BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017664
(368 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54NS9|AIFA_DICDI Apoptosis-inducing factor homolog A OS=Dictyostelium discoideum
GN=aifA PE=3 SV=1
Length = 408
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 200/384 (52%), Gaps = 31/384 (8%)
Query: 3 VWLWGSTAAGLVEKKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEYFEITWASLRAVVE 62
++ + S+ EKK+V++IG G GGS +A + S +V +++ K+ F + AS+RA+VE
Sbjct: 14 IFNYFSSITRDCEKKRVLIIGCGFGGSQVAKLLDSNFEVTVVERKQTFFNSIASIRAIVE 73
Query: 63 PSFAVRSVINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVP-KS 121
P A + I + L N K + T + I+ T V G+ +DY+V+ATG P K+
Sbjct: 74 PELAKKIYIPYDKLLKNGKFIYGTVIEISPTLVKLEDGKELTFDYLVIATGSNSLAPFKA 133
Query: 122 RTERLS-----QYEKDF-EKVKSANSVLIVGGGPTGVELAGEIAVDFP------DKKVIL 169
E++S Y KD E++K A S+LIVGGG G E+ GEI +P KK+ +
Sbjct: 134 PLEKISGTEIFNYYKDISEQIKQAKSILIVGGGSVGCEVVGEIINKYPIKNKELAKKITI 193
Query: 170 VHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVT---------LNTISDGL----- 214
VH G KL+ ++ + + + + + V VILN + +N S
Sbjct: 194 VHSGNKLVSSKTNNKFNNLINESMKKRNVSVILNDRIEIPDDIKQCFINQTSPNFQVSLK 253
Query: 215 -IETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAI 273
+T +G +I++D G + S + T + ++ G++ V+++ +V+G+ N+FAI
Sbjct: 254 TYKTKNGLSIESDFVIWTIGIKLNSESYK-TNFSNEINEIGQIKVNQSCQVQGYDNIFAI 312
Query: 274 GDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIALVSLGRREGVAH 333
GDITD E+K Y A H + AK +K L G+NK +A +K PI +SLG ++G+
Sbjct: 313 GDITDFDELKTTYNALSHGNIVAKVIKDLSNGKNKNQLAKHKLLPPIISLSLGPKDGLTQ 372
Query: 334 F-PFLTISGRIPGWIKSRDLFVGK 356
L I +KS +L + +
Sbjct: 373 INSNLNFGSFISRILKSNNLLINR 396
>sp|Q54NS8|AIFB_DICDI Apoptosis-inducing factor homolog B OS=Dictyostelium discoideum
GN=aifB PE=3 SV=1
Length = 387
Score = 164 bits (414), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 187/379 (49%), Gaps = 33/379 (8%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSFADVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHG 74
EKK+V++IGGG GG +A + S +V +++ K+ F + S+RAVVEP + I +
Sbjct: 4 EKKRVLIIGGGYGGCEVAKQLDSKFNVTVVERKQTFFHSVGSVRAVVEPELVKKIYIPYD 63
Query: 75 DYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVP-------KSRTERLS 127
L N K + T + I+ T GQ +DY+V+ATG P KS +E L+
Sbjct: 64 KLLKNGKFIFGTVIEISPTLAKLEDGQELTFDYLVIATGSNSLAPFKAPLEKKSSSEILN 123
Query: 128 QYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFP------DKKVILVHRGPKLLE-FV 180
++ +++K A S+LIVGGG EL EI +P KK+ +VH G KL+ +
Sbjct: 124 YFQNFSQQIKQAKSILIVGGGAVACELVSEIVEKYPVKDSELVKKITIVHSGSKLVNPKM 183
Query: 181 GSRASQIALDWLTSKKVEVILNQSVTLN---------------TISDGLIETSSGETIDT 225
+ + + + + VEVILN +T+ IS T G I
Sbjct: 184 NDKFTNVVSKAMKKRNVEVILNDRITMPDEIKANLLNQTSPNIQISSQNYTTEKGVPIQA 243
Query: 226 DCHFMCTG-KAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQ 284
D G K + S+ ++ + ++ G+L V+ + +V+G+ NVFAIGD TD E K
Sbjct: 244 DLIIWTVGIKTNSESY--QSHFSNVINESGQLKVNLSCQVQGYNNVFAIGDCTDFDEFKT 301
Query: 285 GYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIALVSLGRREGVAHF-PFLTISGRI 343
Y A HA + AK + L G++ +A +K PI +SLG ++G+ P + +
Sbjct: 302 AYNAGYHAAIAAKAIDALSKGKSNDKLAKHKVSGPILSLSLGPQDGITQISPTMCLGSFA 361
Query: 344 PGWIKSRDLFVGKTRKQLG 362
IKS+ LF+ + QL
Sbjct: 362 TKMIKSKSLFIDRYISQLN 380
>sp|B5FXE5|AIFM2_TAEGU Apoptosis-inducing factor 2 OS=Taeniopygia guttata GN=AIFM2 PE=2
SV=1
Length = 373
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 172/340 (50%), Gaps = 27/340 (7%)
Query: 42 VLIDEKEYFEITWASLRAVVEPSFAVRSVINH----GDYLSNVKIVVSTAVSITDTEVVT 97
VL+D ++ F A+LRA VE FA ++ I++ GD K+V A+ +VV
Sbjct: 37 VLVDVRDAFHHNVAALRAAVESGFAKKTFISYSVTFGDSFRQGKVV---AIDPGRQQVVL 93
Query: 98 AGGQTFVYDYVVVATGHVESVPKSRTE------RLSQYEKDFEKVKSANSVLIVGGGPTG 151
+ G+ Y ++++ATG P + + YE ++++ + +L+VGGG G
Sbjct: 94 SDGEELHYSHLILATGSDGPFPGKFNQVIDMESAIQTYEDMVKEIEKSQRILVVGGGAAG 153
Query: 152 VELAGEIAVDFPDKKVILVHRGPKL--LEFVGSRASQIALDWLTSKKVEVILNQSVT--- 206
VE+A EI ++P K++IL+H L +E + S Q+ + L K V ++L++ V+
Sbjct: 154 VEMAAEIKTEYPGKEIILIHSKTALADVELLPS-VRQVVKEILLRKGVRLLLSEKVSDIE 212
Query: 207 ---LNTIS-DGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL 262
N D ++ T G + D +CTG + SS D + G L V+++L
Sbjct: 213 NLRPNQFQKDMVVRTEKGTEVVVDMVVLCTGIKINSSAY-AAAFGDKMASDGALKVNKHL 271
Query: 263 RVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIAL 322
++ G++N++AIGD D+ E K Y A HA V N ++ + + TY+PG L
Sbjct: 272 QLEGYENIYAIGDCADLKEPKMAYHAGLHANVVVTN---IINSLTQKPLKTYEPGSLTFL 328
Query: 323 VSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLG 362
+S+GR +GV + + KSRDLFV K+ + +G
Sbjct: 329 LSMGRNDGVGQVNGYYVGRLLVTIAKSRDLFVSKSWRTMG 368
>sp|Q6GLW8|AIFM2_XENLA Apoptosis-inducing factor 2 OS=Xenopus laevis GN=aifm2 PE=2 SV=1
Length = 374
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 176/337 (52%), Gaps = 20/337 (5%)
Query: 42 VLIDEKEYFEITWASLRAVVEPSFAVRSVINHGD-YLSNVKIVVSTAVSITDTEVVTAGG 100
+L+D K+ F A+LRA VE FA ++ I++ D + + K +++ V+
Sbjct: 37 LLVDMKDAFHHNVAALRACVESGFARKTFISYKDSFHDSFKQGKVVGINLQTQLVILESN 96
Query: 101 QTFVYDYVVVATGHVESVPKSRTERLSQ------YEKDFEKVKSANSVLIVGGGPTGVEL 154
+ + ++++ATG P E +S+ YE E+++ A V++VGGG GVE+
Sbjct: 97 EELSFSHLIIATGSNGPFPGKFNEVISKDQAIQIYENLVEEIQKAKHVVVVGGGSAGVEM 156
Query: 155 AGEIAVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVT-LNTISD 212
A E+ D+P+K+V L+H L + + + + L K V +IL Q VT L+ ++
Sbjct: 157 AAEVKTDYPEKEVTLIHSKIALADVQLQPSVRRTVKEILLRKGVRLILAQKVTNLDQVTP 216
Query: 213 GLIETS-------SGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVR 265
+ + + E ++ D C G ++SS R + L D + G L+V++ L+V+
Sbjct: 217 NVAQENMELQLDKDSEVVNCDLVLCCIGLKVSSSSYR-SALGDKMAEDGSLIVNDYLQVQ 275
Query: 266 GFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIALVSL 325
G +NV+A+GD I E K Y A HA V A N++ ++G+ ++ +Y PG L+S+
Sbjct: 276 GHENVYAVGDCAYINEPKMAYYAGIHARVAATNVRNSLIGK---SLKSYIPGALSMLLSM 332
Query: 326 GRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLG 362
GR +GV F + KSRD+FV K+ K++G
Sbjct: 333 GRNDGVGQFNGYYLGRCFVTMAKSRDIFVSKSWKEMG 369
>sp|B4F6I3|AIFM2_XENTR Apoptosis-inducing factor 2 OS=Xenopus tropicalis GN=aifm2 PE=2
SV=1
Length = 374
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 175/337 (51%), Gaps = 20/337 (5%)
Query: 42 VLIDEKEYFEITWASLRAVVEPSFAVRSVINHGD-YLSNVKIVVSTAVSITDTEVVTAGG 100
VL+D K+ F A+LRA VE FA ++ I++ D + N +++ V+
Sbjct: 37 VLVDLKDAFHHNVAALRASVESGFARKTFISYKDTFQDNFIQGKVVGINLQTQRVILESN 96
