Query 017649
Match_columns 368
No_of_seqs 233 out of 2258
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 17:51:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017649.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017649hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3n71_A Histone lysine methyltr 100.0 5.3E-59 1.8E-63 465.5 31.6 325 2-360 108-449 (490)
2 3qww_A SET and MYND domain-con 100.0 5.3E-59 1.8E-63 458.8 29.8 321 2-354 110-432 (433)
3 3qwp_A SET and MYND domain-con 100.0 5.5E-58 1.9E-62 451.9 25.7 316 2-361 107-428 (429)
4 3rq4_A Histone-lysine N-methyl 99.6 1.7E-16 5.7E-21 143.0 3.4 82 73-165 154-237 (247)
5 3s8p_A Histone-lysine N-methyl 99.5 5.3E-15 1.8E-19 134.6 4.6 85 70-164 180-265 (273)
6 3n71_A Histone lysine methyltr 99.4 1E-12 3.5E-17 131.0 13.2 113 220-332 351-463 (490)
7 1n3j_A A612L, histone H3 lysin 99.3 3.9E-13 1.3E-17 108.4 3.9 54 88-141 57-112 (119)
8 3edt_B KLC 2, kinesin light ch 99.3 6.3E-11 2.2E-15 106.4 17.3 139 221-359 44-182 (283)
9 2w5y_A Histone-lysine N-methyl 99.2 1.1E-11 3.6E-16 108.0 5.2 55 95-158 124-182 (192)
10 3edt_B KLC 2, kinesin light ch 99.2 1.5E-10 5E-15 104.0 13.0 128 230-357 11-138 (283)
11 3nf1_A KLC 1, kinesin light ch 99.2 1.1E-09 3.9E-14 99.8 17.1 137 223-359 72-208 (311)
12 3qwp_A SET and MYND domain-con 99.1 2.3E-10 7.9E-15 112.2 11.8 97 221-317 330-426 (429)
13 3qww_A SET and MYND domain-con 99.1 2.3E-10 8E-15 112.2 11.7 92 220-311 340-431 (433)
14 3nf1_A KLC 1, kinesin light ch 99.1 1.3E-09 4.4E-14 99.5 16.0 136 222-357 29-164 (311)
15 3f9x_A Histone-lysine N-methyl 99.1 4.2E-11 1.4E-15 102.1 3.0 54 96-149 108-165 (166)
16 3ope_A Probable histone-lysine 99.0 1.3E-10 4.6E-15 103.6 4.4 59 92-159 142-205 (222)
17 3ooi_A Histone-lysine N-methyl 99.0 2.5E-10 8.4E-15 102.6 5.0 62 88-159 157-223 (232)
18 4gcn_A Protein STI-1; structur 99.0 1.7E-08 5.8E-13 81.4 14.4 104 221-333 9-112 (127)
19 2xev_A YBGF; tetratricopeptide 98.9 2.9E-08 9.9E-13 78.8 14.3 122 223-359 5-126 (129)
20 3h6l_A Histone-lysine N-methyl 98.9 5.7E-10 1.9E-14 102.6 4.5 54 96-159 191-248 (278)
21 3smt_A Histone-lysine N-methyl 98.9 1E-09 3.5E-14 109.2 6.2 93 60-158 237-330 (497)
22 4gco_A Protein STI-1; structur 98.9 5.5E-08 1.9E-12 78.3 14.4 105 221-346 14-118 (126)
23 3rkv_A Putative peptidylprolyl 98.9 8.9E-08 3E-12 79.8 15.6 108 218-333 9-126 (162)
24 3hna_A Histone-lysine N-methyl 98.8 9.4E-10 3.2E-14 101.7 2.4 64 88-159 208-280 (287)
25 1ml9_A Histone H3 methyltransf 98.8 2E-09 7E-14 100.4 4.6 63 96-158 221-292 (302)
26 3qxy_A N-lysine methyltransfer 98.8 5.2E-09 1.8E-13 103.0 7.1 91 61-157 184-278 (449)
27 3upv_A Heat shock protein STI1 98.8 1.7E-07 5.8E-12 74.4 14.2 120 221-358 5-124 (126)
28 2f69_A Histone-lysine N-methyl 98.8 3.1E-09 1.1E-13 96.8 4.3 45 96-140 187-236 (261)
29 1mvh_A Cryptic LOCI regulator 98.8 4.9E-09 1.7E-13 97.5 5.1 44 96-139 214-265 (299)
30 3gyz_A Chaperone protein IPGC; 98.8 1.5E-07 5.2E-12 78.5 13.6 111 221-352 37-147 (151)
31 2hr2_A Hypothetical protein; a 98.7 1.8E-07 6.3E-12 78.6 13.9 115 219-334 10-132 (159)
32 3sz7_A HSC70 cochaperone (SGT) 98.7 5.5E-07 1.9E-11 75.0 16.3 98 221-334 12-109 (164)
33 3ro3_A PINS homolog, G-protein 98.7 5.3E-07 1.8E-11 73.1 15.6 131 221-357 10-140 (164)
34 2xcb_A PCRH, regulatory protei 98.7 4.6E-07 1.6E-11 73.9 15.0 120 221-361 19-138 (142)
35 2qpw_A PR domain zinc finger p 98.7 1.3E-08 4.6E-13 84.7 5.1 45 96-140 100-147 (149)
36 2r3a_A Histone-lysine N-methyl 98.7 1.5E-08 5E-13 94.2 5.9 44 95-138 215-266 (300)
37 2vgx_A Chaperone SYCD; alterna 98.7 5.2E-07 1.8E-11 74.6 14.8 117 220-357 21-137 (148)
38 3bo5_A Histone-lysine N-methyl 98.7 1.4E-08 4.7E-13 94.0 5.4 49 92-140 201-255 (290)
39 1h3i_A Histone H3 lysine 4 spe 98.7 9.4E-09 3.2E-13 95.6 4.3 43 96-138 241-288 (293)
40 3ulq_A Response regulator aspa 98.6 5.8E-07 2E-11 85.5 15.9 126 226-356 109-234 (383)
41 3ulq_A Response regulator aspa 98.6 7.8E-07 2.7E-11 84.6 16.6 131 221-356 144-274 (383)
42 1elr_A TPR2A-domain of HOP; HO 98.6 1.9E-06 6.7E-11 67.3 16.2 104 221-333 5-108 (131)
43 2fbn_A 70 kDa peptidylprolyl i 98.6 1.7E-06 5.8E-11 74.4 16.5 119 216-349 34-162 (198)
44 3ro3_A PINS homolog, G-protein 98.6 1E-06 3.4E-11 71.4 13.8 111 222-336 51-161 (164)
45 3gw4_A Uncharacterized protein 98.6 1.8E-06 6.1E-11 73.6 15.8 113 222-337 28-140 (203)
46 3u3w_A Transcriptional activat 98.6 1.8E-06 6E-11 79.2 16.3 130 226-360 121-250 (293)
47 2dba_A Smooth muscle cell asso 98.6 1.3E-06 4.4E-11 70.3 13.6 112 222-351 30-141 (148)
48 3q15_A PSP28, response regulat 98.5 1.9E-06 6.4E-11 81.9 16.3 130 221-356 142-271 (378)
49 3q49_B STIP1 homology and U bo 98.5 3.5E-06 1.2E-10 67.2 15.6 99 222-336 11-109 (137)
50 2qfc_A PLCR protein; TPR, HTH, 98.5 1.2E-06 4.2E-11 80.3 14.4 114 221-337 156-270 (293)
51 3u3w_A Transcriptional activat 98.5 1E-06 3.5E-11 80.9 13.8 113 222-337 157-270 (293)
52 1elw_A TPR1-domain of HOP; HOP 98.5 3.3E-06 1.1E-10 64.7 14.2 108 221-349 5-112 (118)
53 3qky_A Outer membrane assembly 98.5 1.6E-06 5.3E-11 77.9 14.1 114 221-349 16-137 (261)
54 3q15_A PSP28, response regulat 98.5 2.1E-06 7.2E-11 81.6 15.6 112 221-337 183-294 (378)
55 4g1t_A Interferon-induced prot 98.5 1.7E-06 6E-11 84.0 14.4 116 226-346 57-175 (472)
56 3gw4_A Uncharacterized protein 98.5 2.8E-06 9.4E-11 72.4 14.0 114 221-337 67-180 (203)
57 2qfc_A PLCR protein; TPR, HTH, 98.5 2.9E-06 9.9E-11 77.8 15.0 127 226-358 121-248 (293)
58 1ihg_A Cyclophilin 40; ppiase 98.5 4E-06 1.4E-10 80.2 16.4 126 213-351 216-349 (370)
59 4ga2_A E3 SUMO-protein ligase 98.5 1.7E-06 5.8E-11 71.5 11.9 108 224-352 35-143 (150)
60 4gyw_A UDP-N-acetylglucosamine 98.5 1.7E-06 5.7E-11 90.2 14.5 93 224-332 13-105 (723)
61 4a1s_A PINS, partner of inscut 98.4 4.8E-06 1.7E-10 79.1 16.5 132 219-359 47-179 (411)
62 1a17_A Serine/threonine protei 98.4 1.1E-05 3.6E-10 66.2 16.4 100 218-333 11-110 (166)
63 3qky_A Outer membrane assembly 98.4 2.7E-06 9.2E-11 76.3 13.5 126 223-363 92-249 (261)
64 1qqe_A Vesicular transport pro 98.4 6.5E-06 2.2E-10 75.6 16.2 106 227-336 44-150 (292)
65 2h21_A Ribulose-1,5 bisphospha 98.4 2E-07 7E-12 91.5 5.9 89 60-157 158-257 (440)
66 2vyi_A SGTA protein; chaperone 98.4 1.1E-05 3.6E-10 62.9 14.9 98 220-333 12-109 (131)
67 2lni_A Stress-induced-phosphop 98.4 5E-06 1.7E-10 65.3 13.1 96 222-333 18-113 (133)
68 3k9i_A BH0479 protein; putativ 98.4 9.5E-07 3.3E-11 69.4 8.5 100 233-350 3-102 (117)
69 3ro2_A PINS homolog, G-protein 98.4 9.7E-06 3.3E-10 73.7 16.2 128 222-358 7-135 (338)
70 3sf4_A G-protein-signaling mod 98.4 9E-06 3.1E-10 76.6 16.1 135 222-362 229-363 (406)
71 3urz_A Uncharacterized protein 98.4 1.2E-05 4E-10 70.0 15.4 106 221-347 5-126 (208)
72 1hxi_A PEX5, peroxisome target 98.4 2.4E-06 8.1E-11 68.0 9.9 94 224-333 21-114 (121)
73 1hz4_A MALT regulatory protein 98.3 1.5E-05 5.3E-10 74.9 17.1 113 223-337 56-168 (373)
74 2yhc_A BAMD, UPF0169 lipoprote 98.3 7.8E-06 2.7E-10 71.9 13.9 117 222-353 6-140 (225)
75 4g1t_A Interferon-induced prot 98.3 2.1E-06 7.1E-11 83.4 11.1 91 261-351 50-141 (472)
76 1p5q_A FKBP52, FK506-binding p 98.3 7.9E-06 2.7E-10 76.9 14.7 107 219-333 146-259 (336)
77 4a1s_A PINS, partner of inscut 98.3 8.6E-06 3E-10 77.4 15.1 130 222-357 225-354 (411)
78 3sf4_A G-protein-signaling mod 98.3 1.3E-05 4.5E-10 75.4 16.0 127 223-358 12-139 (406)
79 4eqf_A PEX5-related protein; a 98.3 5.7E-06 2E-10 77.5 13.4 107 223-345 216-322 (365)
80 1na0_A Designed protein CTPR3; 98.3 2.5E-05 8.7E-10 60.1 14.7 95 223-333 12-106 (125)
81 4gyw_A UDP-N-acetylglucosamine 98.3 6.3E-06 2.1E-10 85.8 14.1 104 221-345 44-147 (723)
82 2ifu_A Gamma-SNAP; membrane fu 98.3 1.4E-05 4.9E-10 73.8 14.7 111 222-337 78-188 (307)
83 3ro2_A PINS homolog, G-protein 98.3 2E-05 6.8E-10 71.6 15.2 131 222-358 185-315 (338)
84 2ifu_A Gamma-SNAP; membrane fu 98.3 1.1E-05 3.9E-10 74.5 13.6 122 228-356 44-165 (307)
85 1wao_1 Serine/threonine protei 98.3 3.1E-06 1.1E-10 83.8 10.3 104 225-349 11-114 (477)
86 2c2l_A CHIP, carboxy terminus 98.2 7.8E-06 2.7E-10 74.8 11.9 98 222-335 6-103 (281)
87 1qqe_A Vesicular transport pro 98.2 4E-05 1.4E-09 70.2 16.5 111 221-335 78-189 (292)
88 3vtx_A MAMA; tetratricopeptide 98.2 1.5E-05 5E-10 67.1 12.2 92 226-333 79-170 (184)
89 1kt0_A FKBP51, 51 kDa FK506-bi 98.2 1.9E-05 6.6E-10 77.5 14.7 108 218-333 266-380 (457)
90 3ieg_A DNAJ homolog subfamily 98.2 4.2E-05 1.5E-09 70.3 15.8 113 222-352 236-349 (359)
91 2pl2_A Hypothetical conserved 98.2 2.1E-05 7E-10 68.9 12.5 97 222-334 41-148 (217)
92 2kck_A TPR repeat; tetratricop 98.1 1.6E-05 5.3E-10 60.3 10.1 94 226-333 12-106 (112)
93 1hz4_A MALT regulatory protein 98.1 7.9E-05 2.7E-09 70.0 17.1 126 224-355 18-144 (373)
94 1fch_A Peroxisomal targeting s 98.1 3.5E-05 1.2E-09 71.7 14.4 122 223-360 220-344 (368)
95 4ga2_A E3 SUMO-protein ligase 98.1 6.1E-06 2.1E-10 68.0 7.8 94 230-344 7-100 (150)
96 4i17_A Hypothetical protein; T 98.1 7.2E-05 2.5E-09 65.2 15.0 98 223-333 45-146 (228)
97 2e2e_A Formate-dependent nitri 98.1 7.3E-05 2.5E-09 62.4 14.3 115 222-357 46-163 (177)
98 3uq3_A Heat shock protein STI1 98.1 4.2E-05 1.4E-09 67.1 13.3 105 220-334 5-109 (258)
99 3uq3_A Heat shock protein STI1 98.1 5.3E-05 1.8E-09 66.4 13.8 115 222-354 141-255 (258)
100 2if4_A ATFKBP42; FKBP-like, al 98.1 1.6E-05 5.6E-10 74.8 10.9 119 216-352 175-307 (338)
101 2pl2_A Hypothetical conserved 98.1 3E-05 1E-09 67.8 11.8 102 223-345 8-120 (217)
102 2yhc_A BAMD, UPF0169 lipoprote 98.1 9E-05 3.1E-09 64.9 14.9 123 222-359 43-197 (225)
103 1hh8_A P67PHOX, NCF-2, neutrop 98.1 2.9E-05 9.9E-10 66.7 11.3 105 222-334 39-151 (213)
104 2vq2_A PILW, putative fimbrial 98.0 0.00013 4.5E-09 62.4 14.9 94 226-333 48-142 (225)
105 1fch_A Peroxisomal targeting s 98.0 1.6E-05 5.5E-10 74.1 9.7 112 222-341 253-367 (368)
106 4gcn_A Protein STI-1; structur 98.0 2.8E-05 9.5E-10 62.1 9.7 86 260-354 6-91 (127)
107 4i17_A Hypothetical protein; T 98.0 4.2E-05 1.4E-09 66.7 11.6 98 222-334 9-106 (228)
108 2ho1_A Type 4 fimbrial biogene 98.0 8.2E-05 2.8E-09 65.4 13.5 62 265-332 108-169 (252)
109 2kat_A Uncharacterized protein 98.0 5.5E-05 1.9E-09 58.6 10.7 103 238-358 3-105 (115)
110 4eqf_A PEX5-related protein; a 98.0 1.7E-05 5.9E-10 74.2 9.2 113 222-342 249-365 (365)
111 2ho1_A Type 4 fimbrial biogene 98.0 0.00014 4.7E-09 64.0 14.5 93 226-332 111-203 (252)
112 1xnf_A Lipoprotein NLPI; TPR, 98.0 6.1E-05 2.1E-09 66.9 12.3 97 221-333 44-140 (275)
113 2fo7_A Synthetic consensus TPR 97.9 0.00012 4E-09 56.8 11.9 93 225-333 6-98 (136)
114 3hym_B Cell division cycle pro 97.9 0.0001 3.5E-09 67.0 13.3 102 224-333 163-265 (330)
115 2vq2_A PILW, putative fimbrial 97.9 0.00021 7.1E-09 61.1 14.5 94 226-333 82-176 (225)
116 1hh8_A P67PHOX, NCF-2, neutrop 97.9 6.7E-05 2.3E-09 64.3 11.2 95 221-334 7-101 (213)
117 3u4t_A TPR repeat-containing p 97.9 6.1E-05 2.1E-09 67.0 11.2 98 223-333 6-103 (272)
118 3as5_A MAMA; tetratricopeptide 97.9 0.00024 8.2E-09 58.5 14.0 94 224-333 46-139 (186)
119 3ieg_A DNAJ homolog subfamily 97.9 0.00016 5.5E-09 66.4 14.0 98 220-333 3-100 (359)
120 2y4t_A DNAJ homolog subfamily 97.9 0.00025 8.6E-09 67.9 15.9 111 224-352 261-372 (450)
121 2fo7_A Synthetic consensus TPR 97.9 0.00015 5.3E-09 56.1 11.9 94 224-333 39-132 (136)
122 4abn_A Tetratricopeptide repea 97.9 0.00015 5E-09 71.5 13.6 105 223-345 173-294 (474)
123 3hym_B Cell division cycle pro 97.9 9.2E-05 3.1E-09 67.4 11.4 113 222-347 195-308 (330)
124 3urz_A Uncharacterized protein 97.9 0.00026 8.8E-09 61.3 13.7 115 226-359 60-206 (208)
125 3mkr_A Coatomer subunit epsilo 97.9 0.00018 6.3E-09 66.0 13.3 103 232-355 178-281 (291)
126 3db5_A PR domain zinc finger p 97.9 1.3E-05 4.5E-10 66.7 4.9 46 95-140 97-145 (151)
127 4gco_A Protein STI-1; structur 97.8 9.5E-05 3.3E-09 58.9 9.8 68 258-333 9-76 (126)
128 1w3b_A UDP-N-acetylglucosamine 97.8 0.00016 5.4E-09 68.2 12.8 91 226-332 277-367 (388)
129 3cv0_A Peroxisome targeting si 97.8 0.00036 1.2E-08 63.3 14.8 99 223-337 175-273 (327)
130 2vsy_A XCC0866; transferase, g 97.8 0.00015 5.1E-09 72.8 13.2 96 222-333 25-120 (568)
131 3as5_A MAMA; tetratricopeptide 97.8 0.00019 6.6E-09 59.1 11.5 96 223-334 79-174 (186)
132 2q7f_A YRRB protein; TPR, prot 97.8 0.00015 5.1E-09 63.0 11.3 89 228-332 133-221 (243)
133 3ma5_A Tetratricopeptide repea 97.8 5.6E-05 1.9E-09 57.5 7.5 68 261-336 6-73 (100)
134 3qou_A Protein YBBN; thioredox 97.8 0.00022 7.4E-09 65.2 12.4 104 221-333 118-248 (287)
135 2q7f_A YRRB protein; TPR, prot 97.8 0.00043 1.5E-08 60.0 13.8 94 224-333 95-188 (243)
136 3cv0_A Peroxisome targeting si 97.8 0.0001 3.4E-09 67.0 9.9 113 222-342 208-324 (327)
137 3vtx_A MAMA; tetratricopeptide 97.8 0.00065 2.2E-08 56.8 14.1 100 225-333 10-136 (184)
138 1zu2_A Mitochondrial import re 97.8 0.00013 4.5E-09 60.9 9.4 97 235-352 17-134 (158)
139 2r5s_A Uncharacterized protein 97.7 0.00011 3.7E-09 61.7 9.0 103 223-333 9-137 (176)
140 4abn_A Tetratricopeptide repea 97.7 0.0002 6.7E-09 70.5 12.0 95 222-333 104-208 (474)
141 1na3_A Designed protein CTPR2; 97.7 0.0003 1E-08 51.2 10.3 65 261-333 8-72 (91)
142 3u4t_A TPR repeat-containing p 97.7 0.0001 3.5E-09 65.5 9.0 96 225-333 42-137 (272)
143 3ep0_A PR domain zinc finger p 97.7 2.9E-05 9.8E-10 65.8 4.9 44 96-139 102-148 (170)
144 2l6j_A TPR repeat-containing p 97.7 2.2E-05 7.6E-10 59.8 4.0 96 221-328 5-102 (111)
145 4b4t_Q 26S proteasome regulato 97.7 0.00042 1.4E-08 66.1 13.9 128 221-354 56-183 (434)
146 1xnf_A Lipoprotein NLPI; TPR, 97.7 0.00012 4.2E-09 64.8 9.3 91 231-333 16-106 (275)
147 2gw1_A Mitochondrial precursor 97.7 0.00028 9.7E-09 68.5 12.4 99 219-334 5-103 (514)
148 4b4t_Q 26S proteasome regulato 97.7 0.0012 4.2E-08 62.8 16.8 118 223-343 138-255 (434)
149 1w3b_A UDP-N-acetylglucosamine 97.7 0.00029 9.8E-09 66.4 11.9 60 265-332 138-197 (388)
150 1wao_1 Serine/threonine protei 97.6 3.6E-05 1.2E-09 76.1 5.1 108 221-344 41-161 (477)
151 2y4t_A DNAJ homolog subfamily 97.6 0.00041 1.4E-08 66.4 12.2 98 220-333 26-123 (450)
152 2xpi_A Anaphase-promoting comp 97.6 0.00063 2.2E-08 67.7 14.0 111 223-348 478-589 (597)
153 2h6f_A Protein farnesyltransfe 97.6 0.00033 1.1E-08 67.1 11.1 53 230-290 107-160 (382)
154 2l6j_A TPR repeat-containing p 97.6 0.00057 1.9E-08 51.7 10.3 86 262-360 4-92 (111)
155 2xev_A YBGF; tetratricopeptide 97.6 0.00033 1.1E-08 54.7 9.1 83 265-357 5-87 (129)
156 1a17_A Serine/threonine protei 97.6 0.00091 3.1E-08 54.2 11.9 100 222-335 49-148 (166)
157 2xpi_A Anaphase-promoting comp 97.6 0.0011 3.8E-08 65.9 14.6 78 263-347 476-554 (597)
158 2h6f_A Protein farnesyltransfe 97.5 0.00025 8.6E-09 68.0 8.6 95 223-333 134-229 (382)
159 3gyz_A Chaperone protein IPGC; 97.5 0.00032 1.1E-08 58.0 8.0 75 258-345 32-106 (151)
160 2vsy_A XCC0866; transferase, g 97.5 0.0008 2.7E-08 67.4 12.3 98 222-335 59-159 (568)
161 2gw1_A Mitochondrial precursor 97.4 0.0021 7E-08 62.3 14.6 116 223-353 375-493 (514)
162 2vgx_A Chaperone SYCD; alterna 97.4 0.00036 1.2E-08 57.1 7.4 75 258-345 17-91 (148)
163 2e2e_A Formate-dependent nitri 97.4 0.00055 1.9E-08 57.0 8.7 88 230-333 20-110 (177)
164 3upv_A Heat shock protein STI1 97.4 0.001 3.6E-08 51.9 9.9 64 262-333 4-67 (126)
165 3rkv_A Putative peptidylprolyl 97.4 0.00087 3E-08 55.1 9.8 74 260-333 9-92 (162)
166 3dal_A PR domain zinc finger p 97.4 0.00012 4.1E-09 63.2 4.5 43 96-138 132-177 (196)
167 3mkr_A Coatomer subunit epsilo 97.4 0.0016 5.4E-08 59.6 12.4 104 223-345 133-236 (291)
168 3fp2_A TPR repeat-containing p 97.4 0.00079 2.7E-08 65.9 10.8 96 219-331 24-119 (537)
169 1na3_A Designed protein CTPR2; 97.4 0.0017 5.9E-08 47.0 10.2 81 222-318 11-91 (91)
170 1p5q_A FKBP52, FK506-binding p 97.4 0.001 3.4E-08 62.3 10.8 100 221-336 197-297 (336)
171 1elr_A TPR2A-domain of HOP; HO 97.4 0.0014 4.8E-08 50.5 10.1 86 262-356 4-89 (131)
172 3sz7_A HSC70 cochaperone (SGT) 97.3 0.0014 4.7E-08 54.0 10.2 68 258-333 7-74 (164)
173 3fp2_A TPR repeat-containing p 97.3 0.0024 8.2E-08 62.4 13.3 94 224-333 280-373 (537)
174 1ouv_A Conserved hypothetical 97.3 0.0021 7.3E-08 57.3 11.4 80 233-332 55-142 (273)
175 2pzi_A Probable serine/threoni 97.3 0.00089 3E-08 69.0 10.0 94 222-332 435-528 (681)
176 2lni_A Stress-induced-phosphop 97.2 0.0017 5.8E-08 50.3 9.4 71 255-333 9-79 (133)
177 2dba_A Smooth muscle cell asso 97.2 0.0025 8.5E-08 50.5 10.6 70 259-333 25-94 (148)
178 2xcb_A PCRH, regulatory protei 97.2 0.0021 7.2E-08 51.6 9.9 75 258-345 14-88 (142)
179 2hr2_A Hypothetical protein; a 97.2 0.003 1E-07 52.7 10.5 73 262-335 11-88 (159)
180 2pzi_A Probable serine/threoni 97.2 0.00072 2.4E-08 69.7 8.2 95 231-333 402-496 (681)
181 3ihx_A PR domain zinc finger p 97.1 0.00027 9.3E-09 58.6 3.6 43 96-138 97-142 (152)
182 3q49_B STIP1 homology and U bo 97.1 0.0028 9.7E-08 49.7 9.6 66 260-333 7-72 (137)
183 2v5f_A Prolyl 4-hydroxylase su 97.1 0.0051 1.7E-07 47.0 10.6 76 265-346 8-83 (104)
184 2kc7_A BFR218_protein; tetratr 97.1 0.0013 4.4E-08 48.9 7.0 67 267-345 5-71 (99)
185 4f3v_A ESX-1 secretion system 97.0 0.0031 1.1E-07 57.8 9.9 90 226-331 108-198 (282)
186 4f3v_A ESX-1 secretion system 97.0 0.0069 2.3E-07 55.4 12.2 97 224-333 139-237 (282)
187 1ouv_A Conserved hypothetical 97.0 0.0054 1.8E-07 54.6 11.3 89 225-333 79-179 (273)
188 2vyi_A SGTA protein; chaperone 97.0 0.0051 1.7E-07 47.1 9.7 67 259-333 9-75 (131)
189 2kc7_A BFR218_protein; tetratr 96.9 0.0031 1E-07 46.8 7.9 59 225-291 5-64 (99)
190 3ray_A PR domain-containing pr 96.9 0.00068 2.3E-08 60.0 4.5 57 96-162 141-200 (237)
191 2kck_A TPR repeat; tetratricop 96.9 0.0016 5.4E-08 48.7 6.0 61 265-333 9-69 (112)
192 1elw_A TPR1-domain of HOP; HOP 96.9 0.007 2.4E-07 45.4 9.7 64 262-333 4-67 (118)
193 1na0_A Designed protein CTPR3; 96.9 0.0066 2.3E-07 46.0 9.6 64 262-333 9-72 (125)
194 1hxi_A PEX5, peroxisome target 96.9 0.0074 2.5E-07 47.2 9.9 68 265-345 20-87 (121)
195 3k9i_A BH0479 protein; putativ 96.8 0.0021 7E-08 49.8 6.0 62 274-345 2-63 (117)
196 3qou_A Protein YBBN; thioredox 96.8 0.0053 1.8E-07 55.8 9.5 69 260-334 217-285 (287)
197 3ma5_A Tetratricopeptide repea 96.7 0.0076 2.6E-07 45.3 8.5 63 223-293 10-72 (100)
198 2fbn_A 70 kDa peptidylprolyl i 96.6 0.0063 2.2E-07 51.5 8.5 88 221-324 89-176 (198)
199 2c2l_A CHIP, carboxy terminus 96.6 0.0052 1.8E-07 55.7 8.2 64 262-333 4-67 (281)
200 2r5s_A Uncharacterized protein 96.6 0.0078 2.7E-07 50.0 8.6 67 262-334 108-174 (176)
201 1kt0_A FKBP51, 51 kDa FK506-bi 96.6 0.0081 2.8E-07 58.6 10.0 90 221-326 318-407 (457)
202 3rjv_A Putative SEL1 repeat pr 96.6 0.0084 2.9E-07 51.8 8.8 30 303-332 124-157 (212)
203 2ond_A Cleavage stimulation fa 96.5 0.024 8.3E-07 51.6 11.9 83 237-333 81-163 (308)
204 1ihg_A Cyclophilin 40; ppiase 96.5 0.011 3.6E-07 56.2 9.8 72 262-333 223-302 (370)
205 3rjv_A Putative SEL1 repeat pr 96.2 0.039 1.3E-06 47.5 11.2 63 262-333 125-197 (212)
206 2if4_A ATFKBP42; FKBP-like, al 96.2 0.0095 3.3E-07 55.6 7.6 95 222-332 232-327 (338)
207 2v5f_A Prolyl 4-hydroxylase su 96.1 0.094 3.2E-06 39.7 11.8 75 223-303 8-82 (104)
208 2kat_A Uncharacterized protein 96.0 0.04 1.4E-06 41.9 9.0 63 223-293 22-84 (115)
209 1pc2_A Mitochondria fission pr 95.9 0.099 3.4E-06 43.0 11.6 85 260-356 30-118 (152)
210 2ond_A Cleavage stimulation fa 95.9 0.049 1.7E-06 49.5 10.8 98 229-333 108-232 (308)
211 1klx_A Cysteine rich protein B 95.9 0.061 2.1E-06 43.0 10.0 85 229-333 34-126 (138)
212 3bee_A Putative YFRE protein; 95.7 0.059 2E-06 40.3 8.8 82 263-357 7-91 (93)
213 3ffl_A Anaphase-promoting comp 95.7 0.13 4.5E-06 42.8 11.4 104 223-328 23-146 (167)
214 2ff4_A Probable regulatory pro 95.5 0.16 5.4E-06 48.5 13.1 123 221-351 116-253 (388)
215 3txn_A 26S proteasome regulato 94.9 0.42 1.4E-05 45.6 13.6 107 225-335 104-212 (394)
216 2xm6_A Protein corresponding t 94.5 0.24 8.3E-06 48.0 11.3 48 233-290 92-143 (490)
217 1zu2_A Mitochondrial import re 94.5 0.074 2.5E-06 44.1 6.4 48 236-291 62-120 (158)
218 2xm6_A Protein corresponding t 94.4 0.29 9.7E-06 47.5 11.6 92 221-332 40-143 (490)
219 2ooe_A Cleavage stimulation fa 94.1 0.66 2.2E-05 45.4 13.5 55 229-290 330-384 (530)
220 1klx_A Cysteine rich protein B 93.7 0.16 5.6E-06 40.4 7.0 77 235-333 10-90 (138)
221 2ooe_A Cleavage stimulation fa 93.4 0.49 1.7E-05 46.4 11.2 87 233-333 292-385 (530)
222 3mv2_B Coatomer subunit epsilo 93.3 0.55 1.9E-05 43.3 10.7 98 235-351 193-295 (310)
223 1xi4_A Clathrin heavy chain; a 93.3 0.28 9.7E-06 54.0 9.7 95 223-333 1198-1309(1630)
224 3e4b_A ALGK; tetratricopeptide 93.2 0.4 1.4E-05 46.3 10.0 86 227-331 183-278 (452)
225 3bee_A Putative YFRE protein; 93.1 0.44 1.5E-05 35.3 8.0 63 236-311 25-87 (93)
226 1b89_A Protein (clathrin heavy 92.9 0.21 7.2E-06 48.4 7.4 95 215-334 143-237 (449)
227 1xi4_A Clathrin heavy chain; a 92.6 0.39 1.3E-05 53.0 9.6 96 226-334 1055-1164(1630)
228 3ffl_A Anaphase-promoting comp 92.2 0.85 2.9E-05 37.9 9.1 70 218-287 61-147 (167)
229 3e4b_A ALGK; tetratricopeptide 91.5 1.1 3.8E-05 43.1 10.9 80 231-332 262-350 (452)
230 2o8p_A 14-3-3 domain containin 91.5 1.4 4.9E-05 38.4 10.2 61 276-336 139-200 (227)
231 4b4t_R RPN7, 26S proteasome re 91.4 1.8 6.3E-05 41.5 12.2 103 224-334 135-238 (429)
232 3u64_A Protein TP_0956; tetrat 91.0 0.86 2.9E-05 41.6 8.7 84 237-333 180-269 (301)
233 1pc2_A Mitochondria fission pr 90.5 0.98 3.4E-05 37.0 7.9 72 221-304 33-108 (152)
234 1b89_A Protein (clathrin heavy 90.3 0.16 5.6E-06 49.2 3.4 54 264-333 124-177 (449)
235 1nzn_A CGI-135 protein, fissio 89.6 4.4 0.00015 31.9 10.7 83 260-354 33-119 (126)
236 3uzd_A 14-3-3 protein gamma; s 88.6 7.9 0.00027 34.2 12.7 55 279-333 148-203 (248)
237 3ly7_A Transcriptional activat 88.5 1.3 4.3E-05 41.9 8.1 63 262-333 277-339 (372)
238 3efz_A 14-3-3 protein; 14-3-3, 88.5 8.3 0.00029 34.4 12.9 55 279-333 169-226 (268)
239 2br9_A 14-3-3E, 14-3-3 protein 88.3 2.5 8.7E-05 37.1 9.3 55 279-333 147-202 (234)
240 3ubw_A 14-3-3E, 14-3-3 protein 85.9 4.1 0.00014 36.3 9.3 55 279-333 173-228 (261)
241 4b4t_P 26S proteasome regulato 85.7 12 0.0004 36.0 13.5 103 228-335 145-249 (445)
242 3txn_A 26S proteasome regulato 85.3 25 0.00087 33.2 16.0 106 234-347 73-180 (394)
243 3mv2_B Coatomer subunit epsilo 85.0 2.9 9.9E-05 38.4 8.3 58 226-289 106-163 (310)
244 1dce_A Protein (RAB geranylger 84.6 9.9 0.00034 37.8 12.7 88 231-334 39-139 (567)
245 3lpz_A GET4 (YOR164C homolog); 83.8 19 0.00064 33.3 13.2 62 230-293 22-86 (336)
246 2npm_A 14-3-3 domain containin 83.5 4.8 0.00017 35.8 8.7 55 279-334 173-228 (260)
247 4g26_A Pentatricopeptide repea 83.2 8.7 0.0003 37.5 11.5 91 228-332 113-203 (501)
248 3u84_A Menin; MLL, JUND, ledgf 82.7 15 0.00051 34.9 11.9 74 280-356 297-372 (550)
249 4gq4_A Menin; tumor suppressor 82.5 20 0.00068 34.1 12.6 78 280-360 282-361 (489)
250 3re2_A Predicted protein; meni 82.1 22 0.00074 33.2 12.5 74 281-357 276-351 (472)
251 1o9d_A 14-3-3-like protein C; 82.0 3.6 0.00012 36.7 7.3 55 279-333 152-207 (260)
252 1dce_A Protein (RAB geranylger 82.0 6.2 0.00021 39.3 10.0 90 228-333 115-221 (567)
253 3iqu_A 14-3-3 protein sigma; s 81.9 3.8 0.00013 36.0 7.3 55 279-333 150-205 (236)
254 2v6y_A AAA family ATPase, P60 81.0 5.5 0.00019 28.8 6.8 54 303-356 10-65 (83)
255 3mkq_A Coatomer beta'-subunit; 81.0 10 0.00035 38.5 11.6 91 263-354 682-791 (814)
256 2wpv_A GET4, UPF0363 protein Y 80.7 32 0.0011 31.3 13.5 123 224-351 17-142 (312)
257 1nzn_A CGI-135 protein, fissio 80.5 9.1 0.00031 30.1 8.4 40 252-291 63-103 (126)
258 2w2u_A Hypothetical P60 katani 79.9 6.5 0.00022 28.5 6.9 54 304-357 19-74 (83)
259 3dra_A Protein farnesyltransfe 79.5 15 0.0005 33.5 10.9 94 235-337 48-143 (306)
260 4h7y_A Dual specificity protei 79.1 22 0.00076 29.0 10.4 87 237-332 36-122 (161)
261 1y8m_A FIS1; mitochondria, unk 77.3 26 0.00091 28.1 10.5 83 260-354 37-122 (144)
262 2ff4_A Probable regulatory pro 76.2 17 0.00057 34.2 10.6 77 223-307 174-251 (388)
263 3o48_A Mitochondria fission 1 75.9 28 0.00095 27.6 10.9 81 262-355 40-124 (134)
264 1pft_A TFIIB, PFTFIIBN; N-term 73.7 2.3 7.8E-05 27.5 2.6 31 178-210 5-36 (50)
265 2o8p_A 14-3-3 domain containin 73.1 46 0.0016 28.8 13.0 73 282-354 98-175 (227)
266 1vq8_Z 50S ribosomal protein L 72.0 0.89 3.1E-05 33.1 0.3 29 178-208 27-55 (83)
267 3spa_A Mtrpol, DNA-directed RN 71.5 30 0.001 37.1 11.8 93 226-329 133-226 (1134)
268 3ly7_A Transcriptional activat 71.4 20 0.0007 33.6 9.6 33 301-333 274-306 (372)
269 1ya0_A SMG-7 transcript varian 71.0 7.8 0.00027 38.0 6.9 61 264-332 154-214 (497)
270 3o48_A Mitochondria fission 1 70.8 15 0.0005 29.2 7.2 61 223-290 43-106 (134)
271 1wfd_A Hypothetical protein 15 70.8 26 0.00091 25.7 8.3 36 217-252 12-47 (93)
272 4b4t_S RPN3, 26S proteasome re 70.8 7.8 0.00027 38.1 6.8 77 250-332 219-298 (523)
273 3o10_A Sacsin; all-helical dom 69.5 40 0.0014 26.7 9.9 36 207-242 3-38 (141)
274 1y8m_A FIS1; mitochondria, unk 69.3 14 0.00049 29.7 6.9 61 223-290 42-105 (144)
275 4e6h_A MRNA 3'-END-processing 69.2 25 0.00086 35.8 10.6 95 231-333 354-463 (679)
276 3q7a_A Farnesyltransferase alp 68.4 42 0.0015 31.1 11.1 109 202-333 43-154 (349)
277 1dl6_A Transcription factor II 66.8 2.9 0.0001 28.1 2.0 36 173-210 6-42 (58)
278 2yrc_A Protein transport prote 64.9 2.3 7.8E-05 28.8 1.2 31 178-208 9-43 (59)
279 1zbp_A Hypothetical protein VP 63.6 71 0.0024 28.5 11.0 51 229-287 6-56 (273)
280 3dra_A Protein farnesyltransfe 63.5 23 0.00078 32.1 8.1 82 234-331 124-213 (306)
281 1wfd_A Hypothetical protein 15 63.3 25 0.00086 25.8 6.9 35 303-337 14-48 (93)
282 3dss_A Geranylgeranyl transfer 63.3 85 0.0029 28.7 12.0 64 222-290 31-102 (331)
283 4gns_B Protein CSD3, chitin bi 60.2 34 0.0012 35.3 9.5 51 226-284 343-393 (754)
284 2v6x_A Vacuolar protein sortin 58.7 31 0.001 24.7 6.5 36 302-337 11-46 (85)
285 4g26_A Pentatricopeptide repea 58.4 1.3E+02 0.0046 28.9 16.7 83 236-332 86-168 (501)
286 1gh9_A 8.3 kDa protein (gene M 57.8 1.7 6E-05 30.6 -0.5 50 178-245 4-53 (71)
287 4a5x_A MITD1, MIT domain-conta 55.5 38 0.0013 24.4 6.6 44 304-347 16-60 (86)
288 4e6h_A MRNA 3'-END-processing 54.6 62 0.0021 32.8 10.3 97 230-333 388-499 (679)
289 2br9_A 14-3-3E, 14-3-3 protein 53.7 28 0.00094 30.4 6.5 54 237-290 147-201 (234)
290 3dss_A Geranylgeranyl transfer 52.8 64 0.0022 29.5 9.2 82 235-332 125-221 (331)
291 3t5v_B Nuclear mRNA export pro 52.4 98 0.0034 29.7 10.8 73 259-333 173-249 (455)
292 3mkq_B Coatomer subunit alpha; 52.2 76 0.0026 26.3 8.7 100 230-342 15-132 (177)
293 3iqu_A 14-3-3 protein sigma; s 51.5 33 0.0011 29.9 6.6 55 237-291 150-205 (236)
294 4b4t_O 26S proteasome regulato 51.4 1.5E+02 0.0051 27.6 11.8 100 232-331 88-196 (393)
295 4gns_B Protein CSD3, chitin bi 50.7 38 0.0013 35.0 7.9 54 268-329 343-396 (754)
296 3spa_A Mtrpol, DNA-directed RN 50.4 60 0.002 34.9 9.4 85 259-350 124-208 (1134)
297 3uzd_A 14-3-3 protein gamma; s 49.0 37 0.0013 29.8 6.5 56 237-292 148-204 (248)
298 2ijq_A Hypothetical protein; s 48.6 88 0.003 25.5 8.4 65 271-339 41-110 (161)
299 3u64_A Protein TP_0956; tetrat 48.3 23 0.00079 32.1 5.2 52 278-335 179-235 (301)
300 2rpa_A Katanin P60 ATPase-cont 48.2 29 0.00099 24.7 4.7 54 307-363 15-69 (78)
301 2crb_A Nuclear receptor bindin 47.6 33 0.0011 25.3 4.9 51 299-349 9-61 (97)
302 2w2u_A Hypothetical P60 katani 47.5 37 0.0013 24.3 5.3 38 215-252 14-51 (83)
303 2cpt_A SKD1 protein, vacuolar 47.4 40 0.0014 25.9 5.8 36 303-338 17-52 (117)
304 3ubw_A 14-3-3E, 14-3-3 protein 47.3 41 0.0014 29.8 6.5 55 237-291 173-228 (261)
305 2pk7_A Uncharacterized protein 47.3 12 0.00042 26.0 2.5 34 174-209 4-37 (69)
306 2npm_A 14-3-3 domain containin 46.0 44 0.0015 29.6 6.6 54 237-291 173-227 (260)
307 1o9d_A 14-3-3-like protein C; 45.6 44 0.0015 29.6 6.5 55 237-291 152-207 (260)
308 2jmo_A Parkin; IBR, E3 ligase, 43.5 16 0.00055 26.0 2.8 29 178-206 25-58 (80)
309 2cpt_A SKD1 protein, vacuolar 43.5 1.1E+02 0.0036 23.5 7.7 37 218-254 16-52 (117)
310 2jny_A Uncharacterized BCR; st 42.9 14 0.0005 25.5 2.3 33 174-208 6-38 (67)
311 4b4t_P 26S proteasome regulato 42.1 93 0.0032 29.6 8.9 70 261-333 136-206 (445)
312 2v6y_A AAA family ATPase, P60 41.8 44 0.0015 23.9 5.0 37 216-252 7-43 (83)
313 3efz_A 14-3-3 protein; 14-3-3, 40.5 50 0.0017 29.4 6.0 55 237-291 169-226 (268)
314 2js4_A UPF0434 protein BB2007; 39.6 14 0.00046 25.9 1.8 33 175-209 5-37 (70)
315 4b4t_O 26S proteasome regulato 39.1 2.4E+02 0.0082 26.2 11.6 74 268-341 82-164 (393)
316 2jr6_A UPF0434 protein NMA0874 39.0 14 0.00048 25.6 1.8 33 175-209 5-37 (68)
317 2hf1_A Tetraacyldisaccharide-1 38.0 13 0.00046 25.7 1.5 33 175-209 5-37 (68)
318 3q7a_A Farnesyltransferase alp 37.9 94 0.0032 28.7 7.9 82 235-332 140-236 (349)
319 3jyw_9 60S ribosomal protein L 37.4 23 0.0008 24.8 2.7 30 178-209 26-55 (72)
320 1wvo_A Sialic acid synthase; a 37.3 14 0.00049 26.3 1.7 19 117-135 8-26 (79)
321 2xze_A STAM-binding protein; h 36.9 60 0.0021 25.9 5.6 42 303-345 39-80 (146)
322 3ga8_A HTH-type transcriptiona 36.4 35 0.0012 24.0 3.7 29 197-225 35-64 (78)
323 2cwy_A Hypothetical protein TT 35.9 56 0.0019 24.0 4.8 78 270-355 9-88 (94)
324 3mkq_B Coatomer subunit alpha; 35.5 45 0.0016 27.7 4.7 53 269-334 12-64 (177)
325 4b4t_R RPN7, 26S proteasome re 35.0 53 0.0018 31.1 5.9 71 261-336 130-200 (429)
326 2a9u_A Ubiquitin carboxyl-term 34.6 1.3E+02 0.0043 24.0 7.1 43 302-346 40-82 (144)
327 2wm9_A Dedicator of cytokinesi 34.0 1.5E+02 0.0051 28.1 8.8 49 264-314 90-138 (428)
328 2dl1_A Spartin; SPG20, MIT, st 33.0 1.6E+02 0.0056 22.5 7.6 44 277-336 18-61 (116)
329 2ra1_A Surface layer protein; 32.8 3.1E+02 0.011 25.6 11.1 84 272-358 113-224 (412)
330 3j20_Y 30S ribosomal protein S 32.6 18 0.00062 23.3 1.4 26 180-207 21-46 (50)
331 1vh6_A Flagellar protein FLIS; 31.5 1.8E+02 0.0061 23.1 7.6 81 215-296 28-121 (145)
332 2d2s_A Exocyst complex compone 31.2 2.5E+02 0.0086 24.1 12.4 39 214-252 12-50 (235)
333 4a17_Y RPL37A, 60S ribosomal p 29.6 36 0.0012 25.5 2.8 13 196-208 52-64 (103)
334 3myv_A SUSD superfamily protei 28.8 1.1E+02 0.0036 29.2 6.8 34 258-291 186-219 (454)
335 2ct7_A Ring finger protein 31; 28.4 35 0.0012 24.5 2.6 24 180-205 27-50 (86)
336 3kae_A CDC27, possible protein 27.9 2E+02 0.0069 24.0 7.2 76 254-333 56-143 (242)
337 2crb_A Nuclear receptor bindin 27.9 83 0.0028 23.1 4.4 35 260-294 13-47 (97)
338 3kez_A Putative sugar binding 27.7 1.1E+02 0.0039 29.0 6.9 34 258-291 192-225 (461)
339 3j21_g 50S ribosomal protein L 27.5 23 0.00079 23.0 1.2 28 174-207 10-37 (51)
340 3mkr_B Coatomer subunit alpha; 26.9 3.6E+02 0.012 24.5 15.5 27 224-250 106-132 (320)
341 2a9u_A Ubiquitin carboxyl-term 26.5 2.4E+02 0.0082 22.3 8.7 38 265-304 45-82 (144)
342 1m2o_A SEC23, protein transpor 26.3 28 0.00095 36.0 2.3 30 179-208 54-87 (768)
343 3qt1_I DNA-directed RNA polyme 26.0 40 0.0014 26.6 2.6 28 180-209 26-57 (133)
344 4ard_A Capsid protein P27; vir 25.8 54 0.0019 25.2 3.2 28 324-355 6-33 (116)
345 3l8r_A PTCA, putative PTS syst 25.7 2.3E+02 0.0078 21.8 7.9 68 219-293 36-118 (120)
346 1zb1_A BRO1 protein; AIP1, BRO 24.8 4.1E+02 0.014 24.5 12.7 60 304-363 257-321 (392)
347 2k4x_A 30S ribosomal protein S 24.8 28 0.00097 22.9 1.3 28 178-207 18-45 (55)
348 3ghg_A Fibrinogen alpha chain; 24.5 5E+02 0.017 25.3 11.7 74 277-357 114-190 (562)
349 3r9m_A BRO1 domain-containing 24.2 4.2E+02 0.014 24.4 12.3 32 304-335 253-284 (376)
350 3k7a_M Transcription initiatio 24.2 46 0.0016 30.7 3.1 32 178-209 21-53 (345)
351 1l1o_C Replication protein A 7 24.2 24 0.00084 29.3 1.1 28 179-207 44-71 (181)
352 2nut_A Protein transport prote 24.1 32 0.0011 35.6 2.2 15 194-208 82-96 (769)
353 2rpa_A Katanin P60 ATPase-cont 23.9 57 0.002 23.1 2.9 32 267-298 17-48 (78)
354 1l8d_A DNA double-strand break 23.9 80 0.0027 23.5 4.0 19 199-217 48-66 (112)
355 3h0g_I DNA-directed RNA polyme 23.7 44 0.0015 25.4 2.4 29 180-210 6-38 (113)
356 3j21_i 50S ribosomal protein L 23.6 23 0.00079 25.5 0.7 29 178-208 35-63 (83)
357 4a5x_A MITD1, MIT domain-conta 23.4 2E+02 0.007 20.4 7.0 33 221-253 17-49 (86)
358 3mv2_A Coatomer subunit alpha; 23.4 4.2E+02 0.014 24.1 10.1 103 255-357 20-167 (325)
359 3k1s_A PTS system, cellobiose- 23.1 2.4E+02 0.0083 21.2 8.2 70 219-295 21-105 (109)
360 3iz5_m 60S ribosomal protein L 22.3 26 0.00088 25.8 0.8 13 196-208 52-64 (92)
361 3mkq_A Coatomer beta'-subunit; 22.0 1E+02 0.0034 31.0 5.5 49 269-330 659-707 (814)
362 3mzk_B Protein transport prote 22.0 3.3E+02 0.011 25.9 8.7 61 301-362 353-413 (441)
363 2wb7_A PT26-6P; extra chromoso 21.8 2.3E+02 0.0078 27.5 7.4 39 279-317 449-487 (526)
364 3mcx_A SUSD superfamily protei 21.8 1.3E+02 0.0044 28.8 6.0 34 258-291 198-231 (477)
365 2vkj_A TM1634; membrane protei 21.2 1.6E+02 0.0056 21.4 4.8 32 218-249 51-82 (106)
366 3ax2_A Mitochondrial import re 20.9 81 0.0028 22.0 3.1 25 308-332 21-45 (73)
367 3izc_m 60S ribosomal protein R 20.3 29 0.001 25.5 0.7 13 196-208 52-64 (92)
368 3qzr_A 3C protein; chymotrypsi 20.3 1.3E+02 0.0044 25.1 4.8 64 73-138 15-84 (187)
No 1
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=5.3e-59 Score=465.48 Aligned_cols=325 Identities=22% Similarity=0.393 Sum_probs=285.2
Q ss_pred hhhHHhhhhcCCCcCCCCCcchhhHHHHHhcCcCCCCHHHHHHH-HHHHHHHHHHhC--CCCCCHHHHHHHHhhhhcccc
Q 017649 2 LKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLY-AQIANLVNLILQ--WPEISINEIAENFSKLACNAH 78 (368)
Q Consensus 2 ~r~~~~~~~~~~~~~~~~~~~~~~~v~~L~sh~~~~~~~~~~~~-~~~a~~~~~~l~--~~~~~~~~~~~~~~~~~~N~~ 78 (368)
+|+|++.....+. .+...|..|.+|++|.+++..++...+ ..++.++.. ++ ...++.++|..+++++.+|+|
T Consensus 108 lRiL~~~~~~~~~----~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~N~f 182 (490)
T 3n71_A 108 ARIMWRVEREGTG----LTEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQY-WPPQSQQFSMQYISHIFGVINCNGF 182 (490)
T ss_dssp HHHHHHHHHTTSS----BCTTCSSBGGGSCCCGGGCCHHHHHHHHHHHHHHHHH-SCTTSCCCCHHHHHHHHHHHHTTEE
T ss_pred HHHHHHhhccCcc----CcchhhhHHHHHHhhhhhcCchHHHHHHHHHHHHHHH-ccccccCCCHHHHHHHHHHHhccCc
Confidence 6778776544443 234567889999999999998776433 334555543 43 236889999999999999999
Q ss_pred ccccCC-CCceeEEEccccccccCCCccCcEEEEeCC-------------EEEEEEccCCCCCCeeEEeccCCCCCHHHH
Q 017649 79 TICNSE-LRPLGTGLYPVISIINHSCLPNAVLVFEGR-------------LAVVRAVQHVPKGAEVLISYIETAGSTMTR 144 (368)
Q Consensus 79 ~i~~~~-~~~~g~~lyp~~s~~nHsC~PN~~~~~~~~-------------~~~~~a~~~i~~geel~~~Y~~~~~~~~~R 144 (368)
+|.+.+ ..++|.||||.+|+|||||+||+.+.|+++ .++|+|+|||++||||||||++..+++.+|
T Consensus 183 ~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R 262 (490)
T 3n71_A 183 TLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALGKISEGEELTVSYIDFLHLSEER 262 (490)
T ss_dssp EEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCGGGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHH
T ss_pred ccccCCCCccceEEEchhhhhcccCCCCCeeEEecCCccccccccccccceEEEEECCCCCCCCEEEEeecCCCCCHHHH
Confidence 999876 568999999999999999999999999987 999999999999999999999999999999
Q ss_pred HHHHhcCCCeEeeccccCCcCcCCcchhhhhhhcCccCCCCCccceeecCCCCccccCCCCCCCCHHHHHHHHHHHHHHH
Q 017649 145 QKALKEQYLFTCTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILS 224 (368)
Q Consensus 145 ~~~L~~~~~F~C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~ 224 (368)
|+.|+++|+|.|.|.+|.++.. .+.++ ++.+ +..++.+.+..+++.++...
