Query 017646
Match_columns 368
No_of_seqs 410 out of 1809
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 17:48:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017646.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017646hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h6l_A Histone-lysine N-methyl 100.0 1.1E-58 3.6E-63 442.5 15.9 238 22-259 13-263 (278)
2 3ooi_A Histone-lysine N-methyl 100.0 1E-56 3.4E-61 419.1 17.7 217 37-253 13-232 (232)
3 3ope_A Probable histone-lysine 100.0 4E-55 1.4E-59 405.8 21.4 213 43-258 2-219 (222)
4 1mvh_A Cryptic LOCI regulator 100.0 2E-50 6.8E-55 389.4 19.8 237 10-254 11-299 (299)
5 3bo5_A Histone-lysine N-methyl 100.0 8E-49 2.7E-53 376.7 19.0 232 20-255 16-288 (290)
6 2r3a_A Histone-lysine N-methyl 100.0 1.8E-48 6.1E-53 375.7 18.3 240 9-253 22-300 (300)
7 1ml9_A Histone H3 methyltransf 100.0 9.9E-49 3.4E-53 378.4 14.2 227 26-253 8-302 (302)
8 3hna_A Histone-lysine N-methyl 100.0 4.6E-49 1.6E-53 377.8 11.5 219 20-251 34-287 (287)
9 2w5y_A Histone-lysine N-methyl 100.0 1.1E-39 3.8E-44 295.6 10.8 150 102-252 40-191 (192)
10 3f9x_A Histone-lysine N-methyl 100.0 1.5E-34 5E-39 255.6 11.8 132 104-235 20-155 (166)
11 2f69_A Histone-lysine N-methyl 100.0 5.7E-29 2E-33 235.3 12.7 141 88-235 83-235 (261)
12 1n3j_A A612L, histone H3 lysin 100.0 4.6E-29 1.6E-33 209.2 7.0 110 113-237 3-112 (119)
13 3s8p_A Histone-lysine N-methyl 99.9 1.5E-28 5.1E-33 232.4 4.6 135 114-255 131-271 (273)
14 1h3i_A Histone H3 lysine 4 spe 99.9 6.5E-27 2.2E-31 224.6 11.3 117 113-235 162-289 (293)
15 2qpw_A PR domain zinc finger p 99.9 7.1E-27 2.4E-31 203.4 7.3 111 111-236 26-147 (149)
16 3rq4_A Histone-lysine N-methyl 99.9 4.2E-25 1.4E-29 206.7 6.1 130 114-251 103-238 (247)
17 3ep0_A PR domain zinc finger p 99.8 9.4E-20 3.2E-24 161.5 9.9 112 112-235 25-148 (170)
18 3db5_A PR domain zinc finger p 99.8 2.4E-19 8.4E-24 156.2 8.1 113 113-235 22-144 (151)
19 3dal_A PR domain zinc finger p 99.7 2.5E-18 8.7E-23 155.4 7.0 111 113-235 57-178 (196)
20 3ray_A PR domain-containing pr 99.6 1.6E-16 5.5E-21 146.8 6.3 137 114-267 72-218 (237)
21 3ihx_A PR domain zinc finger p 99.5 5.9E-15 2E-19 128.5 5.4 102 115-234 24-142 (152)
22 3n71_A Histone lysine methyltr 99.3 1.1E-11 3.8E-16 126.7 9.7 62 187-250 200-281 (490)
23 3qww_A SET and MYND domain-con 99.1 3.4E-10 1.2E-14 114.0 11.3 45 187-235 201-245 (433)
24 3qwp_A SET and MYND domain-con 98.8 9.5E-10 3.3E-14 110.4 2.2 62 186-251 200-270 (429)
25 2l8d_A Lamin-B receptor; DNA b 97.8 5.8E-05 2E-09 55.1 6.2 43 315-357 11-54 (66)
26 2dig_A Lamin-B receptor; tudor 97.7 8.1E-05 2.8E-09 54.4 6.1 43 315-357 14-57 (68)
27 3qii_A PHD finger protein 20; 97.7 9.2E-05 3.2E-09 57.4 6.6 47 311-359 19-66 (85)
28 3p8d_A Medulloblastoma antigen 97.5 0.00023 7.9E-09 52.9 6.4 45 314-360 7-52 (67)
29 1mhn_A SurviVal motor neuron p 97.3 0.00063 2.2E-08 49.1 6.5 45 316-360 6-52 (59)
30 2g3r_A Tumor suppressor P53-bi 97.2 0.00045 1.5E-08 56.6 5.5 44 313-357 4-48 (123)
31 4a4f_A SurviVal of motor neuro 97.1 0.001 3.5E-08 48.8 6.5 45 316-360 11-57 (64)
32 3s6w_A Tudor domain-containing 97.1 0.0012 4.2E-08 46.6 6.5 45 316-360 4-50 (54)
33 2equ_A PHD finger protein 20-l 97.1 0.00082 2.8E-08 51.0 5.8 43 315-359 11-54 (74)
34 3qxy_A N-lysine methyltransfer 97.0 0.00041 1.4E-08 69.8 4.3 42 187-232 222-263 (449)
35 2h21_A Ribulose-1,5 bisphospha 96.9 0.00049 1.7E-08 68.8 3.8 47 187-233 189-242 (440)
36 1g5v_A SurviVal motor neuron p 96.9 0.0024 8.3E-08 50.0 6.7 46 315-360 12-59 (88)
37 1ssf_A Transformation related 96.8 0.0023 7.9E-08 54.6 6.3 44 314-358 9-53 (156)
38 3pnw_C Tudor domain-containing 96.6 0.0061 2.1E-07 46.4 6.9 45 316-360 20-66 (77)
39 2ldm_A Uncharacterized protein 95.6 0.00038 1.3E-08 53.6 0.0 42 316-359 9-51 (81)
40 2d9t_A Tudor domain-containing 96.5 0.0056 1.9E-07 46.7 6.5 46 315-360 11-58 (78)
41 3smt_A Histone-lysine N-methyl 96.2 0.0028 9.5E-08 64.6 3.8 43 187-232 272-314 (497)
42 2eqj_A Metal-response element- 96.1 0.014 4.7E-07 42.9 6.4 45 314-359 14-59 (66)
43 2eqk_A Tudor domain-containing 94.7 0.048 1.6E-06 42.1 5.4 45 316-360 24-69 (85)
44 3fdr_A Tudor and KH domain-con 93.2 0.19 6.3E-06 39.1 6.3 45 315-360 29-75 (94)
45 4hcz_A PHD finger protein 1; p 93.1 0.32 1.1E-05 34.6 6.5 43 316-359 6-49 (58)
46 2diq_A Tudor and KH domain-con 91.5 0.24 8.1E-06 39.7 5.0 44 316-360 35-80 (110)
47 2xk0_A Polycomb protein PCL; t 89.8 1.7 5.7E-05 32.0 7.7 46 312-360 14-60 (69)
48 2wac_A CG7008-PA; unknown func 89.0 0.72 2.5E-05 40.8 6.5 43 316-360 54-98 (218)
49 3qwp_A SET and MYND domain-con 88.9 0.37 1.3E-05 47.7 5.0 36 113-148 4-39 (429)
50 2m0o_A PHD finger protein 1; t 88.3 3.6 0.00012 30.8 8.7 48 311-359 24-72 (79)
51 2e5p_A Protein PHF1, PHD finge 83.0 3.7 0.00013 30.0 6.3 44 315-359 11-55 (68)
52 3ntk_A Maternal protein tudor; 81.9 2.2 7.5E-05 36.6 5.8 41 315-356 49-91 (169)
53 2hqx_A P100 CO-activator tudor 81.4 2.2 7.6E-05 38.6 6.0 42 316-359 68-111 (246)
54 2xdp_A Lysine-specific demethy 80.1 2.5 8.7E-05 34.7 5.2 46 316-364 67-112 (123)
55 2qqr_A JMJC domain-containing 80.1 3.9 0.00013 33.3 6.3 48 316-366 66-113 (118)
56 3smt_A Histone-lysine N-methyl 78.0 1.8 6.2E-05 43.7 4.6 32 115-146 94-125 (497)
57 4b9w_A TDRD1, tudor domain-con 77.7 4 0.00014 35.9 6.2 44 316-360 68-113 (201)
58 4b9x_A TDRD1, tudor domain-con 73.8 4.6 0.00016 36.1 5.7 44 316-360 68-113 (226)
59 2e5q_A PHD finger protein 19; 73.5 9.8 0.00033 27.3 6.0 43 316-359 10-53 (63)
60 1y96_A Gemin6, SIP2, GEM-assoc 69.9 3.9 0.00013 31.5 3.5 32 313-344 13-44 (86)
61 2qqr_A JMJC domain-containing 67.8 4.6 0.00016 32.9 3.8 38 315-354 7-45 (118)
62 3qxy_A N-lysine methyltransfer 67.5 3.4 0.00011 41.1 3.5 33 115-147 39-72 (449)
63 3h8z_A FragIle X mental retard 65.6 16 0.00053 30.2 6.6 45 313-359 60-112 (128)
64 4emk_A U6 snRNA-associated SM- 65.0 2 6.9E-05 33.6 1.1 35 309-343 22-56 (94)
65 1n9r_A SMF, small nuclear ribo 64.3 5.9 0.0002 30.7 3.6 37 308-344 22-59 (93)
66 1i4k_A Putative snRNP SM-like 62.9 8.9 0.00031 28.2 4.3 32 312-343 9-40 (77)
67 1mgq_A SM-like protein; LSM, R 62.6 6.5 0.00022 29.6 3.5 36 309-344 17-52 (83)
68 3bdl_A Staphylococcal nuclease 60.9 11 0.00037 38.6 5.9 43 316-360 414-458 (570)
69 4emh_A Probable U6 snRNA-assoc 60.7 7.5 0.00026 30.9 3.7 36 309-344 18-53 (105)
70 3dlm_A Histone-lysine N-methyl 58.5 17 0.00057 32.5 5.9 46 315-360 70-120 (213)
71 2xdp_A Lysine-specific demethy 57.6 3.8 0.00013 33.6 1.5 38 315-354 8-46 (123)
72 1h64_1 SnRNP SM-like protein; 54.0 14 0.00049 26.9 4.1 31 313-343 10-40 (75)
73 3s6n_F Small nuclear ribonucle 53.9 12 0.00042 28.4 3.8 34 311-344 10-43 (86)
74 4emk_B U6 snRNA-associated SM- 53.1 13 0.00043 27.3 3.7 31 313-343 10-40 (75)
75 3bw1_A SMX4 protein, U6 snRNA- 51.8 11 0.00038 29.2 3.3 32 311-342 14-45 (96)
76 1i8f_A Putative snRNP SM-like 51.6 12 0.00042 27.8 3.4 33 311-343 15-47 (81)
77 1d3b_B Protein (small nuclear 51.3 21 0.00072 27.1 4.8 34 310-343 7-40 (91)
78 2h21_A Ribulose-1,5 bisphospha 50.6 10 0.00035 37.2 3.6 24 123-146 31-54 (440)
79 3s6n_G Small nuclear ribonucle 49.2 19 0.00066 26.4 4.1 36 309-344 6-41 (76)
80 1wvo_A Sialic acid synthase; a 48.4 5.8 0.0002 29.8 1.1 17 213-229 8-24 (79)
81 2l7y_A Putative endo-beta-N-ac 47.0 23 0.00079 27.8 4.4 43 319-363 8-51 (98)
82 4emg_A Probable U6 snRNA-assoc 46.9 16 0.00055 28.1 3.5 34 310-343 12-45 (93)
83 1ljo_A Archaeal SM-like protei 46.5 22 0.00076 26.1 4.1 31 313-343 11-42 (77)
84 1b34_A Protein (small nuclear 45.9 23 0.00078 28.5 4.4 32 313-344 8-39 (119)
85 1th7_A SnRNP-2, small nuclear 45.6 18 0.00063 26.8 3.6 32 312-343 14-45 (81)
86 4emk_C U6 snRNA-associated SM- 43.8 20 0.0007 28.7 3.7 34 310-343 26-59 (113)
87 2fhd_A RAD9 homolog, DNA repai 42.7 68 0.0023 27.0 6.8 44 315-358 7-56 (153)
88 1t2y_A Metallothionein, MT; pr 40.0 16 0.00056 21.5 1.8 18 68-87 3-20 (26)
89 1m5q_A SMAP3, small nuclear ri 36.4 34 0.0012 28.1 4.0 32 313-344 6-37 (130)
90 2lcd_A AT-rich interactive dom 41.3 8.1 0.00028 31.2 0.0 41 315-357 58-99 (118)
91 1c9o_A CSPB, cold-shock protei 34.0 46 0.0016 23.6 4.0 21 331-351 3-23 (66)
92 2rnz_A Histone acetyltransfera 33.3 1.4E+02 0.0047 23.1 6.8 54 297-352 9-65 (94)
93 1h95_A CSD, Y-box binding prot 32.4 49 0.0017 24.5 4.0 27 329-355 8-34 (79)
94 1d3b_A Protein (small nuclear 32.3 50 0.0017 24.1 4.0 34 311-344 9-42 (75)
95 2lcc_A AT-rich interactive dom 32.3 45 0.0015 24.7 3.8 37 314-350 6-47 (76)
96 2lua_A Protein MALE-specific l 31.8 30 0.001 23.8 2.4 40 65-106 4-46 (52)
97 2y9a_D Small nuclear ribonucle 31.5 1.1E+02 0.0039 24.7 6.5 44 311-354 9-56 (126)
98 2k5n_A Putative cold-shock pro 31.0 85 0.0029 22.9 5.1 27 331-357 4-30 (74)
99 3dlm_A Histone-lysine N-methyl 30.1 79 0.0027 28.2 5.6 43 316-359 11-56 (213)
100 3cam_A Cold-shock domain famil 29.8 61 0.0021 23.1 4.1 25 331-355 3-27 (67)
101 1igq_A Transcriptional repress 28.6 69 0.0023 22.9 4.0 26 340-365 32-58 (62)
102 3a0j_A Cold shock protein; OB- 28.5 57 0.002 23.7 3.8 21 331-351 3-23 (73)
103 3i2z_B RNA chaperone, negative 27.8 59 0.002 23.5 3.7 27 330-356 6-32 (71)
104 1b34_B Protein (small nuclear 27.7 52 0.0018 26.3 3.7 31 313-343 33-65 (118)
105 3pgw_B SM B; protein-RNA compl 27.3 46 0.0016 30.1 3.6 32 311-342 8-39 (231)
106 2eko_A Histone acetyltransfera 27.2 1.1E+02 0.0037 23.3 5.3 40 313-352 9-54 (87)
107 1wgs_A MYST histone acetyltran 27.1 73 0.0025 26.1 4.6 36 314-350 13-53 (133)
108 2ro0_A Histone acetyltransfera 26.6 1.6E+02 0.0056 22.4 6.3 37 314-352 24-63 (92)
109 2yrv_A AT-rich interactive dom 26.5 69 0.0024 25.8 4.1 33 306-338 3-37 (117)
110 2kcm_A Cold shock domain famil 26.4 57 0.002 23.9 3.4 20 332-351 3-22 (74)
111 2yty_A Cold shock domain-conta 26.0 62 0.0021 24.5 3.7 33 319-353 6-40 (88)
112 3aqq_A Calcium-regulated heat 25.3 73 0.0025 26.7 4.3 30 325-354 58-87 (147)
113 1n3j_A A612L, histone H3 lysin 25.2 29 0.00099 27.4 1.7 20 211-231 15-34 (119)
114 1g6p_A Cold shock protein TMCS 25.1 48 0.0016 23.6 2.7 20 332-351 3-22 (66)
115 3k3s_A Altronate hydrolase; st 22.9 47 0.0016 26.3 2.5 17 213-229 33-49 (105)
116 1rju_V Metallothionein; Cu(I)- 22.4 47 0.0016 20.4 1.8 6 80-85 16-21 (36)
117 2bh8_A 1B11; transcription, mo 22.1 78 0.0027 24.4 3.7 27 329-355 16-42 (101)
118 2r41_A Uncharacterized protein 21.2 69 0.0024 25.6 3.1 30 333-362 78-107 (110)
No 1
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=100.00 E-value=1.1e-58 Score=442.48 Aligned_cols=238 Identities=35% Similarity=0.684 Sum_probs=202.0
Q ss_pred HhhCCCeEEeCCCCC-----CCCCCCCcEEccceeeccccccccC--CCCCccccccCCCC-----CCCCCCCCCCccce
Q 017646 22 KQIGNPVEFELPDWF-----IKPKAIPYVFIKRNIYLTKRIKRRL--EDDGIFCSCTASPG-----SSGVCDRDCHCGML 89 (368)
Q Consensus 22 ~~~~~~~~f~lp~~~-----~~~~p~~f~~i~~n~~~~~~~~~~~--~~~~~~C~C~~~~~-----~~~~C~~~C~c~~~ 89 (368)
..+-...+|++|..+ ....||.|++|++|+|+..+.+... ..+.+.|+|.+... +...|+.+|+|+++
T Consensus 13 ~~~~~~~~f~~~~~~~~~~~~~~~p~~~~~i~~n~y~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~~~~~C~~~C~nr~~ 92 (278)
T 3h6l_A 13 GPSCVMDDFRDPQRWKECAKQGKMPCYFDLIEENVYLTERKKNKSHRDIKRMQCECTPLSKDERAQGEIACGEDCLNRLL 92 (278)
T ss_dssp -CEEEGGGGGCHHHHHHHHHTTSSCCCCEECSSCEECC--------------CCCCCCCCHHHHHHTCCSSCTTCTTGGG
T ss_pred ecccChhhcCCcHHHHHHHhcccCCCCceEeeeeeccccccccccccccccceeeccCCCcccccccCCCCCCCCCCcce
Confidence 333445667777655 2457999999999999976433222 23468999998542 34689999999999
Q ss_pred eeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCccee
Q 017646 90 LSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFY 169 (368)
Q Consensus 90 ~~eC~~~C~C~~~C~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y 169 (368)
++||++.|.|+..|+||++|++...+++|++++++||||||+++|++|+||+||+|+||+..++.+|...+......++|
T Consensus 93 ~~EC~~~C~C~~~C~Nr~~q~g~~~~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~~~~~y 172 (278)
T 3h6l_A 93 MIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYY 172 (278)
T ss_dssp TBCCCTTCTTGGGCSSCTTTTTCCCCEEEEECSSSCEEEEESSCBCTTCEEEECCCEEECHHHHHHHHHHHHHTTCCCCC
T ss_pred EeccCCCCCcCCCCCCccccCCCccCEEEEEcCCCceEEEeCCccCCCCEeEEeeeeecCHHHHHHHHHHHHhccCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887776677889
Q ss_pred EeeecccccccccccCCccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC-CceeecCCCCC
Q 017646 170 LCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGC 248 (368)
Q Consensus 170 ~~~~~~~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~C 248 (368)
++.++.+.+|||+.+||++|||||||+|||.++.|.+++.++|+|||+|||++||||||||++..|+. .+.|+||+++|
T Consensus 173 ~~~l~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~C 252 (278)
T 3h6l_A 173 FMALKNDEIIDATQKGNCSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANC 252 (278)
T ss_dssp EEEEETTEEEECSSEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECSSCEECCCCCTTC
T ss_pred eecccCCeEEeCcccCChhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCCCCcEeECCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998865 58999999999
Q ss_pred ccccCCCCCCC
Q 017646 249 RRKLGAKPSKP 259 (368)
Q Consensus 249 rg~l~~~~~~~ 259 (368)
||+|+++...+
T Consensus 253 rg~l~~~~~~~ 263 (278)
T 3h6l_A 253 RGYLGGENRVS 263 (278)
T ss_dssp CSEECCC----
T ss_pred eeecCCCCcCC
Confidence 99999876544
No 2
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=100.00 E-value=1e-56 Score=419.12 Aligned_cols=217 Identities=38% Similarity=0.698 Sum_probs=197.0
Q ss_pred CCCCCCCcEEccceeecccccc-ccCCCCCccccccCCCCCCCCCCCCCCccceeeeCCC-CCCCCCCCCCccCccCCcc
Q 017646 37 IKPKAIPYVFIKRNIYLTKRIK-RRLEDDGIFCSCTASPGSSGVCDRDCHCGMLLSSCSS-GCKCGNSCLNKPFQNRPVK 114 (368)
Q Consensus 37 ~~~~p~~f~~i~~n~~~~~~~~-~~~~~~~~~C~C~~~~~~~~~C~~~C~c~~~~~eC~~-~C~C~~~C~Nr~~q~~~~~ 114 (368)
...+||+|++|++|+++..... ....++...|+|++.+.+.++|+.+|+|+++++||++ .|+|+..|+||++|++...
