Query 017660
Match_columns 368
No_of_seqs 132 out of 1603
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 18:01:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017660.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017660hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 9.6E-29 3.3E-33 237.9 31.8 290 18-323 134-425 (425)
2 1s3e_A Amine oxidase [flavin-c 99.9 3.7E-26 1.3E-30 225.7 25.7 309 16-340 142-469 (520)
3 3nrn_A Uncharacterized protein 99.9 7.9E-25 2.7E-29 210.5 32.8 285 18-332 126-410 (421)
4 2yg5_A Putrescine oxidase; oxi 99.9 4.2E-25 1.4E-29 214.3 18.7 294 15-326 141-452 (453)
5 3nks_A Protoporphyrinogen oxid 99.9 5.5E-25 1.9E-29 214.8 19.5 295 16-324 140-473 (477)
6 2vvm_A Monoamine oxidase N; FA 99.9 2.1E-24 7.2E-29 211.8 21.4 293 14-326 180-486 (495)
7 2ivd_A PPO, PPOX, protoporphyr 99.9 5.2E-24 1.8E-28 208.0 20.8 293 16-327 145-475 (478)
8 4dgk_A Phytoene dehydrogenase; 99.9 4.2E-23 1.4E-27 202.7 24.5 291 20-327 164-493 (501)
9 3i6d_A Protoporphyrinogen oxid 99.9 9.9E-24 3.4E-28 205.2 17.2 291 16-325 146-468 (470)
10 3lov_A Protoporphyrinogen oxid 99.9 2E-23 7E-28 203.7 16.6 291 16-327 144-467 (475)
11 1sez_A Protoporphyrinogen oxid 99.9 6.2E-23 2.1E-27 201.7 15.6 295 17-327 147-495 (504)
12 1b37_A Protein (polyamine oxid 99.9 1.5E-22 5.1E-27 197.5 14.5 298 17-327 135-460 (472)
13 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 4.4E-20 1.5E-24 172.5 21.0 228 79-324 106-341 (342)
14 4gde_A UDP-galactopyranose mut 99.8 2.2E-20 7.5E-25 183.7 14.1 296 16-324 139-478 (513)
15 3k7m_X 6-hydroxy-L-nicotine ox 99.8 1.8E-18 6E-23 166.5 26.8 276 15-325 137-426 (431)
16 4dsg_A UDP-galactopyranose mut 99.8 2.1E-20 7E-25 182.7 13.1 293 17-322 134-452 (484)
17 2iid_A L-amino-acid oxidase; f 99.8 1.1E-18 3.8E-23 171.1 23.1 288 15-327 178-486 (498)
18 2z3y_A Lysine-specific histone 99.8 7.4E-19 2.5E-23 177.9 19.6 226 79-326 395-659 (662)
19 2xag_A Lysine-specific histone 99.8 2.4E-18 8.1E-23 177.0 21.0 227 79-327 566-831 (852)
20 2jae_A L-amino acid oxidase; o 99.8 7.3E-19 2.5E-23 172.0 14.1 233 76-326 230-486 (489)
21 4gut_A Lysine-specific histone 99.7 1.3E-17 4.6E-22 170.3 15.2 228 79-323 528-775 (776)
22 1rsg_A FMS1 protein; FAD bindi 99.7 8.8E-17 3E-21 158.4 17.6 289 17-326 136-508 (516)
23 3ayj_A Pro-enzyme of L-phenyla 99.7 4E-17 1.4E-21 163.9 12.6 307 15-335 279-689 (721)
24 2b9w_A Putative aminooxidase; 99.7 1.9E-16 6.6E-21 151.9 12.0 276 16-322 139-423 (424)
25 1yvv_A Amine oxidase, flavin-c 99.5 2.5E-13 8.6E-18 125.8 18.1 219 81-326 106-328 (336)
26 2bcg_G Secretory pathway GDP d 99.4 1.2E-10 4.2E-15 112.5 24.1 121 17-143 173-299 (453)
27 1d5t_A Guanine nucleotide diss 99.3 3.7E-10 1.3E-14 108.5 22.5 125 16-144 164-290 (433)
28 1vg0_A RAB proteins geranylger 99.2 5.9E-09 2E-13 103.6 28.3 153 11-183 306-461 (650)
29 3p1w_A Rabgdi protein; GDI RAB 99.2 5.5E-11 1.9E-15 114.6 12.0 124 17-143 187-313 (475)
30 1v0j_A UDP-galactopyranose mut 99.2 3.8E-12 1.3E-16 121.1 0.3 135 17-181 136-273 (399)
31 1i8t_A UDP-galactopyranose mut 99.1 4.2E-11 1.5E-15 112.5 7.0 133 17-182 126-260 (367)
32 2bi7_A UDP-galactopyranose mut 99.1 4.8E-11 1.6E-15 112.9 6.4 128 17-179 130-260 (384)
33 2e1m_C L-glutamate oxidase; L- 98.8 1.1E-09 3.7E-14 92.1 1.7 96 228-327 49-154 (181)
34 3hdq_A UDP-galactopyranose mut 98.8 1.1E-08 3.9E-13 96.5 7.8 134 15-182 152-288 (397)
35 3dme_A Conserved exported prot 98.3 2.4E-05 8.1E-10 72.5 16.1 57 86-144 150-209 (369)
36 3dje_A Fructosyl amine: oxygen 98.3 1.4E-05 4.6E-10 76.5 14.5 58 86-145 161-222 (438)
37 1y56_B Sarcosine oxidase; dehy 98.2 0.00012 4.2E-09 68.2 20.1 205 86-325 149-356 (382)
38 1ryi_A Glycine oxidase; flavop 98.2 3.9E-05 1.3E-09 71.6 16.5 197 86-324 164-362 (382)
39 3nyc_A D-arginine dehydrogenas 98.2 0.00016 5.5E-09 67.2 20.2 56 86-144 154-209 (381)
40 2gag_B Heterotetrameric sarcos 98.1 0.00027 9.2E-09 66.4 19.0 200 87-325 175-376 (405)
41 3axb_A Putative oxidoreductase 98.0 0.00016 5.6E-09 69.1 16.5 62 86-150 181-259 (448)
42 3pvc_A TRNA 5-methylaminomethy 97.9 0.00019 6.6E-09 72.7 15.9 56 86-144 412-469 (689)
43 3ps9_A TRNA 5-methylaminomethy 97.9 0.00023 7.7E-09 72.0 15.9 56 86-144 417-473 (676)
44 3da1_A Glycerol-3-phosphate de 97.9 0.00072 2.5E-08 66.7 18.9 57 86-144 170-232 (561)
45 2gf3_A MSOX, monomeric sarcosi 97.8 0.00099 3.4E-08 62.1 18.4 201 86-325 150-365 (389)
46 2rgh_A Alpha-glycerophosphate 97.8 0.002 7E-08 63.6 20.2 57 86-144 188-250 (571)
47 3cgv_A Geranylgeranyl reductas 97.7 0.0034 1.2E-07 58.5 19.3 56 87-144 103-162 (397)
48 2oln_A NIKD protein; flavoprot 97.7 0.004 1.4E-07 58.2 19.7 55 87-144 154-208 (397)
49 2e1m_B L-glutamate oxidase; L- 97.5 6.5E-05 2.2E-09 58.8 3.9 107 129-254 4-112 (130)
50 3atr_A Conserved archaeal prot 97.5 0.011 3.9E-07 56.4 20.4 57 87-145 101-163 (453)
51 3oz2_A Digeranylgeranylglycero 97.5 0.014 4.7E-07 54.1 20.5 57 87-145 103-163 (397)
52 2qcu_A Aerobic glycerol-3-phos 97.4 0.013 4.6E-07 56.7 20.4 57 86-145 149-211 (501)
53 2e1m_A L-glutamate oxidase; L- 97.3 0.00075 2.6E-08 63.0 9.3 112 15-140 257-369 (376)
54 3nix_A Flavoprotein/dehydrogen 97.3 0.023 7.9E-07 53.4 19.4 57 87-144 107-166 (421)
55 3kkj_A Amine oxidase, flavin-c 97.3 0.00062 2.1E-08 59.3 7.8 87 232-327 243-329 (336)
56 3ihg_A RDME; flavoenzyme, anth 97.0 0.038 1.3E-06 53.9 18.5 63 86-149 120-189 (535)
57 3e1t_A Halogenase; flavoprotei 96.9 0.037 1.3E-06 53.7 17.3 56 87-144 112-172 (512)
58 3rp8_A Flavoprotein monooxygen 96.7 0.059 2E-06 50.4 16.6 58 87-149 128-187 (407)
59 2i0z_A NAD(FAD)-utilizing dehy 96.7 0.0042 1.4E-07 59.3 8.4 64 79-144 127-191 (447)
60 1pj5_A N,N-dimethylglycine oxi 96.6 0.0047 1.6E-07 63.8 8.3 56 87-144 152-207 (830)
61 3nlc_A Uncharacterized protein 96.5 0.005 1.7E-07 60.4 7.7 57 86-144 220-277 (549)
62 3g3e_A D-amino-acid oxidase; F 96.5 0.017 5.7E-07 53.0 10.9 189 86-327 142-336 (351)
63 3fg2_P Putative rubredoxin red 96.5 0.0065 2.2E-07 57.1 8.3 58 85-144 183-241 (404)
64 3lxd_A FAD-dependent pyridine 96.5 0.0063 2.1E-07 57.4 8.2 58 85-144 193-251 (415)
65 3i3l_A Alkylhalidase CMLS; fla 96.4 0.04 1.4E-06 54.5 13.9 56 87-144 129-188 (591)
66 2uzz_A N-methyl-L-tryptophan o 96.3 0.0068 2.3E-07 56.0 7.1 55 87-144 150-204 (372)
67 4at0_A 3-ketosteroid-delta4-5a 96.3 0.0065 2.2E-07 59.1 7.1 57 87-144 203-264 (510)
68 1k0i_A P-hydroxybenzoate hydro 96.2 0.22 7.5E-06 46.1 17.1 56 87-144 104-163 (394)
69 1y0p_A Fumarate reductase flav 96.1 0.013 4.5E-07 57.8 8.4 58 86-144 255-317 (571)
70 3v76_A Flavoprotein; structura 96.1 0.014 4.9E-07 55.1 8.3 62 79-144 126-187 (417)
71 2cdu_A NADPH oxidase; flavoenz 96.0 0.012 4.1E-07 56.2 7.4 59 84-144 189-247 (452)
72 1qo8_A Flavocytochrome C3 fuma 95.9 0.015 5.1E-07 57.3 7.5 58 86-144 250-312 (566)
73 1d4d_A Flavocytochrome C fumar 95.8 0.02 6.7E-07 56.5 8.2 58 86-144 255-317 (572)
74 3iwa_A FAD-dependent pyridine 95.6 0.034 1.2E-06 53.3 8.5 59 84-144 200-258 (472)
75 2cul_A Glucose-inhibited divis 95.5 0.029 9.9E-07 48.3 7.0 54 87-143 69-124 (232)
76 3fmw_A Oxygenase; mithramycin, 95.4 0.24 8.1E-06 48.8 14.1 60 87-149 149-213 (570)
77 3oc4_A Oxidoreductase, pyridin 95.4 0.026 8.8E-07 53.9 7.0 58 84-144 187-244 (452)
78 2gqf_A Hypothetical protein HI 95.3 0.035 1.2E-06 52.1 7.5 57 85-144 108-168 (401)
79 1q1r_A Putidaredoxin reductase 95.3 0.04 1.4E-06 52.2 7.9 57 85-143 190-249 (431)
80 3c4n_A Uncharacterized protein 95.2 0.012 4.2E-07 55.3 3.9 56 86-144 172-236 (405)
81 2gmh_A Electron transfer flavo 95.2 0.046 1.6E-06 54.1 8.1 58 87-145 145-218 (584)
82 1c0p_A D-amino acid oxidase; a 95.2 0.53 1.8E-05 43.0 14.9 45 86-145 142-186 (363)
83 2ywl_A Thioredoxin reductase r 95.0 0.044 1.5E-06 44.9 6.3 54 86-143 56-109 (180)
84 1mo9_A ORF3; nucleotide bindin 94.9 0.066 2.3E-06 52.1 8.3 58 85-143 254-315 (523)
85 1trb_A Thioredoxin reductase; 94.9 0.056 1.9E-06 48.5 7.3 56 86-143 184-246 (320)
86 2dkh_A 3-hydroxybenzoate hydro 94.8 3.3 0.00011 41.1 20.8 63 87-150 142-218 (639)
87 1xdi_A RV3303C-LPDA; reductase 94.8 0.05 1.7E-06 52.6 7.2 57 85-144 222-279 (499)
88 3ef6_A Toluene 1,2-dioxygenase 94.8 0.038 1.3E-06 51.9 6.1 56 86-144 185-241 (410)
89 2e4g_A Tryptophan halogenase; 94.8 0.06 2.1E-06 52.7 7.7 56 87-144 195-252 (550)
90 2wdq_A Succinate dehydrogenase 94.8 0.055 1.9E-06 53.5 7.4 58 86-144 143-206 (588)
91 2v3a_A Rubredoxin reductase; a 94.7 0.057 2E-06 50.2 7.2 56 86-144 187-243 (384)
92 2bs2_A Quinol-fumarate reducta 94.7 0.064 2.2E-06 53.8 7.7 57 86-144 158-220 (660)
93 2h88_A Succinate dehydrogenase 94.7 0.053 1.8E-06 54.0 7.1 57 86-144 155-217 (621)
94 1zk7_A HGII, reductase, mercur 94.7 0.078 2.7E-06 50.7 8.1 56 86-144 216-271 (467)
95 2weu_A Tryptophan 5-halogenase 94.7 0.073 2.5E-06 51.5 7.9 56 87-144 174-230 (511)
96 3o0h_A Glutathione reductase; 94.7 0.056 1.9E-06 52.0 7.1 56 85-143 231-287 (484)
97 1m6i_A Programmed cell death p 94.5 0.067 2.3E-06 51.6 7.3 55 86-143 226-281 (493)
98 4dna_A Probable glutathione re 94.5 0.06 2.1E-06 51.4 6.8 57 85-144 210-268 (463)
99 1rp0_A ARA6, thiazole biosynth 94.4 0.079 2.7E-06 47.0 7.0 55 87-143 120-190 (284)
100 2bc0_A NADH oxidase; flavoprot 94.4 0.054 1.9E-06 52.2 6.4 56 85-143 235-290 (490)
101 4a9w_A Monooxygenase; baeyer-v 94.4 0.065 2.2E-06 48.6 6.6 57 86-144 76-132 (357)
102 2wpf_A Trypanothione reductase 94.4 0.072 2.5E-06 51.4 7.2 57 85-143 234-291 (495)
103 2hqm_A GR, grase, glutathione 94.3 0.08 2.7E-06 50.9 7.3 58 85-143 225-284 (479)
104 1fec_A Trypanothione reductase 94.3 0.07 2.4E-06 51.5 6.8 57 85-143 230-287 (490)
105 1n4w_A CHOD, cholesterol oxida 94.3 0.066 2.3E-06 51.9 6.6 63 88-150 223-294 (504)
106 3cgb_A Pyridine nucleotide-dis 94.2 0.12 4.2E-06 49.5 8.3 57 85-144 226-282 (480)
107 2x3n_A Probable FAD-dependent 94.2 0.059 2E-06 50.2 5.8 61 87-149 108-172 (399)
108 2yqu_A 2-oxoglutarate dehydrog 94.1 0.1 3.5E-06 49.7 7.4 57 85-144 207-264 (455)
109 2aqj_A Tryptophan halogenase, 93.9 0.12 4.1E-06 50.4 7.7 57 86-144 165-222 (538)
110 1ges_A Glutathione reductase; 93.8 0.11 3.9E-06 49.3 7.2 57 85-143 207-264 (450)
111 2e5v_A L-aspartate oxidase; ar 93.7 0.11 3.7E-06 49.9 6.9 56 86-144 119-176 (472)
112 1coy_A Cholesterol oxidase; ox 93.7 0.096 3.3E-06 50.8 6.6 61 88-149 228-298 (507)
113 1nhp_A NADH peroxidase; oxidor 93.4 0.1 3.5E-06 49.6 6.1 57 85-144 190-246 (447)
114 1kf6_A Fumarate reductase flav 93.4 0.13 4.5E-06 50.9 7.0 57 86-144 134-197 (602)
115 3ab1_A Ferredoxin--NADP reduct 93.4 0.13 4.6E-06 47.0 6.6 55 87-143 203-262 (360)
116 1onf_A GR, grase, glutathione 93.3 0.16 5.6E-06 48.9 7.4 57 85-143 216-274 (500)
117 3itj_A Thioredoxin reductase 1 93.3 0.15 5E-06 45.9 6.7 53 89-143 211-270 (338)
118 3lad_A Dihydrolipoamide dehydr 93.2 0.2 6.8E-06 47.9 7.8 56 85-143 220-279 (476)
119 2zxi_A TRNA uridine 5-carboxym 93.2 0.15 5.2E-06 50.5 6.9 54 87-143 124-179 (637)
120 2r9z_A Glutathione amide reduc 93.1 0.2 6.7E-06 47.9 7.5 56 85-143 206-263 (463)
121 3ntd_A FAD-dependent pyridine 93.0 0.18 6.2E-06 49.3 7.4 58 85-143 191-266 (565)
122 2pyx_A Tryptophan halogenase; 93.0 0.23 7.7E-06 48.3 7.9 56 87-144 176-233 (526)
123 3nlc_A Uncharacterized protein 93.0 0.34 1.2E-05 47.3 9.1 79 239-326 463-543 (549)
124 3d1c_A Flavin-containing putat 92.9 0.18 6.1E-06 46.1 6.7 55 87-144 89-143 (369)
125 3cty_A Thioredoxin reductase; 92.9 0.23 7.8E-06 44.5 7.3 52 90-143 194-251 (319)
126 2eq6_A Pyruvate dehydrogenase 92.8 0.28 9.7E-06 46.7 8.2 56 85-143 209-270 (464)
127 3ces_A MNMG, tRNA uridine 5-ca 92.7 0.17 5.8E-06 50.3 6.6 55 87-144 125-181 (651)
128 2qae_A Lipoamide, dihydrolipoy 92.7 0.28 9.6E-06 46.8 8.0 57 85-144 214-276 (468)
129 3lzw_A Ferredoxin--NADP reduct 92.7 0.19 6.4E-06 45.1 6.4 55 86-142 67-121 (332)
130 2gqw_A Ferredoxin reductase; f 92.5 0.26 8.7E-06 46.2 7.3 52 85-143 186-238 (408)
131 1chu_A Protein (L-aspartate ox 92.4 0.13 4.5E-06 50.2 5.4 58 86-144 138-208 (540)
132 2a8x_A Dihydrolipoyl dehydroge 92.4 0.34 1.2E-05 46.1 8.1 56 85-143 211-270 (464)
133 1zmd_A Dihydrolipoyl dehydroge 92.3 0.29 9.9E-06 46.7 7.6 57 85-143 219-281 (474)
134 3r9u_A Thioredoxin reductase; 92.2 0.24 8.4E-06 43.9 6.6 48 94-143 191-243 (315)
135 1ebd_A E3BD, dihydrolipoamide 92.2 0.3 1E-05 46.4 7.5 56 85-143 210-269 (455)
136 1ojt_A Surface protein; redox- 92.2 0.21 7.2E-06 47.9 6.4 57 85-144 225-286 (482)
137 3dgh_A TRXR-1, thioredoxin red 92.1 0.29 9.9E-06 46.9 7.3 57 85-143 226-288 (483)
138 3alj_A 2-methyl-3-hydroxypyrid 91.9 0.3 1E-05 45.0 7.0 57 87-149 108-166 (379)
139 2zbw_A Thioredoxin reductase; 91.8 0.44 1.5E-05 42.8 7.9 54 87-143 192-251 (335)
140 3dk9_A Grase, GR, glutathione 91.8 0.5 1.7E-05 45.1 8.6 57 85-143 227-292 (478)
141 2bry_A NEDD9 interacting prote 91.8 0.15 5.2E-06 49.2 4.9 58 87-144 167-230 (497)
142 1jnr_A Adenylylsulfate reducta 91.7 0.32 1.1E-05 48.6 7.3 56 87-144 152-218 (643)
143 1v59_A Dihydrolipoamide dehydr 91.7 0.38 1.3E-05 46.0 7.6 56 85-143 223-286 (478)
144 3urh_A Dihydrolipoyl dehydroge 91.6 0.45 1.5E-05 45.6 8.1 56 85-143 238-299 (491)
145 3ics_A Coenzyme A-disulfide re 91.6 0.28 9.4E-06 48.4 6.7 54 85-143 227-281 (588)
146 3gwf_A Cyclohexanone monooxyge 91.3 0.31 1.1E-05 47.5 6.6 56 87-143 88-146 (540)
147 4ap3_A Steroid monooxygenase; 91.2 0.33 1.1E-05 47.4 6.7 56 87-143 100-158 (549)
148 2qa2_A CABE, polyketide oxygen 91.2 0.43 1.5E-05 46.0 7.4 61 87-150 108-173 (499)
149 2qa1_A PGAE, polyketide oxygen 91.1 0.46 1.6E-05 45.8 7.6 61 87-150 107-172 (500)
150 1dxl_A Dihydrolipoamide dehydr 91.0 0.42 1.4E-05 45.5 7.1 57 85-144 217-279 (470)
151 4g6h_A Rotenone-insensitive NA 90.8 0.34 1.2E-05 46.8 6.2 57 83-142 269-330 (502)
152 1fl2_A Alkyl hydroperoxide red 90.8 0.36 1.2E-05 42.9 6.0 57 87-143 57-114 (310)
153 2zbw_A Thioredoxin reductase; 90.6 0.47 1.6E-05 42.6 6.7 55 86-143 65-120 (335)
154 3gyx_A Adenylylsulfate reducta 90.4 0.38 1.3E-05 48.2 6.3 56 86-143 166-232 (662)
155 3ab1_A Ferredoxin--NADP reduct 90.4 0.49 1.7E-05 43.1 6.7 56 86-143 74-130 (360)
156 1vdc_A NTR, NADPH dependent th 90.2 0.42 1.4E-05 42.9 6.0 53 87-143 71-123 (333)
157 3k30_A Histamine dehydrogenase 90.1 0.21 7.2E-06 50.3 4.2 56 87-144 568-624 (690)
158 3cp8_A TRNA uridine 5-carboxym 90.0 0.44 1.5E-05 47.3 6.3 54 87-143 118-173 (641)
159 3h8l_A NADH oxidase; membrane 90.0 0.38 1.3E-05 44.8 5.7 52 86-143 218-269 (409)
160 2xve_A Flavin-containing monoo 89.9 0.48 1.7E-05 45.2 6.4 57 86-143 101-165 (464)
161 1fl2_A Alkyl hydroperoxide red 89.8 0.56 1.9E-05 41.6 6.4 51 90-142 183-240 (310)
162 1kdg_A CDH, cellobiose dehydro 89.7 0.55 1.9E-05 45.8 6.8 59 91-151 200-268 (546)
163 4b1b_A TRXR, thioredoxin reduc 89.5 0.66 2.2E-05 45.2 7.1 57 84-143 261-318 (542)
164 3dgz_A Thioredoxin reductase 2 89.5 0.9 3.1E-05 43.5 8.0 57 85-143 224-286 (488)
165 3klj_A NAD(FAD)-dependent dehy 89.5 0.26 9E-06 45.8 4.1 50 88-142 64-114 (385)
166 3uox_A Otemo; baeyer-villiger 89.3 0.52 1.8E-05 46.0 6.2 56 87-143 88-146 (545)
167 1y56_A Hypothetical protein PH 89.0 0.43 1.5E-05 45.9 5.3 48 94-144 265-313 (493)
168 2jbv_A Choline oxidase; alcoho 88.9 0.36 1.2E-05 47.2 4.8 52 98-150 221-279 (546)
169 3s5w_A L-ornithine 5-monooxyge 88.6 1.4 4.6E-05 41.7 8.5 55 86-143 310-376 (463)
170 3kd9_A Coenzyme A disulfide re 88.5 0.67 2.3E-05 43.8 6.2 56 84-143 188-243 (449)
171 2gv8_A Monooxygenase; FMO, FAD 88.4 0.76 2.6E-05 43.4 6.6 55 87-144 116-177 (447)
172 3ic9_A Dihydrolipoamide dehydr 88.4 1.1 3.9E-05 42.9 7.9 55 85-143 214-273 (492)
173 2q0l_A TRXR, thioredoxin reduc 88.4 0.83 2.8E-05 40.5 6.5 54 86-143 59-113 (311)
174 2q0l_A TRXR, thioredoxin reduc 88.3 1.1 3.9E-05 39.5 7.3 51 90-142 182-239 (311)
175 2vou_A 2,6-dihydroxypyridine h 88.2 0.83 2.8E-05 42.3 6.6 58 88-150 101-160 (397)
176 3jsk_A Cypbp37 protein; octame 88.1 1.2 4.2E-05 40.6 7.4 57 87-143 161-250 (344)
177 3f8d_A Thioredoxin reductase ( 88.0 0.72 2.5E-05 40.9 5.9 54 86-143 70-124 (323)
178 3h28_A Sulfide-quinone reducta 87.7 0.3 1E-05 46.0 3.2 51 87-142 201-254 (430)
179 3lzw_A Ferredoxin--NADP reduct 87.3 0.79 2.7E-05 40.9 5.7 50 90-142 193-248 (332)
180 1hyu_A AHPF, alkyl hydroperoxi 87.3 0.76 2.6E-05 44.5 5.9 57 87-143 268-325 (521)
181 3itj_A Thioredoxin reductase 1 87.2 0.99 3.4E-05 40.3 6.3 53 87-143 85-141 (338)
182 1vdc_A NTR, NADPH dependent th 87.0 1.2 4.2E-05 39.8 6.8 54 90-143 198-258 (333)
183 1w4x_A Phenylacetone monooxyge 86.9 1 3.5E-05 43.8 6.6 55 88-143 96-153 (542)
184 1lvl_A Dihydrolipoamide dehydr 86.8 0.81 2.8E-05 43.5 5.7 54 85-143 211-267 (458)
185 3qvp_A Glucose oxidase; oxidor 86.5 0.68 2.3E-05 45.5 5.1 55 97-151 238-300 (583)
186 2gjc_A Thiazole biosynthetic e 86.5 1.9 6.4E-05 39.0 7.6 40 87-126 147-191 (326)
187 3f8d_A Thioredoxin reductase ( 86.3 1.4 4.6E-05 39.0 6.7 50 92-144 195-251 (323)
188 3s5w_A L-ornithine 5-monooxyge 86.3 0.92 3.1E-05 42.9 5.8 56 87-142 128-190 (463)
189 3fpz_A Thiazole biosynthetic e 86.3 0.53 1.8E-05 42.4 3.9 42 285-326 280-325 (326)
190 3cty_A Thioredoxin reductase; 85.5 1.4 4.9E-05 39.1 6.4 53 87-143 73-125 (319)
191 2q7v_A Thioredoxin reductase; 85.0 2.1 7.1E-05 38.1 7.3 51 90-143 191-248 (325)
192 3d1c_A Flavin-containing putat 84.8 1.2 4.2E-05 40.4 5.7 54 87-143 215-271 (369)
193 2xdo_A TETX2 protein; tetracyc 84.7 0.72 2.5E-05 42.8 4.1 52 88-144 130-182 (398)
194 3c96_A Flavin-containing monoo 84.7 1.8 6.2E-05 40.2 6.9 59 87-149 108-175 (410)
195 1trb_A Thioredoxin reductase; 84.6 1.8 6.3E-05 38.3 6.7 54 86-143 62-115 (320)
196 4eqs_A Coenzyme A disulfide re 84.5 1.5 5.2E-05 41.3 6.3 52 85-143 187-239 (437)
197 3pl8_A Pyranose 2-oxidase; sub 84.3 1.2 4E-05 44.2 5.7 53 99-151 273-331 (623)
198 3ces_A MNMG, tRNA uridine 5-ca 84.2 2.5 8.6E-05 42.0 7.9 53 287-346 383-435 (651)
199 3hyw_A Sulfide-quinone reducta 83.5 0.69 2.4E-05 43.5 3.5 53 86-143 200-255 (430)
200 1xhc_A NADH oxidase /nitrite r 82.9 1.4 4.9E-05 40.4 5.3 51 85-143 182-233 (367)
201 2zxi_A TRNA uridine 5-carboxym 82.8 3.7 0.00013 40.7 8.4 53 287-346 388-440 (637)
202 3sx6_A Sulfide-quinone reducta 82.4 1.8 6E-05 40.7 5.9 51 88-142 210-267 (437)
203 2q7v_A Thioredoxin reductase; 82.3 2.4 8.1E-05 37.7 6.4 56 86-143 65-122 (325)
204 1xhc_A NADH oxidase /nitrite r 81.6 1.1 3.7E-05 41.2 4.0 47 92-143 66-112 (367)
205 3vrd_B FCCB subunit, flavocyto 81.6 0.43 1.5E-05 44.3 1.2 44 96-142 212-256 (401)
206 1ju2_A HydroxynitrIle lyase; f 81.4 1.5 5.2E-05 42.6 5.1 57 95-151 203-268 (536)
207 1pn0_A Phenol 2-monooxygenase; 80.7 47 0.0016 32.9 18.7 39 288-326 350-390 (665)
208 1hyu_A AHPF, alkyl hydroperoxi 80.2 2.5 8.6E-05 40.8 6.2 51 90-142 394-451 (521)
209 1cjc_A Protein (adrenodoxin re 80.0 2.7 9.2E-05 39.9 6.2 44 99-143 270-332 (460)
210 2a87_A TRXR, TR, thioredoxin r 79.9 2.2 7.7E-05 38.2 5.4 53 86-143 71-125 (335)
211 1ps9_A 2,4-dienoyl-COA reducta 79.6 4.6 0.00016 40.3 8.0 51 88-143 575-627 (671)
212 4hb9_A Similarities with proba 79.4 2.7 9.3E-05 38.5 6.0 46 98-145 121-167 (412)
213 3fbs_A Oxidoreductase; structu 78.1 3.4 0.00012 35.8 6.0 54 86-143 56-111 (297)
214 3q9t_A Choline dehydrogenase a 77.8 2.2 7.5E-05 41.9 4.9 54 97-150 217-276 (577)
215 3qfa_A Thioredoxin reductase 1 77.2 5.8 0.0002 38.2 7.7 58 85-143 249-314 (519)
216 3fim_B ARYL-alcohol oxidase; A 76.8 1.5 5.1E-05 43.0 3.4 56 96-151 218-283 (566)
217 2gag_A Heterotetrameric sarcos 76.8 3.5 0.00012 43.1 6.4 50 93-143 323-382 (965)
218 2r0c_A REBC; flavin adenine di 76.7 4.4 0.00015 39.3 6.8 58 88-150 140-203 (549)
219 4gcm_A TRXR, thioredoxin reduc 76.6 3.8 0.00013 36.2 5.8 53 87-143 63-115 (312)
220 1gpe_A Protein (glucose oxidas 76.6 2.4 8.3E-05 41.6 4.9 55 97-151 242-304 (587)
221 2cul_A Glucose-inhibited divis 75.8 2.6 9E-05 35.7 4.4 37 286-326 196-232 (232)
222 2a87_A TRXR, TR, thioredoxin r 75.6 2 6.7E-05 38.6 3.7 45 96-143 201-251 (335)
223 3fbs_A Oxidoreductase; structu 75.4 3.3 0.00011 36.0 5.0 40 284-326 253-292 (297)
224 3t37_A Probable dehydrogenase; 75.1 3.1 0.00011 40.0 5.1 52 98-151 223-278 (526)
225 1q1r_A Putidaredoxin reductase 74.9 3.4 0.00011 38.7 5.2 46 93-143 67-113 (431)
226 3r9u_A Thioredoxin reductase; 73.9 5.1 0.00017 35.1 5.9 54 86-142 62-116 (315)
227 4fk1_A Putative thioredoxin re 73.8 5.3 0.00018 35.1 6.0 55 87-143 61-116 (304)
228 3ef6_A Toluene 1,2-dioxygenase 73.2 3.7 0.00013 38.1 5.0 45 94-143 65-110 (410)
229 3hyw_A Sulfide-quinone reducta 72.7 1 3.6E-05 42.3 1.1 46 92-143 62-108 (430)
230 4fk1_A Putative thioredoxin re 72.6 4 0.00014 36.0 4.9 51 87-140 181-232 (304)
231 1o94_A Tmadh, trimethylamine d 72.6 3.1 0.00011 42.0 4.6 49 90-143 575-645 (729)
232 3l8k_A Dihydrolipoyl dehydroge 72.3 5.4 0.00018 37.7 6.0 52 87-143 215-271 (466)
233 1gte_A Dihydropyrimidine dehyd 71.1 9.7 0.00033 40.1 8.1 48 93-142 377-440 (1025)
234 2v3a_A Rubredoxin reductase; a 70.1 6.8 0.00023 35.8 6.0 46 93-143 67-112 (384)
235 4a9w_A Monooxygenase; baeyer-v 68.1 6.8 0.00023 34.9 5.5 41 284-326 310-352 (357)
236 2bc0_A NADH oxidase; flavoprot 67.6 6.9 0.00024 37.2 5.7 50 91-143 97-148 (490)
237 2x8g_A Thioredoxin glutathione 67.3 14 0.00049 36.0 8.0 60 85-144 325-395 (598)
238 4eqs_A Coenzyme A disulfide re 67.2 7.4 0.00025 36.5 5.7 47 94-143 65-115 (437)
239 4a5l_A Thioredoxin reductase; 66.2 5.9 0.0002 34.7 4.6 54 87-143 67-120 (314)
240 3ntd_A FAD-dependent pyridine 65.5 9.4 0.00032 36.9 6.2 49 92-143 64-116 (565)
241 3ics_A Coenzyme A-disulfide re 65.5 10 0.00035 36.9 6.6 52 88-142 95-150 (588)
242 1nhp_A NADH peroxidase; oxidor 65.5 12 0.0004 35.1 6.7 50 91-143 61-114 (447)
243 2vdc_G Glutamate synthase [NAD 65.5 3.9 0.00013 38.7 3.4 47 93-142 309-376 (456)
244 2ywl_A Thioredoxin reductase r 65.5 8.9 0.0003 30.5 5.2 40 285-326 132-171 (180)
245 3lxd_A FAD-dependent pyridine 65.1 6.1 0.00021 36.6 4.6 51 88-143 67-118 (415)
246 3oc4_A Oxidoreductase, pyridin 64.6 8.7 0.0003 36.0 5.6 49 92-143 64-114 (452)
247 2cdu_A NADPH oxidase; flavoenz 64.4 11 0.00039 35.2 6.4 50 91-143 63-116 (452)
248 2gqw_A Ferredoxin reductase; f 64.2 4.9 0.00017 37.3 3.8 43 96-143 69-112 (408)
249 3sx6_A Sulfide-quinone reducta 63.0 4.4 0.00015 37.9 3.2 51 88-144 61-112 (437)
250 3cp8_A TRNA uridine 5-carboxym 62.8 8 0.00027 38.3 5.1 53 287-346 377-429 (641)
251 2i0z_A NAD(FAD)-utilizing dehy 62.5 6.8 0.00023 36.8 4.5 40 286-325 402-443 (447)
252 3cgb_A Pyridine nucleotide-dis 61.8 8.4 0.00029 36.5 5.0 49 92-143 98-151 (480)
253 1lqt_A FPRA; NADP+ derivative, 61.5 7.1 0.00024 36.9 4.4 51 90-143 250-325 (456)
254 3uox_A Otemo; baeyer-villiger 61.5 5.7 0.0002 38.5 3.8 46 92-145 344-392 (545)
255 3h8l_A NADH oxidase; membrane 60.1 11 0.00039 34.6 5.5 52 87-143 57-112 (409)
256 1ebd_A E3BD, dihydrolipoamide 59.5 16 0.00054 34.3 6.4 50 88-143 93-144 (455)
257 2vdc_G Glutamate synthase [NAD 57.3 12 0.00039 35.4 5.0 40 284-326 405-444 (456)
258 1m6i_A Programmed cell death p 57.1 5.6 0.00019 38.0 2.8 41 98-143 102-143 (493)
259 4a5l_A Thioredoxin reductase; 56.9 20 0.00067 31.2 6.3 40 284-325 272-311 (314)
260 4b63_A L-ornithine N5 monooxyg 56.8 14 0.00047 35.3 5.6 55 88-142 147-212 (501)
261 3klj_A NAD(FAD)-dependent dehy 56.7 3.2 0.00011 38.3 1.0 45 85-144 187-231 (385)
262 3iwa_A FAD-dependent pyridine 56.1 13 0.00045 35.0 5.2 44 97-143 77-124 (472)
263 3gwf_A Cyclohexanone monooxyge 55.7 4.9 0.00017 39.0 2.2 44 96-146 340-386 (540)
264 3vrd_B FCCB subunit, flavocyto 55.6 15 0.0005 33.7 5.4 41 285-326 283-324 (401)
265 3fg2_P Putative rubredoxin red 55.6 15 0.00051 33.8 5.4 49 88-142 59-108 (404)
266 2a8x_A Dihydrolipoyl dehydroge 55.2 17 0.00058 34.1 5.9 50 88-143 93-145 (464)
267 1chu_A Protein (L-aspartate ox 55.1 9.2 0.00031 37.0 4.0 43 284-326 363-411 (540)
268 2gqf_A Hypothetical protein HI 54.5 9.1 0.00031 35.4 3.7 37 286-322 361-399 (401)
269 3kd9_A Coenzyme A disulfide re 53.3 10 0.00034 35.6 3.9 42 97-143 70-113 (449)
270 3v76_A Flavoprotein; structura 52.9 6.9 0.00023 36.5 2.6 35 286-320 380-416 (417)
271 1y56_A Hypothetical protein PH 50.9 11 0.00039 35.8 3.9 53 88-143 163-218 (493)
272 1dxl_A Dihydrolipoamide dehydr 48.5 26 0.00088 32.9 6.0 37 285-324 306-342 (470)
273 1v59_A Dihydrolipoamide dehydr 48.4 19 0.00067 33.8 5.1 37 285-324 314-350 (478)
274 1ojt_A Surface protein; redox- 48.2 25 0.00087 33.1 5.9 37 285-324 313-349 (482)
275 3g5s_A Methylenetetrahydrofola 46.9 26 0.00088 32.7 5.3 44 287-335 327-370 (443)
276 4gcm_A TRXR, thioredoxin reduc 45.4 35 0.0012 29.7 6.0 41 283-325 265-305 (312)
277 1qo8_A Flavocytochrome C3 fuma 43.4 13 0.00045 36.1 3.1 41 286-326 519-564 (566)
278 3h28_A Sulfide-quinone reducta 43.3 44 0.0015 30.9 6.6 48 90-143 60-108 (430)
279 3dgz_A Thioredoxin reductase 2 43.1 37 0.0013 32.0 6.1 40 284-325 314-353 (488)
280 4dna_A Probable glutathione re 43.0 35 0.0012 31.9 5.9 39 284-325 294-332 (463)
281 2qae_A Lipoamide, dihydrolipoy 42.9 35 0.0012 32.0 5.9 39 284-324 302-340 (468)
282 4ap3_A Steroid monooxygenase; 41.8 13 0.00043 36.1 2.6 43 96-146 353-398 (549)
283 3dgh_A TRXR-1, thioredoxin red 41.7 31 0.0011 32.4 5.4 39 284-324 314-352 (483)
284 1y0p_A Fumarate reductase flav 41.6 14 0.00048 35.9 2.9 40 286-325 524-568 (571)
285 3dk9_A Grase, GR, glutathione 41.6 33 0.0011 32.2 5.5 38 284-324 319-356 (478)
286 3o0h_A Glutathione reductase; 41.6 41 0.0014 31.7 6.2 39 284-325 314-352 (484)
287 1d4d_A Flavocytochrome C fumar 41.2 13 0.00045 36.2 2.7 40 286-325 525-569 (572)
288 1kf6_A Fumarate reductase flav 40.7 22 0.00075 34.9 4.2 44 282-325 366-415 (602)
289 2eq6_A Pyruvate dehydrogenase 40.5 35 0.0012 32.0 5.5 37 285-324 298-334 (464)
290 2gjc_A Thiazole biosynthetic e 40.4 13 0.00044 33.4 2.3 40 287-326 282-325 (326)
291 3qfa_A Thioredoxin reductase 1 40.2 43 0.0015 32.0 6.1 39 284-324 342-380 (519)
292 3lad_A Dihydrolipoamide dehydr 40.1 37 0.0013 31.8 5.6 39 284-325 306-344 (476)
293 3l8k_A Dihydrolipoyl dehydroge 39.7 28 0.00096 32.6 4.7 38 284-324 296-333 (466)
294 1lvl_A Dihydrolipoamide dehydr 39.3 62 0.0021 30.2 7.0 44 92-143 102-145 (458)
295 3ic9_A Dihydrolipoamide dehydr 39.2 31 0.0011 32.7 4.9 38 284-324 301-338 (492)
296 3urh_A Dihydrolipoyl dehydroge 37.8 33 0.0011 32.4 4.9 39 284-325 326-364 (491)
297 4at0_A 3-ketosteroid-delta4-5a 37.8 15 0.00052 35.1 2.5 38 286-323 466-508 (510)
298 1xdi_A RV3303C-LPDA; reductase 37.1 36 0.0012 32.2 5.0 37 285-324 306-342 (499)
299 2yqu_A 2-oxoglutarate dehydrog 35.0 32 0.0011 32.0 4.3 37 285-324 291-327 (455)
300 1w4x_A Phenylacetone monooxyge 34.9 24 0.0008 34.0 3.3 47 92-145 344-392 (542)
301 1jnr_A Adenylylsulfate reducta 34.9 35 0.0012 33.6 4.7 40 285-325 428-467 (643)
302 1lqt_A FPRA; NADP+ derivative, 34.1 30 0.001 32.5 3.9 39 286-326 349-387 (456)
303 2x8g_A Thioredoxin glutathione 33.8 53 0.0018 31.9 5.7 38 285-324 422-459 (598)
304 1ges_A Glutathione reductase; 33.3 51 0.0017 30.7 5.3 37 285-324 292-328 (450)
305 2hqm_A GR, grase, glutathione 32.7 53 0.0018 30.8 5.4 37 285-324 311-347 (479)
306 2bs2_A Quinol-fumarate reducta 32.5 34 0.0011 34.0 4.0 44 282-325 379-428 (660)
307 2uzz_A N-methyl-L-tryptophan o 32.4 23 0.0008 31.7 2.7 73 237-324 283-357 (372)
308 1zmd_A Dihydrolipoyl dehydroge 32.4 46 0.0016 31.2 4.9 38 284-324 308-345 (474)
309 4b1b_A TRXR, thioredoxin reduc 32.2 49 0.0017 31.9 5.0 41 284-326 346-386 (542)
310 3jsk_A Cypbp37 protein; octame 31.7 23 0.00079 32.0 2.5 39 288-326 293-335 (344)
311 3pru_C Phycobilisome 32.1 kDa 31.4 1E+02 0.0034 24.2 5.7 25 18-42 53-77 (154)
312 2ky4_A Phycobilisome linker po 30.3 1E+02 0.0036 24.0 5.6 24 18-41 51-74 (149)
313 3ohw_B Phycobilisome LCM core- 30.0 90 0.0031 24.3 5.2 24 18-41 60-83 (148)
314 2r9z_A Glutathione amide reduc 29.4 69 0.0024 29.9 5.5 37 285-324 291-327 (463)
315 1gte_A Dihydropyrimidine dehyd 29.3 47 0.0016 34.8 4.7 39 284-325 469-507 (1025)
316 2wpf_A Trypanothione reductase 29.2 69 0.0024 30.2 5.5 37 285-324 319-355 (495)
317 1fec_A Trypanothione reductase 29.0 70 0.0024 30.2 5.5 37 285-324 315-351 (490)
318 1mo9_A ORF3; nucleotide bindin 28.5 57 0.002 31.1 4.9 36 285-323 342-377 (523)
319 1zk7_A HGII, reductase, mercur 27.5 61 0.0021 30.2 4.8 37 285-324 298-334 (467)
320 1cjc_A Protein (adrenodoxin re 27.2 41 0.0014 31.6 3.5 38 288-327 359-396 (460)
321 2h88_A Succinate dehydrogenase 26.9 70 0.0024 31.4 5.2 41 286-326 387-433 (621)
322 2gag_A Heterotetrameric sarcos 24.9 63 0.0021 33.6 4.6 38 286-327 408-445 (965)
323 4g6h_A Rotenone-insensitive NA 24.3 70 0.0024 30.4 4.5 37 287-324 363-399 (502)
324 3k30_A Histamine dehydrogenase 24.2 33 0.0011 34.1 2.3 37 286-326 639-675 (690)
325 1rp0_A ARA6, thiazole biosynth 23.6 46 0.0016 28.7 2.9 39 288-327 233-276 (284)
326 1o94_A Tmadh, trimethylamine d 22.8 36 0.0012 34.2 2.2 38 286-327 664-701 (729)
327 4b63_A L-ornithine N5 monooxyg 22.6 87 0.003 29.6 4.8 42 102-143 355-408 (501)
328 2wdq_A Succinate dehydrogenase 21.1 36 0.0012 33.1 1.8 39 287-325 379-423 (588)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.97 E-value=9.6e-29 Score=237.91 Aligned_cols=290 Identities=12% Similarity=0.081 Sum_probs=219.1
Q ss_pred cCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHHHHHHHH
Q 017660 18 DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMR 97 (368)
Q Consensus 18 d~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~l~~~l~ 97 (368)
+++|+.+|+++. ++++..+.++++++...++.+++++|+..+...+...... ....+++||+ ..|+++|++.++
T Consensus 134 ~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~----~~~~~~~gG~-~~l~~~l~~~~~ 207 (425)
T 3ka7_A 134 SGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRF----GGTGIPEGGC-KGIIDALETVIS 207 (425)
T ss_dssp CSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH----CSCEEETTSH-HHHHHHHHHHHH
T ss_pred CCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhc----CCccccCCCH-HHHHHHHHHHHH
Confidence 679999999985 5677788899999988899999999998888777664322 1235789996 679999999999
Q ss_pred HcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhcc-cc-CchhHHhhhccCccceEEEE
Q 017660 98 TRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSI-LC-NREEFLKVLNLASIDVVSVK 175 (368)
Q Consensus 98 ~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~-l~-~~~~~~~i~~l~~~~~~~v~ 175 (368)
++|++|+++++|++|..++ +++++|+++|++++||.||+|+|++.+.+|+++.. ++ +..+.+++..+.+.+.++++
T Consensus 208 ~~G~~i~~~~~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 285 (425)
T 3ka7_A 208 ANGGKIHTGQEVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVGTLQPSAGIKIC 285 (425)
T ss_dssp HTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEE
T ss_pred HcCCEEEECCceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhhCcCCCceEEEE
Confidence 9999999999999999887 77888988888999999999999999999987532 10 24556778888888888899
Q ss_pred EEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHhhhccCCCC
Q 017660 176 LWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFST 255 (368)
Q Consensus 176 l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~ 255 (368)
++++++.. . .+..+++.+......+...+...+...+++++++.++.+......+. .++.++.++++|++++|+..