T Consensus 263 ~~~L~~~~~F~C~C~~C~~~~~-----~~~~~-~~~~-----------------------~~~~s~e~v~~~l~~a~~~l 313 (490)
T 3n71_A 263 RRQLKKQYYFDCSCEHCQKGLK-----DDLFL-AAKE-----------------------DPKPSQEVVKEMIQFSKDTL 313 (490)
T ss_dssp HHHHHHHHSSCCCCHHHHHTTT-----HHHHT-CBCS-----------------------SSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCeEeeCCCCCCCCc-----ccchh-hccc-----------------------CCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999632 22222 2211 11345678888889999999
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
+.+..+.++|++++|+.++++++++.++++|++|+.++.++++|+.+|..+|+|++|+.++++++++++++||++||.+|
T Consensus 314 e~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a 393 (490)
T 3n71_A 314 EKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLG 393 (490)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 360 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el~ 360 (368)
..+++||.+|..+|++++|+.++++|++|++.++|++||.|.++.++|.++..|+.
T Consensus 394 ~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~ 449 (490)
T 3n71_A 394 MAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELR 449 (490)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987665
No 2
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=5.3e-59 Score=458.76 Aligned_cols=321 Identities=22% Similarity=0.431 Sum_probs=275.6
Q ss_pred hhhHHhhhhcCCCcCCCCCcchhhHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHhCC--CCCCHHHHHHHHhhhhccccc
Q 017649 2 LKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQW--PEISINEIAENFSKLACNAHT 79 (368)
Q Consensus 2 ~r~~~~~~~~~~~~~~~~~~~~~~~v~~L~sh~~~~~~~~~~~~~~~a~~~~~~l~~--~~~~~~~~~~~~~~~~~N~~~ 79 (368)
+|+|++.+..++. ++.+.+..|.+|++|.+++..++...+......+..+++. ..++.++|.++++++.+|+|+
T Consensus 110 ~Ril~~~~~~~~~----~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~~N~f~ 185 (433)
T 3qww_A 110 ARILAKQKIHPER----TPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKYLEFPDHSSLVVLFAQVNCNGFT 185 (433)
T ss_dssp HHHHHHHHHCCSC----CGGGSSCCGGGCCCCGGGCCHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHhhhcccc----CchhhhhhHHHHHhhhhccChHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHcCCcee
Confidence 6777776655543 3456677888999999999887654433333333434432 346889999999999999999
Q ss_pred cccCCCCceeEEEccccccccCCCccCcEEEEeCCEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeecc
Q 017649 80 ICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 159 (368)
Q Consensus 80 i~~~~~~~~g~~lyp~~s~~nHsC~PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 159 (368)
|.+++...+|.||||.+|+|||||+||+.+.|+|+.++|+|++||++||||||||++..+++.+||+.|+++|+|.|.|.
T Consensus 186 i~~~~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 265 (433)
T 3qww_A 186 IEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECR 265 (433)
T ss_dssp EECTTCCEEEEEECTTGGGSEECSSCSEEEEEETTEEEEEESSCBCTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSH
T ss_pred cccCCccceeEEecccccccCCCCCCCceEEEcCCEEEEEeccCcCCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECC
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcCcCCcchhhhhhhcCccCCCCCccceeecCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCChHHH
Q 017649 160 RCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEV 239 (368)
Q Consensus 160 ~C~~~~~~~~~~~~~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~eA 239 (368)
+|.+++. |....++++ | +.....+++..+.......++........|++++|
T Consensus 266 ~C~~~~~------d~~~~~~~~----~------------------~~~~~~e~v~~~~~~~~~~le~~~~~~~~g~~~eA 317 (433)
T 3qww_A 266 ECTTKDK------DKAKVEVRK----L------------------SSPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSEL 317 (433)
T ss_dssp HHHHCTT------HHHHTCBCC----C------------------SSCCCHHHHHHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred CCCCCCc------chhhhhhhh----c------------------CCCccHHHHHHHHHHHHHHHHHHHHhhhccCHHHH
Confidence 9999632 222222221 1 11234456777776666777777766778999999
Q ss_pred HHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCC
Q 017649 240 VSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGD 319 (368)
Q Consensus 240 ~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~ 319 (368)
+.++++++++.+++||++|+.++.++++|+.+|..+|+|++|+.++++++++++++||++||.+|..+++||.+|+.+|+
T Consensus 318 ~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~ 397 (433)
T 3qww_A 318 LEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLEN 397 (433)
T ss_dssp HHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHH
Q 017649 320 TENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 354 (368)
Q Consensus 320 ~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~ 354 (368)
+++|+.+|++|++|++.++|++||.+.++.++|++
T Consensus 398 ~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~~ 432 (433)
T 3qww_A 398 KAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIES 432 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHhc
Confidence 99999999999999999999999999999998763
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=5.5e-58 Score=451.87 Aligned_cols=316 Identities=27% Similarity=0.461 Sum_probs=271.4
Q ss_pred hhhHHhhhhcCCCcCCCCCcchhhHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHhCCC------CCCHHHHHHHHhhhhc
Q 017649 2 LKLYLRRKLQNDNVIPSTTTDNYSLVEALVAHMSDIDEKQLLLYAQIANLVNLILQWP------EISINEIAENFSKLAC 75 (368)
Q Consensus 2 ~r~~~~~~~~~~~~~~~~~~~~~~~v~~L~sh~~~~~~~~~~~~~~~a~~~~~~l~~~------~~~~~~~~~~~~~~~~ 75 (368)
+|++++..- +. .+..+.|..|.+|++|.++++.++...+..++..+..+++.. ..+.+++.++++++.+
T Consensus 107 ~rill~~~~--~~---~~~~~~~~~~~~L~sh~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (429)
T 3qwp_A 107 GRVVFKLMD--GA---PSESEKLYSFYDLESNINKLTEDRKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEAFAKVIC 181 (429)
T ss_dssp HHHHHHHHH--SC---CCGGGSSSCGGGCCCCGGGCCHHHHHHHHHHHHHHHHHTTTTCCSGGGSCTTCCHHHHHHHHHH
T ss_pred HHHHHHHhc--CC---CCchhhhhhHHHHhhChhhcChhHHHHHHHHHHHHHHHHhhhcCccccCCCHHHHHHHHHHHHh
Confidence 466776432 11 124456778999999999999877666666665566666432 2345689999999999
Q ss_pred cccccccCCCCceeEEEccccccccCCCccCcEEEEeCCEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeE
Q 017649 76 NAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFT 155 (368)
Q Consensus 76 N~~~i~~~~~~~~g~~lyp~~s~~nHsC~PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~ 155 (368)
|+|+|.+.+..++|.||||.+|+|||||.||+.+.|+|.+++|+|+|||++||||||||++..+++.+||+.|+++|+|.
T Consensus 182 N~f~i~~~~~~~~g~~l~~~~s~~NHsC~PN~~~~~~~~~~~~~a~r~I~~GeEl~isY~~~~~~~~~R~~~L~~~~~F~ 261 (429)
T 3qwp_A 182 NSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGEELTICYLDMLMTSEERRKQLRDQYCFE 261 (429)
T ss_dssp HCEEEECTTSCEEEEEECTTGGGCEECSSCSEEEEEETTEEEEEECSCBCTTCEEEECCSCSSCCHHHHHHHHHHHHCCC
T ss_pred cCccccccccccceEEEchhhHhhCcCCCCCeEEEEeCCEEEEEEeeeECCCCEEEEEecCCCCCHHHHHHHHhccCCeE
Confidence 99999988888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCCcCcCCcchhhhhhhcCccCCCCCccceeecCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 017649 156 CTCPRCIKLGQFDDIQESAILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGN 235 (368)
Q Consensus 156 C~C~~C~~~~~~~~~~~~~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~ 235 (368)
|.|.+|.++.. .+.++. .. . .....++.+......+..+|+
T Consensus 262 C~C~~C~~~~~-----~~~~~~---------------~~-~------------------~~~~~~~~ll~~ie~~~~~g~ 302 (429)
T 3qwp_A 262 CDCFRCQTQDK-----DADMLT---------------GD-E------------------QVWKEVQESLKKIEELKAHWK 302 (429)
T ss_dssp CCSHHHHHTTT-----HHHHTC---------------SC-H------------------HHHHHHHHHHHHHHHHHHTTC
T ss_pred eeCCCCCCCcc-----cccccc---------------cc-h------------------hhhHHHHHHHHHHHHHHhhcc
Confidence 99999999631 111111 00 0 011223444555666778899
Q ss_pred hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhh
Q 017649 236 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 315 (368)
Q Consensus 236 ~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~ 315 (368)
+++|++++++++++.++++|++|+.++.++++|+.+|..+|+|++|++++++++++++++||++||.+|..+++||.+|+
T Consensus 303 ~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~ 382 (429)
T 3qwp_A 303 WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQL 382 (429)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHHhh
Q 017649 316 FLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 361 (368)
Q Consensus 316 ~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el~~ 361 (368)
.+|++++|+.+|++|++|++.++|++||.|.+++.+|+++.+|+.+
T Consensus 383 ~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~ 428 (429)
T 3qwp_A 383 HQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECDANIRA 428 (429)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred hcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999874
No 4
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.61 E-value=1.7e-16 Score=143.03 Aligned_cols=82 Identities=29% Similarity=0.420 Sum_probs=68.8
Q ss_pred hhccccccccCCCCceeEEEccc-cccccCCCccCcEEEEe-CCEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhc
Q 017649 73 LACNAHTICNSELRPLGTGLYPV-ISIINHSCLPNAVLVFE-GRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKE 150 (368)
Q Consensus 73 ~~~N~~~i~~~~~~~~g~~lyp~-~s~~nHsC~PN~~~~~~-~~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~ 150 (368)
...|.|.+..+. ...+.++|+. ++++||||.||+...+. +.++.|+|+|+|++|||||++|++.+++
T Consensus 154 ~~~n~f~i~~~~-~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~---------- 222 (247)
T 3rq4_A 154 AGENDFSIMYST-RKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFG---------- 222 (247)
T ss_dssp TTTSCTTEEEET-TTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSS----------
T ss_pred ccCCcEEEEecC-CcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcC----------
Confidence 347888886543 3467899987 78999999999977654 6799999999999999999999999875
Q ss_pred CCCeEeeccccCCcC
Q 017649 151 QYLFTCTCPRCIKLG 165 (368)
Q Consensus 151 ~~~F~C~C~~C~~~~ 165 (368)
.+.|.|.|.+|.+++
T Consensus 223 ~~~f~C~C~~C~~~~ 237 (247)
T 3rq4_A 223 EKNEHCECHTCERKG 237 (247)
T ss_dssp GGGTTCCCHHHHHHT
T ss_pred CCCCEEECCCCCCCC
Confidence 468999999999863
No 5
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=99.51 E-value=5.3e-15 Score=134.56 Aligned_cols=85 Identities=24% Similarity=0.340 Sum_probs=66.6
Q ss_pred HhhhhccccccccCCCCceeEEEccccccccCCCccCcEEEEeCC-EEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHH
Q 017649 70 FSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAVLVFEGR-LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKAL 148 (368)
Q Consensus 70 ~~~~~~N~~~i~~~~~~~~g~~lyp~~s~~nHsC~PN~~~~~~~~-~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L 148 (368)
+.....|.|.|..+.....+......++++||||.|||.+.++|. ++.++|+|||++|||||++|++..++
T Consensus 180 ~~~~~~~dF~i~~s~~~~~a~~~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~-------- 251 (273)
T 3s8p_A 180 LLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFG-------- 251 (273)
T ss_dssp HCCTTTSCTTEEEETTTTEEEEEESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTS--------
T ss_pred HhhhcccccceeccccccccceecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcC--------
Confidence 334457888876544333343344456899999999999888876 89999999999999999999998775
Q ss_pred hcCCCeEeeccccCCc
Q 017649 149 KEQYLFTCTCPRCIKL 164 (368)
Q Consensus 149 ~~~~~F~C~C~~C~~~ 164 (368)
.+.|.|.|.+|.-.
T Consensus 252 --~~~f~C~C~~c~cr 265 (273)
T 3s8p_A 252 --ENNEFCECYTCERR 265 (273)
T ss_dssp --GGGTTCCCHHHHHH
T ss_pred --CCCeEEECCCCcCC
Confidence 35799999999764
No 6
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.42 E-value=1e-12 Score=130.99 Aligned_cols=113 Identities=12% Similarity=-0.065 Sum_probs=107.0
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
+..+.+.|..+..+|+|++|+.++++++++.++++|++|+.++.++.+||.+|..+|+|++|+.+++++++++++++|++
T Consensus 351 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~ 430 (490)
T 3n71_A 351 LRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPS 430 (490)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 34556677788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
||.++..+..|+.++..++++++|+..|++|.+
T Consensus 431 Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 431 HPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999865
No 7
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=99.34 E-value=3.9e-13 Score=108.41 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=49.2
Q ss_pred eeEEEccccccccCCCccCcEEEEe--CCEEEEEEccCCCCCCeeEEeccCCCCCH
Q 017649 88 LGTGLYPVISIINHSCLPNAVLVFE--GRLAVVRAVQHVPKGAEVLISYIETAGST 141 (368)
Q Consensus 88 ~g~~lyp~~s~~nHsC~PN~~~~~~--~~~~~~~a~~~i~~geel~~~Y~~~~~~~ 141 (368)
-+..++|.++++||||.|||...++ +..+.++|+|+|++|||||++|++.+|..
T Consensus 57 d~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 57 MSAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp EEEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred ccccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 5788999999999999999999887 45899999999999999999999998875
No 8
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.32 E-value=6.3e-11 Score=106.41 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=127.3
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.+....++++++....+...++.+|...|++++|++++++++..++...|+.+
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 123 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFH 123 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34456677788899999999999999999888888889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 359 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el 359 (368)
|..+..+.++|.++..+|++++|+.++++|+++.+...|+++|....+...+..+....
T Consensus 124 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~ 182 (283)
T 3edt_B 124 PDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQ 182 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999998888888777765443
No 9
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=99.20 E-value=1.1e-11 Score=108.03 Aligned_cols=55 Identities=27% Similarity=0.529 Sum_probs=41.1
Q ss_pred ccccccCCCccCcEEEE---eC-CEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeec
Q 017649 95 VISIINHSCLPNAVLVF---EG-RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTC 158 (368)
Q Consensus 95 ~~s~~nHsC~PN~~~~~---~~-~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C 158 (368)
.++++||||.||+...+ +| ..+.++|+|+|++|||||++|.+..+.. .+.|.|.|
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~---------~~~~~C~C 182 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDA---------SNKLPCNC 182 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC----------------CCBCCC
T ss_pred hhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcC---------CCCceeEC
Confidence 34688999999998643 34 3789999999999999999999887642 36799998
No 10
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.19 E-value=1.5e-10 Score=103.96 Aligned_cols=128 Identities=14% Similarity=0.041 Sum_probs=118.7
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhh
Q 017649 230 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 309 (368)
Q Consensus 230 ~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~ 309 (368)
....|++++|+..+++++....++.++.++....++..++.++...|++++|+.++++++...+..+|+++|..+..+..
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~ 90 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNN 90 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHH
Confidence 34778999999999999999888888888999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 310 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 310 La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
+|.++..+|++++|+.++++|+++.+...|+++|....+...+..+..
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 138 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQ 138 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988888877776654
No 11
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.16 E-value=1.1e-09 Score=99.81 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=124.5
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|+..+++++......++++++....+...++.++...|++++|++++++++...+..+|+.+|.
T Consensus 72 ~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 151 (311)
T 3nf1_A 72 LNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPD 151 (311)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH
Confidence 34456667788999999999999999888888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 359 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el 359 (368)
.+..+..+|.++...|++++|+.++++|+++.+...|+++|....+...+..+....
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 208 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQ 208 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999998888887777665443
No 12
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=99.13 E-value=2.3e-10 Score=112.18 Aligned_cols=97 Identities=10% Similarity=-0.021 Sum_probs=89.3
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
..+.+.+..+..+|+|++|+.++++++.+.++++|++|+.++..+.+||.+|..+|++++|+.+++++++++++.+|++|
T Consensus 330 ~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~H 409 (429)
T 3qwp_A 330 KVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREH 409 (429)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC
Confidence 44556667778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhhhhHhhhc
Q 017649 301 PLLGLQYYTCGKLEWFL 317 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~ 317 (368)
|.+...+.+|+.+...+
T Consensus 410 p~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 410 SLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 99999999998876543
No 13
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=99.13 E-value=2.3e-10 Score=112.19 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
+..+.+.|..+..+|+|++|+.++++++.+.++++|++|+.++.++++||.+|..+|+|++|+.+++++++++++.+|++
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~ 419 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKD 419 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCC
Confidence 34556677888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHhhhh
Q 017649 300 HPLLGLQYYTCG 311 (368)
Q Consensus 300 hp~~~~~l~~La 311 (368)
||.+.....+|.
T Consensus 420 Hp~~~~l~~~l~ 431 (433)
T 3qww_A 420 HPYISEIKQEIE 431 (433)
T ss_dssp CHHHHHHHHHHH
T ss_pred ChHHHHHHHHHh
Confidence 999988777664
No 14
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.13 E-value=1.3e-09 Score=99.45 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=123.2
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.+...+..+...|++++|+..+++++.+.....++.++....+...++.++...|++++|+.++++++...+..+|+++|
T Consensus 29 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 108 (311)
T 3nf1_A 29 TLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHP 108 (311)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 44556667778999999999999999988777777788888999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
..+..++.+|.++...|++++|+.++++|+++.+..+|+++|....+...+..+..
T Consensus 109 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~ 164 (311)
T 3nf1_A 109 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQ 164 (311)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988888777766643
No 15
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=99.07 E-value=4.2e-11 Score=102.12 Aligned_cols=54 Identities=22% Similarity=0.233 Sum_probs=44.0
Q ss_pred cccccCCCccCcEEE--EeCC--EEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHh
Q 017649 96 ISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALK 149 (368)
Q Consensus 96 ~s~~nHsC~PN~~~~--~~~~--~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~ 149 (368)
+.++||||.|||... +.++ ++.++|+|||++|||||++|.+.......|+..|+
T Consensus 108 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~L~ 165 (166)
T 3f9x_A 108 GRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSKASIEAHPWLK 165 (166)
T ss_dssp GGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCHHHHHHCGGGG
T ss_pred hheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChhhHhhhCchhc
Confidence 467899999998664 3333 68899999999999999999999877776666654
No 16
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=99.02 E-value=1.3e-10 Score=103.65 Aligned_cols=59 Identities=24% Similarity=0.301 Sum_probs=44.9
Q ss_pred Ecccc-ccccCCCccCcEEEE--eC--CEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeecc
Q 017649 92 LYPVI-SIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 159 (368)
Q Consensus 92 lyp~~-s~~nHsC~PN~~~~~--~~--~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 159 (368)
.+... .++||||.||+.+.+ .+ .++.|+|+|+|++|||||++|.+..+.. ...|.|.|.
T Consensus 142 ~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~---------~~~~~C~CG 205 (222)
T 3ope_A 142 RMGNEARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNV---------EKQQLCKCG 205 (222)
T ss_dssp SEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCC---------SCCCBCCCC
T ss_pred cccccceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCC---------cCCCEeeCC
Confidence 34433 478999999997654 23 3688999999999999999999877643 345777765
No 17
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=98.99 E-value=2.5e-10 Score=102.57 Aligned_cols=62 Identities=19% Similarity=0.282 Sum_probs=46.6
Q ss_pred eeEEEccc-cccccCCCccCcEEEE--eC--CEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeecc
Q 017649 88 LGTGLYPV-ISIINHSCLPNAVLVF--EG--RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 159 (368)
Q Consensus 88 ~g~~lyp~-~s~~nHsC~PN~~~~~--~~--~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 159 (368)
+..+.+.. +.++||||.||+.+.+ .+ .++.|+|+|+|++|||||++|....+. ...|.|.|.
T Consensus 157 IDa~~~Gn~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 223 (232)
T 3ooi_A 157 IDAGPKGNYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLG----------NGKTVCKCG 223 (232)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTT----------CTTCBCCCC
T ss_pred EeccccccccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCC----------CCCcEeECC
Confidence 44444544 4578999999997743 22 468899999999999999999877653 345888874
No 18
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.96 E-value=1.7e-08 Score=81.37 Aligned_cols=104 Identities=12% Similarity=0.094 Sum_probs=89.1
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
....+.+..+..+|++++|+..|.+++.+ .|.+ ..++.+++.+|..+|+|++|++.+++++++... .+..+
T Consensus 9 ~a~~~lG~~~~~~~~~~~A~~~y~~Al~~-----~p~~---~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~ 79 (127)
T 4gcn_A 9 IAEKDLGNAAYKQKDFEKAHVHYDKAIEL-----DPSN---ITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-TRADY 79 (127)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-cchhh
Confidence 34445667788999999999999999875 3443 556889999999999999999999999987654 45678
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+.++..++++|.++..+|++++|+.++++|+.+
T Consensus 80 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 80 KLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 889999999999999999999999999999874
No 19
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.92 E-value=2.9e-08 Score=78.78 Aligned_cols=122 Identities=11% Similarity=0.017 Sum_probs=100.3
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
++..+..+...|++++|+..+++++.. .|+++....+...++.++...|++++|+.++++++.. .|.++.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~ 74 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDK 74 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCcc
Confidence 345666778899999999999988764 4667766788889999999999999999999998874 356766
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 359 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el 359 (368)
....++.+|.++..+|++++|+..+++++... |+++........+..+...+
T Consensus 75 ~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-----p~~~~~~~a~~~l~~l~~~~ 126 (129)
T 2xev_A 75 AAGGLLKLGLSQYGEGKNTEAQQTLQQVATQY-----PGSDAARVAQERLQSIRLGQ 126 (129)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTSHHHHHHHHHHHHHC---
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCChHHHHHHHHHHHHHhhh
Confidence 77889999999999999999999999999853 78888888888887765544
No 20
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=98.92 E-value=5.7e-10 Score=102.58 Aligned_cols=54 Identities=24% Similarity=0.328 Sum_probs=41.6
Q ss_pred cccccCCCccCcEEE--EeCC--EEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeecc
Q 017649 96 ISIINHSCLPNAVLV--FEGR--LAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCP 159 (368)
Q Consensus 96 ~s~~nHsC~PN~~~~--~~~~--~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~ 159 (368)
+.++||||.||+... +.++ ++.|+|+|+|++|||||++|....+. ...|.|.|.
T Consensus 191 aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~----------~~~~~C~CG 248 (278)
T 3h6l_A 191 SRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYG----------KEAQKCFCG 248 (278)
T ss_dssp GGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEEC----------SSCEECCCC
T ss_pred hhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCC----------CCCcEeECC
Confidence 457899999998653 2333 68899999999999999999876543 345888774
No 21
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=98.90 E-value=1e-09 Score=109.22 Aligned_cols=93 Identities=14% Similarity=0.115 Sum_probs=77.7
Q ss_pred CCCHHHHHHHHhhhhccccccccCCCCceeEEEccccccccCCCccCcE-EEEeCCEEEEEEccCCCCCCeeEEeccCCC
Q 017649 60 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNAV-LVFEGRLAVVRAVQHVPKGAEVLISYIETA 138 (368)
Q Consensus 60 ~~~~~~~~~~~~~~~~N~~~i~~~~~~~~g~~lyp~~s~~nHsC~PN~~-~~~~~~~~~~~a~~~i~~geel~~~Y~~~~ 138 (368)
.++.+.+...++.+.+++|.+...+....+.+++|.+.++||||.||.. +.++++.+.++|.++|++||||+|||++..
T Consensus 237 ~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~~ 316 (497)
T 3smt_A 237 SFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRS 316 (497)
T ss_dssp CCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSCC
T ss_pred ccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCCC
Confidence 4688889999999999999987666556789999999999999999643 344567899999999999999999999852
Q ss_pred CCHHHHHHHHhcCCCeEeec
Q 017649 139 GSTMTRQKALKEQYLFTCTC 158 (368)
Q Consensus 139 ~~~~~R~~~L~~~~~F~C~C 158 (368)
...|...|||.+.-
T Consensus 317 ------n~~Ll~~YGFv~~~ 330 (497)
T 3smt_A 317 ------NAEFVIHSGFFFDN 330 (497)
T ss_dssp ------HHHHHHHHSCCCTT
T ss_pred ------hHHHHHHCCCCCCC
Confidence 25677799998753
No 22
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=98.87 E-value=5.5e-08 Score=78.29 Aligned_cols=105 Identities=13% Similarity=0.113 Sum_probs=85.6
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
+...+.+..++..|++++|++.|++++.+ .|.+ ..++.+++.+|..+|++++|+..++++++. .|.
T Consensus 14 ~~~~~~G~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~- 79 (126)
T 4gco_A 14 QEEKNKGNEYFKKGDYPTAMRHYNEAVKR-----DPEN---AILYSNRAACLTKLMEFQRALDDCDTCIRL-----DSK- 79 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHhhHHHhhccHHHHHHHHHHHHHh-----hhh-
Confidence 34556777888999999999999998865 3433 456788999999999999999999999874 233
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 346 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~ 346 (368)
....++++|.++..+|++++|+..|++|+++ -|+++...
T Consensus 80 --~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l-----~P~~~~a~ 118 (126)
T 4gco_A 80 --FIKGYIRKAACLVAMREWSKAQRAYEDALQV-----DPSNEEAR 118 (126)
T ss_dssp --CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHH
T ss_pred --hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CcCCHHHH
Confidence 3457899999999999999999999999985 46665443
No 23
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.86 E-value=8.9e-08 Score=79.79 Aligned_cols=108 Identities=12% Similarity=0.065 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhccc---CCc-------cccHHHHHHHHHHHHHhhhhHHHHHHHHHh
Q 017649 218 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY---HPF-------SVNLMQTREKLIKILMELEDWKEALAYCQL 287 (368)
Q Consensus 218 ~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l---~~~-------h~~l~~~~~~La~~~~~~g~~~~Al~~~~~ 287 (368)
..+..+.+.+..++..|++++|+..|.+++.+..... .|. ++....++.+++.+|..+|+|++|+.++.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3456677788888999999999999999988743321 121 455667889999999999999999999999
Q ss_pred hhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 288 TIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 288 ~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
++.. .|.....++.+|.++..+|++++|+..|++|+.+
T Consensus 89 al~~--------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 89 VLKR--------EETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHH--------STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHhc--------CCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 9975 3444567899999999999999999999999987
No 24
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=98.82 E-value=9.4e-10 Score=101.69 Aligned_cols=64 Identities=28% Similarity=0.470 Sum_probs=47.7
Q ss_pred eeEEEccccc-cccCCCccCcEEE--EeC------CEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeec
Q 017649 88 LGTGLYPVIS-IINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTC 158 (368)
Q Consensus 88 ~g~~lyp~~s-~~nHsC~PN~~~~--~~~------~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C 158 (368)
+-...+...+ ++||||.||+... |.. .++.++|+|+|++|||||++|.+.++... ...|.|.|
T Consensus 208 IDa~~~GN~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~--------~~~~~C~C 279 (287)
T 3hna_A 208 IDARFYGNVSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIK--------GKLFSCRC 279 (287)
T ss_dssp EEEEEEECGGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHH--------TTTCCCCC
T ss_pred EeccccCCchheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccC--------CCcCEeeC
Confidence 4455666555 6699999999753 321 28999999999999999999997654321 34788988
Q ss_pred c
Q 017649 159 P 159 (368)
Q Consensus 159 ~ 159 (368)
.
T Consensus 280 G 280 (287)
T 3hna_A 280 G 280 (287)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=98.82 E-value=2e-09 Score=100.39 Aligned_cols=63 Identities=27% Similarity=0.502 Sum_probs=35.0
Q ss_pred cccccCCCccCcEEEE-eC-------CEEEEEEccCCCCCCeeEEeccCCCCCHHH-HHHHHhcCCCeEeec
Q 017649 96 ISIINHSCLPNAVLVF-EG-------RLAVVRAVQHVPKGAEVLISYIETAGSTMT-RQKALKEQYLFTCTC 158 (368)
Q Consensus 96 ~s~~nHsC~PN~~~~~-~~-------~~~~~~a~~~i~~geel~~~Y~~~~~~~~~-R~~~L~~~~~F~C~C 158 (368)
+.++||||+||+.+.. .+ .++.++|+|+|++|||||++|.+..+.... .....+....|.|.|
T Consensus 221 arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~C 292 (302)
T 1ml9_A 221 TRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC 292 (302)
T ss_dssp GGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-----------------------
T ss_pred HHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeC
Confidence 4588999999997643 22 279999999999999999999987765321 111122234577877
No 26
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.80 E-value=5.2e-09 Score=103.00 Aligned_cols=91 Identities=23% Similarity=0.236 Sum_probs=75.0
Q ss_pred CCHHHHHHHHhhhhccccccccCC----CCceeEEEccccccccCCCccCcEEEEeCCEEEEEEccCCCCCCeeEEeccC
Q 017649 61 ISINEIAENFSKLACNAHTICNSE----LRPLGTGLYPVISIINHSCLPNAVLVFEGRLAVVRAVQHVPKGAEVLISYIE 136 (368)
Q Consensus 61 ~~~~~~~~~~~~~~~N~~~i~~~~----~~~~g~~lyp~~s~~nHsC~PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~ 136 (368)
++.+.....++.+.+-+|.+...+ ....+.++.|.+.++||||.||+.+.|+++.+.++|.++|++||||+|||++
T Consensus 184 ~t~e~f~wA~~~v~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~a~~~i~~Geei~~~YG~ 263 (449)
T 3qxy_A 184 RSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSANCLRMVATQPIPKGHEIFNTYGQ 263 (449)
T ss_dssp CCHHHHHHHHHHHHHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECSSEEEEEESSCBCTTCEEEECCSS
T ss_pred CcHHHHHHHHHHHHHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeCCeEEEEECCCcCCCchhhccCCC
Confidence 567777777888888888764321 1246789999999999999999999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHhcCCCeEee
Q 017649 137 TAGSTMTRQKALKEQYLFTCT 157 (368)
Q Consensus 137 ~~~~~~~R~~~L~~~~~F~C~ 157 (368)
.. ...|...|||...
T Consensus 264 ~~------n~~ll~~YGF~~~ 278 (449)
T 3qxy_A 264 MA------NWQLIHMYGFVEP 278 (449)
T ss_dssp CC------HHHHHHHHSCCCC
T ss_pred CC------HHHHHHhCCCCCC
Confidence 33 2567779999874
No 27
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=98.78 E-value=1.7e-07 Score=74.40 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=92.7
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
..+...+..+...|++++|+..+++++.+ .|.+ ..++.+++.++..+|+|++|+..+++++...
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------- 68 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEMIKR-----APED---ARGYSNRAAALAKLMSFPEAIADCNKAIEKD-------- 68 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC--------
Confidence 45566777888999999999999998875 2333 4678889999999999999999999998752
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
|.....++.+|.++..+|++++|+..+++|+++-... ++.|...++...+..+...
T Consensus 69 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~--~~~p~~~~~~~~l~~~~~~ 124 (126)
T 3upv_A 69 PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEV--NNGSSAREIDQLYYKASQQ 124 (126)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--HTTTTHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCccc--CCchhHHHHHHHHHHHHHh
Confidence 3334678999999999999999999999999875322 1234445556666655544
No 28
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=98.78 E-value=3.1e-09 Score=96.81 Aligned_cols=45 Identities=22% Similarity=0.349 Sum_probs=37.0
Q ss_pred cccccCCCccCcEEEE--e---CCEEEEEEccCCCCCCeeEEeccCCCCC
Q 017649 96 ISIINHSCLPNAVLVF--E---GRLAVVRAVQHVPKGAEVLISYIETAGS 140 (368)
Q Consensus 96 ~s~~nHsC~PN~~~~~--~---~~~~~~~a~~~i~~geel~~~Y~~~~~~ 140 (368)
+.++||||.|||...+ + +..+.++|+|||++|||||++|.....+
T Consensus 187 aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~~ 236 (261)
T 2f69_A 187 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSP 236 (261)
T ss_dssp GGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCC
T ss_pred eeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCcccc
Confidence 4688999999998875 2 3345899999999999999999866543
No 29
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=98.76 E-value=4.9e-09 Score=97.47 Aligned_cols=44 Identities=20% Similarity=0.320 Sum_probs=37.0
Q ss_pred cccccCCCccCcEEE--EeC------CEEEEEEccCCCCCCeeEEeccCCCC
Q 017649 96 ISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETAG 139 (368)
Q Consensus 96 ~s~~nHsC~PN~~~~--~~~------~~~~~~a~~~i~~geel~~~Y~~~~~ 139 (368)
+.++||||+||+.+. +.+ .++.++|+|+|++|||||++|.+..+
T Consensus 214 aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 214 SRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp GGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred hheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 458899999999753 322 37999999999999999999988776
No 30
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=98.75 E-value=1.5e-07 Score=78.53 Aligned_cols=111 Identities=9% Similarity=0.067 Sum_probs=88.5
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
..+...+..+...|++++|+..+++++.+ .|.+ ..++.+++.+|..+|+|++|+..+++++... |++
T Consensus 37 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~---~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~-----P~~ 103 (151)
T 3gyz_A 37 DDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYN---VDYIMGLAAIYQIKEQFQQAADLYAVAFALG-----KND 103 (151)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-----CCC
Confidence 44566777788999999999999998765 3444 4467889999999999999999999998743 455
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 352 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L 352 (368)
| ..++++|.++..+|++++|+..|++|+++. |+++........|
T Consensus 104 ~---~~~~~lg~~~~~lg~~~eA~~~~~~al~l~-----~~~~~~~~A~~ll 147 (151)
T 3gyz_A 104 Y---TPVFHTGQCQLRLKAPLKAKECFELVIQHS-----NDEKLKIKAQSYL 147 (151)
T ss_dssp C---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCHHHHHHHHHHH
Confidence 5 457899999999999999999999999863 5666444444443
No 31
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.75 E-value=1.8e-07 Score=78.55 Aligned_cols=115 Identities=14% Similarity=0.127 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCC---c-cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHh
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHP---F-SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 294 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~---~-h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~ 294 (368)
+...+.+.+..+...|++++|+..|.+++++.-..... + .+.-..++.+++.++..+|+|++|+..+.++|+++.+
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 44566778888889999999999999999875331000 1 1122348899999999999999999999999998655
Q ss_pred hcCCCChHHHHHH----hhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 295 VYPQFHPLLGLQY----YTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 295 ~~g~~hp~~~~~l----~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
. +.-.|..+..+ ++.|.++..+|++++|+..|++|+++-
T Consensus 90 ~-~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~ 132 (159)
T 2hr2_A 90 R-GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMI 132 (159)
T ss_dssp H-CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred c-ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 5 35567777778 999999999999999999999999874
No 32
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=98.72 E-value=5.5e-07 Score=75.05 Aligned_cols=98 Identities=12% Similarity=0.091 Sum_probs=81.9
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
..+...+..+...|++++|+..+++++.+. |.+ ..++.+++.+|..+|+|++|+.++++++...
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-------- 75 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIA-----PAN---PIYLSNRAAAYSASGQHEKAAEDAELATVVD-------- 75 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CcC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------
Confidence 445667777889999999999999988752 333 4567889999999999999999999998752
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
|.....++++|.++..+|++++|+..|++|+++-
T Consensus 76 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 76 PKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109 (164)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 3335678999999999999999999999999864
No 33
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.71 E-value=5.3e-07 Score=73.09 Aligned_cols=131 Identities=15% Similarity=0.082 Sum_probs=102.9
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++...... ++......+...++.++...|++++|++++++++...+.. .+.
T Consensus 10 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~ 85 (164)
T 3ro3_A 10 RAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDR 85 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh--CCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCc
Confidence 345556667778899999999999998876542 2344556788899999999999999999999999988765 455
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
+..+..+..+|.++...|++++|+.++++|+++..... +++........+..+..
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~ 140 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYT 140 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcc--chHhHHHHHHHHHHHHH
Confidence 66788899999999999999999999999999876552 34444555555555543
No 34
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=98.71 E-value=4.6e-07 Score=73.87 Aligned_cols=120 Identities=13% Similarity=0.099 Sum_probs=93.7
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.. .|.++ .++..++.++...|++++|+..+++++.. .|.+
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~ 85 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQALCML-----DHYDA---RYFLGLGACRQSLGLYEQALQSYSYGALM-----DINE 85 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCCC
Confidence 34556677788999999999999988764 34443 45678999999999999999999999874 3455
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHHhh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASY 361 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el~~ 361 (368)
|. .++++|.++..+|++++|+..+++|+++. |++|....+..........+..
T Consensus 86 ~~---~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~l~~l~~ 138 (142)
T 2xcb_A 86 PR---FPFHAAECHLQLGDLDGAESGFYSARALA-----AAQPAHEALAARAGAMLEAVTA 138 (142)
T ss_dssp TH---HHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----HTCGGGHHHHHHHHHHHHHHHH
T ss_pred cH---HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCCcchHHHHHHHHHHHHHHHh
Confidence 54 46899999999999999999999999864 4667666666666655555543
No 35
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=98.69 E-value=1.3e-08 Score=84.70 Aligned_cols=45 Identities=18% Similarity=0.313 Sum_probs=40.2
Q ss_pred cccccCCCcc---CcEEEEeCCEEEEEEccCCCCCCeeEEeccCCCCC
Q 017649 96 ISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGS 140 (368)
Q Consensus 96 ~s~~nHsC~P---N~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~~~ 140 (368)
+.++||||.| |+...-.+.++.++|+|+|++||||++.|.+..++
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEETTEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred eeeeeccCChhhcCEEEEEECCEEEEEEccCCCCCCEEEEccCCccCC
Confidence 4588999999 99887677899999999999999999999987765
No 36
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=98.69 E-value=1.5e-08 Score=94.24 Aligned_cols=44 Identities=25% Similarity=0.422 Sum_probs=36.3
Q ss_pred ccccccCCCccCcEEE--EeC------CEEEEEEccCCCCCCeeEEeccCCC
Q 017649 95 VISIINHSCLPNAVLV--FEG------RLAVVRAVQHVPKGAEVLISYIETA 138 (368)
Q Consensus 95 ~~s~~nHsC~PN~~~~--~~~------~~~~~~a~~~i~~geel~~~Y~~~~ 138 (368)
.+.++||||.||+.+. +.+ .++.++|+|+|++|||||++|.+..
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~ 266 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKG 266 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSS
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCc
Confidence 4568999999999764 321 3789999999999999999998763
No 37
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=98.69 E-value=5.2e-07 Score=74.59 Aligned_cols=117 Identities=12% Similarity=0.120 Sum_probs=90.3
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
.......+..+...|++++|+..+++++.. .|.++ .+...++.++..+|+|++|+..+++++.. .|.
T Consensus 21 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~ 87 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSGXYEDAHXVFQALCVL-----DHYDS---RFFLGLGACRQAMGQYDLAIHSYSYGAVM-----DIX 87 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STT
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHc-----CcccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCC
Confidence 344566777888999999999999988764 34443 45678999999999999999999999874 245
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
+| ..++++|.++..+|++++|+..|++|+++. |++|....+......+..
T Consensus 88 ~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~~~~~~~~~~~~~l~ 137 (148)
T 2vgx_A 88 EP---RFPFHAAECLLQXGELAEAESGLFLAQELI-----ANXPEFXELSTRVSSMLE 137 (148)
T ss_dssp CT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----TTCGGGHHHHHHHHHHHH
T ss_pred Cc---hHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----cCCCcchHHHHHHHHHHH
Confidence 55 457899999999999999999999999764 355655555555444433
No 38
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=98.68 E-value=1.4e-08 Score=94.02 Aligned_cols=49 Identities=18% Similarity=0.231 Sum_probs=39.7
Q ss_pred Eccc-cccccCCCccCcEEEE---eC--CEEEEEEccCCCCCCeeEEeccCCCCC
Q 017649 92 LYPV-ISIINHSCLPNAVLVF---EG--RLAVVRAVQHVPKGAEVLISYIETAGS 140 (368)
Q Consensus 92 lyp~-~s~~nHsC~PN~~~~~---~~--~~~~~~a~~~i~~geel~~~Y~~~~~~ 140 (368)
.+.. +.++||||.||+.+.. ++ .++.++|+|+|++|||||++|.+.++.
T Consensus 201 ~~GN~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~ 255 (290)
T 3bo5_A 201 YIGNIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLN 255 (290)
T ss_dssp EEECGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTC
T ss_pred ecCCchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccc
Confidence 3443 4588999999998643 33 479999999999999999999987764
No 39
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=98.68 E-value=9.4e-09 Score=95.61 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=35.1
Q ss_pred cccccCCCccCcEEEEe-----CCEEEEEEccCCCCCCeeEEeccCCC
Q 017649 96 ISIINHSCLPNAVLVFE-----GRLAVVRAVQHVPKGAEVLISYIETA 138 (368)
Q Consensus 96 ~s~~nHsC~PN~~~~~~-----~~~~~~~a~~~i~~geel~~~Y~~~~ 138 (368)
++++||||.|||...+. +..+.++|+|||++|||||++|....
T Consensus 241 ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~ 288 (293)
T 1h3i_A 241 GHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDH 288 (293)
T ss_dssp GGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTB
T ss_pred eeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCC
Confidence 44789999999988762 22358999999999999999997543
No 40
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.65 E-value=5.8e-07 Score=85.48 Aligned_cols=126 Identities=10% Similarity=0.030 Sum_probs=105.0
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.+..+...|++++|+..+++++.+...+ ++.+....+...++.+|..+|++++|+.++.+++++++.. +...+..+.
T Consensus 109 ~g~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~ 185 (383)
T 3ulq_A 109 RGMYELDQREYLSAIKFFKKAESKLIFV--KDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQ 185 (383)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTGGGC--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHH
Confidence 6777788999999999999998875543 4455678899999999999999999999999999999875 555888899
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHH
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 356 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~ 356 (368)
.++++|.++..+|++++|+.++.+|+++.... ++++....+...+..+.
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y 234 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQPQLMGRTLYNIGLCK 234 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998766 34555555555555554
No 41
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.64 E-value=7.8e-07 Score=84.57 Aligned_cols=131 Identities=12% Similarity=0.184 Sum_probs=106.8
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+.+++.+.... +...+....+..+++.+|..+|++++|+++++++++..+.. +++
T Consensus 144 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 220 (383)
T 3ulq_A 144 EFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH-EAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAE--KQP 220 (383)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-STTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHc--CCh
Confidence 345566777788999999999999999987653 33366778899999999999999999999999999998876 678
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 356 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~ 356 (368)
+..+..++++|.++..+|++++|+.++++|+++.+.... .|....+...+..+.
T Consensus 221 ~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~--~~~~~~~~~~l~~~~ 274 (383)
T 3ulq_A 221 QLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI--LPSLPQAYFLITQIH 274 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--GGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc--chhHHHHHHHHHHHH
Confidence 888999999999999999999999999999999876643 133344444444443
No 42
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.63 E-value=1.9e-06 Score=67.35 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=86.4
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++... |.+ ..+...++.++...|++++|+.++++++..... .++.+
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~ 75 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKAKELD-----PTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDY 75 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----Ccc---HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhH
Confidence 344556667788999999999999987652 333 456788999999999999999999999987653 35667
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+.....++.+|.++...|++++|+.++++++++
T Consensus 76 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 76 RQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 777889999999999999999999999999985
No 43
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.61 E-value=1.7e-06 Score=74.38 Aligned_cols=119 Identities=11% Similarity=0.075 Sum_probs=91.3
Q ss_pred HHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCcccc----------HHHHHHHHHHHHHhhhhHHHHHHHH
Q 017649 216 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN----------LMQTREKLIKILMELEDWKEALAYC 285 (368)
Q Consensus 216 ~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~----------l~~~~~~La~~~~~~g~~~~Al~~~ 285 (368)
.......+...+..+...|++++|+..+.+++.+... .+.... ...++.+++.++..+|+|++|+.++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 111 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH--TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT--CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc--ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3445566777888889999999999999999875422 111111 1367889999999999999999999
Q ss_pred HhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHH
Q 017649 286 QLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 349 (368)
Q Consensus 286 ~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~ 349 (368)
.+++.. +|.....++.+|.++..+|++++|+..+++|+.+ .|+++.....+
T Consensus 112 ~~al~~--------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l 162 (198)
T 2fbn_A 112 SKVLKI--------DKNNVKALYKLGVANMYFGFLEEAKENLYKAASL-----NPNNLDIRNSY 162 (198)
T ss_dssp HHHHHH--------STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCHHHHHHH
T ss_pred HHHHHh--------CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCcHHHHHHH
Confidence 999975 2334567899999999999999999999999986 45555444433
No 44
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.59 E-value=1e-06 Score=71.42 Aligned_cols=111 Identities=20% Similarity=0.167 Sum_probs=93.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++...... .+......+..+++.++...|++++|++++++++...+.. .+++
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~ 126 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--KDRI 126 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHc--cchH
Confidence 44556777888999999999999998876543 3344557788899999999999999999999999988754 3567
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~ 336 (368)
..+..+..+|.++...|++++|+.++++|+++.+.
T Consensus 127 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 127 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999998764
No 45
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.58 E-value=1.8e-06 Score=73.55 Aligned_cols=113 Identities=8% Similarity=0.047 Sum_probs=94.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.+.... ...+....+..+++.++...|++++|++++++++...+ ..|..++
T Consensus 28 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~ 104 (203)
T 3gw4_A 28 ARFMLGYVYAFMDRFDEARASFQALQQQAQKS--GDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLA-SLPEDPL 104 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HSCCCHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHc--CCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HcCccHH
Confidence 44556666778899999999999998876543 23556678899999999999999999999999999987 4454555
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
..+..+.++|.++..+|++++|+.++++|+++.+..
T Consensus 105 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 140 (203)
T 3gw4_A 105 AASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA 140 (203)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc
Confidence 888999999999999999999999999999986543
No 46
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.57 E-value=1.8e-06 Score=79.24 Aligned_cols=130 Identities=10% Similarity=0.028 Sum_probs=102.1
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.+......|++++|+..+++++..... .++....+.+..+++.+|..+|++++|+.+++++++.++.. +.+++..+.
