Query 017643
Match_columns 368
No_of_seqs 244 out of 1321
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 10:25:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017643.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017643hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06429 GT8_like_1 GT8_like_1 100.0 4.4E-50 9.6E-55 378.6 22.4 234 91-362 1-256 (257)
2 PRK15171 lipopolysaccharide 1, 100.0 1.7E-49 3.8E-54 388.3 22.6 261 88-366 23-290 (334)
3 PLN02718 Probable galacturonos 100.0 2.6E-49 5.6E-54 400.7 20.1 273 86-368 309-595 (603)
4 PLN02829 Probable galacturonos 100.0 6.1E-49 1.3E-53 397.2 19.2 274 85-368 326-631 (639)
5 PLN02523 galacturonosyltransfe 100.0 2.6E-48 5.7E-53 389.2 23.0 274 85-368 243-551 (559)
6 PLN02742 Probable galacturonos 100.0 1.6E-48 3.5E-53 390.4 21.1 274 85-368 222-527 (534)
7 PLN02910 polygalacturonate 4-a 100.0 2.4E-47 5.1E-52 385.1 19.3 273 86-368 341-649 (657)
8 PLN02870 Probable galacturonos 100.0 7.5E-46 1.6E-50 370.5 17.0 270 85-368 201-524 (533)
9 PLN02659 Probable galacturonos 100.0 1.8E-45 3.9E-50 367.8 17.4 273 85-368 202-525 (534)
10 PLN02769 Probable galacturonos 100.0 3.6E-45 7.9E-50 372.0 19.4 267 86-368 326-622 (629)
11 cd06431 GT8_LARGE_C LARGE cata 100.0 2.4E-44 5.2E-49 343.8 21.7 257 91-365 3-271 (280)
12 PLN02867 Probable galacturonos 100.0 7.1E-45 1.5E-49 364.9 17.3 271 85-368 206-527 (535)
13 COG1442 RfaJ Lipopolysaccharid 100.0 1.5E-43 3.2E-48 342.1 20.3 258 90-365 2-264 (325)
14 cd00505 Glyco_transf_8 Members 100.0 6.3E-43 1.4E-47 328.4 21.7 238 91-345 1-246 (246)
15 cd04194 GT8_A4GalT_like A4GalT 100.0 5.4E-43 1.2E-47 328.7 18.0 239 91-345 1-248 (248)
16 PF01501 Glyco_transf_8: Glyco 100.0 3E-40 6.5E-45 306.5 15.7 245 92-346 1-249 (250)
17 cd06430 GT8_like_2 GT8_like_2 100.0 8.1E-37 1.7E-41 292.2 22.2 251 91-365 1-276 (304)
18 cd06432 GT8_HUGT1_C_like The C 100.0 1.3E-36 2.8E-41 286.1 19.5 228 91-338 1-239 (248)
19 cd02537 GT8_Glycogenin Glycoge 100.0 2.4E-30 5.1E-35 242.6 16.7 222 94-362 5-237 (240)
20 PLN00176 galactinol synthase 100.0 3.6E-29 7.8E-34 242.8 21.5 236 89-347 23-270 (333)
21 cd06914 GT8_GNT1 GNT1 is a fun 99.9 1.5E-23 3.2E-28 199.3 14.9 208 94-346 5-241 (278)
22 KOG1879 UDP-glucose:glycoprote 99.3 2.6E-12 5.7E-17 138.5 9.1 252 87-363 1178-1444(1470)
23 COG5597 Alpha-N-acetylglucosam 98.8 2.3E-09 4.9E-14 101.4 3.2 167 172-363 155-356 (368)
24 PF03407 Nucleotid_trans: Nucl 97.4 0.00084 1.8E-08 61.3 8.7 138 173-338 52-201 (212)
25 PF11051 Mannosyl_trans3: Mann 96.6 0.005 1.1E-07 58.9 6.8 110 93-210 4-114 (271)
26 PLN03182 xyloglucan 6-xylosylt 95.2 0.04 8.7E-07 55.1 6.1 140 183-347 195-366 (429)
27 cd02515 Glyco_transf_6 Glycosy 92.3 11 0.00023 36.1 16.3 198 89-312 34-246 (271)
28 KOG1950 Glycosyl transferase, 91.2 0.3 6.6E-06 48.8 4.9 94 248-348 196-291 (369)
29 PF03414 Glyco_transf_6: Glyco 89.6 21 0.00047 35.2 15.9 196 90-312 100-311 (337)
30 PF05637 Glyco_transf_34: gala 88.0 0.35 7.5E-06 45.5 2.4 147 173-338 60-231 (239)
31 KOG1928 Alpha-1,4-N-acetylgluc 86.0 0.92 2E-05 45.2 4.1 66 59-130 97-168 (409)
32 PLN03181 glycosyltransferase; 83.4 2.7 5.8E-05 42.5 6.1 108 183-313 196-326 (453)
33 PF04765 DUF616: Protein of un 78.8 4.8 0.0001 39.3 5.9 92 120-221 90-189 (305)
34 PF00535 Glycos_transf_2: Glyc 66.5 70 0.0015 26.1 10.5 92 102-212 10-105 (169)
35 cd04190 Chitin_synth_C C-termi 64.3 20 0.00044 33.1 6.5 24 186-209 73-97 (244)
36 PF04488 Gly_transf_sug: Glyco 61.9 4.3 9.3E-05 32.6 1.3 31 172-207 66-97 (103)
37 PF03071 GNT-I: GNT-I family; 55.9 88 0.0019 32.1 9.7 116 90-209 94-214 (434)
38 TIGR03111 glyc2_xrt_Gpos1 puta 53.0 1.6E+02 0.0035 29.9 11.4 100 90-209 50-155 (439)
39 cd04186 GT_2_like_c Subfamily 49.8 1.4E+02 0.0031 24.4 10.5 86 102-208 9-97 (166)
40 cd06439 CESA_like_1 CESA_like_ 48.7 2E+02 0.0043 25.9 10.4 101 90-209 30-133 (251)
41 PRK15383 type III secretion sy 47.2 11 0.00023 35.6 1.4 23 188-210 220-242 (335)
42 PRK15382 non-LEE encoded effec 47.0 11 0.00023 35.6 1.4 23 188-210 212-234 (326)
43 PRK15384 type III secretion sy 46.7 10 0.00023 35.7 1.3 23 188-210 217-239 (336)
44 PF03314 DUF273: Protein of un 45.3 16 0.00034 33.8 2.3 26 178-204 34-59 (222)
45 cd06434 GT2_HAS Hyaluronan syn 44.4 2.3E+02 0.0049 25.1 10.9 97 91-209 2-101 (235)
46 cd02510 pp-GalNAc-T pp-GalNAc- 42.9 1.9E+02 0.0042 27.2 9.6 98 93-209 2-107 (299)
47 cd06427 CESA_like_2 CESA_like_ 42.9 2E+02 0.0044 26.0 9.4 102 91-209 3-108 (241)
48 cd06423 CESA_like CESA_like is 42.5 1.8E+02 0.0039 23.5 9.3 88 103-209 10-102 (180)
49 cd04192 GT_2_like_e Subfamily 41.9 1.9E+02 0.0041 25.3 8.9 92 102-208 9-105 (229)
50 cd04191 Glucan_BSP_ModH Glucan 39.3 3.2E+02 0.0069 25.6 10.3 47 173-220 83-130 (254)
51 cd02514 GT13_GLCNAC-TI GT13_GL 38.5 2.4E+02 0.0051 28.0 9.5 110 94-208 6-119 (334)
52 PRK05454 glucosyltransferase M 35.6 2.7E+02 0.0059 30.4 10.2 118 89-220 124-255 (691)
53 PF07801 DUF1647: Protein of u 31.7 2.4E+02 0.0052 24.4 7.3 67 87-158 58-126 (142)
54 cd00761 Glyco_tranf_GTA_type G 29.5 2.7E+02 0.0059 21.7 8.3 29 102-132 9-37 (156)
55 PF11735 CAP59_mtransfer: Cryp 28.7 2.5E+02 0.0053 26.5 7.5 33 98-131 11-44 (241)
56 cd06421 CESA_CelA_like CESA_Ce 26.5 4.4E+02 0.0095 23.1 11.2 97 91-203 3-101 (234)
57 cd06422 NTP_transferase_like_1 26.1 1.7E+02 0.0037 26.1 5.9 23 188-210 98-120 (221)
58 cd04184 GT2_RfbC_Mx_like Myxoc 25.5 3.4E+02 0.0075 23.2 7.6 100 91-209 3-107 (202)
59 PF13896 Glyco_transf_49: Glyc 23.9 2.5E+02 0.0054 27.4 6.9 117 89-208 25-149 (317)
60 PRK11204 N-glycosyltransferase 23.6 4.1E+02 0.0089 26.4 8.6 98 90-209 55-158 (420)
61 PF10111 Glyco_tranf_2_2: Glyc 22.6 6.4E+02 0.014 23.6 9.8 91 104-208 18-111 (281)
No 1
>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=4.4e-50 Score=378.61 Aligned_cols=234 Identities=32% Similarity=0.612 Sum_probs=193.6
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHHH----hhCCCcceEEEEeChhhhhhccchh---
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLVR----STFPQLKFKVYYFDPEIVRNLISTS--- 163 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~~----~~f~~l~i~~~~~d~~~~~~~is~~--- 163 (368)
+|||+++| ||+ ++++++.|++.|++++++++|||++++.+.+.+.+ ....+.+++++.++...+.+.....
T Consensus 1 ~hiv~~~D-n~l-~~~v~i~S~l~nn~~~~~~~fhvvtd~~s~~~~~~~~~~~~~~~~~i~~~~i~~~~~~~~~~~~~~~ 78 (257)
T cd06429 1 IHVVIFSD-NRL-AAAVVINSSISNNKDPSNLVFHIVTDNQNYGAMRSWFDLNPLKIATVKVLNFDDFKLLGKVKVDSLM 78 (257)
T ss_pred CCEEEEec-chh-HHHHHHHHHHHhCCCCCceEEEEecCccCHHHHHHHHHhcCCCCceEEEEEeCcHHhhcccccchhh
Confidence 69999999 999 68888899999998778999999999998655432 2233678999999876654432211
Q ss_pred -------------hhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeeccccccccccc
Q 017643 164 -------------VRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYF 230 (368)
Q Consensus 164 -------------~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~ 230 (368)
.+..++++++|+||++|+++| +++||||||+|+||++||++||++|++|+++||++|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ip~llp-~~~kvlYLD~Dviv~~dl~eL~~~dl~~~~~aav~d--------- 148 (257)
T cd06429 79 QLESEADTSNLKQRKPEYISLLNFARFYLPELFP-KLEKVIYLDDDVVVQKDLTELWNTDLGGGVAGAVET--------- 148 (257)
T ss_pred hhhccccccccccCCccccCHHHHHHHHHHHHhh-hhCeEEEEeCCEEEeCCHHHHhhCCCCCCEEEEEhh---------
Confidence 134578899999999999999 599999999999999999999999999999999763
Q ss_pred ccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCC--CccCCCCchHHHHHhccCeeecccc
Q 017643 231 TATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSD--RIYELGSLPPFLLVFAGHVAPIEHR 308 (368)
Q Consensus 231 ~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~--~l~~~~DQd~LN~vf~g~i~~L~~~ 308 (368)
||||||||||+++||+.++++++++|++.+... ..+.++|||+||++|.|+++.||++
T Consensus 149 --------------------yfNsGV~linl~~wr~~~i~~~~~~~~~~~~~~~~~~~~~~dqd~ln~~~~~~~~~L~~~ 208 (257)
T cd06429 149 --------------------SWNPGVNVVNLTEWRRQNVTETYEKWMELNQEEEVTLWKLITLPPGLIVFYGLTSPLDPS 208 (257)
T ss_pred --------------------hcccceEEEeHHHHHhccHHHHHHHHHHHhhhcccchhhcCCccHHHHHccCeeEECChH
Confidence 899999999999999999999999999866542 3456789999999999999999999
Q ss_pred cccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhh
Q 017643 309 WNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYD 362 (368)
Q Consensus 309 wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~ 362 (368)
||+++++++.... .+ ...+++||||+|+.|||+..+. .+++++||+|.
T Consensus 209 wN~~~l~~~~~~~--~~-~~~~~~IIHy~G~~KPW~~~~~---~~~~~~w~~yl 256 (257)
T cd06429 209 WHVRGLGYNYGIR--PQ-DIKAAAVLHFNGNMKPWLRTAI---PSYKELWEKYL 256 (257)
T ss_pred HcccCCccccccc--cc-ccCCcEEEEECCCCCCcCCCCC---ChHHHHHHHHh
Confidence 9999777543211 11 1247899999999999998764 36899999996
No 2
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional
Probab=100.00 E-value=1.7e-49 Score=388.28 Aligned_cols=261 Identities=20% Similarity=0.322 Sum_probs=197.0
Q ss_pred CCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHH--H-H--hhCCCcceEEEEeChhhhhhccch
Q 017643 88 PSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETL--V-R--STFPQLKFKVYYFDPEIVRNLIST 162 (368)
Q Consensus 88 ~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l--~-~--~~f~~l~i~~~~~d~~~~~~~is~ 162 (368)
++.||||+++|++|+++++|+|.||++|+++ ..++|||++++++.+.. + + +.++ .+++++.+|.+.+.+..+.
T Consensus 23 ~~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~~-~~i~~~~id~~~~~~~~~~ 100 (334)
T PRK15171 23 KNSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQYN-TRINIYLINCERLKSLPST 100 (334)
T ss_pred CCceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhcC-CeEEEEEeCHHHHhCCccc
Confidence 3689999999999999999999999999874 57999999999875432 2 1 3443 4788999988877665332
Q ss_pred hhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeee-cccccccccccccccccccccc
Q 017643 163 SVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAP-EYCHANFSKYFTATFWSDKRFS 241 (368)
Q Consensus 163 ~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv-~d~~~~f~~~~~~~~w~~~~l~ 241 (368)
.+++.++|+||++|++||++++||||||+|+||++||++||++|+++..+||| .+.... .|.+....
T Consensus 101 ----~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~--------~~~~~~~~ 168 (334)
T PRK15171 101 ----KNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE--------WWSKRAQS 168 (334)
T ss_pred ----CcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh--------HHHHHHHh
Confidence 36788999999999999977999999999999999999999999996656654 443211 12222111
Q ss_pred cccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccC-CCccCCCCchHHHHHhccCeeecccccccccCCCCCcc
Q 017643 242 ATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKS-DRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVR 320 (368)
Q Consensus 242 ~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~-~~l~~~~DQd~LN~vf~g~i~~L~~~wN~~~l~~~~~~ 320 (368)
.+..+....|||||||||||++||++++++++++++..... .++ .++|||+||.+|.|+++.||++||++..-.....
T Consensus 169 l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~-~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~ 247 (334)
T PRK15171 169 LQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRI-THLDQDVLNILLAGKVKFIDAKYNTQFSLNYELK 247 (334)
T ss_pred cCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccce-eecChhHHHHHHcCCeEECCHhhCCccchhHHHH
Confidence 11112134699999999999999999999999999985321 233 4589999999999999999999999831111111
Q ss_pred cccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCC
Q 017643 321 GSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGH 366 (368)
Q Consensus 321 ~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~ 366 (368)
..+......+++||||+|+.|||+..+. ++++++|+.|.+..+
T Consensus 248 ~~~~~~~~~~p~IIHy~G~~KPW~~~~~---~~~~~~f~~~~~~sp 290 (334)
T PRK15171 248 DSVINPVNDETVFIHYIGPTKPWHSWAD---YPVSQYFLKAKEASP 290 (334)
T ss_pred hcccccccCCCEEEEECCCCCCCCCCCC---CchHHHHHHHHhcCC
Confidence 1111111247899999999999987653 468999999988754
No 3
>PLN02718 Probable galacturonosyltransferase
Probab=100.00 E-value=2.6e-49 Score=400.71 Aligned_cols=273 Identities=25% Similarity=0.476 Sum_probs=214.2
Q ss_pred cCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH---HhhCC-CcceEEEEeChh-hhhhcc
Q 017643 86 CDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV---RSTFP-QLKFKVYYFDPE-IVRNLI 160 (368)
Q Consensus 86 ~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~---~~~f~-~l~i~~~~~d~~-~~~~~i 160 (368)
-|++.+|||+++|+ | .+++|+|.|++.|+..+++++|||++++++.+.+. ....+ +..++++.++.. .+....
T Consensus 309 ~d~~~~Hia~~sDN-v-laasVvInSil~Ns~np~~ivFHVvTD~is~~~mk~wf~l~~~~~a~I~V~~Iddf~~lp~~~ 386 (603)
T PLN02718 309 NDPDLYHYVVFSDN-V-LACSVVVNSTISSSKEPEKIVFHVVTDSLNYPAISMWFLLNPPGKATIQILNIDDMNVLPADY 386 (603)
T ss_pred cCCcceeEEEEcCC-c-eeEEEEhhhhhhccCCCCcEEEEEEeCCCCHHHHHHHHHhCCCCCcEEEEEecchhccccccc
Confidence 47889999999998 6 49999999999997767889999999999865442 21112 468888888631 111110
Q ss_pred ch------hhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccc---
Q 017643 161 ST------SVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFT--- 231 (368)
Q Consensus 161 s~------~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~--- 231 (368)
.. +.+..++++++|+||+||++||+ ++||||||+|+||++||++||++||+|+++|||+||..++..+..
T Consensus 387 ~~~lk~l~s~~~~~~S~~~y~Rl~ipellp~-l~KvLYLD~DvVV~~DL~eL~~iDl~~~v~aaVedC~~~~~~~~~~~~ 465 (603)
T PLN02718 387 NSLLMKQNSHDPRYISALNHARFYLPDIFPG-LNKIVLFDHDVVVQRDLSRLWSLDMKGKVVGAVETCLEGEPSFRSMDT 465 (603)
T ss_pred hhhhhhccccccccccHHHHHHHHHHHHhcc-cCEEEEEECCEEecCCHHHHhcCCCCCcEEEEeccccccccchhhhhh
Confidence 00 11224678899999999999995 999999999999999999999999999999999999653221111
Q ss_pred cccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccCeeeccccccc
Q 017643 232 ATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQ 311 (368)
Q Consensus 232 ~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~i~~L~~~wN~ 311 (368)
...|+++.+...| .++.||||+|||||||++||++++++++.+|++.+.+..+|.+++++++|++|+|++++||++||+
T Consensus 466 ~lnfs~p~i~~~f-n~~~CyfNsGVlLIDLk~WReenITe~~~~~l~~n~~~~l~dqdaLpp~LlvF~gri~~LD~rWNv 544 (603)
T PLN02718 466 FINFSDPWVAKKF-DPKACTWAFGMNLFDLEEWRRQKLTSVYHKYLQLGVKRPLWKAGSLPIGWLTFYNQTVALDKRWHV 544 (603)
T ss_pred hhhccchhhhccc-CCCccccccceEEEeHHHHHhcChHHHHHHHHHhccCccccCcccccHHHHHhcCceeecChHHhc
Confidence 1124444333344 357899999999999999999999999999999776556777778888889999999999999999
Q ss_pred ccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCCCC
Q 017643 312 HGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 312 ~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 368 (368)
+++|++.....+ ..++++||||+|+.|||...+..+ |+.+|.+|..++++|
T Consensus 545 ~gLG~~~~i~~~---~i~~aaIIHYnG~~KPWle~~i~~---yr~~W~k~v~~~~~~ 595 (603)
T PLN02718 545 LGLGHESGVGAS---DIEQAAVIHYDGVMKPWLDIGIGK---YKRYWNIHVPYHHPY 595 (603)
T ss_pred cCcccccccccc---ccCCCEEEEECCCCCccccCChhh---HHHHHHhhcCCCChH
Confidence 998875432221 235789999999999999998754 999999999999876
No 4
>PLN02829 Probable galacturonosyltransferase
Probab=100.00 E-value=6.1e-49 Score=397.18 Aligned_cols=274 Identities=25% Similarity=0.500 Sum_probs=219.7
Q ss_pred ccCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH----HhhCCCcceEEEEeCh-------
Q 017643 85 VCDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV----RSTFPQLKFKVYYFDP------- 153 (368)
Q Consensus 85 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~----~~~f~~l~i~~~~~d~------- 153 (368)
.-|++..|.|+.+|+ +..++|.+.|.+.|+..|+++.|||+||..+...+. ...+....+++..++.