T Consensus 286 l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~p~~~- 361 (425)
T 3ka7_A 286 LAADEPLV-G-HTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKN-LESEIEMGLEDLKEIFPGKR- 361 (425)
T ss_dssp EEESSCSS-C-SSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGG-HHHHHHHHHHHHHHHSTTCC-
T ss_pred eecCCCcc-C-cCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEeccccccccc-hHHHHHHHHHHHHHhCCCCc-
Confidence 99998754 2 33444433221111233445555666656777776654432221122 34567999999999999843
Q ss_pred CceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHH
Q 017660 256 ATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 323 (368)
Q Consensus 256 ~~i~~~~~~~~~~~~~~~~pg~~~~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~ 323 (368)
.+++ .+.+|+.++|.+.++. ..+|...+|++|||+||||+.+.+| .+|++|+.||+.||++|+.
T Consensus 362 ~~~~--~v~~~~~~~P~~~~~~-~~~~~~~~p~~gL~laG~~~~~~gg-~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 362 YEVL--LIQSYHDEWPVNRAAS-GTDPGNETPFSGLYVVGDGAKGKGG-IEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp EEEE--EEEEEBTTBCSBSSCT-TCCCCSBCSSBTEEECSTTSCCTTC-CHHHHHHHHHHHHHHC---
T ss_pred eEEE--EEEEECCCcccccccc-CCCCCCCCCcCCeEEeCCccCCCCC-CccHHHHHHHHHHHHHhhC
Confidence 2343 5677999999998884 4567888999999999999997677 6999999999999999873
No 2
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.95 E-value=3.7e-26 Score=225.73 Aligned_cols=309 Identities=17% Similarity=0.133 Sum_probs=216.3
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHH-----HhhcCCCcceeeecCCcchhhhH
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIFE 90 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~-----~~~~~~~~~~~~~~GG~~~~L~~ 90 (368)
.++++|+.+|+++.+.++. .+.++++++...++.+++++|+..++..+... +.....+....+++||+ ..|++
T Consensus 142 ~~~~~s~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~-~~l~~ 219 (520)
T 1s3e_A 142 EWDNMTMKELLDKLCWTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS-GQVSE 219 (520)
T ss_dssp HHHTSBHHHHHHHHCSSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT-HHHHH
T ss_pred hhhccCHHHHHHhhCCCHH-HHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH-HHHHH
Confidence 4789999999999777665 57899999989999999999998876554321 01111122335678996 57999
Q ss_pred HHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCcc
Q 017660 91 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 169 (368)
Q Consensus 91 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~ 169 (368)
+|++.+ |++|++|++|++|..++ ++++ |.+. |++++||+||+|+|+..+.+++.++.++ ....+.++.+.+.
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~ 292 (520)
T 1s3e_A 220 RIMDLL---GDRVKLERPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLG 292 (520)
T ss_dssp HHHHHH---GGGEESSCCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBC
T ss_pred HHHHHc---CCcEEcCCeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCc
Confidence 998765 78999999999999876 5565 6665 6789999999999999998887554442 4456778888888
Q ss_pred ceEEEEEEecCCCCCCCCCce-ee--cCCCCccceeeeccccccccCCCCCeEEEEEee--cCCCCCCCCHHHHHHHHHH
Q 017660 170 DVVSVKLWFDKKVTVPNVSNA-CS--GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVS 244 (368)
Q Consensus 170 ~~~~v~l~~~~~~~~~~~~~~-~~--~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~e~~~~~~~ 244 (368)
+..++++.+++++|....... .+ ..+....+ ++|.+. .+.+..++..... .+..|.+++++++++.+++
T Consensus 293 ~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~-~~d~~~-----~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~ 366 (520)
T 1s3e_A 293 SVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAY-TLDDTK-----PEGNYAAIMGFILAHKARKLARLTKEERLKKLCE 366 (520)
T ss_dssp CEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSE-EEECCC-----TTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCcccCCCCCceeeccCCCCceEE-EeeCCC-----CCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHH
Confidence 899999999998774332111 11 11112222 344331 1112244433222 1234677889999999999
Q ss_pred HHhhhccCCCCCceeeeEEeecCCCc------c-ccCCCCcC-CCCCCCCCCCceEEeccccccCCCCccchHHhHHHHH
Q 017660 245 YLSKCIKDFSTATVMDHKIRRFPKSL------T-HFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 316 (368)
Q Consensus 245 ~l~~~~p~~~~~~i~~~~~~~~~~~~------~-~~~pg~~~-~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~ 316 (368)
+|+++||......+......+|..+. . .+.||... .++...+|++||||||++++..++ ++|+||+.||.+
T Consensus 367 ~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~-g~v~GAi~SG~~ 445 (520)
T 1s3e_A 367 LYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWS-GYMEGAVEAGER 445 (520)
T ss_dssp HHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSST-TSHHHHHHHHHH
T ss_pred HHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCc-EEhHHHHHHHHH
Confidence 99999985311245555666674321 1 23444321 234456788999999999987677 699999999999
Q ss_pred HHHHHHHHhCCCCccccccCCCCc
Q 017660 317 AANRVVDYLGDGSFSKIIPVEEDE 340 (368)
Q Consensus 317 aA~~Il~~~~~~~~~~~~~~~~~~ 340 (368)
||++|++.++..++..+|..++++
T Consensus 446 aA~~i~~~l~~~~~~~~~~~~~~~ 469 (520)
T 1s3e_A 446 AAREILHAMGKIPEDEIWQSEPES 469 (520)
T ss_dssp HHHHHHHHTTSSCGGGSSCCCCCC
T ss_pred HHHHHHHHHhcCccccccccCCcc
Confidence 999999999887778888877655
No 3
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.95 E-value=7.9e-25 Score=210.50 Aligned_cols=285 Identities=13% Similarity=0.079 Sum_probs=200.6
Q ss_pred cCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHHHHHHHH
Q 017660 18 DSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMR 97 (368)
Q Consensus 18 d~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~l~~~l~ 97 (368)
+++|+.+|+++.+++++..+.++.+++...++.+++++|+..+...+...... ....+++||+ ..|+++|++.++
T Consensus 126 ~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~~gG~-~~l~~~l~~~~~ 200 (421)
T 3nrn_A 126 EEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAALRW----GGPGLIRGGC-KAVIDELERIIM 200 (421)
T ss_dssp CCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHH----CSCEEETTCH-HHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhc----CCcceecCCH-HHHHHHHHHHHH
Confidence 45899999998768888888899999999999999999998888777655321 1235789995 679999999999
Q ss_pred HcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccceEEEEEE
Q 017660 98 TRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLW 177 (368)
Q Consensus 98 ~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~~~v~l~ 177 (368)
++|++|+++++|++|..++ +++ |..+|++++||.||+|+|++.+.+|++...++ ..+.+++..+.+.+.+++++.
T Consensus 201 ~~G~~i~~~~~V~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~v~l~ 275 (421)
T 3nrn_A 201 ENKGKILTRKEVVEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFD-RDYLKQVDSIEPSEGIKFNLA 275 (421)
T ss_dssp TTTCEEESSCCEEEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSC-HHHHHHHHTCCCCCEEEEEEE
T ss_pred HCCCEEEcCCeEEEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCC-HHHHHHHhCCCCCceEEEEEE
Confidence 9999999999999999876 666 66678899999999999999999998743332 345667788888888899999
Q ss_pred ecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHhhhccCCCCCc
Q 017660 178 FDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLSKCIKDFSTAT 257 (368)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~ 257 (368)
++++.. . .++.+++.+... ..+...++..+...+++++++.+..+.. +.+.++.++.++++|++++| . .+
T Consensus 276 ~~~~~~-~-~~~~~~~~~~~~-~~i~~~s~~~p~~ap~G~~~~~~~~~~~----~~~~~~~~~~~~~~L~~~~p--~-~~ 345 (421)
T 3nrn_A 276 VPGEPR-I-GNTIVFTPGLMI-NGFNEPSALDKSLAREGYTLIMAHMALK----NGNVKKAIEKGWEELLEIFP--E-GE 345 (421)
T ss_dssp EESSCS-S-CSSEEECTTSSS-CEEECGGGTCGGGSCTTEEEEEEEEECT----TCCHHHHHHHHHHHHHHHCT--T-CE
T ss_pred EcCCcc-c-CCeEEEcCCcce-eeEeccCCCCCCcCCCCceEEEEEEeec----cccHHHHHHHHHHHHHHHcC--C-Ce
Confidence 988743 2 334444433221 1223334444444545566665544421 22344668999999999999 2 24
Q ss_pred eeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCCCCccc
Q 017660 258 VMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSK 332 (368)
Q Consensus 258 i~~~~~~~~~~~~~~~~pg~~~~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~~~~~~ 332 (368)
++ .+.+|+.+++.+.+..... +. .++ +|||+|||++.+.++ .+||||+.||+.||++| +.++..+
T Consensus 346 ~~--~~~~~~~~~p~~~~~~~~~-~~-~~~-~gl~laGd~~~~~~g-~~~~ga~~sg~~aA~~l----~~~~~~~ 410 (421)
T 3nrn_A 346 PL--LAQVYRDGNPVNRTRAGLH-IE-WPL-NEVLVVGDGYRPPGG-IEVDGIALGVMKALEKL----NLGSFSE 410 (421)
T ss_dssp EE--EEEEC-------------C-CC-CCC-SSEEECSTTCCCTTC-CHHHHHHHHHHHHHHHT----TSCCCCT
T ss_pred EE--EeeeccCCCCcccccCCCC-CC-CCC-CcEEEECCcccCCCc-eeeehHHHHHHHHHHHh----CcCchhh
Confidence 44 3455777777664322112 22 677 999999999986444 46799999999999999 4446654
No 4
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.93 E-value=4.2e-25 Score=214.31 Aligned_cols=294 Identities=13% Similarity=0.110 Sum_probs=201.0
Q ss_pred hhccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCch-hhhHHHHHHHHHHH-----HhhcCCCcceeeecCCcchhh
Q 017660 15 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKI 88 (368)
Q Consensus 15 ~~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~sa~~~~~~l~~~-----~~~~~~~~~~~~~~GG~~~~L 88 (368)
..++++|+.+|+++.+.++. .+.++++++...++.+++ ++|+..++..+... ++. ..+....++.||+ ..|
T Consensus 141 ~~~~~~s~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~-~~l 217 (453)
T 2yg5_A 141 RDLDTVSFKQWLINQSDDAE-ARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGM-QQV 217 (453)
T ss_dssp HHHHSSBHHHHHHHHCSCHH-HHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCT-HHH
T ss_pred hhhhhccHHHHHHhhcCCHH-HHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCCh-HHH
Confidence 45789999999999877665 456888887778888999 99998876654321 000 0011234678996 579
Q ss_pred hHHHHHHHHHcCCEEeccceeeeEEecCCCce-EEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccC
Q 017660 89 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCC-ISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 167 (368)
Q Consensus 89 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~-v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~ 167 (368)
+++|++.+ |++|++|++|++|..++ ++ +. |+++|+++.||+||+|+|+..+.+|+..+.++ ....+.++.+.
T Consensus 218 ~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~v~-v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~ 290 (453)
T 2yg5_A 218 SIRMAEAL---GDDVFLNAPVRTVKWNE--SGATV-LADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQS 290 (453)
T ss_dssp HHHHHHHH---GGGEECSCCEEEEEEET--TEEEE-EETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEE
T ss_pred HHHHHHhc---CCcEEcCCceEEEEEeC--CceEE-EEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCC
Confidence 99998765 78999999999999877 55 54 66678899999999999999998887554442 34556778888
Q ss_pred ccceEEEEEEecCCCCCCCCCc-eeecCCCCccceeeeccccccccCCCCCeEEEEEee--cCCCCCCCCHHHHHHHHHH
Q 017660 168 SIDVVSVKLWFDKKVTVPNVSN-ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVS 244 (368)
Q Consensus 168 ~~~~~~v~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~e~~~~~~~ 244 (368)
+.+..++++.|++++|...... .+...+....+ .++.+. .+.+..++..... .+..|.+++++++++.+++
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~-~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 364 (453)
T 2yg5_A 291 LGLVIKVHAVYETPFWREDGLSGTGFGASEVVQE-VYDNTN-----HEDDRGTLVAFVSDEKADAMFELSAEERKATILA 364 (453)
T ss_dssp ECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCE-EEECCC-----TTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCCCCCCceeecCCCCeEE-EEeCCC-----CCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHH
Confidence 8888899999998876432211 11111222222 344331 1111234433222 1234556788999999999
Q ss_pred HHhhhccCCCCCceeeeEEeecCCCc-------cccCCCCcC-CCCCCCCCCCceEEeccccccCCCCccchHHhHHHHH
Q 017660 245 YLSKCIKDFSTATVMDHKIRRFPKSL-------THFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 316 (368)
Q Consensus 245 ~l~~~~p~~~~~~i~~~~~~~~~~~~-------~~~~pg~~~-~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~ 316 (368)
.|+++||... .+++.....+|.... +.+.||... .++...+|++||||||++++..++ ++++||+.||++
T Consensus 365 ~L~~~~~~~~-~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~-g~v~gA~~SG~~ 442 (453)
T 2yg5_A 365 SLARYLGPKA-EEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGY-QHVDGAVRMGQR 442 (453)
T ss_dssp HHHHHHCGGG-GCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTT-TSHHHHHHHHHH
T ss_pred HHHHHhCccC-CCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccc-cchHHHHHHHHH
Confidence 9999997522 135555566675431 123455321 233456789999999999986677 699999999999
Q ss_pred HHHHHHHHhC
Q 017660 317 AANRVVDYLG 326 (368)
Q Consensus 317 aA~~Il~~~~ 326 (368)
||++|++.++
T Consensus 443 aA~~i~~~l~ 452 (453)
T 2yg5_A 443 TAADIIARSK 452 (453)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhc
Confidence 9999998865
No 5
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.93 E-value=5.5e-25 Score=214.85 Aligned_cols=295 Identities=13% Similarity=0.084 Sum_probs=211.1
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH----------hhc--------------
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAH-------------- 71 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~----------~~~-------------- 71 (368)
..+++|+.+|+++ ++++++.+.+++|++.+.++.+++++|+..++..+.... +..
T Consensus 140 ~~~~~s~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~ 218 (477)
T 3nks_A 140 KEPDETVHSFAQR-RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQ 218 (477)
T ss_dssp CSSCCBHHHHHHH-HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHH
T ss_pred CCCCcCHHHHHHH-hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhh
Confidence 3478999999998 678999999999999999999999999988766544310 000
Q ss_pred --CCCcceeeecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhh
Q 017660 72 --QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELI 149 (368)
Q Consensus 72 --~~~~~~~~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll 149 (368)
.+...+.+++||+ ..|+++|++.++++|++|+++++|++|..++ ++++.|.++++++.||+||+|+|++.+.+|+
T Consensus 219 ~~~~~~~~~~~~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~--~~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll 295 (477)
T 3nks_A 219 ALAERWSQWSLRGGL-EMLPQALETHLTSRGVSVLRGQPVCGLSLQA--EGRWKVSLRDSSLEADHVISAIPASVLSELL 295 (477)
T ss_dssp HHHTTCSEEEETTCT-THHHHHHHHHHHHTTCEEECSCCCCEEEECG--GGCEEEECSSCEEEESEEEECSCHHHHHHHS
T ss_pred hcccCccEEEECCCH-HHHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CceEEEEECCeEEEcCEEEECCCHHHHHHhc
Confidence 0122356778997 5799999999999999999999999999876 4435677777789999999999999999998
Q ss_pred hhccccCchhHHhhhccCccceEEEEEEecCCCCCCCCCceeecCCC---CccceeeeccccccccCCCCCeEEEEEeec
Q 017660 150 KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD---SLAWTFFDLNKIYDEHKDDSATVIQADFYH 226 (368)
Q Consensus 150 ~~~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~ 226 (368)
++.. ++..+.+..+.+.++.++++.|++++++...+..+..... ..++ +++.+.......+++..++.+.+..
T Consensus 296 ~~~~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~l~~~~gg 371 (477)
T 3nks_A 296 PAEA---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGI-VYDSVAFPEQDGSPPGLRVTVMLGG 371 (477)
T ss_dssp CGGG---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEE-ECHHHHCGGGSTTTTCEEEEEEECH
T ss_pred cccC---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEE-EEeccccCCCCCCCCceEEEEEECC
Confidence 7642 3456778888888899999999988763333322221111 1123 3443322111212345665443321
Q ss_pred C------CCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCC----CCCCCceEEecc
Q 017660 227 A------NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG----FTSFPNLFMAGD 296 (368)
Q Consensus 227 ~------~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~----~~~~~~L~laGd 296 (368)
. ....+.+++++++.++++|.++++... ++....+.+|+++++.|.+|+....... ....+|||+|||
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~ 449 (477)
T 3nks_A 372 SWLQTLEASGCVLSQELFQQRAQEAAATQLGLKE--MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGA 449 (477)
T ss_dssp HHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECST
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEcc
Confidence 1 111246899999999999999996432 4667778889999999998865321111 112368999999
Q ss_pred ccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 297 WITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 297 ~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
|+. | .++++|+.||+.+|++|+.+
T Consensus 450 ~~~-G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 450 SYE-G---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TTS-C---CSHHHHHHHHHHHHHHHHHC
T ss_pred CCC-C---CcHHHHHHHHHHHHHHHHhc
Confidence 985 3 46899999999999999875
No 6
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.93 E-value=2.1e-24 Score=211.81 Aligned_cols=293 Identities=14% Similarity=0.071 Sum_probs=203.3
Q ss_pred hhhccCccHHHHHHHcC--CCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH---hhcCCCcceeeecCCcchhh
Q 017660 14 WRKYDSITARELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LAHQKNFDLVWCRGTLREKI 88 (368)
Q Consensus 14 ~~~ld~~S~~d~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~---~~~~~~~~~~~~~GG~~~~L 88 (368)
+..++++|+.+||++.+ +++.. +.++++++...++.+++++|+..++..+.... ...........+.||+ ..|
T Consensus 180 ~~~~~~~s~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l 257 (495)
T 2vvm_A 180 FRKYDEMSYSERIDQIRDELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAF 257 (495)
T ss_dssp HHHHHTSBHHHHHHHHGGGCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHH
T ss_pred hhhhhhhhHHHHHHHhhccCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHH
Confidence 46788999999999877 77764 57899999999999999999988776543210 0000011234568996 579
Q ss_pred hHHHHHHHHHcC-CEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhcc
Q 017660 89 FEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 166 (368)
Q Consensus 89 ~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l 166 (368)
+++|.+.+++.| ++|+++++|++|..++ +++. |++. |++++||+||+|+|+..+.++...+.++ ....++++.+
T Consensus 258 ~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~ 333 (495)
T 2vvm_A 258 ARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAAR-VTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAG 333 (495)
T ss_dssp HHHHHHHHHTTTCEEEESSCCEEEEEECS--SSEE-EEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHC
T ss_pred HHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEEE-EEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhc
Confidence 999999999998 9999999999999876 4454 6665 5689999999999999998876444442 4456778888
Q ss_pred CccceEEEEEEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 017660 167 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 246 (368)
Q Consensus 167 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~~~~l 246 (368)
.+.+..++++.|+++++. .+..+...+....+ +++... .+.+..++.. +..... .+++++..+.+++.|
T Consensus 334 ~~~~~~kv~l~~~~~~~~--~~~g~~~~~~~~~~-~~~~~~-----~~~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L 402 (495)
T 2vvm_A 334 HVSMCTKVHAEVDNKDMR--SWTGIAYPFNKLCY-AIGDGT-----TPAGNTHLVC-FGNSAN--HIQPDEDVRETLKAV 402 (495)
T ss_dssp CCCCCEEEEEEESCGGGG--GEEEEECSSCSSCE-EEEEEE-----CTTSCEEEEE-EECSTT--CCCTTTCHHHHHHHH
T ss_pred CCCceeEEEEEECCccCC--CceeEecCCCCcEE-EecCCC-----CCCCCeEEEE-EeCccc--cCCCHHHHHHHHHHH
Confidence 888889999999987652 22212111222223 232221 1123344433 332222 134556678889999
Q ss_pred hhhccCCCCCceeeeEEeecCC------CccccCCCCcC-CCCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHH
Q 017660 247 SKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 319 (368)
Q Consensus 247 ~~~~p~~~~~~i~~~~~~~~~~------~~~~~~pg~~~-~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~ 319 (368)
++++|+.. ++....+.+|.. +++.+.||... .++...+|.+||||||++++..++ ++||||+.||++||+
T Consensus 403 ~~~~~~~~--~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~-g~veGAi~SG~raA~ 479 (495)
T 2vvm_A 403 GQLAPGTF--GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWR-SFIDGAIEEGTRAAR 479 (495)
T ss_dssp HTTSTTSC--CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSST-TSHHHHHHHHHHHHH
T ss_pred HHhcCCCC--CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCc-eEEEhHHHHHHHHHH
Confidence 99998743 466666677843 33334455421 122334578999999999986677 799999999999999
Q ss_pred HHHHHhC
Q 017660 320 RVVDYLG 326 (368)
Q Consensus 320 ~Il~~~~ 326 (368)
+|++.++
T Consensus 480 ~i~~~l~ 486 (495)
T 2vvm_A 480 VVLEELG 486 (495)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9999987
No 7
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.92 E-value=5.2e-24 Score=208.00 Aligned_cols=293 Identities=14% Similarity=0.094 Sum_probs=201.4
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH----------hh-----------cCCC
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LA-----------HQKN 74 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~----------~~-----------~~~~ 74 (368)
..+++|+.+|+++ .+++++.+.++.|++...++.+++++|+..++..+..+. +. ....
T Consensus 145 ~~~~~s~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (478)
T 2ivd_A 145 EGVDESLAAFGRR-HLGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTA 223 (478)
T ss_dssp TTCCCBHHHHHHH-HTCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCS
T ss_pred CCCCCCHHHHHHH-hhCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCccccc
Confidence 3678999999998 588999999999999999999999999877655443221 00 0011
Q ss_pred ----cceeeecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCeEEecCEEEEeeChhhHH
Q 017660 75 ----FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGISTLQ 146 (368)
Q Consensus 75 ----~~~~~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~~~~ad~VV~a~p~~~l~ 146 (368)
....+++||+ ..|+++|++.+ |++|+++++|++|..++ +++ .|++ +|+++.||+||+|+|++.+.
T Consensus 224 ~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~-~v~~~~~~~g~~~~ad~vV~a~~~~~~~ 296 (478)
T 2ivd_A 224 PKLSGALSTFDGGL-QVLIDALAASL---GDAAHVGARVEGLARED--GGW-RLIIEEHGRRAELSVAQVVLAAPAHATA 296 (478)
T ss_dssp CCCCCCEEEETTCT-HHHHHHHHHHH---GGGEESSEEEEEEECC----CC-EEEEEETTEEEEEECSEEEECSCHHHHH
T ss_pred ccccccEEEECCCH-HHHHHHHHHHh---hhhEEcCCEEEEEEecC--CeE-EEEEeecCCCceEEcCEEEECCCHHHHH
Confidence 3456788996 57999999877 57999999999999876 444 4665 46789999999999999999
Q ss_pred HhhhhccccCchhHHhhhccCccceEEEEEEecCCCCCC-CCCceeecC--CCCccceeeeccccccccCCCCCeEEEEE
Q 017660 147 ELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQAD 223 (368)
Q Consensus 147 ~ll~~~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~--~~~~~~~~~d~s~~~~~~~~~~~~v~~~~ 223 (368)
+|+++ + +....+.+..+.+.++.++.+.++++++.. ..+..+... +....+..++.+ ..+...+++..++.+.
T Consensus 297 ~ll~~--l-~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~p~g~~~l~~~ 372 (478)
T 2ivd_A 297 KLLRP--L-DDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHAST-TFPFRAEGGRVLYSCM 372 (478)
T ss_dssp HHHTT--T-CHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHH-HCGGGBSTTCEEEEEE
T ss_pred HHhhc--c-CHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcc-cCCCcCCCCCEEEEEE
Confidence 88864 2 244567788888888999999999886532 122222111 111222233322 1122222344555443
Q ss_pred eec--CCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCC----CCCCCCCCceEEeccc
Q 017660 224 FYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDW 297 (368)
Q Consensus 224 ~~~--~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~----p~~~~~~~~L~laGd~ 297 (368)
... +..+.+.+++++.+.+++.|+++||... ++....+.+|+.+++.+.+|..... +...+ .+||||||++
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~ 449 (478)
T 2ivd_A 373 VGGARQPGLVEQDEDALAALAREELKALAGVTA--RPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNA 449 (478)
T ss_dssp EECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTT
T ss_pred eCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccC
Confidence 332 2234567899999999999999998754 4555567789998877777753211 11112 6899999999
Q ss_pred cccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 298 ITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 298 ~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
+. + .+++||+.||+.||+.|++.++.
T Consensus 450 ~~-g---~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 450 YK-G---VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp TS-C---CSHHHHHHHHHHHHHHHCC----
T ss_pred CC-C---CCHHHHHHHHHHHHHHHHHhhcc
Confidence 83 2 36899999999999999988764
No 8
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.91 E-value=4.2e-23 Score=202.73 Aligned_cols=291 Identities=10% Similarity=0.059 Sum_probs=156.9
Q ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHHHHHHHHHc
Q 017660 20 ITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 99 (368)
Q Consensus 20 ~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~l~~~l~~~ 99 (368)
.|+.+++.++..++. ++.++... ...++..|.+.++...+ +... .. .....+++||+ .+|+++|++.++++
T Consensus 164 ~~~~~~~~~~~~~~~-l~~~l~~~-~~~~g~~p~~~~~~~~~--~~~~--~~--~~G~~~p~GG~-~~l~~aL~~~~~~~ 234 (501)
T 4dgk_A 164 RSVYSKVASYIEDEH-LRQAFSFH-SLLVGGNPFATSSIYTL--IHAL--ER--EWGVWFPRGGT-GALVQGMIKLFQDL 234 (501)
T ss_dssp HHHHHHHHTTCCCHH-HHHHHHHH-HHHHHSCC--CCCTHHH--HHHH--HS--CCCEEEETTHH-HHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHhccHH-HHhhhhhh-hcccCCCcchhhhhhhh--hhhh--hc--cCCeEEeCCCC-cchHHHHHHHHHHh
Confidence 367788887544444 44555532 23445566666554322 1111 11 22346899996 57999999999999
Q ss_pred CCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHH-HhhhhccccCchhHHhhhccCcc-ceEEEEE
Q 017660 100 GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ-ELIKNSILCNREEFLKVLNLASI-DVVSVKL 176 (368)
Q Consensus 100 G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~-~ll~~~~l~~~~~~~~i~~l~~~-~~~~v~l 176 (368)
|++|++|++|++|..++ +++++|++. |+++.||+||++++++.+. .|++....+ ....+.+...++. ..+++++
T Consensus 235 Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~-~~~~~~~~~~~~~~s~~~~~~ 311 (501)
T 4dgk_A 235 GGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA-VKQSNKLQTKRMSNSLFVLYF 311 (501)
T ss_dssp TCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC----------------------------CCEEEEEEE
T ss_pred CCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc-hhhhhhhhccccCCceeEEEe
Confidence 99999999999999988 789999986 7899999999999998775 566654332 2334455555553 4667788
Q ss_pred EecCCCCCCCCCceeecCCC--------------Cccceeee-ccccccccCCCCCeEEEEE-eecCCCCCC----CCHH
Q 017660 177 WFDKKVTVPNVSNACSGFGD--------------SLAWTFFD-LNKIYDEHKDDSATVIQAD-FYHANELMP----LKDD 236 (368)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~d-~s~~~~~~~~~~~~v~~~~-~~~~~~~~~----~~~~ 236 (368)
.++++......++.+++.+. .....+.. .+...+...+++.+.+.+. ..+...+.+ ..++
T Consensus 312 ~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~ 391 (501)
T 4dgk_A 312 GLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGP 391 (501)
T ss_dssp EESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHH
T ss_pred cccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHH
Confidence 88876542212223332110 00011111 1222234444555544332 222222222 2356
Q ss_pred HHHHHHHHHHhhh-ccCCCCCceeeeEEeecCCCccccCC---C-----------CcCCCCCC-CCCCCceEEecccccc
Q 017660 237 QVVAKAVSYLSKC-IKDFSTATVMDHKIRRFPKSLTHFFP---G-----------SYKYMMRG-FTSFPNLFMAGDWITT 300 (368)
Q Consensus 237 e~~~~~~~~l~~~-~p~~~~~~i~~~~~~~~~~~~~~~~p---g-----------~~~~~p~~-~~~~~~L~laGd~~~~ 300 (368)
++.+++++.|++. +|++++ .++...+. +|.++..+.+ | ....||.. .|+++||||||+++++
T Consensus 392 ~~~~~vl~~l~~~~~P~~~~-~i~~~~~~-tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~p 469 (501)
T 4dgk_A 392 KLRDRIFAYLEQHYMPGLRS-QLVTHRMF-TPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHP 469 (501)
T ss_dssp HHHHHHHHHHHHHTCTTHHH-HEEEEEEE-CTTTTC------------------------------CCTTEEECCCH---
T ss_pred HHHHHHHHHHHHhhCCChHH-ceEEEEEC-CHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCC
Confidence 6788899999875 599875 56655554 4444332211 1 11245644 4789999999999976
Q ss_pred CCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 301 RHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 301 ~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
| +++.||+.||+.||+.|++++..
T Consensus 470 G---~Gv~ga~~SG~~aA~~il~dL~g 493 (501)
T 4dgk_A 470 G---AGIPGVIGSAKATAGLMLEDLIG 493 (501)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHC-
T ss_pred c---ccHHHHHHHHHHHHHHHHHHhcC
Confidence 4 57899999999999999999864
No 9
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.91 E-value=9.9e-24 Score=205.22 Aligned_cols=291 Identities=15% Similarity=0.205 Sum_probs=202.7
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH----------hhc-----------CCC
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAH-----------QKN 74 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~----------~~~-----------~~~ 74 (368)
..+++|+.+|+++ .++.+..+.++.|++.+.++.+++++|+...+..+..+. ... ...
T Consensus 146 ~~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (470)
T 3i6d_A 146 TKDDQSLGEFFRR-RVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQ 224 (470)
T ss_dssp SSSCCBHHHHHHH-HSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-----------------------------
T ss_pred CCCCcCHHHHHHH-hcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCC
Confidence 3578999999998 578888999999999999999999999876654332110 000 001
Q ss_pred cceeeecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhcc
Q 017660 75 FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSI 153 (368)
Q Consensus 75 ~~~~~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~~~~ 153 (368)
....+++||+ ..|+++|++.+.+ ++|+++++|++|..++ +++ .|++. |++++||+||+|+|++++.+++.++
T Consensus 225 ~~~~~~~~g~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~- 297 (470)
T 3i6d_A 225 GQFQTLSTGL-QTLVEEIEKQLKL--TKVYKGTKVTKLSHSG--SCY-SLELDNGVTLDADSVIVTAPHKAAAGMLSEL- 297 (470)
T ss_dssp --EEEETTCT-HHHHHHHHHTCCS--EEEECSCCEEEEEECS--SSE-EEEESSSCEEEESEEEECSCHHHHHHHTTTS-
T ss_pred ceEEEeCChH-HHHHHHHHHhcCC--CEEEeCCceEEEEEcC--CeE-EEEECCCCEEECCEEEECCCHHHHHHHcCCc-
Confidence 2345678996 5799999887754 7999999999999877 445 46665 6689999999999999999988764
Q ss_pred ccCchhHHhhhccCccceEEEEEEecCCCCCCCC--CceeecCCCCcc--ceeeeccccccccCCCCCeEEEEEee--cC
Q 017660 154 LCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV--SNACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFY--HA 227 (368)
Q Consensus 154 l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~~~~--~~~~d~s~~~~~~~~~~~~v~~~~~~--~~ 227 (368)
+..+.+..+.+.++.++.+.++++++.... ...+........ ...++ ++..+...+++..++.+.+. ..
T Consensus 298 ----~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~ 372 (470)
T 3i6d_A 298 ----PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGD 372 (470)
T ss_dssp ----TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSC
T ss_pred ----hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCC
Confidence 224577888888999999999998774321 111221111110 01122 21122223234455444332 12
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCC----CCCCCCCCCceEEeccccccCCC
Q 017660 228 NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHG 303 (368)
Q Consensus 228 ~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~----~p~~~~~~~~L~laGd~~~~~~~ 303 (368)
..+.+++++++++.++++|.++||... ++....+.+|+++++.+.+|.... ++...++.+||||||+++. +
T Consensus 373 ~~~~~~~~~~~~~~~~~~l~~~~g~~~--~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~-g-- 447 (470)
T 3i6d_A 373 ESIVDLSDNDIINIVLEDLKKVMNING--EPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASFE-G-- 447 (470)
T ss_dssp CGGGTSCHHHHHHHHHHHHGGGSCCCS--CCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTTS-C--
T ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCC--CceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecCC-C--
Confidence 335578899999999999999998643 566677888999988888886421 1222245689999999885 2
Q ss_pred CccchHHhHHHHHHHHHHHHHh
Q 017660 304 SWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 304 ~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.++++|+.||+.+|++|++.+
T Consensus 448 -~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 448 -VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp -CSHHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHHh
Confidence 369999999999999999876
No 10
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.90 E-value=2e-23 Score=203.69 Aligned_cols=291 Identities=13% Similarity=0.092 Sum_probs=202.7
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH----------hhcC-------------
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII----------LAHQ------------- 72 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~----------~~~~------------- 72 (368)
..+++|+.+|+++ ++++++.+.+++|++.+.++.+++++|+...+..+..+. ....
T Consensus 144 ~~~~~s~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 222 (475)
T 3lov_A 144 PEQDIPLGEYLRP-RLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTI 222 (475)
T ss_dssp CSSCCBHHHHHHH-HHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC------------
T ss_pred CCCCcCHHHHHHH-HhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccc
Confidence 5688999999998 578899999999999999999999999865444332210 0000
Q ss_pred -CCcceeeecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhh
Q 017660 73 -KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKN 151 (368)
Q Consensus 73 -~~~~~~~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~ 151 (368)
....+.+++||+ ..|+++|++.+.+ ++|+++++|++|..++ +++ .|++.+++++||+||+|+|++++.+|+++
T Consensus 223 ~~~~~~~~~~~G~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~ad~vV~a~p~~~~~~ll~~ 296 (475)
T 3lov_A 223 KATGQFLSLETGL-ESLIERLEEVLER--SEIRLETPLLAISRED--GRY-RLKTDHGPEYADYVLLTIPHPQVVQLLPD 296 (475)
T ss_dssp --CCSEEEETTCH-HHHHHHHHHHCSS--CEEESSCCCCEEEEET--TEE-EEECTTCCEEESEEEECSCHHHHHHHCTT
T ss_pred cCCCcEEeeCChH-HHHHHHHHhhccC--CEEEcCCeeeEEEEeC--CEE-EEEECCCeEECCEEEECCCHHHHHHHcCc
Confidence 123445678996 5799999887765 7999999999999887 555 46666448999999999999999999876
Q ss_pred ccccCchhHHhhhccCccceEEEEEEecCCCCCCCC-CceeecCCCCcc--ceeeeccccccccCCCCCeEEEEEee--c
Q 017660 152 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNV-SNACSGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFY--H 226 (368)
Q Consensus 152 ~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~-~~~~~~~~~~~~--~~~~d~s~~~~~~~~~~~~v~~~~~~--~ 226 (368)
.. . +.+..+.+.++.++.+.|++++..+.. ...+........ ...++ ++..+... ++..++...+. .
T Consensus 297 ~~---~---~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~-s~~~~~~~-p~~~~l~~~~~~~~ 368 (475)
T 3lov_A 297 AH---L---PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAI-DQKWNHSA-PDHTVLRAFVGRPG 368 (475)
T ss_dssp SC---C---HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEH-HHHCTTTC-TTEEEEEEEECBTT
T ss_pred cC---H---HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEE-cccCCCCC-CCcEEEEEEeCCCC
Confidence 42 1 567788888999999999988722211 112222111110 11122 21122222 22334333222 1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCC----CCCCCCCCCceEEeccccccCC
Q 017660 227 ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRH 302 (368)
Q Consensus 227 ~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~----~p~~~~~~~~L~laGd~~~~~~ 302 (368)
...+.+.+++++++.++++|.++||... ++....+.+|+++++.+.+|+... ++...++.+||||||+++..
