BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017653
(368 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94AY3|DRIP2_ARATH E3 ubiquitin protein ligase DRIP2 OS=Arabidopsis thaliana GN=DRIP2
PE=1 SV=1
Length = 420
Score = 327 bits (838), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 246/409 (60%), Gaps = 55/409 (13%)
Query: 9 KVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCA 68
KV RE +VACMTCPLC KL RDATTISECLH+FCRKCIYEKITE+EI+SCPVC+ DLG
Sbjct: 8 KVKRETVVACMTCPLCDKLLRDATTISECLHTFCRKCIYEKITEDEIESCPVCDIDLGGT 67
Query: 69 PLEKLRADHNLQDLRIKIFPSKRRNLDAPDSVSSVPLPARRKEISLSSLAISTPKSPVKS 128
PLEKLR DH LQDLR K+FP KR+ AP+ VSS+ LPA+RKE S+SSL +STP+ ++
Sbjct: 68 PLEKLRPDHILQDLRAKLFPLKRKKERAPEVVSSISLPAKRKERSISSLVVSTPRVSAQA 127
Query: 129 SSSGRRSKPVPKKTLVQE----EYTSPIEEPIKDVEDPPELSSEPLCRNTQTKRQILSAA 184
++G+R+K +K + + T EE D S E L + TQ KRQ S+
Sbjct: 128 GTTGKRTKAATRKDVRGSGSFTKRTVKKEEEFGDDHVESASSPETLKKFTQNKRQ--SSY 185
Query: 185 ESSIQHTPDKGTEDIARPFDGKSDLWKPLNVLVEAAT---RPRKSLGRPKKAAV------ 235
+ Q ++ +D+ P+D K LWKPLN LV+ A P+ LG V
Sbjct: 186 ANPNQSLSNRRNKDVDEPWDSKLHLWKPLNFLVDVANGTKDPKSELGNASHNDVQGSKTK 245
Query: 236 ------------------------SAGLNVSAQAVVDTNQRF-DGRF------------- 257
+A L + + + F D R
Sbjct: 246 TKDHKRKCKLEEEISNNGDPTTSETATLKRTRRTRRKRSSTFGDSRIPLLPGAASLKQER 305
Query: 258 --GPIWFSLVASDEQEGDEPLPQISSCYLRVKDGRLPVSFIKRYIVKKLNLISEAEVEIS 315
G +WFSLVAS QEG+ LPQI + YLR++DG +PVSFI++Y+++KL+L SE EVEI+
Sbjct: 306 RNGHVWFSLVASSNQEGEASLPQIPANYLRIRDGNIPVSFIQKYLMRKLDLKSEDEVEIT 365
Query: 316 LRGQPVLSTLELHNLINWWVQTSSASERIQTVVGSSAKDFVMVLSYGRK 364
G+PV+ TL+LH+L++ W++T+S +R+ +GSSAK+FVMVL Y RK
Sbjct: 366 CMGEPVIPTLQLHSLVDLWLETTSKHQRVAASIGSSAKEFVMVLVYSRK 414
>sp|Q9M9Y4|DRIP1_ARATH E3 ubiquitin protein ligase DRIP1 OS=Arabidopsis thaliana GN=DRIP1
PE=1 SV=2
Length = 421
Score = 246 bits (627), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 156/416 (37%), Positives = 227/416 (54%), Gaps = 62/416 (14%)
Query: 8 LKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGC 67
+KV +E + AC++C +C + RDATTISECLH+FCRKCIYEKITE+EI++CPVCN DLG
Sbjct: 3 IKVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVCNIDLGS 62
Query: 68 APLEKLRADHNLQDLRIKIF---------------PSKRRNLDAPDSVSSVPLPA----- 107
PLEKLR DHNLQDLR KIF P KR+ V S P+ +
Sbjct: 63 TPLEKLRPDHNLQDLRAKIFALKRRKVKAPGIVSLPGKRKERSISSLVVSTPMVSAQAGT 122
Query: 108 --------RRKEISLSSLA-----------------ISTPKSPVKSSSSGRRSKPVPKKT 142
RKE+ SLA S+P + K + + R+SK K++
Sbjct: 123 TRRRTKAPTRKELRNGSLAERTVKKEESSGDELLESTSSPDTLNKFTQNKRQSKKSCKES 182
Query: 143 LVQEEYTSPIEEPIKDVEDPPELS--------SEPL----CRNTQTKRQILSAAESSIQH 190
+ +E +EP D L+ ++PL + + +K + + + + Q
Sbjct: 183 ISNKENKDG-DEPWDSKMDWKPLNFLVEVANGTKPLKSSASQGSGSKSEHANVSRNQFQG 241
Query: 191 TPDKGTEDIARPF--DGKSDLWKPLNVLVEAATRPRKSLGRPKKAAVSAGLNVSAQAVVD 248
+ K + D KS+ P E T R + K++A + G + + +
Sbjct: 242 SKTKTKNKKRKCKREDDKSNNGDP--TTSETVTPKRMRTTQRKRSATTLGDSRNLPQPDE 299
Query: 249 TNQRFDGRFGPIWFSLVASDEQEGDEPLPQISSCYLRVKDGRLPVSFIKRYIVKKLNLIS 308
++ + + R GP+WFSLVAS++QEG LPQI + +LR++DG VSFI++Y+++KL+L S
Sbjct: 300 SSAKQERRNGPVWFSLVASNDQEGGTSLPQIPANFLRIRDGNTTVSFIQKYLMRKLDLES 359