Query: 101 QTFVYDYVVVATGHVESVPK------SRTERLSQYEKDFEKVKSANSVLIVGGGPTGVEL 154
+ + ++++ATG P S+ + + YE ++++ A V++VGGG GVE+
Sbjct: 97 EELQFSHLIIATGSNGPFPGKINNVISKDQAIQVYEDLVKEIQKAKHVVVVGGGSAGVEM 156
Query: 155 AGEIAVDFPDKKVILVHRGPKLLEF-VGSRASQIALDWLTSKKVEVILNQSVT-LNTISD 212
A E+ D+P+K+V LVH L + + + + + L SK V +IL Q VT L+ ++
Sbjct: 157 AAEVKTDYPEKEVTLVHSKVALADVQLQPKVRRTVKEILLSKGVRLILAQKVTNLDQVTS 216
Query: 213 GLIETSS-------GETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVR 265
+ + ++ E + D CTG ++SS D L G L+V++ L+V+
Sbjct: 217 NVAQENTVLQLDKNSEVVTCDLVLCCTGYKISSSSYSSA-FGDKLAEDGALIVNDYLQVQ 275
Query: 266 GFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIALVSL 325
G NV+A+GD I E K Y A HA V A N++ ++G+ ++ TYKPG L+S+
Sbjct: 276 GHANVYAVGDCAYINEPKMAYYAGIHARVAATNVRNSLIGK---SLKTYKPGALSMLLSM 332
Query: 326 GRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLG 362
GR +GV F + KSRD+FV K+ K++G
Sbjct: 333 GRNDGVGQFNGCYLGRFFVTMAKSRDIFVSKSWKEMG 369
>sp|Q9BRQ8|AIFM2_HUMAN Apoptosis-inducing factor 2 OS=Homo sapiens GN=AIFM2 PE=1 SV=1
Length = 373
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 172/340 (50%), Gaps = 21/340 (6%)
Query: 42 VLIDEKEYFEITWASLRAVVEPSFAVRSVINHG-DYLSNVKIVVSTAVSITDTEVVTAGG 100
+L+D K+ F A+LRA VE FA ++ I++ + N + + + + + V+ GG
Sbjct: 38 MLVDMKDSFHHNVAALRASVETGFAKKTFISYSVTFKDNFRQGLVVGIDLKNQMVLLQGG 97
Query: 101 QTFVYDYVVVATGHVESVPKSRTERLSQ------YEKDFEKVKSANSVLIVGGGPTGVEL 154
+ + ++++ATG P E SQ YE +V+ + +++VGGG GVE+
Sbjct: 98 EALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQVQRSRFIVVVGGGSAGVEM 157
Query: 155 AGEIAVDFPDKKVILVHRGPKLL--EFVGSRASQIALDWLTSKKVEVILNQSVT------ 206
A EI ++P+K+V L+H L E + S ++ + L K V+++L++ V+
Sbjct: 158 AAEIKTEYPEKEVTLIHSQVALADKELLPSVRQEVK-EILLRKGVQLLLSERVSNLEELP 216
Query: 207 LNTISDGL-IETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVR 265
LN + + ++T G + T+ +CTG + SS R+ + L G L V+E+L+V
Sbjct: 217 LNEYREYIKVQTDKGTEVATNLVILCTGIKINSSAYRKA-FESRLASSGALRVNEHLQVE 275
Query: 266 GFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIALVSL 325
G NV+AIGD D+ K YLA HA + N+ + R + YKPG L+S+
Sbjct: 276 GHSNVYAIGDCADVRTPKMAYLAGLHANIAVANIVNSVKQR---PLQAYKPGALTFLLSM 332
Query: 326 GRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLGLKP 365
GR +GV + + KSRDLFV + K + P
Sbjct: 333 GRNDGVGQISGFYVGRLMVRLTKSRDLFVSTSWKTMRQSP 372
>sp|A5PJM4|AIFM2_BOVIN Apoptosis-inducing factor 2 OS=Bos taurus GN=AIFM2 PE=2 SV=1
Length = 373
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 170/343 (49%), Gaps = 27/343 (7%)
Query: 42 VLIDEKEYFEITWASLRAVVEPSFAVRSVINHG-DYLSNVKIVVSTAVSITDTEVVTAGG 100
VL+D K+ F A+LRA VE FA ++ I++ + N + + + + + V+ G
Sbjct: 38 VLVDMKDSFHHNVAALRASVESGFAKKTFISYSVTFKENFRQGLVVEIDLKNQTVLLEDG 97
Query: 101 QTFVYDYVVVATGHVESVP------KSRTERLSQYEKDFEKVKSANSVLIVGGGPTGVEL 154
Q + ++++ATG P S+ + YE +V+ + S+++VGGG GVE+
Sbjct: 98 QALPFSHLILATGSTGLFPGKFNQVSSQQMAIQAYEDMVTQVQRSQSIVVVGGGSAGVEM 157
Query: 155 AGEIAVDFPDKKVILVHR-----GPKLLEFVGSRASQIALDWLTSKKVEVILNQSVT--- 206
A EI ++P+K+V L+H +LL V +I L K V+++L++ V+
Sbjct: 158 AAEIKTEYPEKEVTLIHSKMALADTELLPCVRQEVKEI----LLRKGVQLLLSERVSNLE 213
Query: 207 ---LNTISDGL-IETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL 262
+N + + ++T G +D + +C G + S+ R + D L G L V+E L
Sbjct: 214 ALPVNERRECIKVQTDKGTEVDANLVIVCNGIKINSAAYR-SAFGDRLASNGALRVNEYL 272
Query: 263 RVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIAL 322
+V G+ +++AIGD D+ E K Y A HA V N+ M R + TYKPG L
Sbjct: 273 QVEGYSHIYAIGDCADVREPKMAYHASLHANVAVANIVNSMKQR---PLKTYKPGSLTFL 329
Query: 323 VSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLGLKP 365
+++GR +GV + + KSRDL V + K + P
Sbjct: 330 LAMGRNDGVGQISGFYVGRLMVRLAKSRDLLVSTSWKTMKQSP 372
>sp|Q8BUE4|AIFM2_MOUSE Apoptosis-inducing factor 2 OS=Mus musculus GN=Aifm2 PE=2 SV=1
Length = 373
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 168/343 (48%), Gaps = 27/343 (7%)
Query: 42 VLIDEKEYFEITWASLRAVVEPSFAVRSVINH-GDYLSNVKIVVSTAVSITDTEVVTAGG 100
+L+D K+ F A+LRA VE FA ++ I++ + N + + + + V+ GG
Sbjct: 38 MLVDMKDSFHHNVAALRASVESGFAKKTFISYSATFKDNFRQGKVIGIDLKNRMVLLQGG 97
Query: 101 QTFVYDYVVVATGHVESVPKSRTERLSQ------YEKDFEKVKSANSVLIVGGGPTGVEL 154
+ + ++++ATG P E Q YE ++++ + +++VGGG GVE+
Sbjct: 98 EALPFSHLILATGSTGPFPGKFNEVSCQQAAIQAYEDMVKQIQRSQFIVVVGGGSAGVEM 157
Query: 155 AGEIAVDFPDKKVILVH-RGP----KLLEFVGSRASQIALDWLTSKKVEVILNQSVT--- 206
A EI ++P+K+V L+H R P +LL V +I L K V+++L++ V+
Sbjct: 158 AAEIKTEYPEKEVTLIHSRVPLADKELLPCVRQEVKEI----LLRKGVQLLLSERVSNLE 213
Query: 207 ---LNTISDGL-IETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL 262
N + + +ET G + T+ +C G + SS R + + L G L V+E L
Sbjct: 214 ELPRNEYREYIKVETDKGTEVATNMVIVCNGIKINSSAYR-SAFESRLASNGALKVNEFL 272
Query: 263 RVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIAL 322
+V G+ N++AIGD D E K Y A HA V N+ M R + YKPG L
Sbjct: 273 QVEGYSNIYAIGDCADTKEPKMAYHAGLHANVAVANIVNSMKQR---PLKAYKPGALTFL 329
Query: 323 VSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGKTRKQLGLKP 365
+S+GR +GV + + KSRDL + + K + P
Sbjct: 330 LSMGRNDGVGQISGFYVGRLMVRLAKSRDLLISTSWKTMRQSP 372
>sp|P52923|AIF1_YEAST Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1
Length = 378
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 141/313 (45%), Gaps = 46/313 (14%)
Query: 78 SNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLSQ-----YEKD 132
S ++++ TA S D EVV + +D +V+ATG + P T +E++
Sbjct: 71 SGIEVIKDTAASFDDKEVVLGSDRAIKFDILVLATGSKWADPIGSTYTFGDNYKEYFERE 130
Query: 133 FEKVKSANSVLIVGGGPTGVELAGEIAVDFPD------KKVILVHRGPKLLEFVGSRASQ 186
++ A+ +L +GGG ELAGE+ + + K++ ++H KLL G
Sbjct: 131 ASRISDADHILFLGGGFVNCELAGELLFKYLEEIRSGKKRISIIHNSDKLLPDSGLYNDT 190
Query: 187 I---ALDWLTSKKVEVILNQ-SVTLNTISDGL-IETSSGETIDTDCHFMCTGKAMASSWL 241
+ D+L+ + + LN +L+T + + S + ID D + G S +
Sbjct: 191 LRKNVTDYLSKNGITLYLNTVGASLDTSPKRIFLGEGSSKYIDADLIYRGVG---ISPNV 247
Query: 242 RETILKDSLDGRGRLMVDENLRVRGFK--NVFAIGDITDIPEIKQGYLAQKHALVTAKN- 298
+ D D +G + V++N RV+ + NVFAIGD+T+ + H LV N
Sbjct: 248 PVNSISDLCDKKGFIQVEKNFRVKAVEAGNVFAIGDVTNF---------RYHGLVKRDNW 298
Query: 299 ----LKKLMMGRNKGTMAT------YKPGYPIALVSLGRREGVAHFPF-LTISGRIPGWI 347
+ ++ +GT A+ + G+ + VSLG G FP L + IP ++
Sbjct: 299 VDVLTRNVISSLQEGTEASLVDADCLETGHAPSGVSLGPNAGFGQFPLPLLGTINIPSFL 358
Query: 348 ----KSRDLFVGK 356
KS++LF K
Sbjct: 359 ISRAKSKNLFSDK 371
>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