T Consensus 13 ~~~~pp~y~~i~~n~~~~~~~~~~~~~~~~~~C~C~~~~~~~C~~~~~C~nr~~~~EC~~~~C~c~~~C~Nr~~q~~~~~ 92 (232)
T 3ooi_A 13 NDKKPPPYKHIKVNRPIGRVQIFTADLSEIPRCNCKATDENPCGIDSECINRMLLYECHPTVCPAGGRCQNQCFSKRQYP 92 (232)
T ss_dssp HCCSCCCCEECSSCEECTTCCCCCCCGGGSCCCSCCTTSSSTTCTTSCCHHHHTTBCCCTTTCTTGGGCCCCHHHHTCCC
T ss_pred cCCCCCCceEeeccccccccccccCCcccCCcccccCCCCCCCCCCCCCcCcCceeEeCCCCCCCCCCcCCccccCCCCc
Confidence 3678999999999999875322 2334567899999876655556688999999999998 6999999999999999999
Q ss_pred cEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccccccCCccccccCC
Q 017646 115 KMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYINHS 194 (368)
Q Consensus 115 ~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa~~~Gn~aRfINHS 194 (368)
+++|++++++||||||+++|++|++|+||+|+|++.+++.+|...+......++|++.++.+++|||+.+||+|||||||
T Consensus 93 ~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHS 172 (232)
T 3ooi_A 93 EVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELIDEEECRARIRYAQEHDITNFYMLTLDKDRIIDAGPKGNYARFMNHC 172 (232)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHHHHHHTTCCCCCEEEEETTEEEEEEEEECGGGGCEEC
T ss_pred cEEEEEcCCceeEEEECceecCCceeeEeeeeccCHHHHHHHHHHHhhcCCCceeeeecCcceEEecccccccccccccc
Confidence 99999999999999999999999999999999999999998877666666778899999999999999999999999999
Q ss_pred CCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC-CceeecCCCCCccccC
Q 017646 195 CCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRKLG 253 (368)
Q Consensus 195 C~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~l~ 253 (368)
|+||+.++.|.+++.++|+|||+|||++||||||||++++++. .+.|+||+++|||+||
T Consensus 173 C~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~C~CGs~~CrG~lG 232 (232)
T 3ooi_A 173 CQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGNGKTVCKCGAPNCSGFLG 232 (232)
T ss_dssp SSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTCTTCBCCCCCTTCCSBCC
T ss_pred CCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCCCCcEeECCCCcCcCcCC
Confidence 9999999999999999999999999999999999999998865 4899999999999997
No 3
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=100.00 E-value=4e-55 Score=405.83 Aligned_cols=213 Identities=36% Similarity=0.744 Sum_probs=187.2
Q ss_pred CcEEccceeeccccccccCCCCCccccccCCCC-CCCCCCCCCCccceeeeCCC-CCCCCCCCCCccCccCCcc-cEEEE
Q 017646 43 PYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPG-SSGVCDRDCHCGMLLSSCSS-GCKCGNSCLNKPFQNRPVK-KMKLV 119 (368)
Q Consensus 43 ~f~~i~~n~~~~~~~~~~~~~~~~~C~C~~~~~-~~~~C~~~C~c~~~~~eC~~-~C~C~~~C~Nr~~q~~~~~-~l~v~ 119 (368)
.|++|++|+|+..+ .....+.+.|+|++.+. ...+|+++|+|+++++||++ .|+|+..|+||++|++... +++|+
T Consensus 2 ~~~~i~~n~~~~~~--~~~~~~~~~C~C~~~~~~~~~~c~~~C~nr~~~~EC~~~~C~C~~~C~Nr~~q~~~~~~~lev~ 79 (222)
T 3ope_A 2 SYKKIRSNVYVDVK--PLSGYEATTCNCKKPDDDTRKGCVDDCLNRMIFAECSPNTCPCGEQCCNQRIQRHEWVQCLERF 79 (222)
T ss_dssp CCEECSSCEECSCC--CBCCCCCCCCCCCCCSCSSSCSSCSCCTTGGGTBCCCTTTCTTTTSCSSCTTTTTCCCSCCEEE
T ss_pred CccCcccceeeeec--cCccccCccccCcCCCcCCCCCCcccCcCcCeEeEeCCCCCcCCCCCCCceEeCCCccccEEEE
Confidence 69999999998854 33456789999997643 35689999999999999998 7999999999999998765 59999
Q ss_pred EecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccccccCCccccccCCCCCCc
Q 017646 120 QTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNT 199 (368)
Q Consensus 120 ~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa~~~Gn~aRfINHSC~PN~ 199 (368)
+++++||||||+++|++|+||+||+|+|++.+++.+|...... ...+.|+|.++.+++|||+.+||+||||||||+||+
T Consensus 80 ~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~-~~~~~y~~~l~~~~~IDa~~~Gn~aRfiNHSC~PN~ 158 (222)
T 3ope_A 80 RAEEKGWGIRTKEPLKAGQFIIEYLGEVVSEQEFRNRMIEQYH-NHSDHYCLNLDSGMVIDSYRMGNEARFINHSCDPNC 158 (222)
T ss_dssp ECTTSSEEEECSSCBCTTCEEEECCSEEECHHHHHHHHHHTST-TCCSCCEEEEETTEEEECSSEECGGGGCEECSSCSE
T ss_pred EcCCCceEEEECceECCCCEEEEecceecCHHHHHHHHHHHhc-ccCCeEEEecCCCEEEeCccccccceeeccCCCCCe
Confidence 9999999999999999999999999999999998888654332 234568999999999999999999999999999999
Q ss_pred ceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC--CceeecCCCCCccccCCCCCC
Q 017646 200 EMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA--DQDCHCGAAGCRRKLGAKPSK 258 (368)
Q Consensus 200 ~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~--~~~C~Cgs~~Crg~l~~~~~~ 258 (368)
.++.|.+++.++++|||+|||++||||||||++..|+. .+.|+||+++|||+|+++++.
T Consensus 159 ~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~~~~~~C~CGs~~Crg~i~~~~q~ 219 (222)
T 3ope_A 159 EMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNVEKQQLCKCGFEKCRGIIGGKSQR 219 (222)
T ss_dssp EEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCCSCCCBCCCCCTTCCSBCC-----
T ss_pred EeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCCcCCCEeeCCCcCCCCccCCCCcc
Confidence 99999999999999999999999999999999998864 589999999999999998654
No 4
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=100.00 E-value=2e-50 Score=389.42 Aligned_cols=237 Identities=26% Similarity=0.426 Sum_probs=177.0
Q ss_pred hhhHHHHHHHHHHhhCCCeEEeCCCCCCCCCCC--CcEEccceeeccccccccCCCCCccccccCCCCCCCCCCC----C
Q 017646 10 NSRIGHAFNKLLKQIGNPVEFELPDWFIKPKAI--PYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPGSSGVCDR----D 83 (368)
Q Consensus 10 ~~~~~~~~~~l~~~~~~~~~f~lp~~~~~~~p~--~f~~i~~n~~~~~~~~~~~~~~~~~C~C~~~~~~~~~C~~----~ 83 (368)
....+.+|+..++.+ |.+++.+-+.++..+|| .|+||.++++.... .........+|+|... ..|.. +
T Consensus 11 ~~~~~~~~~~~~~g~-e~~pi~~~N~vd~~~~p~~~F~Yi~~~~~~~~~-~~~~~~~~~gC~C~~~----~~C~~~~~~~ 84 (299)
T 1mvh_A 11 FYEKRELFRKKLREI-EGPEVTLVNEVDDEPCPSLDFQFISQYRLTQGV-IPPDPNFQSGCNCSSL----GGCDLNNPSR 84 (299)
T ss_dssp HHHHHHHHHHHHHTS-SSSCEEEECSSCCCCCSCCCSEECSSCEECTTC-CCCCGGGCCCCCCCCS----SSSCTTCTTT
T ss_pred hhHHHHHHHHHHcCc-CCCCEEEEeCCCCCCCCCCCcEEccceecCCCc-CcCCCcCCCCCcCcCC----CCcCCCCCCC
Confidence 345678899888877 66777776777666555 49999999985442 2222233478999851 12432 3
Q ss_pred CCcc----------------------ceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEE
Q 017646 84 CHCG----------------------MLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVI 141 (368)
Q Consensus 84 C~c~----------------------~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ 141 (368)
|.|. .+++||++.|.|+..|+||++|++...+++|++++.+||||||+++|++|+||+
T Consensus 85 C~C~~~~~~~~~~~y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~~G~Gv~A~~~I~kG~~I~ 164 (299)
T 1mvh_A 85 CECLDDLDEPTHFAYDAQGRVRADTGAVIYECNSFCSCSMECPNRVVQRGRTLPLEIFKTKEKGWGVRSLRFAPAGTFIT 164 (299)
T ss_dssp CSSSTTCCSSCCCSBCTTSSBCTTCCSEEECCCTTSCSCTTCTTCTGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEE
T ss_pred CccccccccccccccCCCCceeecCCCCeEeCCCCCCCCCCcCCccccccccccEEEEEcCCCcceEeeCceeCCCCEEE
Confidence 4442 247999999999999999999999999999999999999999999999999999
Q ss_pred EEcceeechhhHHHHHHHhhhcCCcceeEeeecc-----cccccccccCCccccccCCCCCCcceeEEEEC----CeEEE
Q 017646 142 EYVGEVIDDQTCEERLWKMKHLGETNFYLCEINR-----DMVIDATYKGNKSRYINHSCCPNTEMQKWIID----GETRI 212 (368)
Q Consensus 142 ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~-----~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~----g~~ri 212 (368)
||+|||++.+++++|...+... ...|+|.++. .++|||+.+||+||||||||+||+.++.+..+ +.++|
T Consensus 165 EY~Gevi~~~ea~~R~~~y~~~--~~~Y~f~l~~~~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i 242 (299)
T 1mvh_A 165 CYLGEVITSAEAAKRDKNYDDD--GITYLFDLDMFDDASEYTVDAQNYGDVSRFFNHSCSPNIAIYSAVRNHGFRTIYDL 242 (299)
T ss_dssp ECCCEEEEHHHHHHHHTTCCSC--SCCCEEEECSSCSSSCEEEECSSEECGGGGCEECSSCSEEEEEEESCTTCTTSCEE
T ss_pred EeeeEECcHHHHHHHHHhhhcc--CceEEEEecCCCCCccEEEeCcccCChhheEeecCCCCeEEEEEEeecCCCCceEE
Confidence 9999999999998887655332 3468888764 58999999999999999999999998766654 35899
Q ss_pred EEEEccCCCCCCeEEEecCCCCCC--------------C-CceeecCCCCCccccCC
Q 017646 213 GIFATRDIKKGENLTYDYQFVQFG--------------A-DQDCHCGAAGCRRKLGA 254 (368)
Q Consensus 213 ~i~A~RdI~~GEELT~dY~~~~~~--------------~-~~~C~Cgs~~Crg~l~~ 254 (368)
+|||+|||++||||||||++.++. . .+.|+||+++|||+|.+
T Consensus 243 ~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~~~~~~~~k~~~~C~CGs~~Crg~l~g 299 (299)
T 1mvh_A 243 AFFAIKDIQPLEELTFDYAGAKDFSPVQSQKSQQNRISKLRRQCKCGSANCRGWLFG 299 (299)
T ss_dssp EEEESSCBCTTCBCEECCCTTSSSSCCC-----------------------------
T ss_pred EEEEccCcCCCCEEEEEcCCcccccccccccccccccccCCcCcCCCCCCCccccCC
Confidence 999999999999999999988771 1 26999999999999864
No 5
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=100.00 E-value=8e-49 Score=376.74 Aligned_cols=232 Identities=25% Similarity=0.399 Sum_probs=182.2
Q ss_pred HHHhhCCCeEEeCCCCCCCCCCCCcEEccceeeccccccccCCCCCccccccCC-CC-CCCCCC--------CCCC----
Q 017646 20 LLKQIGNPVEFELPDWFIKPKAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTAS-PG-SSGVCD--------RDCH---- 85 (368)
Q Consensus 20 l~~~~~~~~~f~lp~~~~~~~p~~f~~i~~n~~~~~~~~~~~~~~~~~C~C~~~-~~-~~~~C~--------~~C~---- 85 (368)
.|+...|.+++++-+. ...|+.|+||.++++..............+|+|... |. ..+.|. ..|.
T Consensus 16 Dis~G~E~~pi~~~n~--~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~~C~~~~C~C~~~~~~y~~~~~l~~~~ 93 (290)
T 3bo5_A 16 DVACGQENLPVGAWPP--GAAPAPFQYTPDHVVGPGADIDPTQITFPGCICVKTPCLPGTCSCLRHGENYDDNSCLRDIG 93 (290)
T ss_dssp CTTTTCSSSCCEEEST--TCCCCCCEECSSCEECTTCSSCTTSCCCCCCCCCSSCCCTTTCGGGTTSCSBCTTSCBCC--
T ss_pred hhhCCCCCCceeeECC--CCCCCCcEEeeceecCCCCcCCcccccCCCCCCCCCCcCCCCCcchhhcCccCccccccccc
Confidence 4566667666665333 567899999999987543211122223468999863 32 122231 1122
Q ss_pred ----ccceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhh
Q 017646 86 ----CGMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMK 161 (368)
Q Consensus 86 ----c~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~ 161 (368)
++..++||++.|.|+..|+||++|++...+|+|++|+.+||||||+++|++|+||+||+||||+.+++++|...+.
T Consensus 94 ~~~~~~~~~~EC~~~C~C~~~C~Nr~~q~g~~~~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gevi~~~e~~~R~~~~~ 173 (290)
T 3bo5_A 94 SGGKYAEPVFECNVLCRCSDHCRNRVVQKGLQFHFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEVLGFSEVQRRIHLQT 173 (290)
T ss_dssp ---CCCCCEECCCTTCCSCTTCTTCCGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEECCEEEECHHHHHHHHTTCC
T ss_pred cccccCCceEeCCCCCCCCCCCCCeEcccCCcccEEEEEcCCCcceEeECCccCCCCEEEEEeeEEeCHHHHHHHHHhhc
Confidence 2346899999999999999999999999999999999999999999999999999999999999999988865432
Q ss_pred hcCCcceeEeeecc--------cccccccccCCccccccCCCCCCcceeEEEECC-eEEEEEEEccCCCCCCeEEEecCC
Q 017646 162 HLGETNFYLCEINR--------DMVIDATYKGNKSRYINHSCCPNTEMQKWIIDG-ETRIGIFATRDIKKGENLTYDYQF 232 (368)
Q Consensus 162 ~~~~~~~y~~~~~~--------~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~g-~~ri~i~A~RdI~~GEELT~dY~~ 232 (368)
. ....|+|.+.. .++|||+.+||++|||||||+||+.++.|.+++ .++++|||+|||++||||||||+.
T Consensus 174 ~--~~~~Y~~~l~~~~~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~ 251 (290)
T 3bo5_A 174 K--SDSNYIIAIREHVYNGQVMETFVDPTYIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSG 251 (290)
T ss_dssp S--SCCCCCEEEEECC-----EEEEEEEEEEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTS
T ss_pred c--cCCcceeeecccccCCccceeEEeeeecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCC
Confidence 2 23346666542 368999999999999999999999998888776 589999999999999999999998
Q ss_pred CCCC--------------CCceeecCCCCCccccCCC
Q 017646 233 VQFG--------------ADQDCHCGAAGCRRKLGAK 255 (368)
Q Consensus 233 ~~~~--------------~~~~C~Cgs~~Crg~l~~~ 255 (368)
.+|. ..+.|+||+++|||+|+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~C~CGs~~CrG~l~~~ 288 (290)
T 3bo5_A 252 RYLNLTVSASKERLDHGKLRKPCYCGAKSCTAFLPFD 288 (290)
T ss_dssp CTTCCSSSEEEEEEECSSCCCBCCCCCTTCCSBCCCE
T ss_pred ccccccccccccccccCCCCccccCCCcCCCccCCCC
Confidence 7763 2479999999999999864
No 6
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-48 Score=375.73 Aligned_cols=240 Identities=29% Similarity=0.473 Sum_probs=186.3
Q ss_pred chhhHHHHHHHHHHhhC-CCeEEeCCCCCCCCC-CCCcEEccceeeccccccccCCCCCccccccCCCCCCCCCCCCCCc
Q 017646 9 DNSRIGHAFNKLLKQIG-NPVEFELPDWFIKPK-AIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPGSSGVCDRDCHC 86 (368)
Q Consensus 9 ~~~~~~~~~~~l~~~~~-~~~~f~lp~~~~~~~-p~~f~~i~~n~~~~~~~~~~~~~~~~~C~C~~~~~~~~~C~~~C~c 86 (368)
.|....+.|+..++... +..++.+.+.++... |+.|+||+++++.... .. ......+|+|.. |.....|...|..
T Consensus 22 ~q~~~~~~w~~~~~~~~~~~~~i~~~N~vd~~~~P~~f~yi~~~~~~~~~-~~-~~~~~~gC~C~~-C~~~~cc~~~~~~ 98 (300)
T 2r3a_A 22 KQRIALQRWQDELNRRKNHKGMIFVENTVDLEGPPSDFYYINEYKPAPGI-SL-VNEATFGCSCTD-CFFQKCCPAEAGV 98 (300)
T ss_dssp HHHHHHHHHHHHHHHHCCSSSCEEEECSSSCCCCCSSCEECSSCEECTTC-CC-C---CCCCCCSS-TTTSSCHHHHTTS
T ss_pred hhHHHHHHHHHHhcccccCCCCeEEEeCcCCccCCCCEEECcccccCCCC-cc-CCCCCCCcCCcC-CCCCCcchhhccC
Confidence 45556677888887763 345667767776554 5589999999885432 21 124567899985 4332222111111
Q ss_pred --------------cceeeeCCCCCCCCCCCCCccCccCCcccEEEEEec-CCCcEEEecccCCCCcEEEEEcceeechh
Q 017646 87 --------------GMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTE-KCGAGIVADEDIKRGEFVIEYVGEVIDDQ 151 (368)
Q Consensus 87 --------------~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~v~~s~-~kG~GlfA~~~I~~G~~I~ey~Gevi~~~ 151 (368)
..+++||++.|.|+..|+||++|++...+++|+++. .+||||||+++|++|+||+||+|||++.+
T Consensus 99 ~~~Y~~~g~l~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi~~~ 178 (300)
T 2r3a_A 99 LLAYNKNQQIKIPPGTPIYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVITSE 178 (300)
T ss_dssp CCSBCTTSCBCSCTTCCEECCCTTSSCCTTCTTCSGGGCCCSCEEEEECSSSCCEEEEESSCBCTTCEEEEECCEEEEHH
T ss_pred ccccccCCcEeccCCCcEEeCCCCCCCCCcCCCccccccccccEEEEEeCCCceEEEEeCccccCCCEeEEEeeEEecHH
Confidence 135899999999999999999999999999999985 79999999999999999999999999999
Q ss_pred hHHHHHHHhhhcCCcceeEeeec---ccccccccccCCccccccCCCCCCcceeEEEEC----CeEEEEEEEccCCCCCC
Q 017646 152 TCEERLWKMKHLGETNFYLCEIN---RDMVIDATYKGNKSRYINHSCCPNTEMQKWIID----GETRIGIFATRDIKKGE 224 (368)
Q Consensus 152 e~~~r~~~~~~~~~~~~y~~~~~---~~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~----g~~ri~i~A~RdI~~GE 224 (368)
++++|...+...+ ..|+|.++ ..++|||+.+||++|||||||+||+.+..|.++ +.++++|||+|||++||
T Consensus 179 ea~~R~~~y~~~~--~~Y~f~l~~~~~~~~IDa~~~GN~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GE 256 (300)
T 2r3a_A 179 EAERRGQFYDNKG--ITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGE 256 (300)
T ss_dssp HHHHHHHTCCHHH--HHTEEECCSSCSSEEEECSSEECGGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTC
T ss_pred HHHHHHHHhhhcc--ccEEEEeecCCceEEEecccccChHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCC
Confidence 9988865443322 34677665 568999999999999999999999999888765 35799999999999999
Q ss_pred eEEEecCCCCCC---------------CCceeecCCCCCccccC
Q 017646 225 NLTYDYQFVQFG---------------ADQDCHCGAAGCRRKLG 253 (368)
Q Consensus 225 ELT~dY~~~~~~---------------~~~~C~Cgs~~Crg~l~ 253 (368)
||||||++.... ..+.|+||+++|||+|.