Query: 309 EAEVEISLRGQPVLSTLELHNLINWWVQTSSASERIQTVVGSSAKDFVMVLSYGRK 364
E E+EI G+ V+ TL L+NL++ W+Q SS +R +VGSSAKDF MVL Y RK
Sbjct: 360 ENEIEIKCMGEAVIPTLTLYNLVDLWLQKSSNHQRFAALVGSSAKDFTMVLVYARK 415
>sp|Q9LS86|DRIPH_ARATH Probable E3 ubiquitin protein ligase DRIPH OS=Arabidopsis thaliana
GN=At3g23060 PE=2 SV=1
Length = 480
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 74/107 (69%)
Query: 258 GPIWFSLVASDEQEGDEPLPQISSCYLRVKDGRLPVSFIKRYIVKKLNLISEAEVEISLR 317
P+WFSL S Q + LP I++C +RVKD + VS++K+Y++ KL L SE +VEI LR
Sbjct: 363 NPVWFSLKPSKTQNIEMLLPPITACCIRVKDSNMTVSYLKKYLMVKLGLESEDQVEIWLR 422
Query: 318 GQPVLSTLELHNLINWWVQTSSASERIQTVVGSSAKDFVMVLSYGRK 364
+PV S+L LHNL++WWVQT+ ER +VGSSA +F+M L Y K
Sbjct: 423 DEPVCSSLTLHNLVDWWVQTTPLPERQSAMVGSSAAEFIMDLYYSFK 469
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%)
Query: 9 KVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCA 68
KV +++ C+ CP+C+ F+DATTISECLH+FCR CI K E +++CPVCN +LG
Sbjct: 4 KVLSKEVKPCLACPICTNPFKDATTISECLHTFCRSCIRNKFINERVNACPVCNVNLGVF 63
Query: 69 PLEKLRADHNLQDLRIKIF 87
PLEKLR+D QDL++KI+
Sbjct: 64 PLEKLRSDCTWQDLKLKIY 82
>sp|Q4QR06|PCGF1_XENLA Polycomb group RING finger protein 1 OS=Xenopus laevis GN=pcgf1
PE=2 SV=2
Length = 259
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ +KV ++L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 28 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSK--YCPLCNI 85
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPSKRRNLDA 96
+ PL L+ D +QD+ K+ P + N D+
Sbjct: 86 KIHETQPLLNLKLDRVMQDIVYKLVPGLQENEDS 119
>sp|Q28H21|PCGF1_XENTR Polycomb group RING finger protein 1 OS=Xenopus tropicalis GN=pcgf1
PE=2 SV=1
Length = 259
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ +KV ++L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 28 NEEVVKVKIKELNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSK--YCPLCNI 85
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPSKRRNLDA 96
+ PL L+ D +QD+ K+ P + N D
Sbjct: 86 KIHETQPLLNLKLDRVMQDIVYKLVPGLQENEDG 119
>sp|P35227|PCGF2_HUMAN Polycomb group RING finger protein 2 OS=Homo sapiens GN=PCGF2 PE=1
SV=1
Length = 344
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS-------KRRNLDAPDSVSSVP 104
+ PL +R+D LQD+ K+ P +RR+ A ++ VP
Sbjct: 60 VHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVP 107
>sp|P23798|PCGF2_MOUSE Polycomb group RING finger protein 2 OS=Mus musculus GN=Pcgf2 PE=1
SV=2
Length = 342
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 10/108 (9%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCALCGGYFIDATTIVECLHSFCKTCIVRYL--ETNKYCPMCDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS-------KRRNLDAPDSVSSVP 104
+ PL +R+D LQD+ K+ P +RR+ A ++ VP
Sbjct: 60 VHKTRPLLSIRSDKTLQDIVYKLVPGLFKDEMKRRRDFYAAYPLTEVP 107
>sp|Q5SDR3|BMI1_CHICK Polycomb complex protein BMI-1 OS=Gallus gallus GN=BMI1 PE=2 SV=1
Length = 326
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTRPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|Q7T3E6|BMI1B_DANRE Polycomb complex protein BMI-1-B OS=Danio rerio GN=bmi1b PE=2
SV=1
Length = 324