168) GN=yumB PE=3 SV=1
Length = 406
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 147/372 (39%), Gaps = 63/372 (16%)
Query: 14 VEKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITW-----ASLRAVVE 62
+ K K+V++G G GG + + + AD+ L+++ Y +E TW A
Sbjct: 3 LNKPKIVILGAGYGGLMTVTRLTKYVGPNDADITLVNKHNYHYETTWMHEASAGTLHHDR 62
Query: 63 PSFAVRSVINHGDYLSNVKIVVST--AVSITDTEVVTAGGQTFVYDYVVVATGHVES--- 117
+ ++ VIN S V V T A+ I + +VV A G+ YDY+V+ G V
Sbjct: 63 CRYQIKDVINQ----SRVNFVQDTVKAIKIDEKKVVLANGE-LQYDYLVIGLGAVPETFG 117
Query: 118 ----------VPKSRTERL---------SQYEKDFEKVKSANSVLIVGGGPTGVELAGEI 158
+ T RL + Y + EK ++++ G G TG+E GE+
Sbjct: 118 IKGLKEYAFPIANINTSRLLREHIELQFATYNTEAEKRPDRLTIVVGGAGFTGIEFLGEL 177
Query: 159 AVDFPDK-----------KVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTL 207
A P+ ++I V P +L A+ +L VE + +V
Sbjct: 178 AARVPELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHYLEENGVEFKIGTAVQE 237
Query: 208 NTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGF 267
T + E + + + E +++ RGR+ V+ +LR G
Sbjct: 238 CTPEGVRVGKKDEEPEQIKSQTVVWAAGVRGHPIVEEAGFENM--RGRVKVNPDLRAPGH 295
Query: 268 KNVFAIGDI-------TDIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPI 320
NVF +GD T+ P +A + + AKNL +L+ G G + +KP
Sbjct: 296 DNVFILGDSSLFMNEDTERPYPPTAQIAMQQGITVAKNLGRLIKG---GELEEFKPDIKG 352
Query: 321 ALVSLGRREGVA 332
+ SLG V
Sbjct: 353 TVASLGEHNAVG 364
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 30/360 (8%)
Query: 17 KKVVVIGGGVGG-----SLLAYHIQSFADVVLIDEKEY--FEITWASLRAVVEPSFAVRS 69
KK+V+IGGG G LL + + LID Y + + +L A +R
Sbjct: 2 KKLVLIGGGYGNMRVLHRLLPNQLPDDVSITLIDRNPYHCLKTEYYALAAGTISDHHIRV 61
Query: 70 VINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATG------HVESVPK--S 121
L +V+ T++ I +V+ + YD ++ G +V P+
Sbjct: 62 SFPEHPRL-DVQYGDITSIDIVQKQVLFQDREPISYDDAIIGLGCEDKYHNVPGAPEFTY 120
Query: 122 RTERLSQYEKDFEKVK--SANS-VLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE 178
+ + Q + ++K+ SAN+ V IVG G +GVELA E+ D +IL RG +L
Sbjct: 121 SIQTIDQSRETYQKLNNLSANATVAIVGAGLSGVELASELRESRDDLNIILFDRGNLILS 180
Query: 179 FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238
R S+ W V +I ++T + +G++ + + I D + T +
Sbjct: 181 SFPERLSKYVQKWFEEHGVRIINRANIT--KVEEGVV-YNHDDPISADA-IVWTAGIQPN 236
Query: 239 SWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKN 298
+R+ L D +GR+++ + + G ++++ +GD +P LA+ A +
Sbjct: 237 KVVRD--LDVEKDAQGRIVLTPHHNLPGDEHLYVVGDCASLPHAPSAQLAEAQAEQIVQI 294
Query: 299 LKKLMMGRNKGTMATYKPGYPI--ALVSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGK 356
L+K G + P + + L SLG++ G + GR+P +KS L++ K
Sbjct: 295 LQKRWNGE---ALPESMPQFKLKGVLGSLGKKAGFGLVADRPLIGRVPRMLKSGLLWMYK 351
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKTISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFGKPIAGKKAAFMK 379
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFDKPIAGKKAAFMK 379
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 162/393 (41%), Gaps = 76/393 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-----ADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHE--------ASA 55
Query: 69 SVINHGDYLSNVKIV--------VSTAVSITDTEVVTAGGQTFVYDY--VVVATG----- 113
+N+ D L V+ V V V+ D + +YD+ +VVA G
Sbjct: 56 GTLNYEDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSRT------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V +R ++ + Y EK + S+L+ G G TGVE G
Sbjct: 116 FGIEGMKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSV 205
E+ VD K+ V PK+L A+ +L + VE + +
Sbjct: 176 ELTDRIPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPI 235
Query: 206 TLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENL 262
++E +D + + G ++ ++ +R ++++S +G RGR++ ++L
Sbjct: 236 VACNEKGFVVE------VDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDL 289
Query: 263 RVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYK 315
+ G+ N+F IGD + + P +A + AKN+K+++ G +
Sbjct: 290 TINGYDNIFVIGDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVD 349
Query: 316 PGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 350 RG---TVCSLGSHDGVGMVFDKPIAGKKAAFMK 379
>sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1834 PE=3 SV=1
Length = 402
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 162/387 (41%), Gaps = 64/387 (16%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQ-----SFADVVLIDEKEY-FEITW-----ASLRAVVEP 63
++KKV+V+G G G +Q A+V LI++ +Y +E TW A + +
Sbjct: 4 DRKKVLVLGAGYAGLQTITKLQKQISADEAEVTLINKNDYHYEATWLHEASAGTISYEDL 63
Query: 64 SFAVRSVINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATG---------- 113
+ V SV+N D ++ VK V T + +V T G F +D +VV+ G
Sbjct: 64 LYPVESVVNK-DKVNFVKAEV-TKIDRNAKKVETDAG-IFDFDILVVSLGFESETFGIKG 120
Query: 114 ------HVESVPKSR------TERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVD 161
+E+V +R ++ + Y +K ++++ G G TGVE GE+
Sbjct: 121 MKDYAFQIENVLTARKLSRHIEDKFANYASSKQKDDKDLAIIVGGAGFTGVEFLGELTDR 180
Query: 162 FPDK-----------KVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNTI 210
P+ K+ V PK+L A+++L +K VE + +
Sbjct: 181 IPELCNKYGVEQSKVKITCVEAAPKMLPMFSDELVNHAVNYLENKGVEFKIGTPIVAAN- 239
Query: 211 SDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDG--RGRLMVDENLRVRGFK 268
G + + E + + + + S L E +S +G RGR++ ++L + G+
Sbjct: 240 EKGFVVKVNDEEQQLEANTVVWAAGVRGSKLME----ESFEGVKRGRIVTKQDLTIEGYD 295
Query: 269 NVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIA 321
++F IGD + + P +A + TAKN+K ++ G+ G
Sbjct: 296 DIFVIGDCSAFIPAGEERPLPTTAQIATQQGEHTAKNVKNILEGQPTNEFEYVDRG---T 352
Query: 322 LVSLGRREGVAHFPFLTISGRIPGWIK 348
+ SLG +GV I G+ ++K
Sbjct: 353 VCSLGAHDGVGVVYGRDIQGKKAAFMK 379
>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
Length = 402
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 163/394 (41%), Gaps = 78/394 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQ-----SFADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHE--------ASA 55
Query: 69 SVINHGDYL---------SNVKIVVSTAVSIT-DTEVVTAGGQTFVYDYVVVATG----- 113
IN+ D L + V VV+ I + + V + +D +VVA G
Sbjct: 56 GTINYEDLLYPVEKTVNKNKVNFVVAEVTKIDRNAKRVETDKGVYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSR------TERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V SR ++ + Y EK S+L+ G G TG+E G
Sbjct: 116 FGIDGMKEHAFQIENVLTSRKLSRHIEDKFANYAASKEKDDKDLSILVGGAGFTGIEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEV-ILNQS 204