T Consensus 257 ELt~dY~~~~~~~~~~~~~d~~~~~~~~~~~C~CGs~~Crg~ln 300 (300)
T 2r3a_A 257 ELTFDYQMKGSGDISSDSIDHSPAKKRVRTVCKCGAVTCRGYLN 300 (300)
T ss_dssp EEEECGGGSSCC--------------CCCCBCCCCCTTCCSBCC
T ss_pred EEEEECCCCccccccccccccccccccCCCEeeCCCccccccCc
Confidence 999999977432 14799999999999973
No 7
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=100.00 E-value=9.9e-49 Score=378.38 Aligned_cols=227 Identities=26% Similarity=0.465 Sum_probs=162.7
Q ss_pred CCeEEeCCCCCCC-CCCCCcEEccceeeccccccccCCCCCccccccC--CCCC-CCCCCCC------------------
Q 017646 26 NPVEFELPDWFIK-PKAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTA--SPGS-SGVCDRD------------------ 83 (368)
Q Consensus 26 ~~~~f~lp~~~~~-~~p~~f~~i~~n~~~~~~~~~~~~~~~~~C~C~~--~~~~-~~~C~~~------------------ 83 (368)
|.+++.+-+.++. ..|+.|+||.++++... +.........+|+|.. +|.. .+.|...
T Consensus 8 e~~pi~~~N~vd~~~~P~~F~Yi~~~~~~~~-~~~~~~~~~~gC~C~~~~~C~~~~C~C~~~~~~~~~~~~~~~~~~~~~ 86 (302)
T 1ml9_A 8 AQLPISIVNREDDAFLNPNFRFIDHSIIGKN-VPVADQSFRVGCSCASDEECMYSTCQCLDEMAPDSDEEADPYTRKKRF 86 (302)
T ss_dssp -CCCEEEECSSSSCCCCTTCEECSSCEECTT-CCCCCGGGCCCCCCSSTTGGGSTTSGGGTTSCCC-----------CCS
T ss_pred CCCCEEEEeCCCCCCCCCCCEEeeeeecCCC-ccccCcccCCCccCcCCCCcCCCCCcChhhcccccccccccccccccc
Confidence 5556666566654 46889999999998654 2222233457899987 3431 2333110
Q ss_pred ----------CC------ccceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEEEEccee
Q 017646 84 ----------CH------CGMLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEV 147 (368)
Q Consensus 84 ----------C~------c~~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gev 147 (368)
++ .+..++||++.|.|+..|+||++|++...+++|++|+.+||||||+++|++|+||+||+|||
T Consensus 87 ~y~~~g~~~g~l~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gev 166 (302)
T 1ml9_A 87 AYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVERGRTVPLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEI 166 (302)
T ss_dssp SBBCSSTTBTSBCHHHHHHCCCEECCCTTCSSCTTCTTCHHHHCCCSCEEEEECSSSCEEEECSSCBCTTCEEEECCCEE
T ss_pred ccccCCcccceeehhcccCCCCeEecCCCCCCCCCCCCcccccCCccceEEEEcCCCceEEEECCeeCCCCEEEEEeeEE
Confidence 11 12357999999999999999999999999999999999999999999999999999999999
Q ss_pred echhhHHHHHHHhhhcCCcceeEeeecc--------------cccccccccCCccccccCCCCCCcceeEEEEC----Ce
Q 017646 148 IDDQTCEERLWKMKHLGETNFYLCEINR--------------DMVIDATYKGNKSRYINHSCCPNTEMQKWIID----GE 209 (368)
Q Consensus 148 i~~~e~~~r~~~~~~~~~~~~y~~~~~~--------------~~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~----g~ 209 (368)
|+.+++++|...+......+.|+|.++. .++|||+.+||+||||||||+||+.+..+..+ +.
T Consensus 167 i~~~e~~~R~~~~~~~~~~~~Y~f~l~~~~~~~~~d~~~~~~~~~IDa~~~GN~arfiNHSC~PN~~~~~~~~~~~~~~~ 246 (302)
T 1ml9_A 167 ITSEEADRRRAESTIARRKDVYLFALDKFSDPDSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHI 246 (302)
T ss_dssp ECHHHHHHHHHHSCGGGCHHHHEEECCSSCCSSSSCHHHHSCCCEEECSSEECGGGGCEECSSCSEEEEEEESSGGGGGG
T ss_pred eCHHHHHHHHHHHhhhcCCceEEEEeccccCcccccccccCCcEEEeCcccCCHHHhcccCCCCCeeEEEEEeccCCCCc
Confidence 9999999887665433445668888763 68999999999999999999999988655433 23
Q ss_pred EEEEEEEccCCCCCCeEEEecCCCCCCC------------CceeecCCCCCccccC
Q 017646 210 TRIGIFATRDIKKGENLTYDYQFVQFGA------------DQDCHCGAAGCRRKLG 253 (368)
Q Consensus 210 ~ri~i~A~RdI~~GEELT~dY~~~~~~~------------~~~C~Cgs~~Crg~l~ 253 (368)
++++|||+|||++||||||||++.+|.. .+.|+||+++|||+|.
T Consensus 247 ~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CGs~~Crg~l~ 302 (302)
T 1ml9_A 247 HDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCGTAKCRGYLW 302 (302)
T ss_dssp CEEEEEESSCBCTTCEEEECTTC---------------------------------
T ss_pred eEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCCCCcCccccC
Confidence 7999999999999999999999877642 3699999999999973
No 8
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=100.00 E-value=4.6e-49 Score=377.81 Aligned_cols=219 Identities=30% Similarity=0.537 Sum_probs=175.8
Q ss_pred HHHhhCCCeEEeCCCCCCCC-CCCCcEEccceeeccccccccCCCCCccccccCCCCCCCCCCCCCCcc-----------
Q 017646 20 LLKQIGNPVEFELPDWFIKP-KAIPYVFIKRNIYLTKRIKRRLEDDGIFCSCTASPGSSGVCDRDCHCG----------- 87 (368)
Q Consensus 20 l~~~~~~~~~f~lp~~~~~~-~p~~f~~i~~n~~~~~~~~~~~~~~~~~C~C~~~~~~~~~C~~~C~c~----------- 87 (368)
.|+...|.+++++-+.++.. .|+.|+||+++++..............+|+|..+|.+ ..|.|.
T Consensus 34 Dis~G~E~~pi~~~N~vD~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~~C~~-----~~C~C~~~~~~~~y~~~ 108 (287)
T 3hna_A 34 DIARGYERIPIPCVNAVDSEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCIDDCSS-----SNCMCGQLSMRCWYDKD 108 (287)
T ss_dssp CTTTTCSSSCCCEEESSSSCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSSSSCS-----TTCHHHHHTSSCCBCTT
T ss_pred hhCCCCCCCCEEEEeCCCCCCCCCCcEEccccccCCCccccccCCCCCCCcCcCCCCC-----CCCcCcccCcccccCCC
Confidence 34555566666665555544 5789999999987543211112223468999976543 234442
Q ss_pred ------------ceeeeCCCCCCCCCCCCCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHH
Q 017646 88 ------------MLLSSCSSGCKCGNSCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEE 155 (368)
Q Consensus 88 ------------~~~~eC~~~C~C~~~C~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~ 155 (368)
.+++||++.|.|+..|+||++|++...+++|++++++||||||+++|++|+||+||+|+|++.++++.
T Consensus 109 g~l~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~~~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi~~~e~~~ 188 (287)
T 3hna_A 109 GRLLPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLRARLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELISDSEADV 188 (287)
T ss_dssp SCBCTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCCSCEEEEECSSSSEEEEESSCBCTTCEEEEECEEEEEHHHHHT
T ss_pred CcccccccccCCceEEecCCCCCCCCCCCCcccCcCCcccEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEccHHHHhh
Confidence 35899999999999999999999999999999999999999999999999999999999999887665
Q ss_pred HHHHhhhcCCcceeEeeeccc----ccccccccCCccccccCCCCCCcceeEEEECC----eEEEEEEEccCCCCCCeEE
Q 017646 156 RLWKMKHLGETNFYLCEINRD----MVIDATYKGNKSRYINHSCCPNTEMQKWIIDG----ETRIGIFATRDIKKGENLT 227 (368)
Q Consensus 156 r~~~~~~~~~~~~y~~~~~~~----~~IDa~~~Gn~aRfINHSC~PN~~~~~~~~~g----~~ri~i~A~RdI~~GEELT 227 (368)
| ..+.|+|.++.. ++|||+.+||++|||||||+||+.++.+++.+ .++|+|||+|||++|||||
T Consensus 189 r--------~~~~Y~f~l~~~~~~~~~IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT 260 (287)
T 3hna_A 189 R--------EEDSYLFDLDNKDGEVYCIDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLG 260 (287)
T ss_dssp C--------SCCTTEEESCCSSSSCEEEEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCE
T ss_pred h--------cccceEEEeccCCCceEEEeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEE
Confidence 4 234577777643 69999999999999999999999988776543 4699999999999999999
Q ss_pred EecCCCCCC---CCceeecCCCCCccc
Q 017646 228 YDYQFVQFG---ADQDCHCGAAGCRRK 251 (368)
Q Consensus 228 ~dY~~~~~~---~~~~C~Cgs~~Crg~ 251 (368)
|||+..+|. ..+.|+||+++|||.
T Consensus 261 ~dYg~~~~~~~~~~~~C~CGs~~CRgs 287 (287)
T 3hna_A 261 FDYGERFWDIKGKLFSCRCGSPKCRHS 287 (287)
T ss_dssp ECCCHHHHHHHTTTCCCCCCCTTCSCC
T ss_pred EeCCCcccccCCCcCEeeCCCCCCCCC
Confidence 999977653 468999999999984
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=100.00 E-value=1.1e-39 Score=295.57 Aligned_cols=150 Identities=37% Similarity=0.623 Sum_probs=132.4
Q ss_pred CCCCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccc
Q 017646 102 SCLNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDA 181 (368)
Q Consensus 102 ~C~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa 181 (368)
.|+++.+|++...+|+|++++.+||||||+++|++|++|+||+|+|++..++++|...+...+ ...|+|.++...+|||
T Consensus 40 ~~~~~~l~~~~~~~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi~~~e~~~R~~~y~~~~-~~~Y~f~l~~~~~IDa 118 (192)
T 2w5y_A 40 PMRFRHLKKTSKEAVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKG-IGCYMFRIDDSEVVDA 118 (192)
T ss_dssp HHHHTTHHHHHHHHEEEEECSSSSEEEEESSCBCTTCEEEECCSEEEEGGGHHHHHHHHHHHT-CCCCEEECSSSEEEEC
T ss_pred chhHHHHhccCCCcEEEEEcCCceeEEEECcccCCCCEEEEeeeeEechHHHHHHHHHHhhcC-CceeeeeecCceEEEC
Confidence 567788888888899999999999999999999999999999999999998887765554433 3468899999999999
Q ss_pred cccCCccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC--CceeecCCCCCcccc
Q 017646 182 TYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA--DQDCHCGAAGCRRKL 252 (368)
Q Consensus 182 ~~~Gn~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~--~~~C~Cgs~~Crg~l 252 (368)
+..||++|||||||+|||.++.|.++|..+++|+|+|||++|||||+||++..+.. .+.|.||+++|||+|
T Consensus 119 ~~~Gn~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~~~~~~C~Cgs~~Crg~l 191 (192)
T 2w5y_A 119 TMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKCRKFL 191 (192)
T ss_dssp TTTCCGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC-------CCBCCCCCTTCCSBC
T ss_pred ccccChhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcCCCCceeECCCCCCcCcC
Confidence 99999999999999999999988899999999999999999999999999988763 689999999999997
No 10
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=100.00 E-value=1.5e-34 Score=255.65 Aligned_cols=132 Identities=29% Similarity=0.470 Sum_probs=117.0
Q ss_pred CCccCccCCcccEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCc---ceeEeeeccccccc
Q 017646 104 LNKPFQNRPVKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGET---NFYLCEINRDMVID 180 (368)
Q Consensus 104 ~Nr~~q~~~~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~---~~y~~~~~~~~~ID 180 (368)
.++.+|++...+++|+.++++||||||+++|++|++|+||.|++++..++..|...+...... .+++..++..++||
T Consensus 20 ~~~~~q~g~~~~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi~~~~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~iD 99 (166)
T 3f9x_A 20 IDELIESGKEEGMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLIEITDAKKREALYAQDPSTGCYMYYFQYLSKTYCVD 99 (166)
T ss_dssp HHHHHHHTCCTTEEEEEETTTEEEEEESSCBCTTCEEEECCSEEEEHHHHHHHHHHHTTCTTSCCCEEEEEETTEEEEEE
T ss_pred HHHHHHcCCccCeEEEECCCceeEEEECCCcCCCCEEEEeeceEcCHHHHHHHHHHHhhccCCCceEEEEecCCCCeEEe
Confidence 356788899999999999999999999999999999999999999999999887666543333 23344477889999
Q ss_pred cccc-CCccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCC
Q 017646 181 ATYK-GNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 181 a~~~-Gn~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
|+.. ||++|||||||+|||.+..+.+++.++++|||+|||++||||||||++.+.
T Consensus 100 a~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 155 (166)
T 3f9x_A 100 ATRETNRLGRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSK 155 (166)
T ss_dssp CCSCCSCSGGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCH
T ss_pred chhcCCChhheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChh
Confidence 9996 999999999999999999999999999999999999999999999998765
No 11
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=99.96 E-value=5.7e-29 Score=235.28 Aligned_cols=141 Identities=18% Similarity=0.235 Sum_probs=112.7
Q ss_pred ceeeeCCCCCCCCCCCCCccCccC-CcccEEEEEecC--CCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcC
Q 017646 88 MLLSSCSSGCKCGNSCLNKPFQNR-PVKKMKLVQTEK--CGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLG 164 (368)
Q Consensus 88 ~~~~eC~~~C~C~~~C~Nr~~q~~-~~~~l~v~~s~~--kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~ 164 (368)
..+++|+..|.. ..|.|..+... ....++|.+|+. +||||||+++|++|++|+||.|++|+..++++|...+
T Consensus 83 ~~~~~~d~~~~~-~i~~~~~~~~~~~~~~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi~~~e~~~R~~~~---- 157 (261)
T 2f69_A 83 NSVYHFDKSTSS-CISTNALLPDPYESERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWAL---- 157 (261)
T ss_dssp CCEECCCCCCSS-CSCSCTTSCCHHHHTTEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEECHHHHHTSCGGG----
T ss_pred CceEecCcccCc-ceeCccccCCcccCceEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEeCHHHHHHHhhhh----
Confidence 357788776432 34666665543 235789999875 4999999999999999999999999999888765443
Q ss_pred CcceeEeeeccccccccc--------ccCCccccccCCCCCCcceeEEEECCe-EEEEEEEccCCCCCCeEEEecCCCCC
Q 017646 165 ETNFYLCEINRDMVIDAT--------YKGNKSRYINHSCCPNTEMQKWIIDGE-TRIGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 165 ~~~~y~~~~~~~~~IDa~--------~~Gn~aRfINHSC~PN~~~~~~~~~g~-~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
..|.|.++...+|||+ ..||++|||||||+|||.+..|...+. ..++|||+|||++||||||||++...
T Consensus 158 --~~~~f~l~~~~~IDa~~~~~~~~~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~ 235 (261)
T 2f69_A 158 --NGNTLSLDEETVIDVPEPYNHVSKYCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 235 (261)
T ss_dssp --CSSCEECSSSCEEECCTTTTSTTTCCSCCGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSC
T ss_pred --ccceeeecCCeEEEccccccccccccccceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccc
Confidence 1356788999999995 489999999999999999988744332 34599999999999999999998653
No 12
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.95 E-value=4.6e-29 Score=209.17 Aligned_cols=110 Identities=22% Similarity=0.269 Sum_probs=96.7
Q ss_pred cccEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccccccCCcccccc
Q 017646 113 VKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKSRYIN 192 (368)
Q Consensus 113 ~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa~~~Gn~aRfIN 192 (368)
.++++|++++.+||||||+++|++|++|+||.|++++.+++.. ....|+|.++. |++..+|.+||||
T Consensus 3 ~~~~~v~~s~~~G~GvfA~~~I~~G~~I~ey~g~vi~~~e~~~---------~~~~y~f~~~~----d~~~~~~~~~~~N 69 (119)
T 1n3j_A 3 NDRVIVKKSPLGGYGVFARKSFEKGELVEECLCIVRHNDDWGT---------ALEDYLFSRKN----MSAMALGFGAIFN 69 (119)
T ss_dssp CSSEEEECSCSSCCEEEECCCBCSCEEECCCCCEEECSHHHHH---------HSCSEEEEETT----EEEEESSSHHHHH
T ss_pred CCCEEEEECCCceeEEEECCcCCCCCEEEEeeEEEECHHHHhh---------ccCCeEEEeCC----ccccccCceeeec
Confidence 4689999999999999999999999999999999999877654 12347777766 8999999999999
Q ss_pred CCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC
Q 017646 193 HSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA 237 (368)
Q Consensus 193 HSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~ 237 (368)
|||+|||.+.. ..+..++.++|+|||++|||||+||+..+|+.
T Consensus 70 Hsc~pN~~~~~--~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 70 HSKDPNARHEL--TAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp SCSSCCCEEEE--CSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred cCCCCCeeEEE--ECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 99999998754 45667899999999999999999999998865
No 13
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.94 E-value=1.5e-28 Score=232.44 Aligned_cols=135 Identities=27% Similarity=0.368 Sum_probs=104.5
Q ss_pred ccEEEEEe-----cCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccccccCCcc
Q 017646 114 KKMKLVQT-----EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKS 188 (368)
Q Consensus 114 ~~l~v~~s-----~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa~~~Gn~a 188 (368)
.+++|..+ +++||||||+++|++|++|+||+|+++...+.+++. +.......++++.. ....+++.+||.|
T Consensus 131 ~gfeV~~~~ry~~e~~G~GlfA~~~I~kGe~I~EY~Geii~~~e~ee~~--~~~~~~~dF~i~~s--~~~~~a~~~g~~a 206 (273)
T 3s8p_A 131 SGFEILPCNRYSSEQNGAKIVATKEWKRNDKIELLVGCIAELSEIEENM--LLRHGENDFSVMYS--TRKNCAQLWLGPA 206 (273)
T ss_dssp GCEEEEEECCCTTCSSEEEEEESSCBCTTCEEEEEEEEEEEECHHHHHH--HCCTTTSCTTEEEE--TTTTEEEEEESGG
T ss_pred CCceEEeccceeecCCCceEEECCccCCCCEEEEEEEEEccccHHHHHH--Hhhhcccccceecc--ccccccceecchH
Confidence 35677665 569999999999999999999999998766655432 11222222222221 2235688899999
Q ss_pred ccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC-CceeecCCCCCccccCCC
Q 017646 189 RYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRKLGAK 255 (368)
Q Consensus 189 RfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~l~~~ 255 (368)
|||||||+|||.+. ..+..++.|+|+|||++|||||+||+...|+. .+.|.||+++|||..+.+
T Consensus 207 rfiNHSC~PN~~~~---~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~~~f~C~C~~c~crG~g~f~ 271 (273)
T 3s8p_A 207 AFINHDCRPNCKFV---STGRDTACVKALRDIEPGEEISCYYGDGFFGENNEFCECYTCERRGTGAFK 271 (273)
T ss_dssp GGCEECSSCSEEEE---EEETTEEEEEESSCBCTTCBCEECCCTTTTSGGGTTCCCHHHHHHTCGGGC
T ss_pred HhhCCCCCCCeEEE---EcCCCEEEEEECceeCCCCEEEEecCchhcCCCCeEEECCCCcCCCCCCCc
Confidence 99999999999763 33446899999999999999999999998875 489999999999997654
No 14
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=99.94 E-value=6.5e-27 Score=224.64 Aligned_cols=117 Identities=21% Similarity=0.300 Sum_probs=99.7
Q ss_pred cccEEEEEecC--CCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccc--------c
Q 017646 113 VKKMKLVQTEK--CGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDA--------T 182 (368)
Q Consensus 113 ~~~l~v~~s~~--kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa--------~ 182 (368)
...++|.+|+. +||||||+++|++|++|+||+|++|+..++.+|...+ ..+.|.++...+||| +
T Consensus 162 ~~~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i~~~~~~~r~~~~------~~~~~~l~~~~~iDa~~~~~~~~~ 235 (293)
T 1h3i_A 162 SERVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRITHQEVDSRDWAL------NGNTLSLDEETVIDVPEPYNHVSK 235 (293)
T ss_dssp HTTEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEECHHHHHHSCGGG------CTTEEECSSSCEEECCTTTTSTTT
T ss_pred ceeEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEcCHHHHhHHhhhc------ccCEEecCCCEEEeCcccccccce
Confidence 35789999855 5599999999999999999999999999988774433 235688999999999 7
Q ss_pred ccCCccccccCCCCCCcceeEEEECCeEE-EEEEEccCCCCCCeEEEecCCCCC
Q 017646 183 YKGNKSRYINHSCCPNTEMQKWIIDGETR-IGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 183 ~~Gn~aRfINHSC~PN~~~~~~~~~g~~r-i~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
..||+||||||||+|||.++.+...+..+ ++|||+|||++||||||||+++..