T Consensus 326 l~dp~l~Hy~ifSdN--VLAasVVVnStv~na~~p~k~VFHivTD~~ny~aM~~WF~~n~~~~A~v~V~nie~f~wln~~ 403 (639)
T PLN02829 326 LEDPQLYHYALFSDN--VLAAAVVVNSTVTNAKHPSKHVFHIVTDRLNYAAMRMWFLVNPPGKATIQVQNIEEFTWLNSS 403 (639)
T ss_pred ccCCccceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccchHHHHHHHhhCCCccceEEEEehhhccccccc
Confidence 347889999999997 568899999999999999999999999998755432 1223233454444321
Q ss_pred --hhhhhccch------------------h-hhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccC
Q 017643 154 --EIVRNLIST------------------S-VRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLG 212 (368)
Q Consensus 154 --~~~~~~is~------------------~-~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~ 212 (368)
..++.+-+. . .+..+++.++|+|||||++|| +++||||||+|+||++||++||++||+
T Consensus 404 ~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~ylS~lnY~RfyLPeLLP-~LdKVLYLD~DVVVqgDLseLw~iDL~ 482 (639)
T PLN02829 404 YSPVLKQLGSQSMIDYYFRAHRANSDSNLKYRNPKYLSILNHLRFYLPEIFP-KLNKVLFLDDDIVVQKDLTGLWSIDLK 482 (639)
T ss_pred ccHHHHHhhhhhhhhhhhhccccCcccccccCCcchhhHHHHHHHHHHHHhc-ccCeEEEEeCCEEeCCChHHHHhCCCC
Confidence 011110000 0 013457789999999999999 599999999999999999999999999
Q ss_pred CCeeeeecccccccccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCch
Q 017643 213 SRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLP 292 (368)
Q Consensus 213 g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd 292 (368)
|+++|||+||..+|+.+.....|+++.+...|. ...||||+|||||||++||+++++++++.|++.+.+..+|.+|.++
T Consensus 483 gkviAAVedc~~~f~r~~~~l~fs~p~i~~~Fn-~~~CyFNSGVmVINL~~WRe~nITe~y~~wm~~n~~r~L~dlgaLP 561 (639)
T PLN02829 483 GNVNGAVETCGESFHRFDRYLNFSNPLISKNFD-PHACGWAYGMNVFDLDEWKRQNITEVYHSWQKLNHDRQLWKLGTLP 561 (639)
T ss_pred CceEEEeccchhhhhhhhhhhhccchHhhhccC-CcccceecceEEEeHHHHHHhChHHHHHHHHHHccCCccccccCCC
Confidence 999999999988776666555677766665553 4789999999999999999999999999999877666788888899
Q ss_pred HHHHHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCCCC
Q 017643 293 PFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 293 ~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 368 (368)
++.++|+|++++||++||++++|++.- ..++.+ .+++||||+|+.|||...+.. +|+.+|.+|.+++++|
T Consensus 562 p~Ll~F~g~i~~LD~rWNv~GLGy~~~-v~~~~i--~~aaIIHynG~~KPWle~~i~---~yr~lW~kYl~~~~~f 631 (639)
T PLN02829 562 PGLITFWKRTYPLDRSWHVLGLGYNPN-VNQRDI--ERAAVIHYNGNMKPWLEIGIP---KYRNYWSKYVDYDQVY 631 (639)
T ss_pred hHHHHhcCceEecChhheecCCCCCcc-cchhcc--cCCeEEEECCCCCccccCCcc---cchHHHHHHHhcCchH
Confidence 999999999999999999999987532 223333 467999999999999999874 4999999999999876
No 5
>PLN02523 galacturonosyltransferase
Probab=100.00 E-value=2.6e-48 Score=389.20 Aligned_cols=274 Identities=26% Similarity=0.523 Sum_probs=211.5
Q ss_pred ccCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHH---HH-hhCCCcceEEEEeCh-hhhh--
Q 017643 85 VCDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETL---VR-STFPQLKFKVYYFDP-EIVR-- 157 (368)
Q Consensus 85 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l---~~-~~f~~l~i~~~~~d~-~~~~-- 157 (368)
.-|++..|+|+.+|+ +.+++|+|.|++.|+..|++++|||++++.+...+ +. .......++++.++. +.++
T Consensus 243 l~dp~l~Hy~ifSdN--vlAAsVvInStv~Ns~~p~~~VFHIVTD~ln~~amk~Wf~~n~~~~a~I~V~~Iedf~~ln~~ 320 (559)
T PLN02523 243 LEDPSLYHYAIFSDN--VIAASVVVNSAVKNAKEPWKHVFHVVTDRMNLAAMKVMFKMRDLNGAHVEVKAVEDYKFLNSS 320 (559)
T ss_pred ccCCCcceEEEecCc--chhhhhhHHHHHHccCCCcceEEEEEeCCCCHHHHHHHHhhCCCCCcEEEEEEeehhhhcccc
Confidence 348889999999998 89999999999999998999999999999985543 22 233355777777764 2111
Q ss_pred -----hccch----------------------hh-hhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhc
Q 017643 158 -----NLIST----------------------SV-RQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTT 209 (368)
Q Consensus 158 -----~~is~----------------------~~-~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~ 209 (368)
..+.. .. ...+.++++|+||+||++||+ ++||||||+||||++||++||++
T Consensus 321 ~~pvlk~l~s~~~~~~~f~~~~~~~~~~~~~~k~~~p~ylS~~ny~Rf~IPeLLP~-ldKVLYLD~DVVVq~DLseLw~i 399 (559)
T PLN02523 321 YVPVLRQLESANLQKFYFENKLENATKDSSNMKFRNPKYLSMLNHLRFYLPEMYPK-LHRILFLDDDVVVQKDLTGLWKI 399 (559)
T ss_pred cchHHHhhhhhhhhhhhccccccccccccccccccCcchhhHHHHHHHHHHHHhcc-cCeEEEEeCCEEecCCHHHHHhC
Confidence 00100 00 013467899999999999994 99999999999999999999999
Q ss_pred ccCCCeeeeecccccccccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCC
Q 017643 210 SLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELG 289 (368)
Q Consensus 210 dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~ 289 (368)
||+|+++|||+||...+.++.....++++.+...| +.+.||||+|||||||++||++++++++..|++.+.+..++.++
T Consensus 400 DL~gkv~aAVeDc~~~~~r~~~~ln~s~p~i~~yF-Ns~aC~wnsGVmlINL~~WRe~nITek~~~w~~ln~~~~l~Dqd 478 (559)
T PLN02523 400 DMDGKVNGAVETCFGSFHRYAQYLNFSHPLIKEKF-NPKACAWAYGMNIFDLDAWRREKCTEQYHYWQNLNENRTLWKLG 478 (559)
T ss_pred cCCCceEEEehhhhhHHHHHHHhhcccchhhhhCc-CCCcccccCCcEEEeHHHHHHhchHHHHHHHHHhcccccccccc
Confidence 99999999999995444433322234444444344 45789999999999999999999999998787755544556555
Q ss_pred CchHHHHHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCCCC
Q 017643 290 SLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 290 DQd~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 368 (368)
.+++.|++|.|++++||++||+.++|++.... .+ ...+++||||+|+.|||...+.. +++++|++|..++++|
T Consensus 479 aLpp~LivF~gri~~LD~rWNvlglGy~~~i~--~~-~i~~paIIHYnG~~KPWle~~i~---~yr~~W~kYl~~~~~f 551 (559)
T PLN02523 479 TLPPGLITFYSTTKPLDKSWHVLGLGYNPSIS--MD-EIRNAAVIHFNGNMKPWLDIAMN---QFKPLWTKYVDYDMEF 551 (559)
T ss_pred ccchHHHHhcCceEecCchhhccCCccCCCcc--cc-ccCCCEEEEECCCCCccccCCCC---cchHHHHHHHccCCHH
Confidence 66666899999999999999999888743211 11 12578999999999999987653 4899999999999875
No 6
>PLN02742 Probable galacturonosyltransferase
Probab=100.00 E-value=1.6e-48 Score=390.39 Aligned_cols=274 Identities=28% Similarity=0.538 Sum_probs=225.9
Q ss_pred ccCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHH---HH-hhCCCcceEEEEeCh-hhhhhc
Q 017643 85 VCDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETL---VR-STFPQLKFKVYYFDP-EIVRNL 159 (368)
Q Consensus 85 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l---~~-~~f~~l~i~~~~~d~-~~~~~~ 159 (368)
.-|++..|.|+.+|+ +.+++|+|.|.+.|+.+|+++.|||+||..+...+ +. ..++...++++.++. ..+.+.
T Consensus 222 l~d~~l~Hy~ifSdN--vlAasvvvnStv~nsk~P~~~VFHiVTD~~n~~aM~~WF~~n~~~~a~v~V~n~e~f~wl~~~ 299 (534)
T PLN02742 222 LVDNNLYHFCVFSDN--ILATSVVVNSTVSNAKHPDQLVFHLVTDEVNYGAMQAWFAMNDFKGVTVEVQKIEEFSWLNAS 299 (534)
T ss_pred ccCCCcceEEEEecc--chhhhhhhhhhHhhhcCCCcEEEEEeechhhHHHHHHHHhhCCCCccEEEEEEeccccccccc
Confidence 348889999999997 67899999999999999999999999999875443 22 445667788887754 222111
Q ss_pred cc-------h-------------------hh-hhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccC
Q 017643 160 IS-------T-------------------SV-RQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLG 212 (368)
Q Consensus 160 is-------~-------------------~~-~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~ 212 (368)
.+ . .. +..+.++.+|+||+||+++| +++||||||+|+||++||++||++||+
T Consensus 300 ~~pvl~ql~~~~~~~~yf~~~~~~~~~~~k~r~p~y~s~~~y~R~~lP~llp-~l~KvlYLD~DvVV~~DL~eL~~~DL~ 378 (534)
T PLN02742 300 YVPVLKQLQDSDTQSYYFSGSQDDGKTEIKFRNPKYLSMLNHLRFYIPEIYP-ALEKVVFLDDDVVVQKDLTPLFSIDLH 378 (534)
T ss_pred cchHHHHhhhhhhhhhhcccccccccccccccCcccccHHHHHHHHHHHHhh-ccCeEEEEeCCEEecCChHHHhcCCCC
Confidence 00 0 00 13456789999999999999 499999999999999999999999999
Q ss_pred CCeeeeecccccccccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCch
Q 017643 213 SRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLP 292 (368)
Q Consensus 213 g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd 292 (368)
|+++|||+||..+|++|.+..+|+++.+...|. ++.||||+|||||||++||++++++.+..|++.+.+..+|.+|.++
T Consensus 379 ~~viaAVedC~~~f~ry~~yLnfS~p~i~~~f~-~~aC~fNsGV~ViDL~~WRe~nITe~~~~w~e~n~~~~l~d~gaLp 457 (534)
T PLN02742 379 GNVNGAVETCLETFHRYHKYLNFSHPLISSHFD-PDACGWAFGMNVFDLVAWRKANVTAIYHYWQEQNVDRTLWKLGTLP 457 (534)
T ss_pred CCEEEEeCchhhhhhhhhhhhcccchhhhccCC-CCccccccCcEEEeHHHHHhhcHHHHHHHHHHhccccccccccccc
Confidence 999999999988887777666788887776664 5789999999999999999999999888899877666788888899
Q ss_pred HHHHHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCCCC
Q 017643 293 PFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 293 ~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 368 (368)
+++++|+|++++||++||+.++|++.... +.. ..++.||||+|+.|||...+..+ +.++|++|.+++++|
T Consensus 458 p~LLaF~g~~~~LD~rWNv~gLG~~~~v~-~~~--i~~aaILHynG~~KPWl~~~i~~---yr~~W~kYl~~s~~f 527 (534)
T PLN02742 458 PGLLTFYGLTEPLDRRWHVLGLGYDTNID-PRL--IESAAVLHFNGNMKPWLKLAIER---YKPLWERYVNYSHPY 527 (534)
T ss_pred hHHHHHcCcceecChhheecccccccccc-hhh--ccCCeEEEECCCCCcccccCCcc---cchHHHHHHccCCHH
Confidence 99999999999999999999998753211 122 24779999999999999998643 789999999999876
No 7
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase
Probab=100.00 E-value=2.4e-47 Score=385.07 Aligned_cols=273 Identities=27% Similarity=0.521 Sum_probs=219.5
Q ss_pred cCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH----HhhCCCcceEEEEeCh------h-
Q 017643 86 CDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV----RSTFPQLKFKVYYFDP------E- 154 (368)
Q Consensus 86 ~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~----~~~f~~l~i~~~~~d~------~- 154 (368)
-|++..|.|+.+|+ +..++|++.|.+.|+..|+++.|||+||..+...+. ...+....+++..++. .
T Consensus 341 ~dp~l~Hy~ifSDN--VLAaSVVVnSTv~na~~P~k~VFHiVTD~~ny~aM~~WF~~n~~~~A~V~V~nie~f~wln~~~ 418 (657)
T PLN02910 341 EDPSLYHYAIFSDN--VLATSVVVNSTVLHAKEPQKHVFHIVTDKLNFAAMKMWFIINPPAKATIQVENIDDFKWLNSSY 418 (657)
T ss_pred cCCcceeEEEEecc--eeeEEeehhhhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEeehhhcccccccc
Confidence 47889999999997 568899999999999999999999999998754432 1222233444433321 0
Q ss_pred --hhhhccc----------------------hhhh-hhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhc
Q 017643 155 --IVRNLIS----------------------TSVR-QALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTT 209 (368)
Q Consensus 155 --~~~~~is----------------------~~~~-~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~ 209 (368)
.++.+-+ ...+ ..+.++++|+||+||++|| +++||||||+|+||++||++||++
T Consensus 419 ~pvl~qles~~~~~~yf~~~~~~~~~~~~~~~k~r~p~ylS~lnY~Rf~LPelLp-~l~KVLYLD~DVVV~gDLseLw~i 497 (657)
T PLN02910 419 CSVLRQLESARIKEYYFKANHPSSLSAGADNLKYRNPKYLSMLNHLRFYLPEVYP-KLEKILFLDDDIVVQKDLTPLWSI 497 (657)
T ss_pred cHHHHHHhhhhhhhhhhhccccccccccccccccCCcchhhHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCchHHHHhC
Confidence 0010000 0001 2346789999999999999 599999999999999999999999
Q ss_pred ccCCCeeeeecccccccccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCC
Q 017643 210 SLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELG 289 (368)
Q Consensus 210 dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~ 289 (368)
||+|+++|||++|..+|+.+.....|+++.+...|. .+.||||+|||||||++||+.++++.+..|++.+.+..+|.+|
T Consensus 498 DL~g~v~AAVedc~~~f~r~~~ylnfs~P~i~~yFN-s~aCyfNsGVmVIDL~~WRe~nITe~ye~w~eln~~~~L~dqg 576 (657)
T PLN02910 498 DMQGMVNGAVETCKESFHRFDKYLNFSNPKISENFD-PNACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRTLWKLG 576 (657)
T ss_pred CcCCceEEEecccchhhhhhhhhhccCChhhhhccC-CCCceeecccEEEeHHHHHHhhHHHHHHHHHHhcccccccccC
Confidence 999999999999988777766666777777766564 5789999999999999999999999888898877777788777
Q ss_pred CchHHHHHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCCCC
Q 017643 290 SLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 290 DQd~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 368 (368)
.++++.++|+|++++||++||++++|++.....+ ...+++||||+|+.|||...+.. +|+++|.+|..++++|
T Consensus 577 sLPpgLLvF~g~i~pLD~rWNv~GLGyd~~v~~~---~i~~AAVLHynG~~KPWl~l~i~---~Yr~~W~kYl~~d~~f 649 (657)
T PLN02910 577 SLPPGLITFYNLTYPLDRSWHVLGLGYDPALNQT---EIENAAVVHYNGNYKPWLDLAIA---KYKPYWSRYVQYDNPY 649 (657)
T ss_pred CCChHHHHHhCceeecCchheecCCCCCcccccc---cccCcEEEEeCCCCCcccccCcc---cchHHHHHHccCCChH
Confidence 8888889999999999999999999987554432 23568999999999999999874 4999999999999876
No 8
>PLN02870 Probable galacturonosyltransferase
Probab=100.00 E-value=7.5e-46 Score=370.47 Aligned_cols=270 Identities=26% Similarity=0.522 Sum_probs=205.1
Q ss_pred ccCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH----HhhCCCcceEEEEeCh------h
Q 017643 85 VCDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV----RSTFPQLKFKVYYFDP------E 154 (368)
Q Consensus 85 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~----~~~f~~l~i~~~~~d~------~ 154 (368)
.-|++..|.|+.+|+ +..++|.+.|.+.|+..|+++.|||+||..+...+. ...+....+++..++. +
T Consensus 201 l~dp~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VFHvvTD~~n~~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~ 278 (533)
T PLN02870 201 LSDNSYHHFVLSTDN--ILAASVVVSSTVQSSLKPEKIVFHVITDKKTYAGMHSWFALNSVSPAIVEVKGVHQFDWLTRE 278 (533)
T ss_pred ccCCcceeEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEehhhccccccc
Confidence 458889999999997 568899999999999999999999999998754332 1222233444433321 0
Q ss_pred h---h---hh------cc----------ch-----------hhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeec
Q 017643 155 I---V---RN------LI----------ST-----------SVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVD 201 (368)
Q Consensus 155 ~---~---~~------~i----------s~-----------~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~ 201 (368)
. + +. .+ +. ..+..+.++++|+||+||++|| +++||||||+|+||++
T Consensus 279 ~~pvl~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~lny~Rl~LPelLP-~LdKVLYLD~DVVVqg 357 (533)
T PLN02870 279 NVPVLEAVESHNGIRNYYHGNHIAGANLSETTPRTFASKLQARSPKYISLLNHLRIYLPELFP-NLDKVVFLDDDVVIQR 357 (533)
T ss_pred cchHHHHHhhhHHHHHHhhcccccccccccccchhhhcccccCCccccCHHHHHHHHHHHHhh-hcCeEEEEeCCEEecC
Confidence 0 0 00 00 00 0123456889999999999999 5999999999999999
Q ss_pred ChHHHHhcccCCCeeeeecccccc--------cccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHH
Q 017643 202 DIAKLWTTSLGSRTIGAPEYCHAN--------FSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRI 273 (368)
Q Consensus 202 DI~eL~~~dl~g~~iaAv~d~~~~--------f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki 273 (368)
||++||++||+|+++|||+||... +.+|++ ++++.+..++. ++.||||||||||||++||++++++++
T Consensus 358 DLseLw~iDL~gkviaAVeDc~~~~~~~~~~~~~~YfN---fs~p~i~~~fd-~~~cyfNSGVlLINL~~WRe~nITek~ 433 (533)
T PLN02870 358 DLSPLWDIDLGGKVNGAVETCRGEDEWVMSKRFRNYFN---FSHPLIAKNLD-PEECAWAYGMNIFDLRAWRKTNIRETY 433 (533)
T ss_pred cHHHHhhCCCCCceEEEEccccccchhhhhhhhhhhcc---cccchhhcccC-cccceeeccchhccHHHHHHcChHHHH
Confidence 999999999999999999998432 122332 45565555654 578999999999999999999999999
Q ss_pred HHHHHHccCCCccCCCCchHH---HHHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCC
Q 017643 274 ERWMEIQKSDRIYELGSLPPF---LLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRR 350 (368)
Q Consensus 274 ~~~~~~~~~~~l~~~~DQd~L---N~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~ 350 (368)
.+|++.+....+ .+.||++| |++|.|++++||++||+.++|++.. .. .+ ...+++||||+|+.|||+..+..
T Consensus 434 ~~~l~~n~~~~l-~l~DQdaLp~~livf~g~v~~LD~rWN~~gLgy~~~-~~-~~-~i~~aaIIHY~G~~KPW~~~~~~- 508 (533)
T PLN02870 434 HSWLKENLKSNL-TMWKLGTLPPALIAFKGHVHPIDPSWHMLGLGYQSK-TN-IE-SVKKAAVIHYNGQSKPWLEIGFE- 508 (533)
T ss_pred HHHHHhhhhcCc-eecccccccHhHHHhcCceEECChHHhcCCCCCccc-cc-cc-ccCCcEEEEECCCCCCccccCcc-
Confidence 999986533222 24577776 7899999999999999998886432 11 11 23578999999999999988764
Q ss_pred CCchhHhhHhhhhcCCCC
Q 017643 351 PCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 351 ~~~~~~lW~~Y~~~~~~~ 368 (368)
+++.+|.+|.+++++|
T Consensus 509 --~yr~~W~kYl~~s~~f 524 (533)
T PLN02870 509 --HLRPFWTKYVNYSNDF 524 (533)
T ss_pred --chhHHHHHHHccCchH
Confidence 3999999999999876
No 9
>PLN02659 Probable galacturonosyltransferase
Probab=100.00 E-value=1.8e-45 Score=367.83 Aligned_cols=273 Identities=23% Similarity=0.464 Sum_probs=203.0
Q ss_pred ccCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH----HhhCCCcceEEEEeCh------h
Q 017643 85 VCDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV----RSTFPQLKFKVYYFDP------E 154 (368)
Q Consensus 85 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~----~~~f~~l~i~~~~~d~------~ 154 (368)
.-|++..|.|+.+|+ +..++|++.|.+.|+..|+++.|||+||..+...+. ...+....+++..++. +
T Consensus 202 l~d~~l~Hy~ifSdN--vLAasVVvnStv~~a~~p~~~VFHivTD~~ny~aM~~WF~~n~~~~a~v~V~~~e~f~wl~~~ 279 (534)
T PLN02659 202 LVDNSYFHFVLASDN--ILAASVVANSLVQNALRPHKFVLHIITDRKTYSPMQAWFSLHPLSPAIIEVKALHHFDWFAKG 279 (534)
T ss_pred cCCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhccccccc
Confidence 457888999999997 568899999999999999999999999998754432 1223233444433321 0
Q ss_pred hh---hhc---------c--------ch-------------hhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeec
Q 017643 155 IV---RNL---------I--------ST-------------SVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVD 201 (368)
Q Consensus 155 ~~---~~~---------i--------s~-------------~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~ 201 (368)
.+ +.+ . +. ..+..+.|.++|+||+||++|| +++||||||+||||++
T Consensus 280 ~~pvl~ql~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~ylS~~nY~RL~IPeLLP-~LdKVLYLD~DVVVqg 358 (534)
T PLN02659 280 KVPVLEAMEKDQRVRSQFRGGSSAIVANNTEKPHVIAAKLQALSPKYNSVMNHIRIHLPELFP-SLNKVVFLDDDIVVQT 358 (534)
T ss_pred ccHHHHHHhhhhhhhhhhcccccccccccccCccccccccccCCccceeHHHHHHHHHHHHhh-hcCeEEEeeCCEEEcC
Confidence 00 000 0 00 0112345678999999999999 5999999999999999
Q ss_pred ChHHHHhcccCCCeeeeecccccc--c---ccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHH
Q 017643 202 DIAKLWTTSLGSRTIGAPEYCHAN--F---SKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERW 276 (368)
Q Consensus 202 DI~eL~~~dl~g~~iaAv~d~~~~--f---~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~ 276 (368)
||++||++||+|+++|||+||... + .++.....++++.+...| +.+.||||+|||||||++||++++++++++|
T Consensus 359 DLseLw~iDL~gkv~AAVeDc~~~d~~~~~~~~~~yL~~s~p~i~~yF-n~~~cYfNsGVlLINLk~WRe~nITek~l~~ 437 (534)
T PLN02659 359 DLSPLWDIDMNGKVNGAVETCRGEDKFVMSKKLKSYLNFSHPLIAKNF-DPNECAWAYGMNIFDLEAWRKTNISSTYHHW 437 (534)
T ss_pred chHHHHhCCCCCcEEEEeeccccccchhhhHHHHHhhcccchhhhhcc-CccccceecceeEeeHHHHHhcChHHHHHHH
Confidence 999999999999999999998532 1 111111113333333334 3468999999999999999999999999999
Q ss_pred HHHccCCCccCCCCchHH---HHHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCc
Q 017643 277 MEIQKSDRIYELGSLPPF---LLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCP 353 (368)
Q Consensus 277 ~~~~~~~~l~~~~DQd~L---N~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~ 353 (368)
++.+....+ .+.||++| |++|.|++++||++||+.++|++.-. . .+ ..++++||||+|+.|||...+.+ +
T Consensus 438 l~~n~~~~l-~l~DQdaLp~~LivF~g~v~~LD~rWN~~gLg~~~~~-~-~~-~i~~paIIHYnG~~KPW~~~~~~---~ 510 (534)
T PLN02659 438 LEENLKSDL-SLWQLGTLPPGLIAFHGHVHVIDPFWHMLGLGYQENT-S-LA-DAESAGVVHFNGRAKPWLDIAFP---Q 510 (534)
T ss_pred HHhcccccc-cccccccchHHHHHhcCCEEECChhheecCCcccccc-c-cc-ccCCcEEEEECCCCCccccccCC---c
Confidence 986543322 24577877 69999999999999999988864321 1 11 23578999999999999999864 5
Q ss_pred hhHhhHhhhhcCCCC
Q 017643 354 LDALWAPYDLYGHSH 368 (368)
Q Consensus 354 ~~~lW~~Y~~~~~~~ 368 (368)
++.+|.+|.+++++|
T Consensus 511 yr~~W~kYl~~s~~f 525 (534)
T PLN02659 511 LRPLWAKYIDSSDKF 525 (534)
T ss_pred chhHHHHHhccCCHH
Confidence 999999999999876
No 10
>PLN02769 Probable galacturonosyltransferase
Probab=100.00 E-value=3.6e-45 Score=372.03 Aligned_cols=267 Identities=24% Similarity=0.471 Sum_probs=203.8
Q ss_pred cCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHHH----hhCCCcceEEEEeCh---h----
Q 017643 86 CDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLVR----STFPQLKFKVYYFDP---E---- 154 (368)
Q Consensus 86 ~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~~----~~f~~l~i~~~~~d~---~---- 154 (368)
-|++..|.|+.+|+ +..++|+|.|.+.|+..|+++.|||+||..+...+.. ..+....+++..++. .