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIVECLHSFCKMCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTKPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|P25916|BMI1_MOUSE Polycomb complex protein BMI-1 OS=Mus musculus GN=Bmi1 PE=1 SV=1
Length = 324
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTRPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|Q91648|BMI1A_XENLA Polycomb complex protein BMI-1-A OS=Xenopus laevis GN=bmi1a PE=1
SV=1
Length = 326
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL +RAD LQD+ K+ P
Sbjct: 60 VHKTRPLLNIRADKTLQDIVYKLVPG 85
>sp|Q5R8L2|BMI1_PONAB Polycomb complex protein BMI-1 OS=Pongo abelii GN=BMI1 PE=2 SV=1
Length = 326
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTRPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|P35226|BMI1_HUMAN Polycomb complex protein BMI-1 OS=Homo sapiens GN=BMI1 PE=1 SV=2
Length = 326
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTRPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|Q32KX7|BMI1_BOVIN Polycomb complex protein BMI-1 OS=Bos taurus GN=BMI1 PE=2 SV=1
Length = 326
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTRPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|Q9TST0|BMI1_FELCA Polycomb complex protein BMI-1 OS=Felis catus GN=BMI1 PE=2 SV=1
Length = 326
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTRPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|Q8JIR0|BMI1A_DANRE Polycomb complex protein BMI-1-A OS=Danio rerio GN=bmi1a PE=1
SV=2
Length = 320
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DATTI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPSKRRN 93
+ PL +R+D LQD+ K+ P +N
Sbjct: 60 VHKTKPLLNIRSDKTLQDIVYKLVPGLFKN 89
>sp|Q7ZYZ7|PCGF1_DANRE Polycomb group RING finger protein 1 OS=Danio rerio GN=pcgf1 PE=3
SV=1
Length = 261
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ +K+ + L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 28 NEEEVKIKIKDLNEHIVCYLCAGYFIDATTITECLHTFCKSCIVKYLQTSKY--CPMCNI 85
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL L+ D +QD+ K+ P
Sbjct: 86 KIHETQPLLNLKLDRVMQDIVYKLVPG 112
>sp|Q640D5|BMI1B_XENLA Polycomb complex protein BMI-1-B OS=Xenopus laevis GN=bmi1b PE=2
SV=1
Length = 323
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
+T ++ +L + C LC F DA TI ECLHSFC+ CI + E CP+C+
Sbjct: 2 HRTTRIKITELNPHLMCVLCGGYFIDAATIIECLHSFCKTCIVRYL--ETSKYCPICDVQ 59
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL +RAD LQD+ K+ P
Sbjct: 60 VHKTRPLLNIRADKTLQDIVYKLVPG 85
>sp|Q8R023|PCGF1_MOUSE Polycomb group RING finger protein 1 OS=Mus musculus GN=Pcgf1 PE=2
SV=2
Length = 259
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ ++V + L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 30 NEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNI 87
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL L+ D +QD+ K+ P
Sbjct: 88 KIHETQPLLNLKLDRVMQDIVYKLVPG 114
>sp|Q9BSM1|PCGF1_HUMAN Polycomb group RING finger protein 1 OS=Homo sapiens GN=PCGF1 PE=1
SV=2
Length = 259
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ ++V + L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 30 NEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNI 87
