-LEQ--------------KIFVYNFADLKLLHQIETI-ANPKGLCAVSQGVGSLVLVC 233 (368)
Q Consensus 178 v~~~~~~~~~~~l~-~d~--------------~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~ 233 (368)
.-.|+|++.|.+++ .|+ .+.+.+..+++..+.+..+ ...++.++|+||++.+++..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 46789999998777 553 3555666677766655443 35678899999998876643
No 367
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=50.56 E-value=41 Score=30.85 Aligned_cols=69 Identities=20% Similarity=0.231 Sum_probs=42.6
Q ss_pred ceEEEEECCCC--CEEEEEeCCCcEEEEEECCCC----ceeEeeEeccCcccEE-EEEEecCCCEEEEEeCCCeEEE
Q 017642 260 RIACFALTQDG--QLLATSSTKGTLVRIFNTLDG----TLLQEVRRGADRAEIY-SLAFSSNAQWLAVSSDKGTVHV 329 (368)
Q Consensus 260 ~i~~v~~sp~g--~~l~s~~~dg~~i~iwd~~~~----~~~~~~~~~~~~~~v~-~l~~sp~~~~l~s~s~dg~i~i 329 (368)
..++|+....+ ..++.|+.+|. |+-..+... ..+.++.......+|. .|.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~-l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGK-LKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSE-EEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCe-EEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35566555433 36778999998 433334322 1233343322245785 8999999999999987765544
No 368
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.36 E-value=61 Score=30.89 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=27.3
Q ss_pred CCEEEEEEcCCCCEEEEEe-CCeEEEEEecCCCcceEEEc
Q 017642 86 PTLLHISFNQDHGCFAAGT-DHGFRIYNCDPFREIFRRDF 124 (368)
Q Consensus 86 ~~v~~~~~s~~g~~l~~~~-d~~i~iw~~~~~~~~~~~~~ 124 (368)
..|.++.+ +..+|++-+ |+.+|+|++.+++......+
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45666655 366776666 99999999999887766655
No 369
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=44.24 E-value=1.7e+02 Score=26.05 Aligned_cols=105 Identities=12% Similarity=0.074 Sum_probs=55.5
Q ss_pred CEEEEEEcCCCC--EEEEEeCCeEEEEEecCCCc-ceEEEcc----c----CCceeEEEEEEeCC-----eEEEEecCCC
Q 017642 87 TLLHISFNQDHG--CFAAGTDHGFRIYNCDPFRE-IFRRDFE----R----GGGIGVVEMLFRCN-----ILALVGGGPD 150 (368)
Q Consensus 87 ~v~~~~~s~~g~--~l~~~~d~~i~iw~~~~~~~-~~~~~~~----~----~~~~~~~~~~~~~~-----~~~~~s~~~d 150 (368)
.-+.|+|.|||. +|++-..+.|++++.+.... .....+. . ......+.++++|+ .++++.....
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 457899999995 66665577788886432210 0001111 0 11456788999986 4444432111
Q ss_pred CCC----CC--CcEEEEeCCC----------CcEEEEEe---cCCceeEEEEeeCccEEE
Q 017642 151 PQY----PL--NKVMIWDDHQ----------SRCIGELS---FRSEVRSVKLRRDRIIVV 191 (368)
Q Consensus 151 ~~~----~~--~~i~vwd~~~----------~~~~~~~~---~~~~v~~~~~~~~~~~l~ 191 (368)
... .+ ..|.-|.+.. .+.+..+. .......|+|.|||.+.+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv 154 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYI 154 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEE
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEE
Confidence 000 00 1344454432 22333332 234567899999998777
No 370
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=40.38 E-value=91 Score=28.93 Aligned_cols=58 Identities=19% Similarity=0.254 Sum_probs=37.2
Q ss_pred EEEEEeCCCcEEEEEECCCC----c-eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEE
Q 017642 272 LLATSSTKGTLVRIFNTLDG----T-LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHV 329 (368)
Q Consensus 272 ~l~s~~~dg~~i~iwd~~~~----~-~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~i 329 (368)
.+..|+.+|...|+.....+ . .+.++.......+|..|.++++...|++++.++.++|
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 67788999984455543333 1 1222322123568999999999999988887765544
No 371
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=37.16 E-value=1.4e+02 Score=28.26 Aligned_cols=69 Identities=19% Similarity=0.329 Sum_probs=44.7
Q ss_pred eEEEEEC----CCCC---EEEEEeCCCcEEEEEECCCCc-eeEeeEeccCcccEEEEEEecCC--CEEEEEeCCCeEEE
Q 017642 261 IACFALT----QDGQ---LLATSSTKGTLVRIFNTLDGT-LLQEVRRGADRAEIYSLAFSSNA--QWLAVSSDKGTVHV 329 (368)
Q Consensus 261 i~~v~~s----p~g~---~l~s~~~dg~~i~iwd~~~~~-~~~~~~~~~~~~~v~~l~~sp~~--~~l~s~s~dg~i~i 329 (368)
.+.|+.. .+++ .++.|+.+|..+|+....... .+.++..-....+|..|.++++. .+|++++.++.++|
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 5666653 3443 788899999845665554432 23333332234688899999988 89998888775544
No 372
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=32.17 E-value=1.4e+02 Score=26.93 Aligned_cols=67 Identities=18% Similarity=0.124 Sum_probs=39.8
Q ss_pred eeEEEEec----CCCeEEEEeecCCCCeEEE-EecCc--------ceeeeee--ccCcceEEEEECCCCCEEEEEeCCCc
Q 017642 217 KGLCAVSQ----GVGSLVLVCPGLQKGQVRV-EHYAS--------KRTKFIM--AHDSRIACFALTQDGQLLATSSTKGT 281 (368)
Q Consensus 217 v~~~~~~~----~~~~~~l~~~g~~dg~i~i-~~~~~--------~~~~~~~--~~~~~i~~v~~sp~g~~l~s~~~dg~ 281 (368)
.+.++... ++++.++. -|..+|.|.- -.... ..+..+. ....+|..|.++++..+|+.++.++.