T Consensus 121 l~~~~~~~~~~~~Ai~~~~~al~~~~~--~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~ 197 (293)
T 3u3w_A 121 VAAYVLKKVDYEYCILELKKLLNQQLT--GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVK 197 (293)
T ss_dssp HHHHHTTSSCHHHHHHHHHHHHHTCCC--CSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHH
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHH
Confidence 444556778999999999999875322 22233456678999999999999999999999999988654 568888999
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHHh
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEAS 360 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el~ 360 (368)
.++++|.++..+|++++|+.++.+|+++.... .+++....+...+..+...+.
T Consensus 198 ~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 198 VRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCTTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999987654 234445566666666555444
No 47
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=1.3e-06 Score=70.32 Aligned_cols=112 Identities=16% Similarity=0.169 Sum_probs=87.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.. .|++.....+...++.++...|+|++|+.++++++.. . +.+
T Consensus 30 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~----~-~~~- 98 (148)
T 2dba_A 30 QLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK----D-GGD- 98 (148)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----T-SCC-
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh----C-ccC-
Confidence 3455666778899999999999988653 4555555778889999999999999999999998875 2 233
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 351 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~ 351 (368)
...++.+|.++..+|++++|+.++++++.+ .|+++.+...+..
T Consensus 99 --~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~ 141 (148)
T 2dba_A 99 --VKALYRRSQALEKLGRLDQAVLDLQRCVSL-----EPKNKVFQEALRN 141 (148)
T ss_dssp --HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CSSCHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCcHHHHHHHHH
Confidence 466789999999999999999999999975 4566655444433
No 48
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.55 E-value=1.9e-06 Score=81.94 Aligned_cols=130 Identities=10% Similarity=0.090 Sum_probs=104.7
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.+.... +........+..+++.+|..+|+|++|+++++++++..+.. ++.
T Consensus 142 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~ 218 (378)
T 3q15_A 142 EFHFKVAEAYYHMKQTHVSMYHILQALDIYQNH-PLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QND 218 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhC-CCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCH
Confidence 345566777788999999999999999886543 22234678889999999999999999999999999998765 455
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 356 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~ 356 (368)
+..+..+.+||.++..+|++++|+.++++|+++.+.. .+|........+..+.
T Consensus 219 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~~~~~~~~~~la~~~ 271 (378)
T 3q15_A 219 RFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VPDLLPKVLFGLSWTL 271 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CChhHHHHHHHHHHHH
Confidence 6788999999999999999999999999999998876 3344445555555544
No 49
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.54 E-value=3.5e-06 Score=67.18 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=81.3
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|+|++|+.++++++... |.
T Consensus 11 ~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-----p~-- 75 (137)
T 3q49_B 11 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALELD-----GQ-- 75 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT--
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhh-----CcCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----ch--
Confidence 3455667778899999999999998775 2333 4578889999999999999999999998742 23
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~ 336 (368)
....++.+|.++..+|++++|+..+++|+++-..
T Consensus 76 -~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 76 -SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 3457889999999999999999999999987644
No 50
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.54 E-value=1.2e-06 Score=80.34 Aligned_cols=114 Identities=19% Similarity=0.135 Sum_probs=94.0
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.+.... +........+..+++.+|..+|+|++|+.++++++++... ...+
T Consensus 156 ~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~ 232 (293)
T 2qfc_A 156 YIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR--INSM 232 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-CccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcH
Confidence 345566777888999999999999999775542 2222222378899999999999999999999999998753 4566
Q ss_pred hHHHHHHhhhhhHhhhcCChHHH-HHHHHHHHHhhccc
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRIT 337 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA-~~~l~kAl~i~~~~ 337 (368)
..++..++++|.++..+|++++| ..++++|+.+.+..
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~~~~ 270 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHh
Confidence 77889999999999999999999 88899999998765
No 51
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.54 E-value=1e-06 Score=80.88 Aligned_cols=113 Identities=19% Similarity=0.148 Sum_probs=97.2
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.+...+..+...|++++|+..+++++...... +..+.....++.+++.+|..+|+|++|++++++++++.... ..++
T Consensus 157 ~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~--~~~~ 233 (293)
T 3u3w_A 157 IENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI--NSMA 233 (293)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TBCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--CcHH
Confidence 45566777888999999999999999876543 34667778899999999999999999999999999988754 4667
Q ss_pred HHHHHHhhhhhHhhhcCC-hHHHHHHHHHHHHhhccc
Q 017649 302 LLGLQYYTCGKLEWFLGD-TENAIKSMTEAVEILRIT 337 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~-~~eA~~~l~kAl~i~~~~ 337 (368)
..+..++++|.++..+|+ +++|+.++++|+.+.+..
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~~~~ 270 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDIL 270 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 789999999999999995 599999999999998855
No 52
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.52 E-value=3.3e-06 Score=64.68 Aligned_cols=108 Identities=22% Similarity=0.210 Sum_probs=84.4
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~ 71 (118)
T 1elw_A 5 NELKEKGNKALSVGNIDDALQCYSEAIKL-----DPHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL-----KPDW 71 (118)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh-----Cccc
Confidence 44566677778899999999999988764 2333 456778999999999999999999998874 2333
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 349 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~ 349 (368)
...++.+|.++...|++++|+..+++++++ .|+++.....+
T Consensus 72 ---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~~~~~~~l 112 (118)
T 1elw_A 72 ---GKGYSRKAAALEFLNRFEEAKRTYEEGLKH-----EANNPQLKEGL 112 (118)
T ss_dssp ---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHc-----CCCCHHHHHHH
Confidence 456789999999999999999999999864 45665544433
No 53
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.51 E-value=1.6e-06 Score=77.87 Aligned_cols=114 Identities=13% Similarity=0.160 Sum_probs=96.1
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
..++..+..+...|++++|+..+++++. ..|.++....++..++.+|..+|+|++|+..+++++..+ |.+
T Consensus 16 ~~~~~~a~~~~~~g~~~~A~~~~~~~l~-----~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----p~~ 85 (261)
T 3qky_A 16 QEAFERAMEFYNQGKYDRAIEYFKAVFT-----YGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIY-----QID 85 (261)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHGG-----GCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHH-----hCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC-----CCC
Confidence 3456677788899999999999998865 357777778899999999999999999999999998754 567
Q ss_pred hHHHHHHhhhhhHhhh--------cCChHHHHHHHHHHHHhhccccCCCCchHHHHH
Q 017649 301 PLLGLQYYTCGKLEWF--------LGDTENAIKSMTEAVEILRITHGTNSPFMKELI 349 (368)
Q Consensus 301 p~~~~~l~~La~l~~~--------~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~ 349 (368)
|.....++.+|.++.. +|++++|+..++++++.. |+++......
T Consensus 86 ~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~ 137 (261)
T 3qky_A 86 PRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY-----PNHELVDDAT 137 (261)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC-----TTCTTHHHHH
T ss_pred chhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC-----cCchhHHHHH
Confidence 7888899999999999 999999999999999853 6666666554
No 54
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.51 E-value=2.1e-06 Score=81.57 Aligned_cols=112 Identities=11% Similarity=0.004 Sum_probs=95.4
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|++.+++++.+.... ++......++.+|+.+|..+|++++|++++++++.+.+.. .+
T Consensus 183 ~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~---~~ 257 (378)
T 3q15_A 183 QSLFVIAGNYDDFKHYDKALPHLEAALELAMDI--QNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREK---VP 257 (378)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH---CG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh---CC
Confidence 344566777888999999999999999876543 3344677889999999999999999999999999988876 44
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
|..+..++++|.++..+|++++|+.++++|+++....
T Consensus 258 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 294 (378)
T 3q15_A 258 DLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITAR 294 (378)
T ss_dssp GGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTT
T ss_pred hhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc
Confidence 5567889999999999999999999999999987765
No 55
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.48 E-value=1.7e-06 Score=83.96 Aligned_cols=116 Identities=10% Similarity=0.056 Sum_probs=97.0
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccC-CccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYH-PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~-~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
.+......|++++|++.+++++++.....+ ..++..+.++.+++.+|..+|++++|+.++++++.+.+...++.++..+
T Consensus 57 Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~ 136 (472)
T 4g1t_A 57 LAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESP 136 (472)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhH
Confidence 455667889999999999999987654333 3467788889999999999999999999999999999999999999888
Q ss_pred HHHhhhhhHhhhc--CChHHHHHHHHHHHHhhccccCCCCchHH
Q 017649 305 LQYYTCGKLEWFL--GDTENAIKSMTEAVEILRITHGTNSPFMK 346 (368)
Q Consensus 305 ~~l~~La~l~~~~--g~~~eA~~~l~kAl~i~~~~~G~~hp~~~ 346 (368)
..+.++|..+... +++++|+..|++|+++ .|++|...
T Consensus 137 ~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~-----~p~~~~~~ 175 (472)
T 4g1t_A 137 ELDCEEGWTRLKCGGNQNERAKVCFEKALEK-----KPKNPEFT 175 (472)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-----STTCHHHH
T ss_pred HHHHHHHHHHHHHccccHHHHHHHHHHHHHh-----CCCCHHHH
Confidence 8888888776654 5689999999999986 46676543
No 56
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.47 E-value=2.8e-06 Score=72.37 Aligned_cols=114 Identities=11% Similarity=0.045 Sum_probs=94.4
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.+... .+........+..+++.++...|++++|+.++++++...+.. .+.
T Consensus 67 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 143 (203)
T 3gw4_A 67 RALHQVGMVERMAGNWDAARRCFLEERELLAS-LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQA--DDQ 143 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--cch
Confidence 34555667778899999999999999887653 333344677889999999999999999999999999887643 344
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
...+..+..+|.++..+|++++|+.++++|+++.+..
T Consensus 144 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 180 (203)
T 3gw4_A 144 VAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFAEL 180 (203)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc
Confidence 5567788999999999999999999999999998766
No 57
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.47 E-value=2.9e-06 Score=77.78 Aligned_cols=127 Identities=10% Similarity=0.012 Sum_probs=94.7
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH-H
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-G 304 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~-~ 304 (368)
.+..+...|++++|+..+++++...... .+....+.+..+++.+|..+|+|++|+.+++++++.++.. | ..+.. .
T Consensus 121 ~~~~~~~~~~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~-~-~~~~~~~ 196 (293)
T 2qfc_A 121 VAAYVLKKVDYEYCILELKKLLNQQLTG--IDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-H-DNEEFDV 196 (293)
T ss_dssp HHHHHHTSSCHHHHHHHHHHHHTTCCCS--SCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-C-CCHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-C-ccccchH
Confidence 3444567788999999888887654332 2223356788999999999999999999999999988754 3 33433 3
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
..++++|.++..+|++++|+.++++|+++... ..++.....+...+..+...
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~--~~~~~~~~~~~~~lg~~y~~ 248 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR--INSMALIGQLYYQRGECLRK 248 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--TTBCSSHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHh--cCcHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999998743 34455555555555555433
No 58
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.47 E-value=4e-06 Score=80.25 Aligned_cols=126 Identities=14% Similarity=0.170 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcc--------cCCccccHHHHHHHHHHHHHhhhhHHHHHHH
Q 017649 213 IKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL--------YHPFSVNLMQTREKLIKILMELEDWKEALAY 284 (368)
Q Consensus 213 ~~~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~--------l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~ 284 (368)
..........+...+..+...|++++|+..|+++++..... ....++....++.+++.+|..+|+|++|+++
T Consensus 216 ~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~ 295 (370)
T 1ihg_A 216 VDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDS 295 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHH
Confidence 34455566777888889999999999999999998753321 0013455667889999999999999999999
Q ss_pred HHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHH
Q 017649 285 CQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 351 (368)
Q Consensus 285 ~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~ 351 (368)
++++++. +|.....++.+|.++..+|++++|+..|++|+++ .|+++.....+..
T Consensus 296 ~~~al~~--------~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l-----~P~~~~~~~~l~~ 349 (370)
T 1ihg_A 296 CLEALEI--------DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEI-----APEDKAIQAELLK 349 (370)
T ss_dssp HHHHHTT--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHHHHH
T ss_pred HHHHHHh--------CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCCHHHHHHHHH
Confidence 9999974 3444677899999999999999999999999986 3555554444333
No 59
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.46 E-value=1.7e-06 Score=71.49 Aligned_cols=108 Identities=10% Similarity=-0.063 Sum_probs=86.4
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
+..|..+...|++++|++.+++++++ .|++ ..++..++.+|...|++++|+..++++++. .|.++
T Consensus 35 ~~la~~y~~~~~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~-- 99 (150)
T 4ga2_A 35 FYFAKLYYEAKEYDLAKKYICTYINV-----QERD---PKAHRFLGLLYELEENTDKAVECYRRSVEL-----NPTQK-- 99 (150)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH--
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCchHHHHHHHHHHHHh-----CCCCH--
Confidence 45677788999999999999999875 3444 457888999999999999999999999874 24444
Q ss_pred HHHHhhhhhHhhhcCChHHHHH-HHHHHHHhhccccCCCCchHHHHHHHH
Q 017649 304 GLQYYTCGKLEWFLGDTENAIK-SMTEAVEILRITHGTNSPFMKELILKL 352 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~-~l~kAl~i~~~~~G~~hp~~~~l~~~L 352 (368)
..++++|.++...|++.+|.. ++++|+++ -|+||.+..+...|
T Consensus 100 -~~~~~la~~~~~~~~~~~aa~~~~~~al~l-----~P~~~~~~~l~~~l 143 (150)
T 4ga2_A 100 -DLVLKIAELLCKNDVTDGRAKYWVERAAKL-----FPGSPAVYKLKEQL 143 (150)
T ss_dssp -HHHHHHHHHHHHHCSSSSHHHHHHHHHHHH-----STTCHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHcCChHHHHHHHHHHHHHh-----CcCCHHHHHHHHHH
Confidence 468899999999999987665 56899875 58888877666554
No 60
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.46 E-value=1.7e-06 Score=90.17 Aligned_cols=93 Identities=19% Similarity=0.248 Sum_probs=41.0
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
.+.+..+..+|++++|++.|++++++ ++....++.+|+.+|..+|++++|+++++++++. .|..
T Consensus 13 ~nLG~~~~~~G~~~eAi~~~~kAl~l--------~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~ 76 (723)
T 4gyw_A 13 NNLANIKREQGNIEEAVRLYRKALEV--------FPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTF 76 (723)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCC
Confidence 33344444455555555555554433 1112333444455555555555555544444432 1222
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
+..+++||.++..+|++++|+..|++|++
T Consensus 77 ~~a~~nLg~~l~~~g~~~~A~~~~~kAl~ 105 (723)
T 4gyw_A 77 ADAYSNMGNTLKEMQDVQGALQCYTRAIQ 105 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 23344444444444444444444444443
No 61
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.45 E-value=4.8e-06 Score=79.14 Aligned_cols=132 Identities=11% Similarity=0.065 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcC
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 297 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~-~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g 297 (368)
....+...+..+...|++++|+..+++++.. .|.++ ....++..++.+|...|++++|+.++++++...+..
T Consensus 47 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~-- 119 (411)
T 4a1s_A 47 MCLELALEGERLCNAGDCRAGVAFFQAAIQA-----GTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSM-- 119 (411)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh-----cccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--
Confidence 3445666777888999999999999998875 34444 345688899999999999999999999999988776
Q ss_pred CCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHH
Q 017649 298 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEA 359 (368)
Q Consensus 298 ~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el 359 (368)
.++|..+..++.+|.++...|++++|+.++++|+++.... .+++....+...+..+....
T Consensus 120 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~ 179 (411)
T 4a1s_A 120 NDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQL--GDRLSEGRALYNLGNVYHAK 179 (411)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHHc
Confidence 5678899999999999999999999999999999998775 24555555555555554443
No 62
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.44 E-value=1.1e-05 Score=66.16 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcC
Q 017649 218 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP 297 (368)
Q Consensus 218 ~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g 297 (368)
.........+..+...|++++|+..+++++.. .|.+ ..+...++.++...|+|++|+.++.+++...
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~----- 77 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL-----NPSN---AIYYGNRSLAYLRTECYGYALGDATRAIELD----- 77 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----
Confidence 34556677788888999999999999998764 2333 5567889999999999999999999998752
Q ss_pred CCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 298 QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 298 ~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
|.....++.+|.++..+|++++|+.++++|+.+
T Consensus 78 ---~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 78 ---KKYIKGYYRRAASNMALGKFRAALRDYETVVKV 110 (166)
T ss_dssp ---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---cccHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 233456889999999999999999999999975
No 63
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=98.44 E-value=2.7e-06 Score=76.30 Aligned_cols=126 Identities=8% Similarity=0.068 Sum_probs=100.8
Q ss_pred HHHHHHHhhh--------cCChHHHHHHHHHHHHHhhcccCCccccHHHHH--------------HHHHHHHHhhhhHHH
Q 017649 223 LSKKTLALTS--------CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTR--------------EKLIKILMELEDWKE 280 (368)
Q Consensus 223 l~~~a~~~~~--------~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~--------------~~La~~~~~~g~~~~ 280 (368)
+...+..+.. .|++++|+..+++++.. .|.+.....+. ..++.+|...|+|++
T Consensus 92 ~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 166 (261)
T 3qky_A 92 EYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDR-----YPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEA 166 (261)
T ss_dssp HHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhcccccccchhHHHHHHHHHHHHHH-----CcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 4445556666 88999999999988764 35566665555 788999999999999
Q ss_pred HHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhc----------CChHHHHHHHHHHHHhhccccCCCCchHHHHHH
Q 017649 281 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL----------GDTENAIKSMTEAVEILRITHGTNSPFMKELIL 350 (368)
Q Consensus 281 Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~----------g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~ 350 (368)
|+..+++++..+ |.++.....++.+|.++..+ |++++|+..++++++.. |++|.+.+...
T Consensus 167 A~~~~~~~l~~~-----p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~~-----p~~~~~~~a~~ 236 (261)
T 3qky_A 167 AAVTYEAVFDAY-----PDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIF-----PDSPLLRTAEE 236 (261)
T ss_dssp HHHHHHHHHHHC-----TTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHC-----TTCTHHHHHHH
T ss_pred HHHHHHHHHHHC-----CCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHHC-----CCChHHHHHHH
Confidence 999999988743 46676777889999999877 88999999999998754 88999999998
Q ss_pred HHHHHHHHHhhhh
Q 017649 351 KLEEAQAEASYKL 363 (368)
Q Consensus 351 ~L~~~~~el~~~~ 363 (368)
.+..+..++..-.
T Consensus 237 ~l~~~~~~~~~~~ 249 (261)
T 3qky_A 237 LYTRARQRLTELE 249 (261)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 8888877665443
No 64
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.43 E-value=6.5e-06 Score=75.59 Aligned_cols=106 Identities=12% Similarity=-0.067 Sum_probs=88.0
Q ss_pred HHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHH
Q 017649 227 TLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQ 306 (368)
Q Consensus 227 a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~ 306 (368)
+..+...|++++|+..+.+++.+.... + +......++.+++.+|..+|++++|+.++++++.++... .+....+..
T Consensus 44 ~~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~ 119 (292)
T 1qqe_A 44 ATIYRLRKELNLAGDSFLKAADYQKKA-G-NEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR--GQFRRGANF 119 (292)
T ss_dssp HHHHHHTTCTHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHh-C-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHH
Confidence 334567899999999999999886543 2 234557889999999999999999999999999988653 344456788
Q ss_pred HhhhhhHhhhc-CChHHHHHHHHHHHHhhcc
Q 017649 307 YYTCGKLEWFL-GDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 307 l~~La~l~~~~-g~~~eA~~~l~kAl~i~~~ 336 (368)
+.++|.++... |++++|+.+|++|+++...
T Consensus 120 ~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~ 150 (292)
T 1qqe_A 120 KFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 (292)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh
Confidence 99999999996 9999999999999998763
No 65
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=98.41 E-value=2e-07 Score=91.47 Aligned_cols=89 Identities=20% Similarity=0.242 Sum_probs=68.3
Q ss_pred CCCHHHHHHHHhhhhccccccccCCCCceeEEEccccccccCCCccCc---EEEEe--------CCEEEEEEccCCCCCC
Q 017649 60 EISINEIAENFSKLACNAHTICNSELRPLGTGLYPVISIINHSCLPNA---VLVFE--------GRLAVVRAVQHVPKGA 128 (368)
Q Consensus 60 ~~~~~~~~~~~~~~~~N~~~i~~~~~~~~g~~lyp~~s~~nHsC~PN~---~~~~~--------~~~~~~~a~~~i~~ge 128 (368)
..+.+.+...++.+.+.+|.+.+. -+.++.|.+.++||+|.||. .+.++ +..++++|.++|++||
T Consensus 158 ~~t~~~f~wA~~~v~SRaf~~~~~----~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Ge 233 (440)
T 2h21_A 158 PVTLDDFFWAFGILRSRAFSRLRN----ENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGE 233 (440)
T ss_dssp CCCHHHHHHHHHHHHHHCBCCC-------CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTS
T ss_pred CCCHHHHHHHHHHhcccceeccCC----CceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCC
Confidence 357888888889999999976432 36799999999999999974 33332 2479999999999999
Q ss_pred eeEEeccCCCCCHHHHHHHHhcCCCeEee
Q 017649 129 EVLISYIETAGSTMTRQKALKEQYLFTCT 157 (368)
Q Consensus 129 el~~~Y~~~~~~~~~R~~~L~~~~~F~C~ 157 (368)
||+|||++.. + ...|...|||.+.
T Consensus 234 ei~~sYG~~~-~----N~~LL~~YGFv~~ 257 (440)
T 2h21_A 234 QVYIQYDLNK-S----NAELALDYGFIEP 257 (440)
T ss_dssp BCEECSCTTC-C----HHHHHHHSSCCCS
T ss_pred EEEEeCCCCC-C----HHHHHHhCCCCcC
Confidence 9999999863 1 1456669999765
No 66
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.41 E-value=1.1e-05 Score=62.91 Aligned_cols=98 Identities=16% Similarity=0.129 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
.......+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++.+++.. .+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~ 78 (131)
T 2vyi_A 12 AERLKTEGNEQMKVENFEAAVHFYGKAIEL-----NPAN---AVYFCNRAAAYSKLGNYAGAVQDCERAICI-----DPA 78 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT
T ss_pred hHHHHHHHHHHHHccCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhhchHHHHHHHHHHHhc-----Ccc
Confidence 344556677778899999999999988764 2333 456788999999999999999999999874 233
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+ ...++.+|.++...|++++|+.++++++.+
T Consensus 79 ~---~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 79 Y---SKAYGRMGLALSSLNKHVEAVAYYKKALEL 109 (131)
T ss_dssp C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred C---HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 3 456789999999999999999999999986
No 67
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.41 E-value=5e-06 Score=65.33 Aligned_cols=96 Identities=15% Similarity=0.136 Sum_probs=78.3
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++... +.
T Consensus 18 ~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-----~~-- 82 (133)
T 2lni_A 18 MVKNKGNECFQKGDYPQAMKHYTEAIKR-----NPKD---AKLYSNRAACYTKLLEFQLALKDCEECIQLE-----PT-- 82 (133)
T ss_dssp HHHHHHHHHHHTTCSHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-----TT--
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----CC--
Confidence 4455666777899999999999988753 2333 4567889999999999999999999998742 23
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
....++.+|.++..+|++++|+.++++++.+
T Consensus 83 -~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 83 -FIKGYTRKAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -chHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 3456789999999999999999999999986
No 68
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.40 E-value=9.5e-07 Score=69.41 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=76.7
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhh
Q 017649 233 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 312 (368)
Q Consensus 233 ~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~ 312 (368)
.|++++|+..+++++.+ ++.++....++.+++.+|..+|++++|+.++++++.. .|.+ ...++.+|.
T Consensus 3 ~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~ 69 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-----FPNH---QALRVFYAM 69 (117)
T ss_dssp ----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---hHHHHHHHH
Confidence 57888999999888753 2335667788999999999999999999999999874 2344 456789999
Q ss_pred HhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHH
Q 017649 313 LEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELIL 350 (368)
Q Consensus 313 l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~ 350 (368)
++..+|++++|+..+++|+.. .|++|.+.....
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~ 102 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAE-----TSDDETIQSYKQ 102 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHH-----HCCCHHHHHTHH
T ss_pred HHHHcCCHHHHHHHHHHHHHh-----CCCcHHHHHHHH
Confidence 999999999999999999875 355665544433
No 69
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.38 E-value=9.7e-06 Score=73.66 Aligned_cols=128 Identities=16% Similarity=0.124 Sum_probs=101.5
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~-~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
.+...+..+...|++++|+..+++++.. .|.++ ....+...++.++...|++++|++++++++...+.. +++
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~ 79 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQ 79 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhh-----CcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcc--ccc
Confidence 3455677778899999999999998875 34444 345788899999999999999999999999988776 567
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
|..+..+..+|.++...|++++|+.++++|+++.... ++++....+...+..+...
T Consensus 80 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~ 135 (338)
T 3ro2_A 80 LGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISREL--NDKVGEARALYNLGNVYHA 135 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHh--cCchHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999988765 2333344444455444433
No 70
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.37 E-value=9e-06 Score=76.57 Aligned_cols=135 Identities=19% Similarity=0.132 Sum_probs=109.0
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.+.... .++.....+...++.++...|++++|+.++++++...... .+++
T Consensus 229 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~--~~~~ 304 (406)
T 3sf4_A 229 AYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--NDRI 304 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhC--cCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc--CCcH
Confidence 44556667788999999999999998876542 3455667888999999999999999999999999988765 3467
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHHhhh
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 362 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el~~~ 362 (368)
..+..+..+|.++..+|++++|+.++++|+++.... .+.+....+...+..+...+...
T Consensus 305 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~ 363 (406)
T 3sf4_A 305 GEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREV--GDKSGELTARLNLSDLQMVLGLS 363 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh--cCCcchhHHHHHHHHHHHHhhHh
Confidence 778899999999999999999999999999998766 23445566677777776666544
No 71
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=98.36 E-value=1.2e-05 Score=69.96 Aligned_cols=106 Identities=10% Similarity=0.113 Sum_probs=83.1
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHH----------------HHHHHHhhhhHHHHHHH
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREK----------------LIKILMELEDWKEALAY 284 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~----------------La~~~~~~g~~~~Al~~ 284 (368)
..++..+..+...|++++|+..+++++... |.+ ..++.. ++.+|...|++++|+..
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~~---~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~ 76 (208)
T 3urz_A 5 DEMLQKVSAAIEAGQNGQAVSYFRQTIALN-----IDR---TEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLF 76 (208)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----HHH---HHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-----CCC---hHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHH
Confidence 445667778889999999999999987752 222 233344 99999999999999999
Q ss_pred HHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHH
Q 017649 285 CQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 347 (368)
Q Consensus 285 ~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~ 347 (368)
+++++... |.+ ...++.+|.++..+|++++|+..|++|+++ .|+++....
T Consensus 77 ~~~al~~~-----p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~~~a~~ 126 (208)
T 3urz_A 77 YKELLQKA-----PNN---VDCLEACAEMQVCRGQEKDALRMYEKILQL-----EADNLAANI 126 (208)
T ss_dssp HHHHHHHC-----TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTCHHHHH
T ss_pred HHHHHHHC-----CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCCHHHHH
Confidence 99998742 333 466899999999999999999999999985 466664433
No 72
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=98.35 E-value=2.4e-06 Score=67.97 Aligned_cols=94 Identities=11% Similarity=-0.056 Sum_probs=76.8
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
+..+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+..+++++.. .|.++
T Consensus 21 ~~~g~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~-- 85 (121)
T 1hxi_A 21 MEEGLSMLKLANLAEAALAFEAVCQK-----EPER---EEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKDI-- 85 (121)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH--
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH--
Confidence 44556677889999999999998764 3443 456788999999999999999999998874 34444
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..++.+|.++..+|++++|+..+++++++
T Consensus 86 -~~~~~la~~~~~~g~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 86 -AVHAALAVSHTNEHNANAALASLRAWLLS 114 (121)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999864
No 73
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.35 E-value=1.5e-05 Score=74.94 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=95.3
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
+...+..+...|++++|...+++++.+.... ........+..+++.++...|++++|++++++++...+...++.+|.
T Consensus 56 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~ 133 (373)
T 1hz4_A 56 TSVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM 133 (373)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH
Confidence 3444556677899999999999998875542 22334566788899999999999999999999999999887788899
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
.+..+..+|.++...|++++|+.++++|+++....
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 168 (373)
T 1hz4_A 134 HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSY 168 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999987654
No 74
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.34 E-value=7.8e-06 Score=71.90 Aligned_cols=117 Identities=17% Similarity=0.157 Sum_probs=91.1
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.++..+..+...|++++|+..+++++.. .|.++....++..++.+|...|+|++|+..+++++..+ |.++
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~~-----~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~-----P~~~ 75 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDNR-----YPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN-----PTHP 75 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC-----cCCC
Confidence 4556677788899999999999998764 46666677888999999999999999999999988643 5667
Q ss_pred HHHHHHhhhhhHhhh------------------cCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWF------------------LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 353 (368)
Q Consensus 302 ~~~~~l~~La~l~~~------------------~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~ 353 (368)
.....++.+|.++.. +|++++|+..++++++. -|+++...+....+.
T Consensus 76 ~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~-----~P~~~~a~~a~~~l~ 140 (225)
T 2yhc_A 76 NIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRG-----YPNSQYTTDATKRLV 140 (225)
T ss_dssp THHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTT-----CTTCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHH-----CcCChhHHHHHHHHH
Confidence 666677888877765 57889999999998764 367776665554443
No 75
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.34 E-value=2.1e-06 Score=83.43 Aligned_cols=91 Identities=9% Similarity=-0.077 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcC-CCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccC
Q 017649 261 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 339 (368)
Q Consensus 261 l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g-~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G 339 (368)
...+++.|+.++..+|++++|++++++++++.+...+ ..+|..+..+.++|.++..+|++++|+.++++|+.+.....+
T Consensus 50 ~a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~ 129 (472)
T 4g1t_A 50 KATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSS 129 (472)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccc
Confidence 3566788999999999999999999999999988887 568999999999999999999999999999999999998888
Q ss_pred CCCchHHHHHHH
Q 017649 340 TNSPFMKELILK 351 (368)
Q Consensus 340 ~~hp~~~~l~~~ 351 (368)
+.++...++...
T Consensus 130 ~~~~~~~~~~~~ 141 (472)
T 4g1t_A 130 PYRIESPELDCE 141 (472)
T ss_dssp SSCCCCHHHHHH
T ss_pred ccchhhHHHHHH
Confidence 777655554433
No 76
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=98.34 E-value=7.9e-06 Score=76.92 Aligned_cols=107 Identities=12% Similarity=0.134 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccC-------CccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYH-------PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~-------~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
........+..+...|++++|+..|++++.+...... ...+....++.+++.+|..+|+|++|+.++++++..
T Consensus 146 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 225 (336)
T 1p5q_A 146 QSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALEL 225 (336)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4455667778888999999999999999876421100 001223578899999999999999999999999975
Q ss_pred HHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 292 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 292 ~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
. |.....++++|.++..+|++++|+..|++|+++
T Consensus 226 ~--------p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 226 D--------SNNEKGLSRRGEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp C--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred C--------CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 2 334567899999999999999999999999986
No 77
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.33 E-value=8.6e-06 Score=77.38 Aligned_cols=130 Identities=11% Similarity=0.051 Sum_probs=102.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.+.... ........++..++.+|...|++++|+.++++++...... .+++
T Consensus 225 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 300 (411)
T 4a1s_A 225 ACGNLGNTYYLLGDFQAAIEHHQERLRIAREF--GDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVEL--GERE 300 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhc--CCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHc--CCHH
Confidence 44456667788999999999999998876542 2344566788999999999999999999999999988765 5666
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
..+..+..+|.++..+|++++|+.++++|+.+.... .+++....+...+..+..
T Consensus 301 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~~~~~~~~la~~~~ 354 (411)
T 4a1s_A 301 VEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQEL--GDRIGEARACWSLGNAHS 354 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHC--CChHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999987766 233444445555555443
No 78
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.32 E-value=1.3e-05 Score=75.42 Aligned_cols=127 Identities=16% Similarity=0.134 Sum_probs=101.3
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~-~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
+...+..+...|++++|+..+++++.. .|.++ ....++..++.++...|++++|+.++++++...+.. .++|
T Consensus 12 l~~~g~~~~~~g~~~~A~~~~~~al~~-----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 84 (406)
T 3sf4_A 12 LALEGERLCKSGDCRAGVSFFEAAVQV-----GTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTI--GDQL 84 (406)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhc-----CcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc--cccH
Confidence 445666778899999999999998875 34444 346788899999999999999999999999988766 5678
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
..+..+..+|.++...|++++|+.++.+|+++..... +++....+...+..+...
T Consensus 85 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~~~~~~~~~~~l~~~~~~ 139 (406)
T 3sf4_A 85 GEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN--DKVGEARALYNLGNVYHA 139 (406)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcc--cccchHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999887662 333444445455444433
No 79
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.32 E-value=5.7e-06 Score=77.50 Aligned_cols=107 Identities=13% Similarity=0.144 Sum_probs=83.6
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|+..+++++.. .|.+ ..++..++.+|...|++++|+.++++++.. +|.
T Consensus 216 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~ 279 (365)
T 4eqf_A 216 QTGLGVLFHLSGEFNRAIDAFNAALTV-----RPED---YSLWNRLGATLANGDRSEEAVEAYTRALEI--------QPG 279 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCC
Confidence 445566677889999999999998875 2333 456788999999999999999999999875 344
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
....++++|.++..+|++++|+.++++|+++.....|+.|+..
T Consensus 280 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 322 (365)
T 4eqf_A 280 FIRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQVPH 322 (365)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC--------
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCcccch
Confidence 4677899999999999999999999999999988888766543
No 80
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.31 E-value=2.5e-05 Score=60.12 Aligned_cols=95 Identities=21% Similarity=0.295 Sum_probs=76.2
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|++.+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .+.+
T Consensus 12 ~~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~-- 76 (125)
T 1na0_A 12 WYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN-- 76 (125)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC--
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH-----CcCc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh-----CCcc--
Confidence 444556677889999999999988764 2333 356778999999999999999999998864 2333
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...++.+|.++...|++++|+.++++++++
T Consensus 77 -~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 77 -AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 106 (125)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 356788999999999999999999999875
No 81
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.29 E-value=6.3e-06 Score=85.80 Aligned_cols=104 Identities=20% Similarity=0.215 Sum_probs=86.7
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
....+.+..+...|++++|+..+++++++ ++....++.+|+.+|..+|++++|+++++++++. +
T Consensus 44 ~a~~nLg~~l~~~g~~~eA~~~~~~Al~l--------~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l--------~ 107 (723)
T 4gyw_A 44 AAHSNLASVLQQQGKLQEALMHYKEAIRI--------SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQI--------N 107 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------C
Confidence 45566778888999999999999999875 2334667899999999999999999999999974 3
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
|..+..+++||.++..+|++++|+..|++|+++ .|+++..
T Consensus 108 P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l-----~P~~~~a 147 (723)
T 4gyw_A 108 PAFADAHSNLASIHKDSGNIPEAIASYRTALKL-----KPDFPDA 147 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCChHH
Confidence 445667899999999999999999999999985 4555533
No 82
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.27 E-value=1.4e-05 Score=73.78 Aligned_cols=111 Identities=10% Similarity=0.020 Sum_probs=89.0
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.+.+.+..+...|++++|+..+++++.+.... + +......++.+++.+|.. |++++|++++++++++++.. ...+
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g-~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~--~~~~ 152 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN-G-TPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENE--ERLR 152 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT-T-CHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhC--CChh
Confidence 34455566677899999999999998876432 2 223456788899999988 99999999999999988753 2344
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
..+..+.++|.++..+|++++|+.++++|+.+....
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 567889999999999999999999999999987654
No 83
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.26 E-value=2e-05 Score=71.56 Aligned_cols=131 Identities=15% Similarity=0.090 Sum_probs=102.7
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.+.... +.......+...++.++...|++++|+.++++++...... .+++
T Consensus 185 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~ 260 (338)
T 3ro2_A 185 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEF--GDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQL--KDRA 260 (338)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhh--cchh
Confidence 34455666778899999999999998875542 3345567788999999999999999999999999888764 4567
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
..+..+..+|.++...|++++|+.++++|+++..... +++....+...+..+...
T Consensus 261 ~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~~~~~~~~~~la~~~~~ 315 (338)
T 3ro2_A 261 VEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELK--DRIGEGRACWSLGNAYTA 315 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999876652 233444455555555443
No 84
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.26 E-value=1.1e-05 Score=74.46 Aligned_cols=122 Identities=16% Similarity=0.101 Sum_probs=94.2
Q ss_pred HHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHH
Q 017649 228 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 307 (368)
Q Consensus 228 ~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l 307 (368)
..+...|++++|+..+.+++.+.... + +......++.+++.+|..+|++++|+.+++++++++... .+....+..+
T Consensus 44 ~~~~~~g~~~~A~~~~~~al~~~~~~-~-~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~--g~~~~~a~~~ 119 (307)
T 2ifu_A 44 VAFKNAKQLEQAKDAYLQEAEAHANN-R-SLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVEN--GTPDTAAMAL 119 (307)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTT--TCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCHHHHHHHH
Confidence 44667899999999999998876543 2 234567888999999999999999999999999988643 3444567899
Q ss_pred hhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHH
Q 017649 308 YTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQ 356 (368)
Q Consensus 308 ~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~ 356 (368)
.++|.++.. |++++|+.+|++|+++.... |. .+....+...+..+.
T Consensus 120 ~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~-~~-~~~~~~~~~~lg~~~ 165 (307)
T 2ifu_A 120 DRAGKLMEP-LDLSKAVHLYQQAAAVFENE-ER-LRQAAELIGKASRLL 165 (307)
T ss_dssp HHHHHHHTT-TCHHHHHHHHHHHHHHHHHT-TC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCHHHHHHHHHHHHHHHHhC-CC-hhHHHHHHHHHHHHH
Confidence 999999998 99999999999999988753 21 223344444554443
No 85
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.25 E-value=3.1e-06 Score=83.83 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=84.2
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
..+..+...|++++|++.+++++++ +| ....++.+++.+|..+|++++|+++++++++. +|..+
T Consensus 11 ~lg~~~~~~g~~~~A~~~~~~Al~~-----~p---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l--------~p~~~ 74 (477)
T 1wao_1 11 TQANDYFKAKDYENAIKFYSQAIEL-----NP---SNAIYYGNRSLAYLRTECYGYALGDATRAIEL--------DKKYI 74 (477)
T ss_dssp SSSSSTTTTTCHHHHHHHHHHHHHH-----CT---TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--------CTTCH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHh-----CC---ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CCCCH
Confidence 3445567889999999999999875 23 33677889999999999999999999999875 44556
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHH
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 349 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~ 349 (368)
..++++|.++..+|++++|++.+++|+++ .|+++.....+
T Consensus 75 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~~~~~~~l 114 (477)
T 1wao_1 75 KGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDKDAKMKY 114 (477)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTCTTHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHHHHHH
Confidence 77899999999999999999999999986 45555444333
No 86
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.24 E-value=7.8e-06 Score=74.83 Aligned_cols=98 Identities=13% Similarity=0.135 Sum_probs=81.3
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.+...+..+...|++++|+..+++++.. .|.+ ..++.+++.+|..+|+|++|+.++++++.. +|
T Consensus 6 ~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~A~~~~~~al~~--------~p 69 (281)
T 2c2l_A 6 ELKEQGNRLFVGRKYPEAAACYGRAITR-----NPLV---AVYYTNRALCYLKMQQPEQALADCRRALEL--------DG 69 (281)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--------CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh--------CC
Confidence 4556677788999999999999998875 3433 456789999999999999999999999874 33
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
.....++.+|.++..+|++++|+..+++|+++--
T Consensus 70 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 103 (281)
T 2c2l_A 70 QSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAK 103 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCc
Confidence 4456789999999999999999999999998643
No 87
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.23 E-value=4e-05 Score=70.19 Aligned_cols=111 Identities=16% Similarity=0.109 Sum_probs=88.7
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh-hhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~-g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
..+.+.+..+...|++++|+..+++++.+.... + +......++.+++.+|... |++++|+.++++++++.... ..
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~-g-~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~--~~ 153 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHR-G-QFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQD--QS 153 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHT--TC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhC--CC
Confidence 445566777788899999999999999876432 1 2233467888999999996 99999999999999987632 12
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
.+..+..+.++|.++..+|++++|+.++++|+++..
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 334466789999999999999999999999998653
No 88
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.21 E-value=1.5e-05 Score=67.13 Aligned_cols=92 Identities=17% Similarity=0.104 Sum_probs=72.1
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.+......+++++|...+.++..+ .|.+ ..+...++.++..+|++++|++.++++++. +|....
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~a~~~-----~~~~---~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~--------~p~~~~ 142 (184)
T 3vtx_A 79 LGSANFMIDEKQAAIDALQRAIAL-----NTVY---ADAYYKLGLVYDSMGEHDKAIEAYEKTISI--------KPGFIR 142 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---hHHHHHHHHHHHHhCCchhHHHHHHHHHHh--------cchhhh
Confidence 344555677888888877777653 2333 345678999999999999999999998864 233446
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.++++|.++..+|++++|+..+++|+++
T Consensus 143 ~~~~lg~~~~~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 143 AYQSIGLAYEGKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhC
Confidence 7889999999999999999999999975
No 89
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.21 E-value=1.9e-05 Score=77.52 Aligned_cols=108 Identities=16% Similarity=0.240 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhccc--C-----CccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhh
Q 017649 218 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY--H-----PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 290 (368)
Q Consensus 218 ~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l--~-----~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~ 290 (368)
.........+..+...|++++|+..|++++.+..... . ..+.....++.+++.+|..+|+|++|+.++.+++.
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 3445667778888899999999999999987642210 0 01223367888999999999999999999999997
Q ss_pred hHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 291 VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 291 ~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.. |.....++++|.++..+|++++|+..|++|+++
T Consensus 346 ~~--------p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 346 LD--------SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV 380 (457)
T ss_dssp HS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cC--------CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 42 333567899999999999999999999999975
No 90
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.18 E-value=4.2e-05 Score=70.33 Aligned_cols=113 Identities=18% Similarity=0.165 Sum_probs=87.5
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~-~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
.....+..+...|++++|+..+++++... |.++ ....+...++.++...|++++|+.++++++.. +
T Consensus 236 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--------~ 302 (359)
T 3ieg_A 236 KLIESAEELIRDGRYTDATSKYESVMKTE-----PSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQM--------E 302 (359)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----CSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------C
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcC-----CCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Confidence 34455777888999999999999887643 3333 33456778999999999999999999999875 2
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 352 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L 352 (368)
|.....++.+|.++...|++++|+..+++|+++ .|+++.....+..+
T Consensus 303 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~-----~p~~~~~~~~l~~~ 349 (359)
T 3ieg_A 303 PDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEH-----NENDQQIREGLEKA 349 (359)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTCHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCChHHHHHHHHH
Confidence 333457889999999999999999999999975 46666554444443
No 91
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.16 E-value=2.1e-05 Score=68.87 Aligned_cols=97 Identities=15% Similarity=0.047 Sum_probs=76.7
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh-----------hhHHHHHHHHHhhhh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----------EDWKEALAYCQLTIP 290 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~-----------g~~~~Al~~~~~~l~ 290 (368)
.....+..+...|++++|+..+++++++ .|++ ..++.+++.++..+ |++++|+..++++++
T Consensus 41 a~~~lg~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 112 (217)
T 2pl2_A 41 ALYWLARTQLKLGLVNPALENGKTLVAR-----TPRY---LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAER 112 (217)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHH
Confidence 3445666777899999999999998875 2433 45678899999999 999999999999987
Q ss_pred hHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 291 VYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 291 ~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
. .|.++ ..++.+|.++..+|++++|+..+++|+++-
T Consensus 113 ~-----~P~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 148 (217)
T 2pl2_A 113 V-----NPRYA---PLHLQRGLVYALLGERDKAEASLKQALALE 148 (217)
T ss_dssp H-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred h-----CcccH---HHHHHHHHHHHHcCChHHHHHHHHHHHhcc
Confidence 4 23333 556788888888899999999888888764
No 92
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.15 E-value=1.6e-05 Score=60.27 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=74.5
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.+..+...|++++|+..+++++... |.+ ..+...++.++...|++++|+.++++++... +. .....
T Consensus 12 ~~~~~~~~~~~~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~-----~~-~~~~~ 77 (112)
T 2kck_A 12 EGVLQYDAGNYTESIDLFEKAIQLD-----PEE---SKYWLMKGKALYNLERYEEAVDCYNYVINVI-----ED-EYNKD 77 (112)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTS-----CC-TTCHH
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----cc-cchHH
Confidence 3445668899999999999887652 333 4567789999999999999999999988642 22 11345
Q ss_pred HHhhhhhHhhhc-CChHHHHHHHHHHHHh
Q 017649 306 QYYTCGKLEWFL-GDTENAIKSMTEAVEI 333 (368)
Q Consensus 306 ~l~~La~l~~~~-g~~~eA~~~l~kAl~i 333 (368)
.++.+|.++..+ |++++|+.++++++..
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 78 VWAAKADALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhhc
Confidence 688999999999 9999999999998763
No 93
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.15 E-value=7.9e-05 Score=70.00 Aligned_cols=126 Identities=13% Similarity=0.060 Sum_probs=98.7
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCcc-ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h-~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
...+......|++++|...+++++... ++.+ .....+...++.++...|++++|.+++++++...+.. ++...
T Consensus 18 ~~~a~~~~~~g~~~~A~~~~~~al~~~----~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~--~~~~~ 91 (373)
T 1hz4_A 18 ALRAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH--DVWHY 91 (373)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTC----CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--TCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHcC----CCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhc--CcHHH
Confidence 334555668899999999999887643 2222 2345677889999999999999999999999988763 23345
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEA 355 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~ 355 (368)
.+..+..+|.++..+|++++|+.++++|+++.....++.+|........+..+
T Consensus 92 ~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~ 144 (373)
T 1hz4_A 92 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQL 144 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHH
Confidence 57788999999999999999999999999999988777777666555555444
No 94
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.14 E-value=3.5e-05 Score=71.74 Aligned_cols=122 Identities=17% Similarity=0.174 Sum_probs=92.6
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++.. +|.
T Consensus 220 ~~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~~~ 283 (368)
T 1fch_A 220 QCGLGVLFNLSGEYDKAVDCFTAALSV-----RPND---YLLWNKLGATLANGNQSEEAVAAYRRALEL--------QPG 283 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CcCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCC
Confidence 344566677889999999999988765 2333 456788999999999999999999999875 234
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC---CchHHHHHHHHHHHHHHHh
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN---SPFMKELILKLEEAQAEAS 360 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~---hp~~~~l~~~L~~~~~el~ 360 (368)
....++.+|.++..+|++++|+.++++|+.+.....|+. ++....+...|..+...+.
T Consensus 284 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 344 (368)
T 1fch_A 284 YIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGEGGAMSENIWSTLRLALSMLG 344 (368)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------CCCCCHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCccccccchhhHHHHHHHHHHHHhC
Confidence 456789999999999999999999999999877664443 4555566666666655443
No 95
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=98.12 E-value=6.1e-06 Score=68.04 Aligned_cols=94 Identities=14% Similarity=0.048 Sum_probs=71.7
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhh
Q 017649 230 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 309 (368)
Q Consensus 230 ~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~ 309 (368)
+.++|++++|+..++++.. .++.-......|+.+|...|+|++|+++++++++.- |.+ ...++.
T Consensus 7 ~~~~~~~e~ai~~~~~a~~--------~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~-----p~~---~~a~~~ 70 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTP--------SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQ-----ERD---PKAHRF 70 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSC--------SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHH
T ss_pred HHHcChHHHHHHHHHHhcc--------cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC---HHHHHH
Confidence 3455677777777766532 233334455689999999999999999999999752 344 467899
Q ss_pred hhhHhhhcCChHHHHHHHHHHHHhhccccCCCCch
Q 017649 310 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 344 (368)
Q Consensus 310 La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~ 344 (368)
+|.++..+|++++|+..+++|+++ .|+++.
T Consensus 71 lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~ 100 (150)
T 4ga2_A 71 LGLLYELEENTDKAVECYRRSVEL-----NPTQKD 100 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH
T ss_pred HHHHHHHcCchHHHHHHHHHHHHh-----CCCCHH
Confidence 999999999999999999999985 455553
No 96
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.11 E-value=7.2e-05 Score=65.17 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=79.4
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh-
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP- 301 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp- 301 (368)
....+..+...|++++|+..+++++.. ++....++..++.+|..+|++++|+.++++++... | .++
T Consensus 45 ~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~----p-~~~~ 111 (228)
T 4i17_A 45 AYNCGVCADNIKKYKEAADYFDIAIKK--------NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV----P-GNAT 111 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHT--------TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS----T-TCHH
T ss_pred HHHHHHHHHHhhcHHHHHHHHHHHHHh--------CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC----C-CcHH
Confidence 344566677889999999999888753 23355678889999999999999999999998643 3 333
Q ss_pred ---HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 302 ---LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 302 ---~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.++..++.+|.++..+|++++|+..+++|+++
T Consensus 112 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 112 IEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc
Confidence 34567899999999999999999999999985
No 97
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.10 E-value=7.3e-05 Score=62.45 Aligned_cols=115 Identities=7% Similarity=0.026 Sum_probs=88.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHH-HHhhhhH--HHHHHHHHhhhhhHHhhcCC
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKI-LMELEDW--KEALAYCQLTIPVYQRVYPQ 298 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~-~~~~g~~--~~Al~~~~~~l~~~e~~~g~ 298 (368)
.....+..+...|++++|+..+++++.+. |.+ ..+...++.+ +...|++ ++|+.++++++.. .|
T Consensus 46 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p~~---~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~-----~p 112 (177)
T 2e2e_A 46 QWALLGEYYLWQNDYSNSLLAYRQALQLR-----GEN---AELYAALATVLYYQASQHMTAQTRAMIDKALAL-----DS 112 (177)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----CSC---HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHH-----CT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC---HHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHh-----CC
Confidence 44556667788999999999999988653 333 3456788888 8889998 9999999998874 23
Q ss_pred CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 299 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 299 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
.++ ..++.+|.++...|++++|+.++++|+++ .|+++....+...+..+..