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL L+ D +QD+ K+ P
Sbjct: 88 KIHETQPLLNLKLDRVMQDIVYKLVPG 114
>sp|Q6DLV9|PCGF1_RAT Polycomb group RING finger protein 1 (Fragment) OS=Rattus
norvegicus GN=Pcgf1 PE=2 SV=1
Length = 243
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ ++V + L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 18 NEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNI 75
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL L+ D +QD+ K+ P
Sbjct: 76 KIHETQPLLNLKLDRVMQDIVYKLVPG 102
>sp|Q8BTQ0|PCGF3_MOUSE Polycomb group RING finger protein 3 OS=Mus musculus GN=PcgF3
PE=2 SV=1
Length = 241
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 7 TLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG 66
T K+ + A +TC LCS DATT++ECLH+FCR C+ + + EE ++CP C +
Sbjct: 3 TRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIH 60
Query: 67 -CAPLEKLRADHNLQDLRIKIFPS 89
PL+ + D +QD+ K+ P
Sbjct: 61 QSHPLQYIGHDRTMQDIVYKLVPG 84
>sp|Q2KJ29|PCGF3_BOVIN Polycomb group RING finger protein 3 OS=Bos taurus GN=PCGF3 PE=2
SV=1
Length = 242
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 7 TLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG 66
T K+ + A +TC LCS DATT++ECLH+FCR C+ + + EE ++CP C +
Sbjct: 3 TRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIH 60
Query: 67 -CAPLEKLRADHNLQDLRIKIFPS 89
PL+ + D +QD+ K+ P
Sbjct: 61 QSHPLQYIGHDRTMQDIVYKLVPG 84
>sp|Q3KNV8|PCGF3_HUMAN Polycomb group RING finger protein 3 OS=Homo sapiens GN=PCGF3
PE=1 SV=1
Length = 242
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 7 TLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG 66
T K+ + A +TC LCS DATT++ECLH+FCR C+ + + EE ++CP C +
Sbjct: 3 TRKIKLWDINAHITCRLCSGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIH 60
Query: 67 -CAPLEKLRADHNLQDLRIKIFPS 89
PL+ + D +QD+ K+ P
Sbjct: 61 QSHPLQYIGHDRTMQDIVYKLVPG 84
>sp|Q2YDF9|PCGF1_BOVIN Polycomb group RING finger protein 1 OS=Bos taurus GN=PCGF1 PE=2
SV=2
Length = 259
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 4 TEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNT 63
E+ ++V + L + C LC+ F DATTI+ECLH+FC+ CI + + + CP+CN
Sbjct: 30 NEEEVRVKIKDLNEHIVCCLCAGYFVDATTITECLHTFCKSCIVKYLQTSKY--CPMCNI 87
Query: 64 DLG-CAPLEKLRADHNLQDLRIKIFPS 89
+ PL + D +QD+ K+ P
Sbjct: 88 KIHETQPLLNHKLDRVMQDIVYKLVPG 114
>sp|Q07G17|PCGF3_XENTR Polycomb group RING finger protein 3 OS=Xenopus tropicalis
GN=pcgf3 PE=2 SV=1
Length = 242
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 7 TLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG 66
T K+ + A +TC LC+ DATT++ECLH+FCR C+ + + EE ++CP C +
Sbjct: 3 TRKIKLWDINAHITCRLCNGYLIDATTVTECLHTFCRSCLVKYL--EENNTCPTCRIVIH 60
Query: 67 -CAPLEKLRADHNLQDLRIKIFPS 89
PL+ + D +QD+ K+ P
Sbjct: 61 QSHPLQYIGHDRTMQDIVYKLVPG 84
>sp|Q9BYE7|PCGF6_HUMAN Polycomb group RING finger protein 6 OS=Homo sapiens GN=PCGF6 PE=1
SV=2
Length = 350
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 16/119 (13%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
E+ +N +L + C +C DATTI+ECLH+FC+ CI + CP CN