T Consensus 369 ~~~~~~~~~e~~~~~~~~~L~~~~g~~~--~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g-- 444 (475)
T 3lov_A 369 NDHLVHESDEVLQQAVLQDLEKICGRTL--EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAYDG-- 444 (475)
T ss_dssp BCGGGGSCHHHHHHHHHHHHHHHHSSCC--CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTTSC--
T ss_pred CCcccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCCCC--
Confidence 2335567899999999999999998643 566777888999988888886321 12222456899999999852
Q ss_pred CCccchHHhHHHHHHHHHHHHHhCC
Q 017660 303 GSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 303 ~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
.+|++|+.||+.+|++|++.++.
T Consensus 445 --~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 445 --VGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp --SSHHHHHHHHHHHHHHHHHTC--
T ss_pred --CCHHHHHHHHHHHHHHHHHHhhc
Confidence 46999999999999999998874
No 11
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.89 E-value=6.2e-23 Score=201.74 Aligned_cols=295 Identities=13% Similarity=0.126 Sum_probs=197.1
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH--------------hhcC----------
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--------------LAHQ---------- 72 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--------------~~~~---------- 72 (368)
.+++|+.+|+++ .+++++++.+++|++.+.++.+++++|+..++..+.... +...
T Consensus 147 ~~~~s~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 225 (504)
T 1sez_A 147 DSHESVSGFFQR-HFGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKT 225 (504)
T ss_dssp -CCCBHHHHHHH-HHCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CC
T ss_pred CCCccHHHHHHH-HcCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccch
Confidence 467999999998 488999999999999999999999999876543332210 0000
Q ss_pred -----CCcceeeecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCce----EEEEEEC---C---eEEecCEEE
Q 017660 73 -----KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCC----ISDVVCG---K---ETYSAGAVV 137 (368)
Q Consensus 73 -----~~~~~~~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~----v~~v~~~---g---~~~~ad~VV 137 (368)
......+++||+ +.|+++|++.+.+ ++|++|++|++|..+++ +. ++.|++. | ++++||+||
T Consensus 226 ~~~~~~~~~~~~~~GG~-~~l~~~l~~~l~~--~~i~~~~~V~~I~~~~~-~~~~~~~~~v~~~~~~g~~~~~~~ad~VI 301 (504)
T 1sez_A 226 SANKKRQRGSFSFLGGM-QTLTDAICKDLRE--DELRLNSRVLELSCSCT-EDSAIDSWSIISASPHKRQSEEESFDAVI 301 (504)
T ss_dssp CSCCSTTCSCBEETTCT-HHHHHHHHTTSCT--TTEETTCCEEEEEEECS-SSSSSCEEEEEEBCSSSSCBCCCEESEEE
T ss_pred hhccccCCceEeeCcHH-HHHHHHHHhhccc--ceEEcCCeEEEEEecCC-CCcccceEEEEEcCCCCccceeEECCEEE
Confidence 011245678996 5799999865421 79999999999998774 31 1345553 4 578999999
Q ss_pred EeeChhhHHHhhhh---ccccCchhHHhhhccCccceEEEEEEecCCCCCCC--CCceeecCCC-----Cccceeeeccc
Q 017660 138 LAVGISTLQELIKN---SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN--VSNACSGFGD-----SLAWTFFDLNK 207 (368)
Q Consensus 138 ~a~p~~~l~~ll~~---~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~d~s~ 207 (368)
+|+|+..+.+++.. ..++ +. .+..+.+.++.++++.|+++++... .+..+..... .....+++ +.
T Consensus 302 ~a~p~~~l~~ll~~~~~~~~~-~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~ 376 (504)
T 1sez_A 302 MTAPLCDVKSMKIAKRGNPFL-LN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SM 376 (504)
T ss_dssp ECSCHHHHHTSEEESSSSBCC-CT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HH
T ss_pred ECCCHHHHHHHhhcccCCccc-HH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-cc
Confidence 99999999998742 1121 11 2556677788899999998765321 1222211110 00011121 22
Q ss_pred cccccCCCCCeEEEEEee--cCCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCC---
Q 017660 208 IYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMM--- 282 (368)
Q Consensus 208 ~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p--- 282 (368)
..+...+++..++..... .+..|..++++++++.++++|++++|... ++....+.+|+.+++.+.+|.....+
T Consensus 377 ~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~ 454 (504)
T 1sez_A 377 MFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEG--EPTYVNHLYWSKAFPLYGHNYDSVLDAID 454 (504)
T ss_dssp HCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCS--CCSSEEEEEEEEEEECCCTTHHHHHHHHH
T ss_pred ccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEeECCCCCCccCcCHHHHHHHHH
Confidence 223333233444433222 12346678899999999999999998643 45666777898888888887532111
Q ss_pred CCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 283 RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 283 ~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
...++++||||||++++ + .++++|+.||++||++|++.++.
T Consensus 455 ~~~~~~~~l~~aG~~~~---g-~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 455 KMEKNLPGLFYAGNHRG---G-LSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp HHHHHSTTEEECCSSSS---C-SSHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHhCCCEEEEeecCC---C-CCHHHHHHHHHHHHHHHHHHHhh
Confidence 12246789999999985 2 47999999999999999999874
No 12
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.88 E-value=1.5e-22 Score=197.52 Aligned_cols=298 Identities=11% Similarity=0.093 Sum_probs=185.4
Q ss_pred ccCccHHH--HHHHcCC--CHHHHHHHHHHHHHh-hhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHH
Q 017660 17 YDSITARE--LFKQFGC--SERLYRNVIGPLVQV-GLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEP 91 (368)
Q Consensus 17 ld~~S~~d--~l~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~ 91 (368)
.+++|+.+ ++.+... .....+.++++++.. .++.+++..|+..+... ..+. .......+....||+ ..|+++
T Consensus 135 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-~~~~~~~~~~~~gG~-~~l~~~ 211 (472)
T 1b37_A 135 RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFS-DFGDDVYFVADQRGY-EAVVYY 211 (472)
T ss_dssp TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHH-HHCSEEEEECCTTCT-THHHHH
T ss_pred chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-cccc-ccCCceeeeecCCcH-HHHHHH
Confidence 46677764 6654321 122234566665532 24556666664322110 1110 111111122236896 579999
Q ss_pred HHHHHHHc--------CCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhh--hccccCchhH
Q 017660 92 WMDSMRTR--------GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIK--NSILCNREEF 160 (368)
Q Consensus 92 l~~~l~~~--------G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~--~~~l~~~~~~ 160 (368)
|++.+.+. |++|+++++|++|..++ ++|+ |++. |++++||+||+|+|+..+.+++. .+.++ ....
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~ 287 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKV 287 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHH
Confidence 99888765 78999999999999877 5565 6665 66899999999999999987542 23342 4456
Q ss_pred HhhhccCccceEEEEEEecCCCCCCCCCceee--cC-CCCccceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCH
Q 017660 161 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACS--GF-GDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKD 235 (368)
Q Consensus 161 ~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~--~~-~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~ 235 (368)
+++..+.+.+..++.+.|++++|...+...+. .. +..... .+.. ..+. . ++++++...+.. +..|..+++
T Consensus 288 ~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~-~-p~~~~l~~~~~~~~a~~~~~~~~ 362 (472)
T 1b37_A 288 RAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYG-VWQE--FEKQ-Y-PDANVLLVTVTDEESRRIEQQSD 362 (472)
T ss_dssp HHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSC-EEEE--CTTT-S-TTCCEEEEEEEHHHHHHHHTSCH
T ss_pred HHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccce-eeec--ccCC-C-CCCCEEEEEechHHHHHHHhCCH
Confidence 78888888888899999999887432211111 11 111111 1110 1111 1 234444333321 123556789
Q ss_pred HHHHHHHHHHHhhhccCCCCCceeeeEEeecC------CCccccCCCCcC-CCCCCCCCCCceEEeccccccCCCCccch
Q 017660 236 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFP------KSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQE 308 (368)
Q Consensus 236 ~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~------~~~~~~~pg~~~-~~p~~~~~~~~L~laGd~~~~~~~~~~~e 308 (368)
+++.+.++++|+++||+....+++...+.+|. .++..+.||... .++...+|++||||||+++++.++ ++|+
T Consensus 363 ~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~-g~v~ 441 (472)
T 1b37_A 363 EQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYN-GYVH 441 (472)
T ss_dssp HHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTT-TSHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCC-Cchh
Confidence 99999999999999988642245555555662 223333445431 123345789999999999987666 7999
Q ss_pred HHhHHHHHHHHHHHHHhCC
Q 017660 309 RSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 309 gA~~Sg~~aA~~Il~~~~~ 327 (368)
||+.||++||++|++.++.
T Consensus 442 GA~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 442 GAYLSGIDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998864
No 13
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.85 E-value=4.4e-20 Score=172.45 Aligned_cols=228 Identities=10% Similarity=0.080 Sum_probs=160.2
Q ss_pred eecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhc--ccc
Q 017660 79 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNS--ILC 155 (368)
Q Consensus 79 ~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~~~--~l~ 155 (368)
...+|+ ..+++.|++.+ |++|+++++|++|..++ ++++ |.++ |++++||.||+|+|++++.+|+++. .+
T Consensus 106 ~~~~g~-~~l~~~l~~~~---g~~i~~~~~V~~i~~~~--~~~~-v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l- 177 (342)
T 3qj4_A 106 VAPQGI-SSIIKHYLKES---GAEVYFRHRVTQINLRD--DKWE-VSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI- 177 (342)
T ss_dssp ECTTCT-THHHHHHHHHH---TCEEESSCCEEEEEECS--SSEE-EEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS-
T ss_pred ecCCCH-HHHHHHHHHhc---CCEEEeCCEEEEEEEcC--CEEE-EEECCCCEEEcCEEEECCCHHHHHHHhccccccc-
Confidence 346786 57888887665 89999999999999876 4454 6665 6678999999999999999988642 23
Q ss_pred CchhHHhhhccCccceEEEEEEecCCCCCCCCCceeecCC-CCccceeeeccccccccCCCCCeEEEEEeec--CCCCCC
Q 017660 156 NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG-DSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMP 232 (368)
Q Consensus 156 ~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~--~~~~~~ 232 (368)
++...+.+..+.+.++.++.+.|+++++.+.+...+...+ ....|..++.+ ......++++.++.+.... +.++.+
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-k~~r~~~~~~~~~v~~~~~~~~~~~~~ 256 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNK-KRNIESSEIGPSLVIHTTVPFGVTYLE 256 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHH-HTTCCCC-CCCEEEEEECHHHHHHTTT
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEcccc-CCCCCCCCCCceEEEECCHHHHHHhhc
Confidence 2345678899999999999999998755444543332222 22456434333 2211111233333332221 234667
Q ss_pred CCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCCC--CCCCceEEeccccccCCCCccchHH
Q 017660 233 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWSQERS 310 (368)
Q Consensus 233 ~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~~--~~~~~L~laGd~~~~~~~~~~~egA 310 (368)
.+++++++.++++|.+++|... ++++..+.+|+++++.+... .++... ...++|++||||+.. .++|+|
T Consensus 257 ~~~~~~~~~~~~~l~~~~g~~~--~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~~g----~~v~~a 327 (342)
T 3qj4_A 257 HSIEDVQELVFQQLENILPGLP--QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGFTQ----SNFDGC 327 (342)
T ss_dssp SCHHHHHHHHHHHHHHHSCSCC--CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGGSC----SSHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCC--CCceeeeccccccccccccC---CCcceeEecCCccEEEEccccCC----CCccHH
Confidence 8999999999999999998554 56778889999998876441 234332 366899999999953 589999
Q ss_pred hHHHHHHHHHHHHH
Q 017660 311 YVTGLEAANRVVDY 324 (368)
Q Consensus 311 ~~Sg~~aA~~Il~~ 324 (368)
+.||+.||++|++.
T Consensus 328 i~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 328 ITSALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999864
No 14
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.83 E-value=2.2e-20 Score=183.73 Aligned_cols=296 Identities=12% Similarity=0.056 Sum_probs=194.3
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHH---------HHHHHhhcCC-----Ccceee-e
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGI---------LYFIILAHQK-----NFDLVW-C 80 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~---------l~~~~~~~~~-----~~~~~~-~ 80 (368)
..+..|+.+|+.+ .+++.+++.++.|++...++.+++++++.++... ....+..... .....+ +
T Consensus 139 ~~~~~s~~~~~~~-~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (513)
T 4gde_A 139 NTKPKTFDEWIVR-MMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPA 217 (513)
T ss_dssp CSCCCSHHHHHHH-HHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEES
T ss_pred cccccCHHHHHHH-hhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecc
Confidence 3467899999997 6789999999999999999999999988654221 1111111111 112223 4
Q ss_pred cCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhH
Q 017660 81 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 160 (368)
Q Consensus 81 ~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~ 160 (368)
+||+ ..|+++|++.|++.|++|+++++|++|..++ +++ +..+|+++.||+||+|+|++.+.+++.+. +..
T Consensus 218 ~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~~~-----~~~ 287 (513)
T 4gde_A 218 RGGT-GGIWIAVANTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLAEAMNDQ-----ELV 287 (513)
T ss_dssp SSHH-HHHHHHHHHTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHHHHTTCH-----HHH
T ss_pred cCCH-HHHHHHHHHHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHHHhcCch-----hhH
Confidence 7996 5799999999999999999999999999876 544 33458899999999999999999988753 223
Q ss_pred HhhhccCccceEEEEEEecCCCCCCC-CCceeecCCCCc-cceeeeccccccccCCC---------------------C-
Q 017660 161 LKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGDSL-AWTFFDLNKIYDEHKDD---------------------S- 216 (368)
Q Consensus 161 ~~i~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~-~~~~~d~s~~~~~~~~~---------------------~- 216 (368)
.....+.+.++.++.+.+++...... +...++..+... ...+...++..+...++ +
T Consensus 288 ~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 367 (513)
T 4gde_A 288 GLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKE 367 (513)
T ss_dssp HHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEEC
T ss_pred hhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCc
Confidence 45567788888888888876532111 111111111110 00011111111111100 1
Q ss_pred CeEEEEEe-ecCCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCC----CCCCCCCCCce
Q 017660 217 ATVIQADF-YHANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNL 291 (368)
Q Consensus 217 ~~v~~~~~-~~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~----~p~~~~~~~~L 291 (368)
+.+..... ...+.+.+++++++++.+++.|.++.+-....+++...+.+|++++|.|..|+... ++... .+||
T Consensus 368 ~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~--~~~l 445 (513)
T 4gde_A 368 GPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQ--DKDI 445 (513)
T ss_dssp CCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH--HTTE
T ss_pred ceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHh--hcCc
Confidence 11111111 12234556889999999999999998654444688888999999999998886432 11111 2699
Q ss_pred EEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 292 FMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 292 ~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
|++|-+-.-.|..+.|++|+.+|++||+.|+.-
T Consensus 446 ~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~g 478 (513)
T 4gde_A 446 WSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVNG 478 (513)
T ss_dssp EECSTTTTCCGGGCSHHHHHHHHHHHHHHHHHC
T ss_pred EEecCCcccCcCCCCHHHHHHHHHHHHHHHHcC
Confidence 999954322232247999999999999999963
No 15
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.83 E-value=1.8e-18 Score=166.51 Aligned_cols=276 Identities=13% Similarity=0.083 Sum_probs=181.3
Q ss_pred hhccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH------hhcCCCcceeeecCCcchhh
Q 017660 15 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII------LAHQKNFDLVWCRGTLREKI 88 (368)
Q Consensus 15 ~~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~------~~~~~~~~~~~~~GG~~~~L 88 (368)
..+| +|+.+|+++.+.++.. ..++.+++...++.+++++|+..++..+.... +.. ... .+.+|+ ..+
T Consensus 137 ~~~d-~s~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~g~-~~l 209 (431)
T 3k7m_X 137 EDLD-IPLNEYVDKLDLPPVS-RQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS---LDE-VFSNGS-ADL 209 (431)
T ss_dssp GGGC-SBHHHHHHHHTCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT---CCE-EETTCT-HHH
T ss_pred hhhc-CCHHHHHHhcCCCHHH-HHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc---hhh-hcCCcH-HHH
Confidence 4577 9999999988777764 45778888888999999999988776554320 011 011 457786 457
Q ss_pred hHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccC
Q 017660 89 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 167 (368)
Q Consensus 89 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~ 167 (368)
++.+. ++.| +|+++++|++|..++ ++|+ |.+. |++++||+||+|+|++.+.++...+.++ ....+.+..+.
T Consensus 210 ~~~~~---~~~g-~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~ 281 (431)
T 3k7m_X 210 VDAMS---QEIP-EIRLQTVVTGIDQSG--DVVN-VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGH 281 (431)
T ss_dssp HHHHH---TTCS-CEESSCCEEEEECSS--SSEE-EEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCC
T ss_pred HHHHH---hhCC-ceEeCCEEEEEEEcC--CeEE-EEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCC
Confidence 77664 4456 999999999999876 4465 6665 6679999999999999998775444342 34456677777
Q ss_pred ccceEEEEEEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHh
Q 017660 168 SIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLS 247 (368)
Q Consensus 168 ~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~~~~l~ 247 (368)
+...+++.+.++++++ . +++........+++.... . .++.++.. +.....+...+ + +.+.+.|+
T Consensus 282 ~~~~~kv~~~~~~~~~---~---i~~~~d~~~~~~~~~~~~----~-~~~~~l~~-~~~g~~~~~~~-~---~~~~~~l~ 345 (431)
T 3k7m_X 282 GGQGLKILIHVRGAEA---G---IECVGDGIFPTLYDYCEV----S-ESERLLVA-FTDSGSFDPTD-I---GAVKDAVL 345 (431)
T ss_dssp CCCEEEEEEEEESCCT---T---EEEEBSSSSSEEEEEEEC----S-SSEEEEEE-EEETTTCCTTC-H---HHHHHHHH
T ss_pred CcceEEEEEEECCCCc---C---ceEcCCCCEEEEEeCcCC----C-CCCeEEEE-EeccccCCCCC-H---HHHHHHHH
Confidence 7778899999988752 1 222221211223433211 0 12333322 33333333333 2 24567788
Q ss_pred hhccCCCCCceeeeEEeecCCC------ccccCCCCc-CCCCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHH
Q 017660 248 KCIKDFSTATVMDHKIRRFPKS------LTHFFPGSY-KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANR 320 (368)
Q Consensus 248 ~~~p~~~~~~i~~~~~~~~~~~------~~~~~pg~~-~~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~ 320 (368)
+++|+.. ++.....+|... +..+.||.. ..++....|.++|||||+.++..++ ++|+||+.||.+||++
T Consensus 346 ~~~~~~~---~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~-g~~~GA~~sg~raa~~ 421 (431)
T 3k7m_X 346 YYLPEVE---VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFP-GYIEGALETAECAVNA 421 (431)
T ss_dssp HHCTTCE---EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHH
T ss_pred HhcCCCC---ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCC-eEehHHHHHHHHHHHH
Confidence 8888653 555555667432 333455653 2345555788999999999987777 7999999999999999
Q ss_pred HHHHh
Q 017660 321 VVDYL 325 (368)
Q Consensus 321 Il~~~ 325 (368)
|+...
T Consensus 422 i~~~~ 426 (431)
T 3k7m_X 422 ILHSH 426 (431)
T ss_dssp HHHC-
T ss_pred HHhhh
Confidence 99753
No 16
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.83 E-value=2.1e-20 Score=182.72 Aligned_cols=293 Identities=12% Similarity=0.036 Sum_probs=195.5
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHH---------HHHHHHHhhcC-----CCcceeeec-
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATL---------GILYFIILAHQ-----KNFDLVWCR- 81 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~---------~~l~~~~~~~~-----~~~~~~~~~- 81 (368)
.+++|+.+|+.+. +++++++.++.|++...|+.+++++|+.++. ..+...+.... ....+.||.
T Consensus 134 ~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~ 212 (484)
T 4dsg_A 134 EPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQR 212 (484)
T ss_dssp SCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESS
T ss_pred CCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecC
Confidence 5789999999984 8899999999999999999999999986422 22222221111 112334554
Q ss_pred CCcchhhhHHHHHHHHHcCCEEecc--ceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhc--cccCc
Q 017660 82 GTLREKIFEPWMDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNS--ILCNR 157 (368)
Q Consensus 82 GG~~~~L~~~l~~~l~~~G~~i~~~--t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~--~l~~~ 157 (368)
||+ ..|+++|++.+.+. +|+++ ++|++|..++ ++|+ ..+|+++.||+||+|+|++.+.+++.+. .+ ++
T Consensus 213 gG~-~~l~~~la~~l~~~--~i~~~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~-~~ 284 (484)
T 4dsg_A 213 GGT-GIIYQAIKEKLPSE--KLTFNSGFQAIAIDADA--KTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKG-YD 284 (484)
T ss_dssp SCT-HHHHHHHHHHSCGG--GEEECGGGCEEEEETTT--TEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTT-GG
T ss_pred CCH-HHHHHHHHhhhhhC--eEEECCCceeEEEEecC--CEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCC-CH
Confidence 896 57999999888652 89999 5699999876 5442 2347789999999999999999998651 12 13
Q ss_pred hhHHhhhccCccceEEEEEEecCCCCCC-CCCceeecCCCCcc-ceeeeccccccccCCCCCeEEEEEeecCCCCCCCCH
Q 017660 158 EEFLKVLNLASIDVVSVKLWFDKKVTVP-NVSNACSGFGDSLA-WTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKD 235 (368)
Q Consensus 158 ~~~~~i~~l~~~~~~~v~l~~~~~~~~~-~~~~~~~~~~~~~~-~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 235 (368)
...+.+..+.+.++.++.+.++++.... .+.+.++-.+.... ..+...++..+...+++.+++.+.+... ...+.++
T Consensus 285 ~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~d 363 (484)
T 4dsg_A 285 EWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVNH 363 (484)
T ss_dssp GHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCCT
T ss_pred HHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC-cCCcCCH
Confidence 4556778889999999999998864211 12222221221110 1112223333333334445554444322 3345788
Q ss_pred HHHHHHHHHHHhhhccCCCC-CceeeeEEeecCCCccccCCCCcCC----CCCCCCCCCceEEeccccccCCCCccchHH
Q 017660 236 DQVVAKAVSYLSKCIKDFST-ATVMDHKIRRFPKSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERS 310 (368)
Q Consensus 236 ~e~~~~~~~~l~~~~p~~~~-~~i~~~~~~~~~~~~~~~~pg~~~~----~p~~~~~~~~L~laGd~~~~~~~~~~~egA 310 (368)
+++++.++++|.++. .+.. ..+...++.+|++++|.|.+|.... +.... .. ||+++|.+-.-.|+...|++|
T Consensus 364 ~~l~~~a~~~L~~~~-~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~-~~-~l~~~Gr~g~~~y~v~~~d~~ 440 (484)
T 4dsg_A 364 STLIEDCIVGCLASN-LLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELM-SR-CIYSRGRFGAWRYEVGNQDHS 440 (484)
T ss_dssp TSHHHHHHHHHHHTT-SCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHH-HT-TEEECSTTTTCCGGGCSHHHH
T ss_pred HHHHHHHHHHHHHcC-CCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHH-hC-CcEeecCCcccccCCCChHHH
Confidence 999999999999984 3332 2355567788999999999886432 11111 23 999999865433432379999
Q ss_pred hHHHHHHHHHHH
Q 017660 311 YVTGLEAANRVV 322 (368)
Q Consensus 311 ~~Sg~~aA~~Il 322 (368)
+.||+.||+.|+
T Consensus 441 i~sg~~aa~~i~ 452 (484)
T 4dsg_A 441 FMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 999999999996
No 17
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.82 E-value=1.1e-18 Score=171.14 Aligned_cols=288 Identities=14% Similarity=0.053 Sum_probs=176.0
Q ss_pred hhccCccHHHHHHHcC-CCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHHHH
Q 017660 15 RKYDSITARELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 93 (368)
Q Consensus 15 ~~ld~~S~~d~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~l~ 93 (368)
..+|++|+.+|+++.+ ++....+.+.+. +...... ..+....+.... .... ......+.||+ ..|+++|+
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~--~~~~--~~~~~~~~gG~-~~l~~~l~ 248 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDMIGDL-LNEDSGY---YVSFIESLKHDD--IFAY--EKRFDEIVDGM-DKLPTAMY 248 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHHHHHH-TTCGGGT---TSBHHHHHHHHH--HHTT--CCCEEEETTCT-THHHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHHHHHh-cCcccch---hHHHHHHHHHHh--cccc--CcceEEeCCcH-HHHHHHHH
Confidence 4578899999999865 466655433221 1100000 011111111111 1111 22334668996 57999999
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce----EEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCc
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 168 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~----~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~ 168 (368)
+.+.. +|+++++|++|..++ ++|. |++. |+ +++||+||+|+|+..+.++...+.++ ....++++.+.+
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~--~~v~-v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~ 321 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQND--QKVT-VVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHY 321 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECS--SCEE-EEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCE
T ss_pred Hhccc---ccccCCEEEEEEECC--CeEE-EEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCC
Confidence 88764 899999999999876 5554 5543 43 48999999999999887765444443 455678889999
Q ss_pred cceEEEEEEecCCCCCCCCC-ceeecCCCCccceeeeccccccccCCCCCeEEEEEee--cCCCCCCCCHHHHHHHHHHH
Q 017660 169 IDVVSVKLWFDKKVTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDDQVVAKAVSY 245 (368)
Q Consensus 169 ~~~~~v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~e~~~~~~~~ 245 (368)
.+..++.+.|++++|..... ..+...+.+..+.+++ +.. .+ .+..++..... .+..|..++++++.+.++++
T Consensus 322 ~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~~---~p-~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~ 396 (498)
T 2iid_A 322 RSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-NHN---FT-NGVGVIIAYGIGDDANFFQALDFKDCADIVFND 396 (498)
T ss_dssp ECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-SSC---CT-TSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHH
T ss_pred cceeEEEEEeCCCCccCCCccCCcccCCCCcceEEEC-CCC---CC-CCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHH
Confidence 88999999999988743211 0110011122222222 111 11 23344433222 22346678899999999999
Q ss_pred HhhhccCCCCC---ceeeeEEeecCCCccccCCCCcCC---------CCCCCCCCCceEEeccccccCCCCccchHHhHH
Q 017660 246 LSKCIKDFSTA---TVMDHKIRRFPKSLTHFFPGSYKY---------MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVT 313 (368)
Q Consensus 246 l~~~~p~~~~~---~i~~~~~~~~~~~~~~~~pg~~~~---------~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~S 313 (368)
|+++++-..+. ......+.+|... .|..|++.. ++...++.+||||||++++..+ ++|+||+.|
T Consensus 397 L~~~~g~~~~~~~~~~~~~~~~~W~~~--p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~~--g~~~GAi~S 472 (498)
T 2iid_A 397 LSLIHQLPKKDIQSFCYPSVIQKWSLD--KYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQAH--GWIDSTIKS 472 (498)
T ss_dssp HHHHHTCCHHHHHHHEEEEEEEEGGGC--TTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSSS--SCHHHHHHH
T ss_pred HHHHcCCChhhhhhhcCccEEEecCCC--CCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccCC--cCHHHHHHH
Confidence 99999622110 0122345567543 223343321 1122357899999999997544 589999999
Q ss_pred HHHHHHHHHHHhCC
Q 017660 314 GLEAANRVVDYLGD 327 (368)
Q Consensus 314 g~~aA~~Il~~~~~ 327 (368)
|.+||++|++.++.
T Consensus 473 G~raA~~i~~~l~~ 486 (498)
T 2iid_A 473 GLRAARDVNLASEN 486 (498)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999863
No 18
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.81 E-value=7.4e-19 Score=177.94 Aligned_cols=226 Identities=18% Similarity=0.215 Sum_probs=152.0
Q ss_pred eecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-C------CeEEecCEEEEeeChhhHHHhh--
Q 017660 79 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI-- 149 (368)
Q Consensus 79 ~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~------g~~~~ad~VV~a~p~~~l~~ll-- 149 (368)
...||+ +.|+++|++ +.+|++|++|++|..++ ++|+ |++ + +++++||+||+|+|+..++++.
T Consensus 395 ~~~gG~-~~l~~~La~-----~l~I~l~~~V~~I~~~~--~~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~ 465 (662)
T 2z3y_A 395 TVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTA--SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 465 (662)
T ss_dssp EETTCT-THHHHHHTT-----TCEEETTEEEEEEEEET--TEEE-EEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred eecCcH-HHHHHHHHh-----cCceecCCeEEEEEECC--CcEE-EEEeecccCCCCeEEEeCEEEECCCHHHHhcccCc
Confidence 457896 579998874 56899999999999987 4454 443 2 3579999999999999998742
Q ss_pred --hhccccCchhHHhhhccCccceEEEEEEecCCCCCCCCCceeecC-CC-----CccceeeeccccccccCCCCCeEEE
Q 017660 150 --KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF-GD-----SLAWTFFDLNKIYDEHKDDSATVIQ 221 (368)
Q Consensus 150 --~~~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~d~s~~~~~~~~~~~~v~~ 221 (368)
..+.++ ....++++.+.+.+..++.+.|++++|... .. .++. .. ...+.+++.. +..++.
T Consensus 466 i~f~P~LP-~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~-~~-~~G~l~~~~~~~~~~~~~~~~~---------~~~vL~ 533 (662)
T 2z3y_A 466 VQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDPS-VN-LFGHVGSTTASRGELFLFWNLY---------KAPILL 533 (662)
T ss_dssp SEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCTT-CS-EEEECCSSSTTTTEEEEEECCS---------SSSEEE
T ss_pred eEEcCCCC-HHHHHHHHhCCccceeEEEEEcCcccccCC-CC-ceeeecCCCCCCCceeEEEeCC---------CCCEEE
Confidence 223342 345678889999999999999999998532 12 2221 10 1111122211 122333
Q ss_pred EEee--cCCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCC------ccccCCCCcCC-------------
Q 017660 222 ADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------------- 280 (368)
Q Consensus 222 ~~~~--~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~------~~~~~pg~~~~------------- 280 (368)
..+. .+..+..++++++++.++++|+++|+.....++....+.+|..+ +..+.||....
T Consensus 534 ~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~ 613 (662)
T 2z3y_A 534 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGP 613 (662)
T ss_dssp EEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC--
T ss_pred EEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCcccc
Confidence 2222 12335678999999999999999998643235667777788654 22233443210
Q ss_pred -CCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 281 -MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 281 -~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
+|...++.++|||||++++..++ ++|+||+.||++||++|++.++
T Consensus 614 ~~~~~~~~~grl~FAGe~ts~~~~-g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 614 SIPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp -------CCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccccCCCCcEEEEeccccCCCC-cCHHHHHHHHHHHHHHHHHHcc
Confidence 11123456899999999987677 7999999999999999999876
No 19
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.80 E-value=2.4e-18 Score=177.03 Aligned_cols=227 Identities=18% Similarity=0.199 Sum_probs=154.9
Q ss_pred eecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-C------CeEEecCEEEEeeChhhHHHhh--
Q 017660 79 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI-- 149 (368)
Q Consensus 79 ~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~------g~~~~ad~VV~a~p~~~l~~ll-- 149 (368)
...||+ +.|+++|++ +.+|++|++|++|..++ ++|. |++ + +++++||+||+|+|+.++++++
T Consensus 566 ~~~gG~-~~L~~aLa~-----~l~I~Lnt~V~~I~~~~--~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~ 636 (852)
T 2xag_A 566 TVRNGY-SCVPVALAE-----GLDIKLNTAVRQVRYTA--SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPA 636 (852)
T ss_dssp EETTCT-THHHHHHTT-----TCCEECSEEEEEEEEET--TEEE-EEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCS
T ss_pred EecCcH-HHHHHHHHh-----CCCEEeCCeEEEEEEcC--CcEE-EEEeecccCCCCeEEECCEEEECCCHHHHHhhhcc
Confidence 457997 579998875 45799999999999987 4454 443 2 3579999999999999998742
Q ss_pred --hhccccCchhHHhhhccCccceEEEEEEecCCCCCCCCCceeecCC------CCccceeeeccccccccCCCCCeEEE
Q 017660 150 --KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG------DSLAWTFFDLNKIYDEHKDDSATVIQ 221 (368)
Q Consensus 150 --~~~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~s~~~~~~~~~~~~v~~ 221 (368)
..+.++ ....++|..+.+.++.++.+.|++++|.. ... .+++. ....+.+++.. . .. ++.
T Consensus 637 I~F~P~LP-~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-~~~-~fG~l~~~~~~~~~l~~~~~~~------~--~p-vLl 704 (852)
T 2xag_A 637 VQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY------K--AP-ILL 704 (852)
T ss_dssp SEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCC-EEEECCSSSTTTTTTCEEEECS------S--SS-EEE
T ss_pred cccCCCCC-HHHHHHHHcCCccceEEEEEEcCCcccCC-CCC-eeeeeccccCCCCceEEEecCC------C--CC-EEE
Confidence 223342 33456788999989999999999998853 212 22211 11112233321 1 22 333
Q ss_pred EEee--cCCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCC------ccccCCCCcCC-------------
Q 017660 222 ADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------------- 280 (368)
Q Consensus 222 ~~~~--~~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~------~~~~~pg~~~~------------- 280 (368)
..+. .+..+..++++++++.++++|.++|+.....++....+.+|..+ +..+.||....
T Consensus 705 ~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~ 784 (852)
T 2xag_A 705 ALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGP 784 (852)
T ss_dssp EEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCC
T ss_pred EEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCcccccc
Confidence 2222 22335568899999999999999998643235667777788654 22334553211
Q ss_pred -CCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 281 -MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 281 -~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
+|....+.++|||||++++..++ ++|+||+.||.+||++|++.+..
T Consensus 785 ~~p~~~~~~grL~FAGE~Ts~~~~-gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 785 SIPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp SSTTCCCCCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccccCCCCcEEEEehhHhCCCC-cCHHHHHHHHHHHHHHHHHHhhC
Confidence 11223456899999999987677 79999999999999999999864
No 20
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.79 E-value=7.3e-19 Score=172.04 Aligned_cols=233 Identities=10% Similarity=0.102 Sum_probs=155.8
Q ss_pred ceeeecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C---eEEecCEEEEeeChhhHHHhhhh
Q 017660 76 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K---ETYSAGAVVLAVGISTLQELIKN 151 (368)
Q Consensus 76 ~~~~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g---~~~~ad~VV~a~p~~~l~~ll~~ 151 (368)
...+++||+ +.|+++|++.+.+ ++|++|++|++|..++ ++|+ |++. | ++++||+||+|+|+..+.+|..
T Consensus 230 ~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~- 302 (489)
T 2jae_A 230 MMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQN- 302 (489)
T ss_dssp SEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEE-
T ss_pred cEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCcc-
Confidence 345678996 5799999987753 7899999999999887 5565 5543 4 5799999999999998887765
Q ss_pred ccccCchhHHhhhccCccceEEEEEEecCCCCCCC-CCc-eeecCCCCccceeeeccccccccCCCCCeEEEEEeec--C
Q 017660 152 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSN-ACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--A 227 (368)
Q Consensus 152 ~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~-~~~-~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~--~ 227 (368)
.++ ....+.++.+.+.+..++++.|++++|... ... .+...+..... ++..+.. +..+.+.++...... +
T Consensus 303 -~l~-~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~-~~~~s~~---~~~~~~~l~~~~~~g~~~ 376 (489)
T 2jae_A 303 -NLP-GDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQ-IMFPYDH---YNSDRGVVVAYYSSGKRQ 376 (489)
T ss_dssp -CCC-HHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCE-EECCSSS---TTSSCEEEEEEEEETHHH
T ss_pred -CCC-HHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceE-EEeCCCC---CCCCCCEEEEEeeCCchh
Confidence 232 445677888889899999999998876322 110 01111112212 1222211 111233443222221 2
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhccC-CCCCceeeeEEeecCCCccccCCCCcCC---------------CCCCCCCCCce
Q 017660 228 NELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKSLTHFFPGSYKY---------------MMRGFTSFPNL 291 (368)
Q Consensus 228 ~~~~~~~~~e~~~~~~~~l~~~~p~-~~~~~i~~~~~~~~~~~~~~~~pg~~~~---------------~p~~~~~~~~L 291 (368)
..|..++++++++.+++.|++++|. +.. ++......+|.... +..|++.. ++...++.+||
T Consensus 377 ~~~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 453 (489)
T 2jae_A 377 EAFESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTK--YSESAWANWAGSGGSHGGAATPEYEKLLEPVDKI 453 (489)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGST--TTSCSSCEETTC-------CCHHHHHHTSCBTTE
T ss_pred hhhhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCC--CCCCcchhcccccCCCcccchhhHHHHhCCCCcE
Confidence 2366678999999999999999987 543 46665566675442 22232211 11224578999
Q ss_pred EEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 292 FMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 292 ~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
||||++++. ++ ++++||+.||.+||++|++.++
T Consensus 454 ~faG~~~~~-~~-~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 454 YFAGDHLSN-AI-AWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp EECSGGGBS-ST-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeEHHhcc-Cc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 999999963 44 6999999999999999998876
No 21
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.74 E-value=1.3e-17 Score=170.34 Aligned_cols=228 Identities=17% Similarity=0.176 Sum_probs=148.8
Q ss_pred eecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHh-h-hhcccc
Q 017660 79 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL-I-KNSILC 155 (368)
Q Consensus 79 ~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~l-l-~~~~l~ 155 (368)
+..+|+ ..|+++|++ |++|+++++|++|..++ ++|+ |++. |++++||+||+|+|+..+++. + ..+.++
T Consensus 528 ~~~~G~-~~l~~aLa~-----gl~I~l~t~V~~I~~~~--~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp 598 (776)
T 4gut_A 528 LLTPGY-SVIIEKLAE-----GLDIQLKSPVQCIDYSG--DEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLS 598 (776)
T ss_dssp ECTTCT-HHHHHHHHT-----TSCEESSCCEEEEECSS--SSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCCC
T ss_pred EECChH-HHHHHHHHh-----CCcEEcCCeeEEEEEcC--CEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCCC
Confidence 456785 468777753 77999999999999877 4465 6655 668999999999999998752 2 222342
Q ss_pred CchhHHhhhccCccceEEEEEEecCCCCCCC-CCceeecCCC------CccceeeeccccccccCCCCCeEEEEEeec--
Q 017660 156 NREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVIQADFYH-- 226 (368)
Q Consensus 156 ~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~------~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~-- 226 (368)
....+++..+.+.++.++.+.|++++|... ....+++... .....+++.+ +..++.++......
T Consensus 599 -~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~------p~g~~~vL~~~i~G~~ 671 (776)
T 4gut_A 599 -EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD------PQKKHSVLMSVIAGEA 671 (776)
T ss_dssp -HHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC------TTSCSCEEEEEECTHH
T ss_pred -HHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC------CCCCceEEEEEecchh
Confidence 445677888888888999999999988432 1111222211 1111122321 11123344333321
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCcc------ccCCCCcC-CCCCCCCC-CCceEEecccc
Q 017660 227 ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLT------HFFPGSYK-YMMRGFTS-FPNLFMAGDWI 298 (368)
Q Consensus 227 ~~~~~~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~------~~~pg~~~-~~p~~~~~-~~~L~laGd~~ 298 (368)
+..+.+++++++++.++++|.++||......++...+.+|..+.+ .+.||... ..+....+ .++|||||+++
T Consensus 672 a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~T 751 (776)
T 4gut_A 672 VASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEAT 751 (776)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGGG
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehhh
Confidence 233567899999999999999999864323566667777854421 11223211 01111234 47899999999
Q ss_pred ccCCCCccchHHhHHHHHHHHHHHH
Q 017660 299 TTRHGSWSQERSYVTGLEAANRVVD 323 (368)
Q Consensus 299 ~~~~~~~~~egA~~Sg~~aA~~Il~ 323 (368)
+..++ ++|+||+.||.+||++|++
T Consensus 752 s~~~~-gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 752 NRHFP-QTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp CSSSC-SSHHHHHHHHHHHHHHHHC
T ss_pred cCCCC-cCHHHHHHHHHHHHHHHHh
Confidence 98777 7999999999999999975
No 22
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.72 E-value=8.8e-17 Score=158.39 Aligned_cols=289 Identities=12% Similarity=0.108 Sum_probs=161.7
Q ss_pred ccCccHHHHHHHc------CCCHHHHHHHHHHHH---HhhhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchh
Q 017660 17 YDSITARELFKQF------GCSERLYRNVIGPLV---QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREK 87 (368)
Q Consensus 17 ld~~S~~d~l~~~------~~~~~~~~~~~~~~~---~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~ 87 (368)
.+++|+.+|+.+. .+++... .++..++ ...++.+++++|+..++ ....+. ..++.| + +.