T Consensus 326 ~d~~l~Hy~ifSdN--vlAasvvvNStv~na~~p~~~VFHiVTD~~n~~am~~WF~~n~~~~a~v~v~n~e~~~~~~~~~ 403 (629)
T PLN02769 326 SDPSLRHYVIFSKN--VLAASVVINSTVVHSRESGNIVFHVLTDAQNYYAMKHWFDRNSYKEAAVQVLNIEDLILKDLDK 403 (629)
T ss_pred cCCccceEEEEecc--ceeeeeehhhhhhhccCccceEEEEecChhhHHHHHHHHhcCCCccceEEEeeeeeeeecccch
Confidence 47889999999997 6789999999999999999999999999987554421 222232333332211 0
Q ss_pred -hhhhc--------------cc-hh-hhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeee
Q 017643 155 -IVRNL--------------IS-TS-VRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIG 217 (368)
Q Consensus 155 -~~~~~--------------is-~~-~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~ia 217 (368)
.++.+ .+ .. .+..+.++++|+||+||++|| +++||||||+|+||++||++||++||+|+++|
T Consensus 404 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~eyiS~~nh~RfyIPELLP-~LdKVLYLD~DVVVqgDLseLw~iDL~gkviA 482 (629)
T PLN02769 404 FALKQLSLPEEFRVSFRSVDNPSSKQMRTEYLSVFSHSHFLLPEIFK-KLKKVVVLDDDVVVQRDLSFLWNLDMGGKVNG 482 (629)
T ss_pred HHHHhhccchhhhhhhccCCCCchhccCcccccHHHHHHHHHHHHhh-hcCeEEEEeCCEEecCcHHHHhcCCCCCCeEE
Confidence 11110 00 01 133567789999999999999 59999999999999999999999999999999
Q ss_pred eecccccccccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccC--CCccCCCCchHHH
Q 017643 218 APEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKS--DRIYELGSLPPFL 295 (368)
Q Consensus 218 Av~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~--~~l~~~~DQd~LN 295 (368)
||++|...+..+.. |.+ ...| .++.||||+|||||||++||+.++++++.+|++.... ...+.+++|+++|
T Consensus 483 AVedc~~rl~~~~~---yl~---~~~F-~~~~CyFNSGVLLINL~~WRk~nITe~~~~~~~~~~~~~~~~~~~~~Lp~ln 555 (629)
T PLN02769 483 AVQFCGVRLGQLKN---YLG---DTNF-DTNSCAWMSGLNVIDLDKWRELDVTETYLKLLQKFSKDGEESLRAAALPASL 555 (629)
T ss_pred Eehhhhhhhhhhhh---hhc---ccCC-CccccccccCeeEeeHHHHHHhCHHHHHHHHHHHhhhcccccccccCcCHHH
Confidence 99998643322110 100 1122 3568999999999999999999999999999876433 2456678999999
Q ss_pred HHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcCCCC
Q 017643 296 LVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYGHSH 368 (368)
Q Consensus 296 ~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~~ 368 (368)
++|+|++++||++||++++|++.... .+. ..+++||||+|+.|||+..+.. +++++|++|..++++|
T Consensus 556 lvF~g~v~~LD~rWNv~gLG~~~~i~--~~~-i~~paIIHYnG~~KPW~e~~i~---~yr~~W~kYl~~~~~f 622 (629)
T PLN02769 556 LTFQDLIYPLDDRWVLSGLGHDYGID--EQA-IKKAAVLHYNGNMKPWLELGIP---KYKKYWKRFLNRDDRF 622 (629)
T ss_pred HHhcCeEEECCHHHcccccccccccc--ccc-cCCcEEEEECCCCCCccCCCCC---hHHHHHHHHhccCChH
Confidence 99999999999999999888743211 122 2578999999999999988653 5999999999999876
No 11
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis. The catalytic domain of LARGE is a putative glycosyltransferase. Mutations of LARGE in mouse and human cause dystroglycanopathies, a disease associated with hypoglycosylation of the membrane protein alpha-dystroglycan (alpha-DG) and consequent loss of extracellular ligand binding. LARGE needs to both physically interact with alpha-dystroglycan and function as a glycosyltransferase in order to stimulate alpha-dystroglycan hyperglycosylation. LARGE localizes to the Golgi apparatus and contains three conserved DxD motifs. While two of the motifs are indispensible for glycosylation function, one is important for localization of th eenzyme. LARGE was originally named because it covers approximately large trunck of genomic DNA, more than 600bp long. The predicted protein structure contains an N-terminal cytoplasmic domain, a transmembrane region, a coiled-coil
Probab=100.00 E-value=2.4e-44 Score=343.83 Aligned_cols=257 Identities=19% Similarity=0.321 Sum_probs=182.6
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHH---HHHh-hCCCcceEEEEeChhhhhhccchhhhh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLET---LVRS-TFPQLKFKVYYFDPEIVRNLISTSVRQ 166 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~---l~~~-~f~~l~i~~~~~d~~~~~~~is~~~~~ 166 (368)
+.||+|. .+|+++++|+|+||++|+. .+++|||++++.+.+. +.+. ...+.++.+|.++. ..+.++.. ..
T Consensus 3 ~~iv~~~-~~y~~~~~~~i~Sil~n~~--~~~~fhii~d~~s~~~~~~l~~~~~~~~~~i~f~~i~~--~~~~~~~~-~~ 76 (280)
T cd06431 3 VAIVCAG-YNASRDVVTLVKSVLFYRR--NPLHFHLITDEIARRILATLFQTWMVPAVEVSFYNAEE--LKSRVSWI-PN 76 (280)
T ss_pred EEEEEcc-CCcHHHHHHHHHHHHHcCC--CCEEEEEEECCcCHHHHHHHHHhccccCcEEEEEEhHH--hhhhhccC-cc
Confidence 5678888 9999999999999999985 5699999999987543 3321 22355778887742 11222110 11
Q ss_pred hhcCc-hhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhc--ccCC-Ceeeeeccccccccccccccccccccccc
Q 017643 167 ALEQP-LNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTT--SLGS-RTIGAPEYCHANFSKYFTATFWSDKRFSA 242 (368)
Q Consensus 167 ~~~s~-~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~--dl~g-~~iaAv~d~~~~f~~~~~~~~w~~~~l~~ 242 (368)
.+.+. .+|+||++|++||++++||||||||+||++||++||++ ++.+ .++||+++.. .++....|....
T Consensus 77 ~~~s~~y~y~RL~ip~llp~~~dkvLYLD~Diiv~~di~eL~~~~~~~~~~~~~a~v~~~~----~~~~~~~~~~~~--- 149 (280)
T cd06431 77 KHYSGIYGLMKLVLTEALPSDLEKVIVLDTDITFATDIAELWKIFHKFTGQQVLGLVENQS----DWYLGNLWKNHR--- 149 (280)
T ss_pred cchhhHHHHHHHHHHHhchhhcCEEEEEcCCEEEcCCHHHHHHHhhhcCCCcEEEEeccch----hhhhhhhhhccC---
Confidence 23333 37899999999997799999999999999999999998 6754 5777777532 122211111100
Q ss_pred ccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccC-CCccCCCCchHHHHHhccC---eeecccccccccCCCCC
Q 017643 243 TFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKS-DRIYELGSLPPFLLVFAGH---VAPIEHRWNQHGLGGDN 318 (368)
Q Consensus 243 ~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~-~~l~~~~DQd~LN~vf~g~---i~~L~~~wN~~~l~~~~ 318 (368)
.+.+ ...|||||||||||++||++++++++....+.... .....++|||+||++|.|+ ++.||++||++. +...
T Consensus 150 ~~~~-~~~yFNsGVmlinL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~DQDiLN~v~~~~~~~~~~L~~~wN~~~-~~~~ 227 (280)
T cd06431 150 PWPA-LGRGFNTGVILLDLDKLRKMKWESMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVYQLPCAWNVQL-SDHT 227 (280)
T ss_pred CCcc-cccceeeeeeeeeHHHHHhhCHHHHHHHHHHHHHhhcCCCCcCcHHHHHHHHcCCcceeEECCCcccccc-Cccc
Confidence 0011 12499999999999999999999998766654321 1113469999999999999 899999999984 2221
Q ss_pred cccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcC
Q 017643 319 VRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYG 365 (368)
Q Consensus 319 ~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 365 (368)
....+.. ...+|+||||+|+.|||...+.. ++++++|..|.+++
T Consensus 228 ~~~~~~~-~~~~p~IIHf~g~~KPW~~~~~~--~~~~~~~~~~~~~~ 271 (280)
T cd06431 228 RSEQCYR-DVSDLKVIHWNSPKKLRVKNKHV--EFFRNLYLTFLEYD 271 (280)
T ss_pred hHhHhhc-CcCCCEEEEeCCCCCCCCcCCCC--hHHHHHHHHHHhcC
Confidence 1112211 13578999999999999977542 46999999999886
No 12
>PLN02867 Probable galacturonosyltransferase
Probab=100.00 E-value=7.1e-45 Score=364.88 Aligned_cols=271 Identities=25% Similarity=0.512 Sum_probs=202.1
Q ss_pred ccCCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH----HhhCCCcceEEEEeCh-hh----
Q 017643 85 VCDPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV----RSTFPQLKFKVYYFDP-EI---- 155 (368)
Q Consensus 85 ~~~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~----~~~f~~l~i~~~~~d~-~~---- 155 (368)
.-|++..|.|+.+|+ +..++|.+.|.+.|+..|+++.|||+||..+...+. ...+....+++..++. +.
T Consensus 206 l~d~~~~Hy~ifSdN--vLAasVvvnStv~~a~~p~~~VfHvvTD~~ny~aM~~WF~~n~~~~a~v~V~~~~~f~wl~~~ 283 (535)
T PLN02867 206 LTDPSFHHVVLLTDN--VLAASVVISSTVQNAANPEKLVFHIVTDKKTYTPMHAWFAINSIKSAVVEVKGLHQYDWSQEV 283 (535)
T ss_pred ccCCCcceEEEEecc--eeEEEeeeehhhhcccCccceEEEEecCccccHHHHHHHhhCCCccceEEEEeehhccccccc
Confidence 348889999999997 568899999999999999999999999998754332 1222233444433321 00
Q ss_pred ---hhhccc----------------------------hhhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChH
Q 017643 156 ---VRNLIS----------------------------TSVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIA 204 (368)
Q Consensus 156 ---~~~~is----------------------------~~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~ 204 (368)
+...+. ...+..+.|.++|+||+||++|| +++||||||+|+||++||+
T Consensus 284 ~~~v~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pkylS~lnYlRflIPeLLP-~LdKVLYLD~DVVVqgDLs 362 (535)
T PLN02867 284 NVGVKEMLEIHRLIWSHYYQNLKESDFQFEGTHKRSLEALSPSCLSLLNHLRIYIPELFP-DLNKIVFLDDDVVVQHDLS 362 (535)
T ss_pred cccHHHHHHHhhhhhhhhhccccccccccccccccchhhcChhhhhHHHHHHHHHHHHhh-ccCeEEEecCCEEEcCchH
Confidence 000000 00123446789999999999999 5999999999999999999
Q ss_pred HHHhcccCCCeeeeeccccc--c------cccccccccccccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHH
Q 017643 205 KLWTTSLGSRTIGAPEYCHA--N------FSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERW 276 (368)
Q Consensus 205 eL~~~dl~g~~iaAv~d~~~--~------f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~ 276 (368)
+||++||+|+++|||.|... . +.+|+ .++++.+..++ .++.||||+|||||||++||+.++++++++|
T Consensus 363 eLwdiDL~gkviaAV~D~~c~~~~~~~~~~~~Yl---Nfsnp~i~~~~-~p~~cYFNSGVmLINL~~WRe~nITek~~~~ 438 (535)
T PLN02867 363 SLWELDLNGKVVGAVVDSWCGDNCCPGRKYKDYL---NFSHPLISSNL-DQERCAWLYGMNVFDLKAWRRTNITEAYHKW 438 (535)
T ss_pred HHHhCcCCCCeEEEEeccccccccccchhhhhhc---cccchhhhccC-CCCCcceecceeeeeHHHHHHhcHHHHHHHH
Confidence 99999999999999976321 1 12222 24455444444 3578999999999999999999999999999
Q ss_pred HHHccCCCccCCCCchHHH---HHhccCeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCc
Q 017643 277 MEIQKSDRIYELGSLPPFL---LVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCP 353 (368)
Q Consensus 277 ~~~~~~~~l~~~~DQd~LN---~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~ 353 (368)
++.+.... ..+.||+.|| ++|.|++++||++||+.++|++... ...+. ..+++||||+|+.|||+..+.+ +
T Consensus 439 Le~n~~~~-~~l~dqd~LN~~LlvF~g~v~~LD~rWNv~gLgy~~~~-~~~~~-i~~paIIHYnG~~KPW~e~~~~---~ 512 (535)
T PLN02867 439 LKLSLNSG-LQLWQPGALPPALLAFKGHVHPIDPSWHVAGLGSRPPE-VPREI-LESAAVLHFSGPAKPWLEIGFP---E 512 (535)
T ss_pred HHhchhcc-cccccccccchHHHHhcCcEEECChhhcccCCCccccc-chhhh-cCCcEEEEECCCCCcccccCCC---c
Confidence 99764321 2245777777 5999999999999999888764321 11122 2578999999999999999864 5
Q ss_pred hhHhhHhhhhcCCCC
Q 017643 354 LDALWAPYDLYGHSH 368 (368)
Q Consensus 354 ~~~lW~~Y~~~~~~~ 368 (368)
++++|.+|.+++++|
T Consensus 513 yR~~W~kyl~~~~~f 527 (535)
T PLN02867 513 VRSLWYRHVNFSDKF 527 (535)
T ss_pred hhHHHHHhcCccchH
Confidence 999999999998765
No 13
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=1.5e-43 Score=342.10 Aligned_cols=258 Identities=20% Similarity=0.295 Sum_probs=197.6
Q ss_pred ceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH---H--hhCCCcceEEEEeChhhhhhccchhh
Q 017643 90 LVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV---R--STFPQLKFKVYYFDPEIVRNLISTSV 164 (368)
Q Consensus 90 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~---~--~~f~~l~i~~~~~d~~~~~~~is~~~ 164 (368)
.++||+++|.||+.+++|+|+||+.|++. -.+.||+++++++.|... + +.|.. .+.++.+|.+.++..++.
T Consensus 2 ~~~Iv~a~D~nY~~~~gvsI~SiL~~n~~-~~~~fhil~~~i~~e~~~~l~~~~~~f~~-~i~~~~id~~~~~~~~~~-- 77 (325)
T COG1442 2 TIPIAFAFDKNYLIPAGVSIYSLLEHNRK-IFYKFHILVDGLNEEDKKKLNETAEPFKS-FIVLEVIDIEPFLDYPPF-- 77 (325)
T ss_pred cccEEEEcccccchhHHHHHHHHHHhCcc-ccEEEEEEecCCCHHHHHHHHHHHHhhcc-ceeeEEEechhhhccccc--
Confidence 58999999999999999999999999984 369999999999865432 2 44533 566777788877765521
Q ss_pred hhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeeccccccccccccccccccccccccc
Q 017643 165 RQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATF 244 (368)
Q Consensus 165 ~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~ 244 (368)
+.+++.++|+|+++++++|+ ++|+||||+||||+|||++||.++++++++|||.|+..... . +....+.-
T Consensus 78 -~~~~s~~v~~R~fiadlf~~-~dK~lylD~Dvi~~g~l~~lf~~~~~~~~~aaV~D~~~~~~---~-----~~~~~~~~ 147 (325)
T COG1442 78 -TKRFSKMVLVRYFLADLFPQ-YDKMLYLDVDVIFCGDLSELFFIDLEEYYLAAVRDVFSHYM---K-----EGALRLEK 147 (325)
T ss_pred -ccchHHHHHHHHHHHHhccc-cCeEEEEecCEEEcCcHHHHHhcCCCcceEEEEeehhhhhh---h-----hhhhHhhh
Confidence 24567899999999999996 69999999999999999999999999999999998643111 0 00011111
Q ss_pred CCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccCeeecccccccccCCCCCcccccc
Q 017643 245 NGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCR 324 (368)
Q Consensus 245 ~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~~~ 324 (368)
......|||||||++|+++||+++++++++++++..+ . .+..+|||+||++|.|++.+||.+||++..........+.
T Consensus 148 ~~~~~~yFNaG~llinl~~W~~~~i~~k~i~~~~~~~-~-~~~~~DQdiLN~i~~~~~~~L~~~YN~~~~~~~~~~~~~~ 225 (325)
T COG1442 148 GDLEGSYFNAGVLLINLKLWREENIFEKLIELLKDKE-N-DLLYPDQDILNMIFEDRVLELPIRYNAIPYIDSQLKDKYI 225 (325)
T ss_pred cccccccCccceeeehHHHHHHhhhHHHHHHHHhccc-c-ccCCccccHHHHHHHhhhhccCcccceeehhhhccchhhh
Confidence 1234679999999999999999999999999987544 2 3456899999999999999999999999533222222111
Q ss_pred cCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcC
Q 017643 325 NLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYG 365 (368)
Q Consensus 325 ~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 365 (368)
.....++.|+||+|+.|||+.....+++ ...|.......
T Consensus 226 ~~~~~~~~iiHy~g~~KPW~~~~~~~~~--~~~w~~i~~~~ 264 (325)
T COG1442 226 YPFGDDPVILHYAGPTKPWHSDSSNYPR--SHEWHEILAET 264 (325)
T ss_pred ccCCCCceEEEecCCCCCCcCccccccH--HHHHHHHHhcC
Confidence 1234578999999999999999876543 56666555443
No 14
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.
Probab=100.00 E-value=6.3e-43 Score=328.44 Aligned_cols=238 Identities=22% Similarity=0.335 Sum_probs=175.1
Q ss_pred eeEEEEeC-ccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHH--HHh--hCCCcceEEEEeChhhhhhccchhhh
Q 017643 91 VHVAITLD-VEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETL--VRS--TFPQLKFKVYYFDPEIVRNLISTSVR 165 (368)
Q Consensus 91 i~I~~~~D-~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l--~~~--~f~~l~i~~~~~d~~~~~~~is~~~~ 165 (368)
|||+++++ ++|+++++|+++||++|++. +++|||++++++.+.. +++ ...+.+++++.++........ ..
T Consensus 1 ~~i~~~a~d~~y~~~~~v~i~Sl~~~~~~--~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~~~~~~~~~~~---~~ 75 (246)
T cd00505 1 IAIVIVATGDEYLRGAIVLMKSVLRHRTK--PLRFHVLTNPLSDTFKAALDNLRKLYNFNYELIPVDILDSVDSE---HL 75 (246)
T ss_pred CeEEEEecCcchhHHHHHHHHHHHHhCCC--CeEEEEEEccccHHHHHHHHHHHhccCceEEEEeccccCcchhh---hh
Confidence 67876665 59999999999999999874 6999999999875322 221 122456778877643322111 11
Q ss_pred hhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccC
Q 017643 166 QALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFN 245 (368)
Q Consensus 166 ~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~ 245 (368)
..+.++.+|+||++|+++| +++||||||+|+||++||++||+++++++.+||++||...... ..+. ...+.
T Consensus 76 ~~~~~~~~y~RL~i~~llp-~~~kvlYLD~D~iv~~di~~L~~~~l~~~~~aav~d~~~~~~~----~~~~---~~~~~- 146 (246)
T cd00505 76 KRPIKIVTLTKLHLPNLVP-DYDKILYVDADILVLTDIDELWDTPLGGQELAAAPDPGDRREG----KYYR---QKRSH- 146 (246)
T ss_pred cCccccceeHHHHHHHHhh-ccCeEEEEcCCeeeccCHHHHhhccCCCCeEEEccCchhhhcc----chhh---cccCC-
Confidence 2356789999999999999 6999999999999999999999999999999999987532110 1111 11111
Q ss_pred CCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccC---eeecccccccccCCCCCcccc
Q 017643 246 GRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGH---VAPIEHRWNQHGLGGDNVRGS 322 (368)
Q Consensus 246 ~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~---i~~L~~~wN~~~l~~~~~~~~ 322 (368)
..+.+||||||||||+++||+++..+++.++...+.. ++ ..+|||+||.+|.++ +..||++||++..+.... ..