Sbjct: 118 EEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYS--NRCPKCNIV 175
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS-------------KRRNLDAPDSVSSVPLPARR 109
+ PL +R D LQD+ K+ + K R L+ P P+P+ +
Sbjct: 176 VHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAVPQPVPSSK 234
>sp|Q5XI70|PCGF6_RAT Polycomb group RING finger protein 6 OS=Rattus norvegicus GN=Pcgf6
PE=2 SV=1
Length = 351
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 16/117 (13%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
E+ +N +L + C +C DATTI+ECLH+FC+ CI + CP CN
Sbjct: 119 EEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYS--NRCPKCNIV 176
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS-------------KRRNLDAPDSVSSVPLPA 107
+ PL +R D LQD+ K+ + K R L+ P P+PA
Sbjct: 177 VHQTQPLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKERGLEVPKPAVPQPVPA 233
>sp|Q99NA9|PCGF6_MOUSE Polycomb group RING finger protein 6 OS=Mus musculus GN=Pcgf6 PE=1
SV=1
Length = 353
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 5 EQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTD 64
E+ +N +L + C +C DATTI+ECLH+FC+ CI + CP CN
Sbjct: 121 EEERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYS--NRCPKCNIV 178
Query: 65 LG-CAPLEKLRADHNLQDLRIKIFPS-------------KRRNLDAPDSVSSVPLPA 107
+ PL +R D LQD+ K+ + K R L+ P + P+P+
Sbjct: 179 VHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAAPQPVPS 235
>sp|A0JN86|PCGF5_BOVIN Polycomb group RING finger protein 5 OS=Bos taurus GN=PCGF5 PE=2
SV=1
Length = 255
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG-CAPLEKLRADH 77
+TC +C TT++ECLH+FC+ CI + E+ + CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRCGNQVHETNPLEMLRLDN 73
Query: 78 NLQDLRIKIFPSKRRNLD 95
L+++ K+ P R L+
Sbjct: 74 TLEEIIFKLVPGLREQLE 91
>sp|Q86SE9|PCGF5_HUMAN Polycomb group RING finger protein 5 OS=Homo sapiens GN=PCGF5
PE=1 SV=1
Length = 256
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG-CAPLEKLRADH 77
+TC +C TT++ECLH+FC+ CI + E+ + CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRCGNQVHETNPLEMLRLDN 73
Query: 78 NLQDLRIKIFPSKR 91
L+++ K+ P R
Sbjct: 74 TLEEIIFKLVPGLR 87
>sp|Q3UK78|PCGF5_MOUSE Polycomb group RING finger protein 5 OS=Mus musculus GN=Pcgf5
PE=2 SV=1
Length = 256
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG-CAPLEKLRADH 77
+TC +C TT++ECLH+FC+ CI + E+ + CP C + PLE LR D+
Sbjct: 16 ITCYICKGYLIKPTTVTECLHTFCKTCIVQHF--EDSNDCPRCGNQVHETNPLEMLRLDN 73
Query: 78 NLQDLRIKIFPSKR 91
L+++ K+ P R
Sbjct: 74 TLEEIIFKLVPGLR 87
>sp|B3DK16|PCF5A_DANRE Polycomb group RING finger protein 5-A OS=Danio rerio GN=pcgf5a
PE=2 SV=1
Length = 234
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 6/100 (6%)
Query: 1 MATTEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPV 60
MAT + L + + + TC +C T ++ECLH+FC+ CI + EE + CP
Sbjct: 1 MATHRKHLVRDFNRYI---TCSICRGYLIKPTAVTECLHTFCKSCIVQHF--EESNECPE 55
Query: 61 CNTDLG-CAPLEKLRADHNLQDLRIKIFPSKRRNLDAPDS 99
C + PLE LR D L+++ K+ P R + +S
Sbjct: 56 CGIQVHETNPLEMLRLDKTLEEIIFKLVPGLREKEEHQES 95
>sp|Q1JPS1|PCF5B_DANRE Polycomb group RING finger protein 5-B OS=Danio rerio GN=pcgf5b
PE=2 SV=1
Length = 232