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~~-~~~~~~~~~~~~~~g~~~~~~s~~~~~--------~~~~~~-~~~~~g-~-~~ 203 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQI-RYLPQLCRYLELWHGLDWKLLSAKDTY--------FGHQGR-NAFALN-Y-DS 203 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHHH-HHHHHHHGGGHHHHTBCTTTSBHHHHC--------CCCSSC-CEEESC-H-HH
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHHH-HHHHHHHHHHHHHhCCChHHCChHHHH--------hhccCc-chhhhC-H-HH
Confidence 4678999988752 1222211 1222222 22345667777765421 111111 235566 4 67
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHh----------hh-hcccc
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQEL----------IK-NSILC 155 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~l----------l~-~~~l~ 155 (368)
|+++|++.+. +++|++|++|++|..+++ +.| .|++. |++++||+||+|+|+..++.. +. .+.+
T Consensus 204 l~~~l~~~l~--~~~i~~~~~V~~I~~~~~-~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~L- 278 (516)
T 1rsg_A 204 VVQRIAQSFP--QNWLKLSCEVKSITREPS-KNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPL- 278 (516)
T ss_dssp HHHHHHTTSC--GGGEETTCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCC-
T ss_pred HHHHHHHhCC--CCEEEECCEEEEEEEcCC-CeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCC-
Confidence 9999987765 368999999999998632 444 46665 668999999999999998743 11 1233
Q ss_pred CchhHHhhhccCccceEEEEEEecCCCCCCCCCceeecCCC-C-------------------------------ccceee
Q 017660 156 NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD-S-------------------------------LAWTFF 203 (368)
Q Consensus 156 ~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~-~-------------------------------~~~~~~ 203 (368)
+....++++.+.+.+..++.+.|++++|..... .+.+... + ..|. +
T Consensus 279 p~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 356 (516)
T 1rsg_A 279 KPVIQDAFDKIHFGALGKVIFEFEECCWSNESS-KIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWS-Q 356 (516)
T ss_dssp CHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCS-EEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTS-S
T ss_pred CHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCC-cEEEeCCCCccchhhcccCcccchhhhccccccccccccccccc-C
Confidence 245567889999999999999999999854322 1211110 0 0010 0
Q ss_pred eccccccccCCCCCeEEEEEeecC--CCCCCC--CHHHHHHH---HHHHHhhhcc------CCCCC-------cee--ee
Q 017660 204 DLNKIYDEHKDDSATVIQADFYHA--NELMPL--KDDQVVAK---AVSYLSKCIK------DFSTA-------TVM--DH 261 (368)
Q Consensus 204 d~s~~~~~~~~~~~~v~~~~~~~~--~~~~~~--~~~e~~~~---~~~~l~~~~p------~~~~~-------~i~--~~ 261 (368)
. +....-+...+..++....... ..+..+ +++++.+. +++++.++|+ +.... .++ ..
T Consensus 357 ~-~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~ 435 (516)
T 1rsg_A 357 P-LFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNI 435 (516)
T ss_dssp C-EEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEE
T ss_pred c-eeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceE
Confidence 0 0000000001223332222211 112334 67777654 5566655553 33211 122 45
Q ss_pred EEeecCCCc------cccCCCCcCC--CCCC-CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 262 KIRRFPKSL------THFFPGSYKY--MMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 262 ~~~~~~~~~------~~~~pg~~~~--~p~~-~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
...+|..+. ..+.||.... .... ..+.++|||||++++..++ ++|+||+.||.+||++|++.++
T Consensus 436 ~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~-g~v~GA~~SG~raA~~i~~~~~ 508 (516)
T 1rsg_A 436 IVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGA-GCAYGAWESGRREATRISDLLK 508 (516)
T ss_dssp EECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTB-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCC-ccchhHHHHHHHHHHHHHHHhh
Confidence 556674431 1223343110 0001 1356899999999987677 7999999999999999998875
No 23
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.71 E-value=4e-17 Score=163.92 Aligned_cols=307 Identities=11% Similarity=0.028 Sum_probs=174.2
Q ss_pred hhccCccH---HHHHHHc-CCCHHHHHHHHHHHHHhhhc-CCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhh
Q 017660 15 RKYDSITA---RELFKQF-GCSERLYRNVIGPLVQVGLF-APAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIF 89 (368)
Q Consensus 15 ~~ld~~S~---~d~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~ 89 (368)
.++|++|+ .+|+++. .++ ... .++..+..+..+ .+....|...++... . ... ......+.||+ +.|+
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~~~-~~~~~~~~~~gg~~~~~~~S~le~L~~~---~-~~~-~~~~~~i~GG~-~~L~ 350 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-YYV-ELFGRFGFGTGGFKPLYNISLVEMMRLI---L-WDY-SNEYTLPVTEN-VEFI 350 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-HHH-HHHHHHCSSSSCCGGGTTBBHHHHHHHH---H-TTT-TCEECCSSSST-HHHH
T ss_pred HhhcccchhHHHHHHHhccccH-HHH-HHHHHHhhccCCCCCccchhHHHHHHHH---h-cCC-ccceeEECCcH-HHHH
Confidence 46677888 8877531 122 112 222221111112 233466766655443 1 211 22345568995 6799
Q ss_pred HHHHHHHHHcCCEEeccceee--eEEecCCCc------eEEEE-EEC-Ce--EEecCEEEEeeChhhHHHhh-----h--
Q 017660 90 EPWMDSMRTRGCEFLDGRRVT--DFIYDEERC------CISDV-VCG-KE--TYSAGAVVLAVGISTLQELI-----K-- 150 (368)
Q Consensus 90 ~~l~~~l~~~G~~i~~~t~V~--~I~~~~~~g------~v~~v-~~~-g~--~~~ad~VV~a~p~~~l~~ll-----~-- 150 (368)
++|++.+.. |++|+++++|+ +|..+++ + .|+ | ... |+ +++||+||+|+|+..+..++ .
T Consensus 351 ~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~-g~~~~~~~V~-V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~ 427 (721)
T 3ayj_A 351 RNLFLKAQN-VGAGKLVVQVRQERVANACH-SGTASARAQL-LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHA 427 (721)
T ss_dssp HHHHHHHHH-HTTTSEEEEEECEEEEEEEE-CSSSSCCEEE-EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCE
T ss_pred HHHHHhccc-CCceEeCCEEEeeeEEECCC-CCccccceEE-EEEecCCceEEEEcCEEEECCCHHHHhhcccccccccc
Confidence 999998753 68899999999 9998753 3 354 4 333 55 78999999999999986411 1
Q ss_pred --------------------hcc-ccC-------chhHHhhhccCccceEEEEEEe-----cCCCCCCCCCc-e-eecCC
Q 017660 151 --------------------NSI-LCN-------REEFLKVLNLASIDVVSVKLWF-----DKKVTVPNVSN-A-CSGFG 195 (368)
Q Consensus 151 --------------------~~~-l~~-------~~~~~~i~~l~~~~~~~v~l~~-----~~~~~~~~~~~-~-~~~~~ 195 (368)
.++ +-+ ....+++.++.+.+..|+.+.+ ++++|...... . ..-.+
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD 507 (721)
T 3ayj_A 428 ASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSD 507 (721)
T ss_dssp EEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEET
T ss_pred ccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecC
Confidence 111 101 2456788999999999999999 88988543111 0 11112
Q ss_pred CCccce-eeeccccccccCCCCCe-EEEEEeec--CCCC------CCCCH-------HHHHHHHHHHHh--hhccCCC--
Q 017660 196 DSLAWT-FFDLNKIYDEHKDDSAT-VIQADFYH--ANEL------MPLKD-------DQVVAKAVSYLS--KCIKDFS-- 254 (368)
Q Consensus 196 ~~~~~~-~~d~s~~~~~~~~~~~~-v~~~~~~~--~~~~------~~~~~-------~e~~~~~~~~l~--~~~p~~~-- 254 (368)
...... ++...+.. .+.+++.. ++..+... +..| ..+++ +++++.+++++. +++|+..
T Consensus 508 ~~~r~~~~~p~p~~~-d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~ 586 (721)
T 3ayj_A 508 SGLAASYVVPSPIVE-DGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNA 586 (721)
T ss_dssp TTTEEEEEEECSCC-----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSC
T ss_pred CCcceEEEeccCccc-ccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCcccccc
Confidence 122111 11100000 11112233 44332221 1122 22333 344899999999 8898754
Q ss_pred ---------C-CceeeeEEeecCCC-----ccccCCCCc-------CCC--CCCCCCCCceEEeccccccCCCCccchHH
Q 017660 255 ---------T-ATVMDHKIRRFPKS-----LTHFFPGSY-------KYM--MRGFTSFPNLFMAGDWITTRHGSWSQERS 310 (368)
Q Consensus 255 ---------~-~~i~~~~~~~~~~~-----~~~~~pg~~-------~~~--p~~~~~~~~L~laGd~~~~~~~~~~~egA 310 (368)
. ....+.....|... +..+.||.. .+. .....+.++||||||+++ .++ +++|||
T Consensus 587 ~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S-~~~-GWieGA 664 (721)
T 3ayj_A 587 QPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYS-HLG-GWLEGA 664 (721)
T ss_dssp EECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGS-SCT-TSHHHH
T ss_pred ccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhc-cCC-ceehHH
Confidence 1 00122344456322 112345541 111 111235689999999998 455 799999
Q ss_pred hHHHHHHHHHHHHHhCCCCcccccc
Q 017660 311 YVTGLEAANRVVDYLGDGSFSKIIP 335 (368)
Q Consensus 311 ~~Sg~~aA~~Il~~~~~~~~~~~~~ 335 (368)
+.||.+||..|...++.+.+.|..+
T Consensus 665 l~Sa~~Aa~~i~~~~~~~~~~~~~~ 689 (721)
T 3ayj_A 665 FMSALNAVAGLIVRANRGDVSALST 689 (721)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGBCT
T ss_pred HHHHHHHHHHHHHHhcCCCCcccCc
Confidence 9999999999999999866666544
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.67 E-value=1.9e-16 Score=151.94 Aligned_cols=276 Identities=13% Similarity=0.148 Sum_probs=160.5
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHH-HhhcCCCcceeeecCCcchhhhHHHHH
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-ILAHQKNFDLVWCRGTLREKIFEPWMD 94 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~-~~~~~~~~~~~~~~GG~~~~L~~~l~~ 94 (368)
+.+.+|+.+|+++.+.+ .+.+.+..|++...++ ++++.|+..++..+... ++....+. .....||+ +.++++|.+
T Consensus 139 ~~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~-~~l~~~l~~ 214 (424)
T 2b9w_A 139 EDLMLPFDEFLALNGCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGT-QAMFEHLNA 214 (424)
T ss_dssp GGGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCH-HHHHHHHHH
T ss_pred hhhccCHHHHHHhhCcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChH-HHHHHHHHH
Confidence 34579999999998775 4667777887765554 67889988765443221 11100111 12457885 679999986
Q ss_pred HHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccceEEE
Q 017660 95 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSV 174 (368)
Q Consensus 95 ~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~~~v 174 (368)
.+ +.+|+++++|++|..++ ++++ |++++++++||+||+|+|+..+.++++.. +..++.+..+.+.+.. +
T Consensus 215 ~l---~~~v~~~~~V~~i~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~ 283 (424)
T 2b9w_A 215 TL---EHPAERNVDITRITRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-V 283 (424)
T ss_dssp HS---SSCCBCSCCEEEEECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-E
T ss_pred hh---cceEEcCCEEEEEEEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-E
Confidence 65 46899999999999876 5565 77775569999999999999887665432 2233344555554432 2
Q ss_pred EEEecCCCCCCCCCceeecCC--C-CccceeeeccccccccCCCCCeEEEEEee-cCCCCCCCCHHHHHHHHHHHHhhhc
Q 017660 175 KLWFDKKVTVPNVSNACSGFG--D-SLAWTFFDLNKIYDEHKDDSATVIQADFY-HANELMPLKDDQVVAKAVSYLSKCI 250 (368)
Q Consensus 175 ~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~d~s~~~~~~~~~~~~v~~~~~~-~~~~~~~~~~~e~~~~~~~~l~~~~ 250 (368)
.+.+.+... . ...++... . ...+.+++.... ++.+..++..... ....+.+.+++++.+.+++.|.++.
T Consensus 284 ~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~ 356 (424)
T 2b9w_A 284 DACLVKEYP-T--ISGYVPDNMRPERLGHVMVYYHRW----ADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFG 356 (424)
T ss_dssp EEEEESSCC-S--SEEECGGGGSGGGTTSCCEEEECC----TTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTT
T ss_pred EEEEeccCC-c--ccccccCCCCCcCCCcceEEeeec----CCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcC
Confidence 223333321 1 11121110 0 111222222211 1112233322222 2234556778899999999999854
Q ss_pred cCCCCCceeeeEEeecCC----CccccCCCCcCCCCCCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHH
Q 017660 251 KDFSTATVMDHKIRRFPK----SLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 322 (368)
Q Consensus 251 p~~~~~~i~~~~~~~~~~----~~~~~~pg~~~~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il 322 (368)
+... +++.. ..|.. +...+..|... ++...++.+||||||+|+. + +.+|+|+.||+.||+.|+
T Consensus 357 ~~~~--~~~~~--~~w~~~p~~~~~~~~~G~~~-~~~~~~~~~~l~~aG~~~~--~--g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 357 HPVE--KIIEE--QTWYYFPHVSSEDYKAGWYE-KVEGMQGRRNTFYAGEIMS--F--GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp CCEE--EEEEE--EEEEEEEECCHHHHHTTHHH-HHHHTTTGGGEEECSGGGS--C--SSHHHHHHHHHHHHHHHT
T ss_pred Cccc--ccccc--cceeeeeccCHHHHhccHHH-HHHHHhCCCCceEeccccc--c--ccHHHHHHHHHHHHHHhc
Confidence 4322 23221 12221 11122223221 1112245689999999995 4 479999999999999885
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.54 E-value=2.5e-13 Score=125.80 Aligned_cols=219 Identities=14% Similarity=0.128 Sum_probs=143.4
Q ss_pred cCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEE-ecCEEEEeeChhhHHHhhhhccccCch
Q 017660 81 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETY-SAGAVVLAVGISTLQELIKNSILCNRE 158 (368)
Q Consensus 81 ~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~-~ad~VV~a~p~~~l~~ll~~~~l~~~~ 158 (368)
.+|+ ..|.+.+.+ |++|+++++|++|..++ ++++ |+++ |+.+ .||.||+|+|+..+.++++.. +.
T Consensus 106 ~~~~-~~l~~~l~~-----g~~i~~~~~v~~i~~~~--~~~~-v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~----~~ 172 (336)
T 1yvv_A 106 KPGM-SAITRAMRG-----DMPVSFSCRITEVFRGE--EHWN-LLDAEGQNHGPFSHVIIATPAPQASTLLAAA----PK 172 (336)
T ss_dssp SSCT-HHHHHHHHT-----TCCEECSCCEEEEEECS--SCEE-EEETTSCEEEEESEEEECSCHHHHGGGGTTC----HH
T ss_pred CccH-HHHHHHHHc-----cCcEEecCEEEEEEEeC--CEEE-EEeCCCcCccccCEEEEcCCHHHHHHhhccC----HH
Confidence 3454 456665543 88999999999999877 4454 6665 5555 499999999999988877542 23
Q ss_pred hHHhhhccCccceEEEEEEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEee--cCCCCCCCCHH
Q 017660 159 EFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY--HANELMPLKDD 236 (368)
Q Consensus 159 ~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~--~~~~~~~~~~~ 236 (368)
....+..+.+.+++++.+.++++.+.+ ...++..+....| +++.+.. +... +.+..+..... .+..+.+++++
T Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-l~~~~~~-p~~~-~~~~~~v~~~~~~~~~~~~~~~~~ 247 (336)
T 1yvv_A 173 LASVVAGVKMDPTWAVALAFETPLQTP--MQGCFVQDSPLDW-LARNRSK-PERD-DTLDTWILHATSQWSRQNLDASRE 247 (336)
T ss_dssp HHHHHTTCCEEEEEEEEEEESSCCSCC--CCEEEECSSSEEE-EEEGGGS-TTCC-CSSEEEEEEECHHHHHHTTTSCHH
T ss_pred HHHHHhhcCccceeEEEEEecCCCCCC--CCeEEeCCCceeE-EEecCcC-CCCC-CCCcEEEEEeCHHHHHHHHhCCHH
Confidence 345677788888889999998876532 2222222223344 3443322 2111 11122222221 12345678899
Q ss_pred HHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEeccccccCCCCccchHHhHHHHH
Q 017660 237 QVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 316 (368)
Q Consensus 237 e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~ 316 (368)
++.+++++.+.++++.... .+......+|.++++.+..+.. ......++|+||||+++. +++++|+.||..
T Consensus 248 ~~~~~l~~~l~~~lg~~~~-~p~~~~~~rw~~a~~~~~~~~~----~~~~~~~rl~laGDa~~g----~gv~~a~~sg~~ 318 (336)
T 1yvv_A 248 QVIEHLHGAFAELIDCTMP-APVFSLAHRWLYARPAGAHEWG----ALSDADLGIYVCGDWCLS----GRVEGAWLSGQE 318 (336)
T ss_dssp HHHHHHHHHHHTTCSSCCC-CCSEEEEEEEEEEEESSCCCCS----CEEETTTTEEECCGGGTT----SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCC-CCcEEEccccCccCCCCCCCCC----eeecCCCCEEEEecCCCC----CCHHHHHHHHHH
Confidence 9999999999999974321 3444556778776665544321 112345899999999963 589999999999
Q ss_pred HHHHHHHHhC
Q 017660 317 AANRVVDYLG 326 (368)
Q Consensus 317 aA~~Il~~~~ 326 (368)
+|+.|.+.+.
T Consensus 319 lA~~l~~~~~ 328 (336)
T 1yvv_A 319 AARRLLEHLQ 328 (336)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999977
No 26
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.37 E-value=1.2e-10 Score=112.49 Aligned_cols=121 Identities=14% Similarity=0.132 Sum_probs=84.0
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHh----hhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHHH
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQV----GLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPW 92 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~l 92 (368)
++.+|+.+|+++++.++.+.+ ++...+.. .+...|...+...+...+... .......+.+++||+ ..|+++|
T Consensus 173 ~~~~s~~~~l~~~~~~~~l~~-~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~--~~~~~~~~~~p~gG~-~~l~~al 248 (453)
T 2bcg_G 173 LDKNTMDEVYYKFGLGNSTKE-FIGHAMALWTNDDYLQQPARPSFERILLYCQSV--ARYGKSPYLYPMYGL-GELPQGF 248 (453)
T ss_dssp TTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHH--HHHSSCSEEEETTCT-THHHHHH
T ss_pred cccCCHHHHHHHhCCCHHHHH-HHHHHHHhccCccccCCchHHHHHHHHHHHHHH--HhhcCCceEeeCCCH-HHHHHHH
Confidence 578999999999888888665 43321110 011223333332222221111 111122345889996 5799999
Q ss_pred HHHHHHcCCEEeccceeeeEEec--CCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 93 MDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 93 ~~~l~~~G~~i~~~t~V~~I~~~--~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
++.++++|++|+++++|++|..+ + +++++|+++|+++.||+||+|++++
T Consensus 249 ~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 249 ARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKAPLVIADPTYF 299 (453)
T ss_dssp HHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEECSCEEECGGGC
T ss_pred HHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEECCEEEECCCcc
Confidence 99999999999999999999987 5 7788888888899999999999986
No 27
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.30 E-value=3.7e-10 Score=108.51 Aligned_cols=125 Identities=10% Similarity=0.096 Sum_probs=90.2
Q ss_pred hccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHh--hcCCCcceeeecCCcchhhhHHHH
Q 017660 16 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL--AHQKNFDLVWCRGTLREKIFEPWM 93 (368)
Q Consensus 16 ~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~--~~~~~~~~~~~~GG~~~~L~~~l~ 93 (368)
+++.+|+.+|+++++.++.+.+ ++...+....+.++.+.++...+..+..+.. ...+...+.+++||+ ..|+++|+
T Consensus 164 ~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~g~~~~~~p~gG~-~~l~~~l~ 241 (433)
T 1d5t_A 164 DPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLETINRIKLYSESLARYGKSPYLYPLYGL-GELPQGFA 241 (433)
T ss_dssp CTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSSSCCSEEEETTCT-THHHHHHH
T ss_pred ccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhcCCCcEEEeCcCH-HHHHHHHH
Confidence 4678999999999888887665 4332211122234556565544333333321 111123356899996 57999999
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
+.++++|++|+++++|++|..++ +++++|+.+|+++.||+||+|+++..
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEECGGGCG
T ss_pred HHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEECCCCCc
Confidence 99999999999999999999877 77888888899999999999999874
No 28
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.24 E-value=5.9e-09 Score=103.57 Aligned_cols=153 Identities=12% Similarity=0.060 Sum_probs=100.7
Q ss_pred chhhhhccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH--hhcCCCcceeeecCCcchhh
Q 017660 11 DVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLREKI 88 (368)
Q Consensus 11 ~~~~~~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--~~~~~~~~~~~~~GG~~~~L 88 (368)
...|..++.+|+.+||++++.++.++..+...+ +++. .+..++...+..+..++ ++.-+...+.|+.||++ .|
T Consensus 306 p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~--~~~~pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g-~L 380 (650)
T 1vg0_A 306 PDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMTS--ETTSCTVDGLKATKKFLQCLGRYGNTPFLFPLYGQG-EL 380 (650)
T ss_dssp HHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC----CCSCBHHHHHHHHHHHHHHTTSSSSSSEEEETTCTT-HH
T ss_pred hHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hccC--CCCCchhHHHHHHHHHHHHHHhhccCceEEeCCchh-HH
Confidence 345678899999999999999998765443321 2222 22234444433333332 12222235678999975 69
Q ss_pred hHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccC
Q 017660 89 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 167 (368)
Q Consensus 89 ~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~ 167 (368)
+++|++.++.+||+|+++++|++|.+++++|++++|++. |+++.||+||++. .. ++.. .. ..+.
T Consensus 381 ~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~--~~----lp~~------~~---~~~~ 445 (650)
T 1vg0_A 381 PQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED--SY----LSEN------TC---SRVQ 445 (650)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG--GG----BCTT------TT---TTCC
T ss_pred HHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh--hh----cCHh------Hh---cccc
Confidence 999999999999999999999999987633578888865 8899999999932 22 1211 10 1123
Q ss_pred ccceEEEEEEecCCCC
Q 017660 168 SIDVVSVKLWFDKKVT 183 (368)
Q Consensus 168 ~~~~~~v~l~~~~~~~ 183 (368)
+..+..+.+.+++++.
T Consensus 446 ~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 446 YRQISRAVLITDGSVL 461 (650)
T ss_dssp CEEEEEEEEEESSCSS
T ss_pred ccceEEEEEEecCCCC
Confidence 3456667777887754
No 29
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.22 E-value=5.5e-11 Score=114.65 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=90.1
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHH--hhcCCCcceeeecCCcchhhhHHHHH
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLREKIFEPWMD 94 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~--~~~~~~~~~~~~~GG~~~~L~~~l~~ 94 (368)
++++|+.+|++++++++.+.+.++.+++... ..++.+.++...+..+..+. +..-+.+.+.||+||++ .|+++|++
T Consensus 187 l~~~s~~e~l~~~gls~~l~~fl~~alaL~~-~~~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~-~L~~aL~r 264 (475)
T 3p1w_A 187 PYKLTMLEIYKHFNLCQLTIDFLGHAVALYL-NDDYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG-GIPEGFSR 264 (475)
T ss_dssp TTTSBHHHHHHHTTCCHHHHHHHHHHTSCCS-SSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTT-HHHHHHHH
T ss_pred ccCCCHHHHHHHcCCCHHHHHHHHHHHHhhc-CCCcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHH-HHHHHHHH
Confidence 5689999999999999998765434322111 12344567766665544432 12223456789999975 69999999
Q ss_pred HHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 95 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 95 ~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.++.+|++|+++++|++|..+++ |++++|++. |+++.||+||++++..
T Consensus 265 ~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 265 MCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHC--CEESSCCEEEEEECTT-SCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECCCcEEECCEEEECCCcc
Confidence 99999999999999999998333 788999987 5789999999998764
No 30
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.15 E-value=3.8e-12 Score=121.08 Aligned_cols=135 Identities=9% Similarity=-0.097 Sum_probs=92.0
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhhHHHHH
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMD 94 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~-~~~~-~~~~GG~~~~L~~~l~~ 94 (368)
.+.+|+.+|+.+ ++++++++.++.|++...++.+++++|+..+..+...+...+.. ...+ .+++||+ .+|+++|++
T Consensus 136 ~~~~s~~e~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 213 (399)
T 1v0j_A 136 ADAQNLEEKAIS-LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY-TAWLQNMAA 213 (399)
T ss_dssp TC----CCHHHH-HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH-HHHHHHHTC
T ss_pred CCcccHHHHHHH-HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH-HHHHHHHHh
Confidence 467899999998 68899999999999999999999999987642110000001100 1123 2789995 679998875
Q ss_pred HHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEE-ecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccceEE
Q 017660 95 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVS 173 (368)
Q Consensus 95 ~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~-~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~~~ 173 (368)
+.|++|++|++|++|.. . | +++ +||+||+|+|++.+.++. +..+.|.+...
T Consensus 214 ---~~g~~I~l~~~V~~I~~----~-v-------~~~~~aD~VI~t~p~~~l~~~~-------------l~~l~y~s~~~ 265 (399)
T 1v0j_A 214 ---DHRIEVRLNTDWFDVRG----Q-L-------RPGSPAAPVVYTGPLDRYFDYA-------------EGRLGWRTLDF 265 (399)
T ss_dssp ---STTEEEECSCCHHHHHH----H-H-------TTTSTTCCEEECSCHHHHTTTT-------------TCCCCEEEEEE
T ss_pred ---cCCeEEEECCchhhhhh----h-h-------hhcccCCEEEECCcHHHHHhhh-------------hCCCCcceEEE
Confidence 46889999999999952 2 2 145 799999999999877541 23456666666
Q ss_pred EEEEecCC
Q 017660 174 VKLWFDKK 181 (368)
Q Consensus 174 v~l~~~~~ 181 (368)
+.+.++++
T Consensus 266 ~~~~~~~~ 273 (399)
T 1v0j_A 266 EVEVLPIG 273 (399)
T ss_dssp EEEEESSS
T ss_pred EEEEEccc
Confidence 66777654
No 31
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.14 E-value=4.2e-11 Score=112.54 Aligned_cols=133 Identities=12% Similarity=0.020 Sum_probs=95.0
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhhHHHHH
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMD 94 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~-~~~~-~~~~GG~~~~L~~~l~~ 94 (368)
.+++|+.+|+.+. +++++++.++.|++...++.+|+++|+..+..+.......+.. ...+ .+++||+ ..|+++|++
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 203 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKMLE 203 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHHT
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH-HHHHHHHhc
Confidence 4689999999985 8899999999999999999999999986542110000001100 1122 3789995 679999875
Q ss_pred HHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccceEEE
Q 017660 95 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSV 174 (368)
Q Consensus 95 ~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~~~v 174 (368)
|++|++|++|++|. . . | .+.||+||+|+|++.+.++ .+..+.|.+...+
T Consensus 204 -----g~~i~l~~~V~~i~--~--~-v--------~~~~D~VV~a~p~~~~~~~-------------~l~~l~y~s~~~v 252 (367)
T 1i8t_A 204 -----GVDVKLGIDFLKDK--D--S-L--------ASKAHRIIYTGPIDQYFDY-------------RFGALEYRSLKFE 252 (367)
T ss_dssp -----TSEEECSCCGGGSH--H--H-H--------HTTEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEE
T ss_pred -----CCEEEeCCceeeec--h--h-h--------hccCCEEEEeccHHHHHHH-------------hhCCCCCceEEEE
Confidence 68999999999884 2 2 2 2579999999999876533 1234667777777
Q ss_pred EEEecCCC
Q 017660 175 KLWFDKKV 182 (368)
Q Consensus 175 ~l~~~~~~ 182 (368)
.+.++++.
T Consensus 253 ~~~~d~~~ 260 (367)
T 1i8t_A 253 TERHEFPN 260 (367)
T ss_dssp EEEESSSC
T ss_pred EEEecccc
Confidence 77777663
No 32
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.12 E-value=4.8e-11 Score=112.88 Aligned_cols=128 Identities=9% Similarity=-0.016 Sum_probs=91.7
Q ss_pred ccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhhHHHHH
Q 017660 17 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMD 94 (368)
Q Consensus 17 ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~-~~~~-~~~~GG~~~~L~~~l~~ 94 (368)
.+++|+.+|+.+. +++++++.++.|++...|+.+++++|+..+..+...+...+.. ...+ .+++||+ ..|+++|++
T Consensus 130 ~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 207 (384)
T 2bi7_A 130 ADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILN 207 (384)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHC
T ss_pred CCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHh
Confidence 4789999999985 8899999999999999999999999987642110000001100 1122 3889995 679999875
Q ss_pred HHHHcCCEEeccceee-eEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccceEE
Q 017660 95 SMRTRGCEFLDGRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVS 173 (368)
Q Consensus 95 ~l~~~G~~i~~~t~V~-~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~~~ 173 (368)
+.|++|++|++|+ +|.. .||+||+|+|++.+.+++ +..+.|.+...
T Consensus 208 ---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~-------------lg~l~y~s~~~ 254 (384)
T 2bi7_A 208 ---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ-------------YGRLGYRTLDF 254 (384)
T ss_dssp ---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT-------------TCCCCEEEEEE
T ss_pred ---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh-------------cCCCCcceEEE
Confidence 4688999999999 7731 299999999999877652 13356666666
Q ss_pred EEEEec
Q 017660 174 VKLWFD 179 (368)
Q Consensus 174 v~l~~~ 179 (368)
+.+.+|
T Consensus 255 v~~~~d 260 (384)
T 2bi7_A 255 KKFTYQ 260 (384)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 666666
No 33
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.79 E-value=1.1e-09 Score=92.14 Aligned_cols=96 Identities=11% Similarity=0.109 Sum_probs=69.2
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhc-cCCCCCceeee--EEeecCCCcc------ccCCCCcC-CCCCCCCCCCceEEeccc
Q 017660 228 NELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPKSLT------HFFPGSYK-YMMRGFTSFPNLFMAGDW 297 (368)
Q Consensus 228 ~~~~~~~~~e~~~~~~~~l~~~~-p~~~~~~i~~~--~~~~~~~~~~------~~~pg~~~-~~p~~~~~~~~L~laGd~ 297 (368)
..+..++++++++.++++|.++| |+. . .+... ...+|....+ .+.||... ..+....+.++|||||++
T Consensus 49 ~~~~~l~~~e~~~~~l~~L~~~~g~~~-~-~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ 126 (181)
T 2e1m_C 49 ARWDSFDDAERYGYALENLQSVHGRRI-E-VFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEH 126 (181)
T ss_dssp HHHTTSCTTTTHHHHHHHHHHHHCGGG-G-GTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGG
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhCCCc-H-hhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHH
Confidence 34566788999999999999999 665 2 34445 5667854321 22344321 122234577899999999
Q ss_pred cccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 298 ITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 298 ~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
++. ++ ++|+||+.||.+||++|++.++.
T Consensus 127 ts~-~~-g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 127 VSL-KH-AWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp GTT-ST-TSHHHHHHHHHHHHHHHHTCCC-
T ss_pred HcC-Cc-cCHHHHHHHHHHHHHHHHHHhcc
Confidence 985 66 79999999999999999999875
No 34
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.76 E-value=1.1e-08 Score=96.52 Aligned_cols=134 Identities=6% Similarity=-0.011 Sum_probs=95.1
Q ss_pred hhccCccHHHHHHHcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHh-hcCC-Ccce-eeecCCcchhhhHH
Q 017660 15 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIIL-AHQK-NFDL-VWCRGTLREKIFEP 91 (368)
Q Consensus 15 ~~ld~~S~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~-~~~~-~~~~-~~~~GG~~~~L~~~ 91 (368)
...+++|+.||+.+ .+++++++.++.|++...|+.+++++|+.++. .+..... .+.. ...+ .+|+||+ .+|+++
T Consensus 152 ~~~~~~s~~e~~~~-~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~-Rvp~~~~~d~~yf~~~~qg~P~gGy-~~l~e~ 228 (397)
T 3hdq_A 152 KVEQVRTSEDVVVS-KVGRDLYNKFFRGYTRKQWGLDPSELDASVTA-RVPTRTNRDNRYFADTYQAMPLHGY-TRMFQN 228 (397)
T ss_dssp CCSSCCBHHHHHHH-HHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGG-GSCCCSSCCCBSCCCSEEEEETTCH-HHHHHH
T ss_pred CCCCCcCHHHHHHH-hcCHHHHHHHHHHHhCchhCCCHHHHHHHHHH-hcCcccccCccchhhhheeccCCCH-HHHHHH
Confidence 35678999999997 68899999999999999999999999987543 2110000 0100 1122 3789996 578888
Q ss_pred HHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccce
Q 017660 92 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDV 171 (368)
Q Consensus 92 l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~ 171 (368)
|+ ++.|++|++|++|+++ + +.+.+|+||+|+|++.+... ....+.+.+.
T Consensus 229 l~---~~~g~~V~l~~~v~~~------~---------~~~~~d~vI~T~P~d~~~~~-------------~~g~L~yrsl 277 (397)
T 3hdq_A 229 ML---SSPNIKVMLNTDYREI------A---------DFIPFQHMIYTGPVDAFFDF-------------CYGKLPYRSL 277 (397)
T ss_dssp HT---CSTTEEEEESCCGGGT------T---------TTSCEEEEEECSCHHHHTTT-------------TTCCCCEEEE
T ss_pred HH---hccCCEEEECCeEEec------c---------ccccCCEEEEcCCHHHHHHH-------------hcCCCCCceE
Confidence 75 4568999999999843 1 23478999999999776421 1244667766
Q ss_pred EEEEEEecCCC
Q 017660 172 VSVKLWFDKKV 182 (368)
Q Consensus 172 ~~v~l~~~~~~ 182 (368)
..+.+.++++.
T Consensus 278 ~~~~~~~~~~~ 288 (397)
T 3hdq_A 278 EFRHETHDTEQ 288 (397)
T ss_dssp EEEEEEESSSC
T ss_pred EEEEEEecccc
Confidence 67777787553
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.27 E-value=2.4e-05 Score=72.52 Aligned_cols=57 Identities=12% Similarity=0.163 Sum_probs=47.5
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C--eEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g--~~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.++++|++|+++++|++|..+++ +.+ .|.++ | .++.||.||+|++.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGF-ELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSE-EEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceE-EEEECCCceeEEEeCEEEECCCcch
Confidence 46889999999999999999999999998763 434 46665 4 3899999999999974
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.25 E-value=1.4e-05 Score=76.46 Aligned_cols=58 Identities=19% Similarity=0.324 Sum_probs=50.9
Q ss_pred hhhhHHHHHHHHHcCCEEeccc---eeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhH
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 145 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t---~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l 145 (368)
..+++.|.+.++++|++|++++ +|++|..++ +++++|++. |+++.||.||+|++.+.-
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChh
Confidence 3688999999999999999999 999999876 678888887 558999999999999753
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.22 E-value=0.00012 Score=68.24 Aligned_cols=205 Identities=10% Similarity=0.048 Sum_probs=110.6
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhc
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 165 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~ 165 (368)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|.++++++.||.||+|++.+.-. +.+..... . .
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s~~-l~~~~g~~-~-------~ 217 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWANL-INAMAGIK-T-------K 217 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGHHH-HHHHHTCC-S-------C
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhHHH-HHHHcCCC-c-------C
Confidence 4688889999999999999999999999876 6677788876689999999999987422 32211000 0 0
Q ss_pred cCccceEEEEEEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEE-eecCCCCCCCCHHHHHHHHHH
Q 017660 166 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQAD-FYHANELMPLKDDQVVAKAVS 244 (368)
Q Consensus 166 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~e~~~~~~~ 244 (368)
+...+.-...+.++ +.........+...+. . ..++ .+ . +++-++... ......+....+++..+.+++
T Consensus 218 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~-~-~~y~-----~p-~--~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 218 IPIEPYKHQAVITQ-PIKRGTINPMVISFKY-G-HAYL-----TQ-T--FHGGIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCEEEEEEEEEEC-CCSTTSSCSEEEESTT-T-TEEE-----EC-C--SSSCCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred cCCCeeEeEEEEEc-cCCcccCCCeEEecCC-C-eEEE-----EE-e--CCeEEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 11111112222332 2110001011211100 0 1111 11 1 123222210 111112222344667888999
Q ss_pred HHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCC--CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHH
Q 017660 245 YLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 322 (368)
Q Consensus 245 ~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~--~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il 322 (368)
.+.++||++.+.++...+. . +...+++.. |.. ....+|+|++.-+. + .++.-|..+|..+|+.|.
T Consensus 287 ~~~~~~p~l~~~~~~~~~~----g-~r~~t~d~~---p~ig~~~~~~~~~~~~G~~--g---~G~~~a~~~g~~la~~i~ 353 (382)
T 1y56_B 287 YFTKIIPALKNLLILRTWA----G-YYAKTPDSN---PAIGRIEELNDYYIAAGFS--G---HGFMMAPAVGEMVAELIT 353 (382)
T ss_dssp HHHHHCGGGGGSEEEEEEE----E-EEEECTTSC---CEEEEESSSBTEEEEECCT--T---CHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCCceEEEE----e-ccccCCCCC---cEeccCCCCCCEEEEEecC--c---chHhhhHHHHHHHHHHHh
Confidence 9999999887544443221 1 111223321 211 12357999876444 2 355668889999999998
Q ss_pred HHh
Q 017660 323 DYL 325 (368)
Q Consensus 323 ~~~ 325 (368)
...
T Consensus 354 ~~~ 356 (382)
T 1y56_B 354 KGK 356 (382)
T ss_dssp HSS
T ss_pred CCC
Confidence 753
No 38
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.22 E-value=3.9e-05 Score=71.64 Aligned_cols=197 Identities=12% Similarity=0.040 Sum_probs=109.7
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhc
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 165 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~ 165 (368)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|.++++++.||.||+|++.+.. .+++.... .
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s~-~l~~~~~~----------~ 229 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWSG-MFFKQLGL----------N 229 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGTH-HHHHHTTC----------C
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhHH-HHHHhcCC----------C
Confidence 4588899999999999999999999998876 556 67777668999999999999643 23332110 0
Q ss_pred cCccceEEEEEEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHH
Q 017660 166 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSY 245 (368)
Q Consensus 166 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~~~~ 245 (368)
+...+.-...+.++.+.. ..+ ..++. ...| +. +. +++.++.........+....+++..+.+++.
T Consensus 230 ~~~~~~~g~~~~~~~~~~-~~~-~~~~~---~~~~-~~------p~---~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~ 294 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDDI-PLT-KTLYH---DHCY-IV------PR---KSGRLVVGATMKPGDWSETPDLGGLESVMKK 294 (382)
T ss_dssp CCCEEEEEEEEEEECCSS-CCC-SEEEE---TTEE-EE------EC---TTSEEEEECCCEETCCCCSCCHHHHHHHHHH
T ss_pred CceeccceEEEEECCCCC-Ccc-ceEEc---CCEE-EE------Ec---CCCeEEEeecccccCCCCCCCHHHHHHHHHH
Confidence 111222223333433211 111 11111 0001 11 10 1233321111111123333456678889999
Q ss_pred HhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCC--CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHH
Q 017660 246 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 323 (368)
Q Consensus 246 l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~--~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~ 323 (368)
+.+++|+++..++...+.- ...++++.. |.. ....+|+|+++.+. ++ ++..|..+|..+|+.|+.
T Consensus 295 ~~~~~p~l~~~~~~~~w~g-----~~~~t~d~~---p~ig~~~~~~~l~~~~G~~--g~---G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 295 AKTMLPAIQNMKVDRFWAG-----LRPGTKDGK---PYIGRHPEDSRILFAAGHF--RN---GILLAPATGALISDLIMN 361 (382)
T ss_dssp HHHHCGGGGGSEEEEEEEE-----EEEECSSSC---CEEEEETTEEEEEEEECCS--SC---TTTTHHHHHHHHHHHHTT
T ss_pred HHHhCCCcCCCceeeEEEE-----ecccCCCCC---cEeccCCCcCCEEEEEcCC--cc---hHHHhHHHHHHHHHHHhC
Confidence 9999998865344332211 111223321 211 12357899887655 33 345588999999999865
Q ss_pred H
Q 017660 324 Y 324 (368)
Q Consensus 324 ~ 324 (368)
.
T Consensus 362 ~ 362 (382)
T 1ryi_A 362 K 362 (382)
T ss_dssp C
T ss_pred C
Confidence 3
No 39
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.20 E-value=0.00016 Score=67.22 Aligned_cols=56 Identities=16% Similarity=0.281 Sum_probs=49.1
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
..++..|.+.++++|++|+++++|++|..++ ++ +.|+++++++.||+||+|++++.
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GA-WEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TE-EEEECSSEEEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--Ce-EEEEeCCCEEEcCEEEECCChhH
Confidence 4688999999999999999999999999877 55 56777767999999999999975
No 40
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.07 E-value=0.00027 Score=66.39 Aligned_cols=200 Identities=14% Similarity=0.073 Sum_probs=108.3
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhcc
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 166 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l 166 (368)
.+.+.|.+.+++.|++|+++++|++|..++ +++++|.++++++.||.||+|++.+.-. +...... .+
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s~~-l~~~~g~----------~~ 241 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHSSV-LAEMAGF----------EL 241 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGHHH-HHHHHTC----------CC
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhHHH-HHHHcCC----------CC
Confidence 588899999999999999999999999876 6677888875589999999999986421 2221100 00
Q ss_pred CccceEEEEEEecCCCCCCCCCceeecCCCCccceeeeccccccccCCCCCeEEEEEeec-CCCCCCCCHHHHHHHHHHH
Q 017660 167 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH-ANELMPLKDDQVVAKAVSY 245 (368)
Q Consensus 167 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~e~~~~~~~~ 245 (368)
...+.-...+..+ +...... ..+...+ . ..++ .+. +++.++...... ...+....+.+..+.+++.