T Consensus 406 lT~IaVd~v~~~~~~~tV~f-lGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMF-IGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEE-EEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred eEEEEEEEEccCCCcEEEEE-EeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 45554443 35544444 4778887754 22111 1122222 23578999999999999999998875
Q ss_pred EEEE
Q 017642 282 LVRI 285 (368)
Q Consensus 282 ~i~i 285 (368)
++|
T Consensus 485 -~~v 487 (495)
T 1q47_A 485 -AQL 487 (495)
T ss_dssp -EEE
T ss_pred -EEE
Confidence 554
No 373
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=27.54 E-value=2.3e+02 Score=25.85 Aligned_cols=68 Identities=18% Similarity=0.275 Sum_probs=42.2
Q ss_pred eEEEEECC-CC-CEEEEEeCCCcEEEEEECCCC--ceeEeeEeccCcccE-EEEEEecCCCEEEEEeCCCeEEE
Q 017642 261 IACFALTQ-DG-QLLATSSTKGTLVRIFNTLDG--TLLQEVRRGADRAEI-YSLAFSSNAQWLAVSSDKGTVHV 329 (368)
Q Consensus 261 i~~v~~sp-~g-~~l~s~~~dg~~i~iwd~~~~--~~~~~~~~~~~~~~v-~~l~~sp~~~~l~s~s~dg~i~i 329 (368)
.+.|+... +| ..+..|+.+|..+++.-...+ ..+.++.. ....+| ..|.++++...|++++.++.++|
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 55565543 22 366788899983444433222 22334443 245577 48999999999999988876655
No 374
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=27.39 E-value=2.5e+02 Score=22.84 Aligned_cols=73 Identities=19% Similarity=0.256 Sum_probs=47.8
Q ss_pred CcceEEEEECC-CCCEEEEEeCCCcEEEEEECCCCc------eeEeeEeccCcccEEEEEEecCCCEEEEEeCCCeEEEE
Q 017642 258 DSRIACFALTQ-DGQLLATSSTKGTLVRIFNTLDGT------LLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVF 330 (368)
Q Consensus 258 ~~~i~~v~~sp-~g~~l~s~~~dg~~i~iwd~~~~~------~~~~~~~~~~~~~v~~l~~sp~~~~l~s~s~dg~i~iw 330 (368)
...|..+.... +..+++..+.+|. |+-..+.... ....++. ...+..+........|+..+..|.+..+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~-iKr~~l~~~~~~~~G~~~i~lke---gD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGY-VKKIPLAEFEYKAQGMPIIKLTE---GDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSE-EEEEEGGGTTTCSTTEECSCCCT---TCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCE-EEEEEHHHhhhhcCCeEEEecCC---CCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 44566654421 4678999999999 9998875532 1122322 3356666555566678888899998888
Q ss_pred EccC
Q 017642 331 NLKV 334 (368)
Q Consensus 331 d~~~ 334 (368)
++..