T Consensus 113 ~~~---~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~~~~~i~~~~~ 163 (177)
T 2e2e_A 113 NEI---TALMLLASDAFMQANYAQAIELWQKVMDL-----NSPRINRTQLVESINMAKL 163 (177)
T ss_dssp TCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----CCTTSCHHHHHHHHHHHHH
T ss_pred CcH---HHHHHHHHHHHHcccHHHHHHHHHHHHhh-----CCCCccHHHHHHHHHHHHH
Confidence 333 56789999999999999999999999874 4555666677777666544
No 98
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.10 E-value=4.2e-05 Score=67.06 Aligned_cols=105 Identities=10% Similarity=0.080 Sum_probs=88.6
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
...+...+..+...|++++|+..+++++... .+ ..++..++.++...|++++|+.++++++...... ++.
T Consensus 5 a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~------~~---~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~ 74 (258)
T 3uq3_A 5 ADKEKAEGNKFYKARQFDEAIEHYNKAWELH------KD---ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREM-RAD 74 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS------CC---THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHhh------cc---HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCccc-ccc
Confidence 4556677778889999999999999988753 12 3567789999999999999999999999876543 456
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
++..+..++.+|.++...|++++|+.++++++.+.
T Consensus 75 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 109 (258)
T 3uq3_A 75 YKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEH 109 (258)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC
Confidence 77778999999999999999999999999999853
No 99
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.09 E-value=5.3e-05 Score=66.39 Aligned_cols=115 Identities=14% Similarity=0.086 Sum_probs=87.6
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++... |.+ ..+...++.++...|++++|+.++++++... |.
T Consensus 141 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~-----~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-----~~-- 205 (258)
T 3uq3_A 141 EARLEGKEYFTKSDWPNAVKAYTEMIKRA-----PED---ARGYSNRAAALAKLMSFPEAIADCNKAIEKD-----PN-- 205 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT--
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----ccc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-----HH--
Confidence 34456667778899999999999987652 333 4567889999999999999999999998742 33
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 354 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~ 354 (368)
....++.+|.++..+|++++|+.++++|+++..... +.|...++...|..
T Consensus 206 -~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~~p~~~~~~~~l~~ 255 (258)
T 3uq3_A 206 -FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVN--NGSSAREIDQLYYK 255 (258)
T ss_dssp -CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH--TTTTHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhc--CCCchHHHHHHHHH
Confidence 346688999999999999999999999999864432 33444455555443
No 100
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.08 E-value=1.6e-05 Score=74.84 Aligned_cols=119 Identities=13% Similarity=0.151 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCcccc--------------HHHHHHHHHHHHHhhhhHHHH
Q 017649 216 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN--------------LMQTREKLIKILMELEDWKEA 281 (368)
Q Consensus 216 ~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~--------------l~~~~~~La~~~~~~g~~~~A 281 (368)
.......+...+..+...|++++|+..|++++... |.+.. ...++.+++.+|..+|+|++|
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~-----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A 249 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM-----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEA 249 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS-----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh-----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 34455667788888999999999999999988753 11110 113778999999999999999
Q ss_pred HHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHH
Q 017649 282 LAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 352 (368)
Q Consensus 282 l~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L 352 (368)
+.++.+++.. +|.-...++++|.++..+|++++|+..|++|+.+ .|+++.....+..+
T Consensus 250 ~~~~~~al~~--------~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l-----~p~~~~a~~~L~~l 307 (338)
T 2if4_A 250 IGHCNIVLTE--------EEKNPKALFRRGKAKAELGQMDSARDDFRKAQKY-----APDDKAIRRELRAL 307 (338)
T ss_dssp HHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC--------------------
T ss_pred HHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCCHHHHHHHHHH
Confidence 9999999874 2333567899999999999999999999999865 35555544443333
No 101
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.08 E-value=3e-05 Score=67.80 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=81.4
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++... |.+
T Consensus 8 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-----P~~-- 72 (217)
T 2pl2_A 8 PLRLGVQLYALGRYDAALTLFERALKE-----NPQD---PEALYWLARTQLKLGLVNPALENGKTLVART-----PRY-- 72 (217)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTT-----SSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC--
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCc--
Confidence 445566778899999999999988753 3443 5567889999999999999999999998742 333
Q ss_pred HHHHHhhhhhHhhhc-----------CChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 303 LGLQYYTCGKLEWFL-----------GDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 303 ~~~~l~~La~l~~~~-----------g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
...++.+|.++..+ |++++|+..+++|+++ .|+++..
T Consensus 73 -~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~P~~~~~ 120 (217)
T 2pl2_A 73 -LGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERV-----NPRYAPL 120 (217)
T ss_dssp -HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred -HHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHh-----CcccHHH
Confidence 45678999999999 9999999999999986 4555543
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=98.08 E-value=9e-05 Score=64.94 Aligned_cols=123 Identities=9% Similarity=-0.010 Sum_probs=91.2
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh------------------hhhHHHHHH
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME------------------LEDWKEALA 283 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~------------------~g~~~~Al~ 283 (368)
.....+..+...|++++|+..++++++. .|.++....++..++.++.. +|++++|+.
T Consensus 43 a~~~lg~~~~~~~~~~~A~~~~~~~l~~-----~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 117 (225)
T 2yhc_A 43 VQLDLIYAYYKNADLPLAQAAIDRFIRL-----NPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFS 117 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH-----CcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHH
Confidence 4556677788899999999999998764 56777766677777777764 579999999
Q ss_pred HHHhhhhhHHhhcCCCChHHH--------------HHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHH
Q 017649 284 YCQLTIPVYQRVYPQFHPLLG--------------LQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELI 349 (368)
Q Consensus 284 ~~~~~l~~~e~~~g~~hp~~~--------------~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~ 349 (368)
.+++++..+ |+++... ...+.+|.++...|++.+|+..++++++.. |++|...+..
T Consensus 118 ~~~~~l~~~-----P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-----p~~~~~~~a~ 187 (225)
T 2yhc_A 118 DFSKLVRGY-----PNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY-----PDTQATRDAL 187 (225)
T ss_dssp HHHHHHTTC-----TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTSHHHHHHH
T ss_pred HHHHHHHHC-----cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC-----cCCCccHHHH
Confidence 999888643 3444322 222577889999999999999999999864 5566666666
Q ss_pred HHHHHHHHHH
Q 017649 350 LKLEEAQAEA 359 (368)
Q Consensus 350 ~~L~~~~~el 359 (368)
..+..+..++
T Consensus 188 ~~l~~~~~~~ 197 (225)
T 2yhc_A 188 PLMENAYRQM 197 (225)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 6666665443
No 103
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.06 E-value=2.9e-05 Score=66.70 Aligned_cols=105 Identities=11% Similarity=-0.024 Sum_probs=83.3
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhc-----
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY----- 296 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~----- 296 (368)
.....+..+...|++++|+..+++++.+. |. ...++.+++.++..+|++++|++++++++......-
T Consensus 39 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 110 (213)
T 1hh8_A 39 ICFNIGCMYTILKNMTEAEKAFTRSINRD-----KH---LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYK 110 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECG
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----cc---chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHH
Confidence 34556667778999999999999987652 33 346778999999999999999999999887532110
Q ss_pred --C-CCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 297 --P-QFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 297 --g-~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
| ..+|.....++++|.++..+|++++|+..+++|+.+.
T Consensus 111 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 111 ILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp GGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 0 1456667889999999999999999999999999754
No 104
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.03 E-value=0.00013 Score=62.38 Aligned_cols=94 Identities=11% Similarity=0.042 Sum_probs=58.2
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh-hhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-EDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~-g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
.+..+...|++++|+..+++++.. .|.+ ..+...++.++... |++++|+.++++++. .+.+|...
T Consensus 48 l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~ 113 (225)
T 2vq2_A 48 RAEIYQYLKVNDKAQESFRQALSI-----KPDS---AEINNNYGWFLCGRLNRPAESMAYFDKALA------DPTYPTPY 113 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchH
Confidence 344455666666666666666543 1222 33455666777777 777777777666665 23445555
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..++.+|.++...|++++|+.++.++++.
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 142 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAA 142 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 66667777777777777777777777653
No 105
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.03 E-value=1.6e-05 Score=74.08 Aligned_cols=112 Identities=15% Similarity=0.129 Sum_probs=91.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcC---C
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP---Q 298 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g---~ 298 (368)
.....+..+...|++++|+..+++++.+ .|. ...++..++.+|...|++++|+.++++++.......+ .
T Consensus 253 ~~~~l~~~~~~~g~~~~A~~~~~~al~~-----~~~---~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 324 (368)
T 1fch_A 253 LWNKLGATLANGNQSEEAVAAYRRALEL-----QPG---YIRSRYNLGISCINLGAHREAVEHFLEALNMQRKSRGPRGE 324 (368)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCC---cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCcccc
Confidence 3455666777889999999999998765 233 3466788999999999999999999999988765533 3
Q ss_pred CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC
Q 017649 299 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 341 (368)
Q Consensus 299 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~ 341 (368)
.++.....+..+|.++..+|++++|...+.++++++...+|.+
T Consensus 325 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~ 367 (368)
T 1fch_A 325 GGAMSENIWSTLRLALSMLGQSDAYGAADARDLSTLLTMFGLP 367 (368)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCGGGHHHHHTTCHHHHHHHTTCC
T ss_pred ccchhhHHHHHHHHHHHHhCChHhHHHhHHHHHHHHHHhcCCC
Confidence 4566678899999999999999999999999999999888764
No 106
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=98.03 E-value=2.8e-05 Score=62.12 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=66.2
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccC
Q 017649 260 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 339 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G 339 (368)
..+.+..+|+.++...|+|++|++++.+++++ +|..+..++++|.++..+|++++|+..+++|+++-.. ..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~--------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~-~~ 76 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL--------DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRE-TR 76 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcc-cc
Confidence 34566778999999999999999999999975 3444567899999999999999999999999987543 33
Q ss_pred CCCchHHHHHHHHHH
Q 017649 340 TNSPFMKELILKLEE 354 (368)
Q Consensus 340 ~~hp~~~~l~~~L~~ 354 (368)
+.++....+...+..
T Consensus 77 ~~~~~~a~~~~~lg~ 91 (127)
T 4gcn_A 77 ADYKLIAKAMSRAGN 91 (127)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHH
Confidence 444444444444433
No 107
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.02 E-value=4.2e-05 Score=66.68 Aligned_cols=98 Identities=16% Similarity=0.117 Sum_probs=79.8
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.+...+..+...|++++|+..+++++.+.. +.+. .+...++.++..+|++++|+.++++++.. +|
T Consensus 9 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~----~~~~---~~~~~~~~~~~~~~~~~~A~~~~~~al~~--------~p 73 (228)
T 4i17_A 9 QLKNEGNDALNAKNYAVAFEKYSEYLKLTN----NQDS---VTAYNCGVCADNIKKYKEAADYFDIAIKK--------NY 73 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTT----TCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHT--------TC
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhccC----CCCc---HHHHHHHHHHHHhhcHHHHHHHHHHHHHh--------Cc
Confidence 456677778899999999999999887531 1232 45666999999999999999999999852 34
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
.....++.+|.++..+|++++|+..+++|+++.
T Consensus 74 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 106 (228)
T 4i17_A 74 NLANAYIGKSAAYRDMKNNQEYIATLTEGIKAV 106 (228)
T ss_dssp SHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC
Confidence 455678999999999999999999999999753
No 108
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.01 E-value=8.2e-05 Score=65.42 Aligned_cols=62 Identities=11% Similarity=0.084 Sum_probs=28.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
...++.++...|++++|++++++++. .+.+|.....++.+|.++...|++++|+.+++++++
T Consensus 108 ~~~la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~ 169 (252)
T 2ho1_A 108 LNNYGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLR 169 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 33444444444444444444444443 123333344444455555555555555555555544
No 109
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.00 E-value=5.5e-05 Score=58.62 Aligned_cols=103 Identities=19% Similarity=0.172 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhc
Q 017649 238 EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL 317 (368)
Q Consensus 238 eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~ 317 (368)
+|+..+++++. ..|.+ ..++..++.+|...|++++|+.++++++... |.....++.+|.++..+
T Consensus 3 ~a~~~~~~al~-----~~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~la~~~~~~ 66 (115)
T 2kat_A 3 AITERLEAMLA-----QGTDN---MLLRFTLGKTYAEHEQFDAALPHLRAALDFD--------PTYSVAWKWLGKTLQGQ 66 (115)
T ss_dssp CHHHHHHHHHT-----TTCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-----hCCCc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHHC--------CCcHHHHHHHHHHHHHc
Confidence 35555665543 23443 4567889999999999999999999998742 23345678999999999
Q ss_pred CChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 318 GDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 318 g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
|++++|+..+++|+++.... | +.....++...+..+...
T Consensus 67 g~~~~A~~~~~~al~~~~~~-~-~~~~~~~l~~~l~~l~~~ 105 (115)
T 2kat_A 67 GDRAGARQAWESGLAAAQSR-G-DQQVVKELQVFLRRLARE 105 (115)
T ss_dssp TCHHHHHHHHHHHHHHHHHH-T-CHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcccc-c-cHHHHHHHHHHHHHhccc
Confidence 99999999999999875432 1 122334455555555443
No 110
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.00 E-value=1.7e-05 Score=74.16 Aligned_cols=113 Identities=12% Similarity=0.125 Sum_probs=90.5
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.+ +|.+ ..++.+++.+|..+|++++|+.++++++.......++.++
T Consensus 249 ~~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 320 (365)
T 4eqf_A 249 LWNRLGATLANGDRSEEAVEAYTRALEI-----QPGF---IRSRYNLGISCINLGAYREAVSNFLTALSLQRKSRNQQQV 320 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCc---hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccCCCccc
Confidence 3445666777889999999999998775 3333 5678899999999999999999999999999887776655
Q ss_pred HH----HHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCC
Q 017649 302 LL----GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 342 (368)
Q Consensus 302 ~~----~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~h 342 (368)
.. +..+..|+.++..+|+.+.|.....+++++++..+|.++
T Consensus 321 ~~~~~~~~~~~~l~~~~~~~g~~~~a~~~~~~~l~~~~~~~~~~~ 365 (365)
T 4eqf_A 321 PHPAISGNIWAALRIALSLMDQPELFQAANLGDLDVLLRAFNLDP 365 (365)
T ss_dssp ------CHHHHHHHHHHHHHTCHHHHHHHHTTCCGGGTTTTTCC-
T ss_pred chhhhHHHHHHHHHHHHHHcCcHHHHHHHHHhhHHHHHHhcCCCC
Confidence 44 677889999999999999999999999999999999764
No 111
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=97.99 E-value=0.00014 Score=63.96 Aligned_cols=93 Identities=9% Similarity=-0.046 Sum_probs=59.8
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.+..+...|++++|+..+++++. .+.++....+...++.++...|++++|+.++++++.. .+.+ ..
T Consensus 111 la~~~~~~g~~~~A~~~~~~~~~------~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~-----~~~~---~~ 176 (252)
T 2ho1_A 111 YGGFLYEQKRYEEAYQRLLEASQ------DTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRL-----NRNQ---PS 176 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTT------CTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSCC---HH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHh------CccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----Cccc---HH
Confidence 34445566677777666665543 1234444556677777777777777777777776653 1223 34
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
.+..+|.++..+|++++|+.+++++++
T Consensus 177 ~~~~la~~~~~~g~~~~A~~~~~~~~~ 203 (252)
T 2ho1_A 177 VALEMADLLYKEREYVPARQYYDLFAQ 203 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 556777777777777777777777765
No 112
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.99 E-value=6.1e-05 Score=66.88 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=79.2
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.. .|. ...++..++.++...|++++|++++++++... |.+
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~---~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-----~~~ 110 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAI-----RPD---MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELD-----PTY 110 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCC---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHc-----CCC---cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-----ccc
Confidence 34455677778899999999999998875 333 34567889999999999999999999998752 223
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...++.+|.++...|++++|+..+++++++
T Consensus 111 ---~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 111 ---NYAHLNRGIALYYGGRDKLAQDDLLAFYQD 140 (275)
T ss_dssp ---THHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ---cHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 467889999999999999999999999874
No 113
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.94 E-value=0.00012 Score=56.81 Aligned_cols=93 Identities=23% Similarity=0.309 Sum_probs=69.2
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
..+..+...|++++|+..+++++.. +|.+ ..+...++.++...|++++|+.++++++.. .+.+ .
T Consensus 6 ~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~ 69 (136)
T 2fo7_A 6 NLGNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPRS---A 69 (136)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---H
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHc-----CCcc---hhHHHHHHHHHHHhcCHHHHHHHHHHHHHH-----CCCc---h
Confidence 3445566778899999888887654 2322 345667888888899999999988887753 2233 3
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..++.+|.++...|++++|+.++.+++.+
T Consensus 70 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 70 EAWYNLGNAYYKQGDYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 45678888999999999999999998875
No 114
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.94 E-value=0.0001 Score=67.05 Aligned_cols=102 Identities=10% Similarity=0.036 Sum_probs=82.8
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC-hH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH-PL 302 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h-p~ 302 (368)
...+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.......+... |.
T Consensus 163 ~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 234 (330)
T 3hym_B 163 LYIGLEYGLTNNSKLAERFFSQALSI-----APED---PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDK 234 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTT-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHh-----CCCC---hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccH
Confidence 33556677889999999999888654 2333 456778999999999999999999999998876655433 45
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
....+..+|.++...|++++|+.++++|+++
T Consensus 235 ~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 235 WEPLLNNLGHVCRKLKKYAEALDYHRQALVL 265 (330)
T ss_dssp CCHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 5678889999999999999999999999986
No 115
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=97.94 E-value=0.00021 Score=61.09 Aligned_cols=94 Identities=9% Similarity=-0.029 Sum_probs=72.2
Q ss_pred HHHHhhhc-CChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 226 KTLALTSC-GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 226 ~a~~~~~~-g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
.+..+... |++++|+..+++++. .+.++....+...++.++...|++++|+.++++++.. .+.+ .
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~ 147 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALA------DPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAA-----QPQF---P 147 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHT------STTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---H
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHc------CcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---c
Confidence 45556677 889998888887764 2445556677888899999999999999988888763 2233 3
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..+..+|.++...|++++|+.++++++.+
T Consensus 148 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 148 PAFKELARTKMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 56778898999999999999999998874
No 116
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.93 E-value=6.7e-05 Score=64.35 Aligned_cols=95 Identities=17% Similarity=0.156 Sum_probs=77.9
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
...+..+..+...|++++|+..++++ +.+ + ..+..+++.++...|++++|+.++++++...
T Consensus 7 ~~~~~~g~~~~~~~~~~~A~~~~~~a-------~~~-~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-------- 67 (213)
T 1hh8_A 7 ISLWNEGVLAADKKDWKGALDAFSAV-------QDP-H---SRICFNIGCMYTILKNMTEAEKAFTRSINRD-------- 67 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTS-------SSC-C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHH-------cCC-C---hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------
Confidence 34566777788899999999988765 222 2 4578899999999999999999999998752
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
|.....++++|.++..+|++++|+..+++|+++.
T Consensus 68 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 68 KHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred ccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 3334678999999999999999999999999864
No 117
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.93 E-value=6.1e-05 Score=66.96 Aligned_cols=98 Identities=15% Similarity=0.050 Sum_probs=68.9
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
+...|..+...|++++|+..+++++.. .|.+.. +...++.++...|++++|++++++++. .|.+...
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~-----~p~~~~---~~~~l~~~~~~~~~~~~A~~~~~~a~~-----~~~~~~~ 72 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAK-----KYNSPY---IYNRRAVCYYELAKYDLAQKDIETYFS-----KVNATKA 72 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHT-----TCCCST---THHHHHHHHHHTTCHHHHHHHHHHHHT-----TSCTTTC
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCcHH---HHHHHHHHHHHHhhHHHHHHHHHHHHh-----ccCchhH
Confidence 445566677788888888888877653 333332 355677788888888888888887776 2333333
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.+..+..+|.++...|++++|+.++++|+++
T Consensus 73 ~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~ 103 (272)
T 3u4t_A 73 KSADFEYYGKILMKKGQDSLAIQQYQAAVDR 103 (272)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 4666778888888888888888888888874
No 118
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.92 E-value=0.00024 Score=58.48 Aligned_cols=94 Identities=13% Similarity=0.041 Sum_probs=71.2
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
...+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|++++++++.. .+.+
T Consensus 46 ~~~~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~--- 109 (186)
T 3as5_A 46 LHLGIAYVKTGAVDRGTELLERSLAD-----APDN---VKVATVLGLTYVQVQKYDLAVPLLIKVAEA-----NPIN--- 109 (186)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CcHh---
Confidence 34455566788999999988887764 2332 355677888899999999999998888764 2223
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+..+|.++...|++++|+.++++++..
T Consensus 110 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 110 FNVRFRLGVALDNLGRFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHhc
Confidence 356788899999999999999999998875
No 119
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.91 E-value=0.00016 Score=66.39 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=81.0
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
++.....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .|.
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~ 69 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVDG-----DPDN---YIAYYRRATVFLAMGKSKAALPDLTKVIAL-----KMD 69 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----Cccc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh-----CCC
Confidence 345666777888999999999999998764 3333 456788999999999999999999999875 233
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+ ...++.+|.++...|++++|+..+++++.+
T Consensus 70 ~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 100 (359)
T 3ieg_A 70 F---TAARLQRGHLLLKQGKLDEAEDDFKKVLKS 100 (359)
T ss_dssp C---HHHHHHHHHHHHHHTCHHHHHHHHHHHHTS
T ss_pred c---chHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 3 366889999999999999999999999875
No 120
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.91 E-value=0.00025 Score=67.89 Aligned_cols=111 Identities=17% Similarity=0.161 Sum_probs=87.1
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCcccc-HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~-l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
...+..+...|++++|+..+++++.. .|.++. ...++..++.++...|++++|+.++++++.. +|.
T Consensus 261 ~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~--------~p~ 327 (450)
T 2y4t_A 261 IESAEELIRDGRYTDATSKYESVMKT-----EPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQM--------EPD 327 (450)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH--------CTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhc-----CCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--------Ccc
Confidence 44577778889999999999998764 344443 3567888999999999999999999998865 233
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKL 352 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L 352 (368)
....++.+|.++...|++++|+..+++|+++ .|+++.....+..+
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~~~~l~~~ 372 (450)
T 2y4t_A 328 NVNALKDRAEAYLIEEMYDEAIQDYETAQEH-----NENDQQIREGLEKA 372 (450)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT-----SSSCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CcchHHHHHHHHHH
Confidence 4467889999999999999999999999973 56666555444433
No 121
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.91 E-value=0.00015 Score=56.11 Aligned_cols=94 Identities=22% Similarity=0.299 Sum_probs=73.7
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
...+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .+.+
T Consensus 39 ~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~--- 102 (136)
T 2fo7_A 39 YNLGNAYYKQGDYDEAIEYYQKALEL-----DPRS---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPRS--- 102 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTC---
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHH-----CCCc---hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCCC---
Confidence 33455566788999999999887754 2333 345678999999999999999999988864 2233
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+..+|.++...|++++|+.++.+++.+
T Consensus 103 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 103 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 345678999999999999999999999875
No 122
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.86 E-value=0.00015 Score=71.48 Aligned_cols=105 Identities=12% Similarity=0.048 Sum_probs=82.9
Q ss_pred HHHHHHHhhhc---------CChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh--------hhHHHHHHHH
Q 017649 223 LSKKTLALTSC---------GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL--------EDWKEALAYC 285 (368)
Q Consensus 223 l~~~a~~~~~~---------g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~--------g~~~~Al~~~ 285 (368)
....+..+... |++++|+..+++++.+ .|.+ ..++..++.+|..+ |++++|++++
T Consensus 173 ~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~ 244 (474)
T 4abn_A 173 LQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM-----DVLD---GRSWYILGNAYLSLYFNTGQNPKISQQALSAY 244 (474)
T ss_dssp HHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 34455556666 8999999999998875 3433 45678899999999 9999999999
Q ss_pred HhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 286 QLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 286 ~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
++++... |.++.....++++|.++..+|++++|+..+++|+++ .|+++..
T Consensus 245 ~~al~~~-----p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~~~~a 294 (474)
T 4abn_A 245 AQAEKVD-----RKASSNPDLHLNRATLHKYEESYGEALEGFSQAAAL-----DPAWPEP 294 (474)
T ss_dssp HHHHHHC-----GGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred HHHHHhC-----CCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 9999762 223366788999999999999999999999999985 3555533
No 123
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=97.86 E-value=9.2e-05 Score=67.40 Aligned_cols=113 Identities=14% Similarity=0.185 Sum_probs=86.4
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCcc-ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFS-VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h-~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
.....+..+...|++++|+..+++++......-.+.. +....+...++.++...|++++|+.++++++... +.
T Consensus 195 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~-----~~- 268 (330)
T 3hym_B 195 VMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI-----PQ- 268 (330)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TT-
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC-----cc-
Confidence 3445666777889999999999999887644333222 3334577889999999999999999999998752 23
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 347 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~ 347 (368)
....+..+|.++..+|++++|+.++++|+++ .|+++....
T Consensus 269 --~~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p~~~~~~~ 308 (330)
T 3hym_B 269 --NASTYSAIGYIHSLMGNFENAVDYFHTALGL-----RRDDTFSVT 308 (330)
T ss_dssp --CSHHHHHHHHHHHHHTCHHHHHHHHHTTTTT-----CSCCHHHHH
T ss_pred --chHHHHHHHHHHHHhccHHHHHHHHHHHHcc-----CCCchHHHH
Confidence 3456789999999999999999999999864 456654433
No 124
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.86 E-value=0.00026 Score=61.27 Aligned_cols=115 Identities=17% Similarity=0.135 Sum_probs=80.5
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH---
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL--- 302 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~--- 302 (368)
.+..+...|++++|+..+++++.+ .|.+ ..++..++.++...|++++|+.++++++... |.++.
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----P~~~~a~~ 126 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQK-----APNN---VDCLEACAEMQVCRGQEKDALRMYEKILQLE-----ADNLAANI 126 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----TTCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCCHHHHH
Confidence 667778899999999999998875 3444 4567889999999999999999999988642 23332
Q ss_pred -HHH----------------------------HHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHH
Q 017649 303 -LGL----------------------------QYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 353 (368)
Q Consensus 303 -~~~----------------------------~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~ 353 (368)
+|. .++.+|..+..+|++++|+..|++|+++. |++ .....+..+.
T Consensus 127 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~-----P~~-~~~~~l~~i~ 200 (208)
T 3urz_A 127 FLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF-----PST-EAQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS-----CCH-HHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-----CCH-HHHHHHHHHH
Confidence 122 22334555556778889999999998753 332 3444555555
Q ss_pred HHHHHH
Q 017649 354 EAQAEA 359 (368)
Q Consensus 354 ~~~~el 359 (368)
+++.++
T Consensus 201 ~~~~~~ 206 (208)
T 3urz_A 201 RIEKEV 206 (208)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555544
No 125
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.85 E-value=0.00018 Score=65.99 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=82.3
Q ss_pred hcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhh
Q 017649 232 SCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 311 (368)
Q Consensus 232 ~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La 311 (368)
..|++++|...+++++.. .|.+ ..++.+++.++..+|+|++|..++++++.. .|++|.. ++++|
T Consensus 178 ~~~~~~eA~~~~~~~l~~-----~p~~---~~~~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~~---l~~l~ 241 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADK-----CSPT---LLLLNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPET---LINLV 241 (291)
T ss_dssp CTTHHHHHHHHHHHHHHH-----SCCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH---HHHHH
T ss_pred CchHHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH---HHHHH
Confidence 457899999999888764 3443 456788999999999999999999999864 3566654 78999
Q ss_pred hHhhhcCChHH-HHHHHHHHHHhhccccCCCCchHHHHHHHHHHH
Q 017649 312 KLEWFLGDTEN-AIKSMTEAVEILRITHGTNSPFMKELILKLEEA 355 (368)
Q Consensus 312 ~l~~~~g~~~e-A~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~ 355 (368)
.++..+|+..+ +..+++++++ ..|+||.+.++..+-..-
T Consensus 242 ~~~~~~g~~~eaa~~~~~~~~~-----~~P~~~~~~d~~~~~~~f 281 (291)
T 3mkr_A 242 VLSQHLGKPPEVTNRYLSQLKD-----AHRSHPFIKEYRAKENDF 281 (291)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH-----HCTTCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHHHHH-----hCCCChHHHHHHHHHHHH
Confidence 99999999976 5688888875 479999999987765444
No 126
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=97.85 E-value=1.3e-05 Score=66.70 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=37.8
Q ss_pred ccccccCCCcc---CcEEEEeCCEEEEEEccCCCCCCeeEEeccCCCCC
Q 017649 95 VISIINHSCLP---NAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGS 140 (368)
Q Consensus 95 ~~s~~nHsC~P---N~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~~~ 140 (368)
.+.++||+|.| |+...-.++++.++|+|+|++||||++.|++.++.
T Consensus 97 WmR~Vn~A~~~~eqNl~a~q~~~~I~~~a~rdI~pGeELlv~Yg~~y~~ 145 (151)
T 3db5_A 97 WMMFVRKARNREEQNLVAYPHDGKIFFCTSQDIPPENELLFYYSRDYAQ 145 (151)
T ss_dssp GGGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC----
T ss_pred ceeEEEecCCcccCceEEEEECCEEEEEEccccCCCCEEEEecCHHHHH
Confidence 34688999965 99887788999999999999999999999988753
No 127
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.85 E-value=9.5e-05 Score=58.94 Aligned_cols=68 Identities=12% Similarity=0.104 Sum_probs=59.7
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+|.......+++..|...|+|++|++++.++++. .|.-...++++|.++..+|++++|+..+++|+++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR--------DPENAILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 6778888999999999999999999999999864 2333467899999999999999999999999985
No 128
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.83 E-value=0.00016 Score=68.23 Aligned_cols=91 Identities=20% Similarity=0.210 Sum_probs=52.7
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+++++++++. +|....
T Consensus 277 l~~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~ 340 (388)
T 1w3b_A 277 LANALKEKGSVAEAEDCYNTALRL-----CPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEV--------FPEFAA 340 (388)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHHTTS--------CTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhh-----Cccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--------CCCcHH
Confidence 333444555666666665555443 2222 234455666666666666666666665542 233345
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
.++.+|.++...|++++|+..+++|++
T Consensus 341 ~~~~l~~~~~~~g~~~~A~~~~~~a~~ 367 (388)
T 1w3b_A 341 AHSNLASVLQQQGKLQEALMHYKEAIR 367 (388)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 566777777777777777777777765
No 129
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.83 E-value=0.00036 Score=63.29 Aligned_cols=99 Identities=14% Similarity=0.012 Sum_probs=79.4
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++... +.+
T Consensus 175 ~~~la~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~-- 239 (327)
T 3cv0_A 175 HASLGVLYNLSNNYDSAAANLRRAVEL-----RPDD---AQLWNKLGATLANGNRPQEALDAYNRALDIN-----PGY-- 239 (327)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC--
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCC--
Confidence 444566677889999999999988764 2333 4567789999999999999999999988742 233
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
...++.+|.++..+|++++|+.++++|+.+....
T Consensus 240 -~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 273 (327)
T 3cv0_A 240 -VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGG 273 (327)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTS
T ss_pred -HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 4567899999999999999999999999876553
No 130
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.83 E-value=0.00015 Score=72.76 Aligned_cols=96 Identities=17% Similarity=-0.011 Sum_probs=78.5
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|++.+++++++ .|.+ ..++.+++.+|..+|++++|+++++++++.. +.+
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~- 90 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLAL-----HPGH---PEAVARLGRVRWTQQRHAEAAVLLQQASDAA-----PEH- 90 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTT-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC-
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-----CCC-
Confidence 3445566677889999999999988764 3433 5567889999999999999999999998742 333
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...++++|.++..+|++++|+..+++|+++
T Consensus 91 --~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 91 --PGIALWLGHALEDAGQAEAAAAAYTRAHQL 120 (568)
T ss_dssp --HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 457889999999999999999999999986
No 131
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=97.81 E-value=0.00019 Score=59.08 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=76.9
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|.+.+++++.. .|.+ ..+...++.++...|++++|++++++++... +.+
T Consensus 79 ~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~-- 143 (186)
T 3as5_A 79 ATVLGLTYVQVQKYDLAVPLLIKVAEA-----NPIN---FNVRFRLGVALDNLGRFDEAIDSFKIALGLR-----PNE-- 143 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC--
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHhc-----CcHh---HHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-----ccc--
Confidence 344566677889999999999988765 2333 3567789999999999999999999988642 233
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
...+..+|.++...|++++|..++++++++.
T Consensus 144 -~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 174 (186)
T 3as5_A 144 -GKVHRAIAFSYEQMGRHEEALPHFKKANELD 174 (186)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 4667899999999999999999999998764
No 132
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.81 E-value=0.00015 Score=63.03 Aligned_cols=89 Identities=15% Similarity=0.127 Sum_probs=42.4
Q ss_pred HHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHH
Q 017649 228 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 307 (368)
Q Consensus 228 ~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l 307 (368)
..+...|++++|+..+++++... |.+ ..+...++.++...|++++|+.++++++.. .+.+ ...+
T Consensus 133 ~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~ 196 (243)
T 2q7f_A 133 TVLVKLEQPKLALPYLQRAVELN-----END---TEARFQFGMCLANEGMLDEALSQFAAVTEQ-----DPGH---ADAF 196 (243)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH-----CTTC---HHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhC-----Ccc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---HHHH
Confidence 33444455555555555544321 111 223444555555555555555555554432 1122 2234
Q ss_pred hhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 308 YTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 308 ~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
..+|.++..+|++++|+.+++++++
T Consensus 197 ~~la~~~~~~~~~~~A~~~~~~~~~ 221 (243)
T 2q7f_A 197 YNAGVTYAYKENREKALEMLDKAID 221 (243)
T ss_dssp HHHHHHHHHTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHc
Confidence 5555555555555555555555554
No 133
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=97.80 E-value=5.6e-05 Score=57.51 Aligned_cols=68 Identities=25% Similarity=0.206 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc
Q 017649 261 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 261 l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~ 336 (368)
-..++..++.+|...|+|++|+.++++++... |.++ ..++.+|.++..+|++++|+..+++|+++...
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETD-----PDYV---GTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTCT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 34567889999999999999999999998742 3333 47889999999999999999999999987543
No 134
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.78 E-value=0.00022 Score=65.24 Aligned_cols=104 Identities=13% Similarity=0.032 Sum_probs=81.4
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh---------
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV--------- 291 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~--------- 291 (368)
......|..+...|++++|+..+++++.. .|.+ ..++..|+.++...|++++|+..+++++..
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~P~~---~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~ 189 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQL-----SNQN---GEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGL 189 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----TTSC---HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHHh-----CCcc---hhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHH
Confidence 45667788888999999999999998864 3444 456888999999999999999998887542
Q ss_pred ------------------HHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 292 ------------------YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 292 ------------------~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+++..- .+|.-...++++|.++...|++++|+..|.+++..
T Consensus 190 ~~~~~l~~~~~~~~a~~~l~~al~-~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 190 VAQIELLXQAADTPEIQQLQQQVA-ENPEDAALATQLALQLHQVGRNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccCccHHHHHHHHh-cCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhc
Confidence 111110 13444456789999999999999999999999985
No 135
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=97.77 E-value=0.00043 Score=60.02 Aligned_cols=94 Identities=15% Similarity=0.027 Sum_probs=67.7
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
...+..+...|++++|+..+++++... |.+ ..+...++.++...|++++|+.++++++... +.+
T Consensus 95 ~~la~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-----~~~--- 158 (243)
T 2q7f_A 95 YGAGNVYVVKEMYKEAKDMFEKALRAG-----MEN---GDLFYMLGTVLVKLEQPKLALPYLQRAVELN-----END--- 158 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHT-----CCS---HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----TTC---
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhC-----CCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-----Ccc---
Confidence 344555667788888888888776542 222 3456678888888888888888888877542 222
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...++.+|.++...|++++|+..+++++..
T Consensus 159 ~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 159 TEARFQFGMCLANEGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 345678888888888888888888888775
No 136
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=97.77 E-value=0.0001 Score=67.05 Aligned_cols=113 Identities=12% Similarity=0.031 Sum_probs=88.6
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC-
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH- 300 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h- 300 (368)
.....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|++++++++.......++.+
T Consensus 208 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 279 (327)
T 3cv0_A 208 LWNKLGATLANGNRPQEALDAYNRALDI-----NPGY---VRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGE 279 (327)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC----
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCCC---HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcccccccc
Confidence 3445666777889999999999988764 2333 446778999999999999999999999886644322222
Q ss_pred ---hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCC
Q 017649 301 ---PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNS 342 (368)
Q Consensus 301 ---p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~h 342 (368)
......+..+|.++..+|++++|...++++++++...+|.++
T Consensus 280 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~ 324 (327)
T 3cv0_A 280 ASREATRSMWDFFRMLLNVMNRPDLVELTYAQNVEPFAKEFGLQS 324 (327)
T ss_dssp -CCTHHHHHHHHHHHHHHHTTCHHHHHHHTTCCSHHHHHHTTSSC
T ss_pred chhhcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcchhhhHHH
Confidence 225678889999999999999999999999999988888665
No 137
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.76 E-value=0.00065 Score=56.76 Aligned_cols=100 Identities=19% Similarity=0.256 Sum_probs=60.2
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH-----------
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ----------- 293 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e----------- 293 (368)
+.+..+...|++++|++.+++++++ .|++ ..++..++.+|..+|++++|+..+.+++....
T Consensus 10 ~lG~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 81 (184)
T 3vtx_A 10 DIGDKKRTKGDFDGAIRAYKKVLKA-----DPNN---VETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGS 81 (184)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHH
Confidence 3444555666777777776666553 2333 33455666666666666666665555432110
Q ss_pred ----------------hhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 294 ----------------RVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 294 ----------------~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+.. ..+|.-...+..+|.++..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~~a~~~~~~a~-~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 82 ANFMIDEKQAAIDALQRAI-ALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHHTTCHHHHHHHHHHHH-HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH-HhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh
Confidence 000 012222345677899999999999999999999876
No 138
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=97.75 E-value=0.00013 Score=60.94 Aligned_cols=97 Identities=12% Similarity=0.107 Sum_probs=68.4
Q ss_pred ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhH----------HHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 235 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDW----------KEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 235 ~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~----------~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
.|++|++.+++++++ .| .-..++.+++.++..++++ ++|+..+++++.+- |...
T Consensus 17 ~feeA~~~~~~Ai~l-----~P---~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ld--------P~~~ 80 (158)
T 1zu2_A 17 LFEQIRQDAENTYKS-----NP---LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID--------PKKD 80 (158)
T ss_dssp HHHHHHHHHHHHHHH-----CT---TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC--------TTCH
T ss_pred HHHHHHHHHHHHHHH-----CC---CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhC--------cCcH
Confidence 356777777777654 33 3455677888888888776 47777777766532 3344
Q ss_pred HHHhhhhhHhhhcC-----------ChHHHHHHHHHHHHhhccccCCCCchHHHHHHHH
Q 017649 305 LQYYTCGKLEWFLG-----------DTENAIKSMTEAVEILRITHGTNSPFMKELILKL 352 (368)
Q Consensus 305 ~~l~~La~l~~~~g-----------~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L 352 (368)
..++++|.+|..+| ++++|+.+|++|+++ -|+++.+...+...
T Consensus 81 ~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l-----~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 81 EAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE-----QPDNTHYLKSLEMT 134 (158)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-----CTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh-----CCCCHHHHHHHHHH
Confidence 56788888888764 899999999999986 56777776665443
No 139
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.74 E-value=0.00011 Score=61.69 Aligned_cols=103 Identities=14% Similarity=0.075 Sum_probs=76.0
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH---------
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ--------- 293 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e--------- 293 (368)
.+..+..+...|++++|+..+++++.. +|.-..++..++.++...|++++|+.++++++....
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~~--------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~ 80 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSDE--------LQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIA 80 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHH--------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHH
Confidence 445566777889999999998877653 233356678899999999999999998887754310
Q ss_pred -----hhcCC------------CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 294 -----RVYPQ------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 294 -----~~~g~------------~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+. .+|.-...++.+|.++...|++++|+..+++++++
T Consensus 81 ~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 137 (176)
T 2r5s_A 81 KLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKV 137 (176)
T ss_dssp HHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHh
Confidence 00111 13444566788999999999999999999999864
No 140
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.73 E-value=0.0002 Score=70.55 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=79.6
Q ss_pred HHHHHHHHhhhcCCh-HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 222 ILSKKTLALTSCGNH-QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~-~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
.....+..+...|++ ++|+..+++++++ .|. ...++..++.+|...|++++|++++++++... |.
T Consensus 104 ~~~~lg~~~~~~g~~~~~A~~~~~~al~~-----~p~---~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~- 169 (474)
T 4abn_A 104 ALMLKGKALNVTPDYSPEAEVLLSKAVKL-----EPE---LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHC-----KN- 169 (474)
T ss_dssp HHHHHHHHHTSSSSCCHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC-----CC-
T ss_pred HHHHHHHHHHhccccHHHHHHHHHHHHhh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----CC-
Confidence 445566777888999 9999999998875 233 35678899999999999999999999998752 22
Q ss_pred hHHHHHHhhhhhHhhhc---------CChHHHHHHHHHHHHh
Q 017649 301 PLLGLQYYTCGKLEWFL---------GDTENAIKSMTEAVEI 333 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~---------g~~~eA~~~l~kAl~i 333 (368)
...+.++|.++..+ |++++|+..+++|+++
T Consensus 170 ---~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 170 ---KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQM 208 (474)
T ss_dssp ---HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHh
Confidence 37789999999999 9999999999999986
No 141
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.72 E-value=0.0003 Score=51.21 Aligned_cols=65 Identities=22% Similarity=0.327 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 261 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 261 l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+...++.++...|++++|+.++++++.. .+.+ ...++.+|.++...|++++|+.++++|+++
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 3456778999999999999999999999864 2333 456789999999999999999999999986
No 142
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=97.72 E-value=0.0001 Score=65.46 Aligned_cols=96 Identities=14% Similarity=-0.015 Sum_probs=65.8
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
..+..+...|++++|+..+++++.. +++......+...++.++...|++++|+++++++++.. |...
T Consensus 42 ~l~~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~--------~~~~ 108 (272)
T 3u4t_A 42 RRAVCYYELAKYDLAQKDIETYFSK-----VNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRD--------TTRL 108 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTT-----SCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCT
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhc-----cCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcC--------cccH
Confidence 3444566778888888887777541 22223345667778888888888888888888877631 2223
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..+..+|.++...|++++|+..+++|+++
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHhhc
Confidence 45677888888888888888888777765
No 143
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=97.72 E-value=2.9e-05 Score=65.76 Aligned_cols=44 Identities=20% Similarity=0.295 Sum_probs=37.3
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEccCCCCCCeeEEeccCCCC
Q 017649 96 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAG 139 (368)
Q Consensus 96 ~s~~nHsC~---PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~~ 139 (368)
+.++||+|. +|+...-.++++.++|+|+|++|+||++.|++.+.
T Consensus 102 mR~Vn~A~~~~eqNl~a~q~~~~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 102 MTYIKCARNEQEQNLEVVQIGTSIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECC---
T ss_pred eeeEEecCCcccCCeeeEEECCEEEEEECcCcCCCCEEEEeeCHHHH
Confidence 367899997 89887777889999999999999999999998764
No 144
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.72 E-value=2.2e-05 Score=59.79 Aligned_cols=96 Identities=14% Similarity=0.154 Sum_probs=72.3
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC-
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF- 299 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~- 299 (368)
......+..+...|++++|+..+++++.+ .|.+ ..++.+++.++..+|++++|++++++++... |.+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~----p~~~ 72 (111)
T 2l6j_A 5 EKQKEQGNSLFKQGLYREAVHCYDQLITA-----QPQN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRYT----STAE 72 (111)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC----SSTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC----CCcc
Confidence 34556677788999999999999998875 3433 4567899999999999999999999998643 322
Q ss_pred -ChHHHHHHhhhhhHhhhcCChHHHHHHHH
Q 017649 300 -HPLLGLQYYTCGKLEWFLGDTENAIKSMT 328 (368)
Q Consensus 300 -hp~~~~~l~~La~l~~~~g~~~eA~~~l~ 328 (368)
....+..++.+|.++..+|++++|+..++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 73 HVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 12236678888888888887776655433
No 145
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.72 E-value=0.00042 Score=66.12 Aligned_cols=128 Identities=8% Similarity=0.065 Sum_probs=80.7
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
+.+...+..+...|++++|.+.+.+++.....+ +.......++..++.++...|++++|+.+++.++...... ...
T Consensus 56 ~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~--~~~ 131 (434)
T 4b4t_Q 56 TSILELGQLYVTMGAKDKLREFIPHSTEYMMQF--AKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKRE--KRV 131 (434)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTS--CHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHS--SCC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHc--cchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHh--Ccc
Confidence 345556666778888888888888877765432 1122233445556666666677777777777777766654 234
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 354 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~ 354 (368)
+..+..+.+||.++...|++.+|.+++.+++.+.... .+++...++...+..
T Consensus 132 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~ 183 (434)
T 4b4t_Q 132 FLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKL--DDKPSLVDVHLLESK 183 (434)
T ss_dssp SSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS--SCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHH
Confidence 4556667777777777777777777777777665544 234444444444433
No 146
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=97.70 E-value=0.00012 Score=64.85 Aligned_cols=91 Identities=9% Similarity=-0.053 Sum_probs=73.9
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhh
Q 017649 231 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 310 (368)
Q Consensus 231 ~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~L 310 (368)
...|++++|+..+++++.. .+..++....+...++.++...|++++|+.++++++.. .|. ....++.+
T Consensus 16 ~~~~~~~~A~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~-----~~~---~~~~~~~l 83 (275)
T 1xnf_A 16 QPTLQQEVILARMEQILAS----RALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAI-----RPD---MPEVFNYL 83 (275)
T ss_dssp CCCHHHHHHHHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCC---CHHHHHHH
T ss_pred CccchHHHHHHHHHHHHhc----ccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHc-----CCC---cHHHHHHH
Confidence 3556788999988887653 12234566778899999999999999999999999874 233 34568899
Q ss_pred hhHhhhcCChHHHHHHHHHHHHh
Q 017649 311 GKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 311 a~l~~~~g~~~eA~~~l~kAl~i 333 (368)
|.++...|++++|+.++++|+.+
T Consensus 84 a~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 84 GIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHhc
Confidence 99999999999999999999986
No 147
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.00028 Score=68.49 Aligned_cols=99 Identities=10% Similarity=-0.012 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCC
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 298 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~ 298 (368)
.+..+...+..+...|++++|+..+++++... |+ ..++..++.++...|++++|+..+++++.. .|
T Consensus 5 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-----p~----~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p 70 (514)
T 2gw1_A 5 YALALKDKGNQFFRNKKYDDAIKYYNWALELK-----ED----PVFYSNLSACYVSVGDLKKVVEMSTKALEL-----KP 70 (514)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-----CC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CS
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcC-----cc----HHHHHhHHHHHHHHhhHHHHHHHHHHHhcc-----Ch
Confidence 44567778888899999999999999988753 32 456888999999999999999999999863 23
Q ss_pred CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 299 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 299 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
. ....++.+|.++..+|++++|+..+++++.+-
T Consensus 71 ~---~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 103 (514)
T 2gw1_A 71 D---YSKVLLRRASANEGLGKFADAMFDLSVLSLNG 103 (514)
T ss_dssp C---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSS
T ss_pred H---HHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 3 34668889999999999999999999998754
No 148
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.0012 Score=62.82 Aligned_cols=118 Identities=14% Similarity=-0.028 Sum_probs=97.5
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++.+|...++.++...... .+++..+.+...++.+|..+|+|++|..++++++.+.... +..+..
T Consensus 138 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~ 214 (434)
T 4b4t_Q 138 SIKLATLHYQKKQYKDSLALINDLLREFKKL--DDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSI-YCPTQT 214 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS--SCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCHHH
T ss_pred HHHHHHHHHHccChHHHHHHHHHHHHHHHhc--ccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcC-CCchHH
Confidence 3445666778899999999999887765432 3466778889999999999999999999999999887665 344566
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCc
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSP 343 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp 343 (368)
.+..+..+|.++...|++.+|..++.+|++........++.
T Consensus 215 ~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~~~~~~~~~~~ 255 (434)
T 4b4t_Q 215 VAELDLMSGILHCEDKDYKTAFSYFFESFESYHNLTTHNSY 255 (434)
T ss_dssp HHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHTTTSSCH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhhH
Confidence 78889999999999999999999999999998877666654
No 149
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.68 E-value=0.00029 Score=66.41 Aligned_cols=60 Identities=25% Similarity=0.236 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
...++.++...|++++|++++++++.. +|.....+.++|.++...|++++|+..+++|+.