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~-~~~~~~~--~-~~y~-----~p~---~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 242 PIQSHPLQALVSE-LFEPVHP-TVVMSNH--I-HVYV-----SQA---HKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp CEEEEEEEEEEEE-EBCSCCC-SEEEETT--T-TEEE-----EEC---TTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred CccccceeEEEec-CCccccC-ceEEeCC--C-cEEE-----EEc---CCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 1111111112222 2110001 1111100 0 1111 010 123333222221 1112223345677888999
Q ss_pred HhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCC-CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 246 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 246 l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~-~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+.+++|.+.+.++...+.- . ...+++.. |.. ..+.+|+|++..+.. + ++..|...|..+|+.|...
T Consensus 309 ~~~~~p~l~~~~~~~~w~g-~----~~~t~d~~---p~ig~~~~~~l~~~~G~~g--~---G~~~a~~~g~~la~~i~g~ 375 (405)
T 2gag_B 309 AVELFPIFARAHVLRTWGG-I----VDTTMDAS---PIISKTPIQNLYVNCGWGT--G---GFKGTPGAGFTLAHTIAND 375 (405)
T ss_dssp HHHHCGGGGGCEECEEEEE-E----EEEETTSC---CEEEECSSBTEEEEECCGG--G---CSTTHHHHHHHHHHHHHHT
T ss_pred HHHhCCccccCCcceEEee-c----cccCCCCC---CEecccCCCCEEEEecCCC--c---hhhHHHHHHHHHHHHHhCC
Confidence 9999998864444433221 1 11223321 211 112578988775552 3 3345888999999999865
Q ss_pred h
Q 017660 325 L 325 (368)
Q Consensus 325 ~ 325 (368)
.
T Consensus 376 ~ 376 (405)
T 2gag_B 376 E 376 (405)
T ss_dssp S
T ss_pred C
Confidence 3
No 41
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.01 E-value=0.00016 Score=69.12 Aligned_cols=62 Identities=27% Similarity=0.379 Sum_probs=51.2
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEe---------------cCCCceEEEEEECCeEE--ecCEEEEeeChhhHHHh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQEL 148 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~---------------~~~~g~v~~v~~~g~~~--~ad~VV~a~p~~~l~~l 148 (368)
..+...|.+.+++.|++|+++++|++|.. ++ ++|++|.++++++ .||.||+|++++.- +|
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~-~l 257 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWSN-RL 257 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGHH-HH
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCHH-HH
Confidence 36889999999999999999999999987 44 6677888875588 99999999999743 34
Q ss_pred hh
Q 017660 149 IK 150 (368)
Q Consensus 149 l~ 150 (368)
++
T Consensus 258 ~~ 259 (448)
T 3axb_A 258 LN 259 (448)
T ss_dssp HG
T ss_pred HH
Confidence 44
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.92 E-value=0.00019 Score=72.70 Aligned_cols=56 Identities=13% Similarity=0.126 Sum_probs=47.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce-EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE-TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~-~~~ad~VV~a~p~~~ 144 (368)
..++..|.+.+++.|++|+++++|++|..++ +++ .|.++ |+ +++||.||+|++.+.
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 4688999999999999999999999999887 444 56665 55 899999999999973
No 43
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.90 E-value=0.00023 Score=72.02 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=48.4
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
..++..|.+.+++.|++|+++++|++|..++ +++ .|.+. |+++.||.||+|++.+.
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeE-EEEECCCCEEECCEEEECCCcch
Confidence 4688999999999999999999999999887 554 67775 67899999999999873
No 44
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.89 E-value=0.00072 Score=66.73 Aligned_cols=57 Identities=30% Similarity=0.313 Sum_probs=49.2
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC----C--eEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g--~~~~ad~VV~a~p~~~ 144 (368)
..|+..+.+.++++|++|+++++|++|..++ ++|++|++. | .++.||.||.|++++.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 4688999999999999999999999999887 778888763 3 3789999999999975
No 45
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.84 E-value=0.00099 Score=62.09 Aligned_cols=201 Identities=10% Similarity=0.090 Sum_probs=108.2
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhc
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 165 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~ 165 (368)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|.+++++++||.||+|++.+.- .+++.... .
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~~~-~l~~~~g~----------~ 215 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDISP--DSV-KIETANGSYTADKLIVSMGAWNS-KLLSKLNL----------D 215 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCE-EEEETTEEEEEEEEEECCGGGHH-HHGGGGTE----------E
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeE-EEEeCCCEEEeCEEEEecCccHH-HHhhhhcc----------C
Confidence 3688999999999999999999999999876 444 46777778999999999998643 34433210 0
Q ss_pred cCccceEEEEEEecCCC--CC---CCCCceeecCCCCccceeeeccccccccCCCCC-eEE-EEEee----cCCCCCCCC
Q 017660 166 LASIDVVSVKLWFDKKV--TV---PNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSA-TVI-QADFY----HANELMPLK 234 (368)
Q Consensus 166 l~~~~~~~v~l~~~~~~--~~---~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~-~v~-~~~~~----~~~~~~~~~ 234 (368)
+...+.-...+.++.+. .. ..+ .+.... .... ++ ..+. .++ .++ ..+.. .........
T Consensus 216 ~pl~~~rg~~~~~~~~~~~~~~~~~~p--~~~~~~-~~~~-~y----~~p~---~~g~~~~iG~~~~~~~~~~~~~~~~~ 284 (389)
T 2gf3_A 216 IPLQPYRQVVGFFESDESKYSNDIDFP--GFMVEV-PNGI-YY----GFPS---FGGCGLKLGYHTFGQKIDPDTINREF 284 (389)
T ss_dssp CCCEEEEEEEEEECCCHHHHBGGGTCC--EEEEEE-TTEE-EE----EECB---STTCCEEEEESSCCEECCTTTCCCCT
T ss_pred CceEEEEEEEEEEecCcccccccccCC--EEEEeC-CCCc-EE----EcCC---CCCCcEEEEEcCCCCccCcccccCcc
Confidence 11122222233343221 00 001 010000 0000 01 0111 122 332 22111 111111112
Q ss_pred --HHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCC--CCCCCceEEeccccccCCCCccchHH
Q 017660 235 --DDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERS 310 (368)
Q Consensus 235 --~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~--~~~~~~L~laGd~~~~~~~~~~~egA 310 (368)
.++..+.+++.+.++||.+.. .+...+. +....+|+.. |.. ....+|+|++..+. ++ ++.-|
T Consensus 285 ~~~~~~~~~l~~~~~~~~P~l~~-~~~~~w~-----g~r~~t~D~~---p~ig~~~~~~~l~~a~G~~--g~---G~~~a 350 (389)
T 2gf3_A 285 GVYPEDESNLRAFLEEYMPGANG-ELKRGAV-----CMYTKTLDEH---FIIDLHPEHSNVVIAAGFS--GH---GFKFS 350 (389)
T ss_dssp TSSHHHHHHHHHHHHHHCGGGCS-CEEEEEE-----EEEEECTTSC---CEEEEETTEEEEEEEECCT--TC---CGGGH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCC-CceEEEE-----EEeccCCCCC---eEEccCCCCCCEEEEECCc--cc---ccccc
Confidence 345568899999999999875 4443221 1112233322 211 12357899887554 33 34558
Q ss_pred hHHHHHHHHHHHHHh
Q 017660 311 YVTGLEAANRVVDYL 325 (368)
Q Consensus 311 ~~Sg~~aA~~Il~~~ 325 (368)
...|..+|+.|+...
T Consensus 351 p~~g~~la~~i~~~~ 365 (389)
T 2gf3_A 351 SGVGEVLSQLALTGK 365 (389)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCCC
Confidence 889999999998753
No 46
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.78 E-value=0.002 Score=63.63 Aligned_cols=57 Identities=16% Similarity=0.202 Sum_probs=48.5
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~~ 144 (368)
..++..+.+.++++|++|+++++|++|..++ ++|++|++ +|+ ++.||.||.|++++.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 3578888888999999999999999999877 67888875 343 689999999999984
No 47
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.69 E-value=0.0034 Score=58.51 Aligned_cols=56 Identities=13% Similarity=0.050 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC----CeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----KETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~~~~ad~VV~a~p~~~ 144 (368)
.|.+.|.+.+++.|++|+.+++|++|..++ +++++|++. +.+++||.||.|.+...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 477888888888999999999999999886 777767762 45899999999999865
No 48
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.68 E-value=0.004 Score=58.25 Aligned_cols=55 Identities=31% Similarity=0.427 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
.+...|.+.+++.|++|+++++|++|..++ ++++ |.+++++++||.||+|++.+.
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~-v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA--DGVS-VTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEE-EEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEE-EEECCCEEEcCEEEEcCCcCh
Confidence 578889999999999999999999999876 5554 666666899999999999864
No 49
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.51 E-value=6.5e-05 Score=58.78 Aligned_cols=107 Identities=11% Similarity=0.022 Sum_probs=53.1
Q ss_pred eEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhccCccceEEEEEEecCCCCCCCCCceeecCCCCccceeeecccc
Q 017660 129 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 208 (368)
Q Consensus 129 ~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~ 208 (368)
++++||+||+|+|+.+++.+...+.++ ....+++..+.+....|+.+.|++++|.+.. . .+ +.+ .
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~-~---------~g---d~s-~ 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEFTE-A---------DW---KRE-L 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGCCH-H---------HH---HHH-H
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCCCC-c---------cc---ccc-C
Confidence 578999999999999999776555563 4557888999999999999999999985421 0 01 111 0
Q ss_pred ccccCCCCCeEEEEEe-e-cCCCCCCCCHHHHHHHHHHHHhhhccCCC
Q 017660 209 YDEHKDDSATVIQADF-Y-HANELMPLKDDQVVAKAVSYLSKCIKDFS 254 (368)
Q Consensus 209 ~~~~~~~~~~v~~~~~-~-~~~~~~~~~~~e~~~~~~~~l~~~~p~~~ 254 (368)
.+. ..+.++..+. . .+..|..+++ +..+.++..|..++|+.+
T Consensus 69 ~~~---~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~ 112 (130)
T 2e1m_B 69 DAI---APGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVD 112 (130)
T ss_dssp HHH---STTHHHHHHHHCCCSCCCC-----------------------
T ss_pred CCC---CCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCc
Confidence 010 1122221110 1 2335666654 667789999999999765
No 50
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.50 E-value=0.011 Score=56.37 Aligned_cols=57 Identities=23% Similarity=0.237 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChhhH
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 145 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~~l 145 (368)
.+.+.|.+.+++.|++|+++++|++|..++ ++|++|++ +|+ +++||.||.|.+....
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 477888888888999999999999999876 66766654 455 7899999999998653
No 51
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.49 E-value=0.014 Score=54.08 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--Ce--EEecCEEEEeeChhhH
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAGAVVLAVGISTL 145 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g~--~~~ad~VV~a~p~~~l 145 (368)
.+-..|.+.+++.|++++++++|+.+..++ +++.++... ++ +++||.||-|-+....
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~ 163 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccccH
Confidence 366777888888999999999999999887 667666543 43 6899999999887643
No 52
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.45 E-value=0.013 Score=56.72 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=47.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChhhH
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 145 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~~l 145 (368)
..++..|.+.++++|++|+++++|++|..++ + +++|.+ +|+ ++.||.||.|++++.-
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 4588999999999999999999999999865 4 567776 354 7899999999999853
No 53
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.32 E-value=0.00075 Score=62.96 Aligned_cols=112 Identities=11% Similarity=0.066 Sum_probs=63.6
Q ss_pred hhccCccHHHHHH-HcCCCHHHHHHHHHHHHHhhhcCCchhhhHHHHHHHHHHHHhhcCCCcceeeecCCcchhhhHHHH
Q 017660 15 RKYDSITARELFK-QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 93 (368)
Q Consensus 15 ~~ld~~S~~d~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~sa~~~~~~l~~~~~~~~~~~~~~~~~GG~~~~L~~~l~ 93 (368)
++||++|+.+||+ +.++++.+.+.+ ..++ .+. .....|+..++.. .+.. .....+.-+.||+ +.|+++|+
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~--~~~-~~~~~s~l~~l~~---~~~~-~~~~~~~~i~GG~-~~l~~~l~ 327 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVEAI-GTIE--NMT-SRLHLAFFHSFLG---RSDI-DPRATYWEIEGGS-RMLPETLA 327 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT--TCT-TTTTSBHHHHHHH---CSCS-CTTCCEEEETTCT-THHHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc--Ccc-ccchhhHHHHHHH---hhhh-ccCCceEEECCcH-HHHHHHHH
Confidence 5689999999998 789999877644 3222 121 1224555443322 1111 1122334457995 67999999
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEee
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAV 140 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~ 140 (368)
+.+. .+|++|++|++|..+++ | |..+..+.......+|.+.+
T Consensus 328 ~~l~---~~i~l~~~V~~I~~~~~-g-v~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 328 KDLR---DQIVMGQRMVRLEYYDP-G-RDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp HHGG---GTEECSEEEEEEEECCC-C--------------CCEEEEE
T ss_pred HhcC---CcEEecCeEEEEEECCC-c-eEEEeCCCcCCCCCeeEEEe
Confidence 8774 68999999999998774 5 43232222233555566554
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.28 E-value=0.023 Score=53.36 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=45.4
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce--EEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~--~~~ad~VV~a~p~~~ 144 (368)
.+.+.|.+.+++.|++|+.+++|++|..+++ +.+..|... |+ +++||.||.|.+...
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 5778888888888999999999999998763 433344444 55 699999999999865
No 55
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.27 E-value=0.00062 Score=59.26 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCCCCCCCceEEeccccccCCCCccchHHh
Q 017660 232 PLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSY 311 (368)
Q Consensus 232 ~~~~~e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~~~~~~~L~laGd~~~~~~~~~~~egA~ 311 (368)
+....+..+.....+...+..... .+......+|.++.+..... .+...+..+|+|+|||++.+ .++++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~w~~a~~~~~~~----~~~~~~~~~~v~l~GDa~~g----~gv~~A~ 313 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCTMP-APVFSLAHRWLYARPAGAHE----WGALSDADLGIYVCGDWCLS----GRVEGAW 313 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSCCC-CCSEEEEEEEEEEEESSCCC----CSSEEETTTTEEECCGGGTT----SSHHHHH
T ss_pred cccchhhhhhhhhhhhhhccCCcC-cchheeccceeecccccccC----ccceeeCCCCEEEEecccCC----cCHHHHH
Confidence 344555666666666666543322 45555566676554322111 11123456899999999852 4789999
Q ss_pred HHHHHHHHHHHHHhCC
Q 017660 312 VTGLEAANRVVDYLGD 327 (368)
Q Consensus 312 ~Sg~~aA~~Il~~~~~ 327 (368)
.||+.||+.|++.|..
T Consensus 314 ~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 314 LSGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999999874
No 56
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.01 E-value=0.038 Score=53.89 Aligned_cols=63 Identities=21% Similarity=0.268 Sum_probs=47.9
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCc---eEEEEEECC---eEEecCEEEEeeChhh-HHHhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC---CISDVVCGK---ETYSAGAVVLAVGIST-LQELI 149 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g---~v~~v~~~g---~~~~ad~VV~a~p~~~-l~~ll 149 (368)
..|...|.+.+++.|++|+++++|++|..+++ + +|+....++ .+++||.||.|.+... +.+.+
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 35788888889999999999999999998762 2 555332334 5799999999999864 44444
No 57
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.91 E-value=0.037 Score=53.69 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC---Ce--EEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~---g~--~~~ad~VV~a~p~~~ 144 (368)
.|.+.|.+.+++.|++|+++++|++|..++ ++|++|++. |+ +++||.||.|.+...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 577888888888999999999999999876 667766653 53 799999999999864
No 58
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.73 E-value=0.059 Score=50.38 Aligned_cols=58 Identities=19% Similarity=0.162 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh-HHHhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST-LQELI 149 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~-l~~ll 149 (368)
.|.+.|.+.+++ ++|+++++|++|..++ ++|+ |++. |++++||.||.|.+... +.+.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET--TEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC--CcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 466777777766 8999999999999887 5554 5554 67899999999998853 34433
No 59
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.68 E-value=0.0042 Score=59.34 Aligned_cols=64 Identities=16% Similarity=0.260 Sum_probs=52.3
Q ss_pred eecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 79 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 79 ~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
++..+-...+.+.|.+.+++.|++|+++++|++|..++ ++|++|.+. |++++||.||+|++...
T Consensus 127 ~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 127 FPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp EETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred ECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 44332245799999999999999999999999999876 677788887 55699999999998765
No 60
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.56 E-value=0.0047 Score=63.83 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=50.5
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
.++..|.+.++++|++|+++++|++|..++ +++++|.+++++++||.||+|++++.
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccch
Confidence 588999999999999999999999999876 66778888877999999999999985
No 61
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.52 E-value=0.005 Score=60.38 Aligned_cols=57 Identities=28% Similarity=0.293 Sum_probs=49.9
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++.|++|+++++|++|..++ +++++|.++ |+++.||.||+|++...
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 4578888889999999999999999999876 668888887 66899999999999875
No 62
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.50 E-value=0.017 Score=52.98 Aligned_cols=189 Identities=13% Similarity=0.059 Sum_probs=100.4
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhHHHhhhhccccCchhHHhhhc
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 165 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l~~ll~~~~l~~~~~~~~i~~ 165 (368)
..++..|.+.++++|++|+. ++|++|...+ + +.||.||+|++++.-. ++++.
T Consensus 142 ~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--~-----------~~a~~VV~A~G~~s~~-l~~~~------------- 193 (351)
T 3g3e_A 142 KNYLQWLTERLTERGVKFFQ-RKVESFEEVA--R-----------EGADVIVNCTGVWAGA-LQRDP------------- 193 (351)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--H-----------TTCSEEEECCGGGGGG-TSCCT-------------
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--c-----------CCCCEEEECCCcChHh-hcCCC-------------
Confidence 36889999999999999999 9999885432 2 5799999999997633 33321
Q ss_pred cCccceEEEEEEecCCCCCCCCCceeecC---CCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHH
Q 017660 166 LASIDVVSVKLWFDKKVTVPNVSNACSGF---GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKA 242 (368)
Q Consensus 166 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~s~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~e~~~~~ 242 (368)
...+.-...+.++.+. .. ...+... .... ..++ .+ . +++-++..+... ..+....+++..+.+
T Consensus 194 -~l~p~rg~~~~~~~~~-~~--~~~~~~~~~~~~~~-~~y~-----~p-~--~~~~~iGg~~~~-~~~~~~~~~~~~~~l 259 (351)
T 3g3e_A 194 -LLQPGRGQIMKVDAPW-MK--HFILTHDPERGIYN-SPYI-----IP-G--TQTVTLGGIFQL-GNWSELNNIQDHNTI 259 (351)
T ss_dssp -TCEEEEEEEEEEECTT-CC--SEEEECCTTTCTTC-SCEE-----EE-C--SSCEEEECCCEE-TCCCCSCCHHHHHHH
T ss_pred -ceeecCCcEEEEeCCC-cc--eEEEeccccCCCCc-eeEE-----Ee-C--CCcEEEeeeeec-CCCCCCCCHHHHHHH
Confidence 1122222333343321 11 1111100 0000 1011 01 1 122222211111 122333456678889
Q ss_pred HHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCC-CC--CCCCCCCceEEeccccccCCCCccchHHhHHHHHHHH
Q 017660 243 VSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY-MM--RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 319 (368)
Q Consensus 243 ~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~-~p--~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~ 319 (368)
++.+.++||.+.+.++...+.- +...+|+ .+. .| ......+|+|++.-+. + .++..|..+|+.+|+
T Consensus 260 ~~~~~~~~P~l~~~~i~~~w~G-----~r~~t~D-~p~~~~~ig~~~~~~~~~~~~G~~--g---~G~~~ap~~g~~la~ 328 (351)
T 3g3e_A 260 WEGCCRLEPTLKNARIIGERTG-----FRPVRPQ-IRLEREQLRTGPSNTEVIHNYGHG--G---YGLTIHWGCALEAAK 328 (351)
T ss_dssp HHHHHHHCGGGGGCEEEEEEEE-----EEEECSS-CEEEEEEECCSSSCEEEEEEECCT--T---CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccCCcEeeeeEe-----eCCCCCC-ccceeeeccCCCCCCeEEEEeCCC--c---chHhhhHHHHHHHHH
Confidence 9999999999875455433221 1112222 110 00 0111257888876444 2 355668889999999
Q ss_pred HHHHHhCC
Q 017660 320 RVVDYLGD 327 (368)
Q Consensus 320 ~Il~~~~~ 327 (368)
.|...+..
T Consensus 329 li~~~~~~ 336 (351)
T 3g3e_A 329 LFGRILEE 336 (351)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99888763
No 63
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.50 E-value=0.0065 Score=57.13 Aligned_cols=58 Identities=22% Similarity=0.273 Sum_probs=49.9
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.++++|++|+++++|++|..++ +++.+|.+. |+++.||.||++++...
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~p 241 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVIP 241 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCcc
Confidence 45688888899999999999999999998776 677788876 67899999999998753
No 64
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.50 E-value=0.0063 Score=57.44 Aligned_cols=58 Identities=19% Similarity=0.253 Sum_probs=49.6
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.++++|++|+++++|++|..++ +++++|.+. |+++.||.||++++...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 45688888889999999999999999998766 678788876 77899999999998753
No 65
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.45 E-value=0.04 Score=54.53 Aligned_cols=56 Identities=21% Similarity=0.165 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--CC--eEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g--~~~~ad~VV~a~p~~~ 144 (368)
.+...|.+.+++.|++|+.+++|++|..++ +.+++|++ +| .+++||.||.|.+...
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 577888888888999999999999999864 33456666 35 4799999999999865
No 66
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.31 E-value=0.0068 Score=55.96 Aligned_cols=55 Identities=18% Similarity=0.327 Sum_probs=46.9
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
.+++.|.+.+++.|++|+++++|++|..++ +++ .|.+++++++||.||+|++++.
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGV-TIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSE-EEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEE-EEEECCCeEEcCEEEEcCCccH
Confidence 588999999999999999999999999876 444 4667655799999999999874
No 67
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.28 E-value=0.0065 Score=59.08 Aligned_cols=57 Identities=21% Similarity=0.303 Sum_probs=48.4
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--Ce--EEecC-EEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAG-AVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g~--~~~ad-~VV~a~p~~~ 144 (368)
.+.+.|.+.+++.|++|+++++|++|..+++ |+|++|.+. ++ ++.|| .||+|++...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 6899999999999999999999999998743 788888764 43 58996 9999988764
No 68
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.22 E-value=0.22 Score=46.14 Aligned_cols=56 Identities=9% Similarity=-0.024 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--CCe--EEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~a~p~~~ 144 (368)
.+.+.|.+.+.+.|++|+++++|++|..+++ +.+ .|++ +|+ +++||.||.|.+...
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERP-YVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSC-EEEEEETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC-Cce-EEEEecCCcEEEEEeCEEEECCCCCc
Confidence 4777888888888999999999999987642 333 3544 566 799999999999854
No 69
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.12 E-value=0.013 Score=57.79 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=48.4
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---CCe--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|.+ +|+ ++.||.||+|++...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 46889999999999999999999999998654 67877765 355 689999999998853
No 70
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.11 E-value=0.014 Score=55.13 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=51.2
Q ss_pred eecCCcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 79 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 79 ~~~GG~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
++... ...+.+.|.+.+++.|++|+++++|++|..++ ++ +.|.+.+++++||.||+|++...
T Consensus 126 ~~~~~-~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~-~~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHS-AKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SG-FRVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EESSC-HHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TE-EEEEETTEEEEESEEEECCCCSS
T ss_pred eeCCC-HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CE-EEEEECCcEEEeeEEEECCCCcc
Confidence 44444 35799999999999999999999999999876 54 45777766999999999999865
No 71
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.03 E-value=0.012 Score=56.19 Aligned_cols=59 Identities=12% Similarity=0.208 Sum_probs=49.2
Q ss_pred cchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 84 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 84 ~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
+...+.+.+.+.+++.|++|+++++|++|..++ +++..+.++|+++++|.||++++...
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCCC
Confidence 345678888899999999999999999998644 66766777788899999999998754
No 72
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.88 E-value=0.015 Score=57.30 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=48.3
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---CCe--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ ++.||.||+|++...
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 46889999999999999999999999988753 56877765 354 689999999998754
No 73
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.83 E-value=0.02 Score=56.54 Aligned_cols=58 Identities=22% Similarity=0.258 Sum_probs=46.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC---Ce--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~---g~--~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|.+. |+ ++.||.||+|++...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 46889999999999999999999999987653 567777653 54 689999999998643
No 74
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.55 E-value=0.034 Score=53.28 Aligned_cols=59 Identities=19% Similarity=0.269 Sum_probs=47.6
Q ss_pred cchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 84 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 84 ~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
+...+.+.+.+.+++.|++|+++++|++|..++ ++++.+..+|+++.||.||++++...
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g~~i~aD~Vv~a~G~~p 258 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDKRTLDADLVILAAGVSP 258 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESSCEEECSEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCCCEEEcCEEEECCCCCc
Confidence 345688889999999999999999999998755 66653334577999999999998753
No 75
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.48 E-value=0.029 Score=48.29 Aligned_cols=54 Identities=15% Similarity=0.049 Sum_probs=45.1
Q ss_pred hhhHHHHHHHHHc-CCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+.|.+.+++. |++|+ +++|++|..++ +++++|.+. |++++||.||.|++..
T Consensus 69 ~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 69 AFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCC
Confidence 5778888888887 89998 67999999876 667778776 5689999999999984
No 76
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=95.42 E-value=0.24 Score=48.75 Aligned_cols=60 Identities=20% Similarity=0.144 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--C-C-eEEecCEEEEeeChhh-HHHhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G-K-ETYSAGAVVLAVGIST-LQELI 149 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~-g-~~~~ad~VV~a~p~~~-l~~ll 149 (368)
.|.+.|.+.+++.|++|+.+++|++|..++ ++|+ |++ . | ++++||.||.|.+... +.+.+
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~l 213 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLA 213 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEE-EEEEETTEEEEEEESEEEECSCSSCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHc
Confidence 467788888888899999999999998876 4454 554 3 5 5899999999999864 34444
No 77
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.42 E-value=0.026 Score=53.88 Aligned_cols=58 Identities=10% Similarity=0.105 Sum_probs=48.1
Q ss_pred cchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 84 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 84 ~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
+...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.+++++++||.||++++...
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLHP 244 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCBC
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCCC
Confidence 345678888899999999999999999998765 556 5777766999999999998753
No 78
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.32 E-value=0.035 Score=52.13 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=48.0
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEec----CCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~----~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.|.+.+++.|++|+++++|++|..+ + +++ .|.+++++++||.||+|++...
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~~-~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VRF-VLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CCE-EEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--CeE-EEEECCCEEECCEEEECCCCcc
Confidence 3568999999999999999999999999876 4 444 5777766899999999998765
No 79
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.29 E-value=0.04 Score=52.19 Aligned_cols=57 Identities=19% Similarity=0.348 Sum_probs=47.2
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEe--cCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~--~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|.. ++ ++++.|.+. |+++.+|.||++++..
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 345777888889999999999999999986 44 567677775 6789999999999875
No 80
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.20 E-value=0.012 Score=55.26 Aligned_cols=56 Identities=16% Similarity=0.151 Sum_probs=43.1
Q ss_pred hhhhHHHHHHHHHcCCEEeccceee---------eEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~---------~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++.|++|+++++|+ +|..++ +++ +|.++++++.||.||+|++++.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 3588999999999999999999999 887765 555 6766666899999999999974
No 81
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.16 E-value=0.046 Score=54.06 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-------C---------eEEecCEEEEeeChhhH
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-------K---------ETYSAGAVVLAVGISTL 145 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-------g---------~~~~ad~VV~a~p~~~l 145 (368)
.|.+.|.+.+++.|++|+.+++|++|..+++ |+|++|.+. | .+++||.||.|.+....
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4778888889989999999999999998765 677777764 2 57999999999998643
No 82
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=95.16 E-value=0.53 Score=42.99 Aligned_cols=45 Identities=24% Similarity=0.280 Sum_probs=37.1
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhH
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 145 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l 145 (368)
..+...|.+.++++|++|+. ++|++|.. . . + .||.||+|++.+.-
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l~~----~-~--------~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSLEQ----A-F--------D-GADLVVNATGLGAK 186 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBGGG----T-C--------S-SCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccHhh----c-C--------c-CCCEEEECCCcchh
Confidence 46889999999999999999 99998842 2 0 2 89999999999763
No 83
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.98 E-value=0.044 Score=44.86 Aligned_cols=54 Identities=17% Similarity=0.131 Sum_probs=44.5
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|++++++ +|++|..++ +.+ .|.++++++++|.||+|++..
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~--~~~-~v~~~~g~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMG--GVF-EVETEEGVEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECS--SSE-EEECSSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC--CEE-EEEECCCEEEECEEEECCCCC
Confidence 458888889999999999999 999998766 333 466664489999999999975
No 84
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.89 E-value=0.066 Score=52.08 Aligned_cols=58 Identities=21% Similarity=0.253 Sum_probs=46.3
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceE--EEEEEC-Ce-EEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVCG-KE-TYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v--~~v~~~-g~-~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +++ ..|.++ |+ +++||.||+|++..
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 345778889999999999999999999987553 544 245665 55 79999999999865
No 85
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.88 E-value=0.056 Score=48.47 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=44.2
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-----C--eEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-----K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-----g--~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+. | +++.+|.||++++..
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 3467778888888999999999999998765 556666653 3 478999999998863
No 86
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=94.84 E-value=3.3 Score=41.06 Aligned_cols=63 Identities=25% Similarity=0.284 Sum_probs=46.4
Q ss_pred hhhHHHHHHHHHcCC--EEeccceeeeEEecCC-Cc-eEEEEEE-------CC--eEEecCEEEEeeChhh-HHHhhh
Q 017660 87 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEE-RC-CISDVVC-------GK--ETYSAGAVVLAVGIST-LQELIK 150 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~-~g-~v~~v~~-------~g--~~~~ad~VV~a~p~~~-l~~ll~ 150 (368)
.|.+.|.+.+++.|+ +|+++++|++|..+++ ++ .|+ |++ +| ++++||+||.|.+... +.+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 577788888999887 9999999999988652 11 343 432 34 4789999999999865 445554
No 87
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.84 E-value=0.05 Score=52.60 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=46.2
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |..+ |+++++|.||++++...
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~-v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG--AGVL-VTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSEE-EEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEEE-EEECCCcEEEcCEEEECCCCCc
Confidence 34577888889999999999999999998765 4453 5554 66899999999998753
No 88
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.79 E-value=0.038 Score=51.93 Aligned_cols=56 Identities=16% Similarity=0.222 Sum_probs=45.7
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.+.+.++++|++|+++++|++|..++ ++.+|.+. |+++.||.||++++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCee
Confidence 4567778888999999999999999997643 34567775 77899999999998853
No 89
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.78 E-value=0.06 Score=52.72 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=47.0
Q ss_pred hhhHHHHHHHHHc-CCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
.+.+.|.+.+++. |++|+++ +|++|..+++ |.+++|.+. |++++||.||.|.+...
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCch
Confidence 4888899999888 9999999 9999987654 666677776 66899999999999854
No 90
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=94.77 E-value=0.055 Score=53.54 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=47.6
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~-g~--~~~ad~VV~a~p~~~ 144 (368)
..+...|.+.+++.|++|+++++|++|..+++ |+|++|.+ . |+ ++.|+.||+|++...
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 46889999999999999999999999998633 77888764 2 44 589999999998754
No 91
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.74 E-value=0.057 Score=50.17 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=45.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.+. |++++||.||++++...
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGL-EAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECcCCCc
Confidence 4577888899999999999999999998765 444 45665 67899999999998753
No 92
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=94.69 E-value=0.064 Score=53.78 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=47.7
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~-g~--~~~ad~VV~a~p~~~ 144 (368)
..+...|.+.+++.|++|+.+++|++|..++ |+|.+|.+ . |+ .+.|+.||+|++...
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4688999999998999999999999999866 77888765 2 44 489999999998754
No 93
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=94.68 E-value=0.053 Score=53.96 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=48.0
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~~ 144 (368)
..+...|.+.+++.|++|+.+++|++|..++ |+|.+|.+ +|+ .+.|+.||+|++...
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 4688999999988999999999999999876 78888765 254 689999999998754
No 94
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.66 E-value=0.078 Score=50.69 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=46.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.+.+.+++.|++|+++++|++|..++ +. ..|.++++++++|.||++++...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GE-FVLTTTHGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEET--TE-EEEEETTEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CE-EEEEECCcEEEcCEEEECCCCCc
Confidence 4578888889999999999999999998755 43 45777788899999999998753
No 95
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=94.66 E-value=0.073 Score=51.48 Aligned_cols=56 Identities=20% Similarity=0.134 Sum_probs=46.6
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
.+.+.|.+.+++.|++|+.+ +|++|..+++ +.+++|++. |++++||.||.|.+...
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcch
Confidence 57788888888899999999 9999988654 666677776 55899999999999864
No 96
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.66 E-value=0.056 Score=51.99 Aligned_cols=56 Identities=25% Similarity=0.300 Sum_probs=46.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.+. |+++.+|.||++++..
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 34578888889999999999999999998776 445 46665 6689999999999874
No 97
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.52 E-value=0.067 Score=51.63 Aligned_cols=55 Identities=16% Similarity=0.159 Sum_probs=45.2
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.++++|++|+++++|++|..++ +++ .|.+. |+++.||.||++++..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCC
Confidence 4567778888999999999999999998665 554 46665 7789999999999875
No 98
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.47 E-value=0.06 Score=51.43 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=46.2
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEE-EC-CeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-CG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~-~~-g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +. ..|. ++ |+ +.+|.||++++...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD-GR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 456788888999999999999999999988753 43 3566 65 55 99999999998743
No 99
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.44 E-value=0.079 Score=47.05 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEE----------CC-----eEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----------GK-----ETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~----------~g-----~~~~ad~VV~a~p~~ 143 (368)
.+...|.+.+.+ .|++|+++++|++|..++ +++.+|.+ ++ .+++||.||.|++..
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 466677777765 699999999999999876 66777765 22 578999999999864
No 100
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.43 E-value=0.054 Score=52.20 Aligned_cols=56 Identities=20% Similarity=0.356 Sum_probs=46.3
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|.. + +++..|.++|+++.+|.||++++..
T Consensus 235 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~--~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 235 DRDLTDLMAKNMEEHGIQLAFGETVKEVAG-N--GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp CHHHHHHHHHHHHTTTCEEEETCCEEEEEC-S--SSCCEEEESSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C--CcEEEEEECCcEEECCEEEECCCCC
Confidence 455778888889999999999999999985 3 4455566788899999999999874
No 101
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=94.42 E-value=0.065 Score=48.63 Aligned_cols=57 Identities=16% Similarity=0.031 Sum_probs=46.6
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.+.+.+++.|++++++++|++|..++ +++.+|.++++++++|+||+|++...
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCCEEEeCEEEECCCCCC
Confidence 3577888888888999999999999999876 54433777766999999999999743
No 102
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.40 E-value=0.072 Score=51.45 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=45.8
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.++++|++|+++++|++|..+++ +. ..|.+. |+++++|.||++++..
T Consensus 234 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~-~~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 234 DETIREEVTKQLTANGIEIMTNENPAKVSLNTD-GS-KHVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT-SC-EEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ce-EEEEECCCcEEEcCEEEECCCCc
Confidence 345778888899999999999999999987653 33 346665 6689999999999864
No 103
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.34 E-value=0.08 Score=50.85 Aligned_cols=58 Identities=10% Similarity=0.073 Sum_probs=45.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C-eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g-~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +++..|.+. | +++.+|.||++++..
T Consensus 225 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 225 DECIQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTIGRK 284 (479)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECCCCC
Confidence 345778888889999999999999999987543 423346665 6 689999999999863
No 104
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.29 E-value=0.07 Score=51.46 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=45.9
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.++++|++|+++++|++|..+++ +.+ .|.+. |+++++|.||++++..
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNAD-GTR-HVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEE-EEEECCCcEEEcCEEEEccCCC
Confidence 345778888899999999999999999987653 333 46665 6689999999999874
No 105
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.26 E-value=0.066 Score=51.86 Aligned_cols=63 Identities=13% Similarity=0.094 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHcC-CEEeccceeeeEEecCCCceEEEEEE---CC-----eEEecCEEEEeeChhhHHHhhh
Q 017660 88 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELIK 150 (368)
Q Consensus 88 L~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~g~v~~v~~---~g-----~~~~ad~VV~a~p~~~l~~ll~ 150 (368)
...++.+.++++| ++|+++++|++|..+++++++++|++ +| .++.|+.||++++.-...+||-
T Consensus 223 ~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 223 LDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp TTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 3444445555665 89999999999999853147888876 35 2688999999999976665543
No 106
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.20 E-value=0.12 Score=49.54 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=47.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..+ ++++.+.++++++++|.||++++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEETTEEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEECCCEEEcCEEEECcCCCc
Confidence 3457788888999999999999999999754 44666777778899999999998753
No 107
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.16 E-value=0.059 Score=50.23 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHc-CCEEeccceeeeEEecCCCceEE-EEEEC-CeEEecCEEEEeeChhhH-HHhh
Q 017660 87 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVCG-KETYSAGAVVLAVGISTL-QELI 149 (368)
Q Consensus 87 ~L~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~g~v~-~v~~~-g~~~~ad~VV~a~p~~~l-~~ll 149 (368)
.|.+.|.+.+++. |++|+++++|++|..++ ++|+ .|++. |++++||.||.|.+.... .+.+
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 172 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRL 172 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCCCEEECCEEEECCCCChHHHHHh
Confidence 5788888888887 89999999999999876 4453 46665 668999999999998653 4444
No 108
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=94.05 E-value=0.1 Score=49.67 Aligned_cols=57 Identities=21% Similarity=0.203 Sum_probs=46.3
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .+.+. |+++++|.||+|++...
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGA-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCCeEEEcCEEEECcCCCc
Confidence 34578888889999999999999999998766 444 35554 67899999999998753
No 109
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=93.92 E-value=0.12 Score=50.36 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=47.0
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
..|.+.|.+.+++.|++++.+ +|++|..+++ |.++.|.+. |++++||.||.|.+...
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCch
Confidence 358888888898899999999 8999988654 656667776 55899999999999864
No 110
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.81 E-value=0.11 Score=49.32 Aligned_cols=57 Identities=11% Similarity=0.180 Sum_probs=45.5
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|.+. |+++++|.||++++..
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 207 DPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GSL-TLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp CHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred hHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cEE-EEEECCCcEEEcCEEEECCCCC
Confidence 345778888889999999999999999987653 433 46665 6689999999998764
No 111
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=93.75 E-value=0.11 Score=49.87 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=46.5
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--CeEEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g~~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++.|++|+.+++| +|..++ ++|.+|.+. ++++.||.||+|++...
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 458889998888889999999999 998876 778777663 45688999999998754
No 112
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=93.74 E-value=0.096 Score=50.76 Aligned_cols=61 Identities=15% Similarity=0.142 Sum_probs=45.3
Q ss_pred hhHHHHHHHHHcC-CEEeccceeeeEEecCCCc-eEEEEEE---CC-----eEEecCEEEEeeChhhHHHhh
Q 017660 88 IFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERC-CISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 149 (368)
Q Consensus 88 L~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~g-~v~~v~~---~g-----~~~~ad~VV~a~p~~~l~~ll 149 (368)
...++.+.++++| ++|+++++|++|..+++ + ++++|.. +| .++.|+.||++++.-...+||
T Consensus 228 ~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~-g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 228 LDKTYLAQAAATGKLTITTLHRVTKVAPATG-SGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp TTTTHHHHHHHTTCEEEECSEEEEEEEECSS-SSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 3444445555554 89999999999999764 4 6888876 34 267899999999997666554
No 113
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=93.42 E-value=0.1 Score=49.57 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=46.3
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..+ ++++.|.++++++++|.||++++...
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGD---GRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEECCCEEECCEEEECcCCCC
Confidence 3457788888899999999999999999754 33545667777899999999998743
No 114
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.39 E-value=0.13 Score=50.91 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=47.3
Q ss_pred hhhhHHHHHHHHHcC-CEEeccceeeeEEecCCCceEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---G-KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~g~v~~v~~---~-g~--~~~ad~VV~a~p~~~ 144 (368)
..+...|.+.+++.| ++|+++++|++|..++ ++|++|.+ . |+ .+.|+.||+|++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 468899999998888 9999999999999876 77777753 2 55 689999999998754
No 115
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=93.35 E-value=0.13 Score=46.98 Aligned_cols=55 Identities=11% Similarity=0.046 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---CC--eEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g--~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+ +| +++.+|.||++++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 366777777888899999999999998765 66666665 45 478999999999864
No 116
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.32 E-value=0.16 Score=48.94 Aligned_cols=57 Identities=12% Similarity=0.131 Sum_probs=45.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeE-EecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KET-YSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~-~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|.++ |++ +.+|.||++++..
T Consensus 216 d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 216 DESVINVLENDMKKNNINIVTFADVVEIKKVSD-KNL-SIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEESST-TCE-EEEETTSCEEEEESEEEECCCBC
T ss_pred chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceE-EEEECCCcEEEECCEEEECCCCC
Confidence 345778888899999999999999999987543 433 45554 666 9999999999864
No 117
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=93.29 E-value=0.15 Score=45.95 Aligned_cols=53 Identities=9% Similarity=0.026 Sum_probs=40.4
Q ss_pred hHHHHHHHHHc-CCEEeccceeeeEEecCCCceEEEEEEC----C--eEEecCEEEEeeChh
Q 017660 89 FEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 89 ~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g--~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+. |++|+++++|++|..++ +++.+|++. | +++.+|.||++++..