T Consensus 147 ~~~~~yfNsGVmlinl~~~r~~~~~~~~~~~~~~~~~-~~-~~~DQd~LN~~~~~~~~~i~~L~~~wN~~~~~~~~~-~~ 223 (246)
T cd00505 147 LAGPDYFNSGVFVVNLSKERRNQLLKVALEKWLQSLS-SL-SGGDQDLLNTFFKQVPFIVKSLPCIWNVRLTGCYRS-LN 223 (246)
T ss_pred CCCCCceeeeeEEEechHHHHHHHHHHHHHHHHhhcc-cC-ccCCcHHHHHHHhcCCCeEEECCCeeeEEecCcccc-cc
Confidence 1345799999999999999988888887776664332 23 468999999999998 999999999985443221 11
Q ss_pred cccCCCCCcEEEeCCCCCCCCcc
Q 017643 323 CRNLHPGPVSLLHWSGSGKPWLR 345 (368)
Q Consensus 323 ~~~l~~~~~~IIHf~G~~KPW~~ 345 (368)
|......+++||||+|+.|||++
T Consensus 224 ~~~~~~~~~~iiHy~g~~KPW~~ 246 (246)
T cd00505 224 CFKAFVKNAKVIHFNGPTKPWNK 246 (246)
T ss_pred chhhhcCCCEEEEeCCCCCCCCC
Confidence 21112357899999999999974
No 15
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune sys
Probab=100.00 E-value=5.4e-43 Score=328.72 Aligned_cols=239 Identities=20% Similarity=0.275 Sum_probs=183.8
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHH--HHhhC--CCcceEEEEeChhhhhhccchhhhh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETL--VRSTF--PQLKFKVYYFDPEIVRNLISTSVRQ 166 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l--~~~~f--~~l~i~~~~~d~~~~~~~is~~~~~ 166 (368)
||||+|+|++|++++++++.|+++|++. ++++|||++++++.+.. +++.. ...+++++.++.+....... ..
T Consensus 1 ~~I~~~~d~~y~~~~~~~l~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~~~~i~~~~i~~~~~~~~~~---~~ 76 (248)
T cd04194 1 MNIVFAIDDNYAPYLAVTIKSILANNSK-RDYDFYILNDDISEENKKKLKELLKKYNSSIEFIKIDNDDFKFFPA---TT 76 (248)
T ss_pred CCEEEEecHhhHHHHHHHHHHHHhcCCC-CceEEEEEeCCCCHHHHHHHHHHHHhcCCeEEEEEcCHHHHhcCCc---cc
Confidence 6999999999999999999999999985 57999999998764432 22222 25578888887765543221 23
Q ss_pred hhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCC
Q 017643 167 ALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNG 246 (368)
Q Consensus 167 ~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~ 246 (368)
.+++..+|+||++++++| +++||||||+|+||++||++||+++++|+.+||+.|+....... + + .... ..
T Consensus 77 ~~~~~~~y~rl~l~~ll~-~~~rvlylD~D~lv~~di~~L~~~~~~~~~~aa~~d~~~~~~~~-----~-~--~~~~-~~ 146 (248)
T cd04194 77 DHISYATYYRLLIPDLLP-DYDKVLYLDADIIVLGDLSELFDIDLGDNLLAAVRDPFIEQEKK-----R-K--RRLG-GY 146 (248)
T ss_pred ccccHHHHHHHHHHHHhc-ccCEEEEEeCCEEecCCHHHHhcCCcCCCEEEEEecccHHHHHH-----H-H--hhcC-CC
Confidence 456778999999999999 69999999999999999999999999999999999875432110 0 0 0111 12
Q ss_pred CCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccCeeecccccccccCCCCCcccc----
Q 017643 247 RKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGS---- 322 (368)
Q Consensus 247 ~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~---- 322 (368)
....||||||||+|+++||+.+++++++++++.+.. .+..+||++||.+|.+++..||.+||++..........
T Consensus 147 ~~~~yfNsGv~l~nl~~~r~~~~~~~~~~~~~~~~~--~~~~~DQd~LN~~~~~~~~~L~~~~N~~~~~~~~~~~~~~~~ 224 (248)
T cd04194 147 DDGSYFNSGVLLINLKKWREENITEKLLELIKEYGG--RLIYPDQDILNAVLKDKILYLPPRYNFQTGFYYLLKKKSKEE 224 (248)
T ss_pred cccceeeecchheeHHHHHHhhhHHHHHHHHHhCCC--ceeeCChHHHHHHHhCCeEEcCcccccchhHhHHhhccchhH
Confidence 356799999999999999999999999999996542 24568999999999999999999999985332111000
Q ss_pred -cccCCCCCcEEEeCCCCCCCCcc
Q 017643 323 -CRNLHPGPVSLLHWSGSGKPWLR 345 (368)
Q Consensus 323 -~~~l~~~~~~IIHf~G~~KPW~~ 345 (368)
......++++||||+|+.|||+.
T Consensus 225 ~~~~~~~~~~~iiHf~g~~KPW~~ 248 (248)
T cd04194 225 QELEEARKNPVIIHYTGSDKPWNK 248 (248)
T ss_pred HHHHHHhcCCEEEEeCCCCCCCCC
Confidence 00112357899999999999973
No 16
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 8 GT8 from CAZY comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase (2.4.1.44 from EC), lipopolysaccharide glucosyltransferase 1 (2.4.1.58 from EC), glycogenin glucosyltransferase (2.4.1.186 from EC), inositol 1-alpha-galactosyltransferase (2.4.1.123 from EC). These enzymes have a distant similarity to family GT_24. ; GO: 0016757 transferase activity, transferring glycosyl groups; PDB: 1LL0_D 1ZCV_A 3USR_A 3V90_A 1ZCU_A 1ZCT_A 3V91_A 1ZCY_A 1ZDG_A 1ZDF_A ....
Probab=100.00 E-value=3e-40 Score=306.51 Aligned_cols=245 Identities=23% Similarity=0.429 Sum_probs=165.1
Q ss_pred eEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHH--HHhhCCCc-ceE-EEEeChhhhhhccchhhhhh
Q 017643 92 HVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETL--VRSTFPQL-KFK-VYYFDPEIVRNLISTSVRQA 167 (368)
Q Consensus 92 ~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l--~~~~f~~l-~i~-~~~~d~~~~~~~is~~~~~~ 167 (368)
||++++|++|+.+++|+++||++|++.+..+.||+++++.+.+.. +++..... .+. +...+...............
T Consensus 1 ~i~~~~d~~y~~~~~v~i~Sl~~~~~~~~~~~i~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (250)
T PF01501_consen 1 HIVLACDDNYLEGAAVLIKSLLKNNPDPSNLHIYIITDDISEEDFEKLRALAAEVIEIEPIEFPDISMLEEFQFNSPSKR 80 (250)
T ss_dssp -EEEECSGGGHHHHHHHHHHHHHTTTT-SSEEEEEEESSS-HHHHHHHHHHSCCCCTTECEEETSGGHHH--TTS-HCCT
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHhccccccceEEEecCCCCHHHHHHHhhhcccccceeeeccchHHhhhhhhhcccccc
Confidence 799999999999999999999999987678999999998875433 23333322 222 23333332221112223345
Q ss_pred hcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCCC
Q 017643 168 LEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGR 247 (368)
Q Consensus 168 ~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~ 247 (368)
+.++.+|+|++++++++ +++||||||+|++|.+||++||+++++|+.+||++++. +........+.. .... ..
T Consensus 81 ~~~~~~~~rl~i~~ll~-~~drilyLD~D~lv~~dl~~lf~~~~~~~~~~a~~~~~--~~~~~~~~~~~~---~~~~-~~ 153 (250)
T PF01501_consen 81 HFSPATFARLFIPDLLP-DYDRILYLDADTLVLGDLDELFDLDLQGKYLAAVEDES--FDNFPNKRFPFS---ERKQ-PG 153 (250)
T ss_dssp CGGGGGGGGGGHHHHST-TSSEEEEE-TTEEESS-SHHHHC---TTSSEEEEE------HHHHTSTTSSE---EECE-ST
T ss_pred cccHHHHHHhhhHHHHh-hcCeEEEEcCCeeeecChhhhhcccchhhhccccccch--hhhhhhcccchh---hccc-Cc
Confidence 66789999999999997 59999999999999999999999999999999998721 111111000100 0011 23
Q ss_pred CCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccCeeecccccccccCCCCCcccccccCC
Q 017643 248 KPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNVRGSCRNLH 327 (368)
Q Consensus 248 ~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~i~~L~~~wN~~~l~~~~~~~~~~~l~ 327 (368)
..+||||||||+|+++||++++.++++++++.+.. ....+||++||++|.++++.||.+||++..+. +....+....
T Consensus 154 ~~~~fNsGv~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~DQ~~ln~~~~~~~~~L~~~~N~~~~~~-~~~~~~~~~~ 230 (250)
T PF01501_consen 154 NKPYFNSGVMLFNPSKWRKENILQKLIEWLEQNGM--KLGFPDQDILNIVFYGNIKPLPCRYNCQPSWY-NQSDDYFNPI 230 (250)
T ss_dssp TTTSEEEEEEEEEHHHHHHHHHHHHHHHHHHHTTT--T-SSCHHHHHHHHHTTGEEEEEGGGSEEHHHH-HHTHHHHHHH
T ss_pred ccccccCcEEEEeechhhhhhhhhhhhhhhhhccc--ccCcCchHHHhhhccceeEEECchhccccccc-cccchhhHhh
Confidence 57899999999999999999999999999875433 34578999999999999999999999985332 0111111112
Q ss_pred CCCcEEEeCCCCCCCCccC
Q 017643 328 PGPVSLLHWSGSGKPWLRL 346 (368)
Q Consensus 328 ~~~~~IIHf~G~~KPW~~~ 346 (368)
..+++||||+|..|||...
T Consensus 231 ~~~~~iiHy~g~~KPW~~~ 249 (250)
T PF01501_consen 231 LEDAKIIHYSGPPKPWKST 249 (250)
T ss_dssp GCC-SEEE--SSS-TTSTT
T ss_pred cCCeEEEEeCCCCcCCCCC
Confidence 3578999999999999875
No 17
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities; lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
Probab=100.00 E-value=8.1e-37 Score=292.20 Aligned_cols=251 Identities=16% Similarity=0.274 Sum_probs=171.5
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCC-CH--HHHHHhh---CC-CcceEEEEeChhhhhhccchh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDT-NL--ETLVRST---FP-QLKFKVYYFDPEIVRNLISTS 163 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~-~~--~~l~~~~---f~-~l~i~~~~~d~~~~~~~is~~ 163 (368)
|||++.+-++++..+.++|+|++.|+. .+++|||++++. +. ++.+++. +. .+..+++.+. +...- .+
T Consensus 1 ~~~~vv~~g~~~~~~~~~lkSil~~n~--~~l~Fhi~~d~~~~~~~~~~l~~~~~~~~~~i~~~i~~I~---~P~~~-~~ 74 (304)
T cd06430 1 MHLAVVACGERLEETLTMLKSAIVFSQ--KPLRFHIFAEDQLKQSFKEKLDDWPELIDRKFNYTLHPIT---FPSGN-AA 74 (304)
T ss_pred CEEEEEEcCCcHHHHHHHHHHHHHhCC--CCEEEEEEECCccCHHHHHHHHHHHHhccceeeeEEEEEe---cCccc-hh
Confidence 566665555558999999999999985 579999999984 32 2223222 21 1223556552 11100 01
Q ss_pred hhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhc--ccCCC-eeeeeccccccccccccccccccccc
Q 017643 164 VRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTT--SLGSR-TIGAPEYCHANFSKYFTATFWSDKRF 240 (368)
Q Consensus 164 ~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~--dl~g~-~iaAv~d~~~~f~~~~~~~~w~~~~l 240 (368)
.+..+.+|.+|+||++|++|| +++||||||+|+||.+||++||++ ++++. ++|++++....- ..|.+...
T Consensus 75 ~ws~l~~~~~y~RL~ip~lLp-~~dkvLYLD~Dii~~~dI~eL~~~~~df~~~~~aA~v~e~~~~~------~~~~~~~~ 147 (304)
T cd06430 75 EWKKLFKPCAAQRLFLPSLLP-DVDSLLYVDTDILFLRPVEEIWSFLKKFNSTQLAAMAPEHEEPN------IGWYNRFA 147 (304)
T ss_pred hhhhcccHHHHHHHHHHHHhh-hhceEEEeccceeecCCHHHHHHHHhhcCCCeEEEEEecccccc------hhhhhhhc
Confidence 223456789999999999999 699999999999999999999999 88876 444444321100 01211111
Q ss_pred ccccCCCCCcccccceEEEecHHHHH-----------hhHHHHHHHHHHHccCCCccCCCCchHHHHHhccC---eeecc
Q 017643 241 SATFNGRKPCYFNTGVVVIDLVKWRR-----------VGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGH---VAPIE 306 (368)
Q Consensus 241 ~~~~~~~~~~yFNSGVmLidL~kwR~-----------~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~---i~~L~ 306 (368)
+..+. ...|||||||||||++||+ .++++++++++++.+ .++ .++|||+||++|.++ ++.||
T Consensus 148 ~~~~~--~~~gFNSGVmLmNL~~wR~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l-~~~DQDiLN~v~~~~p~~~~~Lp 223 (304)
T cd06430 148 RHPYY--GKTGVNSGVMLMNLTRMRRKYFKNDMTPVGLRWEEILMPLYKKYK-LKI-TWGDQDLINIIFHHNPEMLYVFP 223 (304)
T ss_pred ccCcc--cccccccceeeeeHHHHHhhhcccccchhhhhHHHHHHHHHHhcc-cCC-CCCCHHHHHHHHcCCCCeEEEcC
Confidence 11121 2357999999999999999 778999999998654 233 469999999999998 99999
Q ss_pred cccccccCCCCCc-ccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhhcC
Q 017643 307 HRWNQHGLGGDNV-RGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDLYG 365 (368)
Q Consensus 307 ~~wN~~~l~~~~~-~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~ 365 (368)
++||++.. ... ...|...+.+.++||||+++.| .. ..+ ..++.++.....|+
T Consensus 224 ~~wN~~~d--~~~y~~~~~~~~~~~~~~~H~n~~~~--~~--~~~-~~f~~~~~~~~~~~ 276 (304)
T cd06430 224 CHWNYRPD--HCMYGSNCKAAEEEGVFILHGNRGVY--HS--DKQ-PAFRAVYEAIREYT 276 (304)
T ss_pred ccccCCcc--ceeecccccccccccceEEEcCCCCC--CC--ccc-hHHHHHHHHHHhcc
Confidence 99998742 111 1224433446889999998766 32 223 35888888777665
No 18
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family. C-terminal domain of glycoprotein glucosyltransferase (UGT). UGT is a large glycoprotein whose C-terminus contains the catalytic activity. This catalytic C-terminal domain is highly homologous to Glycosyltransferase Family 8 (GT 8) and contains the DXD motif that coordinates donor sugar binding, characteristic for Family 8 glycosyltransferases. GT 8 proteins are retaining enzymes based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. The non-catalytic N-terminal portion of the human UTG1 (HUGT1) has been shown to monitor the protein folding status and activate its glucosyltransferase activity.
Probab=100.00 E-value=1.3e-36 Score=286.15 Aligned_cols=228 Identities=14% Similarity=0.227 Sum_probs=162.8
Q ss_pred eeEEEEe-CccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHH---HHH--hhCCCcceEEEEeCh-hhhhhccchh
Q 017643 91 VHVAITL-DVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLET---LVR--STFPQLKFKVYYFDP-EIVRNLISTS 163 (368)
Q Consensus 91 i~I~~~~-D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~---l~~--~~f~~l~i~~~~~d~-~~~~~~is~~ 163 (368)
|||+.+. |+.|+++++|++.||++|+. .+++|||++++++.+. +-+ +.+ +.+++++.++. ..+.......
T Consensus 1 ini~~~~~~~~y~~~~~v~l~Sll~nn~--~~~~fyil~~~is~e~~~~l~~~~~~~-~~~i~~i~i~~~~~~~~~~~~~ 77 (248)
T cd06432 1 INIFSVASGHLYERFLRIMMLSVMKNTK--SPVKFWFIKNFLSPQFKEFLPEMAKEY-GFEYELVTYKWPRWLHKQTEKQ 77 (248)
T ss_pred CeEEEEcCcHHHHHHHHHHHHHHHHcCC--CCEEEEEEeCCCCHHHHHHHHHHHHHh-CCceEEEEecChhhhhcccccc
Confidence 5677554 57899999999999999985 5799999999987543 222 334 34778888863 3222211110
Q ss_pred hhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccc-c
Q 017643 164 VRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFS-A 242 (368)
Q Consensus 164 ~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~-~ 242 (368)
....+|+|++++++||++++||||||+|+||.+||++||++||+|+++|||++|..... ......|.. .+. .
T Consensus 78 -----~~~~~y~rL~~~~lLP~~vdkvLYLD~Dilv~~dL~eL~~~dl~~~~~Aav~d~~~~~~-~~~~~~~~~-~~~~~ 150 (248)
T cd06432 78 -----RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRTDLKELMDMDLKGAPYGYTPFCDSRKE-MDGFRFWKQ-GYWKS 150 (248)
T ss_pred -----hhHHHHHHHHHHHhhhhccCEEEEEcCCceecccHHHHHhcCcCCCeEEEeeccccchh-cccchhhhh-hhhhh
Confidence 11357999999999998899999999999999999999999999999999998754210 000011211 110 0
Q ss_pred ccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHcc--CCCccCCCCchHHHHHhccC-eeecccccccccCCCCCc
Q 017643 243 TFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQK--SDRIYELGSLPPFLLVFAGH-VAPIEHRWNQHGLGGDNV 319 (368)
Q Consensus 243 ~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~--~~~l~~~~DQd~LN~vf~g~-i~~L~~~wN~~~l~~~~~ 319 (368)
.+ +...|||||||||||++||++++++++.++++... ..++ .++|||+||.++.++ ++.||++||++. +
T Consensus 151 ~l--~~~~YfNSGVmliNL~~wR~~~i~~~~~~~~~~l~~~~~~l-~~~DQDiLN~v~~~~~i~~Lp~~w~~~~-~---- 222 (248)
T cd06432 151 HL--RGRPYHISALYVVDLKRFRRIAAGDRLRGQYQQLSQDPNSL-ANLDQDLPNNMQHQVPIFSLPQEWLWCE-T---- 222 (248)
T ss_pred hc--CCCCccceeeEEEeHHHHHHHhHHHHHHHHHHHHhcCCCcc-ccCCchhhHHHhccCCeEECChHHHHHH-H----
Confidence 11 13459999999999999999999997777665321 2233 468999999999886 999999999982 1
Q ss_pred ccccccCCCCCcEEEeCCC
Q 017643 320 RGSCRNLHPGPVSLLHWSG 338 (368)
Q Consensus 320 ~~~~~~l~~~~~~IIHf~G 338 (368)
.|.+.....+.+|||+.
T Consensus 223 --~~~~~~~~~~~~~~~~~ 239 (248)
T cd06432 223 --WCSDESKKKAKTIDLCN 239 (248)
T ss_pred --HhcccccCccceeeccc
Confidence 12222235678999996
No 19
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
Probab=99.97 E-value=2.4e-30 Score=242.60 Aligned_cols=222 Identities=18% Similarity=0.243 Sum_probs=149.6
Q ss_pred EEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeC-CCCHHHH--HHhhCCCcceEEEEeChhhhhhccchhhhhhhcC
Q 017643 94 AITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVS-DTNLETL--VRSTFPQLKFKVYYFDPEIVRNLISTSVRQALEQ 170 (368)
Q Consensus 94 ~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~-~~~~~~l--~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~~~s 170 (368)
.+++|++|+.++.|+++||++|++. +.++++.+ +++.+.. +++.. .+++.++.-........ ......
T Consensus 5 t~~~~~~Y~~~a~vl~~SL~~~~~~---~~~~vl~~~~is~~~~~~L~~~~----~~~~~v~~i~~~~~~~~--~~~~~~ 75 (240)
T cd02537 5 TLLTNDDYLPGALVLGYSLRKVGSS---YDLVVLVTPGVSEESREALEEVG----WIVREVEPIDPPDSANL--LKRPRF 75 (240)
T ss_pred EEecChhHHHHHHHHHHHHHhcCCC---CCEEEEECCCCCHHHHHHHHHcC----CEEEecCccCCcchhhh--ccchHH
Confidence 4667889999999999999999863 56676665 4654432 33222 22333221110100000 011233
Q ss_pred chhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCCCCCc
Q 017643 171 PLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPC 250 (368)
Q Consensus 171 ~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~ 250 (368)
..+|.|++++++.+ ++||||||+|++|++||++||++ +..+||+.++. | ..
T Consensus 76 ~~~~~kl~~~~l~~--~drvlylD~D~~v~~~i~~Lf~~---~~~~~a~~d~~-----------~-------------~~ 126 (240)
T cd02537 76 KDTYTKLRLWNLTE--YDKVVFLDADTLVLRNIDELFDL---PGEFAAAPDCG-----------W-------------PD 126 (240)
T ss_pred HHHhHHHHhccccc--cceEEEEeCCeeEccCHHHHhCC---CCceeeecccC-----------c-------------cc
Confidence 46899999999753 89999999999999999999987 45677765431 0 25
Q ss_pred ccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccC--eeecccccccccCCCCCcccccccCCC
Q 017643 251 YFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGH--VAPIEHRWNQHGLGGDNVRGSCRNLHP 328 (368)
Q Consensus 251 yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~--i~~L~~~wN~~~l~~~~~~~~~~~l~~ 328 (368)
|||||||++++++ ...+++++++.... . +..+||++||.+|.++ +..||++||++......... +.. ..