T Consensus 138 ~~~l~~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 197 (388)
T 1w3b_A 138 RSDLGNLLKALGRLEEAKACYLKAIET--------QPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVT 197 (388)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 344555555555555555555544432 222233444555555555555555555555544
No 150
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=97.64 E-value=3.6e-05 Score=76.14 Aligned_cols=108 Identities=13% Similarity=-0.006 Sum_probs=80.9
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|++.+++++++ +|. ...++.+++.+|..+|++++|+++++++++. .|.+
T Consensus 41 ~~~~~lg~~~~~~g~~~~A~~~~~~al~l-----~p~---~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~p~~ 107 (477)
T 1wao_1 41 IYYGNRSLAYLRTECYGYALGDATRAIEL-----DKK---YIKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHD 107 (477)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----CTT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC
Confidence 34556777788999999999999998865 333 3567889999999999999999999999875 2333
Q ss_pred hHHHHHHhhhhhH--hhhcCChHHHHHHHH-----------HHHHhhccccCCCCch
Q 017649 301 PLLGLQYYTCGKL--EWFLGDTENAIKSMT-----------EAVEILRITHGTNSPF 344 (368)
Q Consensus 301 p~~~~~l~~La~l--~~~~g~~~eA~~~l~-----------kAl~i~~~~~G~~hp~ 344 (368)
+ ..+..++.+ +..+|++++|+..++ +|+.+-....|+.++.
T Consensus 108 ~---~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~ 161 (477)
T 1wao_1 108 K---DAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEYSGPKLED 161 (477)
T ss_dssp T---THHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTCCSCCCGG
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccccccccccc
Confidence 3 345566666 778899999999999 8888777778888875
No 151
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.62 E-value=0.00041 Score=66.40 Aligned_cols=98 Identities=13% Similarity=0.102 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 220 VNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 220 ~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
.......+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .|.
T Consensus 26 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~-----~p~~---~~~~~~l~~~~~~~g~~~~A~~~~~~al~~-----~p~ 92 (450)
T 2y4t_A 26 VEKHLELGKKLLAAGQLADALSQFHAAVDG-----DPDN---YIAYYRRATVFLAMGKSKAALPDLTKVIQL-----KMD 92 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh-----CCcc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc-----CCC
Confidence 344556677788899999999999988764 3333 566788999999999999999999998874 233
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
....++.+|.++..+|++++|+..+++++++
T Consensus 93 ---~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 123 (450)
T 2y4t_A 93 ---FTAARLQRGHLLLKQGKLDEAEDDFKKVLKS 123 (450)
T ss_dssp ---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred ---cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3567889999999999999999999999863
No 152
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.62 E-value=0.00063 Score=67.71 Aligned_cols=111 Identities=14% Similarity=0.059 Sum_probs=85.6
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCcccc-HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVN-LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~-l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
....+..+...|++++|++.+++++...... +.++. ...++..++.+|...|++++|+++++++++.. |.++
T Consensus 478 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-----p~~~ 550 (597)
T 2xpi_A 478 LNELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLLS-----TNDA 550 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-----SCCH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CCCh
Confidence 3445666778899999999999888764321 22333 36778899999999999999999999988752 3443
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKEL 348 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l 348 (368)
..+..+|.++...|++++|+.++++++++ .|+++.....
T Consensus 551 ---~~~~~l~~~~~~~g~~~~A~~~~~~~l~~-----~p~~~~~~~~ 589 (597)
T 2xpi_A 551 ---NVHTAIALVYLHKKIPGLAITHLHESLAI-----SPNEIMASDL 589 (597)
T ss_dssp ---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCHHHHHHHHHHHHhc-----CCCChHHHHH
Confidence 66789999999999999999999999985 5666654443
No 153
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.60 E-value=0.00033 Score=67.14 Aligned_cols=53 Identities=13% Similarity=0.077 Sum_probs=27.0
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhh-HHHHHHHHHhhhh
Q 017649 230 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIP 290 (368)
Q Consensus 230 ~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~-~~~Al~~~~~~l~ 290 (368)
+...|++++|+..+++++.+ .|. -..++.+++.++..+|+ +++|+..+++++.
T Consensus 107 ~~~~g~~~~Al~~~~~al~l-----~P~---~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~ 160 (382)
T 2h6f_A 107 LQRDERSERAFKLTRDAIEL-----NAA---NYTVWHFRRVLLKSLQKDLHEEMNYITAIIE 160 (382)
T ss_dssp HHHTCCCHHHHHHHHHHHHH-----CTT---CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHCCChHHHHHHHHHHHHh-----Ccc---CHHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 34455566666666555543 122 23344455555555554 5555555555554
No 154
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.00057 Score=51.66 Aligned_cols=86 Identities=16% Similarity=0.181 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 341 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~ 341 (368)
..+...++.++...|+|++|++++++++.. .|.+ ...++++|.++..+|++++|+..+++|+++. |+
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-----p~ 70 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITA-----QPQN---PVGYSNKAMALIKLGEYTQAIQMCQQGLRYT-----ST 70 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC-----SS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CC
Confidence 355678999999999999999999999875 2333 4568899999999999999999999999753 33
Q ss_pred C---chHHHHHHHHHHHHHHHh
Q 017649 342 S---PFMKELILKLEEAQAEAS 360 (368)
Q Consensus 342 h---p~~~~l~~~L~~~~~el~ 360 (368)
+ .........+..+...+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~ 92 (111)
T 2l6j_A 71 AEHVAIRSKLQYRLELAQGAVG 92 (111)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 3 122444445555555444
No 155
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.58 E-value=0.00033 Score=54.74 Aligned_cols=83 Identities=11% Similarity=-0.055 Sum_probs=66.1
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCch
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 344 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~ 344 (368)
...++..+...|+|++|+.++++++.. .|.++.....++.+|.++..+|++++|+..+++++.. .|+++.
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~-----~p~~~~ 74 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLEL-----YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSR-----YPTHDK 74 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTSTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHH-----CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHH-----CCCCcc
Confidence 456888899999999999999988764 3567777788899999999999999999999999874 467765
Q ss_pred HHHHHHHHHHHHH
Q 017649 345 MKELILKLEEAQA 357 (368)
Q Consensus 345 ~~~l~~~L~~~~~ 357 (368)
..+....+..+..
T Consensus 75 ~~~~~~~la~~~~ 87 (129)
T 2xev_A 75 AAGGLLKLGLSQY 87 (129)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 5555555554443
No 156
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.56 E-value=0.00091 Score=54.25 Aligned_cols=100 Identities=12% Similarity=0.000 Sum_probs=76.6
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.. .|.+ ..+...++.++..+|++++|+.++++++.. .|.++
T Consensus 49 ~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~p~~~ 115 (166)
T 1a17_A 49 YYGNRSLAYLRTECYGYALGDATRAIEL-----DKKY---IKGYYRRAASNMALGKFRAALRDYETVVKV-----KPHDK 115 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----Cccc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh-----CCCCH
Confidence 3445666777889999999999998775 2333 456788999999999999999999998864 23444
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
. +.....++..+...|++++|+..+.++..++.
T Consensus 116 ~-~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 148 (166)
T 1a17_A 116 D-AKMKYQECNKIVKQKAFERAIAGDEHKRSVVD 148 (166)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHcccchHHHhc
Confidence 3 23445566667788999999999999887764
No 157
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.55 E-value=0.0011 Score=65.95 Aligned_cols=78 Identities=14% Similarity=0.124 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH-HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC
Q 017649 263 QTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 341 (368)
Q Consensus 263 ~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~-~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~ 341 (368)
.++..++.+|...|++++|+++++++++..... +.+|. ....+..+|.++...|++++|+..+++++++ +|+
T Consensus 476 ~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~--~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~-----~p~ 548 (597)
T 2xpi_A 476 LLLNELGVVAFNKSDMQTAINHFQNALLLVKKT--QSNEKPWAATWANLGHAYRKLKMYDAAIDALNQGLLL-----STN 548 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS--CCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----SSC
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcc--ccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----CCC
Confidence 456778888889999999999999888766532 33454 3678899999999999999999999999986 466
Q ss_pred CchHHH
Q 017649 342 SPFMKE 347 (368)
Q Consensus 342 hp~~~~ 347 (368)
++.+..
T Consensus 549 ~~~~~~ 554 (597)
T 2xpi_A 549 DANVHT 554 (597)
T ss_dssp CHHHHH
T ss_pred ChHHHH
Confidence 654433
No 158
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.49 E-value=0.00025 Score=68.00 Aligned_cols=95 Identities=11% Similarity=-0.024 Sum_probs=69.2
Q ss_pred HHHHHHHhhhcCC-hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 223 LSKKTLALTSCGN-HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 223 l~~~a~~~~~~g~-~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
....+..+...|+ +++|+..+++++.+ .| .-..++.+++.++..+|++++|+..+++++..- |
T Consensus 134 ~~~~g~~l~~~g~d~~eAl~~~~~al~l-----~P---~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ld--------P 197 (382)
T 2h6f_A 134 WHFRRVLLKSLQKDLHEEMNYITAIIEE-----QP---KNYQVWHHRRVLVEWLRDPSQELEFIADILNQD--------A 197 (382)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHHHHH-----CT---TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC--------T
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHH-----CC---CCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC--------c
Confidence 3455666677786 99999988888764 23 334567788888888888888888888887632 2
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.-...++++|.++..+|++++|+..+++|+++
T Consensus 198 ~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 198 KNYHAWQHRQWVIQEFKLWDNELQYVDQLLKE 229 (382)
T ss_dssp TCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCChHHHHHHHHHHHHh
Confidence 23355677888888888888888888887764
No 159
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.47 E-value=0.00032 Score=58.01 Aligned_cols=75 Identities=9% Similarity=-0.017 Sum_probs=62.5
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
+|.-..++..++.++...|++++|+.++++++.. .|.+| ..++++|.++..+|++++|+..|++|+.+
T Consensus 32 ~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~-----~P~~~---~~~~~lg~~~~~~g~~~~Ai~~~~~al~l---- 99 (151)
T 3gyz_A 32 PDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIY-----DFYNV---DYIMGLAAIYQIKEQFQQAADLYAVAFAL---- 99 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHHccHHHHHHHHHHHHhh----
Confidence 5556677889999999999999999999999874 34444 56889999999999999999999999985
Q ss_pred cCCCCchH
Q 017649 338 HGTNSPFM 345 (368)
Q Consensus 338 ~G~~hp~~ 345 (368)
.|++|..
T Consensus 100 -~P~~~~~ 106 (151)
T 3gyz_A 100 -GKNDYTP 106 (151)
T ss_dssp -SSSCCHH
T ss_pred -CCCCcHH
Confidence 3566544
No 160
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.46 E-value=0.0008 Score=67.38 Aligned_cols=98 Identities=10% Similarity=-0.113 Sum_probs=79.9
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|++.+++++++ .|.+ ..++.+++.+|..+|++++|+++++++++.. +.+
T Consensus 59 ~~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-----p~~- 124 (568)
T 2vsy_A 59 AVARLGRVRWTQQRHAEAAVLLQQASDA-----APEH---PGIALWLGHALEDAGQAEAAAAAYTRAHQLL-----PEE- 124 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC-
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC-
Confidence 3455666778889999999999998875 3333 5567899999999999999999999988752 233
Q ss_pred HHHHHHhhhhhHhhhc---CChHHHHHHHHHHHHhhc
Q 017649 302 LLGLQYYTCGKLEWFL---GDTENAIKSMTEAVEILR 335 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~---g~~~eA~~~l~kAl~i~~ 335 (368)
...+.++|.++..+ |++++|+..+++|++.-.
T Consensus 125 --~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p 159 (568)
T 2vsy_A 125 --PYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGV 159 (568)
T ss_dssp --HHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCC
Confidence 45678999999999 999999999999987644
No 161
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=97.44 E-value=0.0021 Score=62.30 Aligned_cols=116 Identities=14% Similarity=0.075 Sum_probs=86.7
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh---hhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME---LEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~---~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
....+..+...|++++|+..+++++...... +.......+...++.++.. .|++++|+.++++++.. .+.
T Consensus 375 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~-----~~~ 447 (514)
T 2gw1_A 375 PNFFAEILTDKNDFDKALKQYDLAIELENKL--DGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKL-----DPR 447 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS--SSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHH-----CTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc--chHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHh-----Ccc
Confidence 3455667778899999999999887754221 1111223467789999999 99999999999998874 233
Q ss_pred ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHH
Q 017649 300 HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLE 353 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~ 353 (368)
+ ...+..+|.++...|++++|+.++++|+++ .|+++.....+..++
T Consensus 448 ~---~~~~~~la~~~~~~g~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~~ 493 (514)
T 2gw1_A 448 S---EQAKIGLAQMKLQQEDIDEAITLFEESADL-----ARTMEEKLQAITFAE 493 (514)
T ss_dssp C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSHHHHHHHHHHHH
T ss_pred c---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----ccccHHHHHHHHHHH
Confidence 3 456789999999999999999999999985 566666655554433
No 162
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=97.40 E-value=0.00036 Score=57.15 Aligned_cols=75 Identities=13% Similarity=0.127 Sum_probs=60.7
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
++.-..+...++.++...|+|++|+.++++++.. .|.++ ..++.+|.++..+|++++|+..+++|+.+
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~l---- 84 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVL-----DHYDS---RFFLGLGACRQAMGQYDLAIHSYSYGAVM---- 84 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHc-----CcccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 3445667788999999999999999999998863 23444 45689999999999999999999999985
Q ss_pred cCCCCchH
Q 017649 338 HGTNSPFM 345 (368)
Q Consensus 338 ~G~~hp~~ 345 (368)
.|++|..
T Consensus 85 -~p~~~~~ 91 (148)
T 2vgx_A 85 -DIXEPRF 91 (148)
T ss_dssp -STTCTHH
T ss_pred -CCCCchH
Confidence 4666644
No 163
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.40 E-value=0.00055 Score=56.96 Aligned_cols=88 Identities=9% Similarity=0.091 Sum_probs=66.7
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhh
Q 017649 230 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYT 309 (368)
Q Consensus 230 ~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~ 309 (368)
+...|++++|+..+++++.. .|.+ ..+...++.+|...|++++|+.++++++... |.++ ..++.
T Consensus 20 ~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----p~~~---~~~~~ 83 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRA-----NPQN---SEQWALLGEYYLWQNDYSNSLLAYRQALQLR-----GENA---ELYAA 83 (177)
T ss_dssp CC-----CCCCHHHHHHHHH-----CCSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH-----CSCH---HHHHH
T ss_pred hhhccCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCCH---HHHHH
Confidence 45667888898888887764 2333 4567889999999999999999999998754 3333 46788
Q ss_pred hhhH-hhhcCCh--HHHHHHHHHHHHh
Q 017649 310 CGKL-EWFLGDT--ENAIKSMTEAVEI 333 (368)
Q Consensus 310 La~l-~~~~g~~--~eA~~~l~kAl~i 333 (368)
+|.+ +...|++ ++|+..+++++.+
T Consensus 84 la~~l~~~~~~~~~~~A~~~~~~al~~ 110 (177)
T 2e2e_A 84 LATVLYYQASQHMTAQTRAMIDKALAL 110 (177)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcchHHHHHHHHHHHHh
Confidence 9999 7789998 9999999999986
No 164
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.001 Score=51.91 Aligned_cols=64 Identities=17% Similarity=0.021 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+..++..+...|+|++|+.++.+++... |. -...++++|.++..+|++++|+..+++|+++
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----p~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRA-----PE---DARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TT---CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-----CC---ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4556778999999999999999999998742 23 3467899999999999999999999999986
No 165
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.40 E-value=0.00087 Score=55.06 Aligned_cols=74 Identities=14% Similarity=0.079 Sum_probs=62.5
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC----------ChHHHHHHhhhhhHhhhcCChHHHHHHHHH
Q 017649 260 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF----------HPLLGLQYYTCGKLEWFLGDTENAIKSMTE 329 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~----------hp~~~~~l~~La~l~~~~g~~~eA~~~l~k 329 (368)
.....+...+..+...|+|++|+.++.+++.......+.. .|.....++++|.++..+|++++|+..+.+
T Consensus 9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~ 88 (162)
T 3rkv_A 9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSE 88 (162)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 3456677889999999999999999999999876654322 466678899999999999999999999999
Q ss_pred HHHh
Q 017649 330 AVEI 333 (368)
Q Consensus 330 Al~i 333 (368)
|+.+
T Consensus 89 al~~ 92 (162)
T 3rkv_A 89 VLKR 92 (162)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 9886
No 166
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=97.39 E-value=0.00012 Score=63.24 Aligned_cols=43 Identities=16% Similarity=0.247 Sum_probs=38.1
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEccCCCCCCeeEEeccCCC
Q 017649 96 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETA 138 (368)
Q Consensus 96 ~s~~nHsC~---PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~ 138 (368)
+.++||+|. +|+...-.++++.++|+|+|++|+||++.|++.+
T Consensus 132 mRfVn~A~~~~eqNl~a~q~~~~I~y~a~RdI~pGeELlvwYg~~Y 177 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDF 177 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHH
T ss_pred EEeEEecCCcccCCcEEEEECCEEEEEECcccCCCCEEEEecCHHH
Confidence 468899997 7998877889999999999999999999998654
No 167
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=97.39 E-value=0.0016 Score=59.64 Aligned_cols=104 Identities=13% Similarity=0.018 Sum_probs=74.2
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
....+..+...|++++|++.+++++.. +|.+. .......+...+...|++++|+..++++++. +| .+
T Consensus 133 ~~~l~~~~~~~g~~~~A~~~l~~~~~~-----~p~~~-~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~----~p-~~-- 199 (291)
T 3mkr_A 133 MAMTVQILLKLDRLDLARKELKKMQDQ-----DEDAT-LTQLATAWVSLAAGGEKLQDAYYIFQEMADK----CS-PT-- 199 (291)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH-HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH----SC-CC--
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHhh-----CcCcH-HHHHHHHHHHHHhCchHHHHHHHHHHHHHHh----CC-Cc--
Confidence 334455677889999999999988764 34443 1222222334444568999999999998864 33 33
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
...++.+|.++..+|++++|+..+++|+.+ .|++|.+
T Consensus 200 -~~~~~~la~~~~~~g~~~eA~~~l~~al~~-----~p~~~~~ 236 (291)
T 3mkr_A 200 -LLLLNGQAACHMAQGRWEAAEGVLQEALDK-----DSGHPET 236 (291)
T ss_dssp -HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred -HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHHH
Confidence 456889999999999999999999999975 3555543
No 168
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.38 E-value=0.00079 Score=65.87 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCC
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 298 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~ 298 (368)
....+...+..+...|++++|+..+++++.. .|.+ ..++..++.+|..+|++++|++.+++++.. .|
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~-----~p 90 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIEL-----DPNE---PVFYSNISACYISTGDLEKVIEFTTKALEI-----KP 90 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh-----CCCC---cHHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CC
Confidence 4566778888899999999999999998865 2444 466888999999999999999999999874 23
Q ss_pred CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHH
Q 017649 299 FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAV 331 (368)
Q Consensus 299 ~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl 331 (368)
.+ ...++.+|.++..+|++++|+..++ ++
T Consensus 91 ~~---~~~~~~la~~~~~~g~~~~A~~~~~-~~ 119 (537)
T 3fp2_A 91 DH---SKALLRRASANESLGNFTDAMFDLS-VL 119 (537)
T ss_dssp TC---HHHHHHHHHHHHHHTCHHHHHHHHH-HH
T ss_pred ch---HHHHHHHHHHHHHcCCHHHHHHHHH-HH
Confidence 33 4568899999999999999999884 44
No 169
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=97.37 E-value=0.0017 Score=47.02 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=60.4
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..+++++.. .|.+ ..+...++.++...|++++|+.++++++.. .|.++
T Consensus 11 ~~~~la~~~~~~~~~~~A~~~~~~a~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~-----~p~~~ 77 (91)
T 1na3_A 11 AWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL-----DPNNA 77 (91)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhc-----CCCC---HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----CCCCH
Confidence 3445566677889999999999998764 2333 456778999999999999999999999874 23333
Q ss_pred HHHHHHhhhhhHhhhcC
Q 017649 302 LLGLQYYTCGKLEWFLG 318 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g 318 (368)
..+..+|.++..+|
T Consensus 78 ---~~~~~l~~~~~~~g 91 (91)
T 1na3_A 78 ---EAKQNLGNAKQKQG 91 (91)
T ss_dssp ---HHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHhcC
Confidence 45677777776543
No 170
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=97.36 E-value=0.001 Score=62.33 Aligned_cols=100 Identities=8% Similarity=-0.059 Sum_probs=78.6
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
....+.+..+...|++++|+..+++++.+ .|.+ ..++.+++.+|..+|++++|+.++++++.. .|.+
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~ 263 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALEL-----DSNN---EKGLSRRGEAHLAVNDFELARADFQKVLQL-----YPNN 263 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CSSC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCc---HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----CCCC
Confidence 45566777788899999999999999875 2333 467789999999999999999999999874 2333
Q ss_pred hHHHHHHhhhhhHhhhcCChHHH-HHHHHHHHHhhcc
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENA-IKSMTEAVEILRI 336 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA-~~~l~kAl~i~~~ 336 (368)
+ ..+..+|.++..+|++++| ...+++.+..+..
T Consensus 264 ~---~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 264 K---AAKTQLAVCQQRIRRQLAREKKLYANMFERLAE 297 (336)
T ss_dssp H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 3 4678999999999999998 4567776655443
No 171
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.35 E-value=0.0014 Score=50.48 Aligned_cols=86 Identities=10% Similarity=0.037 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN 341 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~ 341 (368)
......++.++...|+|++|+.++.+++... +.+ ...++.+|.++...|++++|+.++++++.+... .+++
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~ 74 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELD-----PTN---MTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NRED 74 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-----Ccc---HHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchh
Confidence 4566789999999999999999999998742 233 456789999999999999999999999987643 2444
Q ss_pred CchHHHHHHHHHHHH
Q 017649 342 SPFMKELILKLEEAQ 356 (368)
Q Consensus 342 hp~~~~l~~~L~~~~ 356 (368)
++....+...+..+.
T Consensus 75 ~~~~~~~~~~la~~~ 89 (131)
T 1elr_A 75 YRQIAKAYARIGNSY 89 (131)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 444344444554443
No 172
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.33 E-value=0.0014 Score=53.97 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=57.9
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+......+..++.++...|+|++|+.++++++... |.....++++|.++..+|++++|+..+++|+.+
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~--------p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 74 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIA--------PANPIYLSNRAAAYSASGQHEKAAEDAELATVV 74 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 34456677889999999999999999999998753 233567899999999999999999999999986
No 173
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=97.30 E-value=0.0024 Score=62.38 Aligned_cols=94 Identities=18% Similarity=0.089 Sum_probs=63.0
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
...+..+...|++++|+..+++++.. .|.+ ..++..++.++...|++++|+.++++++... |.++
T Consensus 280 ~~l~~~~~~~~~~~~A~~~~~~~~~~-----~~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-----~~~~-- 344 (537)
T 3fp2_A 280 IFLALTLADKENSQEFFKFFQKAVDL-----NPEY---PPTYYHRGQMYFILQDYKNAKEDFQKAQSLN-----PENV-- 344 (537)
T ss_dssp HHHHHHTCCSSCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTCS--
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHhcc-----CCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhC-----CCCH--
Confidence 34455566677777777777776653 2222 3456677778888888888888877777632 2232
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..+..+|.++...|++++|+..+++++++
T Consensus 345 -~~~~~la~~~~~~g~~~~A~~~~~~~~~~ 373 (537)
T 3fp2_A 345 -YPYIQLACLLYKQGKFTESEAFFNETKLK 373 (537)
T ss_dssp -HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45667777787888888888888877765
No 174
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.25 E-value=0.0021 Score=57.26 Aligned_cols=80 Identities=16% Similarity=0.103 Sum_probs=49.5
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh----hhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHh
Q 017649 233 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYY 308 (368)
Q Consensus 233 ~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~----~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~ 308 (368)
.+++++|+..++++.... -..+...|+.+|.. .+++++|+.+++++++. .+ ...++
T Consensus 55 ~~~~~~A~~~~~~a~~~~----------~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~ 114 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN----------YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-------KY---AEGCA 114 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT----------CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHH
T ss_pred CCCHHHHHHHHHHHHHCC----------CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc-------CC---ccHHH
Confidence 566666666666554431 23455666666666 66777776666666542 12 24566
Q ss_pred hhhhHhhh----cCChHHHHHHHHHHHH
Q 017649 309 TCGKLEWF----LGDTENAIKSMTEAVE 332 (368)
Q Consensus 309 ~La~l~~~----~g~~~eA~~~l~kAl~ 332 (368)
++|.++.. .+++++|+.++++|++
T Consensus 115 ~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 142 (273)
T 1ouv_A 115 SLGGIYHDGKVVTRDFKKAVEYFTKACD 142 (273)
T ss_dssp HHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcccCHHHHHHHHHHHHh
Confidence 67777776 7777777777777766
No 175
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.25 E-value=0.00089 Score=69.01 Aligned_cols=94 Identities=9% Similarity=-0.029 Sum_probs=63.5
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
.....+..+...|++++|+..++++++. .|.+ ..++.+++.++..+|++++|++.+++++... |.+
T Consensus 435 ~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~-----P~~- 500 (681)
T 2pzi_A 435 LPLMEVRALLDLGDVAKATRKLDDLAER-----VGWR---WRLVWYRAVAELLTGDYDSATKHFTEVLDTF-----PGE- 500 (681)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH-----HCCC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-----TTC-
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHhcc-----Ccch---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----CCC-
Confidence 3445666777889999999999888765 2333 4567889999999999999999998887642 222
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
...++++|.++..+|++++ +..|++|++
T Consensus 501 --~~~~~~lg~~~~~~g~~~~-~~~~~~al~ 528 (681)
T 2pzi_A 501 --LAPKLALAATAELAGNTDE-HKFYQTVWS 528 (681)
T ss_dssp --SHHHHHHHHHHHHHTCCCT-TCHHHHHHH
T ss_pred --hHHHHHHHHHHHHcCChHH-HHHHHHHHH
Confidence 2334455555555555555 555555554
No 176
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.24 E-value=0.0017 Score=50.33 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=60.0
Q ss_pred CCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 255 HPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 255 ~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.+..+....++..++.++...|+|++|+.++++++... +.+ ...++.+|.++...|++++|+.++++|+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~-----~~~---~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 9 SHMNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRN-----PKD---AKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp CCSSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTC-----TTC---HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred CCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-----CCc---HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 34566677888999999999999999999999988642 223 567889999999999999999999999985
No 177
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.24 E-value=0.0025 Score=50.46 Aligned_cols=70 Identities=16% Similarity=0.061 Sum_probs=60.6
Q ss_pred ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 259 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 259 ~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+........++..+...|+|++|++++++++.. .+.++.....++.+|.++...|++++|+..+++++.+
T Consensus 25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~-----~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGL-----DATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-----cccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 344667788999999999999999999998863 3566667888999999999999999999999999986
No 178
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=97.22 E-value=0.0021 Score=51.61 Aligned_cols=75 Identities=17% Similarity=0.170 Sum_probs=60.6
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
++.-......++..+...|+|++|+.++++++.. .|.++ ..++.+|.++..+|++++|+..+++|+.+
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~~~~~lg~~~~~~g~~~~A~~~~~~al~~---- 81 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCML-----DHYDA---RYFLGLGACRQSLGLYEQALQSYSYGALM---- 81 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHH----
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHh-----CCccH---HHHHHHHHHHHHHhhHHHHHHHHHHHHhc----
Confidence 3445667788999999999999999999998863 33444 55789999999999999999999999985
Q ss_pred cCCCCchH
Q 017649 338 HGTNSPFM 345 (368)
Q Consensus 338 ~G~~hp~~ 345 (368)
.|++|..
T Consensus 82 -~p~~~~~ 88 (142)
T 2xcb_A 82 -DINEPRF 88 (142)
T ss_dssp -CTTCTHH
T ss_pred -CCCCcHH
Confidence 4666644
No 179
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=97.18 E-value=0.003 Score=52.75 Aligned_cols=73 Identities=12% Similarity=0.063 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCC----C-ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ----F-HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~----~-hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
.....+.+..+...|+|++|++.+++++..... +|. + .|..+..+.++|.++..+|++++|+..+.+|++++.
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~-~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n 88 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHT-MPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFN 88 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-SCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCC-CcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhh
Confidence 344567888899999999999999999987654 221 1 133566899999999999999999999999999743
No 180
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.17 E-value=0.00072 Score=69.73 Aligned_cols=95 Identities=13% Similarity=0.041 Sum_probs=72.3
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhh
Q 017649 231 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTC 310 (368)
Q Consensus 231 ~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~L 310 (368)
...|++++|++.+++++...-..-...++....++..++.++..+|++++|++.++++++.. |.+ ...++.+
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-----p~~---~~a~~~l 473 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERV-----GWR---WRLVWYR 473 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH-----CCC---HHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccC-----cch---HHHHHHH
Confidence 57789999999998887211111112233344567789999999999999999999998742 333 4578899
Q ss_pred hhHhhhcCChHHHHHHHHHHHHh
Q 017649 311 GKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 311 a~l~~~~g~~~eA~~~l~kAl~i 333 (368)
|.++..+|++++|+..|++|+++
T Consensus 474 g~~~~~~g~~~~A~~~~~~al~l 496 (681)
T 2pzi_A 474 AVAELLTGDYDSATKHFTEVLDT 496 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999975
No 181
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=97.12 E-value=0.00027 Score=58.65 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=38.5
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEccCCCCCCeeEEeccCCC
Q 017649 96 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETA 138 (368)
Q Consensus 96 ~s~~nHsC~---PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~ 138 (368)
+.++||+|. +|+...-.++.+.++|+|+|++|+||++-|.+.+
T Consensus 97 mr~vn~a~~~~eqNl~a~q~~~~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 97 MMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp GGGCCBCCSTTTCCEEEEECSSSEEEEESSCBCTTCBCCEEECHHH
T ss_pred eeeeeccCCccCCCcEEEEeCCeEEEEEeeecCCCCEEEEechHHH
Confidence 468899998 7998877888999999999999999999998654
No 182
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.12 E-value=0.0028 Score=49.74 Aligned_cols=66 Identities=17% Similarity=0.086 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 260 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
........++.++...|+|++|+.++++++... |.+ ...++.+|.++..+|++++|+..+++|+.+
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~-----~~~---~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN-----PLV---AVYYTNRALCYLKMQQPEQALADCRRALEL 72 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhC-----cCc---HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 345667889999999999999999999988742 333 467899999999999999999999999985
No 183
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.10 E-value=0.0051 Score=47.01 Aligned_cols=76 Identities=9% Similarity=-0.073 Sum_probs=60.4
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCch
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 344 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~ 344 (368)
...|+..+...|+|..|+.+++.++.....--. .-+.....+..||..+..+|++++|+.++++|+. +.|+|+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~~~ 81 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEHQR 81 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCCHH
Confidence 346899999999999999999999987642211 1234456778999999999999999999999987 4677866
Q ss_pred HH
Q 017649 345 MK 346 (368)
Q Consensus 345 ~~ 346 (368)
+.
T Consensus 82 ~~ 83 (104)
T 2v5f_A 82 AN 83 (104)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 184
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=97.09 E-value=0.0013 Score=48.95 Aligned_cols=67 Identities=27% Similarity=0.333 Sum_probs=54.1
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 267 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 267 ~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
..+..+...|+|++|+.++++++.. .|.++. ..++.+|.++..+|++++|+..+++|+.+ .|+++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~~~--~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 71 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT-----EPVGKD--EAYYLMGNAYRKLGDWQKALNNYQSAIEL-----NPDSPAL 71 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CSSTHH--HHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----CTTSTHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH-----CCCcHH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhc-----CCCcHHH
Confidence 5677888999999999999998874 233432 16889999999999999999999999975 4566544
No 185
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.01 E-value=0.0031 Score=57.76 Aligned_cols=90 Identities=13% Similarity=0.057 Sum_probs=58.3
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH-H
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-G 304 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~-~ 304 (368)
.|..+...|++++|.+++..+.. .+|.+. +...++.++...++|++|+.+++.+.. + .+|.. .
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~~~-----~~p~~~----~~~~~a~l~~~~~r~~dA~~~l~~a~~-----~--~d~~~~~ 171 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAAPV-----AGSEHL----VAWMKAVVYGAAERWTDVIDQVKSAGK-----W--PDKFLAG 171 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSSCC-----TTCHHH----HHHHHHHHHHHTTCHHHHHHHHTTGGG-----C--SCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHh-----cCCchH----HHHHHHHHHHHcCCHHHHHHHHHHhhc-----c--CCcccHH
Confidence 34455677888888877654321 233332 556677777788888888777764432 1 14444 3
Q ss_pred HHHhhhhhHhhhcCChHHHHHHHHHHH
Q 017649 305 LQYYTCGKLEWFLGDTENAIKSMTEAV 331 (368)
Q Consensus 305 ~~l~~La~l~~~~g~~~eA~~~l~kAl 331 (368)
...+.||.++..+|++++|+.+|++|.
T Consensus 172 ~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 172 AAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 366777888888888888888888776
No 186
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=97.01 E-value=0.0069 Score=55.43 Aligned_cols=97 Identities=11% Similarity=-0.043 Sum_probs=73.7
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccH-HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNL-MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l-~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
+..+..+...++|++|+..++.+.. .+ ++.. ..+...|+.++..+|++++|++++++++. |+.-|.
T Consensus 139 ~~~a~l~~~~~r~~dA~~~l~~a~~------~~-d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~------g~~~P~ 205 (282)
T 4f3v_A 139 WMKAVVYGAAERWTDVIDQVKSAGK------WP-DKFLAGAAGVAHGVAAANLALFTEAERRLTEAND------SPAGEA 205 (282)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTGGG------CS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHT------STTTTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHHhhc------cC-CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhc------CCCCcc
Confidence 3444566788899999988763311 12 2222 45788999999999999999999998763 332255
Q ss_pred -HHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 303 -LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 303 -~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..-..+++|.++..+|+.++|+..|++++..
T Consensus 206 ~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 206 CARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 5567899999999999999999999999873
No 187
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=96.99 E-value=0.0054 Score=54.57 Aligned_cols=89 Identities=19% Similarity=0.142 Sum_probs=70.7
Q ss_pred HHHHHhhh----cCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh----hhhHHHHHHHHHhhhhhHHhhc
Q 017649 225 KKTLALTS----CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVY 296 (368)
Q Consensus 225 ~~a~~~~~----~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~----~g~~~~Al~~~~~~l~~~e~~~ 296 (368)
..+..+.. .+++++|+..++++... . ...+..+|+.+|.. .+++++|+.+++++++.
T Consensus 79 ~lg~~~~~g~~~~~~~~~A~~~~~~a~~~-------~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~----- 143 (273)
T 1ouv_A 79 LLGNLYYSGQGVSQNTNKALQYYSKACDL-------K---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL----- 143 (273)
T ss_dssp HHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-----
T ss_pred HHHHHHhCCCCcccCHHHHHHHHHHHHHc-------C---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc-----
Confidence 34445566 88999999999888653 1 24677889999998 99999999999988863
Q ss_pred CCCChHHHHHHhhhhhHhhh----cCChHHHHHHHHHHHHh
Q 017649 297 PQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 297 g~~hp~~~~~l~~La~l~~~----~g~~~eA~~~l~kAl~i 333 (368)
+ + ...++++|.++.. .+++++|+.++++|++.
T Consensus 144 ~--~---~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 144 N--D---GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp T--C---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred C--c---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 2 2 3467889999988 89999999999999875
No 188
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.98 E-value=0.0051 Score=47.10 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=56.0
Q ss_pred ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 259 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 259 ~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+........++..+...|++++|+.++++++... |.....++.+|.++...|++++|+..+.+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 75 (131)
T 2vyi_A 9 SAEAERLKTEGNEQMKVENFEAAVHFYGKAIELN--------PANAVYFCNRAAAYSKLGNYAGAVQDCERAICI 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcC--------CCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhc
Confidence 3445667788999999999999999999988642 223457889999999999999999999999985
No 189
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.94 E-value=0.0031 Score=46.83 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=48.0
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHH-HHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQ-TREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~-~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
+.+..+...|++++|+..+++++.. .|.+ .. ++..++.+|..+|++++|++++++++..
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~-----~p~~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQT-----EPVG---KDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHH-----CSST---HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 4556677889999999999998764 3433 34 6788999999999999999999999864
No 190
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=96.93 E-value=0.00068 Score=59.98 Aligned_cols=57 Identities=12% Similarity=-0.004 Sum_probs=41.0
Q ss_pred cccccCCCc---cCcEEEEeCCEEEEEEccCCCCCCeeEEeccCCCCCHHHHHHHHhcCCCeEeeccccC
Q 017649 96 ISIINHSCL---PNAVLVFEGRLAVVRAVQHVPKGAEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCI 162 (368)
Q Consensus 96 ~s~~nHsC~---PN~~~~~~~~~~~~~a~~~i~~geel~~~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~ 162 (368)
+.++||+|. +|+...-.++.+.++|+|+|++|+||++-|.+.++. ..+-.|.++.|.
T Consensus 141 mRfVn~Ar~~~EqNL~A~q~~~~Iyy~a~RdI~pGeELlVwYg~~Y~~----------~l~~~~~~~~~~ 200 (237)
T 3ray_A 141 MRYVVISREEREQNLLAFQHSERIYFRACRDIRPGEWLRVWYSEDYMK----------RLHSMSQETIHR 200 (237)
T ss_dssp GGGCEECCCTTTCCEEEEEETTEEEEEESSCBCTTCBCEEEECHHHHH----------HHCC--------
T ss_pred eeEEEcCCCcccccceeEEeCCEEEEEEccccCCCCEEEEeeCHHHHH----------Hhcccccchhcc
Confidence 468899996 698888788999999999999999999999987642 233456666663
No 191
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.90 E-value=0.0016 Score=48.72 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...++.++...|++++|+.++++++... +.+ ...++.+|.++..+|++++|+..+++|+++
T Consensus 9 ~~~~~~~~~~~~~~~~A~~~~~~a~~~~-----~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~ 69 (112)
T 2kck_A 9 YYLEGVLQYDAGNYTESIDLFEKAIQLD-----PEE---SKYWLMKGKALYNLERYEEAVDCYNYVINV 69 (112)
T ss_dssp GGGHHHHHHSSCCHHHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhC-----cCC---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4568889999999999999999988742 233 346789999999999999999999999976
No 192
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.90 E-value=0.007 Score=45.41 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
......++..+...|+|++|+.++++++... |.+ ...++.+|.++...|++++|+..+++++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLD-----PHN---HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-----CCc---HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 3456778899999999999999999988642 333 356788999999999999999999999986
No 193
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=96.88 E-value=0.0066 Score=45.99 Aligned_cols=64 Identities=22% Similarity=0.332 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..+...++.++...|++++|++++++++... +.+ ...++.+|.++...|++++|+.++++++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-----~~~---~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 72 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-----PNN---AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-----TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----cCc---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 4566788999999999999999999988642 233 356789999999999999999999999875
No 194
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.87 E-value=0.0074 Score=47.24 Aligned_cols=68 Identities=10% Similarity=-0.055 Sum_probs=55.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCch
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPF 344 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~ 344 (368)
...++..+...|++++|+..+++++... |.+ ...++.+|.++...|++++|+..+++|+++ .|+++.
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~-----P~~---~~a~~~lg~~~~~~g~~~~A~~~~~~al~l-----~P~~~~ 86 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKE-----PER---EEAWRSLGLTQAENEKDGLAIIALNHARML-----DPKDIA 86 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS-----TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCCHH
Confidence 4567888999999999999999988732 333 456789999999999999999999999985 455554
Q ss_pred H
Q 017649 345 M 345 (368)
Q Consensus 345 ~ 345 (368)
.
T Consensus 87 ~ 87 (121)
T 1hxi_A 87 V 87 (121)
T ss_dssp H
T ss_pred H
Confidence 3
No 195
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.79 E-value=0.0021 Score=49.80 Aligned_cols=62 Identities=19% Similarity=0.095 Sum_probs=48.0
Q ss_pred hhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 274 ELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 274 ~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
.+|++++|+.++++++.. ++.+|.....++++|.++..+|++++|+..+++|+++ .|+++.+
T Consensus 2 ~~g~~~~A~~~~~~al~~-----~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~ 63 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIAS-----GLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQ-----FPNHQAL 63 (117)
T ss_dssp -----CCCHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTCHHH
T ss_pred CCCcHHHHHHHHHHHHHc-----CCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCchHH
Confidence 468899999999998873 3447888899999999999999999999999999986 4555433
No 196
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.77 E-value=0.0053 Score=55.84 Aligned_cols=69 Identities=14% Similarity=-0.000 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 260 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
.-..++.+|+.++...|++++|+..+++++... | .+ .-+..+.+||.++..+|+.++|+..+++++..+
T Consensus 217 ~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~----p-~~-~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~~~ 285 (287)
T 3qou_A 217 EDAALATQLALQLHQVGRNEEALELLFGHLRXD----L-TA-ADGQTRXTFQEILAALGTGDALASXYRRQLYAL 285 (287)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----T-TG-GGGHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcc----c-cc-ccchHHHHHHHHHHHcCCCCcHHHHHHHHHHHh
Confidence 344568899999999999999999999988742 2 22 124667899999999999999999999998754
No 197
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.70 E-value=0.0076 Score=45.31 Aligned_cols=63 Identities=16% Similarity=0.092 Sum_probs=51.3
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 293 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e 293 (368)
....+..+...|++++|+..+++++++ .|.++ .++..++.+|..+|++++|++.+++++....
T Consensus 10 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~~---~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~ 72 (100)
T 3ma5_A 10 RYALAQEHLKHDNASRALALFEELVET-----DPDYV---GTYYHLGKLYERLDRTDDAIDTYAQGIEVAR 72 (100)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTCT---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhhh
Confidence 445666777899999999999998875 34333 4678899999999999999999999998654
No 198
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.65 E-value=0.0063 Score=51.53 Aligned_cols=88 Identities=8% Similarity=-0.139 Sum_probs=66.9
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
......+..+...|++++|+..+++++.+ .|. ...++..++.+|..+|++++|+.++++++.. .|.+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~-----~p~---~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~-----~p~~ 155 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKI-----DKN---NVKALYKLGVANMYFGFLEEAKENLYKAASL-----NPNN 155 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STT---CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH-----STTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHh-----Ccc---cHHHHHHHHHHHHHcccHHHHHHHHHHHHHH-----CCCc
Confidence 34556677788899999999999998875 333 3467788999999999999999999998865 2334
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAI 324 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~ 324 (368)
+ ..+..++.++..+++..++.
T Consensus 156 ~---~~~~~l~~~~~~~~~~~~~~ 176 (198)
T 2fbn_A 156 L---DIRNSYELCVNKLKEARKKD 176 (198)
T ss_dssp H---HHHHHHHHHHHHHHHHHC--
T ss_pred H---HHHHHHHHHHHHHHHHHHHH
Confidence 3 45677888888888777776
No 199
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.62 E-value=0.0052 Score=55.75 Aligned_cols=64 Identities=20% Similarity=0.188 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+..++..+...|+|++|+.++++++.. +|.....++++|.++..+|++++|+..+++|+++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~--------~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 67 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITR--------NPLVAVYYTNRALCYLKMQQPEQALADCRRALEL 67 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--------CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--------CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 455678899999999999999999999874 2334567889999999999999999999999975
No 200
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.60 E-value=0.0078 Score=50.04 Aligned_cols=67 Identities=13% Similarity=-0.027 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
..++..++.++...|++++|+..+++++.. .|... -...+..+|.++..+|+.++|+..|++++.-+
T Consensus 108 ~~~~~~la~~~~~~g~~~~A~~~~~~~l~~----~p~~~--~~~a~~~l~~~~~~~g~~~~A~~~y~~al~~~ 174 (176)
T 2r5s_A 108 FELACELAVQYNQVGRDEEALELLWNILKV----NLGAQ--DGEVKKTFMDILSALGQGNAIASKYRRQLYSI 174 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT----CTTTT--TTHHHHHHHHHHHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHh----CcccC--hHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence 456788999999999999999999988763 22211 12456789999999999999999999998643
No 201
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=96.59 E-value=0.0081 Score=58.63 Aligned_cols=90 Identities=6% Similarity=-0.029 Sum_probs=70.2
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCC
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFH 300 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~h 300 (368)
....+.+..+...|++++|+..+.+++.+ .|.+ ..++.+++.+|..+|+|++|+..+++++.. .
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--------~ 381 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDKALGL-----DSAN---EKGLYRRGEAQLLMNEFESAKGDFEKVLEV--------N 381 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----STTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--------C
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhc-----CCcc---HHHHHHHHHHHHHccCHHHHHHHHHHHHHh--------C
Confidence 34456677788889999999999999875 2333 567889999999999999999999999874 2
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHH
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKS 326 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~ 326 (368)
|.-...+..++.++..++++++|.+.
T Consensus 382 P~~~~a~~~l~~~~~~~~~~~~a~~~ 407 (457)
T 1kt0_A 382 PQNKAARLQISMCQKKAKEHNERDRR 407 (457)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345678899999999998887754
No 202
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.55 E-value=0.0084 Score=51.79 Aligned_cols=30 Identities=10% Similarity=-0.148 Sum_probs=16.0
Q ss_pred HHHHHhhhhhHhhh----cCChHHHHHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWF----LGDTENAIKSMTEAVE 332 (368)
Q Consensus 303 ~~~~l~~La~l~~~----~g~~~eA~~~l~kAl~ 332 (368)
....+++||.++.. .+++++|+.++++|.+
T Consensus 124 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~ 157 (212)
T 3rjv_A 124 AVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSS 157 (212)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 34555555555555 4455555555555544
No 203
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=96.49 E-value=0.024 Score=51.65 Aligned_cols=83 Identities=11% Similarity=0.036 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 316 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~ 316 (368)
++|+..+++++.. ++|.+ ..+...++.++...|++++|...+++++.. +|.++.. .+.++|.++..
T Consensus 81 ~~A~~~~~rAl~~----~~p~~---~~~~~~~~~~~~~~~~~~~A~~~~~~al~~-----~p~~~~~--~~~~~~~~~~~ 146 (308)
T 2ond_A 81 DEAANIYERAIST----LLKKN---MLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPTL--VYIQYMKFARR 146 (308)
T ss_dssp HHHHHHHHHHHTT----TTTTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS-----SSSCTHH--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCccc---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc-----cccCccH--HHHHHHHHHHH
Confidence 7888888877652 23443 345677888888999999999999998873 4455532 56777888888
Q ss_pred cCChHHHHHHHHHHHHh
Q 017649 317 LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 317 ~g~~~eA~~~l~kAl~i 333 (368)
.|++++|+..|++|++.
T Consensus 147 ~~~~~~A~~~~~~a~~~ 163 (308)
T 2ond_A 147 AEGIKSGRMIFKKARED 163 (308)
T ss_dssp HHCHHHHHHHHHHHHTS
T ss_pred hcCHHHHHHHHHHHHhc
Confidence 88888998888888864
No 204
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.48 E-value=0.011 Score=56.20 Aligned_cols=72 Identities=15% Similarity=0.217 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhh--------cCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRV--------YPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~--------~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...+..++..+...|+|++|+.++++++...... ....+|.....++++|.++..+|++++|+.++++|+++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 3456678999999999999999999999866542 11256778889999999999999999999999999985
No 205
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.24 E-value=0.039 Score=47.47 Aligned_cols=63 Identities=14% Similarity=0.007 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHh----hhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhc-C-----ChHHHHHHHHHHH
Q 017649 262 MQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-G-----DTENAIKSMTEAV 331 (368)
Q Consensus 262 ~~~~~~La~~~~~----~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~-g-----~~~eA~~~l~kAl 331 (368)
..+..+|+.+|.. .+++++|+.+++++++ . +.++. .+++||.++... | ++++|+.+|++|.
T Consensus 125 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~-----~-~~~~~---a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~ 195 (212)
T 3rjv_A 125 VDAQMLLGLIYASGVHGPEDDVKASEYFKGSSS-----L-SRTGY---AEYWAGMMFQQGEKGFIEPNKQKALHWLNVSC 195 (212)
T ss_dssp HHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHH-----T-SCTTH---HHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH-----c-CCCHH---HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHH
Confidence 5555555555555 4555555555555543 0 34433 456666666543 2 5667777777666
Q ss_pred Hh
Q 017649 332 EI 333 (368)
Q Consensus 332 ~i 333 (368)
+.
T Consensus 196 ~~ 197 (212)
T 3rjv_A 196 LE 197 (212)
T ss_dssp HH
T ss_pred Hc
Confidence 53
No 206
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=96.22 E-value=0.0095 Score=55.64 Aligned_cols=95 Identities=7% Similarity=-0.137 Sum_probs=50.8
Q ss_pred HHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCCh
Q 017649 222 ILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHP 301 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp 301 (368)
...+.+..+...|++++|+..+++++.+ .|.+ ..++.+++.+|..+|+|++|+.++++++... |.++
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~-----p~~~ 298 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHCNIVLTE-----EEKN---PKALFRRGKAKAELGQMDSARDDFRKAQKYA-----PDDK 298 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-----CCCH
Confidence 3456677788899999999999998875 3333 5678899999999999999999999998753 3343
Q ss_pred HHHHHHhhhhhHh-hhcCChHHHHHHHHHHHH
Q 017649 302 LLGLQYYTCGKLE-WFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 302 ~~~~~l~~La~l~-~~~g~~~eA~~~l~kAl~ 332 (368)
..+..|+.+. ...+..+++...|.+++.
T Consensus 299 ---~a~~~L~~l~~~~~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 299 ---AIRRELRALAEQEKALYQKQKEMYKGIFK 327 (338)
T ss_dssp --------------------------------
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 3445666663 344666777778877765
No 207
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=96.14 E-value=0.094 Score=39.69 Aligned_cols=75 Identities=7% Similarity=-0.096 Sum_probs=56.9
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
-++.+..++..|+|..|+..++.++.....--. .......++..|+.++..+|++++|+.+.++++. +.|.|+.