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 45566667665 99999999999998766 556666653 2 478999999998863
No 118
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=93.23 E-value=0.2 Score=47.90 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=44.5
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-CC---eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~g---~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++. +.+ ++ +++.+|.||++++..
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQVT-VKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEE-EEEESSSEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEE-EEEEeCCCcEEEECCEEEEeeCCc
Confidence 35578888888999999999999999998766 4444 443 33 578999999999874
No 119
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=93.17 E-value=0.15 Score=50.49 Aligned_cols=54 Identities=19% Similarity=0.163 Sum_probs=45.5
Q ss_pred hhhHHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+...|.+.+++ .|++| ++++|++|..++ ++|++|.+. |.++.||.||+|++..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCC
Confidence 477888888888 48999 578999998876 778888886 6689999999999975
No 120
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=93.05 E-value=0.2 Score=47.86 Aligned_cols=56 Identities=18% Similarity=0.118 Sum_probs=45.1
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce-EEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE-TYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~-~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.+. |+ ++++|.||++++..
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA--QGT-TLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET--TEE-EEEETTCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeE-EEEEeCCcEEEEcCEEEECCCCC
Confidence 34577888888999999999999999998765 333 46664 66 79999999998764
No 121
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=93.05 E-value=0.18 Score=49.33 Aligned_cols=58 Identities=14% Similarity=0.281 Sum_probs=45.1
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEec------------------CCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~------------------~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|++++.|++|..+ .+ +++..+..+|++++||.||++++..
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEEEEEcCCCEEEcCEEEECcCCc
Confidence 3457778888899999999999999999873 22 5554333347789999999999874
No 122
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.00 E-value=0.23 Score=48.29 Aligned_cols=56 Identities=13% Similarity=0.190 Sum_probs=45.5
Q ss_pred hhhHHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
.|.+.|.+.+++ .|++|+.+ .|++|..+++ +.++.|.+. |++++||.||.|.+...
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcch
Confidence 577888888888 89999999 5999988654 555567765 56899999999999864
No 123
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.95 E-value=0.34 Score=47.29 Aligned_cols=79 Identities=13% Similarity=0.105 Sum_probs=50.7
Q ss_pred HHHHHHHHhhhccCCCCCc-eeeeEEeecCCCccccCCCCcCCCCCCCC-CCCceEEeccccccCCCCccchHHhHHHHH
Q 017660 239 VAKAVSYLSKCIKDFSTAT-VMDHKIRRFPKSLTHFFPGSYKYMMRGFT-SFPNLFMAGDWITTRHGSWSQERSYVTGLE 316 (368)
Q Consensus 239 ~~~~~~~l~~~~p~~~~~~-i~~~~~~~~~~~~~~~~pg~~~~~p~~~~-~~~~L~laGd~~~~~~~~~~~egA~~Sg~~ 316 (368)
+.+.+..+.+..|++...+ ++..-. .+.+-+.-.+- .....+ .++|||.|||.. ||. +++..|..+|..
T Consensus 463 l~e~~~~~~~~~~g~~~~~~~l~g~e--~~~ssp~ri~~----~~~~~~~~~~gly~~Gega--G~a-~gi~~Aa~~G~~ 533 (549)
T 3nlc_A 463 IREAIPAFDRKIKGFASEDGLLTGVE--TRTSSPVCIKR----GKDFQSVNLKGFYPAGEGA--GYA-GGILSAGIDGIK 533 (549)
T ss_dssp HHHHHHHHHTTSTTTTCTTCEEEEEE--CCSSCSEECCC----TTTTSCTTCBTEEECHHHH--TSC-CSHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCCCCCcEEEEEe--eccCCceeEEE----CCCceECCcCCEEEccccC--Chh-hHHHHHHHHHHH
Confidence 4456777888889886432 221111 22211100000 022334 689999999998 777 788999999999
Q ss_pred HHHHHHHHhC
Q 017660 317 AANRVVDYLG 326 (368)
Q Consensus 317 aA~~Il~~~~ 326 (368)
||+.|++.+.
T Consensus 534 ~a~~i~~~~~ 543 (549)
T 3nlc_A 534 VAEAVARDIV 543 (549)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998875
No 124
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.91 E-value=0.18 Score=46.13 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.+.++++.+|+||+|++...
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADD--AYY-TIATTTETYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSE-EEEESSCCEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeE-EEEeCCCEEEeCEEEECCCCCC
Confidence 466677777888899999999999999876 333 4666655799999999999864
No 125
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.87 E-value=0.23 Score=44.49 Aligned_cols=52 Identities=17% Similarity=0.334 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChh
Q 017660 90 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 90 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~ 143 (368)
..+.+.+++.|++|+++++|++|..++ +++.+|.+ +|+ ++.+|.||++++..
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 456667778899999999999998764 54555654 354 68999999988753
No 126
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.78 E-value=0.28 Score=46.73 Aligned_cols=56 Identities=13% Similarity=0.119 Sum_probs=44.6
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--C--Ce--EEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~--g~--~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++. |.+ + |+ ++.+|.||++++..
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGLH-VRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTCCSCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEEE-EEEeecCCCceeEEEcCEEEECCCcc
Confidence 34577788888999999999999999998765 4443 444 4 65 79999999998764
No 127
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=92.74 E-value=0.17 Score=50.33 Aligned_cols=55 Identities=20% Similarity=0.158 Sum_probs=45.6
Q ss_pred hhhHHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
.+...|.+.+++ .|++| ++++|++|..++ ++|++|.+. |.++.||.||+|++...
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 477888888888 58999 678999998876 678888886 66899999999999853
No 128
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.69 E-value=0.28 Score=46.77 Aligned_cols=57 Identities=16% Similarity=0.282 Sum_probs=43.6
Q ss_pred chhhhHHHHHHH-HHcCCEEeccceeeeEEecCCCceEEEEEE---CC--eEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l-~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g--~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+ ++.|++|+++++|++|..++ +++. |.+ +| +++.+|.||++++...
T Consensus 214 d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 214 DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG--DSVS-LEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS--SSEE-EEEECC---EEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC--CeEE-EEEEcCCCceEEEECCEEEECCCccc
Confidence 345778888889 99999999999999998765 3343 443 35 5799999999998753
No 129
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.65 E-value=0.19 Score=45.10 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=45.6
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeCh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 142 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~ 142 (368)
+.+...+.+.+++.|.+++++++|++|..+++ +. +.|.++++++.+|+||+|++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~~v~~~~g~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD-GV-FKLVTNEETHYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-SC-EEEEESSEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-Cc-EEEEECCCEEEeCEEEECCCC
Confidence 45778888888888999999999999998763 33 457777666999999999998
No 130
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=92.50 E-value=0.26 Score=46.19 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=42.7
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-CCeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.++++|++|+++++|++|. + +. |.+ +|+++++|.||++++..
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~~---v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D--GV---VLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T--TE---EEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--CE---EEECCCCEEEcCEEEECcCCC
Confidence 34577888888999999999999999998 3 52 444 47789999999999875
No 131
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=92.43 E-value=0.13 Score=50.19 Aligned_cols=58 Identities=19% Similarity=0.223 Sum_probs=43.6
Q ss_pred hhhhHHHHHHHHH-cCCEEeccceeeeEEecCCCc------eEEEEEE----CCe--EEecCEEEEeeChhh
Q 017660 86 EKIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERC------CISDVVC----GKE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 86 ~~L~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g------~v~~v~~----~g~--~~~ad~VV~a~p~~~ 144 (368)
..+.+.|.+.+++ .|++|+++++|++|..+++ + +|++|.+ +|+ ++.|+.||+|++...
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3577888888888 6999999999999998432 5 7877765 254 689999999998754
No 132
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=92.37 E-value=0.34 Score=46.14 Aligned_cols=56 Identities=14% Similarity=0.244 Sum_probs=44.2
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--CC--eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g--~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.++++|++|+++++|++|..++ +++. +.+ +| +++.+|.||++++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 211 DADVSKEIEKQFKKLGVTILTATKVESIADGG--SQVT-VTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCEEEEEEECS--SCEE-EEEESSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeEE-EEEEcCCceEEEEcCEEEECCCCC
Confidence 34577788888999999999999999998765 4443 443 45 579999999998864
No 133
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=92.32 E-value=0.29 Score=46.75 Aligned_cols=57 Identities=18% Similarity=0.258 Sum_probs=44.6
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE------CCeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~------~g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .+.+ +++++++|.||++++..
T Consensus 219 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 219 DMEISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 455778888899999999999999999987653 324 3442 25689999999999875
No 134
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.22 E-value=0.24 Score=43.92 Aligned_cols=48 Identities=13% Similarity=0.213 Sum_probs=37.5
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEE---CCe--EEecCEEEEeeChh
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~a~p~~ 143 (368)
+.+++.|++|+++++|++|..++ +++.+|++ +|+ ++.+|.||++++..
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred HHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 34567899999999999998766 56766665 354 78999999998863
No 135
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=92.22 E-value=0.3 Score=46.39 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=44.1
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--C--CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~--g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++. +.+ + ++++++|.||++++..
T Consensus 210 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 210 EKQMAAIIKKRLKKKGVEVVTNALAKGAEERE--DGVT-VTYEANGETKTIDADYVLVTVGRR 269 (455)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeEE-EEEEeCCceeEEEcCEEEECcCCC
Confidence 34577888888999999999999999998765 4443 443 2 3579999999999875
No 136
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=92.17 E-value=0.21 Score=47.90 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=44.8
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-C----CeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----KETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~----g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.+ + |+++.+|.||++++...
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~-~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGV-YVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET--TEE-EEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeE-EEEEeccCCCceEEEcCEEEECcCCCc
Confidence 35577888888999999999999999998765 433 3444 3 55789999999998753
No 137
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=92.12 E-value=0.29 Score=46.90 Aligned_cols=57 Identities=19% Similarity=0.161 Sum_probs=43.9
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C-----eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-----ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g-----~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ +++. |.+. + .++.+|.||++++..
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~-v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDD-GKLL-VKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCEE-EEEEETTTCCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcEE-EEEecCCCCceeEEEcCEEEECcccc
Confidence 345778888889999999999999999987653 5443 4432 2 278999999998874
No 138
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=91.95 E-value=0.3 Score=44.98 Aligned_cols=57 Identities=14% Similarity=0.145 Sum_probs=45.3
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhH-HHhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL-QELI 149 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l-~~ll 149 (368)
.|.+.|.+.+++.|++|+++++|++|.. + + .|++. |++++||.||.|.+.... .+.+
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l 166 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V--G---RLTLQTGEVLEADLIVGADGVGSKVRDSI 166 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T--T---EEEETTSCEEECSEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C---EEEECCCCEEEcCEEEECCCccHHHHHHh
Confidence 4778888888889999999999999986 3 6 24554 678999999999998643 3443
No 139
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.84 E-value=0.44 Score=42.79 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=42.0
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CC--eEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|++|++++.|++|..+ +++..|.+ +| +++.+|.||++++..
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 46677777788889999999999999863 33445554 45 478999999998864
No 140
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.81 E-value=0.5 Score=45.14 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=44.7
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCc-eEEEEEEC----C----eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-CISDVVCG----K----ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g-~v~~v~~~----g----~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..+++ + ++ .|.+. | +++.+|.||++++..
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS-SEEE-EEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEE-EEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 355778888889999999999999999987654 5 33 35553 1 578999999999864
No 141
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=91.80 E-value=0.15 Score=49.16 Aligned_cols=58 Identities=12% Similarity=0.017 Sum_probs=43.5
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CC--eEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~a~p~~~ 144 (368)
.+.+.|.+.+++.|++|+++++|++|..+++++..+.|.+ +| .+++||.||.|.+...
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 4667788888888999999999999987521022244555 34 3789999999999864
No 142
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=91.74 E-value=0.32 Score=48.57 Aligned_cols=56 Identities=18% Similarity=0.243 Sum_probs=46.0
Q ss_pred hhhHHHHHHHHHc-CC-EEeccceeeeEEecCCCc---eEEEEEE---C-Ce--EEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEERC---CISDVVC---G-KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~-G~-~i~~~t~V~~I~~~~~~g---~v~~v~~---~-g~--~~~ad~VV~a~p~~~ 144 (368)
.+...|.+.+++. |+ +|+++++|++|..++ + +|++|.+ . |+ .+.|+.||+|++...
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN--NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT--TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC--CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 5778888888887 99 999999999999875 5 8888764 2 44 689999999988754
No 143
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.69 E-value=0.38 Score=45.99 Aligned_cols=56 Identities=18% Similarity=0.273 Sum_probs=43.6
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEe--cCCCceEEEEEEC------CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG------KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~--~~~~g~v~~v~~~------g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|.. ++ +. ..|.+. ++++.+|.||++++..
T Consensus 223 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~-~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 223 DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK--NV-VEIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT--TE-EEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC--Ce-EEEEEEEcCCCCceEEECCEEEECCCCC
Confidence 345778888899999999999999999986 33 33 345442 3579999999999864
No 144
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.65 E-value=0.45 Score=45.64 Aligned_cols=56 Identities=20% Similarity=0.234 Sum_probs=44.5
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC----C--eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g--~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +.+. |.+. | +++.+|.||++++..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGAK-VTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEEE-EEEEecCCCceEEEEcCEEEEeeCCc
Confidence 45578888889999999999999999998776 4443 4332 4 579999999999864
No 145
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=91.65 E-value=0.28 Score=48.36 Aligned_cols=54 Identities=13% Similarity=0.164 Sum_probs=44.2
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +. |.+. |+++.+|.||++++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~---v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG--AV---VRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--TE---EEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC--CE---EEECCCCEEEcCEEEEccCCC
Confidence 45678888899999999999999999997654 43 3444 7789999999999864
No 146
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=91.33 E-value=0.31 Score=47.51 Aligned_cols=56 Identities=30% Similarity=0.331 Sum_probs=45.3
Q ss_pred hhhHHHHHHHHHcCC--EEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|. +|+++++|+++..+++ ++.+.|.++ |++++||+||+|++..
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-TTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-CCEEEEEEcCCCEEEeCEEEECCccc
Confidence 477778888888887 8999999999998764 334567776 6689999999999963
No 147
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.24 E-value=0.33 Score=47.42 Aligned_cols=56 Identities=23% Similarity=0.125 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHcCC--EEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|. +|+++++|+++..+++ ++.+.|.++ |++++||.||+|++..
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE-GLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT-TTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC-CCEEEEEECCCCEEEeCEEEECcCCC
Confidence 466777777888887 8999999999998764 334567776 6689999999999953
No 148
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=91.23 E-value=0.43 Score=46.01 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce---EEecCEEEEeeChhh-HHHhhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE---TYSAGAVVLAVGIST-LQELIK 150 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~---~~~ad~VV~a~p~~~-l~~ll~ 150 (368)
.|.+.|.+.+++.|++|+++++|++|..++ ++|+ |++. ++ +++||.||.|-+... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEG--DHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 477888888888899999999999999876 4465 5543 32 799999999998865 445543
No 149
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=91.14 E-value=0.46 Score=45.82 Aligned_cols=61 Identities=16% Similarity=0.096 Sum_probs=47.1
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce---EEecCEEEEeeChhh-HHHhhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE---TYSAGAVVLAVGIST-LQELIK 150 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~---~~~ad~VV~a~p~~~-l~~ll~ 150 (368)
.|.+.|.+.+++.|++|+++++|++|..++ ++|+ |++. ++ +++||.||.|-+... +.+.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 477788888888899999999999999877 4565 5543 32 799999999998864 344443
No 150
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.01 E-value=0.42 Score=45.54 Aligned_cols=57 Identities=16% Similarity=0.233 Sum_probs=44.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CC--eEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|+++++|++|..++ +++. +.+ +| +++.+|.||++++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGVK-LTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS--SSEE-EEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeEE-EEEEecCCCcceEEECCEEEECCCCCc
Confidence 34577888889999999999999999998655 3343 443 34 5799999999998753
No 151
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=90.81 E-value=0.34 Score=46.82 Aligned_cols=57 Identities=12% Similarity=0.072 Sum_probs=42.8
Q ss_pred CcchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C----eEEecCEEEEeeCh
Q 017660 83 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K----ETYSAGAVVLAVGI 142 (368)
Q Consensus 83 G~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g----~~~~ad~VV~a~p~ 142 (368)
.+.+.+.+.+.+.++++|++|+++++|++|.-+ +.+..+... | +++.||.||.|++.
T Consensus 269 ~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 269 MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CCCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 456778888999999999999999999998532 322223332 3 46999999999875
No 152
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=90.77 E-value=0.36 Score=42.88 Aligned_cols=57 Identities=11% Similarity=0.184 Sum_probs=43.7
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|++++++++|+.|..+.+++..+.|.++ |+++.+|+||+|++..
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 47777888888889999999999999765311122446665 5689999999999974
No 153
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.59 E-value=0.47 Score=42.64 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=44.4
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|.+++++++|++|..++ +. +.|.++ |+++.+|+||+|++..
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~-~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREG--DL-FKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEET--TE-EEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECC--CE-EEEEECCCCEEEeCEEEECCCCC
Confidence 3477788888888899999999999998876 43 346665 5689999999999974
No 154
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=90.37 E-value=0.38 Score=48.18 Aligned_cols=56 Identities=18% Similarity=0.227 Sum_probs=46.0
Q ss_pred hhhhHHHHHHHHHc--CCEEeccceeeeEEecCCCc---eEEEEEE----CCe--EEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTR--GCEFLDGRRVTDFIYDEERC---CISDVVC----GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~--G~~i~~~t~V~~I~~~~~~g---~v~~v~~----~g~--~~~ad~VV~a~p~~ 143 (368)
..+...|.+.++++ |++|+.++.|++|..++ + +|.+|.. +|+ .+.|+.||+|++-.
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~--~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~ 232 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLDK--NTPNRIAGAVGFNLRANEVHIFKANAMVVACGGA 232 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEECS--SSTTBEEEEEEEESSSSCEEEEECSEEEECCCCB
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeC--CccceEEEEEEEEcCCCcEEEEEeCEEEECCCcc
Confidence 35888899988887 99999999999999876 5 8888764 243 58999999998864
No 155
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.35 E-value=0.49 Score=43.12 Aligned_cols=56 Identities=14% Similarity=0.232 Sum_probs=44.9
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|.+++++++|++|..+++ +.+ .|.+. |+++.+|+||+|++..
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDD-GTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceE-EEEECCCcEEEeeEEEEccCCC
Confidence 35777888888888999999999999998653 343 46665 5689999999999874
No 156
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=90.17 E-value=0.42 Score=42.91 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=43.3
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|+++++++ |++|..++ +.+ .|.++++++++|.||+|++..
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~-~v~~~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS--KPF-KLFTDSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS--SSE-EEECSSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEE-EEEECCcEEEcCEEEECCCCC
Confidence 577888888888999999997 99998765 434 355577889999999999985
No 157
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=90.12 E-value=0.21 Score=50.34 Aligned_cols=56 Identities=11% Similarity=0.061 Sum_probs=40.3
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
.+...+.+.+++.|++|+++++|++|..++ ..+..+..+ ++++.||.||++++...
T Consensus 568 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 568 FEVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp TCHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred hhHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCCC
Confidence 356778888999999999999999997432 222211122 34799999999998753
No 158
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.05 E-value=0.44 Score=47.33 Aligned_cols=54 Identities=17% Similarity=0.092 Sum_probs=44.3
Q ss_pred hhhHHHHHHHHHc-CCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+...+.+.+++. |++|+ +..|+.|..++ ++|++|.+. |+++.||.||+|++..
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCC
Confidence 4677888888874 89995 56999998876 678888876 6789999999999975
No 159
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=89.96 E-value=0.38 Score=44.85 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=41.6
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|++++++++|++|. + +.| +..+|+++++|.||++++..
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~--~--~~v--~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIR--E--HEI--VDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEC--S--SEE--EETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEEC--C--CeE--EECCCCEEeeeEEEECCCCC
Confidence 4688888899999999999999999995 3 223 22347799999999998864
No 160
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.92 E-value=0.48 Score=45.16 Aligned_cols=57 Identities=14% Similarity=0.107 Sum_probs=43.0
Q ss_pred hhhhHHHHHHHHHcCCE--EeccceeeeEEecCCCceEEEEEEC----C--eEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCE--FLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~--i~~~t~V~~I~~~~~~g~v~~v~~~----g--~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|++ |+++++|++|..++++++ +.|++. | .++.||+||+|++..
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~d~VVvAtG~~ 165 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEFDYVVCCTGHF 165 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEECCCSS
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEcCEEEECCCCC
Confidence 35777788888888988 999999999998763123 445543 3 478999999999953
No 161
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=89.81 E-value=0.56 Score=41.59 Aligned_cols=51 Identities=10% Similarity=0.254 Sum_probs=38.0
Q ss_pred HHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC----Ce--EEecCEEEEeeCh
Q 017660 90 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGI 142 (368)
Q Consensus 90 ~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~--~~~ad~VV~a~p~ 142 (368)
..+.+.+++ .|++|+++++|++|..++ +++.+|.+. |+ ++.+|.||++++.
T Consensus 183 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 183 QVLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 345566676 699999999999998655 556566552 43 6899999998765
No 162
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=89.74 E-value=0.55 Score=45.76 Aligned_cols=59 Identities=14% Similarity=0.206 Sum_probs=44.6
Q ss_pred HHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC----Ce--EE---ecCEEEEeeChhhHHHhhhh
Q 017660 91 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TY---SAGAVVLAVGISTLQELIKN 151 (368)
Q Consensus 91 ~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~--~~---~ad~VV~a~p~~~l~~ll~~ 151 (368)
++.+.+.+ .|++|++++.|++|..++ +++++|.+. |+ ++ .++.||++++.....+|+..
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~ 268 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQ 268 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHH
Confidence 34454544 589999999999999976 788898874 43 33 78999999999776666543
No 163
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=89.50 E-value=0.66 Score=45.24 Aligned_cols=57 Identities=18% Similarity=0.102 Sum_probs=46.8
Q ss_pred cchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 84 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 84 ~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+...+.+.+.+.+++.|+++++++.|+++...+ +++. |... ++++.+|.|++|++-.
T Consensus 261 ~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~-v~~~~~~~~~~D~vLvAvGR~ 318 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKIL-VEFSDKTSELYDTVLYAIGRK 318 (542)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEE-EEETTSCEEEESEEEECSCEE
T ss_pred cchhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEE-EEEcCCCeEEEEEEEEccccc
Confidence 345688889999999999999999999999877 5554 5555 6688999999998764
No 164
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=89.50 E-value=0.9 Score=43.49 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=43.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-C---Ce--EEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~---g~--~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|++++.|++|...++ +.+. |.+ + |+ ++.+|.||++++..
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQLQ-VTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEE-EEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEE-EEEEeCCCCeeEEEECCEEEEcccCC
Confidence 355778888889999999999999999987543 4443 333 2 44 47999999999864
No 165
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=89.46 E-value=0.26 Score=45.78 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeCh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 142 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~ 142 (368)
+.....+.+++.|++++++++|++|..++ .. |+++ |+++.+|++|+|++.
T Consensus 64 l~~~~~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 64 ILIKKNDWYEKNNIKVITSEFATSIDPNN--KL---VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp TBSSCHHHHHHTTCEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEecCC
Confidence 44445566778899999999999998765 43 4454 779999999999996
No 166
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=89.30 E-value=0.52 Score=46.00 Aligned_cols=56 Identities=16% Similarity=0.117 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHHcCC--EEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~--~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|. +|+++++|+++..+++ ++.+.|.++ |++++||.||+|++..
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN-DRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG-GTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC-CCEEEEEECCCCEEEeCEEEECcCCC
Confidence 466777777787776 8999999999998764 334567776 6789999999999954
No 167
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=88.98 E-value=0.43 Score=45.88 Aligned_cols=48 Identities=17% Similarity=0.261 Sum_probs=39.0
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
+.++++|++|++++.|++|..++ ++..|.+. |+++.+|.||++++...
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~---~v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNE---KVERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSS---SCCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHhCCcEEEeCCeeEEEecCC---ceEEEEeCCCeEEEeCEEEECCCcCc
Confidence 67888999999999999997543 35556665 67899999999998753
No 168
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=88.94 E-value=0.36 Score=47.18 Aligned_cols=52 Identities=21% Similarity=0.313 Sum_probs=40.9
Q ss_pred HcCCEEeccceeeeEEecCCCceEEEEEEC----Ce--EEecC-EEEEeeChhhHHHhhh
Q 017660 98 TRGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAG-AVVLAVGISTLQELIK 150 (368)
Q Consensus 98 ~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~--~~~ad-~VV~a~p~~~l~~ll~ 150 (368)
+.|++|++++.|++|..+++ +++++|.+. |+ ++.|+ .||+|++.....+|+.
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~ 279 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLM 279 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhh
Confidence 56899999999999998764 678888762 33 68998 8999999865555654
No 169
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=88.61 E-value=1.4 Score=41.73 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=38.5
Q ss_pred hhhhHHHHHHHHH------cCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRT------RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~------~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~ 143 (368)
..++..+.+.+.. .|++|+++++|++|..++ +++ .|.+ +|+ ++++|.||+|++..
T Consensus 310 ~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 310 TDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGI-ELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEE-EEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEE-EEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 3444555444332 589999999999998766 443 3444 344 48999999999975
No 170
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=88.47 E-value=0.67 Score=43.84 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=45.1
Q ss_pred cchhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 84 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 84 ~~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
+...+.+.+.+.+++. +++++++.|++|..++ ++..+..+++++.+|.||++++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCc
Confidence 3456777888888888 9999999999997543 354566778899999999999875
No 171
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.41 E-value=0.76 Score=43.43 Aligned_cols=55 Identities=15% Similarity=-0.141 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC----Ce---EEecCEEEEeeChhh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----KE---TYSAGAVVLAVGIST 144 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~---~~~ad~VV~a~p~~~ 144 (368)
.+.+.+.+.+++.+.+|+++++|++|..++ +++ .|++. |+ ++.||+||+|++...
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSW-VVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEE-EEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeE-EEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 466677777777788899999999998766 543 34442 55 789999999999743
No 172
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=88.39 E-value=1.1 Score=42.87 Aligned_cols=55 Identities=22% Similarity=0.131 Sum_probs=43.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---CC--eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g--~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++. ++|+++++|++|..++ +++. +.+ +| +++.+|.||++++..
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 345777788888877 9999999999998776 4454 444 46 579999999999874
No 173
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.37 E-value=0.83 Score=40.45 Aligned_cols=54 Identities=19% Similarity=0.298 Sum_probs=42.4
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|+++++ ++|++|..++ +.+ .|.+. |+++++|.||+|++..
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~-~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SHF-VILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEET--TEE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CEE-EEEEcCCCEEECCEEEECCCCC
Confidence 35777788888888999998 7999998876 443 35444 6789999999999964
No 174
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=88.26 E-value=1.1 Score=39.54 Aligned_cols=51 Identities=18% Similarity=0.187 Sum_probs=37.4
Q ss_pred HHHHHHHH-HcCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeCh
Q 017660 90 EPWMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 142 (368)
Q Consensus 90 ~~l~~~l~-~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~ 142 (368)
..+.+.+. +.|++|+++++|++|..++ +++.+|.+ +|+ ++.+|.||++++.
T Consensus 182 ~~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 182 PITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 34555565 4699999999999998765 45555554 354 6899999998875
No 175
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=88.21 E-value=0.83 Score=42.30 Aligned_cols=58 Identities=10% Similarity=0.098 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhH-HHhhh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL-QELIK 150 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l-~~ll~ 150 (368)
|.+.|.+.+ .|++|+++++|++|..++ ++++ |++. |++++||.||.|.+.... .+.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECS--SCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 444444443 389999999999999876 4454 6665 668999999999998643 44443
No 176
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=88.07 E-value=1.2 Score=40.56 Aligned_cols=57 Identities=16% Similarity=0.263 Sum_probs=42.5
Q ss_pred hhhHHHHHHHHH-cCCEEeccceeeeEEecCC-----------------CceEEEEEEC-------C--------eEEec
Q 017660 87 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEE-----------------RCCISDVVCG-------K--------ETYSA 133 (368)
Q Consensus 87 ~L~~~l~~~l~~-~G~~i~~~t~V~~I~~~~~-----------------~g~v~~v~~~-------g--------~~~~a 133 (368)
.+.+.|.+.+++ .|++|+.++.|++|..+++ ..+|.+|.++ + .+++|
T Consensus 161 d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~A 240 (344)
T 3jsk_A 161 LFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINA 240 (344)
T ss_dssp HHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEEC
T ss_pred HHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEc
Confidence 355777787877 4999999999999987651 0267777651 2 36889
Q ss_pred CEEEEeeChh
Q 017660 134 GAVVLAVGIS 143 (368)
Q Consensus 134 d~VV~a~p~~ 143 (368)
++||.|++..
T Consensus 241 k~VV~ATG~~ 250 (344)
T 3jsk_A 241 PVIISTTGHD 250 (344)
T ss_dssp SEEEECCCSS
T ss_pred CEEEECCCCC
Confidence 9999998875
No 177
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=88.03 E-value=0.72 Score=40.90 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=42.7
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|+++++ ++|++|..++ +++ .|.++ ++++.+|+||+|++..
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRG--DEF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecC--CEE-EEEECCCCEEEcCEEEECcCCC
Confidence 35777888888888999999 9999998876 443 46666 5789999999999876
No 178
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=87.68 E-value=0.3 Score=46.04 Aligned_cols=51 Identities=8% Similarity=-0.038 Sum_probs=38.5
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-C--CeEEecCEEEEeeCh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G--KETYSAGAVVLAVGI 142 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~--g~~~~ad~VV~a~p~ 142 (368)
.+.+.+.+.+++.|++|+++++|++|. + ++++ +.. + ++++.+|.||++.+.
T Consensus 201 ~~~~~l~~~l~~~GV~i~~~~~v~~v~--~--~~v~-~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 201 ASKRLVEDLFAERNIDWIANVAVKAIE--P--DKVI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEEC--S--SEEE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEe--C--CeEE-EEecCCCceEEeeeEEEECCCC
Confidence 367788888999999999999999995 3 2232 222 1 468999999998664
No 179
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=87.35 E-value=0.79 Score=40.87 Aligned_cols=50 Identities=16% Similarity=0.253 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC------CeEEecCEEEEeeCh
Q 017660 90 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG------KETYSAGAVVLAVGI 142 (368)
Q Consensus 90 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~------g~~~~ad~VV~a~p~ 142 (368)
+...+.+++.|++++++++|++|..++ + +..|.+. ++++.+|.||++++.
T Consensus 193 ~~~~~~l~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 193 EHSVENLHASKVNVLTPFVPAELIGED--K-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHHSSCEEETTEEEEEEECSS--S-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCeEEEeCceeeEEecCC--c-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 344556788999999999999998655 4 3344442 246899999998875
No 180
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=87.27 E-value=0.76 Score=44.50 Aligned_cols=57 Identities=9% Similarity=0.212 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|++++.+++|++|..+.+++..+.|.++ |+++.+|+||+|++..
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCC
Confidence 47778888888899999999999999764210112346665 6689999999999974
No 181
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=87.24 E-value=0.99 Score=40.32 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CCeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|+++++++ |++|..++ +.+. +.+ ++.++.+|.||+|++..
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSS--KPFK-LWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEE-EEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEE-EEEEecCCCcEEEeCEEEECcCCC
Confidence 577888888999999999999 99998776 5443 554 35689999999999874
No 182
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=87.03 E-value=1.2 Score=39.77 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=37.7
Q ss_pred HHHH-HHHHHcCCEEeccceeeeEEecCCCceEEEEEE----CC--eEEecCEEEEeeChh
Q 017660 90 EPWM-DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 90 ~~l~-~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~a~p~~ 143 (368)
..+. +.+++.|++|+++++|++|..+++.+++.+|.+ +| +++.+|.||++++..
T Consensus 198 ~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 198 KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 3444 335678999999999999986541015655554 24 478999999998763
No 183
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=86.86 E-value=1 Score=43.82 Aligned_cols=55 Identities=16% Similarity=0.028 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHcC--CEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 88 IFEPWMDSMRTRG--CEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 88 L~~~l~~~l~~~G--~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+.+.+.+.+++.+ .+|+++++|+++..+++++ .+.|.++ |++++||.||+|++..
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCCEEEeCEEEECcCCC
Confidence 5555655566655 6899999999999876423 3557776 6689999999999964
No 184
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=86.78 E-value=0.81 Score=43.45 Aligned_cols=54 Identities=22% Similarity=0.340 Sum_probs=42.7
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C--eEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g--~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|.. + + +. +..+ | +++.+|.||++++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~-v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G--C-LL-ANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T--E-EE-EECSSSCCCEECCSCEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-EE-EEECCCceEEEECCEEEECcCCC
Confidence 345778888889999999999999999975 4 4 43 4433 5 579999999999874
No 185
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=86.54 E-value=0.68 Score=45.55 Aligned_cols=55 Identities=18% Similarity=0.241 Sum_probs=42.1
Q ss_pred HHcCCEEeccceeeeEEecCC--CceEEEEEEC---Ce--EEecC-EEEEeeChhhHHHhhhh
Q 017660 97 RTRGCEFLDGRRVTDFIYDEE--RCCISDVVCG---KE--TYSAG-AVVLAVGISTLQELIKN 151 (368)
Q Consensus 97 ~~~G~~i~~~t~V~~I~~~~~--~g~v~~v~~~---g~--~~~ad-~VV~a~p~~~l~~ll~~ 151 (368)
++.+.+|++++.|++|..+.+ +++++||... |+ ++.|+ -||++++.-...+||--
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~l 300 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEY 300 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHH
Confidence 456899999999999999821 1789999863 43 57886 59999998877776543
No 186
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=86.50 E-value=1.9 Score=39.00 Aligned_cols=40 Identities=10% Similarity=0.189 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHc-CCEEeccceeeeEEecCC-C-c--eEEEEEE
Q 017660 87 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEE-R-C--CISDVVC 126 (368)
Q Consensus 87 ~L~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~-~-g--~v~~v~~ 126 (368)
.+...|.+.+.+. |++|+.+++|++|..+++ + | +|.+|.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 3567777777775 999999999999998742 1 3 7888865
No 187
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.30 E-value=1.4 Score=39.04 Aligned_cols=50 Identities=18% Similarity=0.397 Sum_probs=36.3
Q ss_pred HHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC----Ce--EEecCEEEEeeChhh
Q 017660 92 WMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGIST 144 (368)
Q Consensus 92 l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~--~~~ad~VV~a~p~~~ 144 (368)
+.+.+.+ .|++++++++|++|..++ + +..|.+. |+ ++.+|.||++++...
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK--V-VKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS--S-EEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC--c-eeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 4444444 599999999999998653 3 4455543 54 789999999998753
No 188
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=86.29 E-value=0.92 Score=42.93 Aligned_cols=56 Identities=11% Similarity=-0.054 Sum_probs=39.6
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEE--EEEEC-Ce----EEecCEEEEeeCh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS--DVVCG-KE----TYSAGAVVLAVGI 142 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~--~v~~~-g~----~~~ad~VV~a~p~ 142 (368)
.+.+.+....++.|.+|+++++|++|..++++++.+ .|.+. |+ ++.||+||+|++.
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 355566666677789999999999998762113333 24333 43 7999999999986
No 189
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=86.28 E-value=0.53 Score=42.41 Aligned_cols=42 Identities=14% Similarity=0.286 Sum_probs=30.6
Q ss_pred CCCCCceEEecccccc--C-CCC-ccchHHhHHHHHHHHHHHHHhC
Q 017660 285 FTSFPNLFMAGDWITT--R-HGS-WSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~--~-~~~-~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
.|.+||+|.|||.... + +.+ .+.-+++.||+.||+.|++.+.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4678999999997642 1 111 2445678899999999999864
No 190
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=85.50 E-value=1.4 Score=39.10 Aligned_cols=53 Identities=13% Similarity=0.150 Sum_probs=42.8
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.|++++. ++|++|..++ +.++ |.++++++.+|.||+|++..
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~-v~~~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ--GGFD-IETNDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET--TEEE-EEESSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEEE-EEECCCEEEeCEEEECCCCC
Confidence 4777788888888999998 7999998876 4443 66677789999999999964
No 191
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.98 E-value=2.1 Score=38.12 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=36.7
Q ss_pred HHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEE----CCe--EEecCEEEEeeChh
Q 017660 90 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 90 ~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+ .|++|+++++|++|..+ +++.+|.+ +|+ ++.+|.||++++..
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 344555544 69999999999999864 34555655 354 68999999998753
No 192
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.77 E-value=1.2 Score=40.36 Aligned_cols=54 Identities=11% Similarity=0.108 Sum_probs=39.8
Q ss_pred hhhHHHHHHHHHcC-CEEeccceeeeEEecCCCceEEEEEEC-CeEEe-cCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVCG-KETYS-AGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G-~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~-ad~VV~a~p~~ 143 (368)
.+.+.+.+.+++.| ++|+++++|++|..++ +.+ .|.+. |+++. +|.||++++..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQY-HISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET--TEE-EEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC--Cce-EEEecCCeEeccCCceEEeeccC
Confidence 34577777788887 9999999999997655 433 35554 66554 69999998864
No 193
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=84.70 E-value=0.72 Score=42.76 Aligned_cols=52 Identities=15% Similarity=0.110 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
|.+.|.+.++ +++|+++++|++|..++ ++++ |++. |++++||.||.|.+...
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGK--KKWT-LTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECS--SSEE-EEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECC--CEEE-EEECCCcEEecCEEEECCCcch
Confidence 4445554443 37899999999999876 4454 6665 66899999999999854
No 194
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=84.67 E-value=1.8 Score=40.17 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=42.9
Q ss_pred hhhHHHHHHHHH-cC-CEEeccceeeeEEecCCCceEEEEEE-C---C--eEEecCEEEEeeChhh-HHHhh
Q 017660 87 KIFEPWMDSMRT-RG-CEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELI 149 (368)
Q Consensus 87 ~L~~~l~~~l~~-~G-~~i~~~t~V~~I~~~~~~g~v~~v~~-~---g--~~~~ad~VV~a~p~~~-l~~ll 149 (368)
.|.+.|.+.+++ .| ++|+++++|++|.. ++ + |+ |.+ + | .+++||.||.|.+... +.+.+
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l 175 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-G-RV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHL 175 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-T-EE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-c-cE-EEEecCCCCCceEEecCEEEECCCccchhHHHh
Confidence 467778888776 36 48999999999988 53 4 54 333 2 5 4789999999999864 34444
No 195
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=84.56 E-value=1.8 Score=38.27 Aligned_cols=54 Identities=13% Similarity=0.179 Sum_probs=42.3
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|+++++++ |+.|..++ +.++ +..+++++.+|+||+|++..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~-v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDLQN--RPFR-LNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECSS--SSEE-EEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEecC--CEEE-EEeCCCEEEcCEEEECCCCC
Confidence 3577778888888999999997 99998765 4443 44457789999999999874
No 196
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=84.50 E-value=1.5 Score=41.28 Aligned_cols=52 Identities=10% Similarity=0.168 Sum_probs=42.3
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-CCeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++++++++|+++. + .. |.+ +|+++++|.||++++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~--~--~~---v~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAIN--G--NE---ITFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEE--T--TE---EEETTSCEEECSEEEECCCEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEec--C--Ce---eeecCCeEEeeeeEEEEecee
Confidence 45688899999999999999999999884 3 32 334 47899999999998864
No 197
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=84.29 E-value=1.2 Score=44.24 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=41.0
Q ss_pred cCCEEeccceeeeEEecCCCceEEEEEEC----Ce--EEecCEEEEeeChhhHHHhhhh
Q 017660 99 RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGISTLQELIKN 151 (368)
Q Consensus 99 ~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~--~~~ad~VV~a~p~~~l~~ll~~ 151 (368)
.|++|++++.|++|..+++++++++|++. |+ ++.||.||++++.-...+++..
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh
Confidence 47999999999999987532478888763 43 6899999999998776666543
No 198
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=84.23 E-value=2.5 Score=41.97 Aligned_cols=53 Identities=21% Similarity=0.166 Sum_probs=34.2
Q ss_pred CCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCCCCccccccCCCCchhHHHH
Q 017660 287 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEEDEPHIEAL 346 (368)
Q Consensus 287 ~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~~~~~~~~~~~~~~~~~~~~ 346 (368)
.++||||||+-..+ . +.|-|+.+|+.|+......... .+..+.| ++.+-++++
T Consensus 383 ~~~gLf~AGqinGt--t--GYeEAaaqGl~AG~nAa~~~~~-~~~~~~~--r~~ayiG~l 435 (651)
T 3ces_A 383 FIQGLFFAGQINGT--T--GYEEAAAQGLLAGLNAARLSAD-KEGWAPA--RSQAYLGVL 435 (651)
T ss_dssp SSBTEEECSGGGTC--C--CHHHHHHHHHHHHHHHHHHHTT-CCCCCCC--TTTCHHHHH
T ss_pred CCCCeEEEEEecCC--c--ChHHHHHHHHHHHHHHHHHhcC-CCCCCCC--hhhhhhhhH
Confidence 57999999988743 2 3456777888877666555542 4555555 445555555
No 199
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=83.52 E-value=0.69 Score=43.52 Aligned_cols=53 Identities=8% Similarity=-0.048 Sum_probs=39.1
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-CC--eEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~g--~~~~ad~VV~a~p~~ 143 (368)
+...+.+.+.++++|+++++++.|++|. + +++. +.. +| +++.+|.||++++..