T Consensus 236 ~~gn~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 236 YCASLGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp CCSCCGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred eeccceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 79999999999999999998875544345 489999999999999999998764
No 15
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=99.93 E-value=7.1e-27 Score=203.40 Aligned_cols=111 Identities=28% Similarity=0.325 Sum_probs=92.8
Q ss_pred CCcccEEEEEe--cCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeec---c-cccccccc-
Q 017646 111 RPVKKMKLVQT--EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEIN---R-DMVIDATY- 183 (368)
Q Consensus 111 ~~~~~l~v~~s--~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~---~-~~~IDa~~- 183 (368)
.....++|.+| +++||||||+++|++|++|++|.|++++.+++. ...|+|.+. . .++|||+.
T Consensus 26 ~lp~~l~l~~S~i~~~G~GVfA~~~I~kG~~~gey~Ge~i~~~e~~-----------~~~Y~f~i~~~~~~~~~IDa~~~ 94 (149)
T 2qpw_A 26 GLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVGDKKKRSQVK-----------NNVYMWEVYYPNLGWMCIDATDP 94 (149)
T ss_dssp TCCTTEEEEECSSCTTSEEEEESSCBCTTCEECCCCCEEECGGGCC-----------CSSSEEEEEETTTEEEEEECSSG
T ss_pred CCCCCeEEEEcCCCCCceEEEECCccCCCCEEEEEeCEEcCHHHhc-----------cCceEEEEecCCCeeEEEeCCCC
Confidence 45678999998 467999999999999999999999999876531 245777763 2 36799997
Q ss_pred -cCCccccccCCCCC---CcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCC
Q 017646 184 -KGNKSRYINHSCCP---NTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFG 236 (368)
Q Consensus 184 -~Gn~aRfINHSC~P---N~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~ 236 (368)
.||++|||||||+| ||... ..+ .++.++|+|||++||||||||+..++.
T Consensus 95 ~~gn~~RfINhSc~p~eqNl~~~--~~~--~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 95 EKGNWLRYVNWACSGEEQNLFPL--EIN--RAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGSCGGGGCEECBTTBTCCEEEE--EET--TEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred CCCcceeeeeccCChhhcCEEEE--EEC--CEEEEEEccCCCCCCEEEEccCCccCC
Confidence 99999999999999 88763 233 589999999999999999999988764
No 16
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.91 E-value=4.2e-25 Score=206.66 Aligned_cols=130 Identities=23% Similarity=0.353 Sum_probs=96.1
Q ss_pred ccEEEEEe-----cCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecccccccccccCCcc
Q 017646 114 KKMKLVQT-----EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINRDMVIDATYKGNKS 188 (368)
Q Consensus 114 ~~l~v~~s-----~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~~~~IDa~~~Gn~a 188 (368)
..++|..+ .++||||||+++|++|++|.+|.|+++...+.+++.. ...... |.+... ...+++..+||++
T Consensus 103 ~g~eV~~~~Ry~~~~~G~Gv~A~~~I~kGE~I~ey~Geli~~t~~e~~~~---~~~~n~-f~i~~~-~~~~~~~l~~~~a 177 (247)
T 3rq4_A 103 SGFTILPCTRYSMETNGAKIVSTRAWKKNEKLELLVGCIAELREADEGLL---RAGEND-FSIMYS-TRKRSAQLWLGPA 177 (247)
T ss_dssp GCEEEEECCCCTTCSSCEEEEESSCBCTTCEEEEEEEEEEECCGGGGGGC---CTTTSC-TTEEEE-TTTTEEEEEESGG
T ss_pred CCcEEEeeeeeeecCCcceEEeCCccCCCCEEEEEEeEEEeCcHHHHHhh---hccCCc-EEEEec-CCcccceeecchh
Confidence 34566553 5789999999999999999999999986544443211 111222 222222 3346888899999
Q ss_pred ccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC-CceeecCCCCCccc
Q 017646 189 RYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA-DQDCHCGAAGCRRK 251 (368)
Q Consensus 189 RfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~-~~~C~Cgs~~Crg~ 251 (368)
|||||||+|||.+..+ +..++.|+|+|||++|||||+||+..+|+. .+.|.|++..+.+.
T Consensus 178 r~iNHSC~PN~~~~~~---~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~~~f~C~C~~C~~~~~ 238 (247)
T 3rq4_A 178 AFINHDCKPNCKFVPA---DGNAACVKVLRDIEPGDEVTCFYGEGFFGEKNEHCECHTCERKGE 238 (247)
T ss_dssp GGCEECSSCSEEEEEE---TTTEEEEEESSCBCTTCBCEECCCTTSSSGGGTTCCCHHHHHHTC
T ss_pred hhcCCCCCCCEEEEEe---CCCEEEEEECCcCCCCCEEEEecCchhcCCCCCEEECCCCCCCCC
Confidence 9999999999976443 335899999999999999999999998865 47888886554444
No 17
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=99.80 E-value=9.4e-20 Score=161.50 Aligned_cols=112 Identities=23% Similarity=0.193 Sum_probs=80.8
Q ss_pred CcccEEEEEe--cCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecc-----cccccccc-
Q 017646 112 PVKKMKLVQT--EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINR-----DMVIDATY- 183 (368)
Q Consensus 112 ~~~~l~v~~s--~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~-----~~~IDa~~- 183 (368)
....++|.+| +++|+||||+++|++|+++++|.|++++.+++... ..+.|++.+.. .++||++.
T Consensus 25 LP~~l~l~~S~i~~~G~GVfA~~~IpkGt~fGpY~Ge~i~~~ea~~~--------~~~~y~w~i~~~~G~~~~~IDa~~e 96 (170)
T 3ep0_A 25 LPAEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVIAPEHVDIC--------KNNNLMWEVFNEDGTVRYFIDASQE 96 (170)
T ss_dssp CCTTEEEEECSSSSCSEEEEESSCBCTTCEEEEECCEEECC------------------CEEEEECTTSSEEEEEECC--
T ss_pred CCCCeEEEEcCCCCCceEEEECcccCCCCEEEecCceecCHHHhccc--------cCCceEEEEecCCCcEEEEEECCCC
Confidence 3457899997 56799999999999999999999999998765431 12346666532 26899997
Q ss_pred -cCCccccccCCCC---CCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCC
Q 017646 184 -KGNKSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 184 -~Gn~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
.||++|||||||. +|+... ..+ .+|.++|+|||.+||||+++|+..+.
T Consensus 97 ~~~NWmR~Vn~A~~~~eqNl~a~--q~~--~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 97 DHRSWMTYIKCARNEQEQNLEVV--QIG--TSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp ----GGGGCEECSSTTTCCEEEE--EET--TEEEEEESSCBCTTCBCEEEECC---
T ss_pred CCcceeeeEEecCCcccCCeeeE--EEC--CEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 7999999999996 787553 233 48999999999999999999998775
No 18
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=99.78 E-value=2.4e-19 Score=156.18 Aligned_cols=113 Identities=17% Similarity=0.129 Sum_probs=79.5
Q ss_pred cccEEEEEe-cCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeec--c--cccccccc--cC
Q 017646 113 VKKMKLVQT-EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEIN--R--DMVIDATY--KG 185 (368)
Q Consensus 113 ~~~l~v~~s-~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~--~--~~~IDa~~--~G 185 (368)
...++|..| +++|+||||++.|++|+.+++|.|++++.+++..+. . ....|++.+. . ..+||++. .|
T Consensus 22 P~~l~l~~S~~~~g~GVfa~~~Ip~G~~fGPy~Ge~~~~~e~~~~~----~--~~~~y~w~i~~~~~~~~~iD~~~~~~~ 95 (151)
T 3db5_A 22 PKQLVLRQSIVGAEVGVWTGETIPVRTCFGPLIGQQSHSMEVAEWT----D--KAVNHIWKIYHNGVLEFCIITTDENEC 95 (151)
T ss_dssp CTTEEEEECC---CEEEEESSCBCTTCEECCCCCEEEC-----------------CCSEEEEEETTEEEEEEECCCTTTS
T ss_pred CCCeEEEEccCCCceEEEEecccCCCCEEEEeccEEeCHHHhhccc----c--cCCCceEEEEeCCCEEEEEECcCCCCC
Confidence 356888885 679999999999999999999999999988766542 1 1122444432 1 35899997 59
Q ss_pred CccccccCCCCC---CcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCC
Q 017646 186 NKSRYINHSCCP---NTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 186 n~aRfINHSC~P---N~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
|.+|||||||++ |+.... .+ .++.++|+|||.+||||+++|+..++
T Consensus 96 NWmR~Vn~A~~~~eqNl~a~q--~~--~~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 96 NWMMFVRKARNREEQNLVAYP--HD--GKIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp CGGGGCEECSSTTTCCEEEEE--ET--TEEEEEESSCBCTTCBCEEEECC---
T ss_pred cceeEEEecCCcccCceEEEE--EC--CEEEEEEccccCCCCEEEEecCHHHH
Confidence 999999999965 886632 33 57999999999999999999998775
No 19
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=99.73 E-value=2.5e-18 Score=155.37 Aligned_cols=111 Identities=19% Similarity=0.213 Sum_probs=87.4
Q ss_pred cccEEEEEe--cCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeecc----cccccccc--c
Q 017646 113 VKKMKLVQT--EKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEINR----DMVIDATY--K 184 (368)
Q Consensus 113 ~~~l~v~~s--~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~~----~~~IDa~~--~ 184 (368)
...++|.++ +++|+||||++.|++|+.+++|.|++++.+++.+. ..+.|++.+.. ..+|||+. .
T Consensus 57 P~~L~lr~S~i~~~G~GVfa~~~IpkGt~fGPY~Ge~~~~~e~~~~--------~~~~y~w~i~~~g~~~~~IDas~e~~ 128 (196)
T 3dal_A 57 PRNLLFKYATNSEEVIGVMSKEYIPKGTRFGPLIGEIYTNDTVPKN--------ANRKYFWRIYSRGELHHFIDGFNEEK 128 (196)
T ss_dssp CTTEEEEECTTSCCEEEEEESSCBCTTEEECCCCCEEECTTTCC-----------CCTTEEEEEETTEEEEEEECCCTTS
T ss_pred CCCeEEEECCCCCceeEEEEccccCCCCEEEeccceEcCHHHhhhc--------cCCcceeeeccCCCEEEEEECCCCCC
Confidence 457888887 55999999999999999999999999998764221 12335555532 26899986 8
Q ss_pred CCccccccCCCC---CCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCC
Q 017646 185 GNKSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 185 Gn~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
||.+|||||||. +|+... ..+ .+|.++|+|||.+||||+++|+.+++
T Consensus 129 gNWmRfVn~A~~~~eqNl~a~--q~~--~~I~y~a~RdI~pGeELlvwYg~~Y~ 178 (196)
T 3dal_A 129 SNWMRYVNPAHSPREQNLAAC--QNG--MNIYFYTIKPIPANQELLVWYCRDFA 178 (196)
T ss_dssp SCGGGGCEECSSTTTCCEEEE--EET--TEEEEEESSCBCTTCBCEEEECHHHH
T ss_pred CceEEeEEecCCcccCCcEEE--EEC--CEEEEEECcccCCCCEEEEecCHHHH
Confidence 999999999996 687653 233 58999999999999999999986553
No 20
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=99.63 E-value=1.6e-16 Score=146.75 Aligned_cols=137 Identities=22% Similarity=0.187 Sum_probs=86.1
Q ss_pred ccEEEEEecCCCcEEEec-ccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeeec--c--cccccccc--cCC
Q 017646 114 KKMKLVQTEKCGAGIVAD-EDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEIN--R--DMVIDATY--KGN 186 (368)
Q Consensus 114 ~~l~v~~s~~kG~GlfA~-~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~~--~--~~~IDa~~--~Gn 186 (368)
..++|.++...|.|||+. +.|++|+.+++|.|++++..++. ..|++.+. . ..+||++. .||
T Consensus 72 ~~L~vr~S~i~~~Gv~~~~~~IpkGt~fGPY~Ge~~s~~ea~------------~~y~wei~~~~g~~~~IDgsde~~gN 139 (237)
T 3ray_A 72 QGMEVVKDTSGESDVRCVNEVIPKGHIFGPYEGQISTQDKSA------------GFFSWLIVDKNNRYKSIDGSDETKAN 139 (237)
T ss_dssp TTEEEEECTTSCEEEEECSSCBCTTEEECCCCSEEECC-----------------CCEEEEECTTSCEEEEECCCTTTSC
T ss_pred CCeEEEEcCCCCcceEEEeCcCCCCCEEEecccEEcChHHcc------------ccceEEEEcCCCcEEEEecCCCCCCc
Confidence 468999999999999987 89999999999999999875431 12444442 2 24899997 799
Q ss_pred ccccccCCCC---CCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCCCceeecCCCCCccccCCCCCCCCCCh
Q 017646 187 KSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGADQDCHCGAAGCRRKLGAKPSKPKISS 263 (368)
Q Consensus 187 ~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~~~~C~Cgs~~Crg~l~~~~~~~~~~~ 263 (368)
++|||||+|. +|+... ..+ .+|.++|+|+|.+||||+++|+..++ ....+.|++.-|+....+...-+...+
T Consensus 140 WmRfVn~Ar~~~EqNL~A~--q~~--~~Iyy~a~RdI~pGeELlVwYg~~Y~-~~l~~~~~~~~~~~~~~~~k~~~~~~~ 214 (237)
T 3ray_A 140 WMRYVVISREEREQNLLAF--QHS--ERIYFRACRDIRPGEWLRVWYSEDYM-KRLHSMSQETIHRNLARGEKRLQREKS 214 (237)
T ss_dssp GGGGCEECCCTTTCCEEEE--EET--TEEEEEESSCBCTTCBCEEEECHHHH-HHHCC----------------------
T ss_pred ceeEEEcCCCcccccceeE--EeC--CEEEEEEccccCCCCEEEEeeCHHHH-HHhcccccchhcccccchhhcccccCc
Confidence 9999999997 576553 233 58899999999999999999997764 235678888899888777655444444
Q ss_pred HHHH
Q 017646 264 DAAL 267 (368)
Q Consensus 264 ~~~l 267 (368)
+.++
T Consensus 215 ~~~~ 218 (237)
T 3ray_A 215 EQVL 218 (237)
T ss_dssp ----
T ss_pred cccc
Confidence 4443
No 21
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=99.52 E-value=5.9e-15 Score=128.50 Aligned_cols=102 Identities=8% Similarity=0.089 Sum_probs=76.9
Q ss_pred cEEEEEecCCCcEEEecccCCCCcEEEEEcceeechhhHHHHHHHhhhcCCcceeEeee------------ccccccccc
Q 017646 115 KMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVIDDQTCEERLWKMKHLGETNFYLCEI------------NRDMVIDAT 182 (368)
Q Consensus 115 ~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi~~~e~~~r~~~~~~~~~~~~y~~~~------------~~~~~IDa~ 182 (368)
.++|. ..|+||||++.|++|+.+++|.|++++.++... ..|.+.+ +...+||++
T Consensus 24 ~L~i~---~~g~GVfA~~~IpkGt~fGPy~Ge~~~~~e~~~-----------~~~~~~v~~~d~~~~~~~~~~~~~iD~~ 89 (152)
T 3ihx_A 24 VLYID---RFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKD-----------CYIHLKVSLDKGDRKERDLHEDLWFELS 89 (152)
T ss_dssp TEEEC---TTTCSEEESSCBCSSCEECCCCSCEECSTTCCS-----------SSCCCBC---------------CEECCC
T ss_pred ceEEe---ecCCeEEECceecCCCEEEeeccEEcCHHHhcc-----------CcceEEEEccccccccccCCccEEEEcc
Confidence 45553 358999999999999999999999999865311 1121111 135789998
Q ss_pred c--cCCccccccCCCC---CCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCC
Q 017646 183 Y--KGNKSRYINHSCC---PNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQ 234 (368)
Q Consensus 183 ~--~Gn~aRfINHSC~---PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~ 234 (368)
. .||.+|||||+|. +|+... .. ..++.+.|+|+|.+||||+++|+.++
T Consensus 90 ~~~~~NWmr~vn~a~~~~eqNl~a~--q~--~~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 90 DETLCNWMMFVRPAQNHLEQNLVAY--QY--GHHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp CTTTSCGGGGCCBCCSTTTCCEEEE--EC--SSSEEEEESSCBCTTCBCCEEECHHH
T ss_pred CCCCCcceeeeeccCCccCCCcEEE--Ee--CCeEEEEEeeecCCCCEEEEechHHH
Confidence 6 5999999999998 677552 22 35788999999999999999998654
No 22
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.25 E-value=1.1e-11 Score=126.67 Aligned_cols=62 Identities=27% Similarity=0.461 Sum_probs=44.8
Q ss_pred ccccccCCCCCCcceeEEEECC-----------eEEEEEEEccCCCCCCeEEEecCCCCCCC---------CceeecCCC
Q 017646 187 KSRYINHSCCPNTEMQKWIIDG-----------ETRIGIFATRDIKKGENLTYDYQFVQFGA---------DQDCHCGAA 246 (368)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g-----------~~ri~i~A~RdI~~GEELT~dY~~~~~~~---------~~~C~Cgs~ 246 (368)
.+.||||||.||+.+.. .++ ..++.|+|+|||++|||||++|....+.. .+.+.|.+.
T Consensus 200 ~~s~~NHSC~PN~~~~~--~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~ 277 (490)
T 3n71_A 200 NLGLVNHDCWPNCTVIF--NNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCE 277 (490)
T ss_dssp TGGGCEECSSCSEEEEE--ECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCH
T ss_pred hhhhcccCCCCCeeEEe--cCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCC
Confidence 36689999999997633 222 12899999999999999999998765532 123445555
Q ss_pred CCcc
Q 017646 247 GCRR 250 (368)
Q Consensus 247 ~Crg 250 (368)
.|..
T Consensus 278 ~C~~ 281 (490)
T 3n71_A 278 HCQK 281 (490)
T ss_dssp HHHH
T ss_pred CCCC
Confidence 6754
No 23
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.09 E-value=3.4e-10 Score=113.97 Aligned_cols=45 Identities=29% Similarity=0.555 Sum_probs=37.0
Q ss_pred ccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCC
Q 017646 187 KSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQF 235 (368)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~ 235 (368)
.+.|+||||.||+.+. +. + .++.|+|+|||++|||||++|....+
T Consensus 201 ~~s~~NHsC~PN~~~~--~~-~-~~~~~~a~r~I~~Geel~i~Y~~~~~ 245 (433)
T 3qww_A 201 DVALMNHSCCPNVIVT--YK-G-TLAEVRAVQEIHPGDEVFTSYIDLLY 245 (433)
T ss_dssp TGGGSEECSSCSEEEE--EE-T-TEEEEEESSCBCTTCEEEECCSCTTS
T ss_pred cccccCCCCCCCceEE--Ec-C-CEEEEEeccCcCCCCEEEEeecCCcC
Confidence 4568999999999663 22 3 36889999999999999999987665
No 24
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.81 E-value=9.5e-10 Score=110.44 Aligned_cols=62 Identities=29% Similarity=0.445 Sum_probs=46.9
Q ss_pred CccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCCCCCCC---------CceeecCCCCCccc
Q 017646 186 NKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQFVQFGA---------DQDCHCGAAGCRRK 251 (368)
Q Consensus 186 n~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~~~~~~---------~~~C~Cgs~~Crg~ 251 (368)
..++||||||.||+.+.. . | .++.|+|+|||++|||||++|....+.. .+.+.|.+..|..-
T Consensus 200 ~~~s~~NHsC~PN~~~~~--~-~-~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~ 270 (429)
T 3qwp_A 200 PSISLLNHSCDPNCSIVF--N-G-PHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQ 270 (429)
T ss_dssp TTGGGCEECSSCSEEEEE--E-T-TEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHHT
T ss_pred hhhHhhCcCCCCCeEEEE--e-C-CEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCCC
Confidence 457899999999997642 2 2 4788999999999999999998766542 23456666677653
No 25
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=97.75 E-value=5.8e-05 Score=55.06 Aligned_cols=43 Identities=19% Similarity=0.276 Sum_probs=40.1
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEe
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFID 357 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~ 357 (368)
-||..|..-||.|.-|| +.|.|+|+.+....|.|-||.+|.|-
T Consensus 11 ~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKdgT~e~L~ 54 (66)
T 2l8d_A 11 ADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKDGTELALK 54 (66)
T ss_dssp CSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecCCCEEeec
Confidence 38999999999999999 99999999999999999999988774
No 26
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=97.68 E-value=8.1e-05 Score=54.45 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=40.1
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEe
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFID 357 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~ 357 (368)
-||..|..-||.|.-|| +.|.++|+.+....|.|-||.+|.|-
T Consensus 14 ~vgd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKdgT~e~L~ 57 (68)
T 2dig_A 14 ADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDGTELELK 57 (68)
T ss_dssp CSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEccCCccceEEEEEEeccCCceEEEEecCCCEEEec
Confidence 48999999999999999 99999999999999999999988764
No 27
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=97.67 E-value=9.2e-05 Score=57.40 Aligned_cols=47 Identities=11% Similarity=0.135 Sum_probs=40.9
Q ss_pred CcccccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 311 CPQCCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
...-.||.+|..-| .|..|| |.|.+.+.. ++.+|+|+||.+|.|...