E+ VD K+ V PK+L A+ +L + VE I
Sbjct: 176 ELTDRIPELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKYLEDRGVEFKIATPI 235
Query: 205 VTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRET-ILKDSLDG--RGRLMVDEN 261
V N G + +GE + G ++ ++ +R + ++++S +G RGR++ ++
Sbjct: 236 VACN--EKGFVVEVNGEKQQLEA-----GTSVWTAGVRGSHLMEESFEGVKRGRIINKQD 288
Query: 262 LRVRGFKNVFAIGDITD-IPEIKQ------GYLAQKHALVTAKNLKKLMMGRNKGTMATY 314
L + G ++F IGD + IP ++ +A + TA N+K+L+ G +
Sbjct: 289 LTIEGHNDIFVIGDCSAFIPADEERPLPTTAQIAMQQGEHTASNIKRLLNGESTQDFQYV 348
Query: 315 KPGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 349 NRG---TVCSLGANDGVGIVYGRDIAGKKAAFLK 379
>sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3
SV=1
Length = 402
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 160/394 (40%), Gaps = 78/394 (19%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQ-----SFADVVLIDEKEY-FEITWASLRAVVEPSFAVR 68
++KKV+V+G G G +Q A++ LI++ EY +E TW A
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHE--------ASA 55
Query: 69 SVINHGDYL---------SNVKIVVSTAVSIT-DTEVVTAGGQTFVYDYVVVATG----- 113
IN+ D L V VV+ I + + V + +D +VVA G
Sbjct: 56 GTINYEDLLYPVEKTVNKDKVNFVVAEVTKIDRNAKRVETDKGVYDFDILVVALGFVSET 115
Query: 114 -----------HVESVPKSR------TERLSQYEKDFEKVKSANSVLIVGGGPTGVELAG 156
+E+V SR ++ + Y EK S+L+ G G TG+E G
Sbjct: 116 FGIDGMKEHAFQIENVLTSRKLSRHIEDKFANYAASKEKDDKDLSILVGGAGFTGIEFLG 175
Query: 157 EI-----------AVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEV-ILNQS 204
E+ VD K+ V PK+L A+ +L + VE I
Sbjct: 176 ELTDRIPELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKYLEDRGVEFKIATPI 235
Query: 205 VTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRET-ILKDSLDG--RGRLMVDEN 261
V N G + +GE + G ++ ++ +R + ++++S +G RGR++ ++
Sbjct: 236 VACN--EKGFVVEVNGEKQQLEA-----GTSVWTAGVRGSHLMEESFEGVKRGRVINKQD 288
Query: 262 LRVRGFKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATY 314
L + G ++F IGD + + P +A + TA N+K+L+ G +
Sbjct: 289 LTIEGHNDIFVIGDCSAFIPAGEERPLPTTAQIAMQQGEHTASNIKRLLNGESTQDFQYV 348
Query: 315 KPGYPIALVSLGRREGVAHFPFLTISGRIPGWIK 348
G + SLG +GV I+G+ ++K
Sbjct: 349 NRG---TVCSLGANDGVGIVYGRDIAGKKAAFLK 379
>sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1
Length = 402
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 160/389 (41%), Gaps = 68/389 (17%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQ-----SFADVVLIDEKEY-FEITW-----ASLRAVVEP 63
++KKV+V+G G G +Q AD+ LI++ +Y +E TW A +
Sbjct: 4 DRKKVLVLGAGYAGLQTVTKLQKELSADEADITLINKNKYHYEATWLHEASAGTLNYEDL 63
Query: 64 SFAVRSVINHGDYLSNVKIVVSTAVSIT-DTEVVTAGGQTFVYDYVVVATG--------- 113
+ + SVI VK + + I + + V + YD +VVA G
Sbjct: 64 IYPIESVIKE----DKVKFINAEVTKIDRNAKKVETNHGIYDYDILVVALGFESETFGIN 119
Query: 114 -------HVESVPKSR------TERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAV 160
+E++ +R ++ + Y EK ++L+ G G TG+E GE+
Sbjct: 120 GMKDYAFQIENIETARKLSRHIEDKFANYAASKEKDDKDLAILVGGAGFTGIEFLGELTE 179
Query: 161 DFPDK-----------KVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNT 209
P+ +V V PK+L A+++L + VE + +
Sbjct: 180 RIPELCNKYGVDQNKVRVTCVEAAPKMLPMFSDELVNYAVNYLEDRGVEFKIATPIVACN 239
Query: 210 ISDGLIETSSGETIDTDCHFMCTGKAMASSWLR-ETILKDSLDG--RGRLMVDENLRVRG 266
+++ + E + G A+ ++ +R ++++S +G RGR++ ++L + G
Sbjct: 240 EKGFVVKINDQE------QQLEAGTAIWAAGVRGSKLMEESFEGVKRGRIVTKQDLTIEG 293
Query: 267 FKNVFAIGDIT-------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYP 319
++F IGD++ + P +A + AK++K ++ G+ G
Sbjct: 294 HDDIFVIGDVSAFIPAGEERPLPTTAQIAMQQGEHVAKSIKNILNGQAATDFEYVDRG-- 351
Query: 320 IALVSLGRREGVAHFPFLTISGRIPGWIK 348
+ SLG +GV I+G+ ++K
Sbjct: 352 -TVCSLGAHDGVGIVYGRDITGKKAAFMK 379
>sp|P39051|TYTR_TRYBB Trypanothione reductase OS=Trypanosoma brucei brucei GN=TPR PE=1
SV=1
Length = 492
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 106 DYVVVATGHVESVPK-SRTERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEI-AVDFP 163
D++++ATG +P E + F + VL VGGG VE AG A P
Sbjct: 154 DHILLATGSWPQMPAIPGVEHCISSNEAFYLPEPPRRVLTVGGGFISVEFAGIFNAYKPP 213
Query: 164 DKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQS---VTLNTISDGLIETSSG 220
KV L +R +L + LT+ +E++ N++ V+LNT + SG
Sbjct: 214 GGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESG 273
Query: 221 ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITD 278
+T+D D M G+ ++ L+ + L +G + VDE R N++AIGDITD
Sbjct: 274 KTLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKGGVQVDEFSRTN-VPNIYAIGDITD 330
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 137/332 (41%), Gaps = 77/332 (23%)
Query: 15 EKKKVVVIGGGVGGSLLAYHIQSF-------ADVVLIDEKEYF---EITWASLRAVVE-- 62
++ +V ++GGG GG A ++S VVL+D+ E F + + L V+
Sbjct: 79 KRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYELLSGEVDVW 138
Query: 63 ---PSFAVRSVINHGDYLSNVKI-----------------VVSTAVSITDTEVVTAGGQT 102
P F+ D L+N I V + +S+T V+ G
Sbjct: 139 EIAPRFS--------DLLTNTGIQFLRDRVKTLLPCDHLGVNGSEISVTGGTVLLESGFK 190
Query: 103 FVYDYVVVATG---HVESVPKSR---------------TERLSQYEKDFEKVKSANSVLI 144
YD++V+A G ++ VP + E+LS+ E+ K SA V +
Sbjct: 191 IEYDWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKLSKLERKNFKDGSAIKVAV 250
Query: 145 VGGGPTGVELAGEIAVDFPDKKVIL-VHRGPKLLEFVGSRASQIALDWLTSKKVEVILN- 202
VG G GVELA I+ D+ ++ ++ +L + A+ LTS+KV+++L
Sbjct: 251 VGCGYAGVELAATISERLQDRGIVQSINVSKNILTSAPDGNREAAMKVLTSRKVQLLLGY 310
Query: 203 --QSV----TLNTISDGLIETSSGE------TIDTDCHFMCTGKAMASSWLRET---ILK 247
QS+ L +E E I+ D G + L + +L
Sbjct: 311 LVQSIKRASNLEEDEGYFLELQPAERGLESQIIEADIVLWTVGAKPLLTKLEPSGPNVLP 370
Query: 248 DSLDGRGRLMVDENLRVRGFKNVFAIGDITDI 279
L+ RG+ DE LRV+G +FA+GD + +
Sbjct: 371 --LNARGQAETDETLRVKGHPRIFALGDSSSL 400
>sp|B5FG80|NORW_VIBFM Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio fischeri
(strain MJ11) GN=norW PE=3 SV=1
Length = 381
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 27/249 (10%)
Query: 92 DTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE---------RLSQYEKDFEKVKSANSV 142
+ + +TA G+ + YD +V+ATG VP + L ++ +K+ A ++
Sbjct: 87 EQQTITANGEQYTYDKLVLATGSHTFVPPFHGDGCEDILTLNSLKEFSAIQQKILDAKNI 146
Query: 143 LIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKK-VEVIL 201
L++GGG G ELA ++A K V LV LL + + L+ +K V V L
Sbjct: 147 LVIGGGLIGTELAMDLA--NAGKMVTLVEPNSHLLANMMPDFISLPLENACKEKGVTVNL 204
Query: 202 NQSV-TLNTISDGL-IETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVD 259
+ V +N G + TS+ + DC G + E L + RG ++VD