T Consensus 127 ~fNsGv~l~~~~~----~~~~~~~~~~~~~~--~-~~~~DQdiLN~~~~~~~~~~~l~~~yN~~~~~~~~~~~-~~~-~~ 197 (240)
T cd02537 127 LFNSGVFVLKPSE----ETFNDLLDALQDTP--S-FDGGDQGLLNSYFSDRGIWKRLPFTYNALKPLRYLHPE-ALW-FG 197 (240)
T ss_pred cccceEEEEcCCH----HHHHHHHHHHhccC--C-CCCCCHHHHHHHHcCCCCEeECCcceeeehhhhccCch-hhc-cc
Confidence 9999999999964 45567777777433 2 4568999999999999 99999999998432221111 001 12
Q ss_pred CCcEEEeCCCCCCCCccCCCCCC------CchhHhhHhhh
Q 017643 329 GPVSLLHWSGSGKPWLRLDSRRP------CPLDALWAPYD 362 (368)
Q Consensus 329 ~~~~IIHf~G~~KPW~~~~~~~~------~~~~~lW~~Y~ 362 (368)
.+++||||+|+.|||+.....+. ..+...||...
T Consensus 198 ~~~~iiHf~g~~KPW~~~~~~~~~~~~~~~~~~~~w~~~~ 237 (240)
T cd02537 198 DEIKVVHFIGGDKPWSWWRDPETKEKDDYNELHQWWWDIY 237 (240)
T ss_pred CCcEEEEEeCCCCCCCCCcCCCcccccchHHHHHHHHHHH
Confidence 57899999999999998776533 23555666543
No 20
>PLN00176 galactinol synthase
Probab=99.97 E-value=3.6e-29 Score=242.79 Aligned_cols=236 Identities=17% Similarity=0.206 Sum_probs=147.5
Q ss_pred CceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEE-eCCCCHH--HHHHhhCCCcceEEEEeChhhhhhccchhhh
Q 017643 89 SLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFL-VSDTNLE--TLVRSTFPQLKFKVYYFDPEIVRNLISTSVR 165 (368)
Q Consensus 89 ~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl-~~~~~~~--~l~~~~f~~l~i~~~~~d~~~~~~~is~~~~ 165 (368)
...-.++++|++|+.|+.++.+||.++.+. ..++++ +++++.+ +.+++.. ..+..++.-..... .....
T Consensus 23 ~AyVT~L~~n~~Y~~Ga~vL~~SLr~~~s~---~~lVvlVt~dVp~e~r~~L~~~g----~~V~~V~~i~~~~~-~~~~~ 94 (333)
T PLN00176 23 RAYVTFLAGNGDYVKGVVGLAKGLRKVKSA---YPLVVAVLPDVPEEHRRILVSQG----CIVREIEPVYPPEN-QTQFA 94 (333)
T ss_pred eEEEEEEecCcchHHHHHHHHHHHHHhCCC---CCEEEEECCCCCHHHHHHHHHcC----CEEEEecccCCccc-ccccc
Confidence 345556788999999999999999988652 445554 4555543 2333222 22333322100000 00000
Q ss_pred hhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeeccccccccccccccccc-----cc-c
Q 017643 166 QALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWS-----DK-R 239 (368)
Q Consensus 166 ~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~-----~~-~ 239 (368)
.. ....+|.||.++++.. ++||||||+|+||.++|++||+++ .+ .+|||.||.++...-..+..|- .+ .
T Consensus 95 ~~-~~~i~~tKl~iw~l~~--ydkvlyLDaD~lv~~nid~Lf~~~-~~-~~aAV~dc~~~~~~~~~p~~~~~~c~~~~~~ 169 (333)
T PLN00176 95 MA-YYVINYSKLRIWEFVE--YSKMIYLDGDIQVFENIDHLFDLP-DG-YFYAVMDCFCEKTWSHTPQYKIGYCQQCPDK 169 (333)
T ss_pred cc-hhhhhhhhhhhccccc--cceEEEecCCEEeecChHHHhcCC-Cc-ceEEEecccccccccccccccccccccchhh
Confidence 00 1135789999999884 899999999999999999999884 23 5788888755321000000000 00 0
Q ss_pred cc--cccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccCeeecccccccccCCCC
Q 017643 240 FS--ATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGD 317 (368)
Q Consensus 240 l~--~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~i~~L~~~wN~~~l~~~ 317 (368)
+. .....+...||||||||+|+++|+.+++ +++++.... ..++|||+||.+|.+++++||.+||.+..-..
T Consensus 170 ~~wp~~~g~~~~~yFNSGVlvinps~~~~~~l----l~~l~~~~~---~~f~DQD~LN~~F~~~~~~Lp~~YN~~~~~~~ 242 (333)
T PLN00176 170 VTWPAELGPPPPLYFNAGMFVFEPSLSTYEDL----LETLKITPP---TPFAEQDFLNMFFRDIYKPIPPVYNLVLAMLW 242 (333)
T ss_pred ccchhhccCCCCCeEEeEEEEEEcCHHHHHHH----HHHHHhcCC---CCCCCHHHHHHHHcCcEEECCchhcCchhhhh
Confidence 00 0011124579999999999999987554 455654322 24689999999999999999999999831111
Q ss_pred CcccccccCCCCCcEEEeCCC-CCCCCccCC
Q 017643 318 NVRGSCRNLHPGPVSLLHWSG-SGKPWLRLD 347 (368)
Q Consensus 318 ~~~~~~~~l~~~~~~IIHf~G-~~KPW~~~~ 347 (368)
...+ . ...++++||||+| ..|||+..+
T Consensus 243 ~~~~-~--~~~~~vkIIHY~~~~~KPW~~~~ 270 (333)
T PLN00176 243 RHPE-N--VELDKVKVVHYCAAGSKPWRYTG 270 (333)
T ss_pred hChh-h--cccCCcEEEEeeCCCCCCCCCCC
Confidence 1111 1 1235789999997 579998764
No 21
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases.
Probab=99.91 E-value=1.5e-23 Score=199.33 Aligned_cols=208 Identities=17% Similarity=0.126 Sum_probs=140.9
Q ss_pred EEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCC-CHH---HHHH--hhCCCcceEEEEeChhhhhhccchhhhhh
Q 017643 94 AITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDT-NLE---TLVR--STFPQLKFKVYYFDPEIVRNLISTSVRQA 167 (368)
Q Consensus 94 ~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~-~~~---~l~~--~~f~~l~i~~~~~d~~~~~~~is~~~~~~ 167 (368)
-++++..|+.++.++.+||.++.+. ....++.++. +.. ++.+ ......++.+..++.....+ . ..
T Consensus 5 tl~Tn~~YL~gAlvL~~sLr~~gs~---~dlVvLvt~~~~~~~~~~~~~~~~~l~~~~~~v~~v~~~~~~~--~----~~ 75 (278)
T cd06914 5 NYATNADYLCNALILFEQLRRLGSK---AKLVLLVPETLLDRNLDDFVRRDLLLARDKVIVKLIPVIIASG--G----DA 75 (278)
T ss_pred EEecChhHHHHHHHHHHHHHHhCCC---CCEEEEECCCCChhhhhhHHHHHHHhhccCcEEEEcCcccCCC--C----Cc
Confidence 4567899999999999999998773 5666665553 321 1111 01112234444444221111 0 01
Q ss_pred hcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCCC
Q 017643 168 LEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGR 247 (368)
Q Consensus 168 ~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~ 247 (368)
.++ .+|.||.++++. .++||||||+|++|++++++||+++.. ..+|||..
T Consensus 76 ~~~-~~~tKl~~~~l~--~y~kvlyLDaD~l~~~~ideLf~~~~~-~~~Aap~~-------------------------- 125 (278)
T cd06914 76 YWA-KSLTKLRAFNQT--EYDRIIYFDSDSIIRHPMDELFFLPNY-IKFAAPRA-------------------------- 125 (278)
T ss_pred cHH-HHHHHHHhcccc--ceeeEEEecCChhhhcChHHHhcCCcc-cceeeecC--------------------------
Confidence 122 369999999994 499999999999999999999998733 34666531
Q ss_pred CCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccC-------eeecccc-cccccCCCCC-
Q 017643 248 KPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGH-------VAPIEHR-WNQHGLGGDN- 318 (368)
Q Consensus 248 ~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~-------i~~L~~~-wN~~~l~~~~- 318 (368)
..|||||||||++++|+.+++.+++.+....+. ..+|||+||.+|.|+ +..||++ ||........
T Consensus 126 -~~~FNSGvmvi~ps~~~~~~l~~~~~~~~~~~~-----~~~DQdiLN~~~~~~~~~~~~~~~~Lp~~~y~llt~~~r~~ 199 (278)
T cd06914 126 -YWKFASHLMVIKPSKEAFKELMTEILPAYLNKK-----NEYDMDLINEEFYNSKQLFKPSVLVLPHRQYGLLTGEFREK 199 (278)
T ss_pred -cceecceeEEEeCCHHHHHHHHHHHHHhcccCC-----CCCChHHHHHHHhCCccccCcceEEcCccccccCChhhccc
Confidence 129999999999999999999988877654211 347999999999999 9999997 9987321111
Q ss_pred ----cccc----cccC----CCCCcEEEeCCCC--CCCCccC
Q 017643 319 ----VRGS----CRNL----HPGPVSLLHWSGS--GKPWLRL 346 (368)
Q Consensus 319 ----~~~~----~~~l----~~~~~~IIHf~G~--~KPW~~~ 346 (368)
+.+. .... .-.++++|||+.. +|||...
T Consensus 200 ~~~~~l~~~~~~~~~w~~~~~~~~~k~vHFSd~Pl~KPW~~~ 241 (278)
T cd06914 200 LHKSFLSNAQHLYEKWDPDDVFKESKVIHFSDSPLPKPWNYN 241 (278)
T ss_pred CHHHhhccccccccccCHHHHHhhCeEEEecCCCCCCCcCCc
Confidence 0011 0000 0147899999996 7999876
No 22
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism]
Probab=99.33 E-value=2.6e-12 Score=138.46 Aligned_cols=252 Identities=16% Similarity=0.322 Sum_probs=161.1
Q ss_pred CCCceeEEEEeC-ccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHH---HhhCCCcceEEEEeC-hhhhhhc
Q 017643 87 DPSLVHVAITLD-VEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLV---RSTFPQLKFKVYYFD-PEIVRNL 159 (368)
Q Consensus 87 ~~~~i~I~~~~D-~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~---~~~f~~l~i~~~~~d-~~~~~~~ 159 (368)
+.+.|||+-... .-|-|.+..+|.|+++|+..| +.|.++-+.++.. +.+ .+.+ +.++++.... +..+...
T Consensus 1178 ~~~vINIFSvASGHLYERflrIMm~SvlknTktp--VKFWfLkNyLSPtFKe~iP~mA~eY-nFeyElv~YkWPrWLhqQ 1254 (1470)
T KOG1879|consen 1178 DKEVINIFSVASGHLYERFLRIMMLSVLKNTKTP--VKFWFLKNYLSPTFKESIPHMAKEY-NFEYELVQYKWPRWLHQQ 1254 (1470)
T ss_pred ccceEEEEeeccccHHHHHHHHHHHHHHhCCCCc--eeEEeehhhcChHHHHHHHHHHHHh-CceEEEEEecCchhhhhh
Confidence 456899996655 569999999999999999854 9999999887632 221 1222 1123332221 1222211
Q ss_pred cchhhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccc----cccccccc
Q 017643 160 ISTSVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFS----KYFTATFW 235 (368)
Q Consensus 160 is~~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~----~~~~~~~w 235 (368)
- .+. .-...|-=|||.=|||-+++||||+|+|-||+.|+.||.+.|++|++.|-+.-|..+-. ++...++|
T Consensus 1255 ~-EKQ----RiiWgyKILFLDVLFPL~v~KvIfVDADQIVR~DL~EL~dfdl~GaPygYtPfCdsR~EMDGyRFWK~GYW 1329 (1470)
T KOG1879|consen 1255 T-EKQ----RIIWGYKILFLDVLFPLNVDKVIFVDADQIVRADLKELMDFDLGGAPYGYTPFCDSRREMDGYRFWKQGYW 1329 (1470)
T ss_pred h-hhh----hhhhhhhhhhhhhccccccceEEEEcchHhhhhhhHHHHhcccCCCccccCccccccccccchhHHhhhHH
Confidence 0 111 11346777789888999999999999999999999999999999999998777754210 11123344
Q ss_pred cccccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHH--ccCCCccCCCCchHHHHHh-ccCeeecccccccc
Q 017643 236 SDKRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEI--QKSDRIYELGSLPPFLLVF-AGHVAPIEHRWNQH 312 (368)
Q Consensus 236 ~~~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~--~~~~~l~~~~DQd~LN~vf-~g~i~~L~~~wN~~ 312 (368)
+++ + ++..|--|...|+||+|.|+-.-.+++.-.-.. +....+..+ |||+=|-+. .-.|+.||..|=++
T Consensus 1330 ~~h-L------~grkYHISALYVVDLkrFReiaAGDrLR~qYQ~LS~DPNSLsNL-DQDLPNnm~hqVpIkSLPqeWLWC 1401 (1470)
T KOG1879|consen 1330 KKH-L------RGRKYHISALYVVDLKRFREIAAGDRLRGQYQALSQDPNSLSNL-DQDLPNNMQHQVPIKSLPQEWLWC 1401 (1470)
T ss_pred HHH-h------ccCccccceeeeeeHHHHHhcccchHHHHHHHhhcCCcchhhhc-cccccccceeecccccCCcchhhh
Confidence 432 1 234688899999999999998877776432221 111234443 688766554 44799999998665
Q ss_pred cCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCC-CCCCchhHhhHhhhh
Q 017643 313 GLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDS-RRPCPLDALWAPYDL 363 (368)
Q Consensus 313 ~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~-~~~~~~~~lW~~Y~~ 363 (368)
.. .|.+-....+++|--|. -||....- ......-.-|..|+.
T Consensus 1402 ET-------WC~d~skkkAktIDLCn--NP~TKEpKL~~A~Riv~EW~dyD~ 1444 (1470)
T KOG1879|consen 1402 ET-------WCDDESKKKAKTIDLCN--NPLTKEPKLDAARRIVSEWTDYDA 1444 (1470)
T ss_pred hh-------hcCchhhhhchhhhhhc--CccccchhhHHHhhhcCCCcccch
Confidence 21 23333334667777774 47765411 111124556777764
No 23
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=98.81 E-value=2.3e-09 Score=101.44 Aligned_cols=167 Identities=23% Similarity=0.336 Sum_probs=100.2
Q ss_pred hhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccc---ccccc------c-cc----------
Q 017643 172 LNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCH---ANFSK------Y-FT---------- 231 (368)
Q Consensus 172 ~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~---~~f~~------~-~~---------- 231 (368)
..+.++.+.+... +|||||||+|.||+.++++||+++ -+-.+|..|.. +.|++ + ++
T Consensus 155 ~mftKLrVfeqtE--yDRvifLDsDaivlknmDklFd~P--vyef~a~pD~~~sp~~fhrp~~~i~~~ft~~faayg~~r 230 (368)
T COG5597 155 DMFTKLRVFEQTE--YDRVIFLDSDAIVLKNMDKLFDYP--VYEFAAAPDVYESPADFHRPNSGIFVSFTPAFAAYGKMR 230 (368)
T ss_pred HHhHHHHhhhhhh--hceEEEeccchHHhhhhHHHhcch--hhhhccCCchhhCHHHhcCCCCccceeecHHHHhhcccH
Confidence 5778888889884 899999999999999999999866 12222221110 01111 0 11
Q ss_pred ------cccccc--cccccccCCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccC---CCCchHHHHHhcc
Q 017643 232 ------ATFWSD--KRFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYE---LGSLPPFLLVFAG 300 (368)
Q Consensus 232 ------~~~w~~--~~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~---~~DQd~LN~vf~g 300 (368)
..+|.+ +.+.......-..+||||.||++..++.-.. +...+ .+ .+|. .-.|.++|+..+.
T Consensus 231 ~~ly~Pylf~a~~dq~~~hstpP~fk~~FnagLmv~~Psk~hm~r----iv~~a--lP--klydda~mmeqsllnlaYn~ 302 (368)
T COG5597 231 AALYAPYLFWARTDQTFLHSTPPDFKLKFNAGLMVGLPSKMHMLR----IVWFA--LP--KLYDDADMMEQSLLNLAYNY 302 (368)
T ss_pred hhhccccccccccCCcccccCCCcHhhhhccCceeecchHHHHHH----HHHHh--hH--HhhhhhhHHHHHHHHHHHhh
Confidence 112221 1111111122346899999999998875433 33222 12 2442 1147788887643
Q ss_pred ----CeeecccccccccCCCCCcccccccCCCCCcEEEeCCCCCCCCccCCCCCCCchhHhhHhhhh
Q 017643 301 ----HVAPIEHRWNQHGLGGDNVRGSCRNLHPGPVSLLHWSGSGKPWLRLDSRRPCPLDALWAPYDL 363 (368)
Q Consensus 301 ----~i~~L~~~wN~~~l~~~~~~~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~ 363 (368)
-|..++.+|| |+-... .++ | -.+.+|+ |||...+...||.....|++=..
T Consensus 303 ~g~FPwerld~~yN----G~wa~~---ndl-P-ylka~Hg----K~W~y~g~~fp~i~~~ew~~daf 356 (368)
T COG5597 303 EGFFPWERLDPRYN----GYWADA---NDL-P-YLKAWHG----KPWFYTGEQFPDIAGLEWPQDAF 356 (368)
T ss_pred hccCchhhcCcccc----cccccc---ccc-c-hHHHhhc----CcCCCCcccChhhhcCcChhhhh
Confidence 5788999998 221110 011 1 2345564 99999999999999999995443
No 24
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [].
Probab=97.37 E-value=0.00084 Score=61.34 Aligned_cols=138 Identities=17% Similarity=0.122 Sum_probs=75.1
Q ss_pred hhHHHh-hhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCCCCCcc
Q 017643 173 NYARNY-LADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCY 251 (368)
Q Consensus 173 ~y~Rl~-l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~y 251 (368)
...|.- +.++|... --|+|+|+|++..+|..++++. .+.-+.+..|+.... .. ......
T Consensus 52 ~~~K~~~~~~~L~~G-~~vl~~D~Dvv~~~dp~~~~~~--~~~Di~~~~d~~~~~------------~~-----~~~~~~ 111 (212)
T PF03407_consen 52 TWLKPKVLLDLLELG-YDVLFSDADVVWLRDPLPYFEN--PDADILFSSDGWDGT------------NS-----DRNGNL 111 (212)
T ss_pred HHHHHHHHHHHHHcC-CceEEecCCEEEecCcHHhhcc--CCCceEEecCCCccc------------ch-----hhcCCc
Confidence 444442 55677654 4599999999999999999821 333343333432110 00 012235
Q ss_pred cccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccC--------eeecccccccccCCCCCccc--
Q 017643 252 FNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGH--------VAPIEHRWNQHGLGGDNVRG-- 321 (368)
Q Consensus 252 FNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~--------i~~L~~~wN~~~l~~~~~~~-- 321 (368)
+|+|+|.+.-..- ..+-+.+|++..... -...||.+||.++.+. +..||...-..+.++ +..
T Consensus 112 ~n~G~~~~r~t~~----~~~~~~~w~~~~~~~--~~~~DQ~~~n~~l~~~~~~~~~~~~~~L~~~~f~~g~~~--f~~~~ 183 (212)
T PF03407_consen 112 VNTGFYYFRPTPR----TIAFLEDWLERMAES--PGCWDQQAFNELLREQAARYGGLRVRFLPPSLFPNGHGY--FCQSR 183 (212)
T ss_pred cccceEEEecCHH----HHHHHHHHHHHHHhC--CCcchHHHHHHHHHhcccCCcCcEEEEeCHHHeeccccc--eeecc
Confidence 6999999965431 112234454433221 1224999999988663 566666543222111 111
Q ss_pred ccccCC-CCCcEEEeCCC
Q 017643 322 SCRNLH-PGPVSLLHWSG 338 (368)
Q Consensus 322 ~~~~l~-~~~~~IIHf~G 338 (368)
...... ..++.++|.++
T Consensus 184 ~~~~~~~~~~p~~vH~n~ 201 (212)
T PF03407_consen 184 DWAWVPTKNKPYIVHANC 201 (212)
T ss_pred hhhhhccccccceEEEcC
Confidence 111121 24678999996
No 25
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose. It is implicated in late Golgi modifications [][][]. The proteins matching this entry are conserved in fungi and also found in some phototrophic organisms.; GO: 0006486 protein glycosylation
Probab=96.62 E-value=0.005 Score=58.94 Aligned_cols=110 Identities=19% Similarity=0.216 Sum_probs=62.2
Q ss_pred EEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEe-CCCCHHHHHHhhCCCcceEEEEeChhhhhhccchhhhhhhcCc
Q 017643 93 VAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLV-SDTNLETLVRSTFPQLKFKVYYFDPEIVRNLISTSVRQALEQP 171 (368)
Q Consensus 93 I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~-~~~~~~~l~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~~~s~ 171 (368)
||++.-+.++..+..+|..|.+. .|.-++.|.... ++.+.+ ......+.-++.++....-...+...... ..
T Consensus 4 IVi~~g~~~~~~a~~lI~~LR~~-g~~LPIEI~~~~~~dl~~~-~~~~l~~~q~v~~vd~~~~~~~~~~~~~~-----~~ 76 (271)
T PF11051_consen 4 IVITAGDKYLWLALRLIRVLRRL-GNTLPIEIIYPGDDDLSKE-FCEKLLPDQDVWFVDASCVIDPDYLGKSF-----SK 76 (271)
T ss_pred EEEEecCccHHHHHHHHHHHHHh-CCCCCEEEEeCCccccCHH-HHHHHhhhhhhheecceEEeecccccccc-----cc
Confidence 78888889999999999999884 444455555444 333322 11111121122222211111111111101 00
Q ss_pred hhhHHHhhhhhhccccCcEEEEecceeeecChHHHHhcc
Q 017643 172 LNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWTTS 210 (368)
Q Consensus 172 ~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~d 210 (368)
..|..=.++-++. ..+.||+||+|+|...|++.||+.+
T Consensus 77 ~~~~~K~lA~l~s-sFeevllLDaD~vpl~~p~~lF~~~ 114 (271)
T PF11051_consen 77 KGFQNKWLALLFS-SFEEVLLLDADNVPLVDPEKLFESE 114 (271)
T ss_pred CCchhhhhhhhhC-CcceEEEEcCCcccccCHHHHhcCc
Confidence 1344334556665 5999999999999999999999865
No 26
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional
Probab=95.18 E-value=0.04 Score=55.08 Aligned_cols=140 Identities=19% Similarity=0.312 Sum_probs=76.5
Q ss_pred hccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCCCCCcccccceEEEecH
Q 017643 183 LEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLV 262 (368)
Q Consensus 183 lp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~ 262 (368)
.|+ ++-+-|||+|++|.+-- ++++++.+ ++.+...+ .|...- +..++-...|+||++|-..