T Consensus 8 c~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~-~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~-----l~P~~~~ 81 (104)
T 2v5f_A 8 CFELGKVAYTEADYYHTELWMEQALRQLDEGEI-STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE-----LDPEHQR 81 (104)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC-CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----HCTTCHH
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHhhhccCC-CcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh-----cCCCCHH
Confidence 345566778899999999999999876432110 1234567789999999999999999999999886 3567765
Q ss_pred H
Q 017649 303 L 303 (368)
Q Consensus 303 ~ 303 (368)
.
T Consensus 82 ~ 82 (104)
T 2v5f_A 82 A 82 (104)
T ss_dssp H
T ss_pred H
Confidence 5
No 208
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.98 E-value=0.04 Score=41.90 Aligned_cols=63 Identities=11% Similarity=-0.029 Sum_probs=51.3
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 293 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e 293 (368)
....+..+...|++++|+..+++++.. .|.+ ..++..++.++..+|++++|+.++++++....
T Consensus 22 ~~~lg~~~~~~g~~~~A~~~~~~al~~-----~p~~---~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 84 (115)
T 2kat_A 22 RFTLGKTYAEHEQFDAALPHLRAALDF-----DPTY---SVAWKWLGKTLQGQGDRAGARQAWESGLAAAQ 84 (115)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHH-----CCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcc
Confidence 445666777899999999999998865 2333 45678899999999999999999999988654
No 209
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=95.94 E-value=0.099 Score=43.01 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=66.9
Q ss_pred cHHHHHHHHHHHHHhhh---hHHHHHHHHHhhhhhHHhhcCCCCh-HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 260 NLMQTREKLIKILMELE---DWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g---~~~~Al~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
...++..+++.++...+ ++.+++.+++.++..- +| ..--.+|.||..+..+|+|++|+.++++++++
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~i-- 100 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT-- 100 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH--
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--
Confidence 34677888888888865 8889999888877632 35 34567899999999999999999999999974
Q ss_pred cccCCCCchHHHHHHHHHHHH
Q 017649 336 ITHGTNSPFMKELILKLEEAQ 356 (368)
Q Consensus 336 ~~~G~~hp~~~~l~~~L~~~~ 356 (368)
-|+|+....+...+++..
T Consensus 101 ---eP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 101 ---EPQNNQAKELERLIDKAM 118 (152)
T ss_dssp ---CTTCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHH
Confidence 578888888777765543
No 210
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.91 E-value=0.049 Score=49.54 Aligned_cols=98 Identities=10% Similarity=-0.067 Sum_probs=58.9
Q ss_pred HhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH-------------h-
Q 017649 229 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ-------------R- 294 (368)
Q Consensus 229 ~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e-------------~- 294 (368)
.....|++++|...|++++. ++|.++.. +..+++.++...|++++|...+++++..-. .
T Consensus 108 ~~~~~~~~~~A~~~~~~al~-----~~p~~~~~--~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~ 180 (308)
T 2ond_A 108 YEESRMKYEKVHSIYNRLLA-----IEDIDPTL--VYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYY 180 (308)
T ss_dssp HHHHTTCHHHHHHHHHHHHT-----SSSSCTHH--HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHh-----ccccCccH--HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 34456788888888887765 24444421 456677777777777777777777654210 0
Q ss_pred hcCC-------------CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 295 VYPQ-------------FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 295 ~~g~-------------~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..|. .+|.-...+..+|.++..+|++++|+..|++|+..
T Consensus 181 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 181 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHS
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 0000 01122334456677777778888888888888764
No 211
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.86 E-value=0.061 Score=43.01 Aligned_cols=85 Identities=15% Similarity=0.104 Sum_probs=66.4
Q ss_pred HhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh----hhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 229 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 229 ~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~----~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
.+...+..++|++.++++.+. ....+..+|+.+|.. .+++++|+++++++.+. .+ .
T Consensus 34 ~y~~g~~~~~A~~~~~~Aa~~----------g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~-------g~---~ 93 (138)
T 1klx_A 34 VSNSQINKQKLFQYLSKACEL----------NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL-------ND---Q 93 (138)
T ss_dssp HTCTTSCHHHHHHHHHHHHHT----------TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-------TC---H
T ss_pred HHHcCCCHHHHHHHHHHHHcC----------CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC-------CC---H
Confidence 344445677788888877653 124677889999988 78999999999998762 23 3
Q ss_pred HHHhhhhhHhhh----cCChHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWF----LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 305 ~~l~~La~l~~~----~g~~~eA~~~l~kAl~i 333 (368)
..+++||.++.. .+++++|+.++++|.+.
T Consensus 94 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 94 DGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 567899999988 89999999999999874
No 212
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.74 E-value=0.059 Score=40.28 Aligned_cols=82 Identities=9% Similarity=0.012 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhhh---HHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccC
Q 017649 263 QTREKLIKILMELED---WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHG 339 (368)
Q Consensus 263 ~~~~~La~~~~~~g~---~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G 339 (368)
..+..++.++...++ .++|..++++++. .-|.++ ..++.+|.++...|++++|+.+++++++. .
T Consensus 7 ~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~-----~dp~~~---rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~-----~ 73 (93)
T 3bee_A 7 TQLAAKATTLYYLHKQAMTDEVSLLLEQALQ-----LEPYNE---AALSLIANDHFISFRFQEAIDTWVLLLDS-----N 73 (93)
T ss_dssp HHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH-----HCTTCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHTC-----C
T ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH-----HCcCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----C
Confidence 345556666654444 6899999999887 234444 55677899999999999999999998863 3
Q ss_pred CCCchHHHHHHHHHHHHH
Q 017649 340 TNSPFMKELILKLEEAQA 357 (368)
Q Consensus 340 ~~hp~~~~l~~~L~~~~~ 357 (368)
|+.|....+...+++++.
T Consensus 74 p~~~~~~~i~~~I~~A~~ 91 (93)
T 3bee_A 74 DPNLDRVTIIESINKAKK 91 (93)
T ss_dssp CTTCCHHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHh
Confidence 336666677777766654
No 213
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=95.71 E-value=0.13 Score=42.78 Aligned_cols=104 Identities=13% Similarity=0.152 Sum_probs=71.8
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhc---ccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKK---LYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~---~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
+.+....+...|-|+.|+-+...++.+... ++.| ..-.+++..+|.++...|+|.+|..++++++...+.+.-..
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp--~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~ 100 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSP--PQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTS 100 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCH--HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccH--HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCC
Confidence 334444556778899998888877665422 2222 12346677899999999999999999999998876432111
Q ss_pred C-----------------hHHHHHHhhhhhHhhhcCChHHHHHHHH
Q 017649 300 H-----------------PLLGLQYYTCGKLEWFLGDTENAIKSMT 328 (368)
Q Consensus 300 h-----------------p~~~~~l~~La~l~~~~g~~~eA~~~l~ 328 (368)
. +.-.-..|++|..+..++++++|+..++
T Consensus 101 s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le 146 (167)
T 3ffl_A 101 KVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILD 146 (167)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 0 1112466889999999999999988754
No 214
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.54 E-value=0.16 Score=48.47 Aligned_cols=123 Identities=7% Similarity=0.037 Sum_probs=82.5
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhc-ccCCc-c------------ccHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKK-LYHPF-S------------VNLMQTREKLIKILMELEDWKEALAYCQ 286 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~-~l~~~-h------------~~l~~~~~~La~~~~~~g~~~~Al~~~~ 286 (368)
+.+...+......|+.++|...+..++.+.+. .|... . ...+.+...++.++...|++.+|+..+.
T Consensus 116 ~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~ 195 (388)
T 2ff4_A 116 VAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELE 195 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 34444444445667888888888888887543 22211 1 1122345556777778899999998887
Q ss_pred hhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC-CchHHHHHHH
Q 017649 287 LTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN-SPFMKELILK 351 (368)
Q Consensus 287 ~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~-hp~~~~l~~~ 351 (368)
.++.. ||..-..+..|-.++...|+..+|+..|++.-+.+...+|-+ .|.+.++...
T Consensus 196 ~~~~~--------~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~ 253 (388)
T 2ff4_A 196 ALTFE--------HPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNER 253 (388)
T ss_dssp HHHHH--------STTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHH
T ss_pred HHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 77542 233223344555567889999999999999999999999976 4566665544
No 215
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.86 E-value=0.42 Score=45.64 Aligned_cols=107 Identities=18% Similarity=0.055 Sum_probs=84.1
Q ss_pred HHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH-
Q 017649 225 KKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL- 303 (368)
Q Consensus 225 ~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~- 303 (368)
..+.-+...|+|.+|.+++.+++.-..++ + +...++.+.-.-.++|..++++.++..++..+..+...++ .||.+
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~-d-d~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p~i~ 179 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKL-D-DKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY--CPPKVQ 179 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTS-S-CTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcc-c-cchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC--CCHHHH
Confidence 45566789999999999998887765543 2 2456677777788899999999999999999988877665 66765
Q ss_pred HHHHhhhhhHhh-hcCChHHHHHHHHHHHHhhc
Q 017649 304 GLQYYTCGKLEW-FLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 304 ~~~l~~La~l~~-~~g~~~eA~~~l~kAl~i~~ 335 (368)
|.....-|.++. ..++|.+|-.+|-+|..-+.
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHHHHhccc
Confidence 555556677777 79999999999999976554
No 216
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=94.50 E-value=0.24 Score=48.04 Aligned_cols=48 Identities=19% Similarity=0.081 Sum_probs=25.8
Q ss_pred cCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh----hhhHHHHHHHHHhhhh
Q 017649 233 CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIP 290 (368)
Q Consensus 233 ~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~----~g~~~~Al~~~~~~l~ 290 (368)
.+++++|+..++++... .+ ..+...|+.+|.. .+++++|+.+++++.+
T Consensus 92 ~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 92 PQDYAQAVIWYKKAALK-------GL---PQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp CCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 55666666666665432 11 2334455555555 4566666666655543
No 217
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=94.49 E-value=0.074 Score=44.12 Aligned_cols=48 Identities=8% Similarity=0.063 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhh-----------hHHHHHHHHHhhhhh
Q 017649 236 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----------DWKEALAYCQLTIPV 291 (368)
Q Consensus 236 ~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g-----------~~~~Al~~~~~~l~~ 291 (368)
+++|+..+++++++ ++....++.+|+.+|..+| +|++|++++++++++
T Consensus 62 ~~eAi~~le~AL~l--------dP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l 120 (158)
T 1zu2_A 62 IQEAITKFEEALLI--------DPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDE 120 (158)
T ss_dssp HHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh--------CcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHh
Confidence 45888888888765 3445667889999998875 899999999999875
No 218
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=94.38 E-value=0.29 Score=47.51 Aligned_cols=92 Identities=11% Similarity=0.003 Sum_probs=66.5
Q ss_pred HHHHHHHHHhhh----cCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh----hhhHHHHHHHHHhhhhhH
Q 017649 221 NILSKKTLALTS----CGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME----LEDWKEALAYCQLTIPVY 292 (368)
Q Consensus 221 ~~l~~~a~~~~~----~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~----~g~~~~Al~~~~~~l~~~ 292 (368)
......+..+.. .+++++|+..++++.+. .+ ..+...|+.+|.. .+++++|+++++++.+.
T Consensus 40 ~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~-------~~---~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~- 108 (490)
T 2xm6_A 40 KAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ-------GY---TPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK- 108 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-------TC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC-------CC---HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC-
Confidence 334444444555 78999999999988653 12 4567889999998 89999999999998752
Q ss_pred HhhcCCCChHHHHHHhhhhhHhhh----cCChHHHHHHHHHHHH
Q 017649 293 QRVYPQFHPLLGLQYYTCGKLEWF----LGDTENAIKSMTEAVE 332 (368)
Q Consensus 293 e~~~g~~hp~~~~~l~~La~l~~~----~g~~~eA~~~l~kAl~ 332 (368)
.++ ..++.||.++.. .+++++|+.++++|.+
T Consensus 109 ------~~~---~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 109 ------GLP---QAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp ------TCH---HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred ------CCH---HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 233 445667777776 6777788888777765
No 219
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=94.05 E-value=0.66 Score=45.40 Aligned_cols=55 Identities=13% Similarity=0.015 Sum_probs=36.8
Q ss_pred HhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhh
Q 017649 229 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 290 (368)
Q Consensus 229 ~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~ 290 (368)
.....|++++|..++++++.+ +|.++. .+...++..+...|++++|.+++++++.
T Consensus 330 ~~~~~g~~~~A~~~~~~al~~-----~p~~~~--~~~~~~~~~~~~~~~~~~A~~~~~~Al~ 384 (530)
T 2ooe_A 330 YEESRMKYEKVHSIYNRLLAI-----EDIDPT--LVYIQYMKFARRAEGIKSGRMIFKKARE 384 (530)
T ss_dssp HHHHTTCHHHHHHHHHHHHHS-----SSSCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCHHHHHHHHHHHhCc-----cccCch--HHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 344568888998888888763 343321 2455666667777777777777777664
No 220
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=93.72 E-value=0.16 Score=40.42 Aligned_cols=77 Identities=10% Similarity=-0.002 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHh
Q 017649 235 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 314 (368)
Q Consensus 235 ~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~ 314 (368)
++++|++.++++.+.- ++.- . |+.+|...+.+++|+++++++.+. .++ ..+++||.++
T Consensus 10 d~~~A~~~~~~aa~~g-------~~~a---~--lg~~y~~g~~~~~A~~~~~~Aa~~-------g~~---~a~~~Lg~~y 67 (138)
T 1klx_A 10 DLKKAIQYYVKACELN-------EMFG---C--LSLVSNSQINKQKLFQYLSKACEL-------NSG---NGCRFLGDFY 67 (138)
T ss_dssp HHHHHHHHHHHHHHTT-------CTTH---H--HHHHTCTTSCHHHHHHHHHHHHHT-------TCH---HHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCC-------CHhh---h--HHHHHHcCCCHHHHHHHHHHHHcC-------CCH---HHHHHHHHHH
Confidence 5677888887775431 2221 1 888888888899999999998763 333 6789999999
Q ss_pred hh----cCChHHHHHHHHHHHHh
Q 017649 315 WF----LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 315 ~~----~g~~~eA~~~l~kAl~i 333 (368)
.. .+++++|+.++++|.+.
T Consensus 68 ~~G~g~~~d~~~A~~~~~~Aa~~ 90 (138)
T 1klx_A 68 ENGKYVKKDLRKAAQYYSKACGL 90 (138)
T ss_dssp HHCSSSCCCHHHHHHHHHHHHHT
T ss_pred HcCCCCCccHHHHHHHHHHHHcC
Confidence 88 88999999999999863
No 221
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=93.40 E-value=0.49 Score=46.35 Aligned_cols=87 Identities=11% Similarity=0.052 Sum_probs=62.3
Q ss_pred cCChH-------HHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 233 CGNHQ-------EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 233 ~g~~~-------eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
.|+++ +|+..+++++.. ..|.+ ..+...++.++...|++++|...+++++.. +|.+|. .
T Consensus 292 ~g~~~~a~~~~~~A~~~~~~Al~~----~~p~~---~~l~~~~~~~~~~~g~~~~A~~~~~~al~~-----~p~~~~--~ 357 (530)
T 2ooe_A 292 KGDMNNAKLFSDEAANIYERAIST----LLKKN---MLLYFAYADYEESRMKYEKVHSIYNRLLAI-----EDIDPT--L 357 (530)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTT----TCSSC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS-----SSSCHH--H
T ss_pred ccchhhhhhhhHHHHHHHHHHHHH----hCccc---HHHHHHHHHHHHhcCCHHHHHHHHHHHhCc-----cccCch--H
Confidence 68876 777777766531 22333 455677888899999999999999998873 455443 3
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
.+..+|.++...|++++|+..|++|++.
T Consensus 358 ~~~~~~~~~~~~~~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 358 VYIQYMKFARRAEGIKSGRMIFKKARED 385 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 5566677777778888888888888763
No 222
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=93.33 E-value=0.55 Score=43.27 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=65.6
Q ss_pred ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhh-----cCCCChHHHHHHhh
Q 017649 235 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-----YPQFHPLLGLQYYT 309 (368)
Q Consensus 235 ~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~-----~g~~hp~~~~~l~~ 309 (368)
++++|...|+.+... + |. ......+.+ +++.+|+|++|.+.++.++..+-.+ ..+++|.+ +.+
T Consensus 193 ~~q~A~~~f~El~~~----~-p~-~~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~---LaN 260 (310)
T 3mv2_B 193 TATSNFYYYEELSQT----F-PT-WKTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTF---LAN 260 (310)
T ss_dssp TTTHHHHHHHHHHTT----S-CS-HHHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHH---HHH
T ss_pred cHHHHHHHHHHHHHh----C-CC-cccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHH---HHH
Confidence 788888888775332 2 21 111122222 7899999999999888666554221 12556655 566
Q ss_pred hhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHH
Q 017649 310 CGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILK 351 (368)
Q Consensus 310 La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~ 351 (368)
+..+...+|+ +|..++.++.+ .-|+||.+.++..+
T Consensus 261 ~i~l~~~lgk--~a~~l~~qL~~-----~~P~hp~i~d~~~k 295 (310)
T 3mv2_B 261 QITLALMQGL--DTEDLTNQLVK-----LDHEHAFIKHHQEI 295 (310)
T ss_dssp HHHHHHHTTC--TTHHHHHHHHH-----TTCCCHHHHHHHHH
T ss_pred HHHHHHHhCh--HHHHHHHHHHH-----hCCCChHHHHHHHH
Confidence 6667777787 88888888876 35999999998866
No 223
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.26 E-value=0.28 Score=54.04 Aligned_cols=95 Identities=9% Similarity=-0.009 Sum_probs=67.4
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH---------
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ--------- 293 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e--------- 293 (368)
....+..+.+.|++++|...|.++ .....++.++..+|++++|++.++++....-
T Consensus 1198 ~~~iGd~le~eg~YeeA~~~Y~kA----------------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acv 1261 (1630)
T 1xi4_A 1198 IQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACV 1261 (1630)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHhh----------------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 445677788888999998888764 2455688889999999999999988754321
Q ss_pred --------hhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 294 --------RVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 294 --------~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
...|-.-..-+..+..++..|...|.+++|+.++++|+.+
T Consensus 1262 e~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~L 1309 (1630)
T 1xi4_A 1262 DGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGL 1309 (1630)
T ss_pred hhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhcc
Confidence 0112111111234557788888999999999999999653
No 224
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=93.16 E-value=0.4 Score=46.33 Aligned_cols=86 Identities=16% Similarity=0.108 Sum_probs=45.4
Q ss_pred HHHhhhcC---ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh----hhHHHHHHHHHhhhhhHHhhcCCC
Q 017649 227 TLALTSCG---NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL----EDWKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 227 a~~~~~~g---~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~----g~~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
+..+...| ++++|+..++++... ++ .......+|+.+|... +++++|+++++++. +.
T Consensus 183 g~~~~~~g~~~~~~~A~~~~~~aa~~-----g~---~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa--------~g 246 (452)
T 3e4b_A 183 ATVYQKKQQPEQQAELLKQMEAGVSR-----GT---VTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA--------PG 246 (452)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHT-----TC---SCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG--------GG
T ss_pred HHHHHHcCCcccHHHHHHHHHHHHHC-----CC---HHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc--------CC
Confidence 33444456 677777777666542 11 1222334566666443 46666666666553 12
Q ss_pred ChHHHHHHhhhhhH-h--hhcCChHHHHHHHHHHH
Q 017649 300 HPLLGLQYYTCGKL-E--WFLGDTENAIKSMTEAV 331 (368)
Q Consensus 300 hp~~~~~l~~La~l-~--~~~g~~~eA~~~l~kAl 331 (368)
+| ..+++||.+ + ...+++++|+.+|++|.
T Consensus 247 ~~---~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa 278 (452)
T 3e4b_A 247 YP---ASWVSLAQLLYDFPELGDVEQMMKYLDNGR 278 (452)
T ss_dssp ST---HHHHHHHHHHHHSGGGCCHHHHHHHHHHHH
T ss_pred CH---HHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 22 344555555 2 34556666666666655
No 225
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.11 E-value=0.44 Score=35.34 Aligned_cols=63 Identities=10% Similarity=-0.116 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhh
Q 017649 236 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 311 (368)
Q Consensus 236 ~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La 311 (368)
..+|..++++++.. ++.-.+++..++..+...|+|.+|+.+++++++. .|+ .|.+......+.
T Consensus 25 ~~~A~~~l~~AL~~--------dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~----~p~-~~~~~~i~~~I~ 87 (93)
T 3bee_A 25 TDEVSLLLEQALQL--------EPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS----NDP-NLDRVTIIESIN 87 (93)
T ss_dssp CHHHHHHHHHHHHH--------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC----CCT-TCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH--------CcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----CCC-CccHHHHHHHHH
Confidence 68999999998874 3444567778999999999999999999998863 344 555544444433
No 226
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=92.88 E-value=0.21 Score=48.45 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHh
Q 017649 215 KIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 294 (368)
Q Consensus 215 ~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~ 294 (368)
..-..+......|..+...|++++|++.++++. + ..+...+..++...|+|+.|......++
T Consensus 143 ~~Y~~a~n~~~LA~~L~~Lg~yq~AVea~~KA~----------~---~~~Wk~v~~aCv~~~ef~lA~~~~l~L~----- 204 (449)
T 1b89_A 143 LLYNNVSNFGRLASTLVHLGEYQAAVDGARKAN----------S---TRTWKEVCFACVDGKEFRLAQMCGLHIV----- 204 (449)
T ss_dssp HHHHHTTCHHHHHHHHHTTTCHHHHHHHHHHHT----------C---HHHHHHHHHHHHHTTCHHHHHHTTTTTT-----
T ss_pred HHHHHhhhHHHHHHHHHHhccHHHHHHHHHHcC----------C---chhHHHHHHHHHHcCcHHHHHHHHHHHH-----
Confidence 333444555667778888899999999888761 1 3455677888999999999965544311
Q ss_pred hcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 295 VYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 295 ~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
.||.- +..+..+|...|++++|+.++++++.+=
T Consensus 205 ----~~ad~---l~~lv~~Yek~G~~eEai~lLe~aL~le 237 (449)
T 1b89_A 205 ----VHADE---LEELINYYQDRGYFEELITMLEAALGLE 237 (449)
T ss_dssp ----TCHHH---HHHHHHHHHHTTCHHHHHHHHHHHTTST
T ss_pred ----hCHhh---HHHHHHHHHHCCCHHHHHHHHHHHhCCc
Confidence 34443 3357778889999999999999998543
No 227
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.62 E-value=0.39 Score=53.01 Aligned_cols=96 Identities=16% Similarity=0.061 Sum_probs=65.1
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhh--c-cc------C-----CccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQK--K-LY------H-----PFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~--~-~l------~-----~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
.|..+...|.+++|..+|+++..... . ++ . ........+...+|.++...|+|++|++.+.++
T Consensus 1055 IA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA--- 1131 (1630)
T 1xi4_A 1055 IANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA--- 1131 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc---
Confidence 45566777888888877776421100 0 00 0 012233456778889999999999998887664
Q ss_pred HHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 292 YQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 292 ~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
++| ..++++|..+..+|++++|+++|..|....
T Consensus 1132 -------dD~---say~eVa~~~~~lGkyEEAIeyL~mArk~~ 1164 (1630)
T 1xi4_A 1132 -------DDP---SSYMEVVQAANTSGNWEELVKYLQMARKKA 1164 (1630)
T ss_pred -------CCh---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhc
Confidence 222 345678889999999999999999888754
No 228
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=92.15 E-value=0.85 Score=37.88 Aligned_cols=70 Identities=20% Similarity=0.150 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCc-----------------cccHHHHHHHHHHHHHhhhhHHH
Q 017649 218 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPF-----------------SVNLMQTREKLIKILMELEDWKE 280 (368)
Q Consensus 218 ~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~-----------------h~~l~~~~~~La~~~~~~g~~~~ 280 (368)
.+.+.+.-.|+.++.+|+|..|...|++++...+.+.-.. -..=.+++..++.+|..++++.+
T Consensus 61 ~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 61 QKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 3456677788889999999999999999988765432111 11123688999999999999999
Q ss_pred HHHHHHh
Q 017649 281 ALAYCQL 287 (368)
Q Consensus 281 Al~~~~~ 287 (368)
|+.+.+.
T Consensus 141 Ai~~Le~ 147 (167)
T 3ffl_A 141 AIAILDG 147 (167)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9998554
No 229
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=91.55 E-value=1.1 Score=43.07 Aligned_cols=80 Identities=14% Similarity=0.036 Sum_probs=51.1
Q ss_pred hhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhh-----hHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 231 TSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-----DWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 231 ~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g-----~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
...+++++|+..++++.+.. ...+..+|+.+|. .| ++++|+.+++++. +.+| .
T Consensus 262 ~~~~d~~~A~~~~~~Aa~~g----------~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa--------~g~~---~ 319 (452)
T 3e4b_A 262 PELGDVEQMMKYLDNGRAAD----------QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV--------GREV---A 319 (452)
T ss_dssp GGGCCHHHHHHHHHHHHHTT----------CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT--------TTCH---H
T ss_pred CCCCCHHHHHHHHHHHHHCC----------CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh--------CCCH---H
Confidence 35678888888887765321 2345667777776 44 7888888877765 2233 4
Q ss_pred HHhhhhhHhhh----cCChHHHHHHHHHHHH
Q 017649 306 QYYTCGKLEWF----LGDTENAIKSMTEAVE 332 (368)
Q Consensus 306 ~l~~La~l~~~----~g~~~eA~~~l~kAl~ 332 (368)
.+++||.++.. ..++++|+.+|++|.+
T Consensus 320 A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~ 350 (452)
T 3e4b_A 320 ADYYLGQIYRRGYLGKVYPQKALDHLLTAAR 350 (452)
T ss_dssp HHHHHHHHHHTTTTSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHh
Confidence 55666766654 2366777777776654
No 230
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=91.46 E-value=1.4 Score=38.41 Aligned_cols=61 Identities=8% Similarity=-0.018 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhh-hcCChHHHHHHHHHHHHhhcc
Q 017649 276 EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 276 g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~-~~g~~~eA~~~l~kAl~i~~~ 336 (368)
|+-+.|...++.+.++...-+||.||.+.....|.+..+. .++..++|..+.++|+++.+.
T Consensus 139 g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~ 200 (227)
T 2o8p_A 139 CSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILEL 200 (227)
T ss_dssp SCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 5567889999999999988899999998666666766665 578999999999999997643
No 231
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.43 E-value=1.8 Score=41.53 Aligned_cols=103 Identities=6% Similarity=-0.113 Sum_probs=76.9
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
.+.|.-+...|++++|.+.+.++...... + ...+.+.-.+..++...++|..+..+..++..... ...+|.+
T Consensus 135 ~~la~~~~~~Gd~~~A~~~~~~~~~~~~~---~--~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~---~~~d~~~ 206 (429)
T 4b4t_R 135 INLGEYYAQIGDKDNAEKTLGKSLSKAIS---T--GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIE---KGGDWER 206 (429)
T ss_dssp HHHHHHHHHHCCCTTHHHHHHHHHHHHTC---C--CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT---TCCCTHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhcCC---h--HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhh---cCCCHHH
Confidence 34566677889999999999987765432 2 34567777888899999999999999988866543 3344544
Q ss_pred -HHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 304 -GLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 304 -~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
+.....-|.+++..++|.+|-.+|..+...+
T Consensus 207 ~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~ 238 (429)
T 4b4t_R 207 RNRYKTYYGIHCLAVRNFKEAAKLLVDSLATF 238 (429)
T ss_dssp HHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHhccC
Confidence 4455556888889999999999998876544
No 232
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=91.00 E-value=0.86 Score=41.58 Aligned_cols=84 Identities=14% Similarity=0.075 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh-----hhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-----EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 311 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~-----g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La 311 (368)
.+|..+.++++++ .| +..-..++..|+.+|... |+.++|.+++++++.+- |...+ ...+..|
T Consensus 180 ~~A~a~lerAleL-----DP-~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~Ln----P~~~i---d~~v~YA 246 (301)
T 3u64_A 180 HAAVMMLERACDL-----WP-SYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYC----SAHDP---DHHITYA 246 (301)
T ss_dssp HHHHHHHHHHHHH-----CT-THHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHC----CTTCS---HHHHHHH
T ss_pred HHHHHHHHHHHHh-----CC-CcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhC----CCCCc---hHHHHHH
Confidence 4555556666554 22 222355788899999885 99999999999999743 21113 3456667
Q ss_pred hHhhh-cCChHHHHHHHHHHHHh
Q 017649 312 KLEWF-LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 312 ~l~~~-~g~~~eA~~~l~kAl~i 333 (368)
..+.. .|++++|..++++|+.+
T Consensus 247 ~~l~~~~gd~~~a~~~L~kAL~a 269 (301)
T 3u64_A 247 DALCIPLNNRAGFDEALDRALAI 269 (301)
T ss_dssp HHTTTTTTCHHHHHHHHHHHHHC
T ss_pred HHHHHhcCCHHHHHHHHHHHHcC
Confidence 77777 59999999999999984
No 233
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=90.50 E-value=0.98 Score=36.99 Aligned_cols=72 Identities=10% Similarity=-0.022 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhhcC---ChHHHHHHHHHHHHHhhcccCCccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhc
Q 017649 221 NILSKKTLALTSCG---NHQEVVSTYKMIEKLQKKLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVY 296 (368)
Q Consensus 221 ~~l~~~a~~~~~~g---~~~eA~~l~~~~l~~~~~~l~~~h~-~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~ 296 (368)
+..++.|..+...+ ++++++.+++.+++.. ++ .--.+++.|+..+.++|+|++|.+++++++++-
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-------~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ie---- 101 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-------SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE---- 101 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-------CHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-------CccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC----
Confidence 34455566665555 5668888887776532 12 335678899999999999999999999998743
Q ss_pred CCCChHHH
Q 017649 297 PQFHPLLG 304 (368)
Q Consensus 297 g~~hp~~~ 304 (368)
|.|++..
T Consensus 102 -P~n~QA~ 108 (152)
T 1pc2_A 102 -PQNNQAK 108 (152)
T ss_dssp -TTCHHHH
T ss_pred -CCCHHHH
Confidence 5666543
No 234
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=90.28 E-value=0.16 Score=49.24 Aligned_cols=54 Identities=9% Similarity=0.029 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 264 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 264 ~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+...++..+...|.|++|..++.++ ..+.+||..+..+|++++|++.+++|..+
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a----------------~n~~~LA~~L~~Lg~yq~AVea~~KA~~~ 177 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV----------------SNFGRLASTLVHLGEYQAAVDGARKANST 177 (449)
T ss_dssp -------------CTTTHHHHHHHT----------------TCHHHHHHHHHTTTCHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh----------------hhHHHHHHHHHHhccHHHHHHHHHHcCCc
Confidence 6778888888999999998888865 35678899999999999999999998433
No 235
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=89.61 E-value=4.4 Score=31.91 Aligned_cols=83 Identities=12% Similarity=0.057 Sum_probs=58.2
Q ss_pred cHHHHHHHHHHHHHhhhh---HHHHHHHHHhhhhhHHhhcCCCCh-HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 260 NLMQTREKLIKILMELED---WKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g~---~~~Al~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
....+..++|.++....+ ..+++.+++ .++...+| ..--.+|.||..+..+|+|.+|+.++...+++
T Consensus 33 ~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe-------~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~-- 103 (126)
T 1nzn_A 33 VSKSTQFEYAWCLVRTRYNDDIRKGIVLLE-------ELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT-- 103 (126)
T ss_dssp CCHHHHHHHHHHHTTSSSHHHHHHHHHHHH-------HHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHH-------HHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh--
Confidence 446778888888876543 334554444 44444556 45567889999999999999999998888763
Q ss_pred cccCCCCchHHHHHHHHHH
Q 017649 336 ITHGTNSPFMKELILKLEE 354 (368)
Q Consensus 336 ~~~G~~hp~~~~l~~~L~~ 354 (368)
-|+++-...+...+++
T Consensus 104 ---eP~n~QA~~Lk~~i~~ 119 (126)
T 1nzn_A 104 ---EPQNNQAKELERLIDK 119 (126)
T ss_dssp ---CTTCHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHH
Confidence 4667666666666544
No 236
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=88.61 E-value=7.9 Score=34.21 Aligned_cols=55 Identities=9% Similarity=-0.037 Sum_probs=44.6
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh-cCChHHHHHHHHHHHHh
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~kAl~i 333 (368)
+.|...++.+.++...-+||.||.+.....+.+..+.. ++..++|..+-++|++-
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~ 203 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDD 203 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46777888888888889999999987777777777665 78999999988877653
No 237
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=88.54 E-value=1.3 Score=41.87 Aligned_cols=63 Identities=14% Similarity=0.026 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 262 MQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 262 ~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..++..++.++...|++++|+.+.++++..- + + ...+..+|.++...|++++|+..|.+|+.+
T Consensus 277 a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln-----~-s---~~a~~llG~~~~~~G~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 277 SIIYQIKAVSALVKGKTDESYQAINTGIDLE-----M-S---WLNYVLLGKVYEMKGMNREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-----C-C---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC-----C-C---HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 3345556666777799999999999999863 2 2 345678899999999999999999999974
No 238
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=88.54 E-value=8.3 Score=34.40 Aligned_cols=55 Identities=20% Similarity=0.291 Sum_probs=46.4
Q ss_pred HHHHHHHHhhhhhHHhhc--CCCChHHHHHHhhhhhHhh-hcCChHHHHHHHHHHHHh
Q 017649 279 KEALAYCQLTIPVYQRVY--PQFHPLLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~--g~~hp~~~~~l~~La~l~~-~~g~~~eA~~~l~kAl~i 333 (368)
+.|.+.++.+.++...-+ ||.||.+.....|.+..|. .++..++|..+-++|++-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 467778888888888889 9999998777777877776 479999999999999876
No 239
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=88.25 E-value=2.5 Score=37.09 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=44.6
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh-cCChHHHHHHHHHHHHh
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~kAl~i 333 (368)
+.|...++.+.++...-+||.||.+.....+.+..+.. ++..++|..+-++|++-
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd~ 202 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 202 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46777888999988888999999987777777777665 79999999988877753
No 240
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=85.93 E-value=4.1 Score=36.28 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=44.7
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh-cCChHHHHHHHHHHHHh
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~kAl~i 333 (368)
+.|...++.+.++...-+||.||.+.....+.+..+.. ++..++|..+-++|++-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46677888888888889999999987777777777765 68999999988877653
No 241
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.74 E-value=12 Score=36.02 Aligned_cols=103 Identities=10% Similarity=-0.034 Sum_probs=73.1
Q ss_pred HHhhhcCChHHHHHHHHHHHHHhhcccCC-ccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH-HH
Q 017649 228 LALTSCGNHQEVVSTYKMIEKLQKKLYHP-FSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL-GL 305 (368)
Q Consensus 228 ~~~~~~g~~~eA~~l~~~~l~~~~~~l~~-~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~-~~ 305 (368)
..+...|++.+|.+++..+..- ..+. +....+...-..+++|...+||.+|..+..++....-.. +.+|.+ +.
T Consensus 145 ~i~e~~g~~~eA~~iL~~l~~E---t~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~--~~~~~lk~~ 219 (445)
T 4b4t_P 145 EIKKEEGKIDEAADILCELQVE---TYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKN--PKYESLKLE 219 (445)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHH---HCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS--SCCHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHH---HHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhccc--CCcHHHHHH
Confidence 3455779999999988876532 1222 233445666677888999999999999888865433222 345554 56
Q ss_pred HHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 306 QYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 306 ~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
.+...|.++...++|.+|-.+|.++.+...
T Consensus 220 ~~~~~~~~~~~e~~y~~a~~~y~e~~~~~~ 249 (445)
T 4b4t_P 220 YYNLLVKISLHKREYLEVAQYLQEIYQTDA 249 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHhccc
Confidence 666779999999999999999998876543
No 242
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=85.33 E-value=25 Score=33.20 Aligned_cols=106 Identities=16% Similarity=0.082 Sum_probs=72.3
Q ss_pred CChHHHHHHHHHHHHHhhcccCCccccHHH--HHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhh
Q 017649 234 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQ--TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 311 (368)
Q Consensus 234 g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~--~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La 311 (368)
+..+.-++++..+++-.. ......++ +-..|+..|...|+|.+|++...+++.-+.+.-. ...+.-.+..-.
T Consensus 73 ~~~~~~~~~~~~~~~~a~----~~~r~flr~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd--~~~llev~lle~ 146 (394)
T 3txn_A 73 AGTGIEVQLCKDCIEWAK----QEKRTFLRQSLEARLIALYFDTALYTEALALGAQLLRELKKLDD--KNLLVEVQLLES 146 (394)
T ss_dssp CCHHHHHHHHHHHHHHHH----HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC--THHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhcccc--chhHHHHHHHHH
Confidence 344444555555544221 11222333 3347999999999999999999999888876532 233444455557
Q ss_pred hHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHH
Q 017649 312 KLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 347 (368)
Q Consensus 312 ~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~ 347 (368)
+++..++++.++...|.+|..+....+ .||.+..
T Consensus 147 ~~~~~~~n~~k~k~~l~~a~~~~~ai~--~~p~i~a 180 (394)
T 3txn_A 147 KTYHALSNLPKARAALTSARTTANAIY--CPPKVQG 180 (394)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSC--CCHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHhhhccCC--CCHHHHH
Confidence 888999999999999999999887654 5665543
No 243
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=84.99 E-value=2.9 Score=38.40 Aligned_cols=58 Identities=9% Similarity=-0.095 Sum_probs=42.2
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhh
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTI 289 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l 289 (368)
.+..+...|++++|++++.+.+.. +| +...+.++-.+++++..+|+.+.|.+.+++..
T Consensus 106 la~i~~~~g~~eeAL~~l~~~i~~-----~~-~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~ 163 (310)
T 3mv2_B 106 LATAQAILGDLDKSLETCVEGIDN-----DE-AEGTTELLLLAIEVALLNNNVSTASTIFDNYT 163 (310)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTS-----SC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHhcc-----CC-CcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 344455679999999988876431 12 24567777889999999999999988876543
No 244
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=84.56 E-value=9.9 Score=37.79 Aligned_cols=88 Identities=15% Similarity=0.052 Sum_probs=52.6
Q ss_pred hhcCC-hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhh----------HHHHHHHHHhhhhhHHhhcCCC
Q 017649 231 TSCGN-HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED----------WKEALAYCQLTIPVYQRVYPQF 299 (368)
Q Consensus 231 ~~~g~-~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~----------~~~Al~~~~~~l~~~e~~~g~~ 299 (368)
...|+ .++|++.+.+++.+ .|.++ .+.+.-+.++..+|+ +++|++++.+++....+-
T Consensus 39 ~~~~~~~eeal~~~~~~l~~-----nP~~~---taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~---- 106 (567)
T 1dce_A 39 RQAGELDESVLELTSQILGA-----NPDFA---TLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS---- 106 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHHH-----CTTCH---HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC----
T ss_pred HHcCCCCHHHHHHHHHHHHH-----CchhH---HHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC----
Confidence 34444 46778888887764 34444 344444555555666 889999988888633222
Q ss_pred ChHHHHHHhhhhhHhhhcC--ChHHHHHHHHHHHHhh
Q 017649 300 HPLLGLQYYTCGKLEWFLG--DTENAIKSMTEAVEIL 334 (368)
Q Consensus 300 hp~~~~~l~~La~l~~~~g--~~~eA~~~l~kAl~i~ 334 (368)
..+++.-+-++...| ++++|+..+.+|+++-
T Consensus 107 ----y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d 139 (567)
T 1dce_A 107 ----YGTWHHRCWLLSRLPEPNWARELELCARFLEAD 139 (567)
T ss_dssp ----HHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHC
T ss_pred ----HHHHHHHHHHHHHcccccHHHHHHHHHHHHhhc
Confidence 223333344444556 4577777777777653
No 245
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=83.81 E-value=19 Score=33.33 Aligned_cols=62 Identities=8% Similarity=0.049 Sum_probs=31.9
Q ss_pred hhhcCCh---HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHH
Q 017649 230 LTSCGNH---QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQ 293 (368)
Q Consensus 230 ~~~~g~~---~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e 293 (368)
....|+| -||-++++.+.....+ ...+...+.++..-+..+.+.|++.-|.+++...+++|+
T Consensus 22 ~I~~G~y~~~YEAHQ~~RTi~~Ry~~--~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~ 86 (336)
T 3lpz_A 22 RIAEGQPEEQYEAAQETRLVAARYSK--QGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFR 86 (336)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCccccHHHHHHHHHHHHHHh--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHH
Confidence 3455666 6666666555443211 122333444455555555555666666665555555554
No 246
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=83.50 E-value=4.8 Score=35.85 Aligned_cols=55 Identities=20% Similarity=0.164 Sum_probs=44.2
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh-cCChHHHHHHHHHHHHhh
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~kAl~i~ 334 (368)
+.|...++.+.++. .-+||.||.+.....+.+..|.. ++..++|..+-++|++-.
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~A 228 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEMA 228 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 46777888888888 88999999987777777777765 799999999888877643
No 247
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=83.17 E-value=8.7 Score=37.53 Aligned_cols=91 Identities=7% Similarity=-0.030 Sum_probs=65.5
Q ss_pred HHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHH
Q 017649 228 LALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQY 307 (368)
Q Consensus 228 ~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l 307 (368)
..+...|++++|.++++..... -+.|+ ..+++.|...|...|++++|.+++....+ .-..|+. ..+
T Consensus 113 ~~~~~~g~~~~A~~l~~~M~~~---g~~Pd----~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~G~~Pd~----~ty 178 (501)
T 4g26_A 113 RLAVAKDDPEMAFDMVKQMKAF---GIQPR----LRSYGPALFGFCRKGDADKAYEVDAHMVE---SEVVPEE----PEL 178 (501)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHT---TCCCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHH---TTCCCCH----HHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHc---CCCCc----cceehHHHHHHHHCCCHHHHHHHHHHHHh---cCCCCCH----HHH
Confidence 3455678999999998876542 13332 45677899999999999999998887654 2122332 345
Q ss_pred hhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 308 YTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 308 ~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
..|-..+...|+.++|..+|++-.+
T Consensus 179 ~~Li~~~~~~g~~d~A~~ll~~Mr~ 203 (501)
T 4g26_A 179 AALLKVSMDTKNADKVYKTLQRLRD 203 (501)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 6677778899999999999888544
No 248
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=82.70 E-value=15 Score=34.94 Aligned_cols=74 Identities=11% Similarity=0.129 Sum_probs=57.4
Q ss_pred HHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc-cCCC-CchHHHHHHHHHHHH
Q 017649 280 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT-HGTN-SPFMKELILKLEEAQ 356 (368)
Q Consensus 280 ~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~-~G~~-hp~~~~l~~~L~~~~ 356 (368)
.++.++.+++.+.++.|+..|. .-|.-+|.-+...+++.||+..+-.|-++++.. |..+ ..+++|.++-..++.
T Consensus 297 ~~~~L~~~AI~sa~~~Y~n~Hv---YPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAneli 372 (550)
T 3u84_A 297 DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVI 372 (550)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHHHhccCCc---cceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHhh
Confidence 3788999999999999998775 445667888889999999999999988877643 5444 467888776655554
No 249
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=82.49 E-value=20 Score=34.11 Aligned_cols=78 Identities=10% Similarity=0.125 Sum_probs=58.6
Q ss_pred HHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc-ccCCCC-chHHHHHHHHHHHHH
Q 017649 280 EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI-THGTNS-PFMKELILKLEEAQA 357 (368)
Q Consensus 280 ~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~-~~G~~h-p~~~~l~~~L~~~~~ 357 (368)
.+++++.+++.+.++.|...|. .-+.-+|--+...+++.+|+..+-+|-+++.. .|+.+. .+++++..-..++.-
T Consensus 282 ~~~~Lf~~AI~~ar~~Y~~~hv---YPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~eIanelip 358 (489)
T 4gq4_A 282 DPLTLYHKGIASAKTYYRDEHI---YPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFEVANDVIP 358 (489)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHHHHHTHHH
T ss_pred CHHHHHHHHHHHHHHhcccCcc---cceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHHHHHHhhh
Confidence 3678899999999999998883 44555677778889999999999998887764 466554 577777766666654
Q ss_pred HHh
Q 017649 358 EAS 360 (368)
Q Consensus 358 el~ 360 (368)
.+.
T Consensus 359 ~~l 361 (489)
T 4gq4_A 359 NLL 361 (489)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 250
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=82.05 E-value=22 Score=33.22 Aligned_cols=74 Identities=19% Similarity=0.118 Sum_probs=56.6
Q ss_pred HHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc-cCCC-CchHHHHHHHHHHHHH
Q 017649 281 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT-HGTN-SPFMKELILKLEEAQA 357 (368)
Q Consensus 281 Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~-~G~~-hp~~~~l~~~L~~~~~ 357 (368)
++.++.+++.+.++.|+..|. .-+.-+|.-+...+++.||+..+-+|-++.+.. |..+ ..++++..+-..++.=
T Consensus 276 ~l~L~~~AI~sa~~yY~n~Hv---YPYtylgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~eIAneliP 351 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHI---YPYTYLGGYYYRKKKYYEAIASWVDAGYVAGKYNYSKDDEEMYKEFHEIANDLIP 351 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCS---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHhccCCc---cchhhhhhhhhhcchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhh
Confidence 788999999999999998775 445667888889999999999999988876643 5544 4577777665555543
No 251
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=82.03 E-value=3.6 Score=36.72 Aligned_cols=55 Identities=11% Similarity=0.063 Sum_probs=44.3
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh-cCChHHHHHHHHHHHHh
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-LGDTENAIKSMTEAVEI 333 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~-~g~~~eA~~~l~kAl~i 333 (368)
+.|...++.+.++...-+||.||.+.....+.+..|.. ++..++|..+-++|++-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 46777888899988888999999987777777777665 79999999987777653
No 252
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=82.01 E-value=6.2 Score=39.28 Aligned_cols=90 Identities=10% Similarity=-0.089 Sum_probs=60.0
Q ss_pred HHhhhcC--ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhh-hHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 228 LALTSCG--NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 228 ~~~~~~g--~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g-~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
..+..-+ +++++++.+.+++++ +|.+ .++...-+.++...| .++++++++.++++. +|.-.
T Consensus 115 w~l~~l~~~~~~~el~~~~k~l~~-----d~~N---~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~--------~p~n~ 178 (567)
T 1dce_A 115 WLLSRLPEPNWARELELCARFLEA-----DERN---FHCWDYRRFVAAQAAVAPAEELAFTDSLITR--------NFSNY 178 (567)
T ss_dssp HHHHTCSSCCHHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT--------TCCCH
T ss_pred HHHHHcccccHHHHHHHHHHHHhh-----cccc---ccHHHHHHHHHHHcCCChHHHHHHHHHHHHH--------CCCCc
Confidence 3344456 678999998888775 2333 345555666677778 899999999998863 23333
Q ss_pred HHHhhhhhHhhhc--------------CChHHHHHHHHHHHHh
Q 017649 305 LQYYTCGKLEWFL--------------GDTENAIKSMTEAVEI 333 (368)
Q Consensus 305 ~~l~~La~l~~~~--------------g~~~eA~~~l~kAl~i 333 (368)
.+++..+.++..+ +++++|++++.+|+.+
T Consensus 179 saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~ 221 (567)
T 1dce_A 179 SSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT 221 (567)
T ss_dssp HHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhh
Confidence 4444555554442 5678999999999874
No 253
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=81.88 E-value=3.8 Score=35.95 Aligned_cols=55 Identities=13% Similarity=0.132 Sum_probs=44.6
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhh-hcCChHHHHHHHHHHHHh
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW-FLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~-~~g~~~eA~~~l~kAl~i 333 (368)
+.|...++.+.++...-+||.||.+.....+.+..+. .++..++|...-++|++-
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~ 205 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDE 205 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4677788888888888999999998777777777766 468999999988877653
No 254
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=81.03 E-value=5.5 Score=28.82 Aligned_cols=54 Identities=19% Similarity=0.105 Sum_probs=38.1
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc--ccCCCCchHHHHHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI--THGTNSPFMKELILKLEEAQ 356 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~--~~G~~hp~~~~l~~~L~~~~ 356 (368)
.|+.+.+-|.-.-..|++++|..+|.+|++.+.. .+.++...-..+..++.+-.
T Consensus 10 ~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~ 65 (83)
T 2v6y_A 10 MARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYK 65 (83)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 3455555666677889999999999999998775 35666654444666665543
No 255
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=81.02 E-value=10 Score=38.50 Aligned_cols=91 Identities=13% Similarity=0.046 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhhhh--hHHhhcC-CCChHHHHHHhh---------hh-hHhhhcCChHHHHHHHHH
Q 017649 263 QTREKLIKILMELEDWKEALAYCQLTIP--VYQRVYP-QFHPLLGLQYYT---------CG-KLEWFLGDTENAIKSMTE 329 (368)
Q Consensus 263 ~~~~~La~~~~~~g~~~~Al~~~~~~l~--~~e~~~g-~~hp~~~~~l~~---------La-~l~~~~g~~~eA~~~l~k 329 (368)
.....||..+...|+++.|.+.+.++-+ ....++- ...+.....+-. .| .++..+|++++|+++|.+
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~ 761 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIK 761 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHH
Confidence 4567899999999999999998887522 2222211 122222111111 12 244557999999998765
Q ss_pred ------HHHhhccccCCCCchHHHHHHHHHH
Q 017649 330 ------AVEILRITHGTNSPFMKELILKLEE 354 (368)
Q Consensus 330 ------Al~i~~~~~G~~hp~~~~l~~~L~~ 354 (368)
|+.+. .+||+++..+.++..+..+
T Consensus 762 ~~~~~~A~~lA-~~~~~~~~~i~~~~~~~~~ 791 (814)
T 3mkq_A 762 SQRFSEAAFLG-STYGLGDNEVNDIVTKWKE 791 (814)
T ss_dssp TTCHHHHHHHH-HHTTCCHHHHHHHHHHHHH
T ss_pred cCChHHHHHHH-HHhCCChHHHHHHHHHHHH
Confidence 55544 4578877555666655543
No 256
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=80.67 E-value=32 Score=31.35 Aligned_cols=123 Identities=10% Similarity=-0.004 Sum_probs=78.8
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHH
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLL 303 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~ 303 (368)
..+.......|+|-||.++++.+.....+ -..+...+.....-+..+.+.|++.-|.+++...++++++.--+...