T Consensus 200 ~~~~~~l~~~l~~~GV~~~~~~~v~~v~--~--~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 200 GASKRLVEDLFAERNIDWIANVAVKAIE--P--DKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTHHHHHHHHHHHTTCEEECSCEEEEEC--S--SEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCceEEEEe--C--CceE-EEeeCCCceEeecceEEEeccCC
Confidence 3455667778899999999999999984 3 3343 332 23 479999999998754
No 200
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=82.86 E-value=1.4 Score=40.38 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=40.6
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|+++++|++|. . .. |.++ |+ +++|.||++++..
T Consensus 182 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~~---v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 182 DEELSNMIKDMLEETGVKFFLNSELLEAN--E--EG---VLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp CHHHHHHHHHHHHHTTEEEECSCCEEEEC--S--SE---EEETTEE-EECSCEEEECCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e--eE---EEECCCE-EEcCEEEECcCCC
Confidence 34577888888999999999999999996 3 32 3454 55 9999999998864
No 201
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=82.83 E-value=3.7 Score=40.66 Aligned_cols=53 Identities=23% Similarity=0.175 Sum_probs=31.7
Q ss_pred CCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCCCCccccccCCCCchhHHHH
Q 017660 287 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEEDEPHIEAL 346 (368)
Q Consensus 287 ~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~~~~~~~~~~~~~~~~~~~~ 346 (368)
.++||||||+-..+ . |. |-|+.+|+.|+-.....+. +.+..+.| ++.+=++++
T Consensus 388 ~~~gLf~AGqinGt--~-Gy-eEAaaqGl~AG~nAa~~~~-~~~~~~~~--r~~ayig~l 440 (637)
T 2zxi_A 388 KIRGLFHAGNFNGT--T-GY-EEAAGQGIVAGINAALRAF-GKEPIYLR--RDESYIGVM 440 (637)
T ss_dssp SSBTEEECGGGGTB--C-SH-HHHHHHHHHHHHHHHHHHT-TCCCCCCC--TTTCHHHHH
T ss_pred CCCCEEEeeecCCc--c-hH-HHHHHHHHHHHHHHHHHhc-CCCCCCCC--hhheehhhH
Confidence 47999999998843 2 34 4566677777655554443 24555444 344434443
No 202
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=82.43 E-value=1.8 Score=40.72 Aligned_cols=51 Identities=8% Similarity=-0.047 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--C-----CeEEecCEEEEeeCh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G-----KETYSAGAVVLAVGI 142 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~-----g~~~~ad~VV~a~p~ 142 (368)
+...+.+.++++|++++++++|++|.- ++++.... + ++++.+|.||++.+.
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~----~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVED----NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEET----TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEC----CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 667788889999999999999999963 22331111 2 357899999998764
No 203
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=82.25 E-value=2.4 Score=37.73 Aligned_cols=56 Identities=20% Similarity=0.122 Sum_probs=41.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEec--CCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~--~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|++++. ++|++|..+ ++ +.+..+..+|+++.+|+||+|++..
T Consensus 65 ~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEEEEECCCCEEEeCEEEECcCCC
Confidence 35777888888889999998 689999876 42 2122223457789999999999974
No 204
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=81.65 E-value=1.1 Score=41.16 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=36.4
Q ss_pred HHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 92 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 92 l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
..+.+++.|++++++++|+.|..+. ..| ..+|+++.+|++|+|++..
T Consensus 66 ~~~~~~~~~v~~~~g~~v~~id~~~--~~V---~~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 66 SLDWYRKRGIEIRLAEEAKLIDRGR--KVV---ITEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp CHHHHHHHTEEEECSCCEEEEETTT--TEE---EESSCEEECSEEEECCCEE
T ss_pred CHHHHHhCCcEEEECCEEEEEECCC--CEE---EECCcEEECCEEEECCCCC
Confidence 3445667899999999999997654 333 3567789999999999863
No 205
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=81.62 E-value=0.43 Score=44.29 Aligned_cols=44 Identities=20% Similarity=0.174 Sum_probs=34.7
Q ss_pred HHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeCh
Q 017660 96 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 142 (368)
Q Consensus 96 l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~ 142 (368)
+++.|++|+++++|+.+..+++ + . .|.++ |+++.+|.||++.|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~-~-~-~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTE-A-M-TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETT-T-T-EEEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEeccc-c-e-EEEcCCCcEEEeeEEEEecCc
Confidence 4667999999999999988763 3 2 35555 789999999998765
No 206
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=81.38 E-value=1.5 Score=42.55 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=42.1
Q ss_pred HHHHcCCEEeccceeeeEEecCC-CceEEEEEEC---Ce--EE---ecCEEEEeeChhhHHHhhhh
Q 017660 95 SMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVCG---KE--TY---SAGAVVLAVGISTLQELIKN 151 (368)
Q Consensus 95 ~l~~~G~~i~~~t~V~~I~~~~~-~g~v~~v~~~---g~--~~---~ad~VV~a~p~~~l~~ll~~ 151 (368)
.+++.|.+|++++.|++|..+++ ++++++|.+. |+ ++ .++.||++++.-...+|+..
T Consensus 203 ~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~ 268 (536)
T 1ju2_A 203 KGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLL 268 (536)
T ss_dssp GSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred hhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHH
Confidence 34567899999999999998752 1378888762 44 34 46889999998767666543
No 207
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=80.72 E-value=47 Score=32.91 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=27.9
Q ss_pred CCceEEeccccccCCCC--ccchHHhHHHHHHHHHHHHHhC
Q 017660 288 FPNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 288 ~~~L~laGd~~~~~~~~--~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
.++++|+||..+...|. .+|+-++..+...+..|...+.
T Consensus 350 ~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~ 390 (665)
T 1pn0_A 350 DERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT 390 (665)
T ss_dssp TTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc
Confidence 37899999999754332 5677788888777777766553
No 208
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=80.25 E-value=2.5 Score=40.80 Aligned_cols=51 Identities=10% Similarity=0.256 Sum_probs=38.1
Q ss_pred HHHHHHHHH-cCCEEeccceeeeEEecCCCceEEEEEEC----Ce--EEecCEEEEeeCh
Q 017660 90 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGI 142 (368)
Q Consensus 90 ~~l~~~l~~-~G~~i~~~t~V~~I~~~~~~g~v~~v~~~----g~--~~~ad~VV~a~p~ 142 (368)
..+.+.+++ .|++|++++.|++|..++ +++.+|.+. |+ ++.+|.||++++.
T Consensus 394 ~~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 394 QVLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp HHHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 345566777 589999999999998655 566666652 43 6899999998774
No 209
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=80.05 E-value=2.7 Score=39.89 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=32.6
Q ss_pred cCCEEeccceeeeEEecCCCc-eEEEEEE----------------CC--eEEecCEEEEeeChh
Q 017660 99 RGCEFLDGRRVTDFIYDEERC-CISDVVC----------------GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 99 ~G~~i~~~t~V~~I~~~~~~g-~v~~v~~----------------~g--~~~~ad~VV~a~p~~ 143 (368)
.|++|++++.+++|.-+++ + ++.+|++ +| +++.+|.||.+++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~ 332 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYK 332 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEE
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCC
Confidence 7899999999999976533 4 5655543 23 468999999988763
No 210
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=79.90 E-value=2.2 Score=38.17 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=40.8
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEE-EEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDV-VCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v-~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++.|+++++++ |++|.. + +.+ .| .+. |+++.+|+||+|++..
T Consensus 71 ~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~-~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 71 PELMDEMREQALRFGADLRMED-VESVSL-H--GPL-KSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEEC-S--SSS-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEee-EEEEEe-C--CcE-EEEEeCCCCEEEeCEEEECCCCC
Confidence 3577778788888899999997 999987 3 332 24 454 6689999999999874
No 211
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=79.61 E-value=4.6 Score=40.29 Aligned_cols=51 Identities=16% Similarity=0.227 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECC--eEEecCEEEEeeChh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g--~~~~ad~VV~a~p~~ 143 (368)
....+.+.+++.|++|+++++|++|. ++ + +. +..+| +++.+|.||++++..
T Consensus 575 ~~~~~~~~l~~~GV~v~~~~~v~~i~--~~-~-v~-~~~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVKMIPGVSYQKID--DD-G-LH-VVINGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp THHHHHHHHHHTTCEEECSCEEEEEE--TT-E-EE-EEETTEEEEECCSEEEECCCEE
T ss_pred cHHHHHHHHHhcCCEEEeCcEEEEEe--CC-e-EE-EecCCeEEEEeCCEEEECCCcc
Confidence 44456677889999999999999996 32 3 43 33456 479999999999875
No 212
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=79.41 E-value=2.7 Score=38.51 Aligned_cols=46 Identities=11% Similarity=-0.006 Sum_probs=35.8
Q ss_pred HcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhH
Q 017660 98 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 145 (368)
Q Consensus 98 ~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l 145 (368)
..+.+|+++++|+++...++ ++|+ |++. |++++||.||-|=+....
T Consensus 121 ~~~~~v~~~~~v~~~~~~~~-~~v~-v~~~dG~~~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 121 GLANTIQWNKTFVRYEHIEN-GGIK-IFFADGSHENVDVLVGADGSNSK 167 (412)
T ss_dssp TCTTTEECSCCEEEEEECTT-SCEE-EEETTSCEEEESEEEECCCTTCH
T ss_pred hccceEEEEEEEEeeeEcCC-CeEE-EEECCCCEEEeeEEEECCCCCcc
Confidence 34678999999999987654 6565 5554 789999999999887643
No 213
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=78.14 E-value=3.4 Score=35.84 Aligned_cols=54 Identities=20% Similarity=0.156 Sum_probs=40.5
Q ss_pred hhhhHHHHHHHHHc-CCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 86 EKIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 86 ~~L~~~l~~~l~~~-G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+.+.+++. +.+++ +++|++|..++ +. +.|.+. |+++.+|+||+|++..
T Consensus 56 ~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~--~~-~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 56 GEIIAEARRQIERYPTIHWV-EGRVTDAKGSF--GE-FIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHHTTCTTEEEE-ESCEEEEEEET--TE-EEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC--Ce-EEEEECCCCEEEcCEEEECCCCC
Confidence 35777788888877 55665 45999998876 43 346665 6689999999999984
No 214
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=77.77 E-value=2.2 Score=41.87 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=40.6
Q ss_pred HHcCCEEeccceeeeEEecCCCceEEEEEEC---Ce--EEecC-EEEEeeChhhHHHhhh
Q 017660 97 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAG-AVVLAVGISTLQELIK 150 (368)
Q Consensus 97 ~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~---g~--~~~ad-~VV~a~p~~~l~~ll~ 150 (368)
++.+.+|++++.|++|..+.+++++++|... |+ ++.|. -||++++.-...+||-
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~ 276 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLM 276 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHH
Confidence 3458999999999999998321788998863 44 56774 5999998877766653
No 215
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=77.22 E-value=5.8 Score=38.16 Aligned_cols=58 Identities=19% Similarity=0.180 Sum_probs=41.4
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCC--CceEEEEE--E-CC-e--EEecCEEEEeeChh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEE--RCCISDVV--C-GK-E--TYSAGAVVLAVGIS 143 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~--~g~v~~v~--~-~g-~--~~~ad~VV~a~p~~ 143 (368)
...+.+.+.+.+++.|++|++++.|++|...++ .+++. +. . +| + ++.+|.||++++..
T Consensus 249 d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 249 DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEE-EEEEESSSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEE-EEEEECCCcEEEEEECCEEEEecCCc
Confidence 456788888889999999999999988875331 12332 32 2 34 2 56899999999864
No 216
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=76.84 E-value=1.5 Score=42.96 Aligned_cols=56 Identities=20% Similarity=0.124 Sum_probs=41.3
Q ss_pred HHHcCCEEeccceeeeEEec---CCCceEEEEEEC---C-e--EEec-CEEEEeeChhhHHHhhhh
Q 017660 96 MRTRGCEFLDGRRVTDFIYD---EERCCISDVVCG---K-E--TYSA-GAVVLAVGISTLQELIKN 151 (368)
Q Consensus 96 l~~~G~~i~~~t~V~~I~~~---~~~g~v~~v~~~---g-~--~~~a-d~VV~a~p~~~l~~ll~~ 151 (368)
+++.+.+|++++.|++|..+ +++++++||... | + ++.| .-||+++++-...+||--
T Consensus 218 ~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~l 283 (566)
T 3fim_B 218 QSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQL 283 (566)
T ss_dssp TTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred ccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHh
Confidence 34568999999999999987 211467888763 4 3 5678 569999998777776543
No 217
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=76.76 E-value=3.5 Score=43.15 Aligned_cols=50 Identities=22% Similarity=0.331 Sum_probs=38.0
Q ss_pred HHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--------C--eEEecCEEEEeeChh
Q 017660 93 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--------K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 93 ~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--------g--~~~~ad~VV~a~p~~ 143 (368)
.+.+++.|++|++++.|++|..+++ +++.+|++. | +++.+|.||++++..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~ 382 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGFN 382 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCcC
Confidence 5668889999999999999986412 445555542 3 478999999998863
No 218
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=76.70 E-value=4.4 Score=39.30 Aligned_cols=58 Identities=12% Similarity=0.160 Sum_probs=41.3
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC---C--eEEecCEEEEeeChhh-HHHhhh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---K--ETYSAGAVVLAVGIST-LQELIK 150 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~---g--~~~~ad~VV~a~p~~~-l~~ll~ 150 (368)
|.+.|.+.+++. |+++++|++|..++ ++|+....+ | .+++||+||.|.+... +.+.+.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRD--DHVRATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECS--SCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeC--CEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 556677777765 99999999999876 446532222 4 3789999999999864 445543
No 219
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=76.63 E-value=3.8 Score=36.17 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=39.5
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
.+.....+...+.+..+..+..+....... . ..+..+++++++|++|+|++..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGAVYQYGDIKSVEDKGE--Y--KVINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEEECSS--C--EEEECSSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhccccccceeeeeeeeeec--c--eeeccCCeEEEeceeEEcccCc
Confidence 356666677777888888888887776544 3 2355667899999999999974
No 220
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=76.62 E-value=2.4 Score=41.62 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=41.2
Q ss_pred HHcCCEEeccceeeeEEecCCC--ceEEEEEE---CCe--EEec-CEEEEeeChhhHHHhhhh
Q 017660 97 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELIKN 151 (368)
Q Consensus 97 ~~~G~~i~~~t~V~~I~~~~~~--g~v~~v~~---~g~--~~~a-d~VV~a~p~~~l~~ll~~ 151 (368)
++.+.+|++++.|++|..++++ +++++|.. +|+ ++.| +.||++++.-...+||-.
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~ 304 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEY 304 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHh
Confidence 4568999999999999987421 47888875 354 5788 889999998766666543
No 221
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=75.78 E-value=2.6 Score=35.67 Aligned_cols=37 Identities=24% Similarity=0.401 Sum_probs=30.3
Q ss_pred CCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 286 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
|..||||.+||.. +.+ ....++.+|+.+|+.|+++++
T Consensus 196 t~~p~iya~G~~a--~~g--~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 196 KRLEGLYAVGLCV--REG--DYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp TTSBSEEECGGGT--SCC--CHHHHHHHHHHHHHHHHHHC-
T ss_pred cccccceeeeecc--cCc--cHHHHHHHHHHHHHHHHhhcC
Confidence 5789999999998 343 556788999999999998763
No 222
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=75.58 E-value=2 Score=38.57 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=32.7
Q ss_pred HHHcCCEEeccceeeeEEecCCCceEEEEEE----CC--eEEecCEEEEeeChh
Q 017660 96 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 96 l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~a~p~~ 143 (368)
+++.|++|+++++|++|..++ + +.+|.+ +| +++.+|.||++++..
T Consensus 201 ~~~~gV~v~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 201 RNNDKIRFLTNHTVVAVDGDT--T-VTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp HHCTTEEEECSEEEEEEECSS--S-CCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred hccCCcEEEeCceeEEEecCC--c-EeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 466899999999999997544 3 233333 24 478999999988763
No 223
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=75.40 E-value=3.3 Score=35.98 Aligned_cols=40 Identities=18% Similarity=0.045 Sum_probs=32.9
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
..|..+|+|.+||... .+ .....|+..|..||..|.+.+.
T Consensus 253 ~~t~~~~vya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 253 KQTTARGIFACGDVAR--PA-GSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CBCSSTTEEECSGGGC--TT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecCC--ch-HHHHHHHHhHHHHHHHHHHHHh
Confidence 3467899999999885 23 4667899999999999998875
No 224
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=75.06 E-value=3.1 Score=39.98 Aligned_cols=52 Identities=17% Similarity=0.226 Sum_probs=41.6
Q ss_pred HcCCEEeccceeeeEEecCCCceEEEEEEC--Ce--EEecCEEEEeeChhhHHHhhhh
Q 017660 98 TRGCEFLDGRRVTDFIYDEERCCISDVVCG--KE--TYSAGAVVLAVGISTLQELIKN 151 (368)
Q Consensus 98 ~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g~--~~~ad~VV~a~p~~~l~~ll~~ 151 (368)
+.+.+|++++.|++|..++ +++++|... ++ ++.|+.||+++++=...+||-.
T Consensus 223 r~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~ 278 (526)
T 3t37_A 223 RKNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMR 278 (526)
T ss_dssp CTTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhhh
Confidence 3468999999999999988 788888764 33 5788999999998777777643
No 225
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=74.90 E-value=3.4 Score=38.75 Aligned_cols=46 Identities=24% Similarity=0.281 Sum_probs=36.5
Q ss_pred HHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 93 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 93 ~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+++.|++++++++|+.|..++ .. |.++ |+++.+|+||+|++..
T Consensus 67 ~~~~~~~gv~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 67 PDAYAAQNIQLLGGTQVTAINRDR--QQ---VILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHHTTEEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHHhCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEcCCCC
Confidence 355677899999999999998754 43 4454 6689999999999874
No 226
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=73.87 E-value=5.1 Score=35.07 Aligned_cols=54 Identities=20% Similarity=0.245 Sum_probs=39.5
Q ss_pred hhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEE-EEECCeEEecCEEEEeeCh
Q 017660 86 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD-VVCGKETYSAGAVVLAVGI 142 (368)
Q Consensus 86 ~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~-v~~~g~~~~ad~VV~a~p~ 142 (368)
..+.+.+.+.+++.|.+++++ +|++| .+++.+.+.. +..++ ++.+|+||+|++.
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 357788888888899999999 89999 5541122321 33335 8999999999987
No 227
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=73.77 E-value=5.3 Score=35.15 Aligned_cols=55 Identities=16% Similarity=0.155 Sum_probs=37.6
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
.+.+...+.+.+.+...+.+..|..+...++ +..+ |.+. |+++++|+||+|++..
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 61 EFKEIGLNEVMKYPSVHYYEKTVVMITKQST-GLFE-IVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp HHHHHHHHHHTTSTTEEEEECCEEEEEECTT-SCEE-EEETTCCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcEE-EEECCCCEEEeCEEEEccCCc
Confidence 3555666666666766666667777766553 5443 4444 7799999999999874
No 228
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=73.15 E-value=3.7 Score=38.14 Aligned_cols=45 Identities=27% Similarity=0.283 Sum_probs=35.7
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+.+++.|.+++++++|+.|..+. .. |.+. |+++.+|++|+|++..
T Consensus 65 ~~~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 65 DWYGEARIDMLTGPEVTALDVQT--RT---ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp THHHHTTCEEEESCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEccCCc
Confidence 34567899999999999998765 43 4444 6789999999999864
No 229
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=72.75 E-value=1 Score=42.28 Aligned_cols=46 Identities=15% Similarity=0.149 Sum_probs=35.3
Q ss_pred HHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 92 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 92 l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+.+.+++.|++++.+ +|++|..++ .. |+++ |+++.+|++|+|+++.
T Consensus 62 ~~~~~~~~gv~~i~~-~v~~Id~~~--~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 62 LAPLLPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp STTTGGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHHHHHCCcEEEEe-EEEEEECCC--CE---EEECCCCEEECCEEEEeCCCC
Confidence 334466779999877 799998765 43 4555 7799999999999975
No 230
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=72.61 E-value=4 Score=35.95 Aligned_cols=51 Identities=6% Similarity=0.079 Sum_probs=37.9
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEee
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAV 140 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~ 140 (368)
.+...+.+.+++.|.++++++ |+.|..++ +++..|.++ |+++.+|.||+++
T Consensus 181 ~~~~~~~~~l~~~g~~~~~~~-v~~~~~~~--~~~~~v~~~~g~~i~~~~~vi~~ 232 (304)
T 4fk1_A 181 ELSQTIMDELSNKNIPVITES-IRTLQGEG--GYLKKVEFHSGLRIERAGGFIVP 232 (304)
T ss_dssp CCCHHHHHHHHTTTCCEECSC-EEEEESGG--GCCCEEEETTSCEECCCEEEECC
T ss_pred cchhhhhhhhhccceeEeeee-EEEeecCC--Ceeeeeeccccceeeecceeeee
Confidence 477788888898999998875 77777665 667777776 5677777766543
No 231
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=72.56 E-value=3.1 Score=42.02 Aligned_cols=49 Identities=12% Similarity=0.073 Sum_probs=35.7
Q ss_pred HHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE---CC-eE------------------EecCEEEEeeChh
Q 017660 90 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ET------------------YSAGAVVLAVGIS 143 (368)
Q Consensus 90 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~---~g-~~------------------~~ad~VV~a~p~~ 143 (368)
..+.+.+++.|++|++++.|++|.. + + +. +.. ++ ++ +.||.||++++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~-~--~-v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEP-G--R-ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEET-T--E-EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEEC-C--e-EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 4566778889999999999999963 2 3 32 222 22 23 8999999999864
No 232
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=72.28 E-value=5.4 Score=37.73 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=37.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC---Ce--EEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG---KE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~---g~--~~~ad~VV~a~p~~ 143 (368)
.+.+.+.+.++ ++|+++++|++|..+++ +++. |.+. |+ ++.+|.||++++..
T Consensus 215 ~~~~~l~~~l~---v~i~~~~~v~~i~~~~~-~~v~-v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 215 DIVNTLLSILK---LNIKFNSPVTEVKKIKD-DEYE-VIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHC---CCEECSCCEEEEEEEET-TEEE-EEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHhcCE---EEEEECCEEEEEEEcCC-CcEE-EEEEecCCceEEEEcCEEEECcCCC
Confidence 45555555444 99999999999987652 3354 5543 44 79999999999874
No 233
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=71.09 E-value=9.7 Score=40.06 Aligned_cols=48 Identities=23% Similarity=0.220 Sum_probs=37.1
Q ss_pred HHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--------------C--eEEecCEEEEeeCh
Q 017660 93 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--------------K--ETYSAGAVVLAVGI 142 (368)
Q Consensus 93 ~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--------------g--~~~~ad~VV~a~p~ 142 (368)
.+.+++.|++|++++.|++|..++ ++|++|++. | .++.||.||++++.
T Consensus 377 ~~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 377 VELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 356778899999999999998654 667666531 2 26899999999876
No 234
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=70.15 E-value=6.8 Score=35.83 Aligned_cols=46 Identities=22% Similarity=0.137 Sum_probs=36.3
Q ss_pred HHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 93 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 93 ~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
.+.+++.|++++++++|+.|..++ .. |.++++++.+|++|+|++..
T Consensus 67 ~~~~~~~~v~~~~~~~v~~i~~~~--~~---v~~~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 67 GAMAEQLNARILTHTRVTGIDPGH--QR---IWIGEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHHHHTTCEEECSCCCCEEEGGG--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHHhCCcEEEeCCEEEEEECCC--CE---EEECCcEEECCEEEEeCCCC
Confidence 344567899999999999998755 43 45567789999999999874
No 235
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=68.10 E-value=6.8 Score=34.85 Aligned_cols=41 Identities=20% Similarity=0.283 Sum_probs=32.3
Q ss_pred CCCCCCceEEec--cccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 284 GFTSFPNLFMAG--DWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 284 ~~~~~~~L~laG--d~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
..+..+|+|.+| |.+.+ .+ ..+.+|...|..+|..|.+.+.
T Consensus 310 ~~t~~~~vya~Gd~d~~~~-~~-~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGM-AS-ATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp BBSSCTTEEECSSCGGGST-TC-SSTTTHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCeEEecccccccc-ch-hhhhhhHHHHHHHHHHHHHHHH
Confidence 456789999999 55542 22 4667799999999999999986
No 236
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=67.56 E-value=6.9 Score=37.23 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=37.3
Q ss_pred HHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--CeEEecCEEEEeeChh
Q 017660 91 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 143 (368)
Q Consensus 91 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+++.|++++++++|+.|..++ +.|. +..+ ++++.+|+||+|++..
T Consensus 97 ~~~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 97 SDKEELESLGAKVYMESPVQSIDYDA--KTVT-ALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp CCHHHHHHTTCEEETTCCEEEEETTT--TEEE-EEETTEEEEEECSEEEECCCEE
T ss_pred cCHHHHHhCCCEEEeCCEEEEEECCC--CEEE-EEeCCcEEEEECCEEEECCCCC
Confidence 33455677899999999999998765 5443 4313 3479999999999964
No 237
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=67.31 E-value=14 Score=35.98 Aligned_cols=60 Identities=15% Similarity=0.131 Sum_probs=40.9
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEec------C-CCceEE-EEEE-CCeEEe--cCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------E-ERCCIS-DVVC-GKETYS--AGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~------~-~~g~v~-~v~~-~g~~~~--ad~VV~a~p~~~ 144 (368)
...+.+.+.+.+++.|++|++++.|++|... + +.+++. .+.. +|++++ +|.||++++...
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p 395 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREP 395 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcc
Confidence 3457777888889999999999999888532 1 113332 1222 465554 999999998753
No 238
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=67.23 E-value=7.4 Score=36.48 Aligned_cols=47 Identities=15% Similarity=0.061 Sum_probs=34.9
Q ss_pred HHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--C--eEEecCEEEEeeChh
Q 017660 94 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 94 ~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g--~~~~ad~VV~a~p~~ 143 (368)
+.+++.|.+++++++|++|..+. ..+. +... + .++.+|++|+|++..
T Consensus 65 ~~~~~~~i~~~~~~~V~~id~~~--~~~~-~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 65 KFYDRKQITVKTYHEVIAINDER--QTVS-VLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHHCCEEEETEEEEEEETTT--TEEE-EEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHHhcCCEEEeCCeEEEEEccC--cEEE-EEeccCCceEEEEcCEEEECCCCc
Confidence 34567799999999999998765 4443 3332 2 368999999999974
No 239
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=66.25 E-value=5.9 Score=34.72 Aligned_cols=54 Identities=7% Similarity=0.126 Sum_probs=38.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
.|.+.+.+.+++.+.++..++ |..+..+.+ . ...+..++.++.+|+||+|++..
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~-~-~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQ-P-FKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSS-S-EEEEETTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCC-c-eEEEECCCeEEEEeEEEEccccc
Confidence 477788888888888888764 555555542 3 33333346789999999999974
No 240
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=65.53 E-value=9.4 Score=36.93 Aligned_cols=49 Identities=12% Similarity=-0.076 Sum_probs=35.8
Q ss_pred HHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-C-Ce--EEecCEEEEeeChh
Q 017660 92 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-KE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 92 l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-~-g~--~~~ad~VV~a~p~~ 143 (368)
+....++.|.+++++++|++|..++ +.++ +.. . |+ ++.+|+||+|++..
T Consensus 64 ~~~~~~~~~i~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 64 PESFKARFNVEVRVKHEVVAIDRAA--KLVT-VRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp HHHHHHHHCCEEETTEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHhcCcEEEECCEEEEEECCC--CEEE-EEecCCCCeEEEECCEEEECCCCC
Confidence 3334455799999999999998766 5443 433 2 33 78999999999873
No 241
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=65.53 E-value=10 Score=36.93 Aligned_cols=52 Identities=12% Similarity=0.079 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--CCe--EEecCEEEEeeCh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 142 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~a~p~ 142 (368)
+...+....++.|.+++++++|++|..++ +.++ +.. +|+ ++.+|+||+|++.
T Consensus 95 ~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 95 LVQTVERMSKRFNLDIRVLSEVVKINKEE--KTIT-IKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp BSSCHHHHHHHTTCEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred hccCHHHHHHhcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEeCCEEEECCCC
Confidence 33445555677899999999999998776 5443 443 355 6899999999986
No 242
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=65.51 E-value=12 Score=35.08 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=36.9
Q ss_pred HHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--CCe--EEecCEEEEeeChh
Q 017660 91 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 91 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~a~p~~ 143 (368)
.+.+.+++.|+++++++.|+.|..++ +.|. +.. +|+ ++.+|++|+|++..
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPKE--HQVT-VKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCCC--CEEE-EEecCCCceEEEeCCEEEEcCCCC
Confidence 33455667899999999999998766 5443 443 244 48999999999864
No 243
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=65.51 E-value=3.9 Score=38.73 Aligned_cols=47 Identities=21% Similarity=0.260 Sum_probs=32.1
Q ss_pred HHHHHHcCCEEeccceeeeEEecCCCceEEEEEE-------------------CC--eEEecCEEEEeeCh
Q 017660 93 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------------------GK--ETYSAGAVVLAVGI 142 (368)
Q Consensus 93 ~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~-------------------~g--~~~~ad~VV~a~p~ 142 (368)
.+.+++.|+++++++.|++|.- + |+|.+|.+ +| .++.||.||++++.
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~-~--g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~ 376 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG-D--TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGF 376 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE-E--EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHCCCEEEeCCCceEEeC-C--CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCC
Confidence 3557778999999999999974 2 55443322 12 25778888887765
No 244
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=65.48 E-value=8.9 Score=30.53 Aligned_cols=40 Identities=28% Similarity=0.202 Sum_probs=30.9
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
++..+++|.+||......+ ....|...|..||..|...+.
T Consensus 132 ~t~~~~i~a~GD~~~~~~~--~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 132 RTSYPRVYAAGVARGKVPG--HAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp BCSSTTEEECGGGGTCCSC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCEEEeecccCcchh--hHHHHHHhHHHHHHHHHHHhh
Confidence 3567999999999864222 446688899999999998764
No 245
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=65.12 E-value=6.1 Score=36.60 Aligned_cols=51 Identities=18% Similarity=0.108 Sum_probs=39.0
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+.....+.+++.|.+++++++|+.|..++ .. |.+. |+++.+|++|+|++..
T Consensus 67 ~~~~~~~~~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 67 ICIRPAQFWEDKAVEMKLGAEVVSLDPAA--HT---VKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp GBSSCHHHHHHTTEEEEETCCEEEEETTT--TE---EEETTSCEEEEEEEEECCCEE
T ss_pred hccCCHHHHHHCCcEEEeCCEEEEEECCC--CE---EEECCCCEEEeeEEEEccCCc
Confidence 44444566778899999999999998655 43 4454 6789999999999853
No 246
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=64.56 E-value=8.7 Score=36.05 Aligned_cols=49 Identities=22% Similarity=0.263 Sum_probs=37.1
Q ss_pred HHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC--CeEEecCEEEEeeChh
Q 017660 92 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 143 (368)
Q Consensus 92 l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~--g~~~~ad~VV~a~p~~ 143 (368)
..+.+++.|.+++++++|++|..++ +.+. +... ++++.+|++|+|++..
T Consensus 64 ~~~~~~~~gi~~~~~~~V~~id~~~--~~v~-v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 64 TEEELRRQKIQLLLNREVVAMDVEN--QLIA-WTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp CHHHHHHTTEEEECSCEEEEEETTT--TEEE-EEETTEEEEEECSEEEECCCCC
T ss_pred CHHHHHHCCCEEEECCEEEEEECCC--CEEE-EEecCceEEEEcCEEEECCCcc
Confidence 3455677899999999999998766 5443 4323 4579999999999873
No 247
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=64.42 E-value=11 Score=35.20 Aligned_cols=50 Identities=14% Similarity=0.130 Sum_probs=37.2
Q ss_pred HHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEE--C--CeEEecCEEEEeeChh
Q 017660 91 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 143 (368)
Q Consensus 91 ~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~--g~~~~ad~VV~a~p~~ 143 (368)
.+.+.+++.|++++++++|+.|..++ +.+. +.. + ++++++|++|+|++..
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET--KTIK-VKDLITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC--CEEE-EEecCCCceEEEECCEEEEccCCC
Confidence 33455677899999999999998766 5443 443 1 3579999999999863
No 248
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=64.18 E-value=4.9 Score=37.26 Aligned_cols=43 Identities=28% Similarity=0.325 Sum_probs=34.0
Q ss_pred HHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 96 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 96 l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+++.|++++++++|+.|..++ .. |.+. |+++.+|++|+|++..
T Consensus 69 ~~~~~v~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 69 KRAPEVEWLLGVTAQSFDPQA--HT---VALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp TTSCSCEEEETCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHCCCEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 456789999999999998654 43 4454 6689999999999973
No 249
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=62.97 E-value=4.4 Score=37.92 Aligned_cols=51 Identities=14% Similarity=0.173 Sum_probs=38.1
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 144 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~ 144 (368)
+...+.+.+++.|++++. .+|++|..++ .. |.++ |+++.+|+||+|++...
T Consensus 61 ~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFIA-QSAEQIDAEA--QN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp HEEECHHHHHTTTCEEEC-SCEEEEETTT--TE---EEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHHHHHCCCEEEE-eEEEEEEcCC--CE---EEECCCCEEECCEEEECCCCCc
Confidence 444556677888999985 5999998655 43 4555 66899999999998743
No 250
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=62.78 E-value=8 Score=38.32 Aligned_cols=53 Identities=28% Similarity=0.308 Sum_probs=34.3
Q ss_pred CCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCCCCccccccCCCCchhHHHH
Q 017660 287 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEEDEPHIEAL 346 (368)
Q Consensus 287 ~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~~~~~~~~~~~~~~~~~~~~ 346 (368)
.++||||||+-... . +.+-|+.+|+.|+..+..... +.+..+.| ++.+=++++
T Consensus 377 ~~~gLf~AGqi~g~--~--Gy~eA~a~G~~AG~naa~~~~-~~~~~~~~--r~~~y~g~l 429 (641)
T 3cp8_A 377 PVENLFFAGQINGT--S--GYEEAAAQGLMAGINAVRKIL-GKELIVLG--RDQAYIGVL 429 (641)
T ss_dssp SSBTEEECSGGGTB--C--CHHHHHHHHHHHHHHHHHHHH-TCCCCCCC--TTTCHHHHH
T ss_pred CcCCEEEEEeecCC--c--cHHHHHHHHHHHHHHHHHHhc-CCCCCCCC--hhhhHHHHH
Confidence 57999999998853 2 345677888888877765554 24445444 344444444
No 251
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=62.51 E-value=6.8 Score=36.77 Aligned_cols=40 Identities=18% Similarity=0.268 Sum_probs=29.2
Q ss_pred CCCCceEEecccccc-C-CCCccchHHhHHHHHHHHHHHHHh
Q 017660 286 TSFPNLFMAGDWITT-R-HGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 286 ~~~~~L~laGd~~~~-~-~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+++|||+||+-+.- + .|+-.+..|+.+|+.|++.+.+..
T Consensus 402 ~~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 402 KFTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 378999999987742 2 122345668999999999887654
No 252
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=61.81 E-value=8.4 Score=36.52 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=36.0
Q ss_pred HHHHHH-HcCCEEeccceeeeEEecCCCceEEEEEE--CCe--EEecCEEEEeeChh
Q 017660 92 WMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 92 l~~~l~-~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~a~p~~ 143 (368)
..+.+. ..|++++++++|+.|..++ +.|. +.. +|+ ++.+|++|+|++..
T Consensus 98 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 98 NVKTFRDKYGIDAKVRHEVTKVDTEK--KIVY-AEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp CHHHHHHTTCCEEESSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred CHHHHHhhcCCEEEeCCEEEEEECCC--CEEE-EEEcCCCceEEEEcCEEEECCCCc
Confidence 344453 4499999999999998765 5453 444 255 79999999999864
No 253
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=61.53 E-value=7.1 Score=36.89 Aligned_cols=51 Identities=18% Similarity=0.040 Sum_probs=35.1
Q ss_pred HHHHHHHHH------cCCEEeccceeeeEEecCCCceEEEEEE-----------------CC--eEEecCEEEEeeChh
Q 017660 90 EPWMDSMRT------RGCEFLDGRRVTDFIYDEERCCISDVVC-----------------GK--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 90 ~~l~~~l~~------~G~~i~~~t~V~~I~~~~~~g~v~~v~~-----------------~g--~~~~ad~VV~a~p~~ 143 (368)
+.|.+.+++ .|++|++++.|++|.-+ +++.+|++ +| +++.||.||.+++..
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 445555555 78999999999999743 33333332 23 368999999998864
No 254
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=61.46 E-value=5.7 Score=38.53 Aligned_cols=46 Identities=11% Similarity=0.338 Sum_probs=34.4
Q ss_pred HHHHHHHcCCEEec--cceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhH
Q 017660 92 WMDSMRTRGCEFLD--GRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 145 (368)
Q Consensus 92 l~~~l~~~G~~i~~--~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l 145 (368)
+.+.+++.+++++. +++|++|.- . | |++. | ++++|.||+|++....
T Consensus 344 y~~al~~~nV~lv~~~~~~I~~it~-~--g----v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 344 YYETYNRDNVHLVDIREAPIQEVTP-E--G----IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEET-T--E----EEESSC-EEECSEEEECCCCBSS
T ss_pred HHHHhcCCCEEEEecCCCCceEEcc-C--e----EEeCCC-eeecCEEEECCccccc
Confidence 34556677899986 899999852 2 3 3444 6 9999999999999753
No 255
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=60.10 E-value=11 Score=34.59 Aligned_cols=52 Identities=12% Similarity=0.235 Sum_probs=38.2
Q ss_pred hhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCe----EEecCEEEEeeChh
Q 017660 87 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKE----TYSAGAVVLAVGIS 143 (368)
Q Consensus 87 ~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~----~~~ad~VV~a~p~~ 143 (368)
.+...+.+.+++.|++++.+ +|++|..++ ..|+ +. +++ ++.+|+||+|++..
T Consensus 57 ~~~~~~~~~~~~~gv~~~~~-~v~~i~~~~--~~V~-~~-~g~~~~~~~~~d~lViAtG~~ 112 (409)
T 3h8l_A 57 ELKVDLSEALPEKGIQFQEG-TVEKIDAKS--SMVY-YT-KPDGSMAEEEYDYVIVGIGAH 112 (409)
T ss_dssp CEEEEHHHHTGGGTCEEEEC-EEEEEETTT--TEEE-EE-CTTSCEEEEECSEEEECCCCE
T ss_pred HHHHHHHHHHhhCCeEEEEe-eEEEEeCCC--CEEE-Ec-cCCcccceeeCCEEEECCCCC
Confidence 35566777788889999988 999998765 4332 22 232 48999999998874
No 256
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=59.47 E-value=16 Score=34.26 Aligned_cols=50 Identities=20% Similarity=0.302 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C-eEEecCEEEEeeChh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIS 143 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g-~~~~ad~VV~a~p~~ 143 (368)
+.+.+.+.+++.|++++.++.+. + +. +.+ .|.+. | +++.+|+||+|++..
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v-~V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTV-RVVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE-E--ET--TEE-EEEETTEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeE-EEEeCCCcEEEEeCEEEEecCCC
Confidence 33445566777899999998764 3 44 444 35554 4 579999999999874
No 257
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=57.31 E-value=12 Score=35.44 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=32.6
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
..|..+|+|.+||-... + ..+..|+..|+.||..|.+.+.
T Consensus 405 ~~Ts~~~VfA~GD~~~g--~-~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIVRG--A-SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp CBCSSTTEEECGGGGSS--C-CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEeccccCC--c-hHHHHHHHHHHHHHHHHHHHhh
Confidence 34678999999999852 3 4667799999999999998875
No 258
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=57.09 E-value=5.6 Score=37.99 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=33.0
Q ss_pred HcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 98 TRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 98 ~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
+.|++++++++|++|..++ .. |.+. |+++.+|++|+|++..
T Consensus 102 ~~gv~~~~g~~v~~id~~~--~~---V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD--NM---VKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG--TE---EEETTSCEEEEEEEEECCCEE
T ss_pred cCCeEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 4689999999999998765 43 4454 6789999999999864
No 259
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=56.85 E-value=20 Score=31.23 Aligned_cols=40 Identities=23% Similarity=0.116 Sum_probs=28.7
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+|.++|+|.+||-+...+ ....-|+..|..||..+.+-+
T Consensus 272 ~~Ts~pgIyA~GDv~~~~~--~~~~~A~~~G~~AA~~~~~yL 311 (314)
T 4a5l_A 272 PKTSVDGVFACGDVCDRVY--RQAIVAAGSGCMAALSCEKWL 311 (314)
T ss_dssp TBCSSTTEEECSTTTCSSC--CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEeccCCcc--hHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999885322 133346778999998887655
No 260
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=56.84 E-value=14 Score=35.31 Aligned_cols=55 Identities=15% Similarity=0.003 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCc-----eEEEEEEC----C--eEEecCEEEEeeCh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-----CISDVVCG----K--ETYSAGAVVLAVGI 142 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g-----~v~~v~~~----g--~~~~ad~VV~a~p~ 142 (368)
+.+-|....++.+..|+++++|++|...++++ ..+.|++. | +++.|+.||++++.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 66666666677777899999999998754311 23555553 2 36899999999984
No 261
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=56.66 E-value=3.2 Score=38.27 Aligned_cols=45 Identities=13% Similarity=0.164 Sum_probs=36.5
Q ss_pred chhhhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhh
Q 017660 85 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 144 (368)
Q Consensus 85 ~~~L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~ 144 (368)
...+.+.+.+.++++|+++++++.|++| |+++.+|.||++++...