T Consensus 195 ~Pe-aEWiWWLDsDALImNms---felPlery-----~~~NlVih------g~~~~l----~~~kdW~GLNtGsFLIRNc 255 (429)
T PLN03182 195 HPE-VEWIWWMDSDALFTDMT---FEIPLEKY-----EGYNLVIH------GWDELV----YDQKSWIGLNTGSFLIRNC 255 (429)
T ss_pred CCC-ceEEEEecCCceeecCC---CCCCHhHc-----CCcCeeec------cchhhh----eeccccCccceeeEEEEcC
Confidence 474 99999999999999732 11233211 00000000 011111 1124557899999999777
Q ss_pred HHHHhhHHHHHHHHHHHc-----------------cCCCccCCCCchHHHHHhc------cCeeecccccccccCCCCCc
Q 017643 263 KWRRVGYTRRIERWMEIQ-----------------KSDRIYELGSLPPFLLVFA------GHVAPIEHRWNQHGLGGDNV 319 (368)
Q Consensus 263 kwR~~~~~~ki~~~~~~~-----------------~~~~l~~~~DQd~LN~vf~------g~i~~L~~~wN~~~l~~~~~ 319 (368)
.|-.+ + +-.|...- +.+..++..||.+|-.++. +.-..|...|-.++. |..+
T Consensus 256 qWSld-l---LDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyLl~~~~~~w~~kv~le~~y~l~Gy-w~~i 330 (429)
T PLN03182 256 QWSLD-L---LDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGY-WVGL 330 (429)
T ss_pred HHHHH-H---HHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHHHHhcchhhccceEEeecceeccc-cHHH
Confidence 77542 1 11232221 1233456789999877652 234667777777743 2122
Q ss_pred cccccc----CCC-----CCcEEEeCCCCCCCCccCC
Q 017643 320 RGSCRN----LHP-----GPVSLLHWSGSGKPWLRLD 347 (368)
Q Consensus 320 ~~~~~~----l~~-----~~~~IIHf~G~~KPW~~~~ 347 (368)
.+.+.+ -++ .-|-|.||+| .||.....
T Consensus 331 v~~yee~~~~~~~g~gd~rwPfvtHF~G-ckpC~~~~ 366 (429)
T PLN03182 331 VDRYEEMMEKYHPGLGDDRWPFVTHFVG-CKPCGGYG 366 (429)
T ss_pred HHHHHHHHHhcCCCCCCcccceeEeecc-ceecCCCC
Confidence 111111 122 2468999999 79986554
No 27
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=92.31 E-value=11 Score=36.10 Aligned_cols=198 Identities=13% Similarity=0.132 Sum_probs=106.5
Q ss_pred CceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHHH-hhCCCcceEEEEeChhhhhhccchhhhhh
Q 017643 89 SLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLVR-STFPQLKFKVYYFDPEIVRNLISTSVRQA 167 (368)
Q Consensus 89 ~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~~-~~f~~l~i~~~~~d~~~~~~~is~~~~~~ 167 (368)
-+|-|...+-+.|.....-.+.|.=+|--...++.++|++|.... +.. +--|.-++++..+..+.
T Consensus 34 ~tIgl~vfatGkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~--~p~v~lg~~r~~~V~~v~~~~------------ 99 (271)
T cd02515 34 ITIGLTVFAVGKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAA--VPEVELGPGRRLTVLKIAEES------------ 99 (271)
T ss_pred CEEEEEEEEeccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCccc--CcccccCCCceeEEEEecccc------------
Confidence 356677777888999989999999998766677999999996431 111 11122346666553221
Q ss_pred hcCchhhHHHh-----hhhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeec--cccccccccccccccccccc
Q 017643 168 LEQPLNYARNY-----LADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPE--YCHANFSKYFTATFWSDKRF 240 (368)
Q Consensus 168 ~~s~~~y~Rl~-----l~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~--d~~~~f~~~~~~~~w~~~~l 240 (368)
.++-.++.|+- +.+..-.++|-+.++|+|+++.+++.. + .|+ ..+|... ....+ ..-|+ +..+..
T Consensus 100 ~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~--E-~Lg-~lva~lHp~~y~~~-~~~fp---YERrp~ 171 (271)
T cd02515 100 RWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGV--E-TLG-DSVAQLHPWWYGKP-RKQFP---YERRPS 171 (271)
T ss_pred CCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCH--H-Hhh-hhheecChhhhcCC-CCCCC---CcCCCC
Confidence 12223444443 323333359999999999999999872 1 122 2444421 11100 01111 111111
Q ss_pred cccc--CCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHc-cCC--CccCCCCchHHHHHhc-cC-eeecccccccc
Q 017643 241 SATF--NGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQ-KSD--RIYELGSLPPFLLVFA-GH-VAPIEHRWNQH 312 (368)
Q Consensus 241 ~~~~--~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~-~~~--~l~~~~DQd~LN~vf~-g~-i~~L~~~wN~~ 312 (368)
+..+ .+.+.-|+-+||.==-.+..- ++++.|.+-+..- ++. .+| .|.--||-.|- .+ .+.|++.|+..
T Consensus 172 S~AyIp~~eGdfYy~Ga~~GG~~~~vl--~l~~~c~~~i~~D~~n~I~A~w--HDESHLNkYf~~~Kp~KiLSPeY~w~ 246 (271)
T cd02515 172 SAAYIPEGEGDFYYHGAVFGGSVEEVY--RLTRACHEGILADKANGIEARW--HDESHLNKYFLLHKPTKVLSPEYLWD 246 (271)
T ss_pred ccccccCCCCCeEEeeeecCccHHHHH--HHHHHHHHHHHHHHhCCceEEe--ecHhHhHHHHhhCCCCeecChhhcCC
Confidence 1111 134455666665422222221 2344444433321 121 234 57888998763 33 89999999876
No 28
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism]
Probab=91.15 E-value=0.3 Score=48.79 Aligned_cols=94 Identities=18% Similarity=0.144 Sum_probs=54.1
Q ss_pred CCcccccceEEEecHHHHHhhHHHHHHHHHHHccCCCccCCCCchHHHHHhccCeeecccccccc-cCCCCCcc-ccccc
Q 017643 248 KPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQH-GLGGDNVR-GSCRN 325 (368)
Q Consensus 248 ~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~~~~l~~~~DQd~LN~vf~g~i~~L~~~wN~~-~l~~~~~~-~~~~~ 325 (368)
.++.||+|.|++-..-.. ...+++......-+..++|+.+|.+|...-.+.|+.+|.. +..+..-. .....
T Consensus 196 l~~~~n~~~~v~~ps~~~-------~~~~~~~~~~~~~~~~~~q~~l~~~f~~~~~~~~~~~n~~~~~~~~~p~~~~l~~ 268 (369)
T KOG1950|consen 196 LPLIFNSGLLVFEPSLCN-------YKDLMEFSEEFESYNGADQGFLHLIFSWIPDRPPPSVNLNLAKLWRHPKKNDLSR 268 (369)
T ss_pred ccceeccCccccCCCccc-------hhhHHHhhcccCCCCCccchhhHHHhhcccCCCcccccccccccccCccccchhh
Confidence 345699999998544321 1123443222234567899999999987655888888876 22221110 00011
Q ss_pred CCCCCcEEEeCCCCCCCCccCCC
Q 017643 326 LHPGPVSLLHWSGSGKPWLRLDS 348 (368)
Q Consensus 326 l~~~~~~IIHf~G~~KPW~~~~~ 348 (368)
..+.....+||.|.+|||.....
T Consensus 269 ~~~~~~~~~~y~~~~~p~~~~~~ 291 (369)
T KOG1950|consen 269 ASSVLRYALHYLGANKPELCYRD 291 (369)
T ss_pred cccccchhhhccccCCCCccccC
Confidence 11222345699998788876654
No 29
>PF03414 Glyco_transf_6: Glycosyltransferase family 6; InterPro: IPR005076 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 6 GT6 from CAZY comprises enzymes with three known activities; alpha-1,3-galactosyltransferase (2.4.1.151 from EC); alpha-1,3 N-acetylgalactosaminyltransferase (2.4.1.40 from EC); alpha-galactosyltransferase (2.4.1.37 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0016020 membrane; PDB: 2Y7A_B 2O1G_A 1R82_A 2RJ1_A 3IOJ_B 2RJ4_A 3I0C_A 3SX8_A 1ZJ1_A 3I0E_A ....
Probab=89.59 E-value=21 Score=35.18 Aligned_cols=196 Identities=12% Similarity=0.130 Sum_probs=96.8
Q ss_pred ceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHHH-hhCCCcceEEEEeChhhhhhccchhhhhhh
Q 017643 90 LVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLVR-STFPQLKFKVYYFDPEIVRNLISTSVRQAL 168 (368)
Q Consensus 90 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~~-~~f~~l~i~~~~~d~~~~~~~is~~~~~~~ 168 (368)
.|-++..+-+.|...+.-.+.|.=+|--...++.++|++|..+. +-. +.-+.-++++..+.... .+
T Consensus 100 tIGL~vfA~GkY~~fl~~Fl~SAek~Fm~g~~V~YYVFTD~p~~--vP~i~l~~~r~~~V~~v~~~~-----~W------ 166 (337)
T PF03414_consen 100 TIGLTVFATGKYIVFLKDFLESAEKHFMVGHRVIYYVFTDQPSK--VPRIELGPGRRLKVFEVQEEK-----RW------ 166 (337)
T ss_dssp EEEEEEEE-CCHHHHHHHHHHHHHHHBSTTSEEEEEEEES-GGG--S------TTEEEEEEE-SGGS-----SH------
T ss_pred eEEEEEEecccHHHHHHHHHHhHHHhccCCcEEEEEEEeCchhh--CCccccCCCceeEEEEecccC-----CC------
Confidence 45555566688999999999999998765678999999997421 100 11122245555553211 11
Q ss_pred cCchhhHHH-----hh-hhhhccccCcEEEEecceeeecChHHHHhcccCCCeeeeecc--ccccccccccccccccccc
Q 017643 169 EQPLNYARN-----YL-ADLLEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEY--CHANFSKYFTATFWSDKRF 240 (368)
Q Consensus 169 ~s~~~y~Rl-----~l-~~llp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d--~~~~f~~~~~~~~w~~~~l 240 (368)
+-.++.|+ ++ ..++. ++|-+..+|+|+++.+++.. ..| |..+|.... ...+ .+-|+.+ .+..
T Consensus 167 -qd~sm~Rm~~i~~~i~~~~~~-EvDYLFc~dvd~~F~~~vGv---E~L-g~lva~LHp~~y~~~-~~~FpYE---Rrp~ 236 (337)
T PF03414_consen 167 -QDISMMRMEMISEHIEQHIQH-EVDYLFCMDVDMVFQDHVGV---EIL-GDLVATLHPWFYFKP-RESFPYE---RRPK 236 (337)
T ss_dssp -HHHHHHHHHHHHHHHHHCHHH-H-SEEEEEESSEEE-S-B-G---GG--SSEEEEESTTTTTST-GGGS--B----STT
T ss_pred -ccchhHHHHHHHHHHHHHHhh-cCCEEEEEecceEEecccCH---HHH-HHHHHHhCHHHHCCC-hhhCccc---cCcc
Confidence 11233333 22 33455 59999999999999999875 112 456665321 1111 1112211 1111
Q ss_pred cccc--CCCCCcccccceEEEecHHHHHhhHHHHHHHHHHHcc---CCCccCCCCchHHHHHh--ccCeeecccccccc
Q 017643 241 SATF--NGRKPCYFNTGVVVIDLVKWRRVGYTRRIERWMEIQK---SDRIYELGSLPPFLLVF--AGHVAPIEHRWNQH 312 (368)
Q Consensus 241 ~~~~--~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~~~~~~~---~~~l~~~~DQd~LN~vf--~g~i~~L~~~wN~~ 312 (368)
+..+ .+.+..|+-+|+.==-..... ++++.|.+-+..-. -..+| .|.--||-.| +...+.|++.|+..
T Consensus 237 S~AyIp~~eGDfYY~ga~fGGt~~~vl--~Lt~~c~~~i~~D~~n~I~A~W--hDESHLNKYfl~~KPtKvLSPEY~Wd 311 (337)
T PF03414_consen 237 SQAYIPYGEGDFYYHGAFFGGTVEEVL--RLTEACHQGIMQDKANGIEALW--HDESHLNKYFLYHKPTKVLSPEYCWD 311 (337)
T ss_dssp STTB--TT--S--EECCEEEECHHHHH--HHHHHHHHHHHHHHHTT---TT--CHHHHHHHHHHHS--SEEE-GGGSBS
T ss_pred ccccccCCCCCeEEeceecCCcHHHHH--HHHHHHHHHHHhhhhcCceEec--cchhhhHHHHhhCCCceecCHHHccC
Confidence 1111 134566887776653333332 34555544443211 12344 5788899866 44488999999875
No 30
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of Caenorhabditis elegans homologues where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.; GO: 0016758 transferase activity, transferring hexosyl groups, 0016021 integral to membrane; PDB: 2P72_B 2P73_A 2P6W_A.
Probab=88.04 E-value=0.35 Score=45.47 Aligned_cols=147 Identities=20% Similarity=0.263 Sum_probs=16.9
Q ss_pred hhHHHh-hhhhh---ccccCcEEEEecceeeecChHHHHhcccC----------CCeeeeeccccccccccccccccccc
Q 017643 173 NYARNY-LADLL---EPCVRRVIYLDSDLVVVDDIAKLWTTSLG----------SRTIGAPEYCHANFSKYFTATFWSDK 238 (368)
Q Consensus 173 ~y~Rl~-l~~ll---p~~v~RVLYLD~D~IV~~DI~eL~~~dl~----------g~~iaAv~d~~~~f~~~~~~~~w~~~ 238 (368)
+..|+. +.+.+ |+ ++-|.|||+|++|.+-=-+|-+.-|+ +..+. +.+. ..+.... ...+
T Consensus 60 ~W~K~~~lr~~m~~~P~-~~wv~~lD~Dali~n~~~~L~~~il~p~~L~~~~~r~~~~~-p~~~---~~~~~~~-~~~~- 132 (239)
T PF05637_consen 60 SWAKIPALRAAMKKYPE-AEWVWWLDSDALIMNPDFSLEEHILSPSRLDSLLLRDVPIV-PPDS---IIKTYSV-IDGN- 132 (239)
T ss_dssp HHTHHHHHHHHHHH-TT--SEEEEE-TTEEE-------------------------------------------------
T ss_pred hhHHHHHHHHHHHhCCC-CCEEEEEcCCeEEEecccccccccccccccccccccccccc-cccc---ccccccc-cccc-
Confidence 344542 44445 74 89999999999999854444332221 11111 1110 0000000 0000
Q ss_pred ccccccCCCCCcccccceEEEecHHHHHhhHHHHHHH-HHHHc---cCCCccCCCCchHHHHHhc------cCeeecccc
Q 017643 239 RFSATFNGRKPCYFNTGVVVIDLVKWRRVGYTRRIER-WMEIQ---KSDRIYELGSLPPFLLVFA------GHVAPIEHR 308 (368)
Q Consensus 239 ~l~~~~~~~~~~yFNSGVmLidL~kwR~~~~~~ki~~-~~~~~---~~~~l~~~~DQd~LN~vf~------g~i~~L~~~ 308 (368)
... .+..++..++|+||+++--..|-. .+++ |.... ........++|.+|-.++. +++..+|.+
T Consensus 133 ~~~-li~t~d~~gLNtGsFliRns~ws~-----~fLd~w~~~~~~~~~~~~~~~~EQsAl~~ll~~~~~~~~~~~~vpq~ 206 (239)
T PF05637_consen 133 DIH-LIITQDWNGLNTGSFLIRNSPWSR-----DFLDAWADPLYRNYDWDQLEFDEQSALEHLLQWHPEILSKVALVPQR 206 (239)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc-cccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011 112356789999999996666544 3333 22211 1111112468998876543 456677765
Q ss_pred c-ccccCCCCCcccccccCCCCCcEEEeCCC
Q 017643 309 W-NQHGLGGDNVRGSCRNLHPGPVSLLHWSG 338 (368)
Q Consensus 309 w-N~~~l~~~~~~~~~~~l~~~~~~IIHf~G 338 (368)
| |....+... ..-.+++ -|+||+|
T Consensus 207 ~~nsy~~~~~~-----~~~~~GD-fvvhfaG 231 (239)
T PF05637_consen 207 WFNSYPEDECN-----YQYKEGD-FVVHFAG 231 (239)
T ss_dssp -------------------------------
T ss_pred ccccccccccc-----ccccccc-ccccccc
Confidence 5 332211111 1122344 6999999
No 31
>KOG1928 consensus Alpha-1,4-N-acetylglucosaminyltransferase [Carbohydrate transport and metabolism]
Probab=85.96 E-value=0.92 Score=45.19 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=38.2
Q ss_pred hcccccccCcccCCCCccCCCCCCC---cccCCCceeEEEEeC--c-cchHhHHHHHHHHHhhcCCCCcEEEEEEeCC
Q 017643 59 FRKASVFRNADECGSTSYNVNGGGA---SVCDPSLVHVAITLD--V-EYLRGSIAAVHSILQHSTCPENIFFHFLVSD 130 (368)
Q Consensus 59 ~~~~~~~~~~~~c~~~~~~~~~~~~---~~~~~~~i~I~~~~D--~-~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~ 130 (368)
.+|-++++|-..|-..++-++.+.. ..| ...++|+-- . .+-.--+-+|-|+.++++. -++.|+...
T Consensus 97 ~~~l~e~~~~~s~~~~~sf~~~~~~~~~~~c---~~~~fm~w~S~~~~f~~r~~~sIESa~k~hP~---~cv~vls~t 168 (409)
T KOG1928|consen 97 KIELQELENLSSELKSPSFQSRVNSFFRKEC---SVRFFMTWISPAESFGVREMCSIESAFKTHPE---GCVVVLSKT 168 (409)
T ss_pred cchhhheeeccccccCcccCCCcchhhccCC---ceeEEEEecccccCCChhhhhhhHHHHhhCCC---ceEEEEEcc
Confidence 3466677776655444333332222 225 577887653 2 2334467789999999984 455665543
No 32
>PLN03181 glycosyltransferase; Provisional
Probab=83.37 E-value=2.7 Score=42.53 Aligned_cols=108 Identities=19% Similarity=0.264 Sum_probs=57.0
Q ss_pred hccccCcEEEEecceeeecChHHHHhcccCCCeeeeecccccccccccccccccccccccccCCCCCcccccceEEEecH
Q 017643 183 LEPCVRRVIYLDSDLVVVDDIAKLWTTSLGSRTIGAPEYCHANFSKYFTATFWSDKRFSATFNGRKPCYFNTGVVVIDLV 262 (368)
Q Consensus 183 lp~~v~RVLYLD~D~IV~~DI~eL~~~dl~g~~iaAv~d~~~~f~~~~~~~~w~~~~l~~~~~~~~~~yFNSGVmLidL~ 262 (368)
.|+ .+-+-|||+|++|.+.=-+| ++..+ .+.+...+ .|....+ ..++-..+|+||++|--.
T Consensus 196 ~Pe-AEWfWWLDsDALIMNp~~sL---Pl~ry-----~~~NLvvh------g~p~~vy----~~qdw~GlN~GsFLIRNc 256 (453)
T PLN03181 196 HPE-AEWIWWVDSDAVFTDMDFKL---PLHRY-----RDHNLVVH------GWPKLIY----EKRSWTALNAGVFLIRNC 256 (453)
T ss_pred CCC-ceEEEEecCCceeecCCCCC---CHhhc-----CCcccccc------CCccccc----ccccccccceeeeEEecC
Confidence 674 99999999999999752221 22100 00000000 0110001 123456899999999766
Q ss_pred HHHHhhHHHHHHHHHHH-----------------ccCCCccCCCCchHHHHHhc------cCeeeccccccccc
Q 017643 263 KWRRVGYTRRIERWMEI-----------------QKSDRIYELGSLPPFLLVFA------GHVAPIEHRWNQHG 313 (368)
Q Consensus 263 kwR~~~~~~ki~~~~~~-----------------~~~~~l~~~~DQd~LN~vf~------g~i~~L~~~wN~~~ 313 (368)
.|-..- +..|... -+++...+..||.+|-.++. +.-..|+..|-.|+
T Consensus 257 qWSl~L----LDaWa~Mgp~~p~~~~~G~~l~~~l~~r~~~eaDDQsaLvyll~~~~~~w~~k~ylE~~yy~~G 326 (453)
T PLN03181 257 QWSLDF----MDAWASMGPASPEYAKWGKILRSTFKDKLFPESDDQSALVYLLYKHKEKWGDKIYLEGEYYFEG 326 (453)
T ss_pred HHHHHH----HHHHHhcCCCCchHHHHHHHHHHHhCCCCCCCccchHHHHHHHHhccchhccceeeecceeeee
Confidence 664321 1113221 12333456679998765441 23466777777764
No 33
>PF04765 DUF616: Protein of unknown function (DUF616); InterPro: IPR006852 The entry represents a protein of unknown function. The function of is unknown although a number of the members are thought to be glycosyltransferases.