T Consensus 19 ~~~f~vGd~VlArW-~D~~yYPAkI~sV~~~-~~YtV~F~DG~~etvk~~ 66 (85)
T 3qii_A 19 SSEFQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI 66 (85)
T ss_dssp --CCCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETTSCEEEEEGG
T ss_pred CcccccCCEEEEEe-CCCCEeeEEEEEECCC-CeEEEEEeCCCeEEecHH
Confidence 34556999999999 999999 999999998 679999999999998764
No 28
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=97.49 E-value=0.00023 Score=52.86 Aligned_cols=45 Identities=11% Similarity=0.129 Sum_probs=40.2
Q ss_pred cccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEeccc
Q 017646 314 CCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMAK 360 (368)
Q Consensus 314 ~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~~ 360 (368)
--||.++..-| .|.+|| |.|.+.+.. +..+|.|+||.+|.|.+..
T Consensus 7 ~~vGd~vmArW-~D~~yYpA~I~si~~~-~~Y~V~F~dG~~etvk~~~ 52 (67)
T 3p8d_A 7 FQINEQVLACW-SDCRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHIH 52 (67)
T ss_dssp CCTTCEEEEEC-TTSCEEEEEEEEECTT-SEEEEEETTSCEEEEEGGG
T ss_pred cccCCEEEEEc-CCCCEeeEEEEEECCC-CeEEEEEeCCceEEEeHHH
Confidence 34899999999 999999 999999998 6799999999999987653
No 29
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=97.28 E-value=0.00063 Score=49.10 Aligned_cols=45 Identities=13% Similarity=0.246 Sum_probs=41.5
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeec-CceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFED-GESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~d-g~~e~~~l~~ 360 (368)
+|..+-.-|..|..|| ++|.+.++..++..|.|.| |.+|.+.++.
T Consensus 6 ~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn~e~v~~~~ 52 (59)
T 1mhn_A 6 VGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSD 52 (59)
T ss_dssp TTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGG
T ss_pred cCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEcCCCEEEEcHHH
Confidence 7889999999999999 9999999988999999988 9999998864
No 30
>2g3r_A Tumor suppressor P53-binding protein 1; tandem tudor domains, cell cycle-transcription complex; 1.25A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2ig0_A* 3lgf_A* 3lgl_A* 3lh0_A* 1xni_A
Probab=97.20 E-value=0.00045 Score=56.61 Aligned_cols=44 Identities=25% Similarity=0.289 Sum_probs=38.7
Q ss_pred ccccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEe
Q 017646 313 QCCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFID 357 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~ 357 (368)
.++||.||-.-|+.|.-|| |.|.+ |....+.+|+||||++-.+.
T Consensus 4 ~~~~G~rV~AkWsdn~~yYpG~V~~-~~~~~ky~V~FdDg~~~~v~ 48 (123)
T 2g3r_A 4 NSFVGLRVVAKWSSNGYFYSGKITR-DVGAGKYKLLFDDGYECDVL 48 (123)
T ss_dssp -CCTTCEEEEECTTTCCEEEEEEEE-EEETTEEEEEETTSCEEEEE
T ss_pred ccccceEEEEEeccCCcCcccEEEE-eccCCeEEEEEcCCCeeEee
Confidence 4679999999999888999 99988 58899999999999988663
No 31
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=97.13 E-value=0.001 Score=48.84 Aligned_cols=45 Identities=16% Similarity=0.322 Sum_probs=41.5
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeec-CceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFED-GESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~d-g~~e~~~l~~ 360 (368)
+|..+.+-|..|..|| ++|.+.++.++...|.|.| |.+|.+.+++
T Consensus 11 vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvdYGn~e~V~~~~ 57 (64)
T 4a4f_A 11 VGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLLN 57 (64)
T ss_dssp TTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETTTTEEEEEEGGG
T ss_pred CCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEecCCEEEEeHHH
Confidence 8999999999999999 9999999988999999966 9999998764
No 32
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=97.11 E-value=0.0012 Score=46.60 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=39.0
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeec-CceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFED-GESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~d-g~~e~~~l~~ 360 (368)
+|..+-.-|..|..|| ++|.+.++..++..|.|.| |.+|.+.++.
T Consensus 4 ~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvDYGn~e~v~~~~ 50 (54)
T 3s6w_A 4 PGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSN 50 (54)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEC--CCSEEEEEETTTCCEEEEEGGG
T ss_pred CCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEccCCeEEEeHHH
Confidence 7888999999999999 9999999888899999966 9999998864
No 33
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.11 E-value=0.00082 Score=50.96 Aligned_cols=43 Identities=14% Similarity=0.175 Sum_probs=38.3
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
-||..+..-|. |..|| |+|.+.+.. ++-.|+|+|+.+|.|...
T Consensus 11 kvGd~clA~ws-Dg~~Y~A~I~~v~~~-~~~~V~f~Dyn~e~v~~~ 54 (74)
T 2equ_A 11 KAGEEVLARWT-DCRYYPAKIEAINKE-GTFTVQFYDGVIRCLKRM 54 (74)
T ss_dssp CTTCEEEEECS-SSSEEEEEEEEESTT-SSEEEEETTSCEEEECGG
T ss_pred CCCCEEEEECC-CCCEEEEEEEEECCC-CEEEEEEecCCeEEecHH
Confidence 38999999999 99999 999999876 789999999999988643
No 34
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=97.00 E-value=0.00041 Score=69.82 Aligned_cols=42 Identities=21% Similarity=0.352 Sum_probs=34.6
Q ss_pred ccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCC
Q 017646 187 KSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQF 232 (368)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~ 232 (368)
++-++||||.||+.+. .++ ..+.++|.|+|++||||+++||.
T Consensus 222 ~~D~~NH~~~~~~~~~---~~~-~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 222 AADILNHLANHNANLE---YSA-NCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp TGGGCEECSSCSEEEE---ECS-SEEEEEESSCBCTTCEEEECCSS
T ss_pred cHHHhcCCCCCCeEEE---EeC-CeEEEEECCCcCCCchhhccCCC
Confidence 3568999999998653 333 36889999999999999999986
No 35
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=96.90 E-value=0.00049 Score=68.85 Aligned_cols=47 Identities=23% Similarity=0.374 Sum_probs=35.6
Q ss_pred ccccccCCCCCCcceeEEEECC-------eEEEEEEEccCCCCCCeEEEecCCC
Q 017646 187 KSRYINHSCCPNTEMQKWIIDG-------ETRIGIFATRDIKKGENLTYDYQFV 233 (368)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g-------~~ri~i~A~RdI~~GEELT~dY~~~ 233 (368)
++-++||+|.||.....|.+++ ...+.++|.|+|++||||+++||..
T Consensus 189 ~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~sYG~~ 242 (440)
T 2h21_A 189 MADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQYDLN 242 (440)
T ss_dssp STTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEECSCTT
T ss_pred chHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEeCCCC
Confidence 3557999999986444444432 4578899999999999999999964
No 36
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=96.86 E-value=0.0024 Score=49.95 Aligned_cols=46 Identities=13% Similarity=0.221 Sum_probs=41.5
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeec-CceeEEeccc
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFED-GESEFIDMAK 360 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~d-g~~e~~~l~~ 360 (368)
-+|..+..-|..|..|| ++|.+.++..++.+|.|.| |.+|.+.++.
T Consensus 12 kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN~E~V~~~~ 59 (88)
T 1g5v_A 12 KVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGNREEQNLSD 59 (88)
T ss_dssp CSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETTTCCEEEEEGGG
T ss_pred CCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEecCCCEEEEcHHH
Confidence 38999999999999999 9999999988999999966 9999998764
No 37
>1ssf_A Transformation related protein 53 binding protein 1; tudor domains, tandem, SH3-like fold, beta barrel, alpha- helix, cell cycle; NMR {Mus musculus} SCOP: b.34.9.1 b.34.9.1
Probab=96.76 E-value=0.0023 Score=54.59 Aligned_cols=44 Identities=23% Similarity=0.188 Sum_probs=39.5
Q ss_pred cccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEec
Q 017646 314 CCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDM 358 (368)
Q Consensus 314 ~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l 358 (368)
.+||.||-.-|..|+-|| |.|..+ ....+.+|+||||.+-.|..
T Consensus 9 ~~iG~rVfArWsd~~yyYpG~V~~~-~~~~~Y~V~FdDG~~k~v~~ 53 (156)
T 1ssf_A 9 SFVGLRVVAKWSSNGYFYSGKITRD-VGAGKYKLLFDDGYECDVLG 53 (156)
T ss_dssp CSTTCEEEECSSCSSEEEEEEEEEC-CTTTEEEEECTTSCEEEEET
T ss_pred chhccEEEEEcCCCCcccccEEEEe-ccCCEEEEEEcCCCeeEeec
Confidence 479999999999999999 999995 77788999999999988764
No 38
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=96.56 E-value=0.0061 Score=46.41 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=40.9
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeec-CceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFED-GESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~d-g~~e~~~l~~ 360 (368)
+|..+-.-|..|..|| ++|.+.+...+...|.|.| |.+|.+.++.
T Consensus 20 vGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN~e~V~~~~ 66 (77)
T 3pnw_C 20 PGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGNYEEVLLSN 66 (77)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETTTCCEEEEEGGG
T ss_pred cCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEeHHH
Confidence 8999999999999999 9999999988899999966 9999988754
No 39
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=95.56 E-value=0.00038 Score=53.63 Aligned_cols=42 Identities=14% Similarity=0.203 Sum_probs=37.2
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
+|.++-..|. |..|| ++|.+.+.. ++..|+|+||.+|.+.+.
T Consensus 9 vGd~clAkws-Dg~wY~A~I~~v~~~-~~y~V~F~DGn~E~V~~s 51 (81)
T 2ldm_A 9 INEQVLASWS-DSRFYPAKVTAVNKD-GTYTVKFYDGVVQTVKHI 51 (81)
Confidence 7899999999 99999 999999864 589999999999988765
No 40
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=96.53 E-value=0.0056 Score=46.66 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=41.2
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeec-CceeEEeccc
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFED-GESEFIDMAK 360 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~d-g~~e~~~l~~ 360 (368)
-+|..+-.-|..|..|| ++|.+.+...++..|.|.| |.+|.+.++.
T Consensus 11 ~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN~e~V~~~~ 58 (78)
T 2d9t_A 11 KPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGNYEEVLLSN 58 (78)
T ss_dssp CTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTEEEEEEGGG
T ss_pred CcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCCeEEEcHHH
Confidence 38999999999999999 9999999888899999977 9999998753
No 41
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=96.15 E-value=0.0028 Score=64.61 Aligned_cols=43 Identities=21% Similarity=0.233 Sum_probs=32.6
Q ss_pred ccccccCCCCCCcceeEEEECCeEEEEEEEccCCCCCCeEEEecCC
Q 017646 187 KSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIKKGENLTYDYQF 232 (368)
Q Consensus 187 ~aRfINHSC~PN~~~~~~~~~g~~ri~i~A~RdI~~GEELT~dY~~ 232 (368)
++-++||||.||.. .|..+ ...+.++|.|+|++||||+++||.
T Consensus 272 ~~Dm~NH~~~~~~~--~~~~~-~~~~~~~a~~~i~~Geei~isYG~ 314 (497)
T 3smt_A 272 LWDMCNHTNGLITT--GYNLE-DDRCECVALQDFRAGEQIYIFYGT 314 (497)
T ss_dssp TGGGCEECSCSEEE--EEETT-TTEEEEEESSCBCTTCEEEECCCS
T ss_pred hHHhhcCCCcccce--eeecc-CCeEEEEeCCccCCCCEEEEeCCC
Confidence 34589999999642 23222 346788999999999999999985
No 42
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=96.15 E-value=0.014 Score=42.91 Aligned_cols=45 Identities=13% Similarity=0.271 Sum_probs=40.2
Q ss_pred cccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 314 CCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 314 ~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
--+|.-|+.-| .|-.|| |.|++=|..++.-.|.|+||..-.+..+
T Consensus 14 f~vGddVLA~w-tDGl~Y~gtI~~V~~~~gtC~V~F~D~s~~w~~~k 59 (66)
T 2eqj_A 14 FEEGQDVLARW-SDGLFYLGTIKKINILKQSCFIIFEDSSKSWVLWK 59 (66)
T ss_dssp SCTTCEEEEEC-TTSCEEEEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred ccCCCEEEEEE-ccCcEEEeEEEEEccCCcEEEEEEccCCEEEEEee
Confidence 34899999999 999999 9999999999999999999988766543
No 43
>2eqk_A Tudor domain-containing protein 4; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.75 E-value=0.048 Score=42.13 Aligned_cols=45 Identities=11% Similarity=0.072 Sum_probs=41.8
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~~ 360 (368)
+|..|-+..+.|..|| |.|.+=+..++-|.++||=|.+|.++...
T Consensus 24 ~g~~vaak~~d~n~WyRakV~~v~~~~~veVl~~DyGn~~~V~~~~ 69 (85)
T 2eqk_A 24 NDMHCAVKIQDKNQWRRGQIIRMVTDTLVEVLLYDVGVELVVNVDC 69 (85)
T ss_dssp SSCEEEEECSSSCCEEEEEEEEECSSSEEEEECTTTCCEEEEETTT
T ss_pred CCCEEEEEeCCCCeEEEEEEEEecCCCeEEEEEEccCCEEEEEccc
Confidence 8899999999999999 99999999999999999999999998653
No 44
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=93.24 E-value=0.19 Score=39.13 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=38.3
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEeccc
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMAK 360 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~~ 360 (368)
-+|..+-+.|+.|..|| +.|.+.++ +++-.|.| |=|.+|.+.+++
T Consensus 29 ~~G~~c~a~~~~d~~wyRA~I~~~~~-~~~~~V~fvDyGn~e~v~~~~ 75 (94)
T 3fdr_A 29 HVGDIVAAPLPTNGSWYRARVLGTLE-NGNLDLYFVDFGDNGDCPLKD 75 (94)
T ss_dssp CTTCEEEEEETTTTEEEEEEEEEECT-TSCEEEEETTTCCEEEECGGG
T ss_pred CCCCEEEEEECCCCeEEEEEEEEECC-CCeEEEEEEcCCCeEEEEHHH
Confidence 38999999999999999 99999975 45677888 789999988764
No 45
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=93.07 E-value=0.32 Score=34.62 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=36.6
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
+|+-|=+-|-. .+|| |+|...|.....-.|+|+||.+-...++
T Consensus 6 ~GedVLarwsD-G~fYlGtI~~V~~~~~~clV~F~D~s~~W~~~k 49 (58)
T 4hcz_A 6 EGQDVLARWTD-GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWK 49 (58)
T ss_dssp TTCEEEEECTT-SCEEEEEEEEEETTTTEEEEEETTSCEEEEEGG
T ss_pred cCCEEEEEecC-CCEEeEEEEEEecCCCEEEEEEcCCCeEEEEhH
Confidence 67788888865 6677 9999999999999999999998776554
No 46
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=91.52 E-value=0.24 Score=39.70 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=37.7
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~~ 360 (368)
+|..+-+.|+.|..|| +.|.+.++. ++-.|.| |=|.+|.+.++.
T Consensus 35 ~G~~c~a~~~~d~~wyRA~V~~~~~~-~~~~V~fvDyGn~e~v~~~~ 80 (110)
T 2diq_A 35 VGDIVAAPLPTNGSWYRARVLGTLEN-GNLDLYFVDFGDNGDCPLKD 80 (110)
T ss_dssp TTCEEEECCTTTCSCEEEEECCCCSS-SCEEEEETTTCCEEEECGGG
T ss_pred CCCEEEEEECCCCeEEEEEEEEECCC-CeEEEEEEeCCCeEEEehHH
Confidence 8899999999999999 999999874 5667888 779999998764
No 47
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=89.82 E-value=1.7 Score=31.96 Aligned_cols=46 Identities=17% Similarity=0.281 Sum_probs=35.8
Q ss_pred cccccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEeccc
Q 017646 312 PQCCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMAK 360 (368)
Q Consensus 312 ~~~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~~ 360 (368)
..--+|+.|=+-|-. ..|| |+| -|..+..-.|.|+|..+-...+++
T Consensus 14 ~~~~~geDVL~rw~D-G~fYLGtI--Vd~~~~~ClV~FeD~S~~Wv~~kd 60 (69)
T 2xk0_A 14 VTYALQEDVFIKCND-GRFYLGTI--IDQTSDQYLIRFDDQSEQWCEPDK 60 (69)
T ss_dssp CCCCTTCEEEEECTT-SCEEEEEE--EEECSSCEEEEETTCCEEEECTTT
T ss_pred cccccCCeEEEEecC-CCEEEEEE--EecCCceEEEEecCCcceeeeHHH
Confidence 455689999888876 6667 999 457788999999998877766543
No 48
>2wac_A CG7008-PA; unknown function, tudor, beta-barrel, nuclease domain, tudor P100, SND1, methylated arginine, SDMA, splicing; 2.10A {Drosophila melanogaster}
Probab=88.97 E-value=0.72 Score=40.77 Aligned_cols=43 Identities=14% Similarity=0.349 Sum_probs=37.1
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~~ 360 (368)
+|..+-+.|+.|..|| |.|.+.+. ..-+|.| |.|.+|.+.++.
T Consensus 54 ~g~~c~a~~~~d~~wyRa~V~~v~~--~~~~V~~vDyG~~~~v~~~~ 98 (218)
T 2wac_A 54 RGDLVAAQFTLDNQWYRAKVERVQG--SNATVLYIDYGNKETLPTNR 98 (218)
T ss_dssp TTCEEEEECTTTCCEEEEEEEEEET--TEEEEEETTTCCEEEEEGGG
T ss_pred cCCEEEEEECCCCeEEEEEEEEecC--CeEEEEEEecCCeEEEchHH
Confidence 8999999999999999 99999877 7788888 559999987543
No 49
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=88.91 E-value=0.37 Score=47.67 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=30.8
Q ss_pred cccEEEEEecCCCcEEEecccCCCCcEEEEEcceee
Q 017646 113 VKKMKLVQTEKCGAGIVADEDIKRGEFVIEYVGEVI 148 (368)
Q Consensus 113 ~~~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Gevi 148 (368)
..+++.+.++++|+||+|+++|++|++|+.....+.