Sbjct: 205 SDCVQAVNKQEQGYRVTTSNCHSYYVDCVISAAGLKPNTQLATEANL---MVNRG-IVVD 260
Query: 260 ENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKLMMGRN-----KGTMATY 314
NL+ N++A+GD +I YL + L++A L K ++G + M
Sbjct: 261 SNLQTSA-NNIYALGDCAEIEGKVMAYL--QPILLSANALAKTLLGTDTALALPNMMVKV 317
Query: 315 K-PGYPIAL 322
K P YP+ L
Sbjct: 318 KTPNYPVQL 326
>sp|Q5E3X0|NORW_VIBF1 Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=norW PE=3 SV=2
Length = 381
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 120/271 (44%), Gaps = 31/271 (11%)
Query: 74 GDYLSNVKIVVS--TAVSITDTEV--VTAGGQTFVYDYVVVATGHVESVPKSRTE----- 124
GD+ +++ T V DTE+ +TA G+ + Y +V+ATG +P +
Sbjct: 65 GDFAEQYNVILHRHTWVESIDTEIQAITANGEQYAYGKLVLATGSQTFIPPFHGDGCGDI 124
Query: 125 ----RLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEFV 180
L ++ +KV + VL+VGGG G ELA ++A K V LV LL +
Sbjct: 125 LTLNSLKEFAGIQQKVLESKKVLVVGGGLIGTELAMDLA--NAGKMVTLVEPNTHLLANM 182
Query: 181 GSRASQIALDWLTSKK-VEVILNQSV-TLNTISDGL-IETSSGETIDTDCHFMCTGKAMA 237
+ L+ +K + V L+ V +N G + TS+G + DC G
Sbjct: 183 VPDFISLPLEKACKEKGITVNLSDCVQAVNKQEQGYRVTTSNGHSYYVDCVISAAGLKPN 242
Query: 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAK 297
+ E L + RG ++VD NL+ N++A+GD +I YL + L++A
Sbjct: 243 TKLATEANL---MVNRG-IVVDLNLQTSA-NNIYALGDCAEIEGKVMAYL--QPILLSAN 295
Query: 298 NLKKLMMGRN-----KGTMATYK-PGYPIAL 322
L K ++G + M K P YPI L
Sbjct: 296 ALAKTLLGTDTALSMPNMMVKVKTPNYPIQL 326
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 163/402 (40%), Gaps = 71/402 (17%)
Query: 13 LVEKKKVVVIGGGVGGSLLAYHIQSFA-DVVLIDEKEYFEIT---------WASLRAVVE 62
++E +K++++G G G ++ S D+ +I + +F T R++ E
Sbjct: 36 VIENEKLIILGCGWGSYSFLKNLNSIKYDITVISPRNHFLFTPLLTSSAVGTLEFRSIAE 95
Query: 63 PSFAVRSVINHGDYL----------SNVKIVVSTAVSITDTEV--------VTAGGQTFV 104
P R IN Y+ +N +V ST + E+ V + TF
Sbjct: 96 PVRTTRD-INEFKYIQASVTSINPENNSVLVKSTFHNEKPFEMKYDKLVIGVGSRNNTFG 154
Query: 105 YDYVVVATGHVESVPKSRT---------ERLSQYEKDFEKVKSANSVLIVGGGPTGVELA 155
V ++ + +R ER S + E+ + S +IVGGG TG+E
Sbjct: 155 IKGVEENANFLKELHHAREIRQKIIECFERASLPDVSTEERERLLSFVIVGGGATGIEFT 214
Query: 156 GEIAVDFPDK-------------KVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILN 202
E+ F + K+IL+ K+L + + AL + ++V +
Sbjct: 215 SELNDFFSEDLSRLFPFVPVNEVKIILLEASGKILSTFDQKLVKKALINFRNSGIDVRTH 274
Query: 203 QSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENL 262
SV + D +I +G+ I TG + KDS D R++VD++L
Sbjct: 275 SSVK-EVLKDYVI-LDNGDRIPYGLLVWSTGIGQHPLVKNSSFEKDSHD---RIIVDDHL 329
Query: 263 RVRGFKNVFAIGDITDI-----PEIKQGYLAQKHALVTAK---NLKKLMMGRNKGTMATY 314
RV+ + NVF+ GD ++ P Q +A + A+ AK NL+KL N +
Sbjct: 330 RVKNYSNVFSFGDCANVENKNYPPTAQ--VASQSAVYLAKEFNNLEKL----NPNPPKPF 383
Query: 315 KPGYPIALVSLGRREGVAHFPFLTISGRIPGWIKSRDLFVGK 356
+ L G++ G+ F +SG I G+I R ++ +
Sbjct: 384 AFKFLGLLAYTGKKSGILQTDFFDLSGFI-GFITWRSAYLTR 424
>sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3A11.07 PE=3 SV=1
Length = 551
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 140/352 (39%), Gaps = 72/352 (20%)
Query: 16 KKKVVVIGGGVGGSLLAYHIQ-SFADVVLIDEKEYFEITW---------ASLRAVVEPSF 65
KK +VV+G G G + + I S +V+++ + YF T R++V+P
Sbjct: 91 KKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQP-- 148
Query: 66 AVRSVINHGDYLSNVKIVVSTAVSI-TDTEVV-----TAGG----QTFVYDYVVVATG-- 113
+R ++ H VK + + D +V+ T G Q YDY+V + G
Sbjct: 149 -IRYMLRHKS--CYVKFYEAECTDVDADKKVIHIKKTTTDGVDLEQEIKYDYLVCSHGAE 205
Query: 114 -HVESVP----------------KSRTERLSQYE----KDF--EKVKSANSVLIVGGGPT 150
++P K R L E KD E + ++VGGGPT
Sbjct: 206 TQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHTVVVGGGPT 265
Query: 151 GVELAGEIAVDF-------------PDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKV 197
G+E AGE+A DF D V LV P +L ++ S +
Sbjct: 266 GMEFAGEMA-DFIEDDLKSWYPELADDFAVTLVEALPSVLPMFSAKLRDYTQSLFDSSHI 324
Query: 198 EVILNQSVTLNTISDGLIET-----SSGETIDTDCHFMCTGKAMASSWLRETILKDSLDG 252
++ N ++ T + +E S E + + G A L + +++ S +
Sbjct: 325 KIRTNTALKKVTAENIHVEVKNPDGSKQEEVIPYGLLVWAGGNRARP-LTKKLMEGSEEQ 383
Query: 253 RGR--LMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKKL 302
R L+VDE L+++G+K++FA+GD T +A + + KL
Sbjct: 384 NNRRGLVVDEYLKLKGYKDIFALGDCTHTAYAPTAQVASQQGAYLGQLFNKL 435
>sp|Q8D4F7|NORW_VIBVU Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus
(strain CMCP6) GN=norW PE=3 SV=1
Length = 382
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 41/270 (15%)
Query: 79 NVKIVVSTAVS--ITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE---------RLS 127
NV++ T V +T + V A G+ + Y +V ATG VP R + L
Sbjct: 72 NVQLHAHTQVERVLTQQQQVVANGRCYPYSKLVFATGAQAFVPPMRGDGLAKVMTLNSLQ 131
Query: 128 QYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL-----EFVGS 182
+Y+ + + A VL++GGG GVE+A ++A K+V +V +LL EF+
Sbjct: 132 EYQAAEQPLSRAQHVLVIGGGLIGVEIALDLATS--GKQVTVVEPNARLLANLLPEFIAL 189
Query: 183 RASQI----ALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMAS 238
Q + + +VE + Q TL I G D G +
Sbjct: 190 PLEQQLMKHGIQLALNSRVESVTEQGQTLA------IALHDGREFAVDAVLCAAGLKANT 243
Query: 239 SWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKN 298
+ RE L RG + VD L +++A+GD I YL + +++A
Sbjct: 244 AVAREAGLSVE---RG-ICVDHQLNTSD-PHIYALGDCAQIEGRMLPYL--QPIVLSANV 296
Query: 299 LKKLMMGRN-----KGTMATYK-PGYPIAL 322
L K ++G+ M K P YPI L
Sbjct: 297 LAKQLVGQEARLTLPPMMVKVKTPSYPIQL 326
>sp|P13110|TYTR_TRYCO Trypanothione reductase OS=Trypanosoma congolense GN=TPR PE=1 SV=1
Length = 492
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 106 DYVVVATGHVESVPK-SRTERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFP- 163
+++++ATG + K E + F + VL VGGG VE AG P
Sbjct: 154 EHIIIATGSWPQMLKIPGIEHCISSNEAFYLEEPPRRVLTVGGGFISVEFAGIFNAYKPV 213
Query: 164 DKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQS---VTLNTISDGLIETSSG 220
KV L +R +L Q L + ++++ N++ + LN + SG
Sbjct: 214 GGKVTLCYRNNPILRGFDYTLRQELTKQLVANGIDIMTNENPSKIELNPDGSKHVTFESG 273
Query: 221 ETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDIT 277
+T+D D M G+ + +L+ + +L +G + VDE R N++AIGD+T
Sbjct: 274 KTLDVDVVMMAIGRLPRTGYLQLQTVGVNLTDKGAIQVDEFSRTN-VPNIYAIGDVT 329
>sp|P66006|STHA_MYCTU Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium tuberculosis GN=sthA PE=3 SV=1
Length = 468
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 70 VINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLSQY 129
++ HG ++ I+V T V DY+++ATG +R R S
Sbjct: 111 IVGHGRFIDPHTILVEDQARREKTTVTG--------DYIIIATG-------TRPARPSGV 155