T Consensus 17 l~rl~~~I~~G~yYEAhQ~~Rtl~~Ry~~--~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~llvev~~~~~~~~~~-- 92 (312)
T 2wpv_A 17 LQRFENKIKAGDYYEAHQTLRTIANRYVR--SKSYEHAIELISQGALSFLKAKQGGSGTDLIFYLLEVYDLAEVKVDD-- 92 (312)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCSH--
T ss_pred HHHHHHHhhccChHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCH--
Confidence 33344455779999999998887665422 12344566777778888888999999999999999999875333332
Q ss_pred HHHHhhhhhHhhhcCC-hHHHHHHHHHHHHhhccccCC--CCchHHHHHHH
Q 017649 304 GLQYYTCGKLEWFLGD-TENAIKSMTEAVEILRITHGT--NSPFMKELILK 351 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~-~~eA~~~l~kAl~i~~~~~G~--~hp~~~~l~~~ 351 (368)
....+|..+...... -.+-.+++.+|+......-|. .||....+...
T Consensus 93 -~~~~rl~~l~~~~p~~~~~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~~a~ 142 (312)
T 2wpv_A 93 -ISVARLVRLIAELDPSEPNLKDVITGMNNWSIKFSEYKFGDPYLHNTIGS 142 (312)
T ss_dssp -HHHHHHHHHHTTCCTTCTTHHHHHHHHHHHHHHTSSCTTCCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHCCCCCchHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHH
Confidence 244455555544221 223466788888777655332 37765555443
No 257
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=80.53 E-value=9.1 Score=30.08 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=30.9
Q ss_pred cccCCccc-cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 252 KLYHPFSV-NLMQTREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 252 ~~l~~~h~-~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
.++..+++ .--..++.||..+.++|+|.+|.+++..++++
T Consensus 63 ~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~ 103 (126)
T 1nzn_A 63 ELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 103 (126)
T ss_dssp HHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 34444334 44567888999999999999999999998863
No 258
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=79.94 E-value=6.5 Score=28.47 Aligned_cols=54 Identities=17% Similarity=0.108 Sum_probs=36.7
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc--ccCCCCchHHHHHHHHHHHHH
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI--THGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~--~~G~~hp~~~~l~~~L~~~~~ 357 (368)
|+.+.+-|.-.-..|++++|..+|.+|++.+.. .+.++...-..+..++.+-..
T Consensus 19 Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~ 74 (83)
T 2w2u_A 19 ARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKR 74 (83)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 444455555667889999999999999998775 345665543346666655433
No 259
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=79.54 E-value=15 Score=33.46 Aligned_cols=94 Identities=10% Similarity=-0.024 Sum_probs=56.1
Q ss_pred ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhh--hHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhh
Q 017649 235 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE--DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGK 312 (368)
Q Consensus 235 ~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g--~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~ 312 (368)
..++|+.++.+++.+ .|.|.. +.+.-+.++..+| +++++++++..++....+.|...|. ++..+..+..
T Consensus 48 ~s~~aL~~t~~~L~~-----nP~~~t---aWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~-R~~iL~~~~~ 118 (306)
T 3dra_A 48 YSERALHITELGINE-----LASHYT---IWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNY-RQLIIGQIME 118 (306)
T ss_dssp CSHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHH-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-----CcHHHH---HHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHH-HHHHHHHHHH
Confidence 346899988888764 344443 4455566677778 9999999999988644333222221 2222211111
Q ss_pred HhhhcCChHHHHHHHHHHHHhhccc
Q 017649 313 LEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 313 l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
.....+++++++..+.+++++--+.
T Consensus 119 ~l~~~~~~~~EL~~~~~~l~~~pkn 143 (306)
T 3dra_A 119 LNNNDFDPYREFDILEAMLSSDPKN 143 (306)
T ss_dssp HTTTCCCTHHHHHHHHHHHHHCTTC
T ss_pred hccccCCHHHHHHHHHHHHHhCCCC
Confidence 1111267889999888888654433
No 260
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=79.13 E-value=22 Score=28.99 Aligned_cols=87 Identities=11% Similarity=0.157 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF 316 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~ 316 (368)
++.++.|+++....-..-+......+...-..|. +...+|.++|.+.++.++.. |...+......|+....
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~--------hKkFAKiwi~~AqFEiR 106 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARAN--------CKKFAFVHISFAQFELS 106 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHH--------CTTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHH
Confidence 5666677766553211001112222222222221 24558888998888888875 33336666666777778
Q ss_pred cCChHHHHHHHHHHHH
Q 017649 317 LGDTENAIKSMTEAVE 332 (368)
Q Consensus 317 ~g~~~eA~~~l~kAl~ 332 (368)
+|....|++.+.+|+.
T Consensus 107 qgnl~kARkILg~AiG 122 (161)
T 4h7y_A 107 QGNVKKSKQLLQKAVE 122 (161)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHhc
Confidence 9999999999999998
No 261
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=77.25 E-value=26 Score=28.07 Aligned_cols=83 Identities=16% Similarity=0.034 Sum_probs=57.2
Q ss_pred cHHHHHHHHHHHHHhh---hhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc
Q 017649 260 NLMQTREKLIKILMEL---EDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~---g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~ 336 (368)
...++..++|.++... .+..+++.+++.++.. ++. ..--.++-||..+..+|+|.+|+.+....++
T Consensus 37 vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~---- 105 (144)
T 1y8m_A 37 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFE---- 105 (144)
T ss_dssp SCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Ccc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHh----
Confidence 4466777888878765 4556677776665541 122 2335678899999999999999999888776
Q ss_pred ccCCCCchHHHHHHHHHH
Q 017649 337 THGTNSPFMKELILKLEE 354 (368)
Q Consensus 337 ~~G~~hp~~~~l~~~L~~ 354 (368)
.-|++.-...+...+++
T Consensus 106 -~eP~n~QA~~Lk~~Ie~ 122 (144)
T 1y8m_A 106 -HERNNKQVGALKSMVED 122 (144)
T ss_dssp -TCCCCHHHHHHHHHHHH
T ss_pred -cCCCcHHHHHHHHHHHH
Confidence 34666666666665543
No 262
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=76.22 E-value=17 Score=34.18 Aligned_cols=77 Identities=17% Similarity=0.174 Sum_probs=57.5
Q ss_pred HHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcC-CCCh
Q 017649 223 LSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYP-QFHP 301 (368)
Q Consensus 223 l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g-~~hp 301 (368)
+...+......|++.+++..+..++. .+|.+- .++..|+.++...|+..+|++.|++....+..-+| ...|
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~-----~~P~~E---~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~ 245 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTF-----EHPYRE---PLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 245 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH-----HSTTCH---HHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHH-----hCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 34455566788999999988777654 344443 34667899999999999999999999998888888 5566
Q ss_pred HHHHHH
Q 017649 302 LLGLQY 307 (368)
Q Consensus 302 ~~~~~l 307 (368)
.+--.+
T Consensus 246 ~l~~l~ 251 (388)
T 2ff4_A 246 TLRALN 251 (388)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 664333
No 263
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=75.87 E-value=28 Score=27.59 Aligned_cols=81 Identities=16% Similarity=0.029 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHhh---hhHHHHHHHHHhhhhhHHhhcCCCCh-HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 262 MQTREKLIKILMEL---EDWKEALAYCQLTIPVYQRVYPQFHP-LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 262 ~~~~~~La~~~~~~---g~~~~Al~~~~~~l~~~e~~~g~~hp-~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
.++.-++|.++... .+..+++.++..++. .+| ..--.++-||..+..+|+|.+|+.+....++
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~--------~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~----- 106 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYK--------EAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE----- 106 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT-----
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHh--------cCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh-----
Confidence 46777788777765 355567776665543 224 3456778899999999999999999888775
Q ss_pred cCCCCchHHHHHHHHHHH
Q 017649 338 HGTNSPFMKELILKLEEA 355 (368)
Q Consensus 338 ~G~~hp~~~~l~~~L~~~ 355 (368)
.-|++.-...+...+++.
T Consensus 107 ~eP~N~QA~~Lk~~Ie~k 124 (134)
T 3o48_A 107 HERNNKQVGALKSMVEDK 124 (134)
T ss_dssp TCTTCHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHH
Confidence 346666666666665443
No 264
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=73.68 E-value=2.3 Score=27.50 Aligned_cols=31 Identities=26% Similarity=0.639 Sum_probs=23.0
Q ss_pred cCccCCCCCcc-ceeecCCCCccccCCCCCCCCH
Q 017649 178 GYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRSK 210 (368)
Q Consensus 178 ~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~~ 210 (368)
.+.|| .|++ .+..+.....+.|..||.....
T Consensus 5 ~~~CP--~C~~~~l~~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 5 QKVCP--ACESAELIYDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp CCSCT--TTSCCCEEEETTTTEEEESSSCCBCCC
T ss_pred cEeCc--CCCCcceEEcCCCCeEECcccCCcccc
Confidence 45786 5777 6766666677999999987654
No 265
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=73.06 E-value=46 Score=28.83 Aligned_cols=73 Identities=14% Similarity=0.036 Sum_probs=50.7
Q ss_pred HHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhh-----cCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHH
Q 017649 282 LAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWF-----LGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEE 354 (368)
Q Consensus 282 l~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~-----~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~ 354 (368)
..+|..++.+....+-|..-.....+..-|..+.. .|..+.|...|++|.++....+.|.||+...+..+..-
T Consensus 98 ~~iC~dil~lld~~Lip~aEskVFY~KMKGDYyRYlAE~~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSV 175 (227)
T 2o8p_A 98 KAFLQSFEDCVDRLVEKSFFSKFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAY 175 (227)
T ss_dssp HHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHH
T ss_pred HHHHhhHHHHHHHhccCcHHHHHHHHHHhhhHHHHHHHHccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHH
Confidence 34677788888877766542222222223444433 46688999999999999999999999988887766543
No 266
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=72.03 E-value=0.89 Score=33.15 Aligned_cols=29 Identities=14% Similarity=0.337 Sum_probs=21.8
Q ss_pred cCccCCCCCccceeecCCCCccccCCCCCCC
Q 017649 178 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 208 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 208 (368)
.+.|+ +|++..+..+....|.|..||...
T Consensus 27 ~y~Cp--~CG~~~v~r~atGiW~C~~Cg~~~ 55 (83)
T 1vq8_Z 27 DHACP--NCGEDRVDRQGTGIWQCSYCDYKF 55 (83)
T ss_dssp CEECS--SSCCEEEEEEETTEEEETTTCCEE
T ss_pred cCcCC--CCCCcceeccCCCeEECCCCCCEe
Confidence 57786 677766666667789999999854
No 267
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=71.52 E-value=30 Score=37.08 Aligned_cols=93 Identities=3% Similarity=-0.189 Sum_probs=59.4
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGL 305 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~ 305 (368)
....+...|+.++|.+++........+-+.|+ ..+++.|...|...|++++|.+++.+..+ .-..|+...+.
T Consensus 133 LIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd----vvTYNtLI~Glck~G~~~eA~~Lf~eM~~---~G~~PDvvTYn- 204 (1134)
T 3spa_A 133 FFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT----LDMYNAVMLGWARQGAFKELVYVLFMVKD---AGLTPDLLSYA- 204 (1134)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTCCCCHHHHH-
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC----HhHHHHHHHHHHhCCCHHHHHHHHHHHHH---cCCCCcHHHHH-
Confidence 34456678999999999876554433334443 34678899999999999999999887643 22334433333
Q ss_pred HHhhhhhHhhhcCCh-HHHHHHHHH
Q 017649 306 QYYTCGKLEWFLGDT-ENAIKSMTE 329 (368)
Q Consensus 306 ~l~~La~l~~~~g~~-~eA~~~l~k 329 (368)
.|-..+...|+. ++|..++++
T Consensus 205 ---tLI~glcK~G~~~e~A~~Ll~E 226 (1134)
T 3spa_A 205 ---AALQCMGRQDQDAGTIERCLEQ 226 (1134)
T ss_dssp ---HHHHHHHHHTCCHHHHHHHHHH
T ss_pred ---HHHHHHHhCCCcHHHHHHHHHH
Confidence 333334455664 566666554
No 268
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=71.35 E-value=20 Score=33.58 Aligned_cols=33 Identities=12% Similarity=0.267 Sum_probs=27.0
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
|.-+..+.-+|..++..|++++|+.++++|+.+
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~L 306 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDL 306 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence 444456667777788889999999999999987
No 269
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=71.00 E-value=7.8 Score=37.98 Aligned_cols=61 Identities=18% Similarity=0.104 Sum_probs=49.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 264 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 264 ~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
++-.|+.+......+..|..||.+++... |..|..++.||.++...|+.-+|+-+|.+|+.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~--------P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLV--------PSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--------TTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhC--------CCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 44456666666667789999999988743 77889999999999999999999999998874
No 270
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=70.82 E-value=15 Score=29.23 Aligned_cols=61 Identities=13% Similarity=-0.023 Sum_probs=40.2
Q ss_pred HHHHHHHhhhcCC---hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhh
Q 017649 223 LSKKTLALTSCGN---HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 290 (368)
Q Consensus 223 l~~~a~~~~~~g~---~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~ 290 (368)
.++-|..+....+ ..+++.+++.+.+. +| ...-..+.-||..+.++|+|.+|.+++..+++
T Consensus 43 ~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~-----~~--~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~ 106 (134)
T 3o48_A 43 RFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AE--SRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 106 (134)
T ss_dssp HHHHHHHHHHSSCHHHHHHHHHHHHHHHHH-----CG--GGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Cc--chhHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 3455555544433 34556665555432 11 13456778899999999999999999998886
No 271
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=70.78 E-value=26 Score=25.68 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhc
Q 017649 217 ASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 252 (368)
Q Consensus 217 ~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~ 252 (368)
.+....+...|...-..|++++|+.+|..++..+..
T Consensus 12 l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 344455667777778889999999999998876544
No 272
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=70.75 E-value=7.8 Score=38.13 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=60.9
Q ss_pred hhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCC---ChHHHHHHhhhhhHhhhcCChHHHHHH
Q 017649 250 QKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQF---HPLLGLQYYTCGKLEWFLGDTENAIKS 326 (368)
Q Consensus 250 ~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~---hp~~~~~l~~La~l~~~~g~~~eA~~~ 326 (368)
++..+..+...-..+.+-|...|...+.++.|..+..++. +|.. ..+.+..+|-+|+++..+++|.+|..+
T Consensus 219 rta~lr~D~~~qa~l~nllLRnYL~~~~y~qA~~lvsk~~------fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~ 292 (523)
T 4b4t_S 219 KIASLKHDNETKAMLINLILRDFLNNGEVDSASDFISKLE------YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEY 292 (523)
T ss_dssp HHCCSCSSSCHHHHHHHHHHHHHHHSSCSTTHHHHHHHHC------SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHhcccCcchhHHHHHHHHHHHHccCcHHHHHHHHhcCc------CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3455666555556677788899999999999988876653 5633 356788888999999999999999999
Q ss_pred HHHHHH
Q 017649 327 MTEAVE 332 (368)
Q Consensus 327 l~kAl~ 332 (368)
+..|+.
T Consensus 293 L~~A~r 298 (523)
T 4b4t_S 293 IIAAIR 298 (523)
T ss_dssp HHHHTS
T ss_pred HHHHHH
Confidence 999885
No 273
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=69.51 E-value=40 Score=26.69 Aligned_cols=36 Identities=8% Similarity=-0.088 Sum_probs=29.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHhhhcCChHHHHHH
Q 017649 207 VRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVST 242 (368)
Q Consensus 207 ~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~eA~~l 242 (368)
..+.+++.++.......++.|......|+++.|.-.
T Consensus 3 ~~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~a~F~ 38 (141)
T 3o10_A 3 VGNPVEARRWLRQARANFSAARNDLHKNANEWVCFK 38 (141)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHGGGTTTTCHHHHHHH
T ss_pred CCChHHHHHHHHHHHhhhhHHhhHHhhCccceEeee
Confidence 346788899999999999999999999998766433
No 274
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=69.26 E-value=14 Score=29.67 Aligned_cols=61 Identities=13% Similarity=-0.033 Sum_probs=39.9
Q ss_pred HHHHHHHhhhcCC---hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhh
Q 017649 223 LSKKTLALTSCGN---HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIP 290 (368)
Q Consensus 223 l~~~a~~~~~~g~---~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~ 290 (368)
.++-|..+....+ ..+++.+++.+... +|. ..-..++-||..+.++|+|.+|.+++..+++
T Consensus 42 ~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~-----~~~--~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~ 105 (144)
T 1y8m_A 42 RFNYAWGLIKSTDVNDERLGVKILTDIYKE-----AES--RRRECLYYLTIGCYKLGEYSMAKRYVDTLFE 105 (144)
T ss_dssp HHHHHHHHHHSSSHHHHHHHHHHHHHHHHH-----CCS--THHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHhc-----Ccc--chhHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 3444544444332 34555565555431 121 3456778899999999999999999998886
No 275
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=69.22 E-value=25 Score=35.76 Aligned_cols=95 Identities=12% Similarity=-0.048 Sum_probs=61.2
Q ss_pred hhcCChHHHH-HHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhh-------cCCC---
Q 017649 231 TSCGNHQEVV-STYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV-------YPQF--- 299 (368)
Q Consensus 231 ~~~g~~~eA~-~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~-------~g~~--- 299 (368)
...|+.++|. +++++++.. . |.+ ....-.++......|++++|.+.++++++..... .|..
T Consensus 354 ~~~~~~~~a~r~il~rAi~~----~-P~s---~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~ 425 (679)
T 4e6h_A 354 GEKNTDSTVITKYLKLGQQC----I-PNS---AVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESA 425 (679)
T ss_dssp HHHSCCTTHHHHHHHHHHHH----C-TTC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHH
T ss_pred HhcCcHHHHHHHHHHHHHHh----C-CCC---HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhh
Confidence 3456777786 888777642 2 222 2234456677778899999999999998764211 1221
Q ss_pred ----ChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 300 ----HPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 300 ----hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
+......+...+.+....|..+.|+..+.+|++.
T Consensus 426 ~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~ 463 (679)
T 4e6h_A 426 INQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL 463 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT
T ss_pred hhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 1123334555566666778889999999999865
No 276
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=68.44 E-value=42 Score=31.05 Aligned_cols=109 Identities=10% Similarity=0.036 Sum_probs=62.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhh-hHHH
Q 017649 202 QQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELE-DWKE 280 (368)
Q Consensus 202 ~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g-~~~~ 280 (368)
+.|.-..+.+ ...+...+..+.. ..+..++|++++.+++.+ .|.|+.. .+.-..++..+| ++++
T Consensus 43 ~~~~i~y~~~-y~~~~~~~r~~~~------~~e~se~AL~lt~~~L~~-----nP~~yta---Wn~R~~iL~~l~~~l~e 107 (349)
T 3q7a_A 43 PVVPIMYSEE-YKDAMDYFRAIAA------KEEKSERALELTEIIVRM-----NPAHYTV---WQYRFSLLTSLNKSLED 107 (349)
T ss_dssp CSSCBCCCHH-HHHHHHHHHHHHH------TTCCSHHHHHHHHHHHHH-----CTTCHHH---HHHHHHHHHHTTCCHHH
T ss_pred CeeeeeeCHH-HHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHh-----CchhHHH---HHHHHHHHHHhhhhHHH
Confidence 4555444443 3444444444332 334557888888888764 3445443 444455566677 5999
Q ss_pred HHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhc-C-ChHHHHHHHHHHHHh
Q 017649 281 ALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-G-DTENAIKSMTEAVEI 333 (368)
Q Consensus 281 Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~-g-~~~eA~~~l~kAl~i 333 (368)
+++++..++... | .++ ...+.-+.++..+ + ++++++.++.+++++
T Consensus 108 EL~~~~~~L~~n----P-Kny---~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~ 154 (349)
T 3q7a_A 108 ELRLMNEFAVQN----L-KSY---QVWHHRLLLLDRISPQDPVSEIEYIHGSLLP 154 (349)
T ss_dssp HHHHHHHHHHTT----C-CCH---HHHHHHHHHHHHHCCSCCHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhC----C-CcH---HHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Confidence 999999888533 2 222 2222223333333 4 678888888887754
No 277
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=66.83 E-value=2.9 Score=28.09 Aligned_cols=36 Identities=25% Similarity=0.513 Sum_probs=24.6
Q ss_pred hhhhhcCccCCCCCcc-ceeecCCCCccccCCCCCCCCH
Q 017649 173 SAILEGYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRSK 210 (368)
Q Consensus 173 ~~~~~~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~~ 210 (368)
+.++....|| .|++ .+..+.....+.|..||..+..
T Consensus 6 ~~ll~~~~Cp--~C~~~~lv~D~~~ge~vC~~CGlVl~e 42 (58)
T 1dl6_A 6 LDALPRVTCP--NHPDAILVEDYRAGDMICPECGLVVGD 42 (58)
T ss_dssp CCCCSCCSBT--TBSSSCCEECSSSCCEECTTTCCEECC
T ss_pred hhccccccCc--CCCCCceeEeCCCCeEEeCCCCCEEec
Confidence 3456667897 4654 4555656677999999987653
No 278
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=64.93 E-value=2.3 Score=28.80 Aligned_cols=31 Identities=23% Similarity=0.391 Sum_probs=21.8
Q ss_pred cCccCCCCCccceee----cCCCCccccCCCCCCC
Q 017649 178 GYRCKDDGCSGFLLR----DSDDKGFTCQQCGLVR 208 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~----~~~~~~~~C~~C~~~~ 208 (368)
-.+|....|.+++-| +...+.|+|..|+...
T Consensus 9 pvRC~r~~CraylNP~~~~~~~~~~W~C~~C~~~N 43 (59)
T 2yrc_A 9 PVLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRN 43 (59)
T ss_dssp CCBCSCTTTCCBCCTTSEEEGGGTEEECSSSCCEE
T ss_pred CcccCCCCCCeEECCceEEECCCCEEEcccCCCcC
Confidence 468876568877654 3346789999998743
No 279
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=63.60 E-value=71 Score=28.47 Aligned_cols=51 Identities=20% Similarity=0.067 Sum_probs=35.9
Q ss_pred HhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHh
Q 017649 229 ALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQL 287 (368)
Q Consensus 229 ~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~ 287 (368)
.+...|+.++|++....-++. +|.=...+..|++.+.-.|+|++|..-++.
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~--------~P~da~~R~~LfqLLcv~G~w~RA~~QL~~ 56 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKA--------SPKDASLRSSFIELLCIDGDFERADEQLMQ 56 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHT--------CTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHh--------CCcCHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 456778888888766544332 333355688899999999999999775443
No 280
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=63.52 E-value=23 Score=32.13 Aligned_cols=82 Identities=5% Similarity=-0.007 Sum_probs=50.0
Q ss_pred CChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHH--HHHHHHHhhhhhHHhhcCCCChHHHHHHhhhh
Q 017649 234 GNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWK--EALAYCQLTIPVYQRVYPQFHPLLGLQYYTCG 311 (368)
Q Consensus 234 g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~--~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La 311 (368)
+++++++..+.+++.. +|.+ .++..+-..++...|.|+ ++++++.++++. .|.++. +...-+
T Consensus 124 ~~~~~EL~~~~~~l~~-----~pkn---y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~----d~~N~s----AW~~R~ 187 (306)
T 3dra_A 124 FDPYREFDILEAMLSS-----DPKN---HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT----DLKNNS----AWSHRF 187 (306)
T ss_dssp CCTHHHHHHHHHHHHH-----CTTC---HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH----CTTCHH----HHHHHH
T ss_pred CCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHhcccChHHHHHHHHHHHHh----CCCCHH----HHHHHH
Confidence 6788888888888764 3333 344555566667778888 999998888853 232222 222223
Q ss_pred hHhhhcCC------hHHHHHHHHHHH
Q 017649 312 KLEWFLGD------TENAIKSMTEAV 331 (368)
Q Consensus 312 ~l~~~~g~------~~eA~~~l~kAl 331 (368)
.+....++ ++++++++.+|+
T Consensus 188 ~ll~~l~~~~~~~~~~eEl~~~~~aI 213 (306)
T 3dra_A 188 FLLFSKKHLATDNTIDEELNYVKDKI 213 (306)
T ss_dssp HHHHSSGGGCCHHHHHHHHHHHHHHH
T ss_pred HHHHhccccchhhhHHHHHHHHHHHH
Confidence 33333343 666766666555
No 281
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=63.34 E-value=25 Score=25.81 Aligned_cols=35 Identities=9% Similarity=-0.027 Sum_probs=29.1
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
.|..+.+-|.-.-..|++++|+.+|.+|++.+...
T Consensus 14 ~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~a 48 (93)
T 1wfd_A 14 AAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQV 48 (93)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 45666777777788899999999999999987764
No 282
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=63.29 E-value=85 Score=28.69 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=36.4
Q ss_pred HHHHHHHHhhhcCChH-HHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhh-------hhHHHHHHHHHhhhh
Q 017649 222 ILSKKTLALTSCGNHQ-EVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMEL-------EDWKEALAYCQLTIP 290 (368)
Q Consensus 222 ~l~~~a~~~~~~g~~~-eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~-------g~~~~Al~~~~~~l~ 290 (368)
.+.+........|.+. +|+.++..++. +.|.|+..-..+..+....... ..+.+++.++..++.
T Consensus 31 ~~~~~~~~~~~~~e~s~eaL~~t~~~L~-----~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~ 102 (331)
T 3dss_A 31 SATQAVFQKRQAGELDESVLELTSQILG-----ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR 102 (331)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHT-----TCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHH-----HCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHH
Confidence 3444444445566664 67877777654 4566666555554444433321 126777777777765
No 283
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=60.21 E-value=34 Score=35.26 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=39.5
Q ss_pred HHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHH
Q 017649 226 KTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAY 284 (368)
Q Consensus 226 ~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~ 284 (368)
.|.-+.++|+++-|+++.+++... .|. -..+...|+.+|+.+|+|+.|+--
T Consensus 343 Qa~FLl~K~~~elAL~~Ak~AV~~-----aPs---eF~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 343 QTNFLLNRGDYELALGVSNTSTEL-----ALD---SFESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH-----CSS---CHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHhc-----Cch---hhHHHHHHHHHHHHhccHHHHHHH
Confidence 455567889999999888877553 233 345688899999999999999754
No 284
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=58.70 E-value=31 Score=24.70 Aligned_cols=36 Identities=11% Similarity=0.011 Sum_probs=28.7
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccc
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRIT 337 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~ 337 (368)
..+..+..-|.-.-..|++++|+.+|.+|++.+...
T Consensus 11 ~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a 46 (85)
T 2v6x_A 11 TKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLA 46 (85)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 455666666767778899999999999999977654
No 285
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=58.39 E-value=1.3e+02 Score=28.90 Aligned_cols=83 Identities=13% Similarity=-0.052 Sum_probs=55.8
Q ss_pred hHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhh
Q 017649 236 HQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEW 315 (368)
Q Consensus 236 ~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~ 315 (368)
.++|.+++..... .-+.|+ ..+++.|..+|...|++++|.+++++... .-..|+ ...+..|-..+.
T Consensus 86 l~~A~~lf~~M~~---~G~~Pd----~~tyn~lI~~~~~~g~~~~A~~l~~~M~~---~g~~Pd----~~tyn~lI~~~~ 151 (501)
T 4g26_A 86 LSRGFDIFKQMIV---DKVVPN----EATFTNGARLAVAKDDPEMAFDMVKQMKA---FGIQPR----LRSYGPALFGFC 151 (501)
T ss_dssp HHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTCCCC----HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---hCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHH---cCCCCc----cceehHHHHHHH
Confidence 4566666655432 223333 34577899999999999999998877643 112233 234566666778
Q ss_pred hcCChHHHHHHHHHHHH
Q 017649 316 FLGDTENAIKSMTEAVE 332 (368)
Q Consensus 316 ~~g~~~eA~~~l~kAl~ 332 (368)
..|+.++|..++.+-.+
T Consensus 152 ~~g~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 152 RKGDADKAYEVDAHMVE 168 (501)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHh
Confidence 89999999999887653
No 286
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=57.84 E-value=1.7 Score=30.57 Aligned_cols=50 Identities=18% Similarity=0.413 Sum_probs=31.2
Q ss_pred cCccCCCCCccceeecCCCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCChHHHHHHHHH
Q 017649 178 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRSKEEIKKIASEVNILSKKTLALTSCGNHQEVVSTYKM 245 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~~~~~~~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~ 245 (368)
.++|+ |+.....+...+.-+|+ ||.......+. .+...++.++|.++-.+
T Consensus 4 vv~C~---C~~~~~~~~~~kT~~C~-CG~~~~~~k~r--------------if~~~~d~~eA~e~~~~ 53 (71)
T 1gh9_A 4 IFRCD---CGRALYSREGAKTRKCV-CGRTVNVKDRR--------------IFGRADDFEEASELVRK 53 (71)
T ss_dssp EEEET---TSCCEEEETTCSEEEET-TTEEEECCSSS--------------CBSCCSSHHHHHHHHHH
T ss_pred EEECC---CCCEEEEcCCCcEEECC-CCCeeeeceEE--------------EEEecCCHHHHHHHHHH
Confidence 46774 77766666667777898 99877644322 23345566666655443
No 287
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=55.52 E-value=38 Score=24.42 Aligned_cols=44 Identities=11% Similarity=-0.023 Sum_probs=31.5
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcccc-CCCCchHHH
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH-GTNSPFMKE 347 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~-G~~hp~~~~ 347 (368)
|..+..-|.-.-..|++++|+.+|.+|++.+.... +...|..++
T Consensus 16 A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~ 60 (86)
T 4a5x_A 16 AATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRC 60 (86)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHH
Confidence 45555566666788999999999999999877553 333454444
No 288
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=54.61 E-value=62 Score=32.83 Aligned_cols=97 Identities=10% Similarity=0.046 Sum_probs=53.1
Q ss_pred hhhcCChHHHHHHHHHHHHHhhccc------CCcc--------ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhh
Q 017649 230 LTSCGNHQEVVSTYKMIEKLQKKLY------HPFS--------VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRV 295 (368)
Q Consensus 230 ~~~~g~~~eA~~l~~~~l~~~~~~l------~~~h--------~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~ 295 (368)
....|++++|.+++++++.....-+ -|.+ .....+.-..+......|+.+.|..++.++++.
T Consensus 388 ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A~~~---- 463 (679)
T 4e6h_A 388 YELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKCRRL---- 463 (679)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHT----
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----
Confidence 3456889999999998876421100 0211 012233444555556678888888888777654
Q ss_pred cCCCChHHHHHHhhhhhHhhhcCC-hHHHHHHHHHHHHh
Q 017649 296 YPQFHPLLGLQYYTCGKLEWFLGD-TENAIKSMTEAVEI 333 (368)
Q Consensus 296 ~g~~hp~~~~~l~~La~l~~~~g~-~~eA~~~l~kAl~i 333 (368)
.|+..+. .+...|.+....++ .+.|.+.|+++++.
T Consensus 464 ~~~~~~~---lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~ 499 (679)
T 4e6h_A 464 KKLVTPD---IYLENAYIEYHISKDTKTACKVLELGLKY 499 (679)
T ss_dssp GGGSCTH---HHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred cCCCChH---HHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 1222221 22234445444433 66677776666653
No 289
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=53.66 E-value=28 Score=30.41 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHH-hhhhHHHHHHHHHhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM-ELEDWKEALAYCQLTIP 290 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~-~~g~~~~Al~~~~~~l~ 290 (368)
+.|...|+.+..+...-++|.||..+.+.-+.+.-|. -+++-++|..+.+++.+
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567778888887766799999988887777665554 47899999998888765
No 290
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=52.78 E-value=64 Score=29.53 Aligned_cols=82 Identities=10% Similarity=-0.108 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhh-HHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhH
Q 017649 235 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELED-WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKL 313 (368)
Q Consensus 235 ~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~-~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l 313 (368)
.+++++..+.+++.+ +|.|+. +...-..+....|. ++++++++.+.++ ..|.++ .+.+..+.+
T Consensus 125 ~~~~EL~~~~k~l~~-----dprNy~---AW~~R~~vl~~l~~~~~eel~~~~~~I~----~~p~N~----SAW~~R~~l 188 (331)
T 3dss_A 125 NWARELELCARFLEA-----DERNFH---CWDYRRFVAAQAAVAPAEELAFTDSLIT----RNFSNY----SSWHYRSCL 188 (331)
T ss_dssp CHHHHHHHHHHHHHH-----CTTCHH---HHHHHHHHHHHTTCCHHHHHHHHHHHHH----HCSCCH----HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHh-----CCCCHH---HHHHHHHHHHHhCcCHHHHHHHHHHHHH----HCCCCH----HHHHHHHHH
Confidence 477888888777764 344443 34445555566677 6899999888885 233332 233333333
Q ss_pred hhhc--------------CChHHHHHHHHHHHH
Q 017649 314 EWFL--------------GDTENAIKSMTEAVE 332 (368)
Q Consensus 314 ~~~~--------------g~~~eA~~~l~kAl~ 332 (368)
+..+ +.++++++++.+|+.
T Consensus 189 l~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~ 221 (331)
T 3dss_A 189 LPQLHPQPDSGPQGRLPENVLLKELELVQNAFF 221 (331)
T ss_dssp HHHHSCCC------CCCHHHHHHHHHHHHHHHH
T ss_pred HHHhhhccccccccccchHHHHHHHHHHHHHHH
Confidence 3333 457888888888774
No 291
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=52.37 E-value=98 Score=29.73 Aligned_cols=73 Identities=15% Similarity=0.044 Sum_probs=51.7
Q ss_pred ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCC--CC--hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 259 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQ--FH--PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 259 ~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~--~h--p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..++.....|.++|.++++...|..+.+. ++.. ...|+ .+ .+....+|-+|+++...+++.+|...+.+|+..
T Consensus 173 ~~~l~l~n~L~kiYFkl~~~~lckni~k~-i~~~-~~~p~~~~~p~~q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~ 249 (455)
T 3t5v_B 173 RILLYLVNKLNNIYFRIESPQLCSNIFKN-FQPK-SMLAHFNEYQLDQQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQS 249 (455)
T ss_dssp HHHHHHHHHHHHHHHHSSCCTTHHHHHHT-HHHH-CCCSCGGGSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcCCHHHHHHHHHH-hccC-CCCcChhhCCccceEeeeHHHHHHHHHHccHHHHHHHHHHHHHh
Confidence 34456678889999999888766554432 2221 11111 11 246677888999999999999999999999997
No 292
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=52.21 E-value=76 Score=26.27 Aligned_cols=100 Identities=13% Similarity=0.021 Sum_probs=56.0
Q ss_pred hhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHh--hcC-CCChHHHHH
Q 017649 230 LTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR--VYP-QFHPLLGLQ 306 (368)
Q Consensus 230 ~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~--~~g-~~hp~~~~~ 306 (368)
..+.|+++.|.++.+.+. .-.....|+......|++.-|.+.++++-+.-.- +|- .........
T Consensus 15 AL~lg~l~~A~e~a~~l~-------------~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~k 81 (177)
T 3mkq_B 15 ALEYGNLDAALDEAKKLN-------------DSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSK 81 (177)
T ss_dssp HHHTTCHHHHHHHHHHHC-------------CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHH
T ss_pred HHhcCCHHHHHHHHHHhC-------------CHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHH
Confidence 357789988887755431 1234667888888888888887777765332221 110 001111111
Q ss_pred Hhhh----------hhHhhhcCChHHHHHHHHHHHH-----hhccccCCCC
Q 017649 307 YYTC----------GKLEWFLGDTENAIKSMTEAVE-----ILRITHGTNS 342 (368)
Q Consensus 307 l~~L----------a~l~~~~g~~~eA~~~l~kAl~-----i~~~~~G~~h 342 (368)
+-++ ...++.+|++++++++|.++-. .+-++||++.
T Consensus 82 la~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~~ 132 (177)
T 3mkq_B 82 MQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKANGDEA 132 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCHH
T ss_pred HHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHHcCcHH
Confidence 1111 2334567999999998876332 3445677743
No 293
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=51.45 E-value=33 Score=29.94 Aligned_cols=55 Identities=15% Similarity=0.077 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHH-hhhhHHHHHHHHHhhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM-ELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~-~~g~~~~Al~~~~~~l~~ 291 (368)
+.|...|+.+..+...-++|.||..+...-+.+.-|. -+++-++|..+.+++.+-
T Consensus 150 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyyEiln~~~~Ac~lAk~Afd~ 205 (236)
T 3iqu_A 150 DSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDE 205 (236)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4566778888877766799999988887777665554 468889999988887653
No 294
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=51.44 E-value=1.5e+02 Score=27.63 Aligned_cols=100 Identities=8% Similarity=-0.012 Sum_probs=61.5
Q ss_pred hcCChHHHHHHHHHHHHHhhcc---------cCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH
Q 017649 232 SCGNHQEVVSTYKMIEKLQKKL---------YHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL 302 (368)
Q Consensus 232 ~~g~~~eA~~l~~~~l~~~~~~---------l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~ 302 (368)
...+.+++.+.++.+....... .....-..+.+...++..|...|+..+|..+.+++-......-+.+-..
T Consensus 88 ~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v 167 (393)
T 4b4t_O 88 DSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRI 167 (393)
T ss_dssp HTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHH
T ss_pred hcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHH
Confidence 3446778877766553321111 1112234566777889999999999999999888877776654443334
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAV 331 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl 331 (368)
.+..+.-.+..+...+++.++....-.++
T Consensus 168 ~~~~y~~~~~~~~~~~~~a~~y~~~l~~l 196 (393)
T 4b4t_O 168 TNSFYSTNSQYFKFKNDFNSFYYTSLLYL 196 (393)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 55555555666666677766554433333
No 295
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=50.73 E-value=38 Score=34.95 Aligned_cols=54 Identities=13% Similarity=0.107 Sum_probs=42.7
Q ss_pred HHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHH
Q 017649 268 LIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTE 329 (368)
Q Consensus 268 La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~k 329 (368)
=+.-++..|+++-|+++.++++... |.--..++.||++|..+|+++.|+-.+--
T Consensus 343 Qa~FLl~K~~~elAL~~Ak~AV~~a--------PseF~tW~~La~vYi~l~d~e~ALLtLNS 396 (754)
T 4gns_B 343 QTNFLLNRGDYELALGVSNTSTELA--------LDSFESWYNLARCHIKKEEYEKALFAINS 396 (754)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--------SSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhccCcHHHHHHHHHHHHhcC--------chhhHHHHHHHHHHHHhccHHHHHHHHhc
Confidence 3555667899999999999998643 33335689999999999999999876543
No 296
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=50.38 E-value=60 Score=34.89 Aligned_cols=85 Identities=8% Similarity=-0.155 Sum_probs=58.2
Q ss_pred ccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcccc
Q 017649 259 VNLMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 338 (368)
Q Consensus 259 ~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~ 338 (368)
.....+++.|...|.+.|++++|.+++........+-..|+ + ..|..|-.-+...|+.++|.+++.+-.+ .-.
T Consensus 124 ~~~~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd---v-vTYNtLI~Glck~G~~~eA~~Lf~eM~~---~G~ 196 (1134)
T 3spa_A 124 SGQQQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT---L-DMYNAVMLGWARQGAFKELVYVLFMVKD---AGL 196 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC---H-HHHHHHHHHHHHHTCHHHHHHHHHHHHH---TTC
T ss_pred HhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC---H-hHHHHHHHHHHhCCCHHHHHHHHHHHHH---cCC
Confidence 34456788899999999999999999877655444333333 2 4667777788899999999999887643 233
Q ss_pred CCCCchHHHHHH
Q 017649 339 GTNSPFMKELIL 350 (368)
Q Consensus 339 G~~hp~~~~l~~ 350 (368)
-|+--.+.-++.
T Consensus 197 ~PDvvTYntLI~ 208 (1134)
T 3spa_A 197 TPDLLSYAAALQ 208 (1134)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCcHHHHHHHHH
Confidence 344433333333
No 297
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=49.01 E-value=37 Score=29.84 Aligned_cols=56 Identities=7% Similarity=-0.014 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHH-hhhhHHHHHHHHHhhhhhH
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM-ELEDWKEALAYCQLTIPVY 292 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~-~~g~~~~Al~~~~~~l~~~ 292 (368)
+.|...|+.+..+...-++|.||..+.+.-+.+.-|. -+++-++|..+.+++.+-.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd~A 204 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFDDA 204 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4566778888877766799999988887777665554 4688999999988876533
No 298
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=48.60 E-value=88 Score=25.47 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=42.2
Q ss_pred HHHhhhhHHHHHHHHHhhhhhHHhhcCCC----ChHHHHHH-hhhhhHhhhcCChHHHHHHHHHHHHhhccccC
Q 017649 271 ILMELEDWKEALAYCQLTIPVYQRVYPQF----HPLLGLQY-YTCGKLEWFLGDTENAIKSMTEAVEILRITHG 339 (368)
Q Consensus 271 ~~~~~g~~~~Al~~~~~~l~~~e~~~g~~----hp~~~~~l-~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G 339 (368)
.+.+.|+|-+|=+. ++.+-+..+.. ....|+.. ...|...+..|+...|..++.+|+..+.....
T Consensus 41 ~lFn~g~yfeaHEv----LEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~~ 110 (161)
T 2ijq_A 41 RLYNSGEFHESHDC----FEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVPN 110 (161)
T ss_dssp HHHHTTCHHHHHHH----HHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHhCCCchHHHHH----HHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCC
Confidence 34556888777444 33333333333 22345555 55666667789999999999999998887643
No 299
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=48.28 E-value=23 Score=32.11 Aligned_cols=52 Identities=12% Similarity=0.042 Sum_probs=36.5
Q ss_pred HHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhc-----CChHHHHHHHHHHHHhhc
Q 017649 278 WKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL-----GDTENAIKSMTEAVEILR 335 (368)
Q Consensus 278 ~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~-----g~~~eA~~~l~kAl~i~~ 335 (368)
...|..+.++++++-.. -.-|..+.-||.+|... |+.++|+.+|+||++|--
T Consensus 179 l~~A~a~lerAleLDP~------~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP 235 (301)
T 3u64_A 179 VHAAVMMLERACDLWPS------YQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCS 235 (301)
T ss_dssp HHHHHHHHHHHHHHCTT------HHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCCC------cccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCC
Confidence 45666666666654322 22466777788888774 999999999999998653
No 300
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=48.25 E-value=29 Score=24.71 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=36.6
Q ss_pred HhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCC-CchHHHHHHHHHHHHHHHhhhh
Q 017649 307 YYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTN-SPFMKELILKLEEAQAEASYKL 363 (368)
Q Consensus 307 l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~-hp~~~~l~~~L~~~~~el~~~~ 363 (368)
-.++|.=+.-.|+|+.|+.+|+-|++-+.+..-.= .|. ...+...+..|+..+.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~---~r~kW~~~~~ei~~E~ 69 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTH---LRQKWQQVWQEINVEA 69 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHH---HHHhHHHHHHHHHHHH
Confidence 34567777788999999999999998666553322 332 3456666666665554
No 301
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=47.61 E-value=33 Score=25.26 Aligned_cols=51 Identities=22% Similarity=0.073 Sum_probs=35.5
Q ss_pred CChH-HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCC-CCchHHHHH
Q 017649 299 FHPL-LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGT-NSPFMKELI 349 (368)
Q Consensus 299 ~hp~-~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~-~hp~~~~l~ 349 (368)
++|. .+..+-..|..+...|+|++|++..++|...+...+-- ..+-+.+.+
T Consensus 9 ~spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~qa~~SL 61 (97)
T 2crb_A 9 EGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAHLSL 61 (97)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred cchhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 3444 46777788999999999999999999888666544433 344444433
No 302
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=47.47 E-value=37 Score=24.34 Aligned_cols=38 Identities=13% Similarity=0.215 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhc
Q 017649 215 KIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 252 (368)
Q Consensus 215 ~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~ 252 (368)
.+.+....+..+|...-..|++++|+.+|..+++....
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 51 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQ 51 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 34556667778888888999999999999998876543
No 303
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.42 E-value=40 Score=25.90 Aligned_cols=36 Identities=17% Similarity=0.091 Sum_probs=28.1
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcccc
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 338 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~ 338 (368)
.++.+..-|.-.-..|++++|+.+|.+|++.+....
T Consensus 17 kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 17 KAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 455556666666778999999999999999877653
No 304
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=47.29 E-value=41 Score=29.80 Aligned_cols=55 Identities=11% Similarity=0.064 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh-hhhHHHHHHHHHhhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 291 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~-~g~~~~Al~~~~~~l~~ 291 (368)
+.|...|+.+..+...-++|.||..+...-+.+.-|.. +++-++|..+.+++.+-
T Consensus 173 e~a~~aY~~A~~iA~~~L~pThPirLGLaLNfSVFyYEIln~p~~Ac~LAk~AFd~ 228 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDD 228 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 45667788888777667999999888877777665544 68899999998887653
No 305
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=47.27 E-value=12 Score=25.99 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=25.1
Q ss_pred hhhhcCccCCCCCccceeecCCCCccccCCCCCCCC
Q 017649 174 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 209 (368)
Q Consensus 174 ~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 209 (368)
.+++-+.|| .|+|.+..........|..||....
T Consensus 4 ~LLeiL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (69)
T 2pk7_A 4 KLLDILACP--ICKGPLKLSADKTELISKGAGLAYP 37 (69)
T ss_dssp CGGGTCCCT--TTCCCCEECTTSSEEEETTTTEEEE
T ss_pred HHHhheeCC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 356678897 6788887666666788999987543
No 306
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=46.05 E-value=44 Score=29.59 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh-hhhHHHHHHHHHhhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 291 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~-~g~~~~Al~~~~~~l~~ 291 (368)
+.|...|+.+..+. .-++|.||..+.+.-+.+.-|.. +++-++|..+.+++.+-
T Consensus 173 e~a~~aY~~A~~iA-~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 227 (260)
T 2npm_A 173 EDALKAYKDATVVA-KDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFEM 227 (260)
T ss_dssp HHHHHHHHHHHHHH-TTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46677888888887 77999999888877776665544 78999999998887653
No 307
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=45.57 E-value=44 Score=29.58 Aligned_cols=55 Identities=9% Similarity=0.068 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHH-hhhhHHHHHHHHHhhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILM-ELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~-~~g~~~~Al~~~~~~l~~ 291 (368)
+.|...|+.+..+...-++|.||..+.+.-+.+.-|. -+++-++|..+.+++.+-
T Consensus 152 e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd~ 207 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDE 207 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 4566778888887766799999988887777666554 468999999998887653
No 308
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=43.46 E-value=16 Score=26.03 Aligned_cols=29 Identities=38% Similarity=0.911 Sum_probs=21.7
Q ss_pred cCccCCCCCccceeecCCCCccccC-----CCCC
Q 017649 178 GYRCKDDGCSGFLLRDSDDKGFTCQ-----QCGL 206 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~~~~~~~~~C~-----~C~~ 206 (368)
..+||.+.|+..+..+++.....|. .||.
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~ 58 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGF 58 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSC
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCC
Confidence 5679988998877666555667887 7775
No 309
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=43.46 E-value=1.1e+02 Score=23.45 Aligned_cols=37 Identities=16% Similarity=0.164 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhccc
Q 017649 218 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLY 254 (368)
Q Consensus 218 ~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l 254 (368)
..+..+...|...-..|++++|+.+|..++..+...+
T Consensus 16 ~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~al 52 (117)
T 2cpt_A 16 QKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVV 52 (117)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence 3444566667677778999999999999888755443
No 310
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=42.87 E-value=14 Score=25.46 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=24.3
Q ss_pred hhhhcCccCCCCCccceeecCCCCccccCCCCCCC
Q 017649 174 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 208 (368)
Q Consensus 174 ~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 208 (368)
.+++-+.|| .|+|.+..+.......|..||...
T Consensus 6 ~LLeiL~CP--~ck~~L~~~~~~g~LvC~~c~~~Y 38 (67)
T 2jny_A 6 QLLEVLACP--KDKGPLRYLESEQLLVNERLNLAY 38 (67)
T ss_dssp GGTCCCBCT--TTCCBCEEETTTTEEEETTTTEEE
T ss_pred HHHHHhCCC--CCCCcCeEeCCCCEEEcCCCCccc
Confidence 456678886 678888776666678899998644
No 311
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=42.08 E-value=93 Score=29.61 Aligned_cols=70 Identities=14% Similarity=-0.005 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChH-HHHHHhhhhhHhhhcCChHHHHHHHHHHHHh
Q 017649 261 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPL-LGLQYYTCGKLEWFLGDTENAIKSMTEAVEI 333 (368)
Q Consensus 261 l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~-~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i 333 (368)
..+....|+.+|...|+|.+|..+...+.. ..+|..... ..-.+....+++...+++..|...+.++...
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~---Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQV---ETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHH---HHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHH---HHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 345667899999999999999998777653 355654443 3445566788899999999999999998643
No 312
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=41.76 E-value=44 Score=23.86 Aligned_cols=37 Identities=8% Similarity=0.147 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhc
Q 017649 216 IASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 252 (368)
Q Consensus 216 ~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~ 252 (368)
+.+..-.+...|...-..|++++|+.+|..++..+..