T Consensus 4 ~~~i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P~~~ 39 (429)
T 3qwp_A 4 PLKVEKFATANRGNGLRAVTPLRPGELLFRSDPLAY 39 (429)
T ss_dssp CCSEEEEECSSSSEEEEESSCBCTTCEEEEECCSEE
T ss_pred ccceeecccCCCCCeEEeCCCCCCCCEEEecCCcee
Confidence 357888889999999999999999999987665543
No 50
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=88.30 E-value=3.6 Score=30.82 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=39.4
Q ss_pred CcccccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 311 CPQCCIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
-..--+|+-|=+-|- |.+|| |.|+.-|.....-.|.|+|+.+-....+
T Consensus 24 ~~~f~eGeDVLarws-DGlfYLGTI~kV~~~~e~ClV~F~D~S~~W~~~k 72 (79)
T 2m0o_A 24 RPRLWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWK 72 (79)
T ss_dssp CCCCCTTCEEEBCCT-TSCCCEEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred cceeccCCEEEEEec-CCCEEeEEEEEeccCCCEEEEEEcCCCeEEEEee
Confidence 345568999999885 56667 9999999999999999999988766544
No 51
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.05 E-value=3.7 Score=29.95 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=36.7
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
-+|+-|=+-|-. -.|| |.|+.-|.....-.|+|+|+.+-....+
T Consensus 11 ~eGqdVLarWsD-GlfYlGtV~kV~~~~~~ClV~FeD~s~~wv~~k 55 (68)
T 2e5p_A 11 WEGQDVLARWTD-GLLYLGTIKKVDSAREVCLVQFEDDSQFLVLWK 55 (68)
T ss_dssp CTTCEEEEECTT-SSEEEEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred ccCCEEEEEecC-CcEEEeEEEEEecCCcEEEEEEccCCeeeeeee
Confidence 478888887865 7777 9999999999999999999987766543
No 52
>3ntk_A Maternal protein tudor; tudor domain, OB-fold, GERM cell formation, transcription; 1.80A {Drosophila melanogaster} PDB: 3nth_A* 3nti_A*
Probab=81.92 E-value=2.2 Score=36.59 Aligned_cols=41 Identities=22% Similarity=0.308 Sum_probs=35.0
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEE
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFI 356 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~ 356 (368)
-+|..+-+.|+.|..|| |.|.+.++.. +-.|.| |=|.+|.+
T Consensus 49 ~~G~~c~A~~~~d~~wyRa~I~~~~~~~-~~~V~fvDyGn~~~v 91 (169)
T 3ntk_A 49 KEGALCVAQFPEDEVFYRAQIRKVLDDG-KCEVHFIDFGNNAVT 91 (169)
T ss_dssp CTTCEEEEEETTTTEEEEEEEEEECSTT-CEEEEETTTTEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEEEEECCCC-EEEEEEEecCCeEEh
Confidence 38999999999999999 9999998855 778888 77888873
No 53
>2hqx_A P100 CO-activator tudor domain; human P100 tudor domain, proteolytic fragment, PSI, structural genomics; 1.42A {Homo sapiens} SCOP: b.34.9.1 PDB: 2hqe_A 3omc_A* 3omg_A* 2o4x_A 2e6n_A 2o4x_B
Probab=81.44 E-value=2.2 Score=38.57 Aligned_cols=42 Identities=12% Similarity=0.239 Sum_probs=35.0
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEecc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMA 359 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~ 359 (368)
+|..+-+.|. |..|| |.|.+.++. ..-.|.| |-|.+|.+.++
T Consensus 68 ~G~~c~a~~~-d~~wyRa~V~~~~~~-~~~~V~~vDyGn~~~v~~~ 111 (246)
T 2hqx_A 68 RGEFCIAKFV-DGEWYRARVEKVESP-AKIHVFYIDYGNREVLPST 111 (246)
T ss_dssp TTCEEEEECT-TSCEEEEEEEEEEET-TEEEEEETTTCCEEEECGG
T ss_pred CCCEEEEEcC-CCCEEEEEEEEEcCC-CeEEEEEEeCCCeEEEeHH
Confidence 8999999888 99999 999999764 4778888 55999998654
No 54
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=80.11 E-value=2.5 Score=34.72 Aligned_cols=46 Identities=24% Similarity=0.242 Sum_probs=34.3
Q ss_pred cceEEEeeecCCceeeEEEeeeeCCCCeEEEEeecCceeEEeccccceE
Q 017646 316 IGKVIRISHPKNESSFGIIRRFDEYSRKHSVLFEDGESEFIDMAKVDWE 364 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~g~v~~~~~~~~~h~~~y~dg~~e~~~l~~e~~~ 364 (368)
.|..|+|-|+..+.|=|...+... +.+.+|.||||. .+.|++++.-
T Consensus 67 ~G~~V~V~W~DG~~y~a~f~g~~~-~~~YtV~FeDgs--~~~~kR~~iy 112 (123)
T 2xdp_A 67 EGEVVQVKWPDGKLYGAKYFGSNI-AHMYQVEFEDGS--QIAMKREDIY 112 (123)
T ss_dssp TTCEEEEECTTSCEEEEEEEEEEE-EEEEEEECTTSC--EEEEEGGGCC
T ss_pred CCCEEEEEcCCCCEEeEEEeeeee-EEEEEEEECCCC--eEEecHHHcc
Confidence 899999999998874465554432 457789999996 6677777653
No 55
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=80.09 E-value=3.9 Score=33.32 Aligned_cols=48 Identities=17% Similarity=0.147 Sum_probs=35.5
Q ss_pred cceEEEeeecCCceeeEEEeeeeCCCCeEEEEeecCceeEEeccccceEec
Q 017646 316 IGKVIRISHPKNESSFGIIRRFDEYSRKHSVLFEDGESEFIDMAKVDWELV 366 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~g~v~~~~~~~~~h~~~y~dg~~e~~~l~~e~~~~~ 366 (368)
.|..|+|-|+..+.|=|...+... +.+.+|.|+||. .+.|++++.-..
T Consensus 66 ~G~~V~V~W~DG~~y~a~f~g~~~-~~~Y~V~feDgs--~~~~kR~~iyt~ 113 (118)
T 2qqr_A 66 EGEVVQVRWTDGQVYGAKFVASHP-IQMYQVEFEDGS--QLVVKRDDVYTL 113 (118)
T ss_dssp TTCEEEEECTTSCEEEEEEEEEEE-EEEEEEEETTSC--EEEECGGGEEET
T ss_pred CCCEEEEEcCCCCEeeeEEeceeE-EEEEEEEECCCC--EEEEcHHHeecc
Confidence 899999999998874355544332 457789999998 477888876544
No 56
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=78.02 E-value=1.8 Score=43.74 Aligned_cols=32 Identities=25% Similarity=0.338 Sum_probs=28.2
Q ss_pred cEEEEEecCCCcEEEecccCCCCcEEEEEcce
Q 017646 115 KMKLVQTEKCGAGIVADEDIKRGEFVIEYVGE 146 (368)
Q Consensus 115 ~l~v~~s~~kG~GlfA~~~I~~G~~I~ey~Ge 146 (368)
.++|...++.|+||+|+++|++|+.|+...-.
T Consensus 94 ~v~i~~~~~~GrGl~A~~dI~~ge~ll~IP~~ 125 (497)
T 3smt_A 94 GFEMVNFKEEGFGLRATRDIKAEELFLWVPRK 125 (497)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEEEEGG
T ss_pred ceEEEEcCCCccEEEEcccCCCCCEEEEcCHH
Confidence 68888899999999999999999998877444
No 57
>4b9w_A TDRD1, tudor domain-containing protein 1; replication; HET: 2MR; 2.10A {Mus musculus}
Probab=77.68 E-value=4 Score=35.85 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=36.6
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~~ 360 (368)
+|..+-+.++.|..|| |.|.+..+. ++-+|.| |=|.+|.+.+++
T Consensus 68 ~G~~c~a~~~~d~~wyRa~V~~~~~~-~~~~V~~vDyG~~~~v~~~~ 113 (201)
T 4b9w_A 68 IGRPCCAFFSGDGNWYRALVKEILPS-GNVKVHFVDYGNVEEVTTDQ 113 (201)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEECTT-SCEEEEETTTCCEEEECGGG
T ss_pred CCCEEEEEECCCCeEEEEEEEEECCC-CeEEEEEEccCCEEEEEHHH
Confidence 7888999999999999 999998764 4567777 889999887653
No 58
>4b9x_A TDRD1, tudor domain-containing protein 1; replication; 2.80A {Mus musculus}
Probab=73.79 E-value=4.6 Score=36.14 Aligned_cols=44 Identities=14% Similarity=0.215 Sum_probs=37.1
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~~ 360 (368)
+|..+-+.++.|..|| |.|.+..+. ++-+|.| |=|.+|.+.+++
T Consensus 68 ~G~~c~a~~~~d~~WyRa~V~~~~~~-~~~~V~~vDyGn~~~v~~~~ 113 (226)
T 4b9x_A 68 IGRPCCAFFSGDGNWYRALVKEILPS-GNVKVHFVDYGNVEEVTTDQ 113 (226)
T ss_dssp TTCEEEEEETTTTEEEEEEEEEECSS-SEEEEECTTTCCEEEEEGGG
T ss_pred CCCEEEEEECCCCeEEEEEEEEECCC-CeEEEEEEecCCEEEEEHHH
Confidence 7888999999999999 999998764 5677888 889999987654
No 59
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.48 E-value=9.8 Score=27.32 Aligned_cols=43 Identities=19% Similarity=0.277 Sum_probs=35.7
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEecc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~ 359 (368)
+|.-|=+-|- |-.|| |.|+.-|.....-.|+|+|+.+-.+..+
T Consensus 10 eGqdVLarWs-DGlfYlgtV~kV~~~~~~ClV~FeD~s~~wv~~k 53 (63)
T 2e5q_A 10 EGQYVLCRWT-DGLYYLGKIKRVSSSKQSCLVTFEDNSKYWVLWK 53 (63)
T ss_dssp TTCEEEEECT-TSCEEEEEECCCCSTTSEEEEEETTSCEEEEEGG
T ss_pred cCCEEEEEec-CCCEEEEEEEEEecCCCEEEEEEccCceeEEEee
Confidence 6788877775 56677 9999999999999999999988766554
No 60
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=69.87 E-value=3.9 Score=31.46 Aligned_cols=32 Identities=22% Similarity=0.177 Sum_probs=25.9
Q ss_pred ccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 313 QCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
.++||+.|+|-=-..+.|.|+|.+||+.+-.=
T Consensus 13 ~~li~KeV~V~l~dg~~y~G~l~tvDp~s~sI 44 (86)
T 1y96_A 13 QDYIYKEVRVTASEKNEYKGWVLTTDPVSANI 44 (86)
T ss_dssp HHTTTCEEEEEETTTEEEEEEEEEECTTTCCE
T ss_pred HhhcCCEEEEEEcCCCEEEEEEEEECCCceEE
Confidence 46899999998776666669999999877543
No 61
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=67.83 E-value=4.6 Score=32.90 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=30.4
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCcee
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESE 354 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e 354 (368)
-||.+|..-|+ +.+|| |.|.+= ...--+.|.|+||--=
T Consensus 7 ~vGq~V~akh~-ngryy~~~V~~~-~~~~~y~V~F~DgS~s 45 (118)
T 2qqr_A 7 TAGQKVISKHK-NGRFYQCEVVRL-TTETFYEVNFDDGSFS 45 (118)
T ss_dssp CTTCEEEEECT-TSSEEEEEEEEE-EEEEEEEEEETTSCEE
T ss_pred ccCCEEEEECC-CCCEEeEEEEEE-eeEEEEEEEcCCCCcc
Confidence 38999999998 78888 999885 3346788999999653
No 62
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=67.47 E-value=3.4 Score=41.12 Aligned_cols=33 Identities=24% Similarity=0.423 Sum_probs=26.6
Q ss_pred cEEEEEe-cCCCcEEEecccCCCCcEEEEEccee
Q 017646 115 KMKLVQT-EKCGAGIVADEDIKRGEFVIEYVGEV 147 (368)
Q Consensus 115 ~l~v~~s-~~kG~GlfA~~~I~~G~~I~ey~Gev 147 (368)
+++|... +..|+||+|+++|++|+.|+...-.+
T Consensus 39 ~v~i~~~~~~~G~Gv~A~~dI~~ge~ll~IP~~~ 72 (449)
T 3qxy_A 39 KVAVSRQGTVAGYGMVARESVQAGELLFVVPRAA 72 (449)
T ss_dssp TEEEESSSCSSSSEEEESSCBCTTCEEEEEEGGG
T ss_pred ceEEEecCCCceEEEEECCCCCCCCEEEEeCcHH
Confidence 5777764 47899999999999999998775443
No 63
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=65.62 E-value=16 Score=30.16 Aligned_cols=45 Identities=11% Similarity=0.223 Sum_probs=33.3
Q ss_pred ccccceEEEeeecCCc----eee-EEEeeeeCCCCeEEEEeecCc---eeEEecc
Q 017646 313 QCCIGKVIRISHPKNE----SSF-GIIRRFDEYSRKHSVLFEDGE---SEFIDMA 359 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~----~~~-g~v~~~~~~~~~h~~~y~dg~---~e~~~l~ 359 (368)
+-.+|..|.||+..+. .|| |+|+..-. ..+.|-|++-+ .|++.+.
T Consensus 60 ~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg--~f~~V~y~~~~~~~~EiV~~~ 112 (128)
T 3h8z_A 60 EITEGDEVEVYSRANEQEPCGWWLARVRMMKG--DFYVIEYAACDATYNEIVTLE 112 (128)
T ss_dssp CCCTTCEEEEEECC---CCCEEEEEEEEEEET--TEEEEEETTC----CEEECGG
T ss_pred CCCCCCEEEEEecCCCCCcCccEEEEEEEeeC--CEEEEEEcCCCCCcceEEehh
Confidence 3469999999999988 799 99988874 68999987733 4666543
No 64
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=65.04 E-value=2 Score=33.57 Aligned_cols=35 Identities=20% Similarity=0.306 Sum_probs=29.0
Q ss_pred CCCcccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 309 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 309 ~~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
..+-.+++|++|.|.--.++.|-|++++||..-..
T Consensus 22 l~lL~~~l~k~V~V~Lk~gr~~~G~L~gfD~~mNl 56 (94)
T 4emk_A 22 LELIDKCIGSNLWVIMKSEREFAGTLVGFDDYVNI 56 (94)
T ss_dssp HHHHHHTTTSEEEEEESSSEEEEEEEEEECTTCCE
T ss_pred HHHHHHHcCCeEEEEECCCcEEEEEEEEEcccCCe
Confidence 34778899999999988777655999999998764
No 65
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=64.26 E-value=5.9 Score=30.71 Aligned_cols=37 Identities=11% Similarity=0.072 Sum_probs=27.0
Q ss_pred CCCCcccccceEEEeeecCC-ceeeEEEeeeeCCCCeE
Q 017646 308 RQICPQCCIGKVIRISHPKN-ESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 308 ~~~~~~~~vg~~~~~~~~~d-~~~~g~v~~~~~~~~~h 344 (368)
.......++|++|.||=-.+ ..|-|++++||..-...
T Consensus 22 P~~~L~~~i~k~V~V~Lk~g~~~~~G~L~~~D~~MNlv 59 (93)
T 1n9r_A 22 PKPFLKGLVNHRVGVKLKFNSTEYRGTLVSTDNYFNLQ 59 (93)
T ss_dssp ----CGGGTTSEEEEEESSTTEEEEEEEEECCTTTCEE
T ss_pred hHHHHHHhCCCEEEEEEcCCCEEEEEEEEEEccccEEE
Confidence 34566788999999998777 45449999999987743
No 66
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=62.87 E-value=8.9 Score=28.20 Aligned_cols=32 Identities=6% Similarity=0.008 Sum_probs=26.1
Q ss_pred cccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 312 PQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 312 ~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
...++|++|.|+=-.++.|.|++++||..-..
T Consensus 9 L~~~~~~~V~V~L~~g~~~~G~L~~~D~~mNl 40 (77)
T 1i4k_A 9 LNRSLKSPVIVRLKGGREFRGTLDGYDIHMNL 40 (77)
T ss_dssp HHTTTTSEEEEEETTSCEEEEEEEEECTTCCE
T ss_pred HHHhCCCEEEEEEcCCCEEEEEEEEEcCCCCe
Confidence 34679999999988776655999999988763
No 67
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=62.57 E-value=6.5 Score=29.59 Aligned_cols=36 Identities=11% Similarity=0.059 Sum_probs=28.4
Q ss_pred CCCcccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 309 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 309 ~~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
...-..++|++|.|+=-.++.|.|++++||..-..+
T Consensus 17 ~~~L~~~~~~~V~V~Lk~g~~~~G~L~~~D~~mNlv 52 (83)
T 1mgq_A 17 LDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLV 52 (83)
T ss_dssp THHHHHTTTSEEEEEETTTEEEEEEEEEECTTCCEE
T ss_pred HHHHHHhCCCEEEEEEcCCcEEEEEEEEECCCceeE
Confidence 345677899999998877666559999999987743
No 68
>3bdl_A Staphylococcal nuclease domain-containing protein 1; staphylococcal nuclease OB fold, tudor domain, cytoplasm, HOST-virus interaction, nucleus; HET: CIT; 1.90A {Homo sapiens}
Probab=60.91 E-value=11 Score=38.56 Aligned_cols=43 Identities=12% Similarity=0.281 Sum_probs=36.9
Q ss_pred cceEEEeeecCCceee-EEEeeeeCCCCeEEEEe-ecCceeEEeccc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLF-EDGESEFIDMAK 360 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y-~dg~~e~~~l~~ 360 (368)
+|..+-+.|. |..|| +.|.+.++ .++-.|.| |=|.+|.+.++.
T Consensus 414 ~G~~c~a~~~-d~~wyRa~I~~v~~-~~~~~V~fvDyGn~e~v~~~~ 458 (570)
T 3bdl_A 414 RGEFCIAKFV-DGEWYRARVEKVES-PAKIHVFYIDYGNREVLPSTR 458 (570)
T ss_dssp TTCEEEEECT-TSCEEEEEEEEEEE-TTEEEEEETTTCCEEEECGGG
T ss_pred cCCEEEEEEC-CCCEEEEEEEEEcC-CCeEEEEEEeCCCeEEEEHHH
Confidence 8999999998 99999 99999987 56778888 669999987653
No 69
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=60.68 E-value=7.5 Score=30.88 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=24.0
Q ss_pred CCCcccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 309 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 309 ~~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
..+..+++|++|.|+--.+..|-|++.+||..-...
T Consensus 18 ~~lL~~~igk~V~V~Lk~G~~~~G~L~~~D~~MNlv 53 (105)
T 4emh_A 18 LTLLNATQGRPILVELKNGETFNGHLENCDNYMNLT 53 (105)
T ss_dssp --------CCEEEEEETTSCEEEEEEEEECTTCCEE
T ss_pred HHHHHHhCCCEEEEEECCCCEEEEEEEEEcCCceEE
Confidence 445678899999999888777559999999988754
No 70
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=58.48 E-value=17 Score=32.54 Aligned_cols=46 Identities=13% Similarity=0.359 Sum_probs=34.5
Q ss_pred ccceEEEeeecCCc--eee-EEEeeeeCCC--CeEEEEeecCceeEEeccc
Q 017646 315 CIGKVIRISHPKNE--SSF-GIIRRFDEYS--RKHSVLFEDGESEFIDMAK 360 (368)
Q Consensus 315 ~vg~~~~~~~~~d~--~~~-g~v~~~~~~~--~~h~~~y~dg~~e~~~l~~ 360 (368)
.||.||=..|.... .|| |+|--=+... -.+.|.||||...-+.+.+
T Consensus 70 ~vG~RVVA~~~~~~~~~fY~GiVaE~p~~~N~~RyLVFFDDG~~~Yv~~~~ 120 (213)
T 3dlm_A 70 YVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDGYASYVTQSE 120 (213)
T ss_dssp CTTCEEEEEEECSSCEEEEEEEEEECCCTTTTSCEEEEETTSCEEEECGGG
T ss_pred eEEEEEEEEecCCCCcceeeeEEEECCccCCCceEEEEEeCCCcceecCce
Confidence 39999999998653 588 9886544432 2788999999998877654
No 71
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=57.63 E-value=3.8 Score=33.63 Aligned_cols=38 Identities=18% Similarity=0.348 Sum_probs=30.9
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCcee
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESE 354 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e 354 (368)
-||.+|..-|+ +.+|| |.|.+=.. .-.+.|.|+||-.=
T Consensus 8 ~vGq~V~ak~~-ngryy~~~V~~~~~-~~~y~V~F~DgS~s 46 (123)
T 2xdp_A 8 SVGQTVITKHR-NTRYYSCRVMAVTS-QTFYEVMFDDGSFS 46 (123)
T ss_dssp CTTCCCCCCCC-CCCCCCCEEEEEEE-EEEEEEEETTSCEE
T ss_pred ccCCEEEEECC-CCcEEeEEEEEEee-EEEEEEEcCCCCcc
Confidence 38888888888 58889 99988774 56789999999754
No 72
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=54.02 E-value=14 Score=26.94 Aligned_cols=31 Identities=13% Similarity=0.012 Sum_probs=25.4
Q ss_pred ccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 313 QCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
..++|++|.|.=-.++.|-|++++||..-..
T Consensus 10 ~~~~~~~V~V~l~~g~~~~G~L~~~D~~mNl 40 (75)
T 1h64_1 10 HRSLDKDVLVILKKGFEFRGRLIGYDIHLNV 40 (75)
T ss_dssp HTTTTSEEEEEETTSEEEEEEEEEECTTCCE
T ss_pred HHHCCCEEEEEECCCCEEEEEEEEEeCCCCe
Confidence 4679999999987766655999999988773
No 73
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=53.90 E-value=12 Score=28.36 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=27.7
Q ss_pred CcccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 311 CPQCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
...+++|++|.|+--.+..|.|++.+||..-..+
T Consensus 10 ~L~~~~~k~V~V~Lk~g~~~~G~L~~~D~~mNlv 43 (86)
T 3s6n_F 10 FLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQ 43 (86)
T ss_dssp HHHHHTTSEEEEEETTSCEEEEEEEEECTTCCEE
T ss_pred HHHHhCCCeEEEEEcCCeEEEEEEEEEcCceEEE
Confidence 4467899999999887766559999999987643
No 74
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=53.13 E-value=13 Score=27.34 Aligned_cols=31 Identities=26% Similarity=0.309 Sum_probs=25.1
Q ss_pred ccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 313 QCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
.+++|++|.|+--.++.|.|++.+||..-..