Query: 130 EKDFEKVKSANSVL----------IVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179
E D E+V ++ +L +VG G G+E A A KV +V + +L+F
Sbjct: 156 EFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAA--LGTKVTVVEKRDNMLDF 213
Query: 180 VGSRASQIALDWLTSKKVEVILNQSVT-LNTISDGLIET-SSGETIDTDCHFMCTGKAMA 237
+ L V + VT ++ S G + T +SG+ I + G+
Sbjct: 214 CDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQ 273
Query: 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-----EIKQGYLAQKHA 292
+ L + GRGR+ VD+ + + +++A+GD+ P ++QG LA HA
Sbjct: 274 TDHLDLHNAGLEVQGRGRIFVDDRFQTK-VDHIYAVGDVIGFPALAATSMEQGRLAAYHA 332
Query: 293 L 293
Sbjct: 333 F 333
>sp|A5U665|STHA_MYCTA Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=sthA PE=3
SV=1
Length = 468
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 70 VINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLSQY 129
++ HG ++ I+V T V DY+++ATG +R R S
Sbjct: 111 IVGHGRFIDPHTILVEDQARREKTTVTG--------DYIIIATG-------TRPARPSGV 155
Query: 130 EKDFEKVKSANSVL----------IVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179
E D E+V ++ +L +VG G G+E A A KV +V + +L+F
Sbjct: 156 EFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAA--LGTKVTVVEKRDNMLDF 213
Query: 180 VGSRASQIALDWLTSKKVEVILNQSVT-LNTISDGLIET-SSGETIDTDCHFMCTGKAMA 237
+ L V + VT ++ S G + T +SG+ I + G+
Sbjct: 214 CDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQ 273
Query: 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-----EIKQGYLAQKHA 292
+ L + GRGR+ VD+ + + +++A+GD+ P ++QG LA HA
Sbjct: 274 TDHLDLHNAGLEVQGRGRIFVDDRFQTK-VDHIYAVGDVIGFPALAATSMEQGRLAAYHA 332
Query: 293 L 293
Sbjct: 333 F 333
>sp|C1AFH2|STHA_MYCBT Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=sthA
PE=3 SV=1
Length = 468
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 70 VINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLSQY 129
++ HG ++ I+V T V DY+++ATG +R R S
Sbjct: 111 IVGHGRFIDPHTILVEDQARREKTTVTG--------DYIIIATG-------TRPARPSGV 155
Query: 130 EKDFEKVKSANSVL----------IVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179
E D E+V ++ +L +VG G G+E A A KV +V + +L+F
Sbjct: 156 EFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAA--LGTKVTVVEKRDNMLDF 213
Query: 180 VGSRASQIALDWLTSKKVEVILNQSVT-LNTISDGLIET-SSGETIDTDCHFMCTGKAMA 237
+ L V + VT ++ S G + T +SG+ I + G+
Sbjct: 214 CDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQ 273
Query: 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-----EIKQGYLAQKHA 292
+ L + GRGR+ VD+ + + +++A+GD+ P ++QG LA HA
Sbjct: 274 TDHLDLHNAGLEVQGRGRIFVDDRFQTK-VDHIYAVGDVIGFPALAATSMEQGRLAAYHA 332
Query: 293 L 293
Sbjct: 333 F 333
>sp|A1KM51|STHA_MYCBP Soluble pyridine nucleotide transhydrogenase OS=Mycobacterium bovis
(strain BCG / Pasteur 1173P2) GN=sthA PE=3 SV=1
Length = 468
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 70 VINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLSQY 129
++ HG ++ I+V T V DY+++ATG +R R S
Sbjct: 111 IVGHGRFIDPHTILVEDQARREKTTVTG--------DYIIIATG-------TRPARPSGV 155
Query: 130 EKDFEKVKSANSVL----------IVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179
E D E+V ++ +L +VG G G+E A A KV +V + +L+F
Sbjct: 156 EFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAA--LGTKVTVVEKRDNMLDF 213
Query: 180 VGSRASQIALDWLTSKKVEVILNQSVT-LNTISDGLIET-SSGETIDTDCHFMCTGKAMA 237
+ L V + VT ++ S G + T +SG+ I + G+
Sbjct: 214 CDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQ 273
Query: 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-----EIKQGYLAQKHA 292
+ L + GRGR+ VD+ + + +++A+GD+ P ++QG LA HA
Sbjct: 274 TDHLDLHNAGLEVQGRGRIFVDDRFQTK-VDHIYAVGDVIGFPALAATSMEQGRLAAYHA 332
Query: 293 L 293
Sbjct: 333 F 333
>sp|P66007|STHA_MYCBO Probable soluble pyridine nucleotide transhydrogenase
OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
GN=sthA PE=3 SV=1
Length = 468
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 35/241 (14%)
Query: 70 VINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTERLSQY 129
++ HG ++ I+V T V DY+++ATG +R R S
Sbjct: 111 IVGHGRFIDPHTILVEDQARREKTTVTG--------DYIIIATG-------TRPARPSGV 155
Query: 130 EKDFEKVKSANSVL----------IVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179
E D E+V ++ +L +VG G G+E A A KV +V + +L+F
Sbjct: 156 EFDEERVLDSDGILDLKSLPSSMVVVGAGVIGIEYASMFAA--LGTKVTVVEKRDNMLDF 213
Query: 180 VGSRASQIALDWLTSKKVEVILNQSVT-LNTISDGLIET-SSGETIDTDCHFMCTGKAMA 237
+ L V + VT ++ S G + T +SG+ I + G+
Sbjct: 214 CDPEVVEALKFHLRDLAVTFRFGEEVTAVDVGSAGTVTTLASGKQIPAETVMYSAGRQGQ 273
Query: 238 SSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP-----EIKQGYLAQKHA 292
+ L + GRGR+ VD+ + + +++A+GD+ P ++QG LA HA
Sbjct: 274 TDHLDLHNAGLEVQGRGRIFVDDRFQTK-VDHIYAVGDVIGFPALAATSMEQGRLAAYHA 332
Query: 293 L 293
Sbjct: 333 F 333
>sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain
168) GN=yjlD PE=1 SV=3
Length = 392
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 158/369 (42%), Gaps = 69/369 (18%)
Query: 17 KKVVVIGGGVGGSLLA-----YHIQSFADVVLIDEKEYFEITW---------ASLRAVVE 62
K +V++G G GG L A ++ + A V ++++ +I S +AV
Sbjct: 3 KHIVILGAGYGGVLSALTVRKHYTKEQARVTVVNKYPTHQIITELHRLAAGNVSEKAVAM 62
Query: 63 PSFAVRSVINHGDYLSNVKIVVSTAVSITDTEVVTAGGQTFVYDYVVVATGHVES---VP 119
P + + D ++KI ++ S+ EV A G T YD +VV G V + +P
Sbjct: 63 P---LEKLFKGKDI--DLKIAEVSSFSVDKKEVALADGSTLTYDALVVGLGSVTAYFGIP 117
Query: 120 -------------------KSRTERLSQYEKDFEKVKSANSVLIVGGGPTGVELAGEIA- 159
+ +R+ +Y K K ++ ++LI GGG TGVEL GE+A
Sbjct: 118 GLEENSMVLKSAADANKVFQHVEDRVREYSK--TKNEADATILIGGGGLTGVELVGELAD 175
Query: 160 ----------VDFPDKKVILVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQSVTLNT 209
VD + K+ LV GPK+L + + A L + VE + VT
Sbjct: 176 IMPNLAKKYGVDHKEIKLKLVEAGPKILPVLPDDLIERATASLEKRGVEFLTGLPVT--N 233
Query: 210 ISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDENLRVRGFKN 269
+ +I+ G + + F+ TG + + E+ L+ + RGR V++ L+ ++
Sbjct: 234 VEGNVIDLKDGSKVVANT-FVWTGGVQGNPLVGESGLEVN---RGRATVNDFLQSTSHED 289
Query: 270 VFAIGDIT------DIPEIKQGYLAQKHALVTAKNLKKLMMGRNKGTMATYKPGYPIALV 323
VF GD P +A + + NL + G+ T+ T+KP L
Sbjct: 290 VFVAGDSAVYFGPDGRPYPPTAQIAWQMGELIGYNLFAYLEGK---TLETFKPVNSGTLA 346
Query: 324 SLGRREGVA 332
SLGR++ VA
Sbjct: 347 SLGRKDAVA 355
>sp|Q7MFY7|NORW_VIBVY Nitric oxide reductase FlRd-NAD(+) reductase OS=Vibrio vulnificus
(strain YJ016) GN=norW PE=3 SV=1
Length = 382