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLG-CAPLEKLRADH 77
+TC +C TT++ECLH+FC+ CI + E+ + CP C + PLE LR D+
Sbjct: 16 ITCFVCKGYLIKPTTVTECLHTFCKSCIVQHF--EDSNDCPKCGIQVHETNPLEMLRLDN 73
Query: 78 NLQDLRIKIFPSKR 91
L+++ K+ P R
Sbjct: 74 TLEEVIFKLVPGLR 87
>sp|P35820|PSC_DROME Polycomb group protein Psc OS=Drosophila melanogaster GN=Psc PE=1
SV=2
Length = 1601
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 MATTEQTLKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPV 60
+ATT + V + + C LC +ATTI ECLHSFC C+ + +E CP
Sbjct: 243 LATTSRPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCHSCLINHLRKERF--CPR 300
Query: 61 CNTDLGCAPLEKLRADHNLQDLRIKIFP 88
C + A +++D LQ + K+ P
Sbjct: 301 CEMVINNA-KPNIKSDTTLQAIVYKLVP 327
>sp|Q6MGB6|RING1_RAT E3 ubiquitin-protein ligase RING1 OS=Rattus norvegicus GN=Ring1
PE=2 SV=2
Length = 406
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 8 LKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGC 67
+ V+ L + + CP+C + ++ T ECLH FC CI + + CP C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 91
Query: 68 APLEKLRADHNLQDLRIKIFPSK 90
LR D N L KI+PS+
Sbjct: 92 VSKRSLRPDPNFDALISKIYPSR 114
>sp|O35730|RING1_MOUSE E3 ubiquitin-protein ligase RING1 OS=Mus musculus GN=Ring1 PE=1
SV=2
Length = 406
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 8 LKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGC 67
+ V+ L + + CP+C + ++ T ECLH FC CI + + CP C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 91
Query: 68 APLEKLRADHNLQDLRIKIFPSK 90
LR D N L KI+PS+
Sbjct: 92 VSKRSLRPDPNFDALISKIYPSR 114
>sp|Q5TJF3|RING1_CANFA E3 ubiquitin-protein ligase RING1 OS=Canis familiaris GN=RING1 PE=3
SV=2
Length = 406
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 8 LKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGC 67
+ V+ L + + CP+C + ++ T ECLH FC CI + + CP C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 91
Query: 68 APLEKLRADHNLQDLRIKIFPSK 90
LR D N L KI+PS+
Sbjct: 92 VSKRSLRPDPNFDALISKIYPSR 114
>sp|Q06587|RING1_HUMAN E3 ubiquitin-protein ligase RING1 OS=Homo sapiens GN=RING1 PE=1
SV=2
Length = 406
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 8 LKVNREKLVACMTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGC 67
+ V+ L + + CP+C + ++ T ECLH FC CI + + CP C L
Sbjct: 35 IAVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL-- 91
Query: 68 APLEKLRADHNLQDLRIKIFPSK 90
LR D N L KI+PS+
Sbjct: 92 VSKRSLRPDPNFDALISKIYPSR 114
>sp|Q7ZWM8|RNG2B_XENLA E3 ubiquitin-protein ligase RING2-B OS=Xenopus laevis GN=rnf2-b
PE=2 SV=2
Length = 343
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 45 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 101
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 102 FDALISKIYPSR 113
>sp|A2T6X5|RING1_PANTR E3 ubiquitin-protein ligase RING1 OS=Pan troglodytes GN=RING1
PE=3 SV=1
Length = 377
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 73
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 74 FDALISKIYPSR 85
>sp|A1YFY1|RING1_PANPA E3 ubiquitin-protein ligase RING1 OS=Pan paniscus GN=RING1 PE=3
SV=1
Length = 377
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 73