T Consensus 10 ~~~~~k~V~V~Lk~g~~~~G~L~~~D~~mNl 40 (75)
T 4emk_B 10 NKVIGKKVLIRLSSGVDYKGILSCLDGYMNL 40 (75)
T ss_dssp HHTTTSEEEEECTTSCEEEEEEEEECTTCEE
T ss_pred HHhCCCeEEEEEcCCcEEEEEEEEEcCcceE
Confidence 4679999999887766655999999997653
No 75
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=51.78 E-value=11 Score=29.17 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=26.7
Q ss_pred CcccccceEEEeeecCCceeeEEEeeeeCCCC
Q 017646 311 CPQCCIGKVIRISHPKNESSFGIIRRFDEYSR 342 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~ 342 (368)
....++|++|+|.=..++.+.|++++||..-.
T Consensus 14 ~L~~~i~k~V~V~Lk~gr~~~G~L~~fD~~mN 45 (96)
T 3bw1_A 14 LLKLNLDERVYIKLRGARTLVGTLQAFDSHCN 45 (96)
T ss_dssp HHGGGTTSEEEEEEGGGCEEEEEEEEECTTCC
T ss_pred HHHHHCCCeEEEEECCCcEEEEEEEEECCCCc
Confidence 44678999999998877765599999998876
No 76
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=51.64 E-value=12 Score=27.84 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=25.8
Q ss_pred CcccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 311 CPQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
.-..++|++|.|+=-.++.|.|++++||..-..
T Consensus 15 ~L~~~~~~~V~V~l~~g~~~~G~L~~~D~~mNl 47 (81)
T 1i8f_A 15 TLQDSIGKQVLVKLRDSHEIRGILRSFDQHVNL 47 (81)
T ss_dssp HHHTTTTSEEEEEEGGGEEEEEEEEEECTTCCE
T ss_pred HHHHHCCCeEEEEEcCCcEEEEEEEEEcCCCee
Confidence 345679999999877665555999999998763
No 77
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=51.30 E-value=21 Score=27.07 Aligned_cols=34 Identities=15% Similarity=0.044 Sum_probs=27.6
Q ss_pred CCcccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 310 ICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 310 ~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
.....++|++|+|.--.++.|.|++++||..-..
T Consensus 7 ~~L~~~~~k~V~V~l~~gr~~~G~L~~~D~~mNl 40 (91)
T 1d3b_B 7 SKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNL 40 (91)
T ss_dssp CCCGGGTTSEEEEEETTCCEEEEEEEECCTTCCE
T ss_pred HHHHHHcCCcEEEEECCCeEEEEEEEEECCCCeE
Confidence 4456789999999987766655999999988764
No 78
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=50.64 E-value=10 Score=37.18 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=21.0
Q ss_pred CCCcEEEecccCCCCcEEEEEcce
Q 017646 123 KCGAGIVADEDIKRGEFVIEYVGE 146 (368)
Q Consensus 123 ~kG~GlfA~~~I~~G~~I~ey~Ge 146 (368)
..|+||+|+++|++|+.|+...-.
T Consensus 31 ~~GrGl~A~~~I~~ge~ll~IP~~ 54 (440)
T 2h21_A 31 TEGLGLVALKDISRNDVILQVPKR 54 (440)
T ss_dssp TTEEEEEESSCBCTTEEEEEEEGG
T ss_pred CCCCEEEEcccCCCCCEEEEeChh
Confidence 479999999999999999877555
No 79
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=49.24 E-value=19 Score=26.43 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=23.5
Q ss_pred CCCcccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 309 QICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 309 ~~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
.....+++|++|+|-=-.++.|.|++.+||..-..+
T Consensus 6 ~~~L~~~~~k~V~V~Lk~gr~~~G~L~~~D~~mNlv 41 (76)
T 3s6n_G 6 PPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLV 41 (76)
T ss_dssp --------CCEEEEEETTTEEEEEEEEEECTTCCEE
T ss_pred hHHHHHhCCCeEEEEECCCcEEEEEEEEECCcceEE
Confidence 345567899999999887776559999999887643
No 80
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.42 E-value=5.8 Score=29.78 Aligned_cols=17 Identities=35% Similarity=0.470 Sum_probs=15.1
Q ss_pred EEEEccCCCCCCeEEEe
Q 017646 213 GIFATRDIKKGENLTYD 229 (368)
Q Consensus 213 ~i~A~RdI~~GEELT~d 229 (368)
.++|.|||++||-||-+
T Consensus 8 slvA~rdI~~Gevit~~ 24 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMD 24 (79)
T ss_dssp EEEESSCBCTTCBCCGG
T ss_pred EEEEeCccCCCCCcCHH
Confidence 57999999999999965
No 81
>2l7y_A Putative endo-beta-N-acetylglucosaminidase; putative surface protein, structural protein; NMR {Streptococcus pneumoniae}
Probab=46.99 E-value=23 Score=27.77 Aligned_cols=43 Identities=14% Similarity=0.166 Sum_probs=33.3
Q ss_pred EEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEeccccce
Q 017646 319 VIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFIDMAKVDW 363 (368)
Q Consensus 319 ~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~l~~e~~ 363 (368)
.|.|--+..+.|. |. .+|..-.+=++.|+||..+.+.|..+..
T Consensus 8 ~iei~~~P~k~Y~vGE--~LDltGl~v~~~YsDgt~~~~~lt~~~v 51 (98)
T 2l7y_A 8 GIEVSQEPKKDYLVGD--SLDLSEGRFAVAYSNDTMEEHSFTDEGV 51 (98)
T ss_dssp EEEECCCSCCEEETTT--CCCCCSCEEEEEETTSCEEEEESCCTTS
T ss_pred EEEEEcCCCcEEecCC--ccccCCCEEEEEEcCCCEEEEecccCCc
Confidence 3555666667755 64 7888899999999999999999888743
No 82
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=46.88 E-value=16 Score=28.11 Aligned_cols=34 Identities=9% Similarity=0.133 Sum_probs=26.4
Q ss_pred CCcccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 310 ICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 310 ~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
.+...++|++|+|.--.++.|.|++++||..-..
T Consensus 12 ~lL~~~~~~~V~V~l~~gr~~~G~L~~~D~~mNl 45 (93)
T 4emg_A 12 DLVRLSLDEIVYVKLRGDRELNGRLHAYDEHLNM 45 (93)
T ss_dssp HHHHTTTTSEEEEEETTTEEEEEEEEEECTTCCE
T ss_pred HHHHHhCCCEEEEEECCCcEEEEEEEEECCcccE
Confidence 4556779999999986655544999999998653
No 83
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=46.52 E-value=22 Score=26.06 Aligned_cols=31 Identities=23% Similarity=0.479 Sum_probs=24.9
Q ss_pred ccccceEEEeeecCC-ceeeEEEeeeeCCCCe
Q 017646 313 QCCIGKVIRISHPKN-ESSFGIIRRFDEYSRK 343 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d-~~~~g~v~~~~~~~~~ 343 (368)
..++|++|+|.=-.+ ..+.|++++||..-..
T Consensus 11 ~~~~~~~v~V~lk~g~~~~~G~L~~~D~~mNl 42 (77)
T 1ljo_A 11 KSMVGKIIRVEMKGEENQLVGKLEGVDDYMNL 42 (77)
T ss_dssp HHTTTSEEEEEETTCSSEEEEEEEEECTTCCE
T ss_pred HHHCCCEEEEEEeCCCEEEEEEEEEECCcceE
Confidence 467999999998766 4544999999998764
No 84
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=45.90 E-value=23 Score=28.54 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=26.1
Q ss_pred ccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 313 QCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
.+++|++|.||--.+..|.|++.+||..-..+
T Consensus 8 ~~~~gk~V~V~Lk~g~~~~G~L~~~D~~MNlv 39 (119)
T 1b34_A 8 MKLSHETVTIELKNGTQVHGTITGVDVSMNTH 39 (119)
T ss_dssp HTCTTCEEEEEETTCCEEEEEEEEECTTCCEE
T ss_pred HHhCCCEEEEEEcCCCEEEEEEEEEcccceEE
Confidence 46799999999876666559999999987744
No 85
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=45.65 E-value=18 Score=26.81 Aligned_cols=32 Identities=13% Similarity=0.256 Sum_probs=25.5
Q ss_pred cccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 312 PQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 312 ~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
-..++|++|.|.=-.++.|-|++++||..-..
T Consensus 14 L~~~~~~~V~V~l~~g~~~~G~L~~~D~~mNl 45 (81)
T 1th7_A 14 LAESLNNLVLVKLKGNKEVRGMLRSYDQHMNL 45 (81)
T ss_dssp HHHHTTSEEEEEETTTEEEEEEEEEECTTCCE
T ss_pred HHHhCCCeEEEEEcCCcEEEEEEEEEcCCCCE
Confidence 35679999999887665544999999998773
No 86
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=43.75 E-value=20 Score=28.67 Aligned_cols=34 Identities=15% Similarity=0.197 Sum_probs=23.8
Q ss_pred CCcccccceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 310 ICPQCCIGKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 310 ~~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
.....++|++|+|---.++.|.|++++||..-..
T Consensus 26 ~~L~~~l~k~V~V~L~dGr~~~G~L~~fD~~mNL 59 (113)
T 4emk_C 26 LDLSRYQDQRIQATFTGGRQITGILKGFDQLMNL 59 (113)
T ss_dssp ------CCSEEEEEETTSCEEEEEEEEECTTCCE
T ss_pred HHHHHHcCCcEEEEEeCCeEEEEEEEEEcCcccE
Confidence 3556789999999987766655999999998763
No 87
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=42.72 E-value=68 Score=26.99 Aligned_cols=44 Identities=11% Similarity=0.022 Sum_probs=31.3
Q ss_pred ccceEEEeeecCCce-ee-EEEeeee----CCCCeEEEEeecCceeEEec
Q 017646 315 CIGKVIRISHPKNES-SF-GIIRRFD----EYSRKHSVLFEDGESEFIDM 358 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~-~~-g~v~~~~----~~~~~h~~~y~dg~~e~~~l 358 (368)
.|--||=..|+.-++ || ++...=. -.+.+-+|.|||+.+-.+|+
T Consensus 7 ~~~NrVfAff~G~p~~YYPATcvg~~~~~~~~~~~y~VrFdDs~~~~V~~ 56 (153)
T 2fhd_A 7 SFKNRVLAFFKGYPSFYYPATLVAPVHSAVTSSIMYKVQFDDATMSTVNS 56 (153)
T ss_dssp CGGGEEEEECCSSSCCEEEEEEEEEECCSSCCBCEEEEEETTSCEEEEET
T ss_pred cccceEEEEcCCCcccccceEEEccCCCcccCCeEEEEEEcCCCCCccCh
Confidence 346688899997666 66 7544443 37889999999996556443
No 88
>1t2y_A Metallothionein, MT; protein fold, no secondary structural elements, metal binding protein; NMR {Synthetic} SCOP: g.46.1.1
Probab=40.00 E-value=16 Score=21.52 Aligned_cols=18 Identities=39% Similarity=1.125 Sum_probs=11.2
Q ss_pred ccccCCCCCCCCCCCCCCcc
Q 017646 68 CSCTASPGSSGVCDRDCHCG 87 (368)
Q Consensus 68 C~C~~~~~~~~~C~~~C~c~ 87 (368)
|.|.. .+++.|+.+|.|.
T Consensus 3 CgCs~--tgtC~Cg~~CsC~ 20 (26)
T 1t2y_A 3 CGCSG--ASSCNCGSGCSCS 20 (26)
T ss_dssp CSCSS--TTTCCCSSSCCSS
T ss_pred cccCC--CccccCCCCcccc
Confidence 56665 4456677777664
No 89
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=36.42 E-value=34 Score=28.11 Aligned_cols=32 Identities=13% Similarity=0.231 Sum_probs=25.8
Q ss_pred ccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 313 QCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 313 ~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
..++|++|.|+--.+..|-|++.+||..-..+
T Consensus 6 ~~~igk~V~V~Lk~G~~~~G~L~~~D~~MNlv 37 (130)
T 1m5q_A 6 NNLLGREVQVVLSNGEVYKGVLHAVDNQLNIV 37 (130)
T ss_dssp HHTTTSEEEEEETTSCEEEEEEEEECTTCCEE
T ss_pred HHhCCCeEEEEECCCcEEEEEEEEEcccceeE
Confidence 46799999998877766559999999887643
No 90
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=41.32 E-value=8.1 Score=31.23 Aligned_cols=41 Identities=20% Similarity=0.395 Sum_probs=29.3
Q ss_pred ccceEEEeeecCCceee-EEEeeeeCCCCeEEEEeecCceeEEe
Q 017646 315 CIGKVIRISHPKNESSF-GIIRRFDEYSRKHSVLFEDGESEFID 357 (368)
Q Consensus 315 ~vg~~~~~~~~~d~~~~-g~v~~~~~~~~~h~~~y~dg~~e~~~ 357 (368)
-+|..|-+-.|. ..|. |+|..---. ...+|+|||||+..|.
T Consensus 58 ~vG~~ve~~~~~-~~~~~~~I~~i~D~-S~YtVVFdDGD~ktLr 99 (118)
T 2lcd_A 58 RVGAIVETRTSD-GSFQEAIISKLTDA-SWYTVVFDDGDERTLR 99 (118)
Confidence 388899999984 4666 877544332 3578999999998653
No 91
>1c9o_A CSPB, cold-shock protein; beta barrel, homodimer, transcription; 1.17A {Bacillus caldolyticus} SCOP: b.40.4.5 PDB: 2hax_A 1hz9_A 1hzb_A 1i5f_A 1hza_A 1hzc_A 3pf4_A 1csq_A 1nmf_A 1nmg_A 1csp_A 2f52_A 2es2_A 3pf5_A 2i5m_X 2i5l_X
Probab=34.02 E-value=46 Score=23.65 Aligned_cols=21 Identities=19% Similarity=0.262 Sum_probs=17.3
Q ss_pred eEEEeeeeCCCCeEEEEeecC
Q 017646 331 FGIIRRFDEYSRKHSVLFEDG 351 (368)
Q Consensus 331 ~g~v~~~~~~~~~h~~~y~dg 351 (368)
.|+|+.||+.++-==|.-|||
T Consensus 3 ~G~Vk~fn~~kGfGFI~~~~g 23 (66)
T 1c9o_A 3 RGKVKWFNNEKGYGFIEVEGG 23 (66)
T ss_dssp EEEEEEEETTTTEEEEEETTE
T ss_pred ceEEEEEECCCCeEEEecCCC
Confidence 488999998888777777777
No 92
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=33.25 E-value=1.4e+02 Score=23.08 Aligned_cols=54 Identities=15% Similarity=0.085 Sum_probs=33.6
Q ss_pred cccCCCCCCCCCCCCcccccceEEEeeecCCceee-EEEeeeeCCC--CeEEEEeecCc
Q 017646 297 HIGSSRPPYNQRQICPQCCIGKVIRISHPKNESSF-GIIRRFDEYS--RKHSVLFEDGE 352 (368)
Q Consensus 297 ~~g~~~p~~~~~~~~~~~~vg~~~~~~~~~d~~~~-g~v~~~~~~~--~~h~~~y~dg~ 352 (368)
|.++.-|..........--||++|-|++ |..|| +.|.+-.... ...-|-|.+-.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~vG~kv~v~~--~~~~yeAeIl~ir~~~g~~~YYVHY~g~N 65 (94)
T 2rnz_A 9 HHSSGLVPRGSHMSVDDIIIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYN 65 (94)
T ss_dssp CSCCCSSCSSCSSCGGGCCTTEEEEEEC--SSCEEEEEEEEEECSSSSCEEEEECTTSC
T ss_pred ccccCCccCCCccccccccCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcC
Confidence 3334333333333444456999999996 78889 9887766533 35666666543
No 93
>1h95_A CSD, Y-box binding protein; translation factor, transcription factor, OB-fold, 5- stranded anti-parallel beta-barrel, single stranded DNA binding; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=32.37 E-value=49 Score=24.49 Aligned_cols=27 Identities=11% Similarity=0.199 Sum_probs=20.6
Q ss_pred eeeEEEeeeeCCCCeEEEEeecCceeE
Q 017646 329 SSFGIIRRFDEYSRKHSVLFEDGESEF 355 (368)
Q Consensus 329 ~~~g~v~~~~~~~~~h~~~y~dg~~e~ 355 (368)
+..|+|+.||..++-==|.-|||..++
T Consensus 8 ~~~G~Vkwfn~~kGfGFI~~~~gg~Dv 34 (79)
T 1h95_A 8 KVLGTVKWFNVRNGYGFINRNDTKEDV 34 (79)
T ss_dssp EEEEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred ccceEEEEEECCCCcEEEecCCCCccE
Confidence 444999999999888888888865543
No 94
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=32.34 E-value=50 Score=24.10 Aligned_cols=34 Identities=9% Similarity=0.072 Sum_probs=27.5
Q ss_pred CcccccceEEEeeecCCceeeEEEeeeeCCCCeE
Q 017646 311 CPQCCIGKVIRISHPKNESSFGIIRRFDEYSRKH 344 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h 344 (368)
+...++|++|.|-=-.+..|-|++.+||..-..+
T Consensus 9 ~L~~~~g~~V~VeLk~g~~~~G~L~~~D~~MNl~ 42 (75)
T 1d3b_A 9 VLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQ 42 (75)
T ss_dssp HHHHTTTSEEEEEETTSCEEEEEEEEECTTCCEE
T ss_pred HHHHhCCCEEEEEECCCcEEEEEEEEEccceeEE
Confidence 3456899999999887777669999999987743
No 95
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=32.28 E-value=45 Score=24.67 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=26.7
Q ss_pred cccceEEEeeecC--Cceee-EEEeeeeCCCC--eEEEEeec
Q 017646 314 CCIGKVIRISHPK--NESSF-GIIRRFDEYSR--KHSVLFED 350 (368)
Q Consensus 314 ~~vg~~~~~~~~~--d~~~~-g~v~~~~~~~~--~h~~~y~d 350 (368)
-.||++|.|+|+. +..+| +.|.+-+...+ +..|-|.+
T Consensus 6 ~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~g 47 (76)
T 2lcc_A 6 CLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYG 47 (76)
T ss_dssp SSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETT
T ss_pred cCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCC
Confidence 3599999999993 36788 98877765444 45666653
No 96
>2lua_A Protein MALE-specific lethal-2; DNA binding protein, metal binding; NMR {Drosophila melanogaster}
Probab=31.76 E-value=30 Score=23.85 Aligned_cols=40 Identities=35% Similarity=0.834 Sum_probs=27.1
Q ss_pred CccccccCCCCCC--CCC-CCCCCccceeeeCCCCCCCCCCCCCc
Q 017646 65 GIFCSCTASPGSS--GVC-DRDCHCGMLLSSCSSGCKCGNSCLNK 106 (368)
Q Consensus 65 ~~~C~C~~~~~~~--~~C-~~~C~c~~~~~eC~~~C~C~~~C~Nr 106 (368)
...|.|......+ ..| +..|.|..-...|. .|.|- .|.|-
T Consensus 4 k~~CrCG~~~~~~~~~TC~~~RCpCY~~~~sC~-~C~C~-GCkNP 46 (52)
T 2lua_A 4 KPKCRCGISGSSNTLTTCRNSRCPCYKSYNSCA-GCHCV-GCKNP 46 (52)
T ss_dssp CCCCCBTTBSCCCSSSTTTSTTCHHHHTTCCCS-SCCCS-SCCCS
T ss_pred CcccccCcccCCCCceeEcCCccceecCCCccC-CCEec-CcCCC
Confidence 3458886543222 235 77899998888897 58886 48874
No 97
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=31.54 E-value=1.1e+02 Score=24.74 Aligned_cols=44 Identities=11% Similarity=0.100 Sum_probs=32.5
Q ss_pred CcccccceEEEeeecCCceeeEEEeeeeCCCCeE---EEEee-cCcee
Q 017646 311 CPQCCIGKVIRISHPKNESSFGIIRRFDEYSRKH---SVLFE-DGESE 354 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~~h---~~~y~-dg~~e 354 (368)
+...++|++|.|-=-.+..|-|++.+||.+-..| .+.|+ ||+..