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 37/268 (13%)
Query: 79 NVKIVVSTAVS--ITDTEVVTAGGQTFVYDYVVVATGHVESVPKSRTE---------RLS 127
NV++ T V +T + V A G+ + Y +V ATG VP R + L
Sbjct: 72 NVQLHAHTQVERVLTQQQQVVANGRCYPYSKLVFATGAQAFVPPMRGDGLAKVMTLNSLQ 131
Query: 128 QYEKDFEKVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL-----EFVGS 182
+Y+ + + A VL++GGG GVE+A ++A K+V +V +LL EF+
Sbjct: 132 EYQAAEQPLSRAQHVLVIGGGLIGVEIALDLATS--GKQVTVVEPNARLLANLLPEFIAL 189
Query: 183 RASQIALDWLTSKKVEVILNQSVTLNTISDG--LIETSSGETIDTDCHFMCTGKAMASSW 240
Q L +++ LN V T+ I G D G ++
Sbjct: 190 PLEQ----QLMKHGIQLALNSRVESVTVQGQTLAIALHDGREFAVDAVLCAAGLKANTAV 245
Query: 241 LRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLK 300
RE L RG + VD L +++A+GD I YL + +++A L
Sbjct: 246 AREAGLSVE---RG-ICVDLQLNTSD-PHIYALGDCAQIEGRMLPYL--QPIVLSANVLA 298
Query: 301 KLMMGRN-----KGTMATYK-PGYPIAL 322
K ++G+ M K P YPI L
Sbjct: 299 KQLVGQEARLTLPPMMVKVKTPSYPIQL 326
>sp|A8GG95|NORW_SERP5 Nitric oxide reductase FlRd-NAD(+) reductase OS=Serratia
proteamaculans (strain 568) GN=norW PE=3 SV=1
Length = 379
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 111/247 (44%), Gaps = 33/247 (13%)
Query: 74 GDYLSNVKIVVSTAVSIT--DTE--VVTAGGQTFVYDYVVVATGHVESVPKSRTERL--- 126
GD+ ++ V IT DT+ +V +G Q + YD +V+A G VP+ L
Sbjct: 65 GDFAEQFQLTVHPHTRITAIDTQQKMVRSGEQVWHYDKLVLAIGAAAMVPQVPGHELMLT 124
Query: 127 --SQYE-KDFE-KVKSANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLE-FVG 181
SQ E +D + + A VLI+GGG G ELA ++ K+V LV R LL +
Sbjct: 125 LNSQQEFRDSQLTLLQAQRVLILGGGLIGCELAMDMC--RAGKQVTLVDRSGSLLSGLMP 182
Query: 182 SRASQIALDWLTSKKVEVILNQSVTLNTISDGLIET--SSGETIDTDCHFMCTGKAMASS 239
AS L VE++LNQ + T D I+ S+G + D A+AS
Sbjct: 183 VEASCRLQHALQQMGVELLLNQQLGALTQHDEGIQATLSNGRQLWVDA-------AIASV 235
Query: 240 WLRETILKDSLDGRGRLMVDENLRVRGFK-----NVFAIGDITDIPEIKQGYLA--QKHA 292
LR + L + L ++ ++V +V+A+GD +I +L Q A
Sbjct: 236 GLRPNV---GLARQAGLQINRGIQVNNRLQTSQVDVYALGDCAEIEGQLLPFLQPIQFSA 292
Query: 293 LVTAKNL 299
+ AKNL
Sbjct: 293 MTLAKNL 299
>sp|O07220|Y1812_MYCTU NADH dehydrogenase-like protein Rv1812c/MT1860 OS=Mycobacterium
tuberculosis GN=Rv1812c PE=2 SV=1
Length = 400
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 114/269 (42%), Gaps = 44/269 (16%)
Query: 40 DVVLIDEKEYFEITWASLRAVVEPSFAVRSVINHGDYLSNVKIV-VSTAVSITDTE---V 95
DV+++ K + +I + A + A R I GD L + V+ V+ D + V
Sbjct: 35 DVMVVSNKPFHDIRVRNYEADLS---ACR--IPLGDVLGPAGVAHVTAEVTAIDADGRRV 89
Query: 96 VTAGGQTFVYDYVVVATGHVESVPKSRTERLSQYEKDFE----KVKSANSVLIVGGGP-- 149
T+ G ++ YD +V+A+G V K L+++ D + V+ + + GGP
Sbjct: 90 TTSTGASYSYDRLVLASG--SHVVKPALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLT 147
Query: 150 -------------TGVELAGEIAV---------DFPDKKVILVHRGPKLLEFVGSRASQI 187
TG+E A E+ D +V+L+ P + +G A +
Sbjct: 148 SAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSDMGLSARPV 207
Query: 188 ALDWLTSKKVEVILNQSVTLNTISDGLIETSSGETIDTDCHFMCTGKAMASSWLRETILK 247
L VE V++ +S G + SSGE + C G M +S L E L
Sbjct: 208 IEQALLDNGVET--RTGVSVAAVSPGGVTLSSGERLAAATVVWCAG--MRASRLTEQ-LP 262
Query: 248 DSLDGRGRLMVDENLRVRGFKNVFAIGDI 276
+ D GRL VD+ LRV G +FA GD+
Sbjct: 263 VARDRLGRLQVDDYLRVIGVPAMFAAGDV 291
>sp|Q07946|BEDA_PSEPU Benzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit
OS=Pseudomonas putida GN=bedA PE=1 SV=1
Length = 410
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 130/309 (42%), Gaps = 39/309 (12%)
Query: 19 VVVIGGGVGGSLLAYHIQSFA---DVVLIDEKEYFEITWASL-RAVVEPSFAVRSVINHG 74
V +IG GV G A +++ + LI E+++ SL +AV++ SF +
Sbjct: 5 VAIIGNGVAGFTTAQALRAEGYEGRISLIGEEQHLPYDRPSLSKAVLDGSFEQPPRLAEA 64
Query: 75 DYLSNVKIVVSTAVSITDTE-----VVTAGGQTFVYDYVVVATG---HVESVPKSRTE-- 124
D+ S I + T +TD + + G T D +V+ATG + S+P S+
Sbjct: 65 DWYSEASIEMLTGSEVTDLDTQKKMISLNDGSTISADAIVIATGSRARMLSLPGSQLPGV 124
Query: 125 -RLSQYEKDFEKVKSA----NSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLL-E 178
L Y D + ++ + +LIVGGG G E+A V ++ G +LL
Sbjct: 125 VTLRTY-GDVQLLRDSWTPNTRLLIVGGGLIGCEVA--TTARKLGLSVTILEAGDELLVR 181
Query: 179 FVGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIE---TSSGETIDTDCHFMCTGKA 235
+G R LT + V+V L V+ +G +E + G + D +C G
Sbjct: 182 VLGRRIGAWLRGLLTEQGVQVELKTGVS-GFSGEGQLEKVMVNDGRSFIADNALICVGAD 240
Query: 236 MASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQG------YL-A 288
A R+ L+ R +V ++ K +FA+GD+ P G Y+ A
Sbjct: 241 PADQLARQAGLECD-----RGVVVDHRGATSAKGIFAVGDVATWPLHSGGKRSLETYMNA 295
Query: 289 QKHALVTAK 297
Q+ A AK
Sbjct: 296 QRQATAVAK 304
>sp|Q1JPL4|NDB1_ARATH NAD(P)H dehydrogenase B1, mitochondrial OS=Arabidopsis thaliana
GN=NDB1 PE=1 SV=1
Length = 571
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 55/250 (22%)
Query: 105 YDYVVVATG-------------------HVESVPKSRTERLSQYEKDF------EKVKSA 139
YDY++VA G VE + R + +EK E+ +
Sbjct: 155 YDYLIVAVGAQVNTFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRK 214
Query: 140 NSVLIVGGGPTGVELAGE--------IAVDFPD----KKVILVHRGPKLLEFVGSRASQI 187
+IVGGGPTGVE A E I +P K+ L+ G +L R S
Sbjct: 215 LHFVIVGGGPTGVEFAAELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSF 274
Query: 188 ALDWLTSKKVEVILNQSVTLNTISDGLIET-SSGETIDTDCHFMCTGKAMASSWLRETIL 246
A T ++V V T D ++ SSGE + + + + ++
Sbjct: 275 AEQKFTRDGIDVQTGMRVMSVTDKDITVKVKSSGELVSIPHGLILWSTGVGT----RPVI 330
Query: 247 KDSLD-----GRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLAQKHALVTAKNLKK 301
D ++ GR + +E L+V G +NV+A+GD I AQ+ L N+ K
Sbjct: 331 SDFMEQVGQGGRRAVATNEWLQVTGCENVYAVGDCASI--------AQRKILGDIANIFK 382
Query: 302 LMMGRNKGTM 311
N GT+
Sbjct: 383 AADADNSGTL 392
>sp|Q48KI8|STHA_PSE14 Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=sthA PE=3 SV=1
Length = 464
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 91 TDTEVVTAGG--QTFVYDYVVVATGHVESVPKSRTERLSQYEKDFEKVKSANSVLIVGGG 148
T VV + G + V + +++ATG SR R + + +++ ++++L +G
Sbjct: 122 TSVNVVCSNGVVEKLVANQIIIATG-------SRPYRPADIDFSHKRIYDSDTILSLGHT 174
Query: 149 PTGVELAG------EIAVDFPDKKVI--LVHRGPKLLEFVGSRASQIALDWLTSKKVEVI 200
P + + G E A F V+ LV +LL F+ S SQ ++ V V
Sbjct: 175 PRKLIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEISQALSYHFSNNNVMVR 234
Query: 201 LNQSVT-LNTISDGLI-ETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMV 258
N+ + + +G+I SG+ I D C G+ + L + +GRG++ V
Sbjct: 235 HNEEYERVEGLDNGVILHLKSGKKIKADALLWCNGRTGNTDKLGLENIGLKANGRGQIEV 294
Query: 259 DENLRVRGFKNVFAIGDITDIPEIKQGYLAQ 289
DEN R NV+ GD+ P + Q
Sbjct: 295 DENYRT-SVSNVYGAGDVIGWPSLASAAYDQ 324