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~ 43 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQ 43 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3445566777888888999999999999998876544
No 313
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=40.51 E-value=50 Score=29.37 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHhhccc--CCccccHHHHHHHHHHHHHh-hhhHHHHHHHHHhhhhh
Q 017649 237 QEVVSTYKMIEKLQKKLY--HPFSVNLMQTREKLIKILME-LEDWKEALAYCQLTIPV 291 (368)
Q Consensus 237 ~eA~~l~~~~l~~~~~~l--~~~h~~l~~~~~~La~~~~~-~g~~~~Al~~~~~~l~~ 291 (368)
+.|.+.|+.+..+...-+ +|.||..+...-+.+.-|.. +++-++|..+.+++.+-
T Consensus 169 e~a~~aYq~A~eiA~~~L~~~pThPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 169 KQAVEFYEDALQRERSFLEKYPSDPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGGCHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 456677888877766668 99999988887777766554 68999999999988765
No 314
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=39.60 E-value=14 Score=25.85 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=23.8
Q ss_pred hhhcCccCCCCCccceeecCCCCccccCCCCCCCC
Q 017649 175 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 209 (368)
Q Consensus 175 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 209 (368)
+++-+.|| .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (70)
T 2js4_A 5 LLDILVCP--VCKGRLEFQRAQAELVCNADRLAFP 37 (70)
T ss_dssp CCCCCBCT--TTCCBEEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCEEeCCCCEEEcCCCCceec
Confidence 45577886 6888887666666788999987543
No 315
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.08 E-value=2.4e+02 Score=26.17 Aligned_cols=74 Identities=16% Similarity=0.127 Sum_probs=51.5
Q ss_pred HHHHHHhhhhHHHHHHHHHhhhhhHHhhcCC--------CChH-HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcccc
Q 017649 268 LIKILMELEDWKEALAYCQLTIPVYQRVYPQ--------FHPL-LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH 338 (368)
Q Consensus 268 La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~--------~hp~-~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~ 338 (368)
+..+.....+..+|+++...........+.. .+.. .......++..+...|+..+|.+++.++...+...-
T Consensus 82 ~~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~ 161 (393)
T 4b4t_O 82 LLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKD 161 (393)
T ss_dssp THHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccC
Confidence 3445555678899999988765544443331 1111 334556778889999999999999999999888765
Q ss_pred CCC
Q 017649 339 GTN 341 (368)
Q Consensus 339 G~~ 341 (368)
|.+
T Consensus 162 ~~~ 164 (393)
T 4b4t_O 162 SIP 164 (393)
T ss_dssp CSS
T ss_pred Ccc
Confidence 554
No 316
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=39.04 E-value=14 Score=25.62 Aligned_cols=33 Identities=21% Similarity=0.230 Sum_probs=23.4
Q ss_pred hhhcCccCCCCCccceeecCCCCccccCCCCCCCC
Q 017649 175 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 209 (368)
Q Consensus 175 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 209 (368)
+++-+.|| .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2jr6_A 5 FLDILVCP--VTKGRLEYHQDKQELWSRQAKLAYP 37 (68)
T ss_dssp SSCCCBCS--SSCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45577886 5778777666566678988987543
No 317
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=38.01 E-value=13 Score=25.71 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=23.5
Q ss_pred hhhcCccCCCCCccceeecCCCCccccCCCCCCCC
Q 017649 175 ILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 209 (368)
Q Consensus 175 ~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 209 (368)
+++-+.|| .|+|.+..........|..||....
T Consensus 5 LL~iL~CP--~ck~~L~~~~~~~~LiC~~cg~~YP 37 (68)
T 2hf1_A 5 FLEILVCP--LCKGPLVFDKSKDELICKGDRLAFP 37 (68)
T ss_dssp CEEECBCT--TTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhhheECC--CCCCcCeEeCCCCEEEcCCCCcEec
Confidence 45577886 6778777666566678999987543
No 318
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=37.90 E-value=94 Score=28.65 Aligned_cols=82 Identities=9% Similarity=-0.009 Sum_probs=45.8
Q ss_pred ChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHhhhhHH--------HHHHHHHhhhhhHHhhcCCCChHHHHH
Q 017649 235 NHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILMELEDWK--------EALAYCQLTIPVYQRVYPQFHPLLGLQ 306 (368)
Q Consensus 235 ~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~~g~~~--------~Al~~~~~~l~~~e~~~g~~hp~~~~~ 306 (368)
+++++++.+.+++. .+|.|+. +...-..++...|.++ ++++++.+.++. .|.+ -.+
T Consensus 140 ~~~~EL~~~~k~L~-----~dpkNy~---AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~----dp~N----~SA 203 (349)
T 3q7a_A 140 DPVSEIEYIHGSLL-----PDPKNYH---TWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV----DGRN----NSA 203 (349)
T ss_dssp CCHHHHHHHHHHTS-----SCTTCHH---HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHH----CTTC----HHH
T ss_pred ChHHHHHHHHHHHH-----hCCCCHH---HHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHh----CCCC----HHH
Confidence 55666666555543 2343433 3444444455555555 888888888763 2322 233
Q ss_pred HhhhhhHhhhcCC-------hHHHHHHHHHHHH
Q 017649 307 YYTCGKLEWFLGD-------TENAIKSMTEAVE 332 (368)
Q Consensus 307 l~~La~l~~~~g~-------~~eA~~~l~kAl~ 332 (368)
.+..+.+...+++ ++++++++.+|+.
T Consensus 204 W~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~ 236 (349)
T 3q7a_A 204 WGWRWYLRVSRPGAETSSRSLQDELIYILKSIH 236 (349)
T ss_dssp HHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 4444555555554 5788888777764
No 319
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=37.41 E-value=23 Score=24.77 Aligned_cols=30 Identities=20% Similarity=0.449 Sum_probs=17.7
Q ss_pred cCccCCCCCccceeecCCCCccccCCCCCCCC
Q 017649 178 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVRS 209 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~~ 209 (368)
.+.|+ .|+..-+.......|.|..|+..+.
T Consensus 26 ky~C~--fCgk~~vkR~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 26 RYDCS--FCGKKTVKRGAAGIWTCSCCKKTVA 55 (72)
T ss_dssp CBCCS--SCCSSCBSBCSSSCBCCSSSCCCCC
T ss_pred CccCC--CCCCceeEecCCCeEECCCCCCEEe
Confidence 45664 4443323233345799999998663
No 320
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.34 E-value=14 Score=26.28 Aligned_cols=19 Identities=21% Similarity=0.399 Sum_probs=16.0
Q ss_pred EEEEccCCCCCCeeEEecc
Q 017649 117 VVRAVQHVPKGAEVLISYI 135 (368)
Q Consensus 117 ~~~a~~~i~~geel~~~Y~ 135 (368)
.++|.++|++||.|+-.=+
T Consensus 8 slvA~rdI~~Gevit~~dl 26 (79)
T 1wvo_A 8 SVVAKVKIPEGTILTMDML 26 (79)
T ss_dssp EEEESSCBCTTCBCCGGGE
T ss_pred EEEEeCccCCCCCcCHHHe
Confidence 6789999999999886653
No 321
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=36.90 E-value=60 Score=25.92 Aligned_cols=42 Identities=10% Similarity=0.032 Sum_probs=30.9
Q ss_pred HHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchH
Q 017649 303 LGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFM 345 (368)
Q Consensus 303 ~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~ 345 (368)
+|..+++.|.++...|+.+.|--+|.++..++.... |.||.+
T Consensus 39 ta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~I-pkHpdy 80 (146)
T 2xze_A 39 SGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKL-PKHRDY 80 (146)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTG-GGSTTT
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHc-ccCccc
Confidence 455667778889999999999999999888775332 335544
No 322
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=36.42 E-value=35 Score=23.95 Aligned_cols=29 Identities=24% Similarity=0.466 Sum_probs=18.0
Q ss_pred CccccCCCCCCC-CHHHHHHHHHHHHHHHH
Q 017649 197 KGFTCQQCGLVR-SKEEIKKIASEVNILSK 225 (368)
Q Consensus 197 ~~~~C~~C~~~~-~~~~~~~~~~~~~~l~~ 225 (368)
..|.|..||... +.++.+++.+.+..+..
T Consensus 35 p~~~C~~CGE~~~~~e~~~~~~~~~~~f~~ 64 (78)
T 3ga8_A 35 HGLYCVHCEESIMNKEESDAFMAQVKAFRA 64 (78)
T ss_dssp EEEEETTTCCEECCHHHHHHHHHHHHHHHH
T ss_pred eeEECCCCCCEEECHHHHHHHHHHHHHHHH
Confidence 468999999865 55555555444444333
No 323
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=35.87 E-value=56 Score=23.97 Aligned_cols=78 Identities=15% Similarity=0.034 Sum_probs=45.2
Q ss_pred HHHHhhhhHHHHHHHHHhhhhhHHhhcCC--CChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHH
Q 017649 270 KILMELEDWKEALAYCQLTIPVYQRVYPQ--FHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKE 347 (368)
Q Consensus 270 ~~~~~~g~~~~Al~~~~~~l~~~e~~~g~--~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~ 347 (368)
..+.+.|+|-+|=+..+. .-+..+. .....|+.....|......|+. |..++.+|+..++...+. +.-.+
T Consensus 9 ~~lfn~g~~~eaHEvlE~----~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~~L~~~~~~--~~gid 80 (94)
T 2cwy_A 9 LGLWRAGRYYEVHEVLEP----YWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEARLEGLPCP--LMGLD 80 (94)
T ss_dssp HHHHHTTCHHHHHHHHHH----HHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHHHHTTCCSS--BTTBC
T ss_pred HHHHhCCChHHHHHHHHH----HHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHHHHHhCCCc--cCCcC
Confidence 345556888777444333 3233321 2223456666666666677887 999999999988876443 33344
Q ss_pred HHHHHHHH
Q 017649 348 LILKLEEA 355 (368)
Q Consensus 348 l~~~L~~~ 355 (368)
+...+..+
T Consensus 81 v~~L~~~~ 88 (94)
T 2cwy_A 81 WRSLLQEA 88 (94)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444433
No 324
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=35.51 E-value=45 Score=27.67 Aligned_cols=53 Identities=9% Similarity=0.004 Sum_probs=40.0
Q ss_pred HHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhh
Q 017649 269 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEIL 334 (368)
Q Consensus 269 a~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~ 334 (368)
+......|+++.|.++++.+ +. -..+.+||......|+++-|+..|+++-+.-
T Consensus 12 F~LAL~lg~l~~A~e~a~~l----------~~---~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~ 64 (177)
T 3mkq_B 12 FDLALEYGNLDAALDEAKKL----------ND---SITWERLIQEALAQGNASLAEMIYQTQHSFD 64 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHH----------CC---HHHHHHHHHHHHHTTCHHHHHHHHHHTTCHH
T ss_pred HHHHHhcCCHHHHHHHHHHh----------CC---HHHHHHHHHHHHHcCChHHHHHHHHHhCCHH
Confidence 34456789999999987654 12 2457789999999999999999988865543
No 325
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=35.00 E-value=53 Score=31.09 Aligned_cols=71 Identities=11% Similarity=0.046 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc
Q 017649 261 LMQTREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 261 l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~ 336 (368)
+..+...+|..|.+.|++++|.+.+.++.+ ...+..|. .-.++.+..++...+++..+..++.||..+...
T Consensus 130 ~~~~~~~la~~~~~~Gd~~~A~~~~~~~~~---~~~~~~~k--id~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~ 200 (429)
T 4b4t_R 130 QAQAWINLGEYYAQIGDKDNAEKTLGKSLS---KAISTGAK--IDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEK 200 (429)
T ss_dssp CSSCCHHHHHHHHHHCCCTTHHHHHHHHHH---HHTCCCSH--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---hcCChHHH--HHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhc
Confidence 344566799999999999999999888665 34555543 345666777888899999999999999877654
No 326
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=34.59 E-value=1.3e+02 Score=24.02 Aligned_cols=43 Identities=16% Similarity=0.086 Sum_probs=32.4
Q ss_pred HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHH
Q 017649 302 LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMK 346 (368)
Q Consensus 302 ~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~ 346 (368)
..|..++..|.++...|+.+.|--+|-+-..++. .=+.||.++
T Consensus 40 rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~--kIpkHpdyk 82 (144)
T 2a9u_A 40 HSALKIFKTAEECRLDRDEERAYVLYMKYVTVYN--LIKKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH--HHTTSHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH--HHhcCcchh
Confidence 3456677778888888988999888888888774 336777665
No 327
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=34.05 E-value=1.5e+02 Score=28.11 Aligned_cols=49 Identities=20% Similarity=0.199 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHh
Q 017649 264 TREKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLE 314 (368)
Q Consensus 264 ~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~ 314 (368)
.+...+..+...+.|+.|+.+|+.++..|+.. .+--.++..+..++++|
T Consensus 90 ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~--~dy~~Ls~~~~~~a~~y 138 (428)
T 2wm9_A 90 LLEQCADGLWKAERYELIADIYKLIIPIYEKR--RDFERLAHLYDTLHRAY 138 (428)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHT--TCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHH
Confidence 34445555666788999999999999999986 34444555555555555
No 328
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.95 E-value=1.6e+02 Score=22.46 Aligned_cols=44 Identities=14% Similarity=0.210 Sum_probs=22.8
Q ss_pred hHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcc
Q 017649 277 DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRI 336 (368)
Q Consensus 277 ~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~ 336 (368)
.+.+|..+..++|.+-|. .++..|+.+| .+++..|.+++.|-..
T Consensus 18 ~h~~AF~~Is~AL~~DE~----g~k~~Al~lY------------k~GI~eLe~Gl~I~~~ 61 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL----GQKEEAKNYY------------KQGIGHLLRGISISSK 61 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH----TCHHHHHHHH------------HHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHHHhhhhhc----CCHHHHHHHH------------HHHHHHHHHhcccccc
Confidence 445666666666665552 4444443333 3445555566655543
No 329
>2ra1_A Surface layer protein; triple coiled-coil, S-layer protein, protein binding, sugar protein; 2.41A {Geobacillus stearothermophilus}
Probab=32.77 E-value=3.1e+02 Score=25.62 Aligned_cols=84 Identities=18% Similarity=0.185 Sum_probs=57.7
Q ss_pred HHhhhhHHHHHHHHHhhh-------hhHHhhcCCCChHHHHHHhhh---------------------hhHhhhcCChHHH
Q 017649 272 LMELEDWKEALAYCQLTI-------PVYQRVYPQFHPLLGLQYYTC---------------------GKLEWFLGDTENA 323 (368)
Q Consensus 272 ~~~~g~~~~Al~~~~~~l-------~~~e~~~g~~hp~~~~~l~~L---------------------a~l~~~~g~~~eA 323 (368)
.+..|+++++.+++.+.. -++.|+||..-+......|.. +..+...|++.+|
T Consensus 113 ai~~~dl~~a~~~YHklsyeikk~avll~RVYG~stRe~il~~fk~pA~~l~~~~~y~Itv~~~~~~~~~a~~~g~l~~a 192 (412)
T 2ra1_A 113 AVDAKDLKKAEELYHKISYELKTRTVILDRVYGQSTRELLRSTFKADAQALRDRLIYDITVAMKAREAQDAVKAGNLDKA 192 (412)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSTHHHHTSSCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HhhhccHHHHHHHhhhhhHhhhhcEEEEecccChhHHHHHHHHhhchHHHHHHHhhhHHHHHHHHHHHHHHhccCcHHHH
Confidence 346688888877665432 255688998777776666665 2223456999999
Q ss_pred HHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHH
Q 017649 324 IKSMTEAVEILRITHGTNSPFMKELILKLEEAQAE 358 (368)
Q Consensus 324 ~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~e 358 (368)
...+..+-+.+... ...+-.+|....+.+...
T Consensus 193 ~~~l~~v~~~l~kv---~d~FkaeL~~aa~~a~~a 224 (412)
T 2ra1_A 193 KAALDQVNQYVSKV---TDAFKAELQKAAQDAKAA 224 (412)
T ss_dssp HHHHHHHHHHGGGC---CSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh---hHHHHHHHHHhhhhhhhh
Confidence 99999999988877 344667777666555443
No 330
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.57 E-value=18 Score=23.35 Aligned_cols=26 Identities=19% Similarity=0.621 Sum_probs=15.3
Q ss_pred ccCCCCCccceeecCCCCccccCCCCCC
Q 017649 180 RCKDDGCSGFLLRDSDDKGFTCQQCGLV 207 (368)
Q Consensus 180 ~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 207 (368)
-|| .|+..+.-.+....+.|..||.+
T Consensus 21 ~CP--~CG~~~fm~~~~~R~~C~kCG~t 46 (50)
T 3j20_Y 21 FCP--RCGPGVFMADHGDRWACGKCGYT 46 (50)
T ss_dssp ECS--SSCSSCEEEECSSEEECSSSCCE
T ss_pred cCC--CCCCceEEecCCCeEECCCCCCE
Confidence 465 47542222223457899999974
No 331
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=31.48 E-value=1.8e+02 Score=23.07 Aligned_cols=81 Identities=5% Similarity=-0.007 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcccCCccccHHHHHHHHHHHHHh-------------hhhHHHH
Q 017649 215 KIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKKLYHPFSVNLMQTREKLIKILME-------------LEDWKEA 281 (368)
Q Consensus 215 ~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~l~~~h~~l~~~~~~La~~~~~-------------~g~~~~A 281 (368)
-+.+.+-.....|.....+|+++++-....++..+...+-..-+.. ..+..+|..+|.. ....+++
T Consensus 28 mLydgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~eL~~sLd~e-geiA~nL~~LY~y~~~~L~~Ani~~D~~~ldev 106 (145)
T 1vh6_A 28 MLYNGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQELNFTLNRN-IELSASMGAMYDYMYRRLVQANIKNDTGMLAEV 106 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHcCCc-hHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHH
Confidence 3445555566677777888999888777777666543322211222 4445555555532 1234566
Q ss_pred HHHHHhhhhhHHhhc
Q 017649 282 LAYCQLTIPVYQRVY 296 (368)
Q Consensus 282 l~~~~~~l~~~e~~~ 296 (368)
..+...+.+.++.+.
T Consensus 107 ~~ll~~LreaW~~i~ 121 (145)
T 1vh6_A 107 EGYVTDFRDAWKQAI 121 (145)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666666553
No 332
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=31.19 E-value=2.5e+02 Score=24.08 Aligned_cols=39 Identities=10% Similarity=-0.113 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHhhc
Q 017649 214 KKIASEVNILSKKTLALTSCGNHQEVVSTYKMIEKLQKK 252 (368)
Q Consensus 214 ~~~~~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~ 252 (368)
.+..+.+....+..+...++.+|++|+++.+++......
T Consensus 12 ~~~~~wl~~~~deLDv~IA~r~feeAv~lle~~~~~l~~ 50 (235)
T 2d2s_A 12 AQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLED 50 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHcccHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 344445556666777788899999999999888776544
No 333
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=29.57 E-value=36 Score=25.51 Aligned_cols=13 Identities=15% Similarity=0.437 Sum_probs=9.6
Q ss_pred CCccccCCCCCCC
Q 017649 196 DKGFTCQQCGLVR 208 (368)
Q Consensus 196 ~~~~~C~~C~~~~ 208 (368)
...|.|..|+..+
T Consensus 52 ~GIW~C~kCg~~~ 64 (103)
T 4a17_Y 52 VGIWKCKPCKKII 64 (103)
T ss_dssp TTEEEETTTTEEE
T ss_pred cceEEcCCCCCEE
Confidence 4569999998644
No 334
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=28.77 E-value=1.1e+02 Score=29.18 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=28.2
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
++.-.-+..-+|++|+..|+|++|.++++.++..
T Consensus 186 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 186 RMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 4445556777999999999999999999999864
No 335
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=28.43 E-value=35 Score=24.48 Aligned_cols=24 Identities=29% Similarity=0.588 Sum_probs=12.5
Q ss_pred ccCCCCCccceeecCCCCccccCCCC
Q 017649 180 RCKDDGCSGFLLRDSDDKGFTCQQCG 205 (368)
Q Consensus 180 ~C~~~~C~g~~~~~~~~~~~~C~~C~ 205 (368)
.|| +|...+..+++.....|..|+
T Consensus 27 wCP--~C~~~~~~~~~~~~v~C~~C~ 50 (86)
T 2ct7_A 27 WCA--QCSFGFIYEREQLEATCPQCH 50 (86)
T ss_dssp CCS--SSCCCEECCCSCSCEECTTTC
T ss_pred ECc--CCCchheecCCCCceEeCCCC
Confidence 466 566555444433345555554
No 336
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=27.95 E-value=2e+02 Score=23.98 Aligned_cols=76 Identities=14% Similarity=0.061 Sum_probs=47.7
Q ss_pred cCCccccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh--H----------HhhcCCCChHHHHHHhhhhhHhhhcCChH
Q 017649 254 YHPFSVNLMQTREKLIKILMELEDWKEALAYCQLTIPV--Y----------QRVYPQFHPLLGLQYYTCGKLEWFLGDTE 321 (368)
Q Consensus 254 l~~~h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~--~----------e~~~g~~hp~~~~~l~~La~l~~~~g~~~ 321 (368)
++..|..+..-...| +|-...+|.+|+...+..++. - +....+..-+ .-+.-+|.++...|..+
T Consensus 56 L~~lNT~Ts~YYk~L--Cy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkE--fFy~l~a~lltq~g~r~ 131 (242)
T 3kae_A 56 LHKLNTCTSKYYESL--CYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEE--FFESLLGDLCTLSGYRE 131 (242)
T ss_dssp HHTCCBHHHHHHHHH--HHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHH--HHHHHHHHHHHHTTCHH
T ss_pred HHhcchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHH--HHHHHHHHHHHHhcCHH
Confidence 333444443333333 566788999999888877721 1 1122222222 34456789999999999
Q ss_pred HHHHHHHHHHHh
Q 017649 322 NAIKSMTEAVEI 333 (368)
Q Consensus 322 eA~~~l~kAl~i 333 (368)
||+.++..+..+
T Consensus 132 EaI~y~~~Sf~~ 143 (242)
T 3kae_A 132 EGIGHYVRSFGK 143 (242)
T ss_dssp HHHHHHHHHHHH
T ss_pred HhhhHhhhhcCC
Confidence 999999887653
No 337
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=27.94 E-value=83 Score=23.13 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhhHHh
Q 017649 260 NLMQTREKLIKILMELEDWKEALAYCQLTIPVYQR 294 (368)
Q Consensus 260 ~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~~e~ 294 (368)
..++.....+..+...|.|++|++..+++...+..
T Consensus 13 n~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~e 47 (97)
T 2crb_A 13 NLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSE 47 (97)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 34566777889999999999999998888765443
No 338
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=27.75 E-value=1.1e+02 Score=29.02 Aligned_cols=34 Identities=21% Similarity=0.234 Sum_probs=28.2
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
++.-.-+..-+|++|+..|+|.+|..+++.++..
T Consensus 192 r~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 192 KVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp SCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4445556777999999999999999999999874
No 339
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.45 E-value=23 Score=23.01 Aligned_cols=28 Identities=25% Similarity=0.573 Sum_probs=18.3
Q ss_pred hhhhcCccCCCCCccceeecCCCCccccCCCCCC
Q 017649 174 AILEGYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 207 (368)
Q Consensus 174 ~~~~~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 207 (368)
..+....|+ .|...+ ....|.|..||..
T Consensus 10 r~~~k~iCp--kC~a~~----~~gaw~CrKCG~~ 37 (51)
T 3j21_g 10 RIFKKYVCL--RCGATN----PWGAKKCRKCGYK 37 (51)
T ss_dssp HSSSEEECT--TTCCEE----CTTCSSCSSSSSC
T ss_pred HHhCCccCC--CCCCcC----CCCceecCCCCCc
Confidence 344566776 565542 2456999999985
No 340
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=26.94 E-value=3.6e+02 Score=24.47 Aligned_cols=27 Identities=22% Similarity=0.284 Sum_probs=21.4
Q ss_pred HHHHHHhhhcCChHHHHHHHHHHHHHh
Q 017649 224 SKKTLALTSCGNHQEVVSTYKMIEKLQ 250 (368)
Q Consensus 224 ~~~a~~~~~~g~~~eA~~l~~~~l~~~ 250 (368)
++.+-++...|++++|+..++.++...
T Consensus 106 Lk~gyk~~t~gKf~eAl~~Fr~iL~~i 132 (320)
T 3mkr_B 106 LQLCYQLTTVGKFEEAVEKFRSILLSV 132 (320)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 445666788999999999999887643
No 341
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=26.50 E-value=2.4e+02 Score=22.33 Aligned_cols=38 Identities=16% Similarity=0.020 Sum_probs=30.5
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHH
Q 017649 265 REKLIKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLG 304 (368)
Q Consensus 265 ~~~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~ 304 (368)
+..-|..|...||.+.|.-++-+.+..+..+ +.||..-
T Consensus 45 L~r~A~~y~~EGd~E~AYilymRy~~L~~kI--pkHpdyk 82 (144)
T 2a9u_A 45 IFKTAEECRLDRDEERAYVLYMKYVTVYNLI--KKRPDFK 82 (144)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--TTSHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--hcCcchh
Confidence 3345778899999999999999998888543 6888874
No 342
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=26.26 E-value=28 Score=36.03 Aligned_cols=30 Identities=20% Similarity=0.553 Sum_probs=16.1
Q ss_pred CccCCCCCccceee----cCCCCccccCCCCCCC
Q 017649 179 YRCKDDGCSGFLLR----DSDDKGFTCQQCGLVR 208 (368)
Q Consensus 179 ~~C~~~~C~g~~~~----~~~~~~~~C~~C~~~~ 208 (368)
.+|..+.|++++.| +..++.|+|+.|+...
T Consensus 54 vRC~~~~CrayiNPf~~~~~~~~~W~C~~C~~~N 87 (768)
T 1m2o_A 54 VVCSGPHCKSILNPYCVIDPRNSSWSCPICNSRN 87 (768)
T ss_dssp CBCCSTTTCCBCCTTSCEETTTTEECCTTTCCCC
T ss_pred CccCCCCCCeEECCceEEeCCCCEEEcccCCCCC
Confidence 34443335444432 2345678888887643
No 343
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=26.00 E-value=40 Score=26.60 Aligned_cols=28 Identities=29% Similarity=0.750 Sum_probs=20.2
Q ss_pred ccCCCCCccceeecCCC----CccccCCCCCCCC
Q 017649 180 RCKDDGCSGFLLRDSDD----KGFTCQQCGLVRS 209 (368)
Q Consensus 180 ~C~~~~C~g~~~~~~~~----~~~~C~~C~~~~~ 209 (368)
-|| .|++.+.|..+. ..|.|..||....
T Consensus 26 FCP--eCgNmL~pked~~~~~l~~~CrtCgY~~~ 57 (133)
T 3qt1_I 26 FCR--DCNNMLYPREDKENNRLLFECRTCSYVEE 57 (133)
T ss_dssp BCT--TTCCBCBCCBCTTTCCBCCBCSSSCCBCC
T ss_pred eCC--CCCCEeeECccCCCceeEEECCCCCCcEE
Confidence 475 788888776542 3599999998654
No 344
>4ard_A Capsid protein P27; viral protein, retrovirus, GAG; 7.00A {Mason-pfizer monkey virus}
Probab=25.76 E-value=54 Score=25.17 Aligned_cols=28 Identities=18% Similarity=0.417 Sum_probs=21.5
Q ss_pred HHHHHHHHHhhccccCCCCchHHHHHHHHHHH
Q 017649 324 IKSMTEAVEILRITHGTNSPFMKELILKLEEA 355 (368)
Q Consensus 324 ~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~ 355 (368)
++-+++|. ..||+.+|+++.++..|+.-
T Consensus 6 iKdLKka~----t~YG~ts~y~~~lL~~la~~ 33 (116)
T 4ard_A 6 IKELKTAA----SQYGATAPYTLAIVESVADN 33 (116)
T ss_pred HHHHHHHH----HHhCCChHHHHHHHHHHHHh
Confidence 44555665 46999999999999888763
No 345
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=25.68 E-value=2.3e+02 Score=21.78 Aligned_cols=68 Identities=7% Similarity=0.099 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHH-------hhccc--------CCccccHHHHHHHHHHHHHhhhhHHHHHH
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKL-------QKKLY--------HPFSVNLMQTREKLIKILMELEDWKEALA 283 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~-------~~~~l--------~~~h~~l~~~~~~La~~~~~~g~~~~Al~ 283 (368)
..++..-.|......|+|++|.++.+.+.+. ++.++ .+.+..+.++.|.|+.+... .+
T Consensus 36 ~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l~~AH~~QT~Liq~EA~G~~~~~sLLlvHAQDhLMta~~~-------~d 108 (120)
T 3l8r_A 36 NARSIVHEAFDAMREKNYILAEQKLQEANDELLKAHQAQTDLLQEYASGTEIKIEIIMVHAQDHLMTTMTL-------RE 108 (120)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccceeeehHHHHHHHHHHH-------HH
Confidence 4556666777777889999998887665431 22221 13355666788888876653 33
Q ss_pred HHHhhhhhHH
Q 017649 284 YCQLTIPVYQ 293 (368)
Q Consensus 284 ~~~~~l~~~e 293 (368)
+.+..+++|+
T Consensus 109 La~e~I~lyk 118 (120)
T 3l8r_A 109 VAIEMLELYK 118 (120)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 4444555554
No 346
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=24.84 E-value=4.1e+02 Score=24.49 Aligned_cols=60 Identities=17% Similarity=-0.043 Sum_probs=36.7
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHhhcccc-----CCCCchHHHHHHHHHHHHHHHhhhh
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITH-----GTNSPFMKELILKLEEAQAEASYKL 363 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~-----G~~hp~~~~l~~~L~~~~~el~~~~ 363 (368)
+.+++..|..+...+++.+|+..|+.|.+.+.... -.++.....+...+.........+|
T Consensus 257 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~~~d~~~l~~~i~~~l~~a~kdN 321 (392)
T 1zb1_A 257 SLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSLPFKTWLVEFIDFDGFKETLEKKQKELIKDN 321 (392)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHGGGCTTTTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555567777778899999999998887655432 1223334455555555555555544
No 347
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=24.78 E-value=28 Score=22.90 Aligned_cols=28 Identities=18% Similarity=0.553 Sum_probs=16.9
Q ss_pred cCccCCCCCccceeecCCCCccccCCCCCC
Q 017649 178 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLV 207 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 207 (368)
...|| .|++.+........+.|..||.+
T Consensus 18 ~~fCP--kCG~~~~ma~~~dr~~C~kCgyt 45 (55)
T 2k4x_A 18 HRFCP--RCGPGVFLAEHADRYSCGRCGYT 45 (55)
T ss_dssp SCCCT--TTTTTCCCEECSSEEECTTTCCC
T ss_pred cccCc--CCCCceeEeccCCEEECCCCCCE
Confidence 35676 57653332222347899999975
No 348
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=24.46 E-value=5e+02 Score=25.28 Aligned_cols=74 Identities=9% Similarity=-0.033 Sum_probs=35.5
Q ss_pred hHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHh-hc--cccCCCCchHHHHHHHHH
Q 017649 277 DWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEI-LR--ITHGTNSPFMKELILKLE 353 (368)
Q Consensus 277 ~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i-~~--~~~G~~hp~~~~l~~~L~ 353 (368)
++++-+.+.+.-++..- -.+...-.+|..+.....+++-++..-.++-+- .. ..|--|+..|.+++..|+
T Consensus 114 ELRRrIqyLKekVdnQl-------snIrvLQsnLedq~~kIQRLEvDIdiqirsCKgsCsr~~~~~vd~~sY~~~QKQLe 186 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKV-------QHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAREVDLKDYEDQQKQLE 186 (562)
T ss_dssp HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTBSCCCCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchheeecchHHHHHHHHHHH
Confidence 55555555555443221 112233334444444445555555443332221 11 224556777788887777
Q ss_pred HHHH
Q 017649 354 EAQA 357 (368)
Q Consensus 354 ~~~~ 357 (368)
++.+
T Consensus 187 Qv~a 190 (562)
T 3ghg_A 187 QVIA 190 (562)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 7653
No 349
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=24.24 E-value=4.2e+02 Score=24.35 Aligned_cols=32 Identities=22% Similarity=0.260 Sum_probs=25.0
Q ss_pred HHHHhhhhhHhhhcCChHHHHHHHHHHHHhhc
Q 017649 304 GLQYYTCGKLEWFLGDTENAIKSMTEAVEILR 335 (368)
Q Consensus 304 ~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~ 335 (368)
+..++..|..+...+++.+|+..|+.|.+.++
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~ 284 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKLYA 284 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 55666667777778999999999888877665
No 350
>3k7a_M Transcription initiation factor IIB; RNA polymerase II, TFIIB, DNA-binding, DNA- directed RNA polymerase, isopeptide bond, magnesium; 3.80A {Saccharomyces cerevisiae}
Probab=24.24 E-value=46 Score=30.67 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=18.2
Q ss_pred cCccCCCCCcc-ceeecCCCCccccCCCCCCCC
Q 017649 178 GYRCKDDGCSG-FLLRDSDDKGFTCQQCGLVRS 209 (368)
Q Consensus 178 ~~~C~~~~C~g-~~~~~~~~~~~~C~~C~~~~~ 209 (368)
...||.|++.+ -+..+.......|..||..++
T Consensus 21 ~~~Cp~Cg~~~~~iv~D~~~G~~vC~~CG~Vl~ 53 (345)
T 3k7a_M 21 VLTCPECKVYPPKIVERFSEGDVVCALCGLVLS 53 (345)
T ss_dssp CCCCSTTCCSCCCCCCCSSSCSCCCSSSCCCCC
T ss_pred CCcCcCCCCCCCceEEECCCCCEecCCCCeEcc
Confidence 45676443322 243444455678888887665
No 351
>1l1o_C Replication protein A 70 kDa DNA-binding subunit; eukaryotic SSB, ssDNA binding protein, OB-fold; 2.80A {Homo sapiens} SCOP: b.40.4.3
Probab=24.18 E-value=24 Score=29.30 Aligned_cols=28 Identities=14% Similarity=0.577 Sum_probs=13.4
Q ss_pred CccCCCCCccceeecCCCCccccCCCCCC
Q 017649 179 YRCKDDGCSGFLLRDSDDKGFTCQQCGLV 207 (368)
Q Consensus 179 ~~C~~~~C~g~~~~~~~~~~~~C~~C~~~ 207 (368)
..|+...|...+... +...|.|..|+..
T Consensus 44 ~aC~~~~CnKKv~~~-~~g~~~CekC~~~ 71 (181)
T 1l1o_C 44 QACPTQDCNKKVIDQ-QNGLYRCEKCDTE 71 (181)
T ss_dssp EBCCSTTCCCBCEEE-TTTEEEETTTTEE
T ss_pred CCCCchhcCCccccC-CCCeEECCCCCCc
Confidence 355544454444322 2234666666654
No 352
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=24.11 E-value=32 Score=35.59 Aligned_cols=15 Identities=20% Similarity=0.319 Sum_probs=10.0
Q ss_pred CCCCccccCCCCCCC
Q 017649 194 SDDKGFTCQQCGLVR 208 (368)
Q Consensus 194 ~~~~~~~C~~C~~~~ 208 (368)
..++.|+|+.|+...
T Consensus 82 ~~~~~W~C~~C~~~N 96 (769)
T 2nut_A 82 YRAKLWACNFCYQRN 96 (769)
T ss_dssp TTTTEEECSSSCCEE
T ss_pred CCCCEEEccCCCCCC
Confidence 345678888887643
No 353
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=23.89 E-value=57 Score=23.13 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=26.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHhhhhhHHhhcCC
Q 017649 267 KLIKILMELEDWKEALAYCQLTIPVYQRVYPQ 298 (368)
Q Consensus 267 ~La~~~~~~g~~~~Al~~~~~~l~~~e~~~g~ 298 (368)
.+|+=|.-.|+|+.|+.|++.+++...+....
T Consensus 17 k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~ 48 (78)
T 2rpa_A 17 KLAREYALLGNYDSAMVYYQGVLDQMNKYLYS 48 (78)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 46777788899999999999999877776653
No 354
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=23.85 E-value=80 Score=23.55 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=13.3
Q ss_pred cccCCCCCCCCHHHHHHHH
Q 017649 199 FTCQQCGLVRSKEEIKKIA 217 (368)
Q Consensus 199 ~~C~~C~~~~~~~~~~~~~ 217 (368)
-.|+.||...+........
T Consensus 48 ~~CPvCgs~l~~~~~~~~i 66 (112)
T 1l8d_A 48 GKCPVCGRELTDEHREELL 66 (112)
T ss_dssp EECTTTCCEECHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHH
Confidence 4699999998875444333
No 355
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=23.66 E-value=44 Score=25.44 Aligned_cols=29 Identities=21% Similarity=0.591 Sum_probs=20.3
Q ss_pred ccCCCCCccceeecCCC----CccccCCCCCCCCH
Q 017649 180 RCKDDGCSGFLLRDSDD----KGFTCQQCGLVRSK 210 (368)
Q Consensus 180 ~C~~~~C~g~~~~~~~~----~~~~C~~C~~~~~~ 210 (368)
-|+ .|++.+.|..+. ..+.|..||.....
T Consensus 6 FCp--~Cgn~L~~~~~~~~~~~~~~C~~C~y~~~~ 38 (113)
T 3h0g_I 6 YCI--ECNNMLYPREDKVDRVLRLACRNCDYSEIA 38 (113)
T ss_dssp CCS--SSCCCCEECCCTTTCCCCEECSSSCCEECC
T ss_pred eCc--CCCCEeeEcccCCCCeeEEECCCCCCeEEc
Confidence 364 688888776542 36899999986543
No 356
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.62 E-value=23 Score=25.54 Aligned_cols=29 Identities=21% Similarity=0.470 Sum_probs=16.1
Q ss_pred cCccCCCCCccceeecCCCCccccCCCCCCC
Q 017649 178 GYRCKDDGCSGFLLRDSDDKGFTCQQCGLVR 208 (368)
Q Consensus 178 ~~~C~~~~C~g~~~~~~~~~~~~C~~C~~~~ 208 (368)
.+.|+ .|+..-+.......|.|..|+..+
T Consensus 35 ky~Cp--fCGk~~vkR~a~GIW~C~kCg~~~ 63 (83)
T 3j21_i 35 KHTCP--VCGRKAVKRISTGIWQCQKCGATF 63 (83)
T ss_dssp CBCCS--SSCSSCEEEEETTEEEETTTCCEE
T ss_pred ccCCC--CCCCceeEecCcCeEEcCCCCCEE
Confidence 45564 343322222234569999998754
No 357
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=23.44 E-value=2e+02 Score=20.43 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=25.2
Q ss_pred HHHHHHHHHhhhcCChHHHHHHHHHHHHHhhcc
Q 017649 221 NILSKKTLALTSCGNHQEVVSTYKMIEKLQKKL 253 (368)
Q Consensus 221 ~~l~~~a~~~~~~g~~~eA~~l~~~~l~~~~~~ 253 (368)
..+...|...-..|++++|+.+|..++..+...
T Consensus 17 ~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~a 49 (86)
T 4a5x_A 17 ATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 49 (86)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 345566767778899999999999988765443
No 358
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=23.35 E-value=4.2e+02 Score=24.05 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=0.0
Q ss_pred CCccccHHHHHH-HHHHHHHhhhhHHHHHHHHH-------------hhhhhHHhhcC--CCCh-----------------
Q 017649 255 HPFSVNLMQTRE-KLIKILMELEDWKEALAYCQ-------------LTIPVYQRVYP--QFHP----------------- 301 (368)
Q Consensus 255 ~~~h~~l~~~~~-~La~~~~~~g~~~~Al~~~~-------------~~l~~~e~~~g--~~hp----------------- 301 (368)
||+...-..+++ .++.-+...|+|+.|+.++. ..+++|....- +.-|
T Consensus 20 ~~~~~~~~W~~nS~laadhvAAGsFetAm~lLnrQvGivnf~PLk~~F~~~y~~s~~~l~~~~~~lp~l~~~~~r~~~e~ 99 (325)
T 3mv2_A 20 GPHMETAIWIKNSKLPAVLVAAGAFDAAVQALSKQVGVVKLEPLKKYFTNIYEGCRTYIPSTPCELPAQLGYVRAYDDTV 99 (325)
T ss_dssp -CCHHHHHHHHHCCSHHHHHHTTCHHHHHHHHHHHHCBCCCGGGHHHHHHHHHHTEEEECCSSTTSCCEEEECBSSCSSS
T ss_pred CCCcHHHHHHHcCCcHHHHHHccCHHHHHHHHHHHhCccCchhhHHHHHHHHHHHhhhcccCCCCCCcchhhhcCCcccc
Q ss_pred ------------HHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHH
Q 017649 302 ------------LLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQA 357 (368)
Q Consensus 302 ------------~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~ 357 (368)
.......+.|--+...|++++|+..++..+..+-..--.+.....++.+.+.-+..
T Consensus 100 ~~~~~lP~i~~l~~L~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrE 167 (325)
T 3mv2_A 100 SEDQILPYVPGLDVVNEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETARE 167 (325)
T ss_dssp CGGGCCBCCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHH
No 359
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=23.07 E-value=2.4e+02 Score=21.18 Aligned_cols=70 Identities=16% Similarity=0.258 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhhhcCChHHHHHHHHHHHHH-------hhccc--------CCccccHHHHHHHHHHHHHhhhhHHHHHH
Q 017649 219 EVNILSKKTLALTSCGNHQEVVSTYKMIEKL-------QKKLY--------HPFSVNLMQTREKLIKILMELEDWKEALA 283 (368)
Q Consensus 219 ~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~-------~~~~l--------~~~h~~l~~~~~~La~~~~~~g~~~~Al~ 283 (368)
..++..-.|......|+|++|.++.+.+... ++.++ .+.+..+.++.|+|+.+... .+
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~~AH~~QT~Liq~Ea~g~~~~~slLlvHAQDhLMta~~~-------~~ 93 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEAINEAHHFQTELIQSEARGEKTEISVLLIHAQDHLMNAITV-------KE 93 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHHHHHHHHH-------HH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCeeehhHHHHHHHHHHH-------HH
Confidence 4556666677777889999998877665331 22221 13355667888888876653 34
Q ss_pred HHHhhhhhHHhh
Q 017649 284 YCQLTIPVYQRV 295 (368)
Q Consensus 284 ~~~~~l~~~e~~ 295 (368)
+.+..++.|+++
T Consensus 94 la~e~I~lyk~~ 105 (109)
T 3k1s_A 94 LAAEFIDLYKKL 105 (109)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 455566666654
No 360
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=22.34 E-value=26 Score=25.80 Aligned_cols=13 Identities=31% Similarity=0.769 Sum_probs=10.0
Q ss_pred CCccccCCCCCCC
Q 017649 196 DKGFTCQQCGLVR 208 (368)
Q Consensus 196 ~~~~~C~~C~~~~ 208 (368)
...|.|..|+..+
T Consensus 52 ~GIW~C~~Cg~~~ 64 (92)
T 3iz5_m 52 VGIWGCKDCGKVK 64 (92)
T ss_dssp TTEEECSSSCCEE
T ss_pred cceEEcCCCCCEE
Confidence 4569999998754
No 361
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=21.98 E-value=1e+02 Score=30.96 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=36.7
Q ss_pred HHHHHhhhhHHHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhcCChHHHHHHHHHH
Q 017649 269 IKILMELEDWKEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFLGDTENAIKSMTEA 330 (368)
Q Consensus 269 a~~~~~~g~~~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~g~~~eA~~~l~kA 330 (368)
+......|+|++|+++++.. .++ ....+||..+...|+++.|+..|.++
T Consensus 659 f~~~l~~~~~~~A~~~~~~~----------~~~---~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 659 FELALKVGQLTLARDLLTDE----------SAE---MKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHHTCHHHHHHHHTTC----------CCH---HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eehhhhcCCHHHHHHHHHhh----------CcH---hHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 34456678888888876543 222 35678999999999999999999885
No 362
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=21.96 E-value=3.3e+02 Score=25.89 Aligned_cols=61 Identities=15% Similarity=-0.054 Sum_probs=41.8
Q ss_pred hHHHHHHhhhhhHhhhcCChHHHHHHHHHHHHhhccccCCCCchHHHHHHHHHHHHHHHhhh
Q 017649 301 PLLGLQYYTCGKLEWFLGDTENAIKSMTEAVEILRITHGTNSPFMKELILKLEEAQAEASYK 362 (368)
Q Consensus 301 p~~~~~l~~La~l~~~~g~~~eA~~~l~kAl~i~~~~~G~~hp~~~~l~~~L~~~~~el~~~ 362 (368)
|.+...-+..|..+...|...+|.+|.+.....++.. +..+++...+...|.++...|...
T Consensus 353 p~l~~yKl~~A~~Lae~G~~~~A~~Ycdai~~~lk~~-~k~s~~~~~l~~~l~~L~~RL~~~ 413 (441)
T 3mzk_B 353 SSILPQKIYHASLLQEQGLNSLGTKYTDYLSSSVRKL-PKKDILTINLTRELSEVASRLSES 413 (441)
T ss_dssp GGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTS-CTTSHHHHHHHHHHHHHHHHTC--
T ss_pred hhHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhC-CCCCCcCHHHHHHHHHHHHHHhcC
Confidence 4444444455777778899999999888777777654 555566777777877777776653
No 363
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=21.79 E-value=2.3e+02 Score=27.52 Aligned_cols=39 Identities=18% Similarity=0.085 Sum_probs=32.0
Q ss_pred HHHHHHHHhhhhhHHhhcCCCChHHHHHHhhhhhHhhhc
Q 017649 279 KEALAYCQLTIPVYQRVYPQFHPLLGLQYYTCGKLEWFL 317 (368)
Q Consensus 279 ~~Al~~~~~~l~~~e~~~g~~hp~~~~~l~~La~l~~~~ 317 (368)
++|++.++.+++.++++-..+.|.....+.++++.|-..
T Consensus 449 ~kAi~~Y~~Ai~~L~k~~~tdd~~~v~~~~~~ak~yE~a 487 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKAAQQDDYQMFLNYLNAAKKHEMA 487 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhccCCHHHHHHHHHHhhhhhhc
Confidence 578888888888888888899999988888888776433
No 364
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=21.79 E-value=1.3e+02 Score=28.76 Aligned_cols=34 Identities=12% Similarity=0.243 Sum_probs=27.9
Q ss_pred cccHHHHHHHHHHHHHhhhhHHHHHHHHHhhhhh
Q 017649 258 SVNLMQTREKLIKILMELEDWKEALAYCQLTIPV 291 (368)
Q Consensus 258 h~~l~~~~~~La~~~~~~g~~~~Al~~~~~~l~~ 291 (368)
++.-.-+..-+|++|+..|+|++|.++++.++..
T Consensus 198 r~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 198 YINYWAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 4444556677999999999999999999998864
No 365
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=21.20 E-value=1.6e+02 Score=21.41 Aligned_cols=32 Identities=16% Similarity=0.111 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhcCChHHHHHHHHHHHHH
Q 017649 218 SEVNILSKKTLALTSCGNHQEVVSTYKMIEKL 249 (368)
Q Consensus 218 ~~~~~l~~~a~~~~~~g~~~eA~~l~~~~l~~ 249 (368)
.+++.++.+|..+...+++.+|..+++++...
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n~ 82 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALNL 82 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHcc
Confidence 46677888888899999999999999988754
No 366
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=20.91 E-value=81 Score=22.02 Aligned_cols=25 Identities=24% Similarity=0.332 Sum_probs=20.4
Q ss_pred hhhhhHhhhcCChHHHHHHHHHHHH
Q 017649 308 YTCGKLEWFLGDTENAIKSMTEAVE 332 (368)
Q Consensus 308 ~~La~l~~~~g~~~eA~~~l~kAl~ 332 (368)
..+|..+...|.+++|..++-+|+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~ 45 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIA 45 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3567778888889999999988886
No 367
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=20.34 E-value=29 Score=25.48 Aligned_cols=13 Identities=23% Similarity=0.406 Sum_probs=9.9
Q ss_pred CCccccCCCCCCC
Q 017649 196 DKGFTCQQCGLVR 208 (368)
Q Consensus 196 ~~~~~C~~C~~~~ 208 (368)
...|.|..|+..+
T Consensus 52 ~GIW~C~~C~~~~ 64 (92)
T 3izc_m 52 AGIWTCSCCKKTV 64 (92)
T ss_dssp TTEEECTTTCCEE
T ss_pred cceEEcCCCCCEE
Confidence 4569999998754
No 368
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=20.27 E-value=1.3e+02 Score=25.12 Aligned_cols=64 Identities=17% Similarity=0.249 Sum_probs=45.9
Q ss_pred hhccccccccCCCCceeEEEccccccc-cCCCccCcEEEEeCCEEEE---EEccCCCCC--CeeEEeccCCC
Q 017649 73 LACNAHTICNSELRPLGTGLYPVISII-NHSCLPNAVLVFEGRLAVV---RAVQHVPKG--AEVLISYIETA 138 (368)
Q Consensus 73 ~~~N~~~i~~~~~~~~g~~lyp~~s~~-nHsC~PN~~~~~~~~~~~~---~a~~~i~~g--eel~~~Y~~~~ 138 (368)
+.-|.++|+.....--|.|||-+..++ .|+ .|--.+..+|....+ ..+.+ ..| .||++=+++..
T Consensus 15 ~~~N~~~vtt~~g~ft~LgI~dr~~vvP~Ha-~~~~~i~i~g~~~~v~d~~~L~~-~~g~~~Elt~v~l~~~ 84 (187)
T 3qzr_A 15 LRRNVRQVQTDQGHFTMLGVRDRLAVLPRHS-QPGKTIWIEHKLVNVLDAVELVD-EQGVNLALTLITLDTN 84 (187)
T ss_dssp HHHHEEEEEETTEEEEEEEEEBTEEEEEGGG-CCCSEEEETTEEEEEEEEEECCC-TTCCCCSEEEEEECSS
T ss_pred HHcCeEEEEECCCeEEEEEEeeeEEEEeCCC-CCCCEEEECCEEEEeeeeEEEEC-CCCCEEEEEEEEcCCC
Confidence 457899988876666789999987766 799 676667778877665 33332 235 59999998753
Done!