T Consensus 187 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i---------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 187 DRDGGLFLKDKLDRLGIKIYTNSNFEEM---------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp CHHHHHHHHHHHHTTTCEEECSCCGGGC---------------HHHHHHSEEEECCCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEc---------------CeEEecCeEEECcCccc
Confidence 3456777888888999999999999887 34568999999998753
No 262
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=56.14 E-value=13 Score=35.02 Aligned_cols=44 Identities=20% Similarity=0.171 Sum_probs=31.1
Q ss_pred HHcCCEEeccceeeeEEecCCCceEEEEEE--CCe--EEecCEEEEeeChh
Q 017660 97 RTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 97 ~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~a~p~~ 143 (368)
++.|.+++++++|++|..++ +.+. +.. +|+ ++.+|++|+|++..
T Consensus 77 ~~~gi~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 77 INKDVEALVETRAHAIDRAA--HTVE-IENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ----CEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred hhcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEECCEEEEeCCCC
Confidence 35789999999999998766 5443 443 244 78999999999863
No 263
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=55.70 E-value=4.9 Score=38.97 Aligned_cols=44 Identities=14% Similarity=0.193 Sum_probs=32.7
Q ss_pred HHHcCCEEec--cceeeeEEecCCCceEEEEEE-CCeEEecCEEEEeeChhhHH
Q 017660 96 MRTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQ 146 (368)
Q Consensus 96 l~~~G~~i~~--~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~a~p~~~l~ 146 (368)
+.+.++++.. +++|++|. ++ | |++ +|+++++|.||+|++.....
T Consensus 340 l~~~nV~lv~~~~~~I~~it--~~-g----v~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVT--AK-G----VVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp GGSTTEEEEETTTSCEEEEC--SS-E----EEETTCCEEECSEEEECCCBSCSS
T ss_pred hcCCCEEEEeCCCCCccEEe--cC-e----EEcCCCCEEECCEEEECCccCccc
Confidence 3566788886 78999985 21 3 445 47789999999999997543
No 264
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=55.59 E-value=15 Score=33.67 Aligned_cols=41 Identities=22% Similarity=0.112 Sum_probs=31.6
Q ss_pred CCCCCceEEecccccc-CCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 285 FTSFPNLFMAGDWITT-RHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~-~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
.+..+|+|.+||.+.. ..+ -+...|...|..+|+.|++.+.
T Consensus 283 ~t~~p~VfAiGDva~~~~~p-k~a~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 283 SSLQPGIHVIGDACNAAPMP-KSAYSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp BSSSTTEEECGGGBCCTTSC-BSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCEEEecccccCCCCC-chHHHHHHHHHHHHHHHHHHhc
Confidence 3567999999998752 334 3456678899999999998874
No 265
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=55.55 E-value=15 Score=33.80 Aligned_cols=49 Identities=14% Similarity=0.169 Sum_probs=37.4
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeCh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGI 142 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~ 142 (368)
+.....+.+.+.|.++++ ++|++|..++ .. |.+. |+++.+|++|+|++.
T Consensus 59 ~~~~~~~~~~~~~i~~~~-~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 59 LMFRPEKFFQDQAIELIS-DRMVSIDREG--RK---LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp SBSSCHHHHHHTTEEEEC-CCEEEEETTT--TE---EEESSSCEEECSEEEECCCE
T ss_pred ccCCCHHHHHhCCCEEEE-EEEEEEECCC--CE---EEECCCCEEECCEEEEeeCC
Confidence 334445667788999999 9999998765 43 4444 678999999999986
No 266
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=55.22 E-value=17 Score=34.10 Aligned_cols=50 Identities=16% Similarity=0.064 Sum_probs=35.4
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-C--eEEecCEEEEeeChh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGIS 143 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g--~~~~ad~VV~a~p~~ 143 (368)
+.+.+.+.+++.|++++.++.+. .+. +.+. |.+. | +++.+|+||+|++..
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~--~~v~-V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA--NTLL-VDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS--SEEE-EEETTSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC--CeEE-EEeCCCceEEEEcCEEEECCCCC
Confidence 34445666778899999998754 343 4443 5554 5 579999999999874
No 267
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=55.14 E-value=9.2 Score=37.02 Aligned_cols=43 Identities=30% Similarity=0.336 Sum_probs=30.7
Q ss_pred CCCCCCceEEeccccccC-CC-----CccchHHhHHHHHHHHHHHHHhC
Q 017660 284 GFTSFPNLFMAGDWITTR-HG-----SWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~-~~-----~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
.+++++|||.||+....+ |+ ..++-.|+..|+.|++.+.+...
T Consensus 363 ~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 363 GRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp CBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 347899999999987422 22 13455578889999999887654
No 268
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=54.54 E-value=9.1 Score=35.44 Aligned_cols=37 Identities=11% Similarity=0.322 Sum_probs=26.7
Q ss_pred CCCCceEEecccccc-C-CCCccchHHhHHHHHHHHHHH
Q 017660 286 TSFPNLFMAGDWITT-R-HGSWSQERSYVTGLEAANRVV 322 (368)
Q Consensus 286 ~~~~~L~laGd~~~~-~-~~~~~~egA~~Sg~~aA~~Il 322 (368)
+.+|||||||+-+.- + .|+-.+..|..||+.|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHh
Confidence 468999999987742 1 111245679999999998874
No 269
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=53.26 E-value=10 Score=35.55 Aligned_cols=42 Identities=21% Similarity=0.209 Sum_probs=32.1
Q ss_pred HHcCCEEeccceeeeEEecCCCceEEEEEEC-C-eEEecCEEEEeeChh
Q 017660 97 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIS 143 (368)
Q Consensus 97 ~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g-~~~~ad~VV~a~p~~ 143 (368)
++.|.+++++++|++|..++ +.|.++ + .++.+|+||+|++..
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~-----~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY-----VRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE-----EEEECSSSEEEEECSEEEECCCEE
T ss_pred HhcCcEEEecCEEEEEecCC-----CEEEECCceEEEEcCEEEECCCCC
Confidence 57899999999999996432 234555 4 379999999999863
No 270
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=52.91 E-value=6.9 Score=36.53 Aligned_cols=35 Identities=17% Similarity=0.510 Sum_probs=23.4
Q ss_pred CCCCceEEecccccc--CCCCccchHHhHHHHHHHHH
Q 017660 286 TSFPNLFMAGDWITT--RHGSWSQERSYVTGLEAANR 320 (368)
Q Consensus 286 ~~~~~L~laGd~~~~--~~~~~~~egA~~Sg~~aA~~ 320 (368)
..++||||||+-+.- ..|+-.+..|..||+.|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 367999999954421 11112567799999988864
No 271
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=50.86 E-value=11 Score=35.77 Aligned_cols=53 Identities=15% Similarity=0.095 Sum_probs=36.4
Q ss_pred hhHHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-Ce--EEecCEEEEeeChh
Q 017660 88 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KE--TYSAGAVVLAVGIS 143 (368)
Q Consensus 88 L~~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~--~~~ad~VV~a~p~~ 143 (368)
+...+.+.+ +.|.++++++.|.+|..++ ..+..+..+ ++ ++.+|++|+|++..
T Consensus 163 ~~~~l~~~l-~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 163 VVEELVGKL-NENTKIYLETSALGVFDKG--EYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp HHHHHHHTC-CTTEEEETTEEECCCEECS--SSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred HHHHHHHHH-hcCCEEEcCCEEEEEEcCC--cEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 334444444 5589999999999998766 434333323 54 68999999998864
No 272
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=48.55 E-value=26 Score=32.85 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=28.8
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 306 ~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 306 STNVSGVYAIGDVIP--GP-MLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp BCSSTTEEECSTTSS--SC-CCHHHHHHHHHHHHHHHTTS
T ss_pred ccCCCCEEEEeccCC--CC-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999984 23 24456889999999999863
No 273
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=48.38 E-value=19 Score=33.82 Aligned_cols=37 Identities=16% Similarity=0.198 Sum_probs=29.3
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 314 ~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 314 NSKFPHIKVVGDVTF--GP-MLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp BCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEeeccCC--Cc-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999985 23 24456889999999999874
No 274
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=48.23 E-value=25 Score=33.11 Aligned_cols=37 Identities=19% Similarity=0.282 Sum_probs=29.0
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 313 ~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 313 RTNVPHIYAIGDIVG--QP-MLAHKAVHEGHVAAENCAGH 349 (482)
T ss_dssp BCSSTTEEECGGGTC--SS-CCHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCEEEEEcccC--CC-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999985 23 24456889999999999863
No 275
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=46.88 E-value=26 Score=32.71 Aligned_cols=44 Identities=20% Similarity=0.060 Sum_probs=29.2
Q ss_pred CCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCCCCcccccc
Q 017660 287 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIP 335 (368)
Q Consensus 287 ~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~~~~~~~~~ 335 (368)
.++||||||+-+. .. +.+-|+.+|..|.......+. +++..+.|
T Consensus 327 ~~~~Lf~AGqi~G--~~--Gy~eAaa~Gl~AG~naa~~~~-g~~p~~l~ 370 (443)
T 3g5s_A 327 EAEGLYAAGVLAG--VE--GYLESAATGFLAGLNAARKAL-GLPPVAPP 370 (443)
T ss_dssp TEEEEEECGGGGT--BC--SHHHHHHHHHHHHHHHHHHHT-TCCCCCCC
T ss_pred CCCCEEECccccc--cH--HHHHHHHhHHHHHHHHHHHhc-CCCCCCCC
Confidence 5799999999984 32 345566778888766665554 24444444
No 276
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=45.37 E-value=35 Score=29.70 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=30.9
Q ss_pred CCCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 283 RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 283 ~~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
..+|.++|+|.+||-+..++ ....-|+..|+.||..|.+.+
T Consensus 265 ~~~Ts~pgIyA~GDv~~~~~--~~~~~A~~~G~~AA~~i~~~L 305 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVRDKGL--RQIVTATGDGSIAAQSAAEYI 305 (312)
T ss_dssp TSBCSSTTEEECSTTBSCSC--CSHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecCCCcc--hHHHHHHHHHHHHHHHHHHHH
Confidence 34578899999999885333 245668889999999987654
No 277
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=43.43 E-value=13 Score=36.05 Aligned_cols=41 Identities=22% Similarity=0.192 Sum_probs=29.7
Q ss_pred CCCCceEEeccccccCCCC-----ccchHHhHHHHHHHHHHHHHhC
Q 017660 286 TSFPNLFMAGDWITTRHGS-----WSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~-----~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
++++|||.||+-...-|+. .++-.|++.|++|++.+.+...
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 6899999999987532321 2345578899999998876543
No 278
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=43.25 E-value=44 Score=30.85 Aligned_cols=48 Identities=17% Similarity=0.182 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCEEeccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChh
Q 017660 90 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 143 (368)
Q Consensus 90 ~~l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~ 143 (368)
..+.+.+++.|++++.+ .|++|..++ .. |.++ ++++.+|++|+|++..
T Consensus 60 ~~~~~~~~~~gv~~~~~-~v~~id~~~--~~---v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 60 VPLAPLLPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp EESTTTGGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHHHHHHhcCCEEEEE-EEEEEECCC--CE---EEECCCcEEECCEEEEcCCcc
Confidence 33444566789999975 899997654 42 4454 6679999999998875
No 279
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=43.06 E-value=37 Score=32.04 Aligned_cols=40 Identities=20% Similarity=0.177 Sum_probs=30.7
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+|..+|+|.+||.+. +.+ .....|...|+.||+.|+...
T Consensus 314 ~~t~~~~IyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAE-GRP-ELTPTAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp SBCSSTTEEECGGGBT-TCC-CCHHHHHHHHHHHHHHHHSCC
T ss_pred CccCCCCEEEeEEecC-CCC-cchhHHHHHHHHHHHHHcCCC
Confidence 3467899999999974 233 345678899999999998643
No 280
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=42.96 E-value=35 Score=31.92 Aligned_cols=39 Identities=13% Similarity=0.012 Sum_probs=30.3
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+|..+|+|.+||... .+ .....|...|+.+|+.|+...
T Consensus 294 ~~t~~~~iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~~ 332 (463)
T 4dna_A 294 SRTSTPGIYALGDVTD--RV-QLTPVAIHEAMCFIETEYKNN 332 (463)
T ss_dssp CBCSSTTEEECSGGGS--SC-CCHHHHHHHHHHHHHHHHSSC
T ss_pred CCCCCCCEEEEEecCC--CC-CChHHHHHHHHHHHHHHcCCC
Confidence 3467899999999885 23 345668999999999998643
No 281
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=42.93 E-value=35 Score=31.96 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=29.7
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+++|.+||.... .+ .....|...|..||+.|...
T Consensus 302 ~~t~~~~IyA~GD~~~~-~~-~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 302 FETSIPDVYAIGDVVDK-GP-MLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp SBCSSTTEEECGGGBSS-SC-SCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEeeccCCC-CC-ccHhHHHHHHHHHHHHHcCC
Confidence 34678999999998851 33 34566889999999999863
No 282
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=41.75 E-value=13 Score=36.15 Aligned_cols=43 Identities=16% Similarity=0.294 Sum_probs=31.5
Q ss_pred HHHcCCEEe--ccceeeeEEecCCCceEEEEEEC-CeEEecCEEEEeeChhhHH
Q 017660 96 MRTRGCEFL--DGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTLQ 146 (368)
Q Consensus 96 l~~~G~~i~--~~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~a~p~~~l~ 146 (368)
+.+.++++. ..++|++|.- + | |++. | ++++|.||+|++.....
T Consensus 353 l~~~~V~lvd~~~~~I~~it~-~--g----v~~~dG-~~~~D~iI~ATGf~~~~ 398 (549)
T 4ap3_A 353 YNRDNVELVDLRSTPIVGMDE-T--G----IVTTGA-HYDLDMIVLATGFDAMT 398 (549)
T ss_dssp GGSTTEEEEETTTSCEEEEET-T--E----EEESSC-EEECSEEEECCCEEESS
T ss_pred hcCCCEEEEeCCCCCceEEeC-C--c----EEeCCC-ceecCEEEECCcccccc
Confidence 456678887 3589999863 2 3 3444 6 99999999999997543
No 283
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=41.72 E-value=31 Score=32.45 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.5
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+|+|.+||.+. +.+ .....|...|+.||+.|+..
T Consensus 314 ~~t~~~~IyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 314 EATNVANIYAVGDIIY-GKP-ELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CBCSSTTEEECSTTBT-TSC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEcccC-CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 3567899999999974 223 35567889999999999864
No 284
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=41.63 E-value=14 Score=35.89 Aligned_cols=40 Identities=23% Similarity=0.290 Sum_probs=29.1
Q ss_pred CCCCceEEeccccccCCCC-----ccchHHhHHHHHHHHHHHHHh
Q 017660 286 TSFPNLFMAGDWITTRHGS-----WSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~-----~~~egA~~Sg~~aA~~Il~~~ 325 (368)
++++|||.||+-...-|+. .++-.|+..|++|++.+.+..
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 6899999999987532321 244557889999999887653
No 285
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=41.58 E-value=33 Score=32.24 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=30.1
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+|+|.+||... .+ .....|...|+.||+.|+..
T Consensus 319 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVCG--KA-LLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CBCSSTTEEECGGGGC--SS-CCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEEecCC--CC-ccHhHHHHHHHHHHHHHcCC
Confidence 3467899999999883 33 35567889999999999875
No 286
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=41.56 E-value=41 Score=31.67 Aligned_cols=39 Identities=10% Similarity=0.038 Sum_probs=29.5
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+|..+|+|.+||... .+ .....|...|+.+|+.|+...
T Consensus 314 ~~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~~ 352 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVTG--HI-QLTPVAIHDAMCFVKNAFENT 352 (484)
T ss_dssp SBCSSTTEEECGGGGT--SC-CCHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCCCEEEEEecCC--CC-cCHHHHHHHHHHHHHHHcCCC
Confidence 3467899999999885 23 345668899999999998653
No 287
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=41.24 E-value=13 Score=36.16 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=29.4
Q ss_pred CCCCceEEeccccccCCC-----CccchHHhHHHHHHHHHHHHHh
Q 017660 286 TSFPNLFMAGDWITTRHG-----SWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~-----~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
++++|||.||+-...-|+ ..++-.|+..|++|++.+.+..
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 689999999998753232 1345568889999999887653
No 288
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=40.66 E-value=22 Score=34.86 Aligned_cols=44 Identities=23% Similarity=0.218 Sum_probs=30.9
Q ss_pred CCCCCCCCceEEecccccc-CCCC-----ccchHHhHHHHHHHHHHHHHh
Q 017660 282 MRGFTSFPNLFMAGDWITT-RHGS-----WSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 282 p~~~~~~~~L~laGd~~~~-~~~~-----~~~egA~~Sg~~aA~~Il~~~ 325 (368)
....++++|||.||+.... -|+. .++-.|+..|+.|++.+.+..
T Consensus 366 ~~~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 366 QNCETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp TTSBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 3345689999999997632 2321 234557888999999887765
No 289
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=40.52 E-value=35 Score=31.99 Aligned_cols=37 Identities=24% Similarity=0.266 Sum_probs=28.9
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|...
T Consensus 298 ~t~~~~Iya~GD~~~--~~-~l~~~A~~~g~~aa~~i~g~ 334 (464)
T 2eq6_A 298 ETSVPGVYAIGDAAR--PP-LLAHKAMREGLIAAENAAGK 334 (464)
T ss_dssp BCSSTTEEECGGGTC--SS-CCHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCEEEEeccCC--Cc-ccHHHHHHHHHHHHHHhcCC
Confidence 467899999999984 23 24456889999999999863
No 290
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=40.38 E-value=13 Score=33.42 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=28.5
Q ss_pred CCCceEEecccccc--CCC-C-ccchHHhHHHHHHHHHHHHHhC
Q 017660 287 SFPNLFMAGDWITT--RHG-S-WSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 287 ~~~~L~laGd~~~~--~~~-~-~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
-+|+||++|..... +.+ + ..+-|-+.||..||+.|++++.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 36899999976631 111 1 3455667899999999999864
No 291
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=40.16 E-value=43 Score=31.97 Aligned_cols=39 Identities=18% Similarity=0.151 Sum_probs=30.2
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+|+|.+||.... .+ .....|...|+.||+.|+..
T Consensus 342 ~~Ts~~~IyA~GD~~~g-~~-~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILED-KV-ELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp SBCSSTTEEECGGGBSS-SC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEeccCC-CC-ccHHHHHHHHHHHHHHHcCC
Confidence 34678999999999842 23 35567889999999999864
No 292
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=40.06 E-value=37 Score=31.80 Aligned_cols=39 Identities=21% Similarity=0.302 Sum_probs=30.5
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+|..+|+|.+||... .+ .....|...|+.||+.|....
T Consensus 306 ~~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 306 CATSVPGVYAIGDVVR--GA-MLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp SBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCCEEEEEccCC--Cc-ccHHHHHHHHHHHHHHhcCCC
Confidence 3467899999999984 23 345678899999999998654
No 293
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=39.67 E-value=28 Score=32.64 Aligned_cols=38 Identities=24% Similarity=0.216 Sum_probs=30.1
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+|+|.+||.... + .....|...|+.||+.|+..
T Consensus 296 ~~t~~~~Iya~GD~~~~--~-~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 296 MKTNIPNVFATGDANGL--A-PYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CBCSSTTEEECGGGTCS--C-CSHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEEEecCCC--C-ccHhHHHHHHHHHHHHHhCC
Confidence 34678999999999852 3 34567899999999999964
No 294
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.27 E-value=62 Score=30.17 Aligned_cols=44 Identities=18% Similarity=0.240 Sum_probs=32.1
Q ss_pred HHHHHHHcCCEEeccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChh
Q 017660 92 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 143 (368)
Q Consensus 92 l~~~l~~~G~~i~~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~ 143 (368)
+.+.+++.|++++.++.+. + +. .. |.++++++.+|++|+|++..
T Consensus 102 ~~~~~~~~gv~~~~g~~~~-~--~~--~~---v~v~~~~~~~d~lviATGs~ 145 (458)
T 1lvl_A 102 VAALLKKHGVKVVHGWAKV-L--DG--KQ---VEVDGQRIQCEHLLLATGSS 145 (458)
T ss_dssp HHHHHHHTTCEEECSCEEE-E--ET--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHHHhCCcEEEEEEEEE-c--cC--CE---EEEeeEEEEeCEEEEeCCCC
Confidence 3455677899999998764 2 33 43 44556789999999999874
No 295
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=39.23 E-value=31 Score=32.69 Aligned_cols=38 Identities=24% Similarity=0.116 Sum_probs=29.8
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 301 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 301 LQTSVDHIFVAGDANN--TL-TLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp CBCSSTTEEECGGGGT--SS-CSHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCEEEEEecCC--CC-ccHHHHHHHHHHHHHHHcCC
Confidence 3467899999999985 23 24457889999999999873
No 296
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=37.82 E-value=33 Score=32.38 Aligned_cols=39 Identities=15% Similarity=0.152 Sum_probs=30.5
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.+|..+|+|.+||... .+ .....|...|+.||+.|....
T Consensus 326 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 326 FQTSIAGVYAIGDVVR--GP-MLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp CBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCEEEEEecCC--Cc-cchhHHHHHHHHHHHHHcCCC
Confidence 3467899999999884 23 355678899999999998643
No 297
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=37.81 E-value=15 Score=35.06 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=27.4
Q ss_pred CCCCceEEeccccccCC----CC-ccchHHhHHHHHHHHHHHH
Q 017660 286 TSFPNLFMAGDWITTRH----GS-WSQERSYVTGLEAANRVVD 323 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~----~~-~~~egA~~Sg~~aA~~Il~ 323 (368)
++++|||.||+-+..-| .. .++-.|++.|++|++.+.+
T Consensus 466 ~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 466 EPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp SEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 68999999999774322 21 3445678999999988754
No 298
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=37.12 E-value=36 Score=32.19 Aligned_cols=37 Identities=16% Similarity=0.008 Sum_probs=29.0
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 306 ~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 306 RTLATGIYAAGDCTG--LL-PLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp BCSSTTEEECSGGGT--SC-SCHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCEEEEeccCC--Cc-ccHHHHHHHHHHHHHHhcCC
Confidence 467899999999984 33 24456889999999999864
No 299
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=34.96 E-value=32 Score=32.03 Aligned_cols=37 Identities=19% Similarity=0.309 Sum_probs=28.9
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
++..+++|.+||... .+ .....|...|..+|+.|...
T Consensus 291 ~t~~~~iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 291 RTRVPHIYAIGDVVR--GP-MLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp BCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEecCCC--Cc-cCHHHHHHhHHHHHHHHcCC
Confidence 456799999999985 23 24456889999999999874
No 300
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=34.95 E-value=24 Score=34.01 Aligned_cols=47 Identities=15% Similarity=0.303 Sum_probs=32.4
Q ss_pred HHHHHHHcCCEEe--ccceeeeEEecCCCceEEEEEECCeEEecCEEEEeeChhhH
Q 017660 92 WMDSMRTRGCEFL--DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 145 (368)
Q Consensus 92 l~~~l~~~G~~i~--~~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~a~p~~~l 145 (368)
+.+.+++.++++. .+++|++|. ++ | |++.++++++|.||+|++....
T Consensus 344 y~~~~~~~~v~lv~~~~~~i~~i~--~~-g----v~~~d~~~~~D~ii~atG~~~~ 392 (542)
T 1w4x_A 344 YYEMFNRDNVHLVDTLSAPIETIT--PR-G----VRTSEREYELDSLVLATGFDAL 392 (542)
T ss_dssp HHHHTTSTTEEEEETTTSCEEEEC--SS-E----EEESSCEEECSEEEECCCCCCT
T ss_pred HHHHhCCCCEEEEecCCCCceEEc--CC-e----EEeCCeEEecCEEEEcCCcccc
Confidence 3344555567776 478899985 31 3 3444478999999999999763
No 301
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=34.88 E-value=35 Score=33.65 Aligned_cols=40 Identities=25% Similarity=0.334 Sum_probs=24.7
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
.++++|||.||+....+.. ...-+++..|+.|++.+.+..
T Consensus 428 ~t~I~GLyAaGe~a~~~~~-r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPH-KFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeecccccccc-ccchhHHHHHHHHHHHHHHHH
Confidence 4789999999998864221 122345556666665555443
No 302
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=34.15 E-value=30 Score=32.48 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=29.8
Q ss_pred CCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 286 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
+..+|+|.+||.... .. +.+..|...|..+|..|+.++.
T Consensus 349 t~~pgvya~GD~~~g-p~-~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 349 NGSPNEYVVGWIKRG-PT-GVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp TTCSSEEECTHHHHC-SC-SCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCCC-Cc-hhHHHHHHHHHHHHHHHHHHHH
Confidence 467999999998752 22 2344588899999999998875
No 303
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=33.83 E-value=53 Score=31.86 Aligned_cols=38 Identities=18% Similarity=0.125 Sum_probs=29.6
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+|+|.+||.... .+ .....|...|+.||+.|+..
T Consensus 422 ~ts~~~VyA~GD~~~~-~~-~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 422 QTTVSNVYAIGDINAG-KP-QLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp BCSSTTEEECGGGBTT-SC-CCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCEEEEeeecCC-CC-ccHHHHHHhHHHHHHHHhcC
Confidence 4678999999999642 23 35567889999999999864
No 304
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=33.31 E-value=51 Score=30.66 Aligned_cols=37 Identities=14% Similarity=0.139 Sum_probs=29.1
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.+|+.|+..
T Consensus 292 ~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 292 NTNIEGIYAVGDNTG--AV-ELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp BCSSTTEEECSGGGT--SC-CCHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEeccCC--CC-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999984 22 24566889999999999863
No 305
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=32.75 E-value=53 Score=30.84 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=29.2
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 311 ~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 311 NTNVPNIYSLGDVVG--KV-ELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp BCSSTTEEECGGGTT--SS-CCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCEEEEEecCC--Cc-ccHHHHHHHHHHHHHHhcCC
Confidence 467899999999974 23 34567889999999999854
No 306
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=32.52 E-value=34 Score=33.99 Aligned_cols=44 Identities=25% Similarity=0.314 Sum_probs=30.2
Q ss_pred CCCCCCCCceEEecccccc-CCC-----CccchHHhHHHHHHHHHHHHHh
Q 017660 282 MRGFTSFPNLFMAGDWITT-RHG-----SWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 282 p~~~~~~~~L~laGd~~~~-~~~-----~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
....++++|||.||+.... -|+ ..++-.|++.|+.|++.+.+..
T Consensus 379 ~~~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 379 YRGEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp TTSBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 3345689999999996431 232 1344557888999998887665
No 307
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=32.43 E-value=23 Score=31.68 Aligned_cols=73 Identities=15% Similarity=0.088 Sum_probs=44.2
Q ss_pred HHHHHHHHHHhhhccCCCCCceeeeEEeecCCCccccCCCCcCCCCCC--CCCCCceEEeccccccCCCCccchHHhHHH
Q 017660 237 QVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTG 314 (368)
Q Consensus 237 e~~~~~~~~l~~~~p~~~~~~i~~~~~~~~~~~~~~~~pg~~~~~p~~--~~~~~~L~laGd~~~~~~~~~~~egA~~Sg 314 (368)
+..+.+++.+.++||++. ++.. .| .+....+|+.. |.. ....+|+|++..+. ++| +.-|..+|
T Consensus 283 ~~~~~l~~~~~~~~P~l~--~~~~----~~-~g~r~~t~d~~---p~ig~~~~~~~l~~~~G~~--g~G---~~~ap~~g 347 (372)
T 2uzz_A 283 SDGSEAFPFLRNVLPGIG--CCLY----GA-ACTYDNSPDED---FIIDTLPGHDNTLLITGLS--GHG---FKFASVLG 347 (372)
T ss_dssp TGGGSSHHHHHHHSCSCC--CEEE----EC-CCEEEECTTSC---CCEEEETTEEEEEEECCCC--SCC---GGGHHHHH
T ss_pred HHHHHHHHHHHHHCCCCC--ccce----ee-EEeeccCCCCC---eEEecCCCCCCEEEEeCCC--ccc---hhccHHHH
Confidence 345678889999999986 2321 23 22223344432 221 12357899887555 333 34477899
Q ss_pred HHHHHHHHHH
Q 017660 315 LEAANRVVDY 324 (368)
Q Consensus 315 ~~aA~~Il~~ 324 (368)
+.+|+.|+..
T Consensus 348 ~~la~~i~~~ 357 (372)
T 2uzz_A 348 EIAADFAQDK 357 (372)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCC
Confidence 9999998754
No 308
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=32.41 E-value=46 Score=31.16 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=29.6
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
.+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 308 ~~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVVA--GP-MLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp CBCSSTTEEECGGGSS--SC-CCHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCEEEeeecCC--CC-ccHHHHHHHHHHHHHHhcCC
Confidence 3467899999999884 33 24466889999999999864
No 309
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=32.22 E-value=49 Score=31.93 Aligned_cols=41 Identities=20% Similarity=0.175 Sum_probs=31.8
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
.+|..+++|.+||-+. +++ .....|...|+.+++.|+....
T Consensus 346 ~~Ts~p~IyAiGDv~~-~~p-~La~~A~~eg~~aa~~i~g~~~ 386 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVAE-NVP-ELAPVAIKAGEILARRLFKDSD 386 (542)
T ss_dssp SBCSSTTEEECTTSBT-TCC-CCHHHHHHHHHHHHHHHHSCCC
T ss_pred ccccCCCeEEeccccC-Cch-hHHHHHHHHHHHHHHHHhcCCC
Confidence 3578899999999985 344 3556688899999999987543
No 310
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=31.66 E-value=23 Score=32.01 Aligned_cols=39 Identities=15% Similarity=0.241 Sum_probs=28.5
Q ss_pred CCceEEecccccc--CCC-C-ccchHHhHHHHHHHHHHHHHhC
Q 017660 288 FPNLFMAGDWITT--RHG-S-WSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 288 ~~~L~laGd~~~~--~~~-~-~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
.||||.+|-..+. |.+ + ..+-|-+.||..||+.|++.++
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 4899999977642 111 1 3445567899999999999987
No 311
>3pru_C Phycobilisome 32.1 kDa linker polypeptide, phycoc associated, ROD 1; structural genomics, PSI-biology; 2.68A {Synechocystis SP} PDB: 2l8v_A
Probab=31.42 E-value=1e+02 Score=24.16 Aligned_cols=25 Identities=24% Similarity=0.292 Sum_probs=20.7
Q ss_pred cCccHHHHHHHcCCCHHHHHHHHHH
Q 017660 18 DSITARELFKQFGCSERLYRNVIGP 42 (368)
Q Consensus 18 d~~S~~d~l~~~~~~~~~~~~~~~~ 42 (368)
.++|++||++....|+...+.++++
T Consensus 53 G~ItVReFVR~LakSe~Yr~~f~~~ 77 (154)
T 3pru_C 53 GSISVREFVRTVAKSELYKKKFLYN 77 (154)
T ss_dssp TSSCHHHHHHHHHTSHHHHHHHTTT
T ss_pred CCcCHHHHHHHHHcCHHHHHHhccC
Confidence 6799999999998888877766643
No 312
>2ky4_A Phycobilisome linker polypeptide; NESG, PSI, structural genomics, protein structure initiative northeast structural genomics consortium; NMR {Nostoc SP}
Probab=30.31 E-value=1e+02 Score=23.96 Aligned_cols=24 Identities=21% Similarity=0.380 Sum_probs=19.9
Q ss_pred cCccHHHHHHHcCCCHHHHHHHHH
Q 017660 18 DSITARELFKQFGCSERLYRNVIG 41 (368)
Q Consensus 18 d~~S~~d~l~~~~~~~~~~~~~~~ 41 (368)
.++|++||++..+.|+...+.+++
T Consensus 51 G~IsVReFVR~LakS~~Yr~~f~~ 74 (149)
T 2ky4_A 51 GEITVKEFIEGLGYSNLYLKEFYT 74 (149)
T ss_dssp TSSCHHHHHHHHHHCHHHHHHHTS
T ss_pred CCccHHHHHHHHHcCHHHHHHhcc
Confidence 679999999998888887776653
No 313
>3ohw_B Phycobilisome LCM core-membrane linker polypeptid; structural genomics, PSI-biology; 2.70A {Synechocystis SP}
Probab=29.99 E-value=90 Score=24.28 Aligned_cols=24 Identities=21% Similarity=0.439 Sum_probs=20.0
Q ss_pred cCccHHHHHHHcCCCHHHHHHHHH
Q 017660 18 DSITARELFKQFGCSERLYRNVIG 41 (368)
Q Consensus 18 d~~S~~d~l~~~~~~~~~~~~~~~ 41 (368)
.++|++||++....|+...+.+++
T Consensus 60 G~IsVReFVR~LakS~~Yr~~f~~ 83 (148)
T 3ohw_B 60 NEINVKEFIEGLGTSELYMKEFYA 83 (148)
T ss_dssp TSSCHHHHHHHHHTSHHHHHHHTS
T ss_pred CCcCHHHHHHHHHcCHHHHHHhcc
Confidence 679999999999988887776653
No 314
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=29.39 E-value=69 Score=29.88 Aligned_cols=37 Identities=22% Similarity=0.271 Sum_probs=28.8
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+|+|.+||... .+ .....|...|+.+|+.|+..
T Consensus 291 ~t~~~~Iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~g~ 327 (463)
T 2r9z_A 291 NTNVPGVYALGDITG--RD-QLTPVAIAAGRRLAERLFDG 327 (463)
T ss_dssp BCSSTTEEECGGGGT--SC-CCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCEEEEeecCC--Cc-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999984 23 24566889999999999853
No 315
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=29.29 E-value=47 Score=34.85 Aligned_cols=39 Identities=26% Similarity=0.256 Sum_probs=31.0
Q ss_pred CCCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHh
Q 017660 284 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 284 ~~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
..|..+|+|.+||-.. .+ .....|+..|+.||..|.+.+
T Consensus 469 ~~Ts~~~VfA~GD~~~--~~-~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIVG--MA-NTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp CBCSSTTEEECSGGGC--SC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCCC--Cc-hHHHHHHHHHHHHHHHHHHHH
Confidence 3467899999999985 23 356678899999999998754
No 316
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=29.16 E-value=69 Score=30.25 Aligned_cols=37 Identities=19% Similarity=0.220 Sum_probs=29.2
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.||+.|+..
T Consensus 319 ~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 319 RTNVPNIYAIGDITD--RL-MLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp BCSSTTEEECGGGGC--SC-CCHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCCEEEEeccCC--Cc-cCHHHHHHHHHHHHHHhcCC
Confidence 467899999999984 22 24566889999999999863
No 317
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=28.97 E-value=70 Score=30.16 Aligned_cols=37 Identities=16% Similarity=0.134 Sum_probs=29.4
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
+|..+++|.+||... .+ .....|...|+.+|+.|+..
T Consensus 315 ~t~~~~IyA~GD~~~--~~-~l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 315 KTNVDNIYAIGDVTD--RV-MLTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp BCSSTTEEECGGGGC--SC-CCHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCCEEEEeccCC--Cc-cCHHHHHHHHHHHHHHhcCC
Confidence 467899999999984 23 34567889999999999863
No 318
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=28.55 E-value=57 Score=31.05 Aligned_cols=36 Identities=31% Similarity=0.366 Sum_probs=28.9
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 323 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~ 323 (368)
+|..+++|.+||... .+ .....|...|+.||+.|..
T Consensus 342 ~t~~~~IyA~GD~~~--~~-~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 342 QTSVPNVYAVGDLIG--GP-MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp BCSSTTEEECGGGGC--SS-CSHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEeecCC--Cc-ccHHHHHHHHHHHHHHHcC
Confidence 467899999999995 23 2456688999999999986
No 319
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=27.48 E-value=61 Score=30.21 Aligned_cols=37 Identities=27% Similarity=0.203 Sum_probs=29.1
Q ss_pred CCCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 285 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 285 ~~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
++..+++|.+||... .+ .....|...|..+|..|+..
T Consensus 298 ~t~~~~iya~GD~~~--~~-~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 298 RTSNPNIYAAGDCTD--QP-QFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp BCSSTTEEECSTTBS--SC-CCHHHHHHHHHHHHHHHTTC
T ss_pred ccCCCCEEEEeccCC--Cc-ccHHHHHHHHHHHHHHHcCC
Confidence 467899999999985 33 34566889999999999764
No 320
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=27.21 E-value=41 Score=31.57 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=29.7
Q ss_pred CCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 288 FPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 288 ~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
.+++|.+||.... .. +.+..|...|..+|..|+.++..
T Consensus 359 ~p~vya~Gd~~~g-~~-~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKRG-PT-GVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHHC-TT-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcC-CC-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999998852 22 23556889999999999998853
No 321
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=26.93 E-value=70 Score=31.41 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=30.4
Q ss_pred CCCCceEEeccccc-cCCC-----CccchHHhHHHHHHHHHHHHHhC
Q 017660 286 TSFPNLFMAGDWIT-TRHG-----SWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 286 ~~~~~L~laGd~~~-~~~~-----~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
++++|||.||+... .-|+ ..++-.+++.|+.|++.+.+...
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 433 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK 433 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 57999999999653 2232 24556688899999999987764
No 322
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=24.95 E-value=63 Score=33.64 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=31.4
Q ss_pred CCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 286 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
+..+++|.+||... .+ .+..|+..|..||..|...++.
T Consensus 408 ts~p~IyAaGD~a~--~~--~l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 408 DAVANQHLAGAMTG--RL--DTASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp SCCTTEEECGGGGT--CC--SHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEecCC--ch--hHHHHHHHHHHHHHHHHHHcCC
Confidence 56799999999884 33 2347889999999999999885
No 323
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=24.34 E-value=70 Score=30.38 Aligned_cols=37 Identities=14% Similarity=-0.018 Sum_probs=30.2
Q ss_pred CCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHH
Q 017660 287 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 324 (368)
Q Consensus 287 ~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~ 324 (368)
..+|+|.+||.....+| .+-..|...|..+|+.|.+.
T Consensus 363 ~~~~IfAiGD~a~~~~p-~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLP-PTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSC-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCC-CchHHHHHHHHHHHHHHHHH
Confidence 67999999998865666 46677889999999998764
No 324
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=24.17 E-value=33 Score=34.10 Aligned_cols=37 Identities=16% Similarity=0.049 Sum_probs=30.0
Q ss_pred CCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhC
Q 017660 286 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 326 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~ 326 (368)
+..+++|.+||...+ ..+..|+..|..||..|.+.+.
T Consensus 639 t~~~~VyaiGD~~~~----~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 639 GEIASVRGIGDAWAP----GTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp TSCSEEEECGGGTSC----BCHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCCEEEEeCCCch----hhHHHHHHHHHHHHHHHHhhcc
Confidence 357899999999864 2445699999999999998865
No 325
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=23.62 E-value=46 Score=28.69 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=30.1
Q ss_pred CCceEEecccccc--C---CCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 288 FPNLFMAGDWITT--R---HGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 288 ~~~L~laGd~~~~--~---~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
.+++|.+|+.+.. + .+ .+..+++.||..+|..|.+.+..
T Consensus 233 ~p~i~a~G~~~~~~~g~~~~g-p~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 233 VPGMIVTGMEVAEIDGAPRMG-PTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp ETTEEECTHHHHHHHTCEECC-SCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCEEEEeeehhhhcCCCCcC-hHHHHHHHhHHHHHHHHHHHhhh
Confidence 4899999987632 1 12 35678999999999999999874
No 326
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=22.78 E-value=36 Score=34.17 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=29.9
Q ss_pred CCCCceEEeccccccCCCCccchHHhHHHHHHHHHHHHHhCC
Q 017660 286 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 327 (368)
Q Consensus 286 ~~~~~L~laGd~~~~~~~~~~~egA~~Sg~~aA~~Il~~~~~ 327 (368)
|..+++|.+||...+ ..+..|+..|..||..|.+.+..
T Consensus 664 t~~~~VyAiGD~~~~----~~~~~A~~~G~~aA~~i~~~l~~ 701 (729)
T 1o94_A 664 NDIKGIYLIGDAEAP----RLIADATFTGHRVAREIEEANPQ 701 (729)
T ss_dssp GTCCEEEECGGGTSC----CCHHHHHHHHHHHHHTTTSSCTT
T ss_pred cCCCCeEEEeCccch----hhHHHHHHHHHHHHHHhhhhccc
Confidence 467899999998853 34566999999999999876543
No 327
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=22.56 E-value=87 Score=29.65 Aligned_cols=42 Identities=21% Similarity=0.274 Sum_probs=26.2
Q ss_pred EEeccceeeeEEecCCCceEE-----------EEEE-CCeEEecCEEEEeeChh
Q 017660 102 EFLDGRRVTDFIYDEERCCIS-----------DVVC-GKETYSAGAVVLAVGIS 143 (368)
Q Consensus 102 ~i~~~t~V~~I~~~~~~g~v~-----------~v~~-~g~~~~ad~VV~a~p~~ 143 (368)
.+..++.|..+......+++. ++.. +|+++++|.||+|++..
T Consensus 355 ~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~ 408 (501)
T 4b63_A 355 RILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYN 408 (501)
T ss_dssp EEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEE
T ss_pred eecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCC
Confidence 567777777776543323332 1112 25689999999999984
No 328
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=21.09 E-value=36 Score=33.15 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=27.3
Q ss_pred CCCceEEeccccc-cCCC-----CccchHHhHHHHHHHHHHHHHh
Q 017660 287 SFPNLFMAGDWIT-TRHG-----SWSQERSYVTGLEAANRVVDYL 325 (368)
Q Consensus 287 ~~~~L~laGd~~~-~~~~-----~~~~egA~~Sg~~aA~~Il~~~ 325 (368)
+++|||.||+... .-|+ ..++-.|++.|+.|++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 7999999999653 2232 1335557888999988876654
Done!