>sp|Q3K9F5|STHA_PSEPF Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
fluorescens (strain Pf0-1) GN=sthA PE=3 SV=1
Length = 464
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 20/201 (9%)
Query: 94 EVVTAGG--QTFVYDYVVVATGHVESVPKSRTERLSQYEKDFEKVKSANSVLIVGGGPTG 151
EVV A G + V ++++ATG SR R + + ++ ++++L +G P
Sbjct: 125 EVVCANGVVEKLVAKHIIIATG-------SRPYRPADIDFHHPRIYDSDTILSLGHTPRK 177
Query: 152 VELAG------EIAVDFPDKKVI--LVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQ 203
+ + G E A F V+ LV +LL F+ S SQ ++ + V N+
Sbjct: 178 LIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNE 237
Query: 204 SVT-LNTISDGLI-ETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDEN 261
+ + +G+I SG+ I D C G+ + L + ++ RG++ VDEN
Sbjct: 238 EYDRVEGVDNGVILHLKSGKKIKADALLWCNGRTGNTDQLGLENIGVKVNSRGQIEVDEN 297
Query: 262 LRVRGFKNVFAIGDITDIPEI 282
R +N++ GD+ P +
Sbjct: 298 YRT-CVQNIYGAGDVIGWPSL 317
>sp|C3K4W1|STHA_PSEFS Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
fluorescens (strain SBW25) GN=sthA PE=3 SV=1
Length = 464
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 94 EVVTAGG--QTFVYDYVVVATGHVESVPKSRTERLSQYEKDFEKVKSANSVLIVGGGPTG 151
EVV A G + V ++++ATG SR R + + ++ ++++L +G P
Sbjct: 125 EVVCANGVVEKLVAKHIIIATG-------SRPYRPADIDFHHPRIYDSDTILSLGHTPRK 177
Query: 152 VELAG------EIAVDFPDKKVI--LVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQ 203
+ + G E A F V+ LV +LL F+ S SQ ++ + V N+
Sbjct: 178 LIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEISQALSYHFSNNNITVRHNE 237
Query: 204 SVT-LNTISDGLI-ETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDEN 261
+ + +G+I SG+ I D C G+ + L + ++ RG++ VDEN
Sbjct: 238 EYERVEGLDNGVILHLKSGKKIKADALLWCNGRTGNTDKLGMENIGVKVNSRGQIEVDEN 297
Query: 262 LRVRGFKNVFAIGDITDIPEI 282
R N++ GD+ P +
Sbjct: 298 YRT-CVTNIYGAGDVIGWPSL 317
>sp|O05139|STHA_PSEFL Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
fluorescens GN=sthA PE=1 SV=3
Length = 464
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 94 EVVTAGG--QTFVYDYVVVATGHVESVPKSRTERLSQYEKDFEKVKSANSVLIVGGGPTG 151
EVV A G + V ++++ATG SR R + + ++ ++++L +G P
Sbjct: 125 EVVCANGVVEKLVAKHIIIATG-------SRPYRPADIDFHHPRIYDSDTILSLGHTPRK 177
Query: 152 VELAG------EIAVDFPDKKVI--LVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQ 203
+ + G E A F V+ LV +LL F+ S SQ ++ + V N+
Sbjct: 178 LIIYGAGVIGCEYASIFSGLGVLVELVDNRDQLLSFLDSEISQALSYHFSNNNITVRHNE 237
Query: 204 SVT-LNTISDGLI-ETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDEN 261
+ + +G+I SG+ I D C G+ + L + ++ RG++ VDEN
Sbjct: 238 EYDRVEGLDNGVILHLKSGKKIKADALLWCNGRTGNTDKLGMENIGVKVNSRGQIEVDEN 297
Query: 262 LRVRGFKNVFAIGDITDIPEI 282
R N++ GD+ P +
Sbjct: 298 YRT-CVTNIYGAGDVIGWPSL 317
>sp|A5W4E9|TODA_PSEP1 Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase
component OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=todA PE=1 SV=1
Length = 410
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 117/284 (41%), Gaps = 30/284 (10%)
Query: 19 VVVIGGGVGG--SLLAYHIQSF-ADVVLIDEKEYFEITWASL-RAVVEPSFAVRSVINHG 74
V +IG GVGG + A + F + LI ++ + SL +AV++ S ++
Sbjct: 5 VAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEA 64
Query: 75 DYLSNVKIVVSTAVSITDTEVVTA-----GGQTFVYDYVVVATG---HVESVPKSRTE-- 124
D+ +I + T +T +V T G T D +V+ATG ++P S+
Sbjct: 65 DWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRARTMALPGSQLPGV 124
Query: 125 -RLSQYEKDFEKVK----SANSVLIVGGGPTGVELAGEIAVDFPDKKVILVHRGPKLLEF 179
L Y D + ++ SA +LIVGGG G E+A A IL L+
Sbjct: 125 VTLRTY-GDVQVLRDSWTSATRLLIVGGGLIGCEVA-TTARKLGLSVTILEAGDELLVRV 182
Query: 180 VGSRASQIALDWLTSKKVEVILNQSVTLNTISDGLIE---TSSGETIDTDCHFMCTGKAM 236
+G R LT V+V L V + +G +E S G + D +C G
Sbjct: 183 LGRRIGAWLRGLLTELGVQVELGTGV-VGFSGEGQLEQVMASDGRSFVADSALICVGAEP 241
Query: 237 ASSWLRETILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIP 280
A R+ L R ++ ++ K VFA+GD+ P
Sbjct: 242 ADQLARQAGLACD-----RGVIVDHCGATLAKGVFAVGDVASWP 280
>sp|Q4KFA6|STHA_PSEF5 Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=sthA PE=3
SV=1
Length = 464
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 20/201 (9%)
Query: 94 EVVTAGG--QTFVYDYVVVATGHVESVPKSRTERLSQYEKDFEKVKSANSVLIVGGGPTG 151
EVV A G + V ++++ATG SR R + + ++ ++++L +G P
Sbjct: 125 EVVCANGVVEKLVAKHIIIATG-------SRPYRPADIDFSHPRIYDSDTILSLGHTPRK 177
Query: 152 VELAG------EIAVDFPDKKVI--LVHRGPKLLEFVGSRASQIALDWLTSKKVEVILNQ 203
+ + G E A F V+ LV +LL F+ S SQ ++ + V N+
Sbjct: 178 LIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNE 237
Query: 204 SVT-LNTISDGLI-ETSSGETIDTDCHFMCTGKAMASSWLRETILKDSLDGRGRLMVDEN 261
+ + +G+I SG+ I D C G+ + L + ++ RG++ VDEN
Sbjct: 238 EYDRVEGVDNGVILHLKSGKKIKADALLWCNGRTGNTDKLGMENIGVKVNSRGQIEVDEN 297
Query: 262 LRVRGFKNVFAIGDITDIPEI 282
R N++ GD+ P +
Sbjct: 298 YRT-CVPNIYGAGDVIGWPSL 317
>sp|B6I697|NORW_ECOSE Nitric oxide reductase FlRd-NAD(+) reductase OS=Escherichia coli
(strain SE11) GN=norW PE=3 SV=1
Length = 377
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 102/237 (43%), Gaps = 25/237 (10%)
Query: 79 NVKIVVSTAVSITDTE--VVTAGGQTFVYDYVVVATGHVESVPKSRTERL-------SQY 129
N+++ T V+ D E VV + + YD +V+ATG VP L +Y
Sbjct: 72 NLRLFPHTWVTDIDAEARVVKSQNNQWQYDKLVLATGASAFVPPVPGRELMLTLNSQQEY 131
Query: 130 EKDFEKVKSANSVLIVGGGPTGVELAGEIAVDF--PDKKVILVHRGPKLL-EFVGSRASQ 186
+++ A VLIVGGG G EL A+DF K V L+ +L + S
Sbjct: 132 RACETQLRDARRVLIVGGGLIGSEL----AMDFCRAGKAVTLIDNAASILASLMPPEVSS 187
Query: 187 IALDWLTSKKVEVILNQSVT-LNTISDGLIET-SSGETIDTDCHFMCTGKAMASSWLRET 244
LT V ++L + L G++ T +I+ D TG ++ R
Sbjct: 188 RLQHRLTEMGVHLLLKSQLQGLEKTDSGILATLDRQRSIEVDAVIAATGLRPETALARRA 247
Query: 245 ILKDSLDGRGRLMVDENLRVRGFKNVFAIGDITDIPEIKQGYLA--QKHALVTAKNL 299
L + RG + VD L+ R +++A+GD +I +L Q A+V AKNL
Sbjct: 248 GLTIN---RG-VCVDSYLQTRN-ADIYALGDCAEINGQVLPFLQPIQLSAMVLAKNL 299
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,582,982
Number of Sequences: 539616
Number of extensions: 5388686
Number of successful extensions: 20272
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 371
Number of HSP's that attempted gapping in prelim test: 19860
Number of HSP's gapped (non-prelim): 610
length of query: 368
length of database: 191,569,459
effective HSP length: 119
effective length of query: 249
effective length of database: 127,355,155
effective search space: 31711433595
effective search space used: 31711433595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)