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 74 FDALISKIYPSR 85
>sp|Q8WMN5|RING1_MACMU E3 ubiquitin-protein ligase RING1 OS=Macaca mulatta GN=RING1 PE=3
SV=1
Length = 377
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 73
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 74 FDALISKIYPSR 85
>sp|A1YER5|RING1_GORGO E3 ubiquitin-protein ligase RING1 OS=Gorilla gorilla gorilla
GN=RING1 PE=3 SV=1
Length = 377
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 17 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 73
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 74 FDALISKIYPSR 85
>sp|Q66J69|RNG2A_XENLA E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis GN=rnf2-a
PE=2 SV=1
Length = 344
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 46 LMCPICLDMLKNTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRPDPN 102
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 103 FDALISKIYPSR 114
>sp|Q9VB08|RING1_DROME E3 ubiquitin-protein ligase RING1 OS=Drosophila melanogaster GN=Sce
PE=1 SV=1
Length = 435
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + + T ECLH FC CI + + CP C L LRAD N
Sbjct: 44 LMCPICLDMLKKTMTTKECLHRFCSDCIVTALRSGNKE-CPTCRKKL--VSKRSLRADPN 100
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 101 FDLLISKIYPSR 112
>sp|Q803I4|RING2_DANRE E3 ubiquitin-protein ligase RING2 OS=Danio rerio GN=rnf2 PE=2 SV=1
Length = 336
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKE-CPTCRKKL--VSKRSLRPDPN 105
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 106 FDALISKIYPSR 117
>sp|Q5R9J5|RING2_PONAB E3 ubiquitin-protein ligase RING2 OS=Pongo abelii GN=RNF2 PE=2 SV=1
Length = 336
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKE-CPTCRKKL--VSKRSLRPDPN 105
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 106 FDALISKIYPSR 117
>sp|Q9CQJ4|RING2_MOUSE E3 ubiquitin-protein ligase RING2 OS=Mus musculus GN=Rnf2 PE=1 SV=1
Length = 336
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKE-CPTCRKKL--VSKRSLRPDPN 105
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 106 FDALISKIYPSR 117
>sp|Q99496|RING2_HUMAN E3 ubiquitin-protein ligase RING2 OS=Homo sapiens GN=RNF2 PE=1 SV=1
Length = 336
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 19 MTCPLCSKLFRDATTISECLHSFCRKCIYEKITEEEIDSCPVCNTDLGCAPLEKLRADHN 78
+ CP+C + ++ T ECLH FC CI + + CP C L LR D N
Sbjct: 49 LMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKE-CPTCRKKL--VSKRSLRPDPN 105
Query: 79 LQDLRIKIFPSK 90
L KI+PS+
Sbjct: 106 FDALISKIYPSR 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,293,255
Number of Sequences: 539616
Number of extensions: 5358237
Number of successful extensions: 19261
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 433
Number of HSP's that attempted gapping in prelim test: 18864
Number of HSP's gapped (non-prelim): 735
length of query: 368
length of database: 191,569,459
effective HSP length: 119
effective length of query: 249
effective length of database: 127,355,155
effective search space: 31711433595
effective search space used: 31711433595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)