T Consensus 9 ~L~~~~gk~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~e~~~~g~~~ 56 (126)
T 2y9a_D 9 VLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVA 56 (126)
T ss_dssp HHHSCSSCEEEEEESSCCEEEEEEEEECTTSCEEEEEEEEECTTSCCE
T ss_pred HHHHhCCCEEEEEECCCcEEEEEEEEEcCceEEEEeeEEEEcCCCcEe
Confidence 3457899999998887777669999999998844 44443 66533
No 98
>2k5n_A Putative cold-shock protein; GFT protein structure, PSI, nesgc, OB fold, cold shock structural genomics; NMR {Pectobacterium atrosepticum}
Probab=30.98 E-value=85 Score=22.93 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=21.3
Q ss_pred eEEEeeeeCCCCeEEEEeecCceeEEe
Q 017646 331 FGIIRRFDEYSRKHSVLFEDGESEFID 357 (368)
Q Consensus 331 ~g~v~~~~~~~~~h~~~y~dg~~e~~~ 357 (368)
.|+|+.||..++-==|.-+||....+-
T Consensus 4 ~G~Vkwfn~~KGfGFI~~~dg~~dFvH 30 (74)
T 2k5n_A 4 NGTITTWFKDKGFGFIKDENGDNRYFH 30 (74)
T ss_dssp EEEEEEEETTTTEEEEEESSSCEEEEE
T ss_pred ceEEEEEECCCCeEEEecCCCCceEEE
Confidence 499999999999888888888655443
No 99
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=30.10 E-value=79 Score=28.18 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=32.8
Q ss_pred cceEEEeeecCCceee-EEEeeeeC--CCCeEEEEeecCceeEEecc
Q 017646 316 IGKVIRISHPKNESSF-GIIRRFDE--YSRKHSVLFEDGESEFIDMA 359 (368)
Q Consensus 316 vg~~~~~~~~~d~~~~-g~v~~~~~--~~~~h~~~y~dg~~e~~~l~ 359 (368)
||.+|=.-| .++.|| |.|..=-+ ...+.+|.|+++..++++.+
T Consensus 11 Vg~~vlg~k-~~~~W~rg~v~~I~~~~~g~~YkVkF~~~g~~ivs~~ 56 (213)
T 3dlm_A 11 VSMRILGKK-RTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKSLLSGN 56 (213)
T ss_dssp TTCEEEEEC-TTSBEEEEEEEEEEEETTEEEEEEEESSSCEEEECGG
T ss_pred EccEEEEEe-cCCcEEEEEEEEEEECCCCeEEEEEEcCCCCEEeecc
Confidence 889999999 568899 97766322 45789999998777777643
No 100
>3cam_A Cold-shock domain family protein; cold shock protein, chain SWAP, STRU genomics, oxford protein production facility, OPPF, gene RE; 2.60A {Neisseria meningitidis MC58}
Probab=29.77 E-value=61 Score=23.14 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=19.1
Q ss_pred eEEEeeeeCCCCeEEEEeecCceeE
Q 017646 331 FGIIRRFDEYSRKHSVLFEDGESEF 355 (368)
Q Consensus 331 ~g~v~~~~~~~~~h~~~y~dg~~e~ 355 (368)
.|+|+.||..++-==|.-|||..++
T Consensus 3 ~G~Vk~fn~~kGfGFI~~~~gg~dv 27 (67)
T 3cam_A 3 TGIVKWFNDAKGFGFITPDEGGEDL 27 (67)
T ss_dssp EEEEEEEETTTTEEEEEETTSCCCE
T ss_pred CEEEEEEECCCCeEEEecCCCCccE
Confidence 4889999988888888888764443
No 101
>1igq_A Transcriptional repressor protein KORB; SH3 domain, dimerization domain; 1.70A {Escherichia coli} SCOP: b.34.1.3 PDB: 1igu_A
Probab=28.59 E-value=69 Score=22.91 Aligned_cols=26 Identities=19% Similarity=0.153 Sum_probs=19.3
Q ss_pred CCCeEEEEeec-CceeEEeccccceEe
Q 017646 340 YSRKHSVLFED-GESEFIDMAKVDWEL 365 (368)
Q Consensus 340 ~~~~h~~~y~d-g~~e~~~l~~e~~~~ 365 (368)
..+.-.|-|+| |.++.++|..-.-.-
T Consensus 32 ~~G~~wiKyED~G~e~E~d~~~v~l~a 58 (62)
T 1igq_A 32 AEGYAWLKYEDDGQEFEANLADVKLVA 58 (62)
T ss_dssp STTEEEEEETTTCCEEEEEGGGCEEEE
T ss_pred cCceEEEEEecCCcEEEEeccceEEEe
Confidence 45666899966 999999988755443
No 102
>3a0j_A Cold shock protein; OB-fold, cytoplasm, transcription, structural genomics, NPPSFA; 1.65A {Thermus thermophilus}
Probab=28.53 E-value=57 Score=23.68 Aligned_cols=21 Identities=14% Similarity=0.086 Sum_probs=17.4
Q ss_pred eEEEeeeeCCCCeEEEEeecC
Q 017646 331 FGIIRRFDEYSRKHSVLFEDG 351 (368)
Q Consensus 331 ~g~v~~~~~~~~~h~~~y~dg 351 (368)
.|+|+.||..++-==|.-|||
T Consensus 3 ~G~Vk~fn~~kGfGFI~~~~g 23 (73)
T 3a0j_A 3 KGRVKWFNAEKGYGFIEREGD 23 (73)
T ss_dssp EEEEEEEETTTTEEEEECTTS
T ss_pred CEEEEEEECCCCEEEEecCCC
Confidence 488999998888877877887
No 103
>3i2z_B RNA chaperone, negative regulator of CSPA transcription; beta barrel, DNA binding protein/transcription, cytoplasm, gene regulation; 1.10A {Salmonella typhimurium} SCOP: b.40.4.5 PDB: 2l15_A 1mjc_A 3mef_A
Probab=27.81 E-value=59 Score=23.48 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=20.9
Q ss_pred eeEEEeeeeCCCCeEEEEeecCceeEE
Q 017646 330 SFGIIRRFDEYSRKHSVLFEDGESEFI 356 (368)
Q Consensus 330 ~~g~v~~~~~~~~~h~~~y~dg~~e~~ 356 (368)
..|+|+.||+.++-=-|.-+||..+++
T Consensus 6 ~~G~Vk~fn~~kGfGFI~~~~g~~dvF 32 (71)
T 3i2z_B 6 IKGNVKWFNESKGFGFITPEDGSKDVF 32 (71)
T ss_dssp EEEEEEEEETTTTEEEEEETTCCCCEE
T ss_pred ccEEEEEEECCCCcEEEecCCCCccEE
Confidence 349999999998888888888855543
No 104
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=27.69 E-value=52 Score=26.29 Aligned_cols=31 Identities=16% Similarity=0.297 Sum_probs=24.4
Q ss_pred cccc--ceEEEeeecCCceeeEEEeeeeCCCCe
Q 017646 313 QCCI--GKVIRISHPKNESSFGIIRRFDEYSRK 343 (368)
Q Consensus 313 ~~~v--g~~~~~~~~~d~~~~g~v~~~~~~~~~ 343 (368)
..++ |++|.||--.++.+-|++++||..-..
T Consensus 33 ~~~~~~~k~V~V~Lk~gr~~~G~L~~fD~~mNl 65 (118)
T 1b34_B 33 TQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNM 65 (118)
T ss_dssp HHHHHHTCEEEEEETTSCEEEEEEEEECTTCCE
T ss_pred HHHhcCCcEEEEEECCCcEEEEEEEEeCCceEE
Confidence 4557 599999987777655999999988764
No 105
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=27.34 E-value=46 Score=30.09 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=25.7
Q ss_pred CcccccceEEEeeecCCceeeEEEeeeeCCCC
Q 017646 311 CPQCCIGKVIRISHPKNESSFGIIRRFDEYSR 342 (368)
Q Consensus 311 ~~~~~vg~~~~~~~~~d~~~~g~v~~~~~~~~ 342 (368)
...++|+++|+|---.++.|.|++++||..-.
T Consensus 8 kL~klIdKrV~V~LkdGRel~GtLkgFDq~MN 39 (231)
T 3pgw_B 8 KMLQHIDYRMRCILQDGRIFIGTFKAFDKHMN 39 (231)
T ss_pred HHHHhcCCeEEEEECCCcEEEEEEEEEccccc
Confidence 34567999999998777666699999998764
No 106
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.25 E-value=1.1e+02 Score=23.26 Aligned_cols=40 Identities=13% Similarity=0.051 Sum_probs=30.2
Q ss_pred ccccceEEEeeec---CCceee-EEEeeeeCCC--CeEEEEeecCc
Q 017646 313 QCCIGKVIRISHP---KNESSF-GIIRRFDEYS--RKHSVLFEDGE 352 (368)
Q Consensus 313 ~~~vg~~~~~~~~---~d~~~~-g~v~~~~~~~--~~h~~~y~dg~ 352 (368)
.-.||++|.|+++ .+..|| +.|.+.+... ...-|-|.+=.
T Consensus 9 ~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~N 54 (87)
T 2eko_A 9 EIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFN 54 (87)
T ss_dssp SCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSC
T ss_pred cccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCC
Confidence 3459999999997 588899 9988877643 35777776654
No 107
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=27.12 E-value=73 Score=26.13 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=26.3
Q ss_pred cccceEEEeeecCCceee-EEEeeeeC----CCCeEEEEeec
Q 017646 314 CCIGKVIRISHPKNESSF-GIIRRFDE----YSRKHSVLFED 350 (368)
Q Consensus 314 ~~vg~~~~~~~~~d~~~~-g~v~~~~~----~~~~h~~~y~d 350 (368)
--||.+|-++|+ |..|| +.|..-.. ...+.-|-|.+
T Consensus 13 ~~vGe~v~~~~~-d~~~y~AkIl~i~~~~~~~~~~YyVHY~g 53 (133)
T 1wgs_A 13 VEIGETYLCRRP-DSTWHSAEVIQSRVNDQEGREEFYVHYVG 53 (133)
T ss_dssp CCTTSEEEEEET-TTEEEEEEEEEEEEETTTTEEEEEEECTT
T ss_pred cCCCCEEEEEeC-CCCEEEEEEEEEEeccCCCceEEEEeccC
Confidence 359999999998 77889 98776553 33456677763
No 108
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=26.62 E-value=1.6e+02 Score=22.44 Aligned_cols=37 Identities=14% Similarity=0.058 Sum_probs=27.4
Q ss_pred cccceEEEeeecCCceee-EEEeeeeCCC--CeEEEEeecCc
Q 017646 314 CCIGKVIRISHPKNESSF-GIIRRFDEYS--RKHSVLFEDGE 352 (368)
Q Consensus 314 ~~vg~~~~~~~~~d~~~~-g~v~~~~~~~--~~h~~~y~dg~ 352 (368)
--||++|-|++ |..|| +.|.+-.... ...-|-|.+=.
T Consensus 24 ~~vG~kv~v~~--~~~~y~AkIl~ir~~~~~~~YyVHY~g~N 63 (92)
T 2ro0_A 24 IIIKCQCWVQK--NDEERLAEILSINTRKAPPKFYVHYVNYN 63 (92)
T ss_dssp CCTTCEEEEEE--TTEEEEEEEEEEECSSSSCEEEEEETTSC
T ss_pred ccCCCEEEEEE--CCEEEEEEEEEEEEcCCCcEEEEEeCCcC
Confidence 46999999997 78899 9888766543 45667776543
No 109
>2yrv_A AT-rich interactive domain-containing protein 4A; ARID domain-containing protein 4A, retinoblastoma-binding protein 1, RBBP-1, structural genomics; NMR {Homo sapiens}
Probab=26.51 E-value=69 Score=25.83 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=23.8
Q ss_pred CCCCCCcccccceEEEeeecCCc-eee-EEEeeee
Q 017646 306 NQRQICPQCCIGKVIRISHPKNE-SSF-GIIRRFD 338 (368)
Q Consensus 306 ~~~~~~~~~~vg~~~~~~~~~d~-~~~-g~v~~~~ 338 (368)
|..+...+++||+.|-|.--..+ .|| |+|.+=+
T Consensus 3 ~~~~~l~de~lGkVV~V~~~~kk~~WfPALVVsPs 37 (117)
T 2yrv_A 3 SGSSGLNDELLGKVVSVVSATERTEWYPALVISPS 37 (117)
T ss_dssp CCCCCCCCSSTTSEEEEECSSCSSCEEEEEEECCS
T ss_pred cccccCCHHHcCcEEEEecCCCCCceeeeEEECCC
Confidence 34456688999999999864333 399 9986543
No 110
>2kcm_A Cold shock domain family protein; nucleic acid binding protein, beta barrel, structural genomi 2, protein structure initiative; NMR {Shewanella oneidensis}
Probab=26.40 E-value=57 Score=23.92 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=16.9
Q ss_pred EEEeeeeCCCCeEEEEeecC
Q 017646 332 GIIRRFDEYSRKHSVLFEDG 351 (368)
Q Consensus 332 g~v~~~~~~~~~h~~~y~dg 351 (368)
|+|+.||..++-==|.-+||
T Consensus 3 G~Vkwfn~~KGfGFI~~~dG 22 (74)
T 2kcm_A 3 GKVVSYLAAKKYGFIQGDDG 22 (74)
T ss_dssp EEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEECCCCEEEEecCCC
Confidence 88888988888877887888
No 111
>2yty_A Cold shock domain-containing protein E1; cell-free protein synthesis, beta-barrel, translational REGU RNA chaperone, RNA/DNA binding, QB fold; NMR {Homo sapiens}
Probab=26.01 E-value=62 Score=24.53 Aligned_cols=33 Identities=6% Similarity=0.062 Sum_probs=16.6
Q ss_pred EEEeeecC--CceeeEEEeeeeCCCCeEEEEeecCce
Q 017646 319 VIRISHPK--NESSFGIIRRFDEYSRKHSVLFEDGES 353 (368)
Q Consensus 319 ~~~~~~~~--d~~~~g~v~~~~~~~~~h~~~y~dg~~ 353 (368)
.|+++.+. ..+..|+|+.|| ++-==|.-|||..
T Consensus 6 ~i~l~~~~~~~~~~~G~Vk~f~--kGfGFI~~ddgg~ 40 (88)
T 2yty_A 6 SGRLLGRNSNSKRLLGYVATLK--DNFGFIETANHDK 40 (88)
T ss_dssp CCSCCCCCSSCCCEEEEEEEEC--SSEEEEECSSSSC
T ss_pred eEEEEeccCCCCceeEEEEEEE--CCccEEecCCCCc
Confidence 34444443 233347777776 3444455566533
No 112
>3aqq_A Calcium-regulated heat stable protein 1; compact beta-barrel, cold shock domain, ssDNA binding, DNA B protein; 2.80A {Homo sapiens}
Probab=25.31 E-value=73 Score=26.70 Aligned_cols=30 Identities=13% Similarity=0.159 Sum_probs=22.1
Q ss_pred cCCceeeEEEeeeeCCCCeEEEEeecCcee
Q 017646 325 PKNESSFGIIRRFDEYSRKHSVLFEDGESE 354 (368)
Q Consensus 325 ~~d~~~~g~v~~~~~~~~~h~~~y~dg~~e 354 (368)
+...|..|+|+.||..++-==|.-|||..+
T Consensus 58 ~~g~m~~GtVKwFn~~KGfGFI~~ddGg~D 87 (147)
T 3aqq_A 58 SQGPVYKGVCKCFCRSKGHGFITPADGGPD 87 (147)
T ss_dssp HHSCCEEEEEEEEETTTTEEEEEESSSCSC
T ss_pred ccCCccceEEEEEeCCCCeEEeccCCCCcc
Confidence 344454599999999988888888887443
No 113
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=25.18 E-value=29 Score=27.40 Aligned_cols=20 Identities=30% Similarity=0.589 Sum_probs=16.7
Q ss_pred EEEEEEccCCCCCCeEEEecC
Q 017646 211 RIGIFATRDIKKGENLTYDYQ 231 (368)
Q Consensus 211 ri~i~A~RdI~~GEELT~dY~ 231 (368)
-.++||.++|++||-|. .|.
T Consensus 15 G~GvfA~~~I~~G~~I~-ey~ 34 (119)
T 1n3j_A 15 GYGVFARKSFEKGELVE-ECL 34 (119)
T ss_dssp CCEEEECCCBCSCEEEC-CCC
T ss_pred eeEEEECCcCCCCCEEE-Eee
Confidence 47899999999999986 454
No 114
>1g6p_A Cold shock protein TMCSP; greek-KEY, beta barrel, OB-fold, structural genomics; NMR {Thermotoga maritima} SCOP: b.40.4.5
Probab=25.07 E-value=48 Score=23.58 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=15.9
Q ss_pred EEEeeeeCCCCeEEEEeecC
Q 017646 332 GIIRRFDEYSRKHSVLFEDG 351 (368)
Q Consensus 332 g~v~~~~~~~~~h~~~y~dg 351 (368)
|+|+.||+.++-=-|.-+||
T Consensus 3 G~Vk~fn~~kGfGFI~~~~g 22 (66)
T 1g6p_A 3 GKVKWFDSKKGYGFITKDEG 22 (66)
T ss_dssp EEEEEEETTTTEEEEEETTS
T ss_pred EEEEEEECCCCEEEEecCCC
Confidence 88888888888777777776
No 115
>3k3s_A Altronate hydrolase; structural genomics, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 2.15A {Shigella flexneri 2a str}
Probab=22.95 E-value=47 Score=26.35 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=0.0
Q ss_pred EEEEccCCCCCCeEEEe
Q 017646 213 GIFATRDIKKGENLTYD 229 (368)
Q Consensus 213 ~i~A~RdI~~GEELT~d 229 (368)
+.+|+++|++||+|+++
T Consensus 33 VaVAl~~L~aG~~v~~~ 49 (105)
T 3k3s_A 33 VAVALADLAEGTEVSVD 49 (105)
T ss_dssp EEEESSCBCTTCEEEET
T ss_pred EEEecCccCCCCEEeeC
No 116
>1rju_V Metallothionein; Cu(I)-thiolate, metal binding protein; 1.44A {Synthetic} SCOP: g.46.1.1 PDB: 1aoo_A 1aqq_A 1aqr_A 1fmy_A
Probab=22.40 E-value=47 Score=20.37 Aligned_cols=6 Identities=33% Similarity=1.492 Sum_probs=2.3
Q ss_pred CCCCCC
Q 017646 80 CDRDCH 85 (368)
Q Consensus 80 C~~~C~ 85 (368)
|...|.
T Consensus 16 cqkscs 21 (36)
T 1rju_V 16 CQKSCS 21 (36)
T ss_dssp GTTSCC
T ss_pred HhhcCC
Confidence 333333
No 117
>2bh8_A 1B11; transcription, molecular evolution, unique architecture, transcription regulation, phosphorylation; 1.9A {Escherichia coli}
Probab=22.07 E-value=78 Score=24.37 Aligned_cols=27 Identities=19% Similarity=0.303 Sum_probs=21.2
Q ss_pred eeeEEEeeeeCCCCeEEEEeecCceeE
Q 017646 329 SSFGIIRRFDEYSRKHSVLFEDGESEF 355 (368)
Q Consensus 329 ~~~g~v~~~~~~~~~h~~~y~dg~~e~ 355 (368)
+.-|+|+.||..++-=-|.-+||..+.
T Consensus 16 ~~~G~Vk~fn~~kGfGFI~~~~gg~dv 42 (101)
T 2bh8_A 16 KMTGIVKWFNADKGFGFITPDDGSKDV 42 (101)
T ss_dssp CEEEEEEEEEGGGTEEEEEESSSSCEE
T ss_pred cceeEEEEEECCCCCEEEEeCCCCcEE
Confidence 434999999999998888878875544
No 118
>2r41_A Uncharacterized protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics; 2.90A {Enterococcus faecalis}
Probab=21.24 E-value=69 Score=25.58 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=26.3
Q ss_pred EEeeeeCCCCeEEEEeecCceeEEeccccc
Q 017646 333 IIRRFDEYSRKHSVLFEDGESEFIDMAKVD 362 (368)
Q Consensus 333 ~v~~~~~~~~~h~~~y~dg~~e~~~l~~e~ 362 (368)
....||+.--+...++|||+.|.+-|..|=
T Consensus 78 ~~y~fd~~~p~~V~viD~~~~eTilLp~E~ 107 (110)
T 2r41_A 78 LPFSYSTAYPSRIFAFDDGHRETILLPAEM 107 (110)
T ss_dssp EEEECCTTSCSEEEEEECSSCEEEECGGGC
T ss_pred cccccCCCCCCEEEEEeCCCcEEEEcchhh
Confidence 467788888889999999999999999884
Done!