Probab=78.77 E-value=4.8 Score=39.27 Aligned_cols=92 Identities=15% Similarity=0.235 Sum_probs=61.0
Q ss_pred CcEEEEEEeCCCCHHHHHHh-hCCC----c-ceEEEEeChhhhhhccchhhhhhhcCchhhHHHhhhhhhccccCcEEEE
Q 017643 120 ENIFFHFLVSDTNLETLVRS-TFPQ----L-KFKVYYFDPEIVRNLISTSVRQALEQPLNYARNYLADLLEPCVRRVIYL 193 (368)
Q Consensus 120 ~~i~fhvl~~~~~~~~l~~~-~f~~----l-~i~~~~~d~~~~~~~is~~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYL 193 (368)
++++|..++|+.+++.+... ..+. + ..++..++.... ....+. .-+.+++...+||+ ++--|||
T Consensus 90 ~~vcf~mF~D~~t~~~l~~~~~~~~~~~~ig~WrIv~v~~lp~----~d~rr~-----~r~~K~lpHrlfp~-y~ySIWI 159 (305)
T PF04765_consen 90 KNVCFFMFVDEETLKSLESEGHIPDENKKIGIWRIVVVKNLPY----DDPRRN-----GRIPKLLPHRLFPN-YDYSIWI 159 (305)
T ss_pred cCccEEEEEehhhHHHHHhcCCccccccccCceEEEEecCCCC----cchhhc-----CcccceeccccCCC-CceEEEE
Confidence 46899999999877666441 1111 1 345555422111 111111 23678889999995 9999999
Q ss_pred ecceeeecChHHHHhccc--CCCeeeeecc
Q 017643 194 DSDLVVVDDIAKLWTTSL--GSRTIGAPEY 221 (368)
Q Consensus 194 D~D~IV~~DI~eL~~~dl--~g~~iaAv~d 221 (368)
|+-+.+++|+..|.+.-+ ++..+|+...
T Consensus 160 D~ki~L~~Dp~~lie~~l~~~~~~~Ai~~H 189 (305)
T PF04765_consen 160 DGKIQLIVDPLLLIERFLWRKNADIAISKH 189 (305)
T ss_pred eeeEEEecCHHHHHHHHHhcCCCcEEEeCC
Confidence 999999999999887665 4667888553
No 34
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=66.52 E-value=70 Score=26.07 Aligned_cols=92 Identities=12% Similarity=0.140 Sum_probs=53.5
Q ss_pred hHhHHHHHHHHHhhcCCCCcEEEEEEeCCCC--HHHHHHhhC-CCcceEEEEeChhhhhhccchhhhhhhcCchhhHHHh
Q 017643 102 LRGSIAAVHSILQHSTCPENIFFHFLVSDTN--LETLVRSTF-PQLKFKVYYFDPEIVRNLISTSVRQALEQPLNYARNY 178 (368)
Q Consensus 102 l~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~--~~~l~~~~f-~~l~i~~~~~d~~~~~~~is~~~~~~~~s~~~y~Rl~ 178 (368)
...+.-++.|+++.+. .+..+.|+.++.+ ..+++++.. ....++++..+.+. + ...++..
T Consensus 10 ~~~l~~~l~sl~~q~~--~~~eiivvdd~s~d~~~~~~~~~~~~~~~i~~i~~~~n~--g-------------~~~~~n~ 72 (169)
T PF00535_consen 10 AEYLERTLESLLKQTD--PDFEIIVVDDGSTDETEEILEEYAESDPNIRYIRNPENL--G-------------FSAARNR 72 (169)
T ss_dssp TTTHHHHHHHHHHHSG--CEEEEEEEECS-SSSHHHHHHHHHCCSTTEEEEEHCCCS--H-------------HHHHHHH
T ss_pred HHHHHHHHHHHhhccC--CCEEEEEeccccccccccccccccccccccccccccccc--c-------------ccccccc
Confidence 4555677888888743 4578888877763 334444322 23356665543221 1 1334444
Q ss_pred hhhhhccccCcEEEEecceeeecC-hHHHHhcccC
Q 017643 179 LADLLEPCVRRVIYLDSDLVVVDD-IAKLWTTSLG 212 (368)
Q Consensus 179 l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~dl~ 212 (368)
..+.... +-++++|+|.++..+ +.+|.+.-.+
T Consensus 73 ~~~~a~~--~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 73 GIKHAKG--EYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp HHHH--S--SEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred cccccce--eEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 4455543 699999999999998 7777765433
No 35
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=64.26 E-value=20 Score=33.06 Aligned_cols=24 Identities=21% Similarity=0.321 Sum_probs=19.8
Q ss_pred ccCcEEEEecceeeecC-hHHHHhc
Q 017643 186 CVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 186 ~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
..+-++.+|+|+++..| |.++...
T Consensus 73 ~~e~i~~~DaD~~~~~~~l~~l~~~ 97 (244)
T cd04190 73 DPEFILLVDADTKFDPDSIVQLYKA 97 (244)
T ss_pred CCCEEEEECCCCcCCHhHHHHHHHH
Confidence 47899999999999888 6767654
No 36
>PF04488 Gly_transf_sug: Glycosyltransferase sugar-binding region containing DXD motif ; InterPro: IPR007577 This entry represents those sugar-binding regions of glycosyltransferases that contain a DXD motif. The DXD motif is a short conserved motif found in many families of glycosyltransferases, which add a range of different sugars to other sugars, phosphates and proteins. DXD-containing glycosyltransferases all use nucleoside diphosphate sugars as donors and require divalent cations, usually manganese. The DXD motif is expected to play a carbohydrate binding role in sugar-nucleoside diphosphate and manganese dependent glycosyltransferases [].
Probab=61.94 E-value=4.3 Score=32.60 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=24.9
Q ss_pred hhhHHHhhhhhhccccCcEEEEecceeeecCh-HHHH
Q 017643 172 LNYARNYLADLLEPCVRRVIYLDSDLVVVDDI-AKLW 207 (368)
Q Consensus 172 ~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI-~eL~ 207 (368)
+-++|+.+--.... ||+|.|+++.+++ +++.
T Consensus 66 sD~~R~~~L~~~GG-----iY~D~D~~~~rpl~~~~~ 97 (103)
T PF04488_consen 66 SDLLRYLVLYKYGG-----IYLDLDVICLRPLDDPWL 97 (103)
T ss_pred HHHHHHHHHHHcCc-----EEEeCccccCcchhhhhh
Confidence 56889887555554 8999999999999 6654
No 37
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=55.87 E-value=88 Score=32.14 Aligned_cols=116 Identities=11% Similarity=0.096 Sum_probs=53.6
Q ss_pred ceeE-EEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCCcceE-EEEeChhhhhhccchhhh
Q 017643 90 LVHV-AITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQLKFK-VYYFDPEIVRNLISTSVR 165 (368)
Q Consensus 90 ~i~I-~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~l~i~-~~~~d~~~~~~~is~~~~ 165 (368)
.++| +|+|+. ..++.-++.||+++.+..+.+.+.|--|+.+.+ +.+ ..|.. .++ +...+.+.+.........
T Consensus 94 ~~pVlV~AcNR--p~yl~r~L~sLl~~rp~~~~fpIiVSQDg~~~~~~~vi-~~y~~-~v~~i~~~~~~~i~~~~~~~~~ 169 (434)
T PF03071_consen 94 VIPVLVFACNR--PDYLRRTLDSLLKYRPSAEKFPIIVSQDGDDEEVAEVI-KSYGD-QVTYIQHPDFSPITIPPKEKKF 169 (434)
T ss_dssp ---EEEEESS---TT-HHHHHHHHHHH-S-TTTS-EEEEE-TT-HHHHHHH-HGGGG-GSEEEE-S--S-----TT-GGG
T ss_pred cceEEEEecCC--cHHHHHHHHHHHHcCCCCCCccEEEEecCCcHHHHHHH-HHhhh-hheeeecCCcCCceeCcccccc
Confidence 3444 466664 334566888899876544556666666665422 222 23421 122 222222221110000000
Q ss_pred hhhcCchhhHHHhhhhhhcc-ccCcEEEEecceeeecChHHHHhc
Q 017643 166 QALEQPLNYARNYLADLLEP-CVRRVIYLDSDLVVVDDIAKLWTT 209 (368)
Q Consensus 166 ~~~~s~~~y~Rl~l~~llp~-~v~RVLYLD~D~IV~~DI~eL~~~ 209 (368)
.++...+..+|.-|..++.. .+++||.|.-|+.+--|+=+-|+.
T Consensus 170 ~~y~~IA~HYk~aL~~vF~~~~~~~vIIlEDDL~isPDFf~Yf~~ 214 (434)
T PF03071_consen 170 KGYYKIARHYKWALSQVFNKFKYSSVIILEDDLEISPDFFEYFSA 214 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS--SEEEEEETTEEE-TTHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhcCCceEEEEecCcccCccHHHHHHH
Confidence 11222345566678888742 489999999999999998776654
No 38
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=53.01 E-value=1.6e+02 Score=29.87 Aligned_cols=100 Identities=18% Similarity=0.164 Sum_probs=55.4
Q ss_pred ceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHH---HhhCCCcceEEEEeChhhhhhccchhh
Q 017643 90 LVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLV---RSTFPQLKFKVYYFDPEIVRNLISTSV 164 (368)
Q Consensus 90 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~---~~~f~~l~i~~~~~d~~~~~~~is~~~ 164 (368)
.+.|++.+=+.- ..+..++.|+.+.+-.+..+.+.|+.++.+++ +++ ++.++.+ ++...+.+ .++
T Consensus 50 ~vsVIIP~yNe~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~~~~~v--~v~~~~~~--~Gk----- 119 (439)
T TIGR03111 50 DITIIIPVYNSE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQNEFPGL--SLRYMNSD--QGK----- 119 (439)
T ss_pred CEEEEEEeCCCh-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHHhCCCe--EEEEeCCC--CCH-----
Confidence 466776664332 66788899998765434457788887765433 222 2445543 33333322 111
Q ss_pred hhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 165 RQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 165 ~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
+.++-..-+... -+=|+.+|+|.++..| +.++.+.
T Consensus 120 --------a~AlN~gl~~s~--g~~v~~~DaD~~~~~d~L~~l~~~ 155 (439)
T TIGR03111 120 --------AKALNAAIYNSI--GKYIIHIDSDGKLHKDAIKNMVTR 155 (439)
T ss_pred --------HHHHHHHHHHcc--CCEEEEECCCCCcChHHHHHHHHH
Confidence 122222112222 3569999999999765 4555543
No 39
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=49.78 E-value=1.4e+02 Score=24.36 Aligned_cols=86 Identities=17% Similarity=0.173 Sum_probs=48.7
Q ss_pred hHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCCcceEEEEeChhhhhhccchhhhhhhcCchhhHHHhh
Q 017643 102 LRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQLKFKVYYFDPEIVRNLISTSVRQALEQPLNYARNYL 179 (368)
Q Consensus 102 l~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~~~s~~~y~Rl~l 179 (368)
...+.-++.|+.+... ....+.|+.++...+ +.+++..+ .++++..+.+. + ...+|...
T Consensus 9 ~~~l~~~l~sl~~~~~--~~~~iiivdd~s~~~~~~~~~~~~~--~~~~~~~~~~~--g-------------~~~a~n~~ 69 (166)
T cd04186 9 LEYLKACLDSLLAQTY--PDFEVIVVDNASTDGSVELLRELFP--EVRLIRNGENL--G-------------FGAGNNQG 69 (166)
T ss_pred HHHHHHHHHHHHhccC--CCeEEEEEECCCCchHHHHHHHhCC--CeEEEecCCCc--C-------------hHHHhhHH
Confidence 5667888999998765 347778877765422 23333333 34443321110 1 12223322
Q ss_pred hhhhccccCcEEEEecceeeecC-hHHHHh
Q 017643 180 ADLLEPCVRRVIYLDSDLVVVDD-IAKLWT 208 (368)
Q Consensus 180 ~~llp~~v~RVLYLD~D~IV~~D-I~eL~~ 208 (368)
-+.. ..+-++++|+|.++..+ +..+.+
T Consensus 70 ~~~~--~~~~i~~~D~D~~~~~~~l~~~~~ 97 (166)
T cd04186 70 IREA--KGDYVLLLNPDTVVEPGALLELLD 97 (166)
T ss_pred HhhC--CCCEEEEECCCcEECccHHHHHHH
Confidence 2333 36899999999998876 555554
No 40
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=48.74 E-value=2e+02 Score=25.89 Aligned_cols=101 Identities=16% Similarity=0.132 Sum_probs=55.9
Q ss_pred ceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCH--HHHHHhhCCCcceEEEEeChhhhhhccchhhhhh
Q 017643 90 LVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNL--ETLVRSTFPQLKFKVYYFDPEIVRNLISTSVRQA 167 (368)
Q Consensus 90 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~--~~l~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~ 167 (368)
.+-|++.+=+. ...+..++.|+++....+..+.+.|+.++.+. .+++++ +....++++..+.. .+
T Consensus 30 ~isVvip~~n~-~~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~-~~~~~v~~i~~~~~--~g--------- 96 (251)
T cd06439 30 TVTIIIPAYNE-EAVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE-YADKGVKLLRFPER--RG--------- 96 (251)
T ss_pred EEEEEEecCCc-HHHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH-HhhCcEEEEEcCCC--CC---------
Confidence 46666666332 35677888999876543334777777776542 233332 22113444432211 01
Q ss_pred hcCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 168 LEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 168 ~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
...++...-+... -|-++++|+|+++..+ +.++++.
T Consensus 97 ----~~~a~n~gi~~a~--~d~i~~lD~D~~~~~~~l~~l~~~ 133 (251)
T cd06439 97 ----KAAALNRALALAT--GEIVVFTDANALLDPDALRLLVRH 133 (251)
T ss_pred ----hHHHHHHHHHHcC--CCEEEEEccccCcCHHHHHHHHHH
Confidence 1223333223333 3889999999999876 6667665
No 41
>PRK15383 type III secretion system protein; Provisional
Probab=47.17 E-value=11 Score=35.62 Aligned_cols=23 Identities=30% Similarity=0.677 Sum_probs=19.7
Q ss_pred CcEEEEecceeeecChHHHHhcc
Q 017643 188 RRVIYLDSDLVVVDDIAKLWTTS 210 (368)
Q Consensus 188 ~RVLYLD~D~IV~~DI~eL~~~d 210 (368)
+-+||||+|+|+.+.+.-|+.-|
T Consensus 220 ~GCIYLD~DMilT~KLG~ly~PD 242 (335)
T PRK15383 220 GGCIYLDADMLLTDKLGTLYLPD 242 (335)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 66999999999999998887544
No 42
>PRK15382 non-LEE encoded effector protein NleB; Provisional
Probab=46.98 E-value=11 Score=35.59 Aligned_cols=23 Identities=30% Similarity=0.736 Sum_probs=19.7
Q ss_pred CcEEEEecceeeecChHHHHhcc
Q 017643 188 RRVIYLDSDLVVVDDIAKLWTTS 210 (368)
Q Consensus 188 ~RVLYLD~D~IV~~DI~eL~~~d 210 (368)
+-+||||+|+|+.+.+.-|+.-|
T Consensus 212 ~GCIYLD~DMilT~KLG~ly~PD 234 (326)
T PRK15382 212 EGCIYLDADMIITDKLGVLYAPD 234 (326)
T ss_pred CceEEeecceeeecccccEEcCC
Confidence 66999999999999998877544
No 43
>PRK15384 type III secretion system protein; Provisional
Probab=46.75 E-value=10 Score=35.68 Aligned_cols=23 Identities=22% Similarity=0.673 Sum_probs=19.6
Q ss_pred CcEEEEecceeeecChHHHHhcc
Q 017643 188 RRVIYLDSDLVVVDDIAKLWTTS 210 (368)
Q Consensus 188 ~RVLYLD~D~IV~~DI~eL~~~d 210 (368)
+-+||||+|+|+.+.+.-|+.-|
T Consensus 217 ~GCIYLDaDMilT~KLG~ly~PD 239 (336)
T PRK15384 217 SGCIYLDADMIITEKLGGIYIPD 239 (336)
T ss_pred CceEEeeccceeecccccEEcCC
Confidence 56899999999999998877544
No 44
>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function.
Probab=45.26 E-value=16 Score=33.77 Aligned_cols=26 Identities=31% Similarity=0.470 Sum_probs=21.7
Q ss_pred hhhhhhccccCcEEEEecceeeecChH
Q 017643 178 YLADLLEPCVRRVIYLDSDLVVVDDIA 204 (368)
Q Consensus 178 ~l~~llp~~v~RVLYLD~D~IV~~DI~ 204 (368)
.++.+||. ++-||+||+|+-|+..=.
T Consensus 34 vva~~L~~-~~~vlflDaDigVvNp~~ 59 (222)
T PF03314_consen 34 VVAKILPE-YDWVLFLDADIGVVNPNR 59 (222)
T ss_pred HHHHHhcc-CCEEEEEcCCceeecCcc
Confidence 36788995 999999999999988533
No 45
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=44.38 E-value=2.3e+02 Score=25.12 Aligned_cols=97 Identities=16% Similarity=0.048 Sum_probs=51.9
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHH--HHHhhCCCcceEEEEeChhhhhhccchhhhhhh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLET--LVRSTFPQLKFKVYYFDPEIVRNLISTSVRQAL 168 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~--l~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~~ 168 (368)
|-|++.+=++-...+..++.|+.+.+ +..+.|+.++.+.+. .+....+...+.+.. ... .++
T Consensus 2 isVvIp~~ne~~~~l~~~l~sl~~q~----~~eiivvdd~s~d~~~~~l~~~~~~~~~~v~~--~~~-~g~--------- 65 (235)
T cd06434 2 VTVIIPVYDEDPDVFRECLRSILRQK----PLEIIVVTDGDDEPYLSILSQTVKYGGIFVIT--VPH-PGK--------- 65 (235)
T ss_pred eEEEEeecCCChHHHHHHHHHHHhCC----CCEEEEEeCCCChHHHHHHHhhccCCcEEEEe--cCC-CCh---------
Confidence 34555553333466788899999876 267778777765332 221122222233322 111 111
Q ss_pred cCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 169 EQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 169 ~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
..++..--+.. ..+-|+++|+|+++..| |.++.+.
T Consensus 66 ----~~a~n~g~~~a--~~d~v~~lD~D~~~~~~~l~~l~~~ 101 (235)
T cd06434 66 ----RRALAEGIRHV--TTDIVVLLDSDTVWPPNALPEMLKP 101 (235)
T ss_pred ----HHHHHHHHHHh--CCCEEEEECCCceeChhHHHHHHHh
Confidence 11111111112 36999999999999998 6666654
No 46
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=42.93 E-value=1.9e+02 Score=27.24 Aligned_cols=98 Identities=21% Similarity=0.143 Sum_probs=51.6
Q ss_pred EEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH---HHHH----hhCCCcceEEEEeChhhhhhccchhhh
Q 017643 93 VAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE---TLVR----STFPQLKFKVYYFDPEIVRNLISTSVR 165 (368)
Q Consensus 93 I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~---~l~~----~~f~~l~i~~~~~d~~~~~~~is~~~~ 165 (368)
|++.+=+.-...+..++.||++.+.......+.|+-++.+.. .+.+ ...+ .++++..+.+. +
T Consensus 2 IIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~~~~~~~~--~v~vi~~~~n~--G------- 70 (299)
T cd02510 2 VIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKYLP--KVKVLRLKKRE--G------- 70 (299)
T ss_pred EEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHHHHhhcCC--cEEEEEcCCCC--C-------
Confidence 344443333477788899999877643234677776665422 2211 2222 34454322110 1
Q ss_pred hhhcCchhhHHHhhhhhhccccCcEEEEecceeeec-ChHHHHhc
Q 017643 166 QALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVD-DIAKLWTT 209 (368)
Q Consensus 166 ~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~-DI~eL~~~ 209 (368)
..-+|..-...-. -+=+++||+|+++.. -|.+|.+.
T Consensus 71 ------~~~a~N~g~~~A~--gd~i~fLD~D~~~~~~wL~~ll~~ 107 (299)
T cd02510 71 ------LIRARIAGARAAT--GDVLVFLDSHCEVNVGWLEPLLAR 107 (299)
T ss_pred ------HHHHHHHHHHHcc--CCEEEEEeCCcccCccHHHHHHHH
Confidence 1122333223332 488999999999965 35556553
No 47
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=42.86 E-value=2e+02 Score=25.96 Aligned_cols=102 Identities=17% Similarity=0.129 Sum_probs=51.6
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCC-cceEEEEeChhhhhhccchhhhhh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQ-LKFKVYYFDPEIVRNLISTSVRQA 167 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~-l~i~~~~~d~~~~~~~is~~~~~~ 167 (368)
+-|++.+-+. -..+.-++.|+++.+-.+.++.+.|+.++.+.+ +++++ +.. -.+++.......-.++
T Consensus 3 vsIiIp~~Ne-~~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~-~~~~~~~~i~~~~~~~~~G~-------- 72 (241)
T cd06427 3 YTILVPLYKE-AEVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARA-LRLPSIFRVVVVPPSQPRTK-------- 72 (241)
T ss_pred EEEEEecCCc-HHHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHH-hccCCCeeEEEecCCCCCch--------
Confidence 5566666433 356778899998754323457777777765433 22322 211 1233333322110010
Q ss_pred hcCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 168 LEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 168 ~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
..++-..-+.- .-+=|+++|+|+++-.| +.++...
T Consensus 73 -----~~a~n~g~~~a--~gd~i~~~DaD~~~~~~~l~~~~~~ 108 (241)
T cd06427 73 -----PKACNYALAFA--RGEYVVIYDAEDAPDPDQLKKAVAA 108 (241)
T ss_pred -----HHHHHHHHHhc--CCCEEEEEcCCCCCChHHHHHHHHH
Confidence 11122211222 24889999999887765 4455543
No 48
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=42.47 E-value=1.8e+02 Score=23.45 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=46.6
Q ss_pred HhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCC--cceEEEEeChhhhhhccchhhhhhhcCchhhHHHh
Q 017643 103 RGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQ--LKFKVYYFDPEIVRNLISTSVRQALEQPLNYARNY 178 (368)
Q Consensus 103 ~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~--l~i~~~~~d~~~~~~~is~~~~~~~~s~~~y~Rl~ 178 (368)
..+..++.|+++.+. .+..+.|+.++.+.+ ++..+.... ..+.+.. .... .++ ..+|..