T Consensus 143 ~~~e 146 (276)
T 3no0_A 143 SVRE 146 (276)
T ss_dssp EGGG
T ss_pred Ehhh
Confidence 8754
No 375
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=27.10 E-value=2.9e+02 Score=25.45 Aligned_cols=70 Identities=16% Similarity=0.277 Sum_probs=43.1
Q ss_pred ceEEEEECC----CC--CEEEEEeCCCcEEEEEECCCC------c-eeEeeEecc---------CcccEEEEEEecCCCE
Q 017642 260 RIACFALTQ----DG--QLLATSSTKGTLVRIFNTLDG------T-LLQEVRRGA---------DRAEIYSLAFSSNAQW 317 (368)
Q Consensus 260 ~i~~v~~sp----~g--~~l~s~~~dg~~i~iwd~~~~------~-~~~~~~~~~---------~~~~v~~l~~sp~~~~ 317 (368)
..+.|+... ++ ..++.|+.+|...|+...... . .+.++.... ...+|..|.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 357777653 23 367889999983355543211 1 222232210 1357889999999999
Q ss_pred EEEEeCCCeEEE
Q 017642 318 LAVSSDKGTVHV 329 (368)
Q Consensus 318 l~s~s~dg~i~i 329 (368)
|++++.++.++|
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999988876665
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=26.66 E-value=1.5e+02 Score=27.14 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=40.4
Q ss_pred CeeEEEEecCCCeEEEEeecCCCCeEEE--EecCcc---eeeee--eccCcceE-EEEECCCCCEEEEEeCCCcEEEE
Q 017642 216 PKGLCAVSQGVGSLVLVCPGLQKGQVRV--EHYASK---RTKFI--MAHDSRIA-CFALTQDGQLLATSSTKGTLVRI 285 (368)
Q Consensus 216 ~v~~~~~~~~~~~~~l~~~g~~dg~i~i--~~~~~~---~~~~~--~~~~~~i~-~v~~sp~g~~l~s~~~dg~~i~i 285 (368)
..+.++....+++.++.. |..+|.|.- ...... .+..+ .....+|. .|.+++++.+|+.++.++. ++|
T Consensus 401 ~lT~vav~~~~~~tV~fl-GT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V-~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFV-GTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQV-TRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEE-EETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEE-EEE
T ss_pred ceEEEEeeccCCeEEEEE-EcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccc-cee
Confidence 355566655555544444 778887754 221111 12222 22345775 8999999999999988764 444
No 377
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=25.14 E-value=1.2e+02 Score=28.66 Aligned_cols=58 Identities=21% Similarity=0.248 Sum_probs=36.3
Q ss_pred CEEEEEeCCCcEEEEEECCC-C---ceeEeeEeccCcccE-EEEEEecCCCEEEEEeCCCeEEE
Q 017642 271 QLLATSSTKGTLVRIFNTLD-G---TLLQEVRRGADRAEI-YSLAFSSNAQWLAVSSDKGTVHV 329 (368)
Q Consensus 271 ~~l~s~~~dg~~i~iwd~~~-~---~~~~~~~~~~~~~~v-~~l~~sp~~~~l~s~s~dg~i~i 329 (368)
..+..|+.+|. |+-.-+.. . ..+.++.......+| ..|.++++..+|+.++.++.++|
T Consensus 413 tVlFLGT~~G~-l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGK-LKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSE-EEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCce-EEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 36778899998 54333322 1 123333332234566 68999999889998887765554
No 378
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=24.52 E-value=4.2e+02 Score=24.43 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=16.3
Q ss_pred cEEEEEEec-CCCEEEEEeCCCeEEEEE
Q 017642 305 EIYSLAFSS-NAQWLAVSSDKGTVHVFN 331 (368)
Q Consensus 305 ~v~~l~~sp-~~~~l~s~s~dg~i~iwd 331 (368)
.|++|.+.+ ++.+|+++-.- .|...|
T Consensus 356 HiNsv~~d~~dd~~liSsR~~-~I~~Id 382 (571)
T 3elq_A 356 HVNSIAYDAKDDSIILSSRHQ-GVVKIG 382 (571)
T ss_dssp CEEEEEEETTTTEEEEEETTT-EEEEEE
T ss_pred EecceeEcCCCCEEEEECCcc-EEEEEc
Confidence 488999987 44677766444 443333
No 379
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.76 E-value=3.1e+02 Score=25.88 Aligned_cols=60 Identities=18% Similarity=0.184 Sum_probs=36.7
Q ss_pred cCCCeEEEEeecCCCCeEEE-EecCcc--------eeeee--eccCcceEEEEECCCCCEEEEEeCCCcEEEE
Q 017642 224 QGVGSLVLVCPGLQKGQVRV-EHYASK--------RTKFI--MAHDSRIACFALTQDGQLLATSSTKGTLVRI 285 (368)
Q Consensus 224 ~~~~~~~l~~~g~~dg~i~i-~~~~~~--------~~~~~--~~~~~~i~~v~~sp~g~~l~s~~~dg~~i~i 285 (368)
.++++.++. -|..+|.|.- ...... .+..+ .....+|..|.++++..+|++++.++. ++|
T Consensus 425 ~~g~ytVlF-LGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V-~kV 495 (667)
T 4gz8_A 425 EDGQYDVMF-IGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV-AQL 495 (667)
T ss_dssp SSCEEEEEE-EEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE-EEE
T ss_pred CCCcEEEEE-EECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE-EEE
Confidence 345443433 4778888753 221110 11122 234567999999999999999998875 554
Done!