T Consensus 10 ~~l~~~l~sl~~q~~--~~~~iivvdd~s~d~t~~~~~~~~~~~~~~~~~~~-~~~~-~g~-------------~~~~n~ 72 (180)
T cd06423 10 AVIERTIESLLALDY--PKLEVIVVDDGSTDDTLEILEELAALYIRRVLVVR-DKEN-GGK-------------AGALNA 72 (180)
T ss_pred HHHHHHHHHHHhCCC--CceEEEEEeCCCccchHHHHHHHhccccceEEEEE-eccc-CCc-------------hHHHHH
Confidence 677788999998765 347888887776432 222222111 1122221 1111 111 112222
Q ss_pred hhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 179 LADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 179 l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
.-+... .+-++++|+|.++..+ +.+++..
T Consensus 73 ~~~~~~--~~~i~~~D~D~~~~~~~l~~~~~~ 102 (180)
T cd06423 73 GLRHAK--GDIVVVLDADTILEPDALKRLVVP 102 (180)
T ss_pred HHHhcC--CCEEEEECCCCCcChHHHHHHHHH
Confidence 222223 5889999999999876 5555333
No 49
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=41.87 E-value=1.9e+02 Score=25.30 Aligned_cols=92 Identities=10% Similarity=0.030 Sum_probs=47.6
Q ss_pred hHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCH--HHHHH--hhCCCcceEEEEeChhhhhhccchhhhhhhcCchhhHHH
Q 017643 102 LRGSIAAVHSILQHSTCPENIFFHFLVSDTNL--ETLVR--STFPQLKFKVYYFDPEIVRNLISTSVRQALEQPLNYARN 177 (368)
Q Consensus 102 l~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~--~~l~~--~~f~~l~i~~~~~d~~~~~~~is~~~~~~~~s~~~y~Rl 177 (368)
...+.-++.||++.+..+..+.+.|+.++.+. .++++ ...+..++.+...+. .. ... ...++.
T Consensus 9 ~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~v~~~~~~~---~~--~~g--------~~~a~n 75 (229)
T cd04192 9 AENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAAKPNFQLKILNNSR---VS--ISG--------KKNALT 75 (229)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHhCCCcceEEeeccC---cc--cch--------hHHHHH
Confidence 35577889999887654334778877776532 23332 223333444433221 00 000 111222
Q ss_pred hhhhhhccccCcEEEEecceeeecCh-HHHHh
Q 017643 178 YLADLLEPCVRRVIYLDSDLVVVDDI-AKLWT 208 (368)
Q Consensus 178 ~l~~llp~~v~RVLYLD~D~IV~~DI-~eL~~ 208 (368)
...+.. ..+-++++|+|.++..|. +.+.+
T Consensus 76 ~g~~~~--~~d~i~~~D~D~~~~~~~l~~l~~ 105 (229)
T cd04192 76 TAIKAA--KGDWIVTTDADCVVPSNWLLTFVA 105 (229)
T ss_pred HHHHHh--cCCEEEEECCCcccCHHHHHHHHH
Confidence 221222 368999999999987653 33443
No 50
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=39.30 E-value=3.2e+02 Score=25.61 Aligned_cols=47 Identities=15% Similarity=0.168 Sum_probs=30.4
Q ss_pred hhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhcccCCCeeeeec
Q 017643 173 NYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTTSLGSRTIGAPE 220 (368)
Q Consensus 173 ~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~dl~g~~iaAv~ 220 (368)
...+-++...-. ..+-++.+|+|+++..| |.++...-..+.-+|+|.
T Consensus 83 g~l~~~~~~~~~-~~~~i~~~DaD~~~~p~~l~~~v~~~~~~~~vg~vq 130 (254)
T cd04191 83 GNIADFCRRWGS-RYDYMVVLDADSLMSGDTIVRLVRRMEANPRAGIIQ 130 (254)
T ss_pred HHHHHHHHHhCC-CCCEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEe
Confidence 344444433222 47899999999999987 666765433344567765
No 51
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=38.52 E-value=2.4e+02 Score=27.96 Aligned_cols=110 Identities=14% Similarity=0.017 Sum_probs=55.6
Q ss_pred EEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCCcceEEE-EeChhhhhhccchhhhhhhcC
Q 017643 94 AITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQLKFKVY-YFDPEIVRNLISTSVRQALEQ 170 (368)
Q Consensus 94 ~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~l~i~~~-~~d~~~~~~~is~~~~~~~~s 170 (368)
+++++. ..++.-++.||++..+..++..++|..|+...+ +..+ .+. .+++.. ..+....+-..+... +....
T Consensus 6 v~ayNR--p~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~-~~~-~~i~~i~~~~~~~~~~~~~~~~-~~y~~ 80 (334)
T cd02514 6 VIACNR--PDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAK-SFG-DGVTHIQHPPISIKNVNPPHKF-QGYYR 80 (334)
T ss_pred EEecCC--HHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHH-hhc-cccEEEEcccccccccCccccc-chhhH
Confidence 344443 456777889999875333567888888886533 2222 221 122221 111111000000000 00111
Q ss_pred chhhHHHhhhhhhcc-ccCcEEEEecceeeecChHHHHh
Q 017643 171 PLNYARNYLADLLEP-CVRRVIYLDSDLVVVDDIAKLWT 208 (368)
Q Consensus 171 ~~~y~Rl~l~~llp~-~v~RVLYLD~D~IV~~DI~eL~~ 208 (368)
.+..+|.-+-.++.. .+++||.||.|+++--|.=+.++
T Consensus 81 ia~hyk~aln~vF~~~~~~~vIILEDDl~~sPdFf~yf~ 119 (334)
T cd02514 81 IARHYKWALTQTFNLFGYSFVIILEDDLDIAPDFFSYFQ 119 (334)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEECCCCccCHhHHHHHH
Confidence 122233445555531 38999999999999999655444
No 52
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=35.59 E-value=2.7e+02 Score=30.44 Aligned_cols=118 Identities=14% Similarity=0.213 Sum_probs=60.7
Q ss_pred CceeEEEEeCcc---ch-HhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHH-------H--HHhhCCCcceEEEEeChhh
Q 017643 89 SLVHVAITLDVE---YL-RGSIAAVHSILQHSTCPENIFFHFLVSDTNLET-------L--VRSTFPQLKFKVYYFDPEI 155 (368)
Q Consensus 89 ~~i~I~~~~D~~---yl-~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~-------l--~~~~f~~l~i~~~~~d~~~ 155 (368)
..+.|++.+=+. .+ ..+.+++.|+.+... +.+++|+++.|+.+.+. + +++.++. ..+++......
T Consensus 124 ~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~-~~~~e~~vLdD~~d~~~~~~e~~~~~~L~~~~~~-~~~i~yr~R~~ 201 (691)
T PRK05454 124 ARTAILMPIYNEDPARVFAGLRAMYESLAATGH-GAHFDFFILSDTRDPDIAAAEEAAWLELRAELGG-EGRIFYRRRRR 201 (691)
T ss_pred CceEEEEeCCCCChHHHHHHHHHHHHHHHhcCC-CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcCC-CCcEEEEECCc
Confidence 346666665322 22 346677778886544 35799999998865321 1 1233432 22232221110
Q ss_pred hhhccchhhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhcccCCCeeeeec
Q 017643 156 VRNLISTSVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTTSLGSRTIGAPE 220 (368)
Q Consensus 156 ~~~~is~~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~dl~g~~iaAv~ 220 (368)
=.+ +++ .+...+.|.+ ...+|-++-||+|++..+| +.++...-..+.-+|++.
T Consensus 202 n~~------~Ka-GNl~~~~~~~-----~~~~eyivvLDADs~m~~d~L~~lv~~m~~dP~vGlVQ 255 (691)
T PRK05454 202 NVG------RKA-GNIADFCRRW-----GGAYDYMVVLDADSLMSGDTLVRLVRLMEANPRAGLIQ 255 (691)
T ss_pred CCC------ccH-HHHHHHHHhc-----CCCcCEEEEEcCCCCCCHHHHHHHHHHHhhCcCEEEEe
Confidence 001 011 0111222221 1358999999999999998 555665322233466654
No 53
>PF07801 DUF1647: Protein of unknown function (DUF1647); InterPro: IPR012444 This entry consists of hypothetical proteins of unknown function.
Probab=31.69 E-value=2.4e+02 Score=24.41 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=45.2
Q ss_pred CCCceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHHHHH--HhhCCCcceEEEEeChhhhhh
Q 017643 87 DPSLVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLETLV--RSTFPQLKFKVYYFDPEIVRN 158 (368)
Q Consensus 87 ~~~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~~l~--~~~f~~l~i~~~~~d~~~~~~ 158 (368)
+.+.+-+|.++.+++...+.-++.||.++.+. . .+.+..-+++.+.+. +..+++ +++..||-+....
T Consensus 58 n~~~vvfVSa~S~~h~~~~~~~i~si~~~~P~-~--k~ilY~LgL~~~~i~~L~~~~~n--~evr~Fn~s~YP~ 126 (142)
T PF07801_consen 58 NSSDVVFVSATSDNHFNESMKSISSIRKFYPN-H--KIILYDLGLSEEQIKKLKKNFCN--VEVRKFNFSKYPK 126 (142)
T ss_pred cCCccEEEEEecchHHHHHHHHHHHHHHHCCC-C--cEEEEeCCCCHHHHHHHHhcCCc--eEEEECCCccCcH
Confidence 33567788888999999999999999999874 2 445555566655442 233454 5666777655443
No 54
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=29.48 E-value=2.7e+02 Score=21.66 Aligned_cols=29 Identities=10% Similarity=-0.008 Sum_probs=21.6
Q ss_pred hHhHHHHHHHHHhhcCCCCcEEEEEEeCCCC
Q 017643 102 LRGSIAAVHSILQHSTCPENIFFHFLVSDTN 132 (368)
Q Consensus 102 l~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~ 132 (368)
...+..++.|+.+... ....++++.++.+
T Consensus 9 ~~~l~~~l~s~~~~~~--~~~~i~i~~~~~~ 37 (156)
T cd00761 9 EPYLERCLESLLAQTY--PNFEVIVVDDGST 37 (156)
T ss_pred HHHHHHHHHHHHhCCc--cceEEEEEeCCCC
Confidence 4667888999998875 2477888887764
No 55
>PF11735 CAP59_mtransfer: Cryptococcal mannosyltransferase 1 ; InterPro: IPR021047 The capsule of pathogenic fungi is a complex polysaccharide whose formation is determined by a number of enzymes including, most importantly, alpha-1,3-mannosyltransferase 1 [, ]. It is responsible for addition of mannose residues in an alpha-1,3 linkage to a polymannosly precursor.
Probab=28.66 E-value=2.5e+02 Score=26.49 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=23.9
Q ss_pred CccchHhHHH-HHHHHHhhcCCCCcEEEEEEeCCC
Q 017643 98 DVEYLRGSIA-AVHSILQHSTCPENIFFHFLVSDT 131 (368)
Q Consensus 98 D~~yl~~~~v-~i~Sil~~~~~~~~i~fhvl~~~~ 131 (368)
+...++.... ++..+++.-. |+++.+-|+-++.
T Consensus 11 ~~~iL~~~~~~~ll~li~~LG-p~nv~vSIyE~~S 44 (241)
T PF11735_consen 11 NEDILPSLWGDALLELIRFLG-PENVFVSIYESGS 44 (241)
T ss_pred CHhHHHHHHHHHHHHHHHHhC-cCeEEEEEEeCCC
Confidence 4456766666 8888888876 5788877877664
No 56
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=26.52 E-value=4.4e+02 Score=23.07 Aligned_cols=97 Identities=16% Similarity=0.010 Sum_probs=48.0
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCCcceEEEEeChhhhhhccchhhhhhh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQLKFKVYYFDPEIVRNLISTSVRQAL 168 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~~ 168 (368)
|-|++.+=+.-...+..++.|++.-.-.++++.+.|+.++.+.+ +++++......++++..+.+. + ..
T Consensus 3 vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~~~~~~~~~~~~~~--~-~~------- 72 (234)
T cd06421 3 VDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELGVEYGYRYLTRPDNR--H-AK------- 72 (234)
T ss_pred eEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhhcccCceEEEeCCCC--C-Cc-------
Confidence 45555554332344677889998755433346777776665432 233322121123333222111 0 00
Q ss_pred cCchhhHHHhhhhhhccccCcEEEEecceeeecCh
Q 017643 169 EQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDI 203 (368)
Q Consensus 169 ~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI 203 (368)
...+...-+.. ..+-++++|+|.++..|-
T Consensus 73 ----~~~~n~~~~~a--~~d~i~~lD~D~~~~~~~ 101 (234)
T cd06421 73 ----AGNLNNALAHT--TGDFVAILDADHVPTPDF 101 (234)
T ss_pred ----HHHHHHHHHhC--CCCEEEEEccccCcCccH
Confidence 01111111222 369999999999997653
No 57
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family. This is a subfamily of nucleotidyl transferases. Nucleotidyl transferases transfer nucleotides onto phosphosugars. The activated sugars are precursors for synthesis of lipopolysaccharide, glycolipids and polysaccharides. Other subfamilies of nucleotidyl transferases include Alpha-D-Glucose-1-Phosphate Cytidylyltransferase, Mannose-1-phosphate guanyltransferase, and Glucose-1-phosphate thymidylyltransferase.
Probab=26.10 E-value=1.7e+02 Score=26.12 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=20.3
Q ss_pred CcEEEEecceeeecChHHHHhcc
Q 017643 188 RRVIYLDSDLVVVDDIAKLWTTS 210 (368)
Q Consensus 188 ~RVLYLD~D~IV~~DI~eL~~~d 210 (368)
+.++.+.+|+++..|+.++.+.-
T Consensus 98 ~~~lv~~~D~i~~~~~~~~~~~~ 120 (221)
T cd06422 98 EPFLVVNGDILWDGDLAPLLLLH 120 (221)
T ss_pred CCEEEEeCCeeeCCCHHHHHHHH
Confidence 67999999999999999988654
No 58
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=25.46 E-value=3.4e+02 Score=23.18 Aligned_cols=100 Identities=12% Similarity=0.084 Sum_probs=54.1
Q ss_pred eeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCH---HHHHHhhC-CCcceEEEEeChhhhhhccchhhhh
Q 017643 91 VHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNL---ETLVRSTF-PQLKFKVYYFDPEIVRNLISTSVRQ 166 (368)
Q Consensus 91 i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~---~~l~~~~f-~~l~i~~~~~d~~~~~~~is~~~~~ 166 (368)
+-|++.+-+.-+..+..++.||++.+.. ++.+.|+.++.+. +.+.++.. ....++++....+ .
T Consensus 3 vsiii~~~n~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~~~~~~~~~~~~~~~~~~---~-------- 69 (202)
T cd04184 3 ISIVMPVYNTPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLKKYAAQDPRIKVVFREEN---G-------- 69 (202)
T ss_pred EEEEEecccCcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHHHHHhcCCCEEEEEcccC---C--------
Confidence 4566666544467888999999987642 4677777666532 23333111 1112333322111 0
Q ss_pred hhcCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 167 ALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 167 ~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
....++...-+... -+=++++|+|.++..| +..+.+.
T Consensus 70 ----g~~~a~n~g~~~a~--~d~i~~ld~D~~~~~~~l~~~~~~ 107 (202)
T cd04184 70 ----GISAATNSALELAT--GEFVALLDHDDELAPHALYEVVKA 107 (202)
T ss_pred ----CHHHHHHHHHHhhc--CCEEEEECCCCcCChHHHHHHHHH
Confidence 01223333223332 4889999999999776 5555543
No 59
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=23.92 E-value=2.5e+02 Score=27.42 Aligned_cols=117 Identities=17% Similarity=0.203 Sum_probs=62.9
Q ss_pred CceeEEEEeCccchHhHHHHHHHHHhhcCC--CCcEEEEEEeCCCCHHHHHH--hhCCCcceEEEEeChhhhhhccc---
Q 017643 89 SLVHVAITLDVEYLRGSIAAVHSILQHSTC--PENIFFHFLVSDTNLETLVR--STFPQLKFKVYYFDPEIVRNLIS--- 161 (368)
Q Consensus 89 ~~i~I~~~~D~~yl~~~~v~i~Sil~~~~~--~~~i~fhvl~~~~~~~~l~~--~~f~~l~i~~~~~d~~~~~~~is--- 161 (368)
..|-|++-.+..-...+...+.+++..... .+++.||++........... ............+ ...+....+
T Consensus 25 GPiSvAvf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~H~v~~~~~~~~~~~~~~~~~~~~~~C~~~-~~~~~~~~~~~~ 103 (317)
T PF13896_consen 25 GPISVAVFVPGPDAKQALDAISYLLRCCCPRVRKNVTFHLVFPNSHFPTSCDSIEANLSSPFSCSDF-VRLLSELTSREN 103 (317)
T ss_pred CCEEEEEEecchhHHHHHHHHHHHHHhcCHHhHhhEEEEEEeecccCcccccccccccCCCCCcCch-hhhHHHHhhhhh
Confidence 467777777665555555566666533321 25799999988753221110 0000000000000 001111100
Q ss_pred -hhhhhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecChHHHHh
Q 017643 162 -TSVRQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDDIAKLWT 208 (368)
Q Consensus 162 -~~~~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~DI~eL~~ 208 (368)
.........|.|+.|...-+-.. -+-|+.+|.|++.-.++.+-+.
T Consensus 104 ~~~~~~~~~YPiN~LRNvAr~~a~--T~~v~~~DvD~~ps~~l~~~l~ 149 (317)
T PF13896_consen 104 NYDPAPNALYPINLLRNVARSGAR--TDYVFLLDVDFLPSPGLYEKLL 149 (317)
T ss_pred hcccccCCCCChHHHHHHHHHhcC--cceEEEecceeeeCcchHHHHH
Confidence 00112234578999988766554 6999999999999999988553
No 60
>PRK11204 N-glycosyltransferase; Provisional
Probab=23.59 E-value=4.1e+02 Score=26.38 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=52.8
Q ss_pred ceeEEEEeCccchHhHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHH---hhCCCcceEEEEeChhhhhhccchhh
Q 017643 90 LVHVAITLDVEYLRGSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVR---STFPQLKFKVYYFDPEIVRNLISTSV 164 (368)
Q Consensus 90 ~i~I~~~~D~~yl~~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~---~~f~~l~i~~~~~d~~~~~~~is~~~ 164 (368)
.+-|++.+=++ ...+..++.|+++.+- | ++.+.|+.|+.+++ ++++ +.+++ +++.....+ .++
T Consensus 55 ~vsViIp~yne-~~~i~~~l~sl~~q~y-p-~~eiiVvdD~s~d~t~~~l~~~~~~~~~--v~~i~~~~n--~Gk----- 122 (420)
T PRK11204 55 GVSILVPCYNE-GENVEETISHLLALRY-P-NYEVIAINDGSSDNTGEILDRLAAQIPR--LRVIHLAEN--QGK----- 122 (420)
T ss_pred CEEEEEecCCC-HHHHHHHHHHHHhCCC-C-CeEEEEEECCCCccHHHHHHHHHHhCCc--EEEEEcCCC--CCH-----
Confidence 46676665332 2456778889887543 2 57888887775432 2222 33443 344332211 011
Q ss_pred hhhhcCchhhHHHhhhhhhccccCcEEEEecceeeecC-hHHHHhc
Q 017643 165 RQALEQPLNYARNYLADLLEPCVRRVIYLDSDLVVVDD-IAKLWTT 209 (368)
Q Consensus 165 ~~~~~s~~~y~Rl~l~~llp~~v~RVLYLD~D~IV~~D-I~eL~~~ 209 (368)
..++-..-+.- ..|-++.+|+|.++..| +.++.+.
T Consensus 123 --------a~aln~g~~~a--~~d~i~~lDaD~~~~~d~L~~l~~~ 158 (420)
T PRK11204 123 --------ANALNTGAAAA--RSEYLVCIDGDALLDPDAAAYMVEH 158 (420)
T ss_pred --------HHHHHHHHHHc--CCCEEEEECCCCCCChhHHHHHHHH
Confidence 01111111111 36899999999999887 5556544
No 61
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=22.65 E-value=6.4e+02 Score=23.62 Aligned_cols=91 Identities=19% Similarity=0.151 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhhcCCCCcEEEEEEeCCCCHH--HHHHhhCCCcceEEEEeChhhhhhccchhhhhhhcCchhhHHHhhhh
Q 017643 104 GSIAAVHSILQHSTCPENIFFHFLVSDTNLE--TLVRSTFPQLKFKVYYFDPEIVRNLISTSVRQALEQPLNYARNYLAD 181 (368)
Q Consensus 104 ~~~v~i~Sil~~~~~~~~i~fhvl~~~~~~~--~l~~~~f~~l~i~~~~~d~~~~~~~is~~~~~~~~s~~~y~Rl~l~~ 181 (368)
-+...+.|+.+... +.++.|.|+-++.+.+ +.+.+......+..+...... ...++ .+-+|....+
T Consensus 18 ~l~~~l~~l~~~~~-~~~~eiIvvd~~s~~~~~~~l~~~~~~~~~~~~i~~~~~-~~~f~----------~a~arN~g~~ 85 (281)
T PF10111_consen 18 RLRNCLESLSQFQS-DPDFEIIVVDDGSSDEFDEELKKLCEKNGFIRYIRHEDN-GEPFS----------RAKARNIGAK 85 (281)
T ss_pred HHHHHHHHHHhcCC-CCCEEEEEEECCCchhHHHHHHHHHhccCceEEEEcCCC-CCCcC----------HHHHHHHHHH
Confidence 44455666666444 3568887777766433 222222222222212111110 00111 2455666656
Q ss_pred hhccccCcEEEEecceeeecCh-HHHHh
Q 017643 182 LLEPCVRRVIYLDSDLVVVDDI-AKLWT 208 (368)
Q Consensus 182 llp~~v~RVLYLD~D~IV~~DI-~eL~~ 208 (368)
.-. -+-++++|+|+++-.|. .++.+
T Consensus 86 ~A~--~d~l~flD~D~i~~~~~i~~~~~ 111 (281)
T PF10111_consen 86 YAR--GDYLIFLDADCIPSPDFIEKLLN 111 (281)
T ss_pred HcC--CCEEEEEcCCeeeCHHHHHHHHH
Confidence 654 58999999999998754 